Query 048643
Match_columns 506
No_of_seqs 292 out of 3029
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 20:12:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048643.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048643hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 5.1E-75 1.8E-79 613.5 52.1 462 16-500 2-480 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 1.1E-74 3.6E-79 609.8 48.0 458 20-501 1-474 (475)
3 3vp6_A Glutamate decarboxylase 100.0 2.8E-68 9.6E-73 565.6 56.1 472 19-499 18-506 (511)
4 1js3_A DDC;, DOPA decarboxylas 100.0 6.2E-69 2.1E-73 568.3 49.7 461 20-501 1-477 (486)
5 2okj_A Glutamate decarboxylase 100.0 4E-65 1.4E-69 541.5 52.0 472 18-498 14-502 (504)
6 2jis_A Cysteine sulfinic acid 100.0 5.4E-64 1.9E-68 534.0 51.9 474 13-497 27-514 (515)
7 2qma_A Diaminobutyrate-pyruvat 100.0 5.2E-62 1.8E-66 516.7 49.7 453 19-498 28-496 (497)
8 2dgk_A GAD-beta, GADB, glutama 100.0 4.1E-48 1.4E-52 405.3 36.5 406 54-502 7-438 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 2.5E-45 8.5E-50 388.7 36.4 414 49-504 15-450 (502)
10 3mad_A Sphingosine-1-phosphate 100.0 6.7E-40 2.3E-44 348.5 31.5 391 63-503 69-474 (514)
11 3mc6_A Sphingosine-1-phosphate 100.0 5.7E-40 1.9E-44 347.6 29.5 388 61-501 34-440 (497)
12 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 8.8E-39 3E-43 327.3 22.7 375 63-501 21-446 (450)
13 2z67_A O-phosphoseryl-tRNA(SEC 100.0 7.8E-36 2.7E-40 312.4 29.5 392 19-494 28-454 (456)
14 3f9t_A TDC, L-tyrosine decarbo 100.0 4.2E-34 1.4E-38 292.2 36.6 375 64-496 4-396 (397)
15 1wyu_B Glycine dehydrogenase s 100.0 7.7E-30 2.6E-34 268.2 32.5 387 54-497 31-440 (474)
16 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 2.8E-28 9.5E-33 246.0 29.0 392 57-502 32-465 (501)
17 3nnk_A Ureidoglycine-glyoxylat 100.0 2.5E-27 8.7E-32 243.6 31.0 352 90-499 9-391 (411)
18 3isl_A Purine catabolism prote 100.0 3.4E-27 1.2E-31 243.0 27.5 351 90-499 7-391 (416)
19 1wyu_A Glycine dehydrogenase ( 100.0 9.2E-27 3.1E-31 242.3 30.6 368 53-494 30-436 (438)
20 3kgw_A Alanine-glyoxylate amin 100.0 1.9E-26 6.4E-31 235.4 27.9 350 92-500 21-390 (393)
21 4hvk_A Probable cysteine desul 100.0 2.7E-26 9.2E-31 232.9 28.3 308 124-500 35-375 (382)
22 2dr1_A PH1308 protein, 386AA l 100.0 4.2E-26 1.4E-30 232.4 28.8 347 94-502 21-383 (386)
23 2huf_A Alanine glyoxylate amin 99.9 1.4E-25 4.8E-30 229.3 29.5 348 93-500 18-385 (393)
24 1vjo_A Alanine--glyoxylate ami 99.9 1.3E-25 4.5E-30 229.6 27.8 328 107-495 47-392 (393)
25 3zrp_A Serine-pyruvate aminotr 99.9 5.6E-26 1.9E-30 231.1 23.8 318 127-500 30-365 (384)
26 2z9v_A Aspartate aminotransfer 99.9 6.1E-25 2.1E-29 224.5 31.6 345 92-499 8-372 (392)
27 4eb5_A Probable cysteine desul 99.9 2.4E-25 8.4E-30 226.3 27.4 307 124-500 35-375 (382)
28 2ch1_A 3-hydroxykynurenine tra 99.9 1.2E-25 4.2E-30 229.9 25.1 350 91-499 15-384 (396)
29 2yrr_A Aminotransferase, class 99.9 1.3E-25 4.3E-30 225.6 24.3 335 98-496 4-351 (353)
30 3e9k_A Kynureninase; kynurenin 99.9 1.1E-25 3.8E-30 235.9 23.9 316 129-498 108-461 (465)
31 3lvm_A Cysteine desulfurase; s 99.9 1.4E-24 4.8E-29 224.2 31.7 338 94-500 24-401 (423)
32 3ffr_A Phosphoserine aminotran 99.9 7E-26 2.4E-30 228.5 21.3 337 95-495 5-361 (362)
33 1iug_A Putative aspartate amin 99.9 3.3E-25 1.1E-29 222.8 25.5 331 99-499 6-349 (352)
34 1eg5_A Aminotransferase; PLP-d 99.9 5.4E-24 1.8E-28 216.4 30.6 306 128-502 40-380 (384)
35 3f0h_A Aminotransferase; RER07 99.9 1.1E-24 3.7E-29 221.3 25.1 335 98-496 23-372 (376)
36 1t3i_A Probable cysteine desul 99.9 3.8E-24 1.3E-28 220.3 26.8 316 131-500 71-415 (420)
37 1m32_A 2-aminoethylphosphonate 99.9 3.9E-24 1.3E-28 215.8 26.3 308 132-496 37-363 (366)
38 1svv_A Threonine aldolase; str 99.9 5.2E-24 1.8E-28 214.5 26.4 316 108-498 29-358 (359)
39 1kmj_A Selenocysteine lyase; p 99.9 1.2E-23 4E-28 215.6 27.7 315 130-498 65-405 (406)
40 3dzz_A Putative pyridoxal 5'-p 99.9 3.6E-24 1.2E-28 218.5 23.8 328 108-498 44-389 (391)
41 3vax_A Putative uncharacterize 99.9 1.1E-24 3.9E-29 223.1 19.8 345 92-496 20-398 (400)
42 2bkw_A Alanine-glyoxylate amin 99.9 7E-24 2.4E-28 215.8 24.2 350 93-497 4-383 (385)
43 1j32_A Aspartate aminotransfer 99.9 7.2E-24 2.5E-28 216.4 23.9 325 108-498 47-387 (388)
44 1elu_A L-cysteine/L-cystine C- 99.9 3.2E-24 1.1E-28 218.7 20.7 309 131-494 58-388 (390)
45 3cai_A Possible aminotransfera 99.9 7.5E-24 2.6E-28 217.5 23.2 306 124-494 61-405 (406)
46 1v72_A Aldolase; PLP-dependent 99.9 3.5E-24 1.2E-28 215.6 19.8 296 131-498 42-353 (356)
47 2w8t_A SPT, serine palmitoyltr 99.9 1.1E-22 3.7E-27 210.8 31.3 298 131-504 108-421 (427)
48 1xi9_A Putative transaminase; 99.9 3.3E-23 1.1E-27 213.1 24.8 324 109-499 59-404 (406)
49 3tqx_A 2-amino-3-ketobutyrate 99.9 2.1E-22 7.3E-27 205.9 29.4 295 131-498 87-396 (399)
50 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 6.2E-24 2.1E-28 215.2 16.8 295 131-498 52-370 (371)
51 1gd9_A Aspartate aminotransfer 99.9 6.2E-23 2.1E-27 209.5 23.9 323 108-497 43-385 (389)
52 1qz9_A Kynureninase; kynurenin 99.9 1.3E-22 4.4E-27 209.0 26.4 307 132-499 71-403 (416)
53 2gb3_A Aspartate aminotransfer 99.9 5.1E-23 1.7E-27 211.9 23.1 319 109-500 61-404 (409)
54 3a9z_A Selenocysteine lyase; P 99.9 1.2E-22 4.3E-27 210.3 25.2 350 93-499 19-429 (432)
55 1o4s_A Aspartate aminotransfer 99.9 9.6E-23 3.3E-27 208.4 23.8 317 107-495 57-386 (389)
56 3nra_A Aspartate aminotransfer 99.9 3.6E-23 1.2E-27 212.4 20.4 310 123-498 73-405 (407)
57 1c7n_A Cystalysin; transferase 99.9 2.1E-22 7.2E-27 206.3 25.6 328 108-501 48-396 (399)
58 4dq6_A Putative pyridoxal phos 99.9 2.5E-22 8.5E-27 204.8 25.8 320 108-495 49-390 (391)
59 3l8a_A METC, putative aminotra 99.9 1E-22 3.4E-27 210.6 20.9 324 109-496 79-420 (421)
60 2zc0_A Alanine glyoxylate tran 99.9 9.7E-22 3.3E-26 201.9 28.1 329 106-500 51-406 (407)
61 3e77_A Phosphoserine aminotran 99.9 8.2E-23 2.8E-27 206.8 18.9 333 100-497 20-374 (377)
62 1fc4_A 2-amino-3-ketobutyrate 99.9 1.7E-21 5.9E-26 199.6 28.7 294 132-499 90-398 (401)
63 3ke3_A Putative serine-pyruvat 99.9 7.8E-22 2.7E-26 201.1 25.9 317 126-499 29-377 (379)
64 3m5u_A Phosphoserine aminotran 99.9 1.1E-22 3.6E-27 205.3 19.0 333 94-497 5-359 (361)
65 3piu_A 1-aminocyclopropane-1-c 99.9 9.6E-22 3.3E-26 204.0 26.8 321 124-499 82-433 (435)
66 1iay_A ACC synthase 2, 1-amino 99.9 3E-21 1E-25 199.8 29.9 319 124-496 79-425 (428)
67 3dyd_A Tyrosine aminotransfera 99.9 5.3E-22 1.8E-26 205.6 24.0 333 107-499 74-425 (427)
68 1d2f_A MALY protein; aminotran 99.9 1.9E-21 6.6E-26 198.6 27.5 325 108-498 45-389 (390)
69 3a2b_A Serine palmitoyltransfe 99.9 1.2E-21 4.1E-26 200.7 25.9 294 129-498 85-392 (398)
70 2vyc_A Biodegradative arginine 99.9 5E-22 1.7E-26 218.6 24.4 234 136-411 209-466 (755)
71 1rv3_A Serine hydroxymethyltra 99.9 1E-22 3.4E-27 214.3 17.8 319 124-497 82-430 (483)
72 3frk_A QDTB; aminotransferase, 99.9 6.2E-23 2.1E-27 208.5 15.2 313 109-496 19-366 (373)
73 3h14_A Aminotransferase, class 99.9 4.1E-21 1.4E-25 196.2 28.7 322 108-501 48-385 (391)
74 3kki_A CAI-1 autoinducer synth 99.9 4.4E-21 1.5E-25 197.3 29.0 286 133-497 105-403 (409)
75 3kax_A Aminotransferase, class 99.9 1E-21 3.4E-26 199.8 23.9 321 108-495 41-382 (383)
76 2fnu_A Aminotransferase; prote 99.9 5.5E-22 1.9E-26 201.1 21.5 303 136-498 36-372 (375)
77 3uwc_A Nucleotide-sugar aminot 99.9 2.9E-22 9.9E-27 203.3 19.4 314 109-497 21-370 (374)
78 3tcm_A Alanine aminotransferas 99.9 8.3E-21 2.8E-25 200.6 31.0 324 120-500 126-496 (500)
79 1b9h_A AHBA synthase, protein 99.9 4.9E-21 1.7E-25 195.4 28.2 311 123-497 33-387 (388)
80 1u08_A Hypothetical aminotrans 99.9 7.9E-22 2.7E-26 201.2 20.9 321 108-493 47-385 (386)
81 1vp4_A Aminotransferase, putat 99.9 3.7E-21 1.3E-25 199.0 26.2 332 106-502 60-422 (425)
82 2x3l_A ORN/Lys/Arg decarboxyla 99.9 8.8E-23 3E-27 212.6 13.6 286 132-498 57-353 (446)
83 2o0r_A RV0858C (N-succinyldiam 99.9 4.6E-22 1.6E-26 204.8 18.7 327 108-498 42-396 (411)
84 3op7_A Aminotransferase class 99.9 3.3E-22 1.1E-26 203.1 17.3 305 121-500 56-373 (375)
85 1bw0_A TAT, protein (tyrosine 99.9 1.4E-21 5E-26 201.3 22.2 321 123-499 70-414 (416)
86 1v2d_A Glutamine aminotransfer 99.9 1.3E-21 4.3E-26 199.3 21.2 315 108-500 42-373 (381)
87 3ly1_A Putative histidinol-pho 99.9 1.6E-20 5.5E-25 189.0 29.1 286 135-496 54-350 (354)
88 2c81_A Glutamine-2-deoxy-scyll 99.9 1.5E-21 5.2E-26 201.5 21.7 315 131-498 41-414 (418)
89 3cq5_A Histidinol-phosphate am 99.9 2.1E-20 7.2E-25 189.5 29.6 288 130-495 71-365 (369)
90 3aow_A Putative uncharacterize 99.9 2.5E-20 8.6E-25 194.2 30.8 330 106-500 93-447 (448)
91 3ffh_A Histidinol-phosphate am 99.9 1.2E-20 4E-25 190.8 27.2 281 136-494 71-362 (363)
92 1c4k_A Protein (ornithine deca 99.9 2.4E-21 8.1E-26 211.5 23.4 319 136-499 177-567 (730)
93 2z61_A Probable aspartate amin 99.9 4.6E-21 1.6E-25 194.4 23.9 308 108-495 46-368 (370)
94 3qm2_A Phosphoserine aminotran 99.9 1.9E-22 6.4E-27 205.2 12.8 299 127-497 67-384 (386)
95 2dkj_A Serine hydroxymethyltra 99.9 1.3E-21 4.3E-26 200.8 18.9 300 128-497 65-387 (407)
96 1b5p_A Protein (aspartate amin 99.9 4.9E-21 1.7E-25 195.4 22.8 318 109-495 49-382 (385)
97 3dr4_A Putative perosamine syn 99.9 9.3E-22 3.2E-26 201.1 17.4 302 126-494 54-389 (391)
98 3ele_A Amino transferase; RER0 99.9 9.5E-21 3.2E-25 193.9 24.9 305 123-498 71-396 (398)
99 3g0t_A Putative aminotransfera 99.9 7.9E-21 2.7E-25 197.0 24.3 315 122-497 76-436 (437)
100 2x5d_A Probable aminotransfera 99.9 1.3E-20 4.5E-25 193.9 25.6 329 107-499 53-399 (412)
101 3euc_A Histidinol-phosphate am 99.9 4.7E-21 1.6E-25 194.0 21.7 282 136-495 71-365 (367)
102 1yiz_A Kynurenine aminotransfe 99.9 4E-21 1.4E-25 198.9 21.5 333 108-495 54-426 (429)
103 1bs0_A Protein (8-amino-7-oxon 99.9 1.3E-20 4.5E-25 191.9 24.7 285 132-494 84-383 (384)
104 2zyj_A Alpha-aminodipate amino 99.9 1.1E-20 3.8E-25 193.4 24.1 319 106-500 49-395 (397)
105 2cb1_A O-acetyl homoserine sul 99.9 2.7E-20 9.4E-25 191.8 26.4 293 133-493 57-411 (412)
106 2a7v_A Serine hydroxymethyltra 99.9 1.4E-20 4.7E-25 197.0 23.8 309 126-497 94-440 (490)
107 2oga_A Transaminase; PLP-depen 99.9 5.7E-21 1.9E-25 196.0 20.3 316 109-498 46-396 (399)
108 2fyf_A PSAT, phosphoserine ami 99.9 4.8E-21 1.6E-25 196.4 19.3 336 93-497 39-397 (398)
109 3fdb_A Beta C-S lyase, putativ 99.9 6.8E-21 2.3E-25 193.3 20.2 315 109-497 41-375 (377)
110 3get_A Histidinol-phosphate am 99.9 7.5E-20 2.6E-24 184.9 27.8 282 136-495 69-364 (365)
111 2vi8_A Serine hydroxymethyltra 99.9 4.8E-21 1.6E-25 196.4 19.0 304 126-499 63-388 (405)
112 2bwn_A 5-aminolevulinate synth 99.9 9.8E-20 3.3E-24 186.6 28.5 294 134-498 93-400 (401)
113 3n0l_A Serine hydroxymethyltra 99.9 2.9E-20 1E-24 191.3 23.3 304 125-497 64-388 (417)
114 2c0r_A PSAT, phosphoserine ami 99.9 3.2E-20 1.1E-24 187.5 22.6 300 127-497 44-360 (362)
115 3ezs_A Aminotransferase ASPB; 99.9 1.5E-19 5E-24 183.5 27.2 312 107-496 39-373 (376)
116 3ihj_A Alanine aminotransferas 99.9 1.6E-19 5.5E-24 190.6 28.4 328 121-500 122-495 (498)
117 2rfv_A Methionine gamma-lyase; 99.9 2E-20 6.8E-25 191.9 20.7 281 131-494 63-396 (398)
118 3b46_A Aminotransferase BNA3; 99.9 7.4E-21 2.5E-25 198.2 17.7 339 106-494 72-443 (447)
119 1mdo_A ARNB aminotransferase; 99.9 4.1E-20 1.4E-24 188.7 22.6 307 126-498 37-386 (393)
120 2dou_A Probable N-succinyldiam 99.9 7.4E-20 2.5E-24 185.8 24.2 316 108-494 42-374 (376)
121 3ftb_A Histidinol-phosphate am 99.8 1.7E-19 5.8E-24 181.9 25.8 281 136-497 65-360 (361)
122 3lws_A Aromatic amino acid bet 99.8 1.5E-19 5E-24 182.2 25.2 325 92-494 11-355 (357)
123 3fvs_A Kynurenine--oxoglutarat 99.8 3.3E-20 1.1E-24 191.4 20.7 336 108-497 45-421 (422)
124 2o1b_A Aminotransferase, class 99.8 2.4E-20 8.3E-25 191.6 19.2 320 108-496 64-401 (404)
125 1jg8_A L-ALLO-threonine aldola 99.8 4E-20 1.4E-24 185.6 19.9 298 123-498 33-346 (347)
126 3gbx_A Serine hydroxymethyltra 99.8 2.2E-20 7.7E-25 192.2 18.4 301 129-497 73-395 (420)
127 3nyt_A Aminotransferase WBPE; 99.8 8.8E-21 3E-25 192.3 14.8 310 109-494 18-360 (367)
128 1e5e_A MGL, methionine gamma-l 99.8 2.5E-19 8.4E-24 184.2 25.1 276 136-501 66-398 (404)
129 1w23_A Phosphoserine aminotran 99.8 1.4E-20 4.9E-25 189.7 15.5 302 127-497 43-359 (360)
130 3qhx_A Cystathionine gamma-syn 99.8 2.2E-19 7.4E-24 183.9 24.2 213 135-413 69-287 (392)
131 1lc5_A COBD, L-threonine-O-3-p 99.8 3.1E-19 1.1E-23 180.5 25.0 307 109-498 42-360 (364)
132 1o69_A Aminotransferase; struc 99.8 3.5E-19 1.2E-23 182.3 25.6 316 127-496 31-385 (394)
133 1gc0_A Methionine gamma-lyase; 99.8 1.6E-19 5.6E-24 185.1 22.6 213 134-411 67-285 (398)
134 3jtx_A Aminotransferase; NP_28 99.8 6.2E-19 2.1E-23 180.1 26.2 321 108-494 47-394 (396)
135 3ecd_A Serine hydroxymethyltra 99.8 1.8E-19 6.3E-24 185.6 22.3 301 131-498 77-397 (425)
136 3b8x_A WBDK, pyridoxamine 5-ph 99.8 8.4E-19 2.9E-23 179.1 26.8 313 124-491 30-389 (390)
137 3ju7_A Putative PLP-dependent 99.8 4.5E-19 1.6E-23 180.5 24.6 303 127-496 35-373 (377)
138 2x5f_A Aspartate_tyrosine_phen 99.8 3E-19 1E-23 184.8 23.6 310 122-498 82-429 (430)
139 1ax4_A Tryptophanase; tryptoph 99.8 2.6E-19 8.9E-24 187.3 23.2 326 123-499 71-442 (467)
140 1vef_A Acetylornithine/acetyl- 99.8 4.6E-19 1.6E-23 181.2 24.3 287 132-495 87-394 (395)
141 3hdo_A Histidinol-phosphate am 99.8 2.8E-19 9.7E-24 180.5 22.3 277 136-496 69-353 (360)
142 1fg7_A Histidinol phosphate am 99.8 5.7E-19 2E-23 178.2 24.5 274 137-493 63-353 (356)
143 2po3_A 4-dehydrase; external a 99.8 1.1E-18 3.7E-23 180.4 27.0 319 107-498 32-386 (424)
144 3e2y_A Kynurenine-oxoglutarate 99.8 2.1E-19 7.1E-24 184.6 20.4 334 107-493 39-408 (410)
145 2ez2_A Beta-tyrosinase, tyrosi 99.8 5.2E-18 1.8E-22 176.9 31.3 314 123-499 70-432 (456)
146 3p1t_A Putative histidinol-pho 99.8 8.2E-18 2.8E-22 167.8 29.6 278 127-495 50-334 (337)
147 1qgn_A Protein (cystathionine 99.8 8.8E-19 3E-23 181.7 23.1 276 135-497 117-444 (445)
148 3rq1_A Aminotransferase class 99.8 3.2E-18 1.1E-22 176.4 27.1 327 106-499 58-416 (418)
149 3ri6_A O-acetylhomoserine sulf 99.8 3.8E-19 1.3E-23 183.8 20.1 229 126-413 80-323 (430)
150 3fsl_A Aromatic-amino-acid ami 99.8 1.2E-18 4.2E-23 178.0 23.4 321 107-494 47-396 (397)
151 2r2n_A Kynurenine/alpha-aminoa 99.8 3.6E-18 1.2E-22 176.6 26.7 319 124-498 74-424 (425)
152 3pj0_A LMO0305 protein; struct 99.8 2.3E-18 8E-23 173.4 24.7 294 124-493 44-357 (359)
153 1cs1_A CGS, protein (cystathio 99.8 5E-18 1.7E-22 173.2 27.2 278 126-494 50-383 (386)
154 1pff_A Methionine gamma-lyase; 99.8 1.7E-18 5.7E-23 172.7 22.3 271 137-494 3-330 (331)
155 2oqx_A Tryptophanase; lyase, p 99.8 2.9E-18 1E-22 179.3 24.5 348 94-499 42-443 (467)
156 4f4e_A Aromatic-amino-acid ami 99.8 1.3E-18 4.4E-23 179.6 21.1 322 107-495 70-419 (420)
157 3if2_A Aminotransferase; YP_26 99.8 1.9E-18 6.3E-23 179.6 21.8 314 123-500 78-442 (444)
158 3qgu_A LL-diaminopimelate amin 99.8 8.6E-18 2.9E-22 174.9 26.5 300 122-497 105-439 (449)
159 3b1d_A Betac-S lyase; HET: PLP 99.7 3.2E-21 1.1E-25 197.3 0.0 325 109-496 49-391 (392)
160 2ctz_A O-acetyl-L-homoserine s 99.8 5.8E-18 2E-22 174.9 24.3 239 126-413 56-312 (421)
161 3t18_A Aminotransferase class 99.8 6.8E-18 2.3E-22 173.6 24.8 343 87-499 39-411 (413)
162 1ajs_A Aspartate aminotransfer 99.8 1.7E-18 5.8E-23 178.0 20.2 321 107-498 51-411 (412)
163 3acz_A Methionine gamma-lyase; 99.8 4.6E-18 1.6E-22 173.8 23.2 210 135-410 62-277 (389)
164 3h7f_A Serine hydroxymethyltra 99.8 2E-18 7E-23 179.7 20.7 301 128-497 87-413 (447)
165 2ord_A Acoat, acetylornithine 99.8 3.9E-18 1.3E-22 174.5 22.2 293 132-497 82-396 (397)
166 3ruy_A Ornithine aminotransfer 99.8 1.1E-17 3.8E-22 170.8 24.4 291 133-495 79-391 (392)
167 4adb_A Succinylornithine trans 99.8 1.4E-17 4.8E-22 170.7 25.2 297 132-501 81-403 (406)
168 3n75_A LDC, lysine decarboxyla 99.8 1.4E-17 4.6E-22 180.5 26.1 229 137-410 200-443 (715)
169 2eh6_A Acoat, acetylornithine 99.8 2.2E-17 7.5E-22 167.3 26.1 283 135-494 73-374 (375)
170 7aat_A Aspartate aminotransfer 99.8 9E-18 3.1E-22 172.0 23.2 305 121-495 64-400 (401)
171 1yaa_A Aspartate aminotransfer 99.8 3.9E-18 1.3E-22 175.4 20.4 319 107-497 50-410 (412)
172 3ndn_A O-succinylhomoserine su 99.8 3E-18 1E-22 176.5 19.4 214 134-413 83-302 (414)
173 1sff_A 4-aminobutyrate aminotr 99.8 1.2E-16 4E-21 164.9 31.4 312 134-498 86-424 (426)
174 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.2E-17 4E-22 173.4 22.9 319 124-495 58-433 (437)
175 2ay1_A Aroat, aromatic amino a 99.8 1.7E-17 5.8E-22 169.4 22.9 312 108-494 48-392 (394)
176 3ei9_A LL-diaminopimelate amin 99.8 1.5E-17 5.1E-22 172.2 22.3 300 123-496 93-426 (432)
177 3cog_A Cystathionine gamma-lya 99.8 1.5E-17 5E-22 170.8 21.3 213 126-409 65-284 (403)
178 3g7q_A Valine-pyruvate aminotr 99.8 5.9E-18 2E-22 174.1 18.2 331 107-500 49-415 (417)
179 2pb2_A Acetylornithine/succiny 99.8 5E-17 1.7E-21 167.8 24.9 300 131-499 98-419 (420)
180 3dxv_A Alpha-amino-epsilon-cap 99.8 1.7E-16 5.7E-21 164.7 29.0 314 130-500 84-427 (439)
181 2fq6_A Cystathionine beta-lyas 99.8 8.5E-18 2.9E-22 173.0 18.9 282 126-493 80-413 (415)
182 3meb_A Aspartate aminotransfer 99.8 2.6E-16 9E-21 163.8 30.3 356 71-498 35-444 (448)
183 3nx3_A Acoat, acetylornithine 99.8 2.1E-16 7.2E-21 161.5 28.5 296 131-497 77-394 (395)
184 3fkd_A L-threonine-O-3-phospha 99.8 8.8E-17 3E-21 161.5 25.2 274 136-496 54-340 (350)
185 3ez1_A Aminotransferase MOCR f 99.8 3.7E-17 1.3E-21 168.7 22.8 309 125-500 67-417 (423)
186 3ppl_A Aspartate aminotransfer 99.8 4.6E-17 1.6E-21 168.3 23.5 311 123-499 73-421 (427)
187 2q7w_A Aspartate aminotransfer 99.8 2.3E-17 7.8E-22 168.5 20.0 313 109-494 49-395 (396)
188 2eo5_A 419AA long hypothetical 99.8 5.4E-16 1.8E-20 159.9 29.8 294 133-498 87-418 (419)
189 1n8p_A Cystathionine gamma-lya 99.8 1.6E-17 5.4E-22 170.1 18.0 276 135-495 58-392 (393)
190 2aeu_A Hypothetical protein MJ 99.8 2.2E-17 7.4E-22 167.9 18.8 294 131-500 57-373 (374)
191 1ibj_A CBL, cystathionine beta 99.8 1.4E-17 4.7E-22 173.9 17.4 158 133-334 134-297 (464)
192 1z7d_A Ornithine aminotransfer 99.8 3.8E-16 1.3E-20 161.8 28.1 299 132-498 107-429 (433)
193 3d6k_A Putative aminotransfera 99.7 1.6E-16 5.5E-21 164.0 24.1 311 123-500 71-420 (422)
194 1s0a_A Adenosylmethionine-8-am 99.7 8.9E-16 3E-20 158.7 29.7 303 134-498 88-424 (429)
195 3i4j_A Aminotransferase, class 99.7 6.1E-16 2.1E-20 160.0 27.4 320 131-498 71-428 (430)
196 3dod_A Adenosylmethionine-8-am 99.7 2.9E-15 1E-19 155.8 32.2 324 131-502 86-447 (448)
197 3f6t_A Aspartate aminotransfer 99.7 1.5E-16 5E-21 169.3 22.6 360 105-500 117-527 (533)
198 1uu1_A Histidinol-phosphate am 99.7 3.7E-16 1.3E-20 156.0 24.3 269 129-493 57-333 (335)
199 2oat_A Ornithine aminotransfer 99.7 6.8E-16 2.3E-20 160.2 26.5 297 134-497 120-438 (439)
200 3i5t_A Aminotransferase; pyrid 99.7 4.2E-15 1.4E-19 155.9 32.6 326 130-500 95-456 (476)
201 3i16_A Aluminum resistance pro 99.7 2.7E-16 9.3E-21 161.8 23.0 232 129-422 74-340 (427)
202 3a8u_X Omega-amino acid--pyruv 99.7 2.8E-15 9.5E-20 156.0 30.9 319 132-498 93-447 (449)
203 3nmy_A Xometc, cystathionine g 99.7 1.7E-16 6E-21 162.5 21.3 217 126-413 65-289 (400)
204 4eu1_A Mitochondrial aspartate 99.7 6E-16 2E-20 158.9 25.1 311 113-495 64-408 (409)
205 3asa_A LL-diaminopimelate amin 99.7 8.8E-17 3E-21 164.7 18.4 299 123-499 70-394 (400)
206 3jzl_A Putative cystathionine 99.7 3.1E-16 1.1E-20 160.8 21.4 225 138-422 65-323 (409)
207 3gju_A Putative aminotransfera 99.7 8.4E-15 2.9E-19 152.9 32.1 328 131-500 94-458 (460)
208 3hmu_A Aminotransferase, class 99.7 5.8E-15 2E-19 154.6 30.8 322 131-498 98-452 (472)
209 1zod_A DGD, 2,2-dialkylglycine 99.7 1.5E-15 5.2E-20 157.1 25.4 313 132-498 85-432 (433)
210 3n5m_A Adenosylmethionine-8-am 99.7 6.7E-15 2.3E-19 153.2 30.1 323 130-496 89-450 (452)
211 4a6r_A Omega transaminase; tra 99.7 8.6E-15 2.9E-19 152.8 30.5 320 131-499 93-450 (459)
212 3tfu_A Adenosylmethionine-8-am 99.7 2.1E-15 7.3E-20 157.3 25.5 310 132-500 118-455 (457)
213 3hvy_A Cystathionine beta-lyas 99.7 8.6E-16 2.9E-20 158.1 21.8 226 138-422 80-340 (427)
214 4ffc_A 4-aminobutyrate aminotr 99.7 1.5E-14 5.3E-19 150.6 29.5 319 130-500 105-451 (453)
215 3oks_A 4-aminobutyrate transam 99.7 1.4E-14 4.7E-19 150.9 29.1 314 130-496 102-449 (451)
216 3k28_A Glutamate-1-semialdehyd 99.7 7E-15 2.4E-19 152.0 25.5 305 133-498 94-427 (429)
217 3ht4_A Aluminum resistance pro 99.7 6.5E-16 2.2E-20 159.6 17.4 231 134-422 67-329 (431)
218 2cjg_A L-lysine-epsilon aminot 99.7 7.6E-15 2.6E-19 152.8 24.9 308 132-498 101-448 (449)
219 3l44_A Glutamate-1-semialdehyd 99.7 1.9E-14 6.6E-19 148.8 26.2 304 133-500 96-432 (434)
220 1ohv_A 4-aminobutyrate aminotr 99.7 2E-14 6.8E-19 150.5 26.5 310 130-498 108-471 (472)
221 2epj_A Glutamate-1-semialdehyd 99.6 6.7E-14 2.3E-18 144.8 28.7 306 131-499 95-432 (434)
222 3fq8_A Glutamate-1-semialdehyd 99.6 1.3E-13 4.3E-18 142.4 29.8 305 130-497 90-426 (427)
223 2cy8_A D-phgat, D-phenylglycin 99.6 6.8E-14 2.3E-18 145.7 27.5 308 130-501 95-438 (453)
224 4e77_A Glutamate-1-semialdehyd 99.6 3.8E-13 1.3E-17 138.9 29.9 302 132-496 93-427 (429)
225 3k7y_A Aspartate aminotransfer 99.6 5.5E-14 1.9E-18 144.1 19.7 321 106-497 49-404 (405)
226 3bwn_A AT1G70560, L-tryptophan 99.6 2.6E-13 8.9E-18 138.5 22.3 288 122-497 57-386 (391)
227 2zy4_A L-aspartate beta-decarb 99.6 1.1E-13 3.9E-18 147.2 20.0 346 123-499 133-523 (546)
228 2e7u_A Glutamate-1-semialdehyd 99.5 1.8E-12 6E-17 133.7 27.3 301 131-494 91-423 (424)
229 3ou5_A Serine hydroxymethyltra 99.5 5.6E-13 1.9E-17 134.3 22.3 308 124-495 92-438 (490)
230 4ao9_A Beta-phenylalanine amin 99.5 6E-12 2E-16 130.0 25.7 303 132-499 127-447 (454)
231 4h51_A Aspartate aminotransfer 99.4 3.3E-12 1.1E-16 131.1 19.9 325 109-501 67-420 (420)
232 2hox_A ALLIIN lyase 1; cystein 99.4 2.9E-12 1E-16 132.3 14.9 285 130-495 102-422 (427)
233 4e3q_A Pyruvate transaminase; 99.3 6.7E-10 2.3E-14 115.5 29.5 327 131-501 110-471 (473)
234 4atq_A 4-aminobutyrate transam 99.3 3E-09 1E-13 110.2 32.4 313 133-497 108-454 (456)
235 2yky_A Beta-transaminase; tran 98.9 3.9E-13 1.3E-17 139.7 0.0 304 131-499 139-461 (465)
236 4a0g_A Adenosylmethionine-8-am 99.1 2.7E-09 9.4E-14 118.3 20.3 323 136-498 428-828 (831)
237 4fgs_A Probable dehydrogenase 71.9 21 0.00071 33.4 10.0 67 193-268 56-122 (273)
238 3m0z_A Putative aldolase; MCSG 71.3 19 0.00066 32.4 8.7 71 201-284 144-217 (249)
239 4g81_D Putative hexonate dehyd 67.5 40 0.0014 31.1 10.8 67 193-267 35-104 (255)
240 3m6y_A 4-hydroxy-2-oxoglutarat 63.6 24 0.00081 32.2 7.8 70 202-284 168-240 (275)
241 1tks_A 3,4-dihydroxy-2-butanon 62.8 13 0.00044 33.0 5.9 51 233-283 143-193 (204)
242 3cpr_A Dihydrodipicolinate syn 62.6 12 0.0004 35.8 6.2 58 227-284 30-90 (304)
243 3dz1_A Dihydrodipicolinate syn 62.4 10 0.00034 36.4 5.7 58 227-284 22-81 (313)
244 3l21_A DHDPS, dihydrodipicolin 62.4 10 0.00035 36.2 5.7 58 227-284 29-89 (304)
245 1f6k_A N-acetylneuraminate lya 60.5 12 0.00042 35.4 5.9 58 227-284 17-78 (293)
246 3grp_A 3-oxoacyl-(acyl carrier 58.8 57 0.0019 29.9 10.2 60 200-267 60-119 (266)
247 2wkj_A N-acetylneuraminate lya 58.0 6.8 0.00023 37.4 3.6 58 227-284 25-85 (303)
248 3mio_A DHBP synthase, 3,4-dihy 56.8 25 0.00085 31.3 6.7 51 233-283 142-193 (206)
249 1xky_A Dihydrodipicolinate syn 56.6 4.6 0.00016 38.6 2.1 58 227-284 26-86 (301)
250 3flu_A DHDPS, dihydrodipicolin 55.3 11 0.00038 35.8 4.6 58 227-284 21-81 (297)
251 3na8_A Putative dihydrodipicol 55.2 9.5 0.00033 36.6 4.2 59 226-284 37-98 (315)
252 4dpp_A DHDPS 2, dihydrodipicol 55.2 16 0.00054 35.7 5.7 58 227-284 73-133 (360)
253 3b4u_A Dihydrodipicolinate syn 54.7 12 0.0004 35.6 4.6 52 227-278 17-68 (294)
254 3fkr_A L-2-keto-3-deoxyarabona 54.6 10 0.00035 36.3 4.2 57 228-284 23-82 (309)
255 3rwb_A TPLDH, pyridoxal 4-dehy 54.6 59 0.002 29.3 9.5 65 194-266 33-97 (247)
256 4dqx_A Probable oxidoreductase 53.7 70 0.0024 29.5 10.0 65 193-266 54-118 (277)
257 2r8w_A AGR_C_1641P; APC7498, d 53.7 13 0.00043 36.0 4.8 58 227-284 48-108 (332)
258 2ojp_A DHDPS, dihydrodipicolin 53.6 11 0.00037 35.7 4.2 57 227-283 15-74 (292)
259 3si9_A DHDPS, dihydrodipicolin 53.5 10 0.00035 36.4 4.0 58 227-284 36-96 (315)
260 3tak_A DHDPS, dihydrodipicolin 53.5 11 0.00037 35.7 4.2 58 227-284 15-75 (291)
261 3qze_A DHDPS, dihydrodipicolin 53.2 11 0.00039 36.0 4.3 58 227-284 37-97 (314)
262 3s5o_A 4-hydroxy-2-oxoglutarat 53.1 12 0.0004 35.8 4.4 58 227-284 28-88 (307)
263 3gvc_A Oxidoreductase, probabl 52.8 65 0.0022 29.7 9.6 65 193-266 56-120 (277)
264 4e6p_A Probable sorbitol dehyd 51.9 86 0.0029 28.4 10.2 64 193-265 35-98 (259)
265 1qwg_A PSL synthase;, (2R)-pho 51.7 29 0.00099 31.9 6.5 77 202-287 88-169 (251)
266 1w3i_A EDA, 2-keto-3-deoxy glu 51.1 12 0.00042 35.4 4.1 52 227-278 13-64 (293)
267 3lyl_A 3-oxoacyl-(acyl-carrier 50.3 1.3E+02 0.0044 26.8 11.1 49 210-266 51-99 (247)
268 3h5d_A DHDPS, dihydrodipicolin 50.2 11 0.00037 36.1 3.7 58 227-284 21-81 (311)
269 2pju_A Propionate catabolism o 50.1 80 0.0027 28.4 9.3 69 190-282 107-175 (225)
270 2nuw_A 2-keto-3-deoxygluconate 50.1 10 0.00036 35.8 3.5 52 227-278 13-64 (288)
271 4ibo_A Gluconate dehydrogenase 49.9 1.3E+02 0.0043 27.5 11.1 44 217-265 76-119 (271)
272 1g57_A DHBP synthase, 3,4-dihy 49.4 34 0.0012 30.7 6.5 50 233-283 151-200 (217)
273 2hmc_A AGR_L_411P, dihydrodipi 49.4 18 0.00061 35.2 5.0 58 227-284 40-97 (344)
274 3a5f_A Dihydrodipicolinate syn 49.3 16 0.00055 34.5 4.7 56 227-283 16-74 (291)
275 2v9d_A YAGE; dihydrodipicolini 49.2 14 0.00047 36.0 4.2 57 228-284 46-105 (343)
276 4eso_A Putative oxidoreductase 49.1 66 0.0023 29.2 8.9 64 193-265 35-98 (255)
277 3e96_A Dihydrodipicolinate syn 47.9 11 0.00039 36.1 3.4 57 228-284 27-86 (316)
278 3m5v_A DHDPS, dihydrodipicolin 47.9 14 0.00047 35.2 3.9 57 228-284 22-82 (301)
279 3qfe_A Putative dihydrodipicol 47.1 12 0.00042 35.8 3.5 58 227-284 25-85 (318)
280 3d0c_A Dihydrodipicolinate syn 46.4 13 0.00045 35.6 3.5 58 227-284 26-86 (314)
281 3tfo_A Putative 3-oxoacyl-(acy 45.7 1E+02 0.0035 28.2 9.6 45 217-266 54-98 (264)
282 2yxg_A DHDPS, dihydrodipicolin 45.5 16 0.00056 34.4 4.0 57 228-284 15-74 (289)
283 2ehh_A DHDPS, dihydrodipicolin 45.5 18 0.00062 34.2 4.4 57 228-284 15-74 (294)
284 3imf_A Short chain dehydrogena 45.3 1.4E+02 0.0048 26.9 10.5 67 193-265 33-99 (257)
285 1snn_A DHBP synthase, 3,4-dihy 45.1 42 0.0014 30.3 6.4 51 232-283 161-211 (227)
286 3l6e_A Oxidoreductase, short-c 44.9 73 0.0025 28.4 8.4 64 193-265 30-93 (235)
287 3o38_A Short chain dehydrogena 44.8 1.2E+02 0.0041 27.4 10.0 45 216-265 73-117 (266)
288 3h7a_A Short chain dehydrogena 44.2 1.2E+02 0.004 27.4 9.8 43 217-265 57-99 (252)
289 1hxh_A 3BETA/17BETA-hydroxyste 44.0 1.7E+02 0.0057 26.2 10.8 64 193-265 33-96 (253)
290 3op4_A 3-oxoacyl-[acyl-carrier 43.3 97 0.0033 27.8 9.0 58 200-265 42-99 (248)
291 2q5c_A NTRC family transcripti 43.1 60 0.002 28.5 7.2 68 191-282 96-163 (196)
292 2r91_A 2-keto-3-deoxy-(6-phosp 42.7 15 0.00051 34.7 3.3 51 228-278 13-63 (286)
293 3eb2_A Putative dihydrodipicol 42.7 11 0.00038 35.8 2.4 58 227-284 18-78 (300)
294 4dyv_A Short-chain dehydrogena 42.5 1.2E+02 0.0042 27.7 9.7 60 193-261 55-114 (272)
295 3sju_A Keto reductase; short-c 41.0 1.1E+02 0.0038 28.0 9.2 45 217-266 74-118 (279)
296 3oid_A Enoyl-[acyl-carrier-pro 40.5 1.7E+02 0.0058 26.4 10.3 44 217-265 55-98 (258)
297 3h8q_A Thioredoxin reductase 3 40.0 1.3E+02 0.0044 23.3 9.9 73 190-272 17-91 (114)
298 3rih_A Short chain dehydrogena 39.5 1.8E+02 0.0062 26.9 10.5 69 193-267 68-137 (293)
299 1o5k_A DHDPS, dihydrodipicolin 39.3 20 0.00067 34.2 3.5 57 228-284 27-86 (306)
300 3tjr_A Short chain dehydrogena 39.1 1.3E+02 0.0045 27.9 9.5 45 217-266 81-125 (301)
301 3n74_A 3-ketoacyl-(acyl-carrie 38.8 2.1E+02 0.0073 25.5 11.4 60 193-261 36-95 (261)
302 3ezx_A MMCP 1, monomethylamine 38.6 57 0.0019 29.1 6.3 101 191-314 94-203 (215)
303 4fn4_A Short chain dehydrogena 37.9 1.2E+02 0.004 27.8 8.6 48 210-265 53-101 (254)
304 3v8b_A Putative dehydrogenase, 37.8 2E+02 0.0068 26.4 10.4 62 193-260 55-116 (283)
305 2rfg_A Dihydrodipicolinate syn 37.5 18 0.00062 34.3 3.0 51 228-278 15-65 (297)
306 3m1a_A Putative dehydrogenase; 37.1 1.3E+02 0.0044 27.4 8.9 56 202-265 40-95 (281)
307 4gqr_A Pancreatic alpha-amylas 36.8 15 0.00052 37.1 2.4 31 258-288 69-99 (496)
308 1x1t_A D(-)-3-hydroxybutyrate 36.3 2.3E+02 0.0078 25.3 10.5 44 217-265 56-99 (260)
309 2pcq_A Putative dihydrodipicol 35.8 11 0.00036 35.6 1.0 55 228-284 13-67 (283)
310 2jah_A Clavulanic acid dehydro 35.4 2E+02 0.0068 25.6 9.8 45 217-266 57-101 (247)
311 4fc7_A Peroxisomal 2,4-dienoyl 34.9 1.5E+02 0.0052 27.0 9.1 44 217-265 78-121 (277)
312 1zco_A 2-dehydro-3-deoxyphosph 34.6 1.1E+02 0.0037 28.3 7.7 62 231-292 141-205 (262)
313 3tox_A Short chain dehydrogena 34.5 2.7E+02 0.0092 25.4 10.8 62 194-260 35-96 (280)
314 3tpc_A Short chain alcohol deh 34.3 1.2E+02 0.0041 27.3 8.1 53 204-264 44-96 (257)
315 1k4i_A 3,4-dihydroxy-2-butanon 34.0 65 0.0022 29.1 5.7 50 234-283 152-211 (233)
316 2ew8_A (S)-1-phenylethanol deh 33.9 2.3E+02 0.0078 25.2 9.9 65 193-265 34-98 (249)
317 2vc6_A MOSA, dihydrodipicolina 33.8 19 0.00065 34.0 2.4 51 228-278 15-65 (292)
318 3edm_A Short chain dehydrogena 33.8 2.6E+02 0.0089 25.0 10.5 45 217-266 59-104 (259)
319 3daq_A DHDPS, dihydrodipicolin 33.6 28 0.00096 32.8 3.6 57 227-284 17-76 (292)
320 2rhc_B Actinorhodin polyketide 33.6 2.4E+02 0.0083 25.5 10.2 44 217-265 72-115 (277)
321 3ftp_A 3-oxoacyl-[acyl-carrier 33.5 2.4E+02 0.0081 25.6 10.1 49 210-266 74-122 (270)
322 1vl8_A Gluconate 5-dehydrogena 33.2 2.1E+02 0.0072 25.8 9.7 44 217-265 72-115 (267)
323 4dmm_A 3-oxoacyl-[acyl-carrier 32.8 1.7E+02 0.0057 26.6 8.9 44 217-265 79-122 (269)
324 2a4k_A 3-oxoacyl-[acyl carrier 32.7 1.8E+02 0.006 26.3 9.0 64 193-265 33-96 (263)
325 3lf2_A Short chain oxidoreduct 32.2 2.1E+02 0.007 25.8 9.4 45 217-266 60-104 (265)
326 3pk0_A Short-chain dehydrogena 32.0 2.4E+02 0.0081 25.4 9.8 46 216-266 60-105 (262)
327 3ff4_A Uncharacterized protein 31.6 68 0.0023 25.8 5.1 47 232-288 67-113 (122)
328 3u5t_A 3-oxoacyl-[acyl-carrier 31.5 2.5E+02 0.0085 25.4 9.9 44 217-265 78-121 (267)
329 3nvt_A 3-deoxy-D-arabino-heptu 31.5 2E+02 0.0068 28.1 9.4 81 201-291 238-323 (385)
330 1g94_A Alpha-amylase; beta-alp 31.4 21 0.00072 35.9 2.4 30 259-288 58-87 (448)
331 4fs3_A Enoyl-[acyl-carrier-pro 31.2 2.8E+02 0.0095 24.9 10.1 62 193-260 35-97 (256)
332 3ai3_A NADPH-sorbose reductase 31.1 2.5E+02 0.0085 25.1 9.8 44 217-265 58-101 (263)
333 1geg_A Acetoin reductase; SDR 31.0 2.8E+02 0.0097 24.6 10.2 44 217-265 52-95 (256)
334 1w6u_A 2,4-dienoyl-COA reducta 31.0 2.7E+02 0.0092 25.4 10.2 43 217-264 77-119 (302)
335 1hdc_A 3-alpha, 20 beta-hydrox 30.9 1.7E+02 0.0057 26.3 8.5 64 193-265 32-95 (254)
336 3cxt_A Dehydrogenase with diff 30.7 2.7E+02 0.0094 25.5 10.1 44 217-265 84-127 (291)
337 2c07_A 3-oxoacyl-(acyl-carrier 30.6 2.4E+02 0.0082 25.7 9.7 44 217-265 94-137 (285)
338 3is3_A 17BETA-hydroxysteroid d 30.1 1.8E+02 0.006 26.4 8.6 49 210-266 65-113 (270)
339 3v2g_A 3-oxoacyl-[acyl-carrier 30.0 2.8E+02 0.0096 25.1 10.0 44 217-265 82-125 (271)
340 3l77_A Short-chain alcohol deh 29.8 1.7E+02 0.0057 25.7 8.2 48 211-266 50-97 (235)
341 3oec_A Carveol dehydrogenase ( 29.4 2.2E+02 0.0077 26.5 9.4 46 217-267 108-153 (317)
342 1yb1_A 17-beta-hydroxysteroid 29.3 3.1E+02 0.011 24.6 10.8 44 217-265 81-124 (272)
343 3pgx_A Carveol dehydrogenase; 29.3 2.4E+02 0.0082 25.6 9.4 44 217-265 78-121 (280)
344 3zv4_A CIS-2,3-dihydrobiphenyl 29.2 2.2E+02 0.0074 26.0 9.1 59 193-260 32-90 (281)
345 4egf_A L-xylulose reductase; s 29.2 2.3E+02 0.0077 25.6 9.1 47 211-265 68-114 (266)
346 1t1v_A SH3BGRL3, SH3 domain-bi 29.0 1.4E+02 0.0046 22.1 6.3 69 190-271 2-80 (93)
347 3r1i_A Short-chain type dehydr 28.8 1.6E+02 0.0054 27.0 8.0 44 217-265 82-125 (276)
348 1fov_A Glutaredoxin 3, GRX3; a 28.8 1.5E+02 0.0051 20.7 7.2 53 191-253 2-56 (82)
349 3gdg_A Probable NADP-dependent 28.7 3.1E+02 0.011 24.4 11.2 49 210-266 70-118 (267)
350 3tsc_A Putative oxidoreductase 28.6 2E+02 0.0068 26.1 8.7 44 217-265 74-117 (277)
351 3ctg_A Glutaredoxin-2; reduced 28.6 1.5E+02 0.0051 23.7 6.8 72 190-271 37-114 (129)
352 2wci_A Glutaredoxin-4; redox-a 28.6 1.8E+02 0.006 23.7 7.3 68 190-270 35-109 (135)
353 3nyw_A Putative oxidoreductase 28.6 2.9E+02 0.01 24.5 9.7 44 217-265 60-103 (250)
354 3ged_A Short-chain dehydrogena 28.4 2E+02 0.007 26.0 8.5 47 217-268 48-94 (247)
355 3v2h_A D-beta-hydroxybutyrate 28.4 3.4E+02 0.012 24.7 10.6 69 193-266 52-121 (281)
356 3rjz_A N-type ATP pyrophosphat 28.4 3.3E+02 0.011 24.5 11.0 102 158-283 7-120 (237)
357 3bh4_A Alpha-amylase; calcium, 28.2 29 0.00098 35.3 2.8 30 259-288 72-101 (483)
358 3kzv_A Uncharacterized oxidore 28.1 3E+02 0.01 24.5 9.7 60 193-260 30-89 (254)
359 3rkr_A Short chain oxidoreduct 28.0 2E+02 0.0069 25.8 8.5 44 217-265 79-123 (262)
360 1mxg_A Alpha amylase; hyperthe 28.0 30 0.001 34.6 2.9 30 259-288 80-109 (435)
361 1ud2_A Amylase, alpha-amylase; 27.9 30 0.001 35.1 2.9 30 259-288 74-103 (480)
362 1iy8_A Levodione reductase; ox 27.8 2.7E+02 0.0093 24.9 9.4 41 217-262 65-105 (267)
363 3qp9_A Type I polyketide synth 27.8 3.5E+02 0.012 27.5 11.0 52 207-267 309-360 (525)
364 1lwj_A 4-alpha-glucanotransfer 27.7 28 0.00095 34.9 2.6 30 259-288 63-92 (441)
365 3gk3_A Acetoacetyl-COA reducta 27.6 2.6E+02 0.0088 25.2 9.2 45 217-266 76-120 (269)
366 3gaf_A 7-alpha-hydroxysteroid 27.5 3.1E+02 0.01 24.5 9.7 44 217-265 62-105 (256)
367 3ioy_A Short-chain dehydrogena 27.5 1.7E+02 0.0059 27.4 8.2 44 217-265 60-103 (319)
368 1hvx_A Alpha-amylase; hydrolas 27.3 29 0.00099 35.6 2.6 30 259-288 75-104 (515)
369 1wpc_A Glucan 1,4-alpha-maltoh 27.0 31 0.0011 35.0 2.9 30 259-288 76-105 (485)
370 1zem_A Xylitol dehydrogenase; 27.0 3E+02 0.01 24.6 9.6 39 217-260 57-95 (262)
371 2uvd_A 3-oxoacyl-(acyl-carrier 26.9 3.3E+02 0.011 24.0 10.0 44 217-265 55-98 (246)
372 1gcy_A Glucan 1,4-alpha-maltot 26.7 30 0.001 35.6 2.6 28 260-287 87-114 (527)
373 2guy_A Alpha-amylase A; (beta- 26.6 30 0.001 35.0 2.6 32 257-288 89-120 (478)
374 3uve_A Carveol dehydrogenase ( 26.4 2.9E+02 0.0098 25.1 9.4 42 217-263 77-118 (286)
375 1vr6_A Phospho-2-dehydro-3-deo 26.3 2E+02 0.0067 27.8 8.2 82 200-291 201-287 (350)
376 3ghf_A Septum site-determining 26.2 91 0.0031 24.9 4.9 50 230-283 24-78 (120)
377 3awd_A GOX2181, putative polyo 26.0 3.4E+02 0.012 23.9 10.0 44 217-265 63-107 (260)
378 2o23_A HADH2 protein; HSD17B10 26.0 3.1E+02 0.011 24.2 9.5 53 203-263 48-100 (265)
379 3osu_A 3-oxoacyl-[acyl-carrier 25.9 3.4E+02 0.012 23.9 9.7 49 210-266 51-99 (246)
380 1ae1_A Tropinone reductase-I; 25.6 3.7E+02 0.013 24.2 10.6 44 217-265 71-115 (273)
381 3dhu_A Alpha-amylase; structur 25.4 28 0.00096 34.9 2.1 29 260-288 78-106 (449)
382 1ht6_A AMY1, alpha-amylase iso 25.4 32 0.0011 34.0 2.5 29 260-288 63-91 (405)
383 3qmx_A Glutaredoxin A, glutare 25.2 2.2E+02 0.0074 21.4 6.9 69 190-271 16-87 (99)
384 3s55_A Putative short-chain de 25.1 2.8E+02 0.0097 25.0 9.1 45 217-266 72-116 (281)
385 3kts_A Glycerol uptake operon 24.9 29 0.00098 30.6 1.7 48 232-290 18-67 (192)
386 1mxh_A Pteridine reductase 2; 24.9 3.6E+02 0.012 24.2 9.7 45 217-266 63-111 (276)
387 1nff_A Putative oxidoreductase 24.9 2.9E+02 0.01 24.7 9.0 44 217-265 54-97 (260)
388 3vup_A Beta-1,4-mannanase; TIM 24.8 78 0.0027 29.3 5.1 23 264-286 88-110 (351)
389 3ak4_A NADH-dependent quinucli 24.8 2.9E+02 0.01 24.6 9.0 44 217-265 59-102 (263)
390 1x7f_A Outer surface protein; 24.7 82 0.0028 30.9 5.2 58 230-287 37-95 (385)
391 3rag_A Uncharacterized protein 24.6 69 0.0023 29.2 4.3 36 249-286 10-45 (242)
392 3t7c_A Carveol dehydrogenase; 24.5 2.8E+02 0.0097 25.4 9.0 43 217-264 90-132 (299)
393 3a28_C L-2.3-butanediol dehydr 24.5 3E+02 0.01 24.5 9.0 44 217-265 54-97 (258)
394 1j0a_A 1-aminocyclopropane-1-c 24.4 1.7E+02 0.006 27.5 7.5 31 191-224 97-128 (325)
395 3tzq_B Short-chain type dehydr 24.3 2.7E+02 0.0091 25.2 8.7 59 193-260 38-96 (271)
396 3u9l_A 3-oxoacyl-[acyl-carrier 24.3 3.8E+02 0.013 25.0 10.0 49 210-266 56-104 (324)
397 3qiv_A Short-chain dehydrogena 24.3 2.8E+02 0.0095 24.5 8.7 38 217-259 59-96 (253)
398 4aie_A Glucan 1,6-alpha-glucos 24.1 38 0.0013 34.7 2.9 30 259-288 73-102 (549)
399 3ksu_A 3-oxoacyl-acyl carrier 24.0 2.3E+02 0.0079 25.5 8.1 44 217-265 64-107 (262)
400 3qlj_A Short chain dehydrogena 23.9 2.9E+02 0.0098 25.8 9.0 44 217-265 87-130 (322)
401 1spx_A Short-chain reductase f 23.8 3.2E+02 0.011 24.6 9.1 42 217-263 59-100 (278)
402 1vs1_A 3-deoxy-7-phosphoheptul 23.6 4.2E+02 0.015 24.4 9.7 84 199-291 132-219 (276)
403 4iin_A 3-ketoacyl-acyl carrier 23.6 3.5E+02 0.012 24.3 9.3 49 209-265 75-123 (271)
404 4iiu_A 3-oxoacyl-[acyl-carrier 23.6 3.6E+02 0.012 24.1 9.4 44 217-265 77-120 (267)
405 3o0k_A Aldo/keto reductase; ss 23.5 4.3E+02 0.015 24.2 10.0 64 217-293 155-218 (283)
406 3ucx_A Short chain dehydrogena 23.3 4E+02 0.014 23.8 9.8 38 217-259 61-98 (264)
407 2p0o_A Hypothetical protein DU 23.3 99 0.0034 30.1 5.4 56 232-287 15-71 (372)
408 3sc4_A Short chain dehydrogena 23.3 2.8E+02 0.0097 25.2 8.7 53 206-266 58-110 (285)
409 2b4q_A Rhamnolipids biosynthes 22.9 4.2E+02 0.014 23.9 10.5 44 217-265 78-121 (276)
410 3ie7_A LIN2199 protein; phosph 22.9 4.5E+02 0.015 24.2 10.7 120 159-288 34-172 (320)
411 1j0h_A Neopullulanase; beta-al 22.8 37 0.0013 35.5 2.5 29 260-288 217-245 (588)
412 2wsb_A Galactitol dehydrogenas 22.8 3.7E+02 0.013 23.6 9.2 54 203-265 47-101 (254)
413 4imr_A 3-oxoacyl-(acyl-carrier 22.7 3.1E+02 0.011 24.8 8.8 43 217-265 83-125 (275)
414 2h7i_A Enoyl-[acyl-carrier-pro 22.6 3.3E+02 0.011 24.4 9.0 61 193-261 36-99 (269)
415 3ijr_A Oxidoreductase, short c 22.5 4.2E+02 0.015 24.1 9.8 39 217-260 98-136 (291)
416 3kvo_A Hydroxysteroid dehydrog 22.5 3.5E+02 0.012 25.7 9.3 53 206-266 94-146 (346)
417 1jae_A Alpha-amylase; glycosid 22.2 32 0.0011 34.9 1.7 30 259-288 68-97 (471)
418 2ae2_A Protein (tropinone redu 22.2 4.1E+02 0.014 23.5 9.8 44 217-265 59-103 (260)
419 2z1k_A (NEO)pullulanase; hydro 22.2 34 0.0012 34.5 2.0 16 233-248 96-111 (475)
420 2aaa_A Alpha-amylase; glycosid 22.2 34 0.0012 34.7 2.0 32 257-288 89-120 (484)
421 3svt_A Short-chain type dehydr 21.9 3.2E+02 0.011 24.7 8.8 44 217-265 64-108 (281)
422 1wza_A Alpha-amylase A; hydrol 21.9 36 0.0012 34.5 2.1 30 259-288 75-104 (488)
423 2pnf_A 3-oxoacyl-[acyl-carrier 21.5 4E+02 0.014 23.1 10.6 44 217-265 58-101 (248)
424 3pxx_A Carveol dehydrogenase; 21.3 4.5E+02 0.015 23.6 10.5 42 217-263 72-113 (287)
425 3i4f_A 3-oxoacyl-[acyl-carrier 21.2 2.8E+02 0.0095 24.7 8.1 37 217-258 58-94 (264)
426 2dh2_A 4F2 cell-surface antige 21.2 39 0.0013 33.7 2.1 31 258-288 74-104 (424)
427 3l4n_A Monothiol glutaredoxin- 20.9 2.9E+02 0.01 22.0 7.2 72 190-271 14-90 (127)
428 3p9x_A Phosphoribosylglycinami 20.8 4E+02 0.014 23.5 8.6 54 160-223 7-60 (211)
429 2hq1_A Glucose/ribitol dehydro 20.8 4.2E+02 0.014 23.0 10.0 42 217-263 56-97 (247)
430 2q2v_A Beta-D-hydroxybutyrate 20.7 4.4E+02 0.015 23.2 10.2 44 217-265 52-95 (255)
431 1ua7_A Alpha-amylase; beta-alp 20.6 30 0.001 34.4 1.1 14 307-320 166-179 (422)
432 2kyg_A CAMP-dependent protein 20.6 5.8 0.0002 26.7 -2.9 44 1-44 3-46 (50)
433 1vp8_A Hypothetical protein AF 20.5 4.3E+02 0.015 23.1 9.1 103 159-276 18-133 (201)
434 1gve_A Aflatoxin B1 aldehyde r 20.3 3.6E+02 0.012 25.2 8.9 70 217-293 132-201 (327)
435 1bqc_A Protein (beta-mannanase 20.1 1.2E+02 0.0041 28.1 5.3 41 204-247 37-78 (302)
436 3asu_A Short-chain dehydrogena 20.0 3.1E+02 0.011 24.3 8.1 50 203-260 36-85 (248)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-75 Score=613.49 Aligned_cols=462 Identities=40% Similarity=0.771 Sum_probs=420.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCc
Q 048643 16 VINPLDPEEFRRQAHMVIDFIADYYKNVDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNY 95 (506)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~ 95 (506)
++.+||+++||+++++++|.+++|++++.++||.|.+.|++++..++..+|++|.+++++++++.+.+.++.++|+||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 81 (481)
T 4e1o_A 2 PLGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHM 81 (481)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTB
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc---CCCCcEEEcCCchHHHHHH
Q 048643 96 FAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLF---SGNGGGVIQGTTCEAILCT 172 (506)
Q Consensus 96 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~---~~~~~g~~t~ggt~a~l~a 172 (506)
++|+++++.+++++++++++++|++...|..+|..+++|+++++|+++++|++..+.. .+.++|++|+|||+||++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~a 161 (481)
T 4e1o_A 82 HAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIA 161 (481)
T ss_dssp CSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHH
T ss_pred eEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999976411 1235799999999999999
Q ss_pred HHHHHHHHHHhhcccC--------CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 173 LTAARDRVLNKIGREN--------ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 173 l~~ar~~~~~~~~~~~--------~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
+.++|++.+++.+..+ .++.+||+|..+|+|+.+++++.|. +++.||+++ +|+||+++|+++|++++
T Consensus 162 l~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~--~~~~d~~~Le~~i~~~~ 236 (481)
T 4e1o_A 162 LLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPVDD--NFSLRGEALQKAIEEDK 236 (481)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCC--CCcCCHHHHHHHHHHHH
Confidence 9999998765431111 1678999999999999999999998 999999974 57999999999999998
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
++|..|++|++++|+|++|.+|||++|+++|++||+|+|||+|||++++++++++..+.|++.+||+++|+||||++|++
T Consensus 237 ~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g 316 (481)
T 4e1o_A 237 QRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD 316 (481)
T ss_dssp HTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS
T ss_pred hCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc
Confidence 88999999999999999999999999999999999999999999999888998998888999999999999999999999
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 048643 325 CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 325 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~ 404 (506)
||+++++++..+.+.+...+.|+..... ...+++.+++++++|+++++++|++++.+|.+|++++++++.++++++.+
T Consensus 317 ~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~ 394 (481)
T 4e1o_A 317 CTGFWVKDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFES 394 (481)
T ss_dssp CEEEEESBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHhcCCchhccCccc--CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998877788888899876432 23457788999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCC
Q 048643 405 LVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATL 478 (506)
Q Consensus 405 ~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 478 (506)
.|++.|+|+ | ++|+|++.+. +..+.++.++|.++|+++++++.+.|..++|+++++++
T Consensus 395 ~L~~~~g~~~~~~~~~~~v~f~~~~~----------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~ 458 (481)
T 4e1o_A 395 LVRNDPSFEIPAKRHLGLVVFRLKGP----------------NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQF 458 (481)
T ss_dssp HHHTCTTEECCSCCCSSEEEEEESSC----------------HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTT
T ss_pred HHhcCCCeEEecCCceeEEEEEeCCc----------------hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCC
Confidence 999999998 3 8999999764 45678899999999988889999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHc
Q 048643 479 TEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 479 tt~edi~~li~~l~~~~~~l~~ 500 (506)
|+++||+++++.|+++++++.+
T Consensus 459 tt~~di~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 459 TTRDDILRDWNLIRDAATLILS 480 (481)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988764
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1.1e-74 Score=609.77 Aligned_cols=458 Identities=41% Similarity=0.787 Sum_probs=399.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 048643 20 LDPEEFRRQAHMVIDFIADYYKNVDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYF 99 (506)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 99 (506)
||+++||+.+++++|.+++|++++.++||.|.+.|++|+..++..+|++|.+++++++++.+.+.++.++|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF 80 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCCcEEEcCCchHHHHHHHHHHH
Q 048643 100 PSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLF--SGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 100 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
+++..+++++++++++.+|++...|..+|..+++|+++++|+++++|+|..+.. .+.++|++|+|||+||++|+.++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar 160 (475)
T 3k40_A 81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK 160 (475)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999975421 123479999999999999999999
Q ss_pred HHHHHhhcccC--------CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 048643 178 DRVLNKIGREN--------ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 178 ~~~~~~~~~~~--------~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 249 (506)
++..++.+..+ .++++|++|..+|+|+.++++++|+ +++.||+++ ++ ||+++|+++|++++++|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~ 234 (475)
T 3k40_A 161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV---KLRSVQSEN--HR-MRGAALEKAIEQDVAEGLI 234 (475)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC---EEEEECCBT--TB-CCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC---ceEEEECCC--CC-cCHHHHHHHHHHHHHCCCc
Confidence 88765421111 1467899999999999999999999 999999974 58 9999999999999888989
Q ss_pred cEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEE
Q 048643 250 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLW 329 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~ 329 (506)
|++|++++|+|++|.+||+++|+++|++||+|+|||+|||++.+++++++..+.|++.+||+++|+|||+++|++||+++
T Consensus 235 ~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~ 314 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW 314 (475)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred cEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence 99999999999999999999999999999999999999999988888888888888999999999999999999999999
Q ss_pred EeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 330 VKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
++++..+.+.+...+.|+..... ...+++.+++++++|+++++++|++++.+|.+|+++++++..++++++.+.|+++
T Consensus 315 ~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 392 (475)
T 3k40_A 315 LKDPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD 392 (475)
T ss_dssp ESSGGGC-----------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EeCHHHHHHHhcCCccccCCCcC--CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99998776777778889865422 2345678899999999999999999999999999999999999999999999999
Q ss_pred CCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHH
Q 048643 410 KRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 410 ~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~ed 483 (506)
|+|+ | ++|+|++.+. +..+.++.++|.++|.++++++.+.|..++|+++++++|+++|
T Consensus 393 ~g~~l~~~~~~~iv~f~~~~~----------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~d 456 (475)
T 3k40_A 393 SRFELAAEINMGLVCFRLKGS----------------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSED 456 (475)
T ss_dssp TTEEESSCCBTTEEEEEESSC----------------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHH
T ss_pred CCEEEecCCceEEEEEEeCCc----------------hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHH
Confidence 9998 3 9999999764 4567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcc
Q 048643 484 VMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 484 i~~li~~l~~~~~~l~~~ 501 (506)
|+++++.|+++++++.++
T Consensus 457 i~~~~~~i~~~~~~~~~~ 474 (475)
T 3k40_A 457 MEYSWKEVSAAADEMEQE 474 (475)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999988764
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=2.8e-68 Score=565.56 Aligned_cols=472 Identities=21% Similarity=0.336 Sum_probs=412.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHhhh---CCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC
Q 048643 19 PLDPEEFRRQAHMVIDFIADYYKNVDKY--PVRSQVEPGYLRKR---LPECAPYNPESMETILQDVQEHIVPGVTHWQSP 93 (506)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~p~~l~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p 93 (506)
..+.+++++++++++|.+++|++++.++ +|.+...|++|+.. ++.++|++|.++++|++++.+.+.++ .+++||
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~p 96 (511)
T 3vp6_A 18 KNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG-VRTGHP 96 (511)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-CCTTST
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-CCCCCC
Confidence 3688999999999999999999998765 47788999999999 89999999999999999999887766 557999
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTL 173 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al 173 (506)
+||||+++++.+++++++++++++|++...|..+|..+++|+++++|+++++|++.+. +++++|+|||+||+.|+
T Consensus 97 ~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~-----~~~~~t~ggt~a~~~al 171 (511)
T 3vp6_A 97 RFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISNMYSI 171 (511)
T ss_dssp TEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHHHHHH
T ss_pred CceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC-----CceEECCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998531 37999999999999999
Q ss_pred HHHHHHHHH---hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 174 TAARDRVLN---KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 174 ~~ar~~~~~---~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
.++|+++++ +.|..+.++.+|++|..+|+|+.++++++|+|..+++.||++. +|+||+++|+++|+++.++|..|
T Consensus 172 ~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~ 249 (511)
T 3vp6_A 172 MAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVP 249 (511)
T ss_dssp HHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCc
Confidence 999986532 2233334688999999999999999999999888899999985 57999999999999998889999
Q ss_pred EEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEE
Q 048643 251 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 330 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~ 330 (506)
++|++++|+|++|.+|||++|+++|++||+|+|||+||+++++++++++..+.|++++||+++|+||||++|++||++++
T Consensus 250 ~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~ 329 (511)
T 3vp6_A 250 FYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILV 329 (511)
T ss_dssp EEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEE
T ss_pred EEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 331 KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
+++..+...+...+.|+..........+++.+++++++|+++++++|++|+.+|.+|++++++++.++++++++.|++.|
T Consensus 330 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~p 409 (511)
T 3vp6_A 330 KEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNRE 409 (511)
T ss_dssp SSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred eCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99987777788889999765443344567788999999999999999999999999999999999999999999999999
Q ss_pred CCc------c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECC-EEEEEEEecCCCCCH
Q 048643 411 RVS------P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGG-IYAMRFAVGATLTEE 481 (506)
Q Consensus 411 ~~~------p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~ 481 (506)
+|+ | ++|+|++.|...+... .........+..+.++.++|.++|+++++.+...+ ..++|++++++.+++
T Consensus 410 g~~l~~~~~p~~~~v~f~~~p~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~ 488 (511)
T 3vp6_A 410 EFEMVFNGEPEHTNVCFWYIPQSLRGVP-DSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQ 488 (511)
T ss_dssp TEEESSSSCCSSSCEEEEECCGGGSSCC-CCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCH
T ss_pred CEEEEecCCCCeEEEEEEEeCccccccc-cchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCH
Confidence 987 3 8899999775321100 00011223455677899999999998887666555 468999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 048643 482 RHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 482 edi~~li~~l~~~~~~l~ 499 (506)
+||++++++|+++++.+.
T Consensus 489 ~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 489 SDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999999987763
No 4
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=6.2e-69 Score=568.30 Aligned_cols=461 Identities=42% Similarity=0.816 Sum_probs=402.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 048643 20 LDPEEFRRQAHMVIDFIADYYKNVDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYF 99 (506)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 99 (506)
||.++||+++++++|.+++|++++.++||.|...|++++..++..+|++|.+++++++++.+.+.++..+|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCCcEEEcCCchHHHHHHHHHHH
Q 048643 100 PSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLF--SGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 100 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
++++.+++.+++++++++|++...|..+|..+++|+++++|+++++|++.++.. .+.++|++|+|||+||+.|+.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~ 160 (486)
T 1js3_A 81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR 160 (486)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999864210 012368999999999999999998
Q ss_pred HHHHHhhccc-C-------CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 048643 178 DRVLNKIGRE-N-------ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 178 ~~~~~~~~~~-~-------~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 249 (506)
++..++.+.. | .++.+|++|..+|+|+.++++.+|+ +++.||++. +|+||+++|+++|++++++|..
T Consensus 161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~ 235 (486)
T 1js3_A 161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDG--KFAMRASALQEALERDKAAGLI 235 (486)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCC--CCCCCHHHHHHHHHHHHhCCCC
Confidence 7654421111 1 0256799999999999999999999 899999974 6899999999999999999999
Q ss_pred cEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEE
Q 048643 250 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLW 329 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~ 329 (506)
|++|++++|+|++|.+||+++|+++|++||+|+|||+|||++.+.++++++.+.+++++||+++|+|||+++|++||+++
T Consensus 236 p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~ 315 (486)
T 1js3_A 236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315 (486)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence 99999999999999999999999999999999999999999988888888888888899999999999999999999999
Q ss_pred EeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 330 VKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
++++..+.+.+...+.|+...........++.+++++++|+++++++|++++.+|.+|+++++++..++++++.+.|++.
T Consensus 316 ~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 395 (486)
T 1js3_A 316 VKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD 395 (486)
T ss_dssp ESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99987666677667788865322112345666788999999999999999999999999999999999999999999999
Q ss_pred CCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHH
Q 048643 410 KRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 410 ~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~ed 483 (506)
|+|+ | ++++|++.+. +..+.++.++|.++|+++++++.+.+..++|+++++++++++|
T Consensus 396 ~~~~~~~~~~~~~v~f~~~~~----------------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~d 459 (486)
T 1js3_A 396 PRFEVCAEVTLGLVCFRLKGS----------------DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGH 459 (486)
T ss_dssp TTEEECSCCCSSEEEEEESSC----------------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHH
T ss_pred CCeEEeCCCceeEEEEEecCh----------------HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHH
Confidence 9988 4 8999998654 3456788889988998888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcc
Q 048643 484 VMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 484 i~~li~~l~~~~~~l~~~ 501 (506)
|+++++.|+++++++.++
T Consensus 460 i~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 460 VRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999887654
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=4e-65 Score=541.53 Aligned_cols=472 Identities=21% Similarity=0.336 Sum_probs=400.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHhhh---CCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC
Q 048643 18 NPLDPEEFRRQAHMVIDFIADYYKNVDKY--PVRSQVEPGYLRKR---LPECAPYNPESMETILQDVQEHIVPGVTHWQS 92 (506)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~p~~l~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~ 92 (506)
..|++++||+++++++|.+++|++++.++ ||.|.+.|++++.. ++.++|++|.+++++++++.+.+.++.. +.|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 92 (504)
T 2okj_A 14 AKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVR-TGH 92 (504)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCC-TTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccCC-CCC
Confidence 34999999999999999999999998764 49999999999999 9999999999999999999887766554 459
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCT 172 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~a 172 (506)
|+|++|++++..+++++++++++++|++...|..+|..+++|+++++|+++++|++.+. +++++|+|||+||+++
T Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~-----~~~~~t~ggtea~~~a 167 (504)
T 2okj_A 93 PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISNMYS 167 (504)
T ss_dssp TTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHHHHH
T ss_pred CCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCC-----CCEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998421 2799999999999999
Q ss_pred HHHHHHHHHHh---hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 048643 173 LTAARDRVLNK---IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 173 l~~ar~~~~~~---~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 249 (506)
+.++|++..+. .|....++.+|++|..+|+|+.++++.+|+|.++++.||+++ +|+||+++|+++|+++.++|..
T Consensus 168 l~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~ 245 (504)
T 2okj_A 168 IMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYV 245 (504)
T ss_dssp HHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCC
Confidence 99998754321 121112356899999999999999999999776899999974 5799999999999998888888
Q ss_pred cEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEE
Q 048643 250 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLW 329 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~ 329 (506)
|.+|++++|+|++|.+||+++|+++|++||+|+|||+||+++.+.+++++..+.+++++||+++++|||+++|++||+++
T Consensus 246 ~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~ 325 (504)
T 2okj_A 246 PFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAIL 325 (504)
T ss_dssp EEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred ceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEE
Confidence 99999999999999999999999999999999999999999998888888888888899999999999999999999999
Q ss_pred EeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 330 VKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
+|++..+...+...++|+..........+++.+++++++||++++++|++++.+|.+|+++++++..+++++|.+.|++.
T Consensus 326 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 405 (504)
T 2okj_A 326 VKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR 405 (504)
T ss_dssp ESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99986666566677889865332222335677889999999999999999999999999999999999999999999998
Q ss_pred CCCc------c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCE-EEEEEEecCCCCC
Q 048643 410 KRVS------P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGI-YAMRFAVGATLTE 480 (506)
Q Consensus 410 ~~~~------p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lR~~~~~~~tt 480 (506)
|+|+ | ++|+|++.+....... ....-.+..+..+.++.++|.++|+++++++.+.+. .++|++++|+.++
T Consensus 406 ~~~~~~~~~~p~~~~v~f~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t 484 (504)
T 2okj_A 406 EEFEMVFNGEPEHTNVCFWYIPQSLRGVP-DSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAAT 484 (504)
T ss_dssp TTEEESSSSCCSSSCEEEEECCGGGSSCC-CCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCC
T ss_pred CCEEEEecCCCCeEEEEEEEeCccccccc-cchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCC
Confidence 8887 3 7899998653100000 000001122334678899999999888887777765 7999999989999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 048643 481 ERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 481 ~edi~~li~~l~~~~~~l 498 (506)
++||+++++.|+++++++
T Consensus 485 ~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 485 QSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988665
No 6
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=5.4e-64 Score=534.00 Aligned_cols=474 Identities=22% Similarity=0.317 Sum_probs=395.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 048643 13 SGLVINPLDPEEFRRQAHMVIDFIAD-YYKNVDK--YPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTH 89 (506)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~ 89 (506)
...+..+|+.++||+++++++|.+++ |++++.+ +||.|...|++++..++..+|++|.+++++++++.+.+.++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~- 105 (515)
T 2jis_A 27 EALPSLAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSVK- 105 (515)
T ss_dssp --CCCCSCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSCC-
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCCC-
Confidence 34445569999999999999999999 9998775 4999999999999999999999999999999999887666654
Q ss_pred CCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHH
Q 048643 90 WQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 169 (506)
Q Consensus 90 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~ 169 (506)
+.||+|++|+++++.+.+++++++++++|++...|..+|..+++|.++++|+++++|++.. ++++|+|||+||
T Consensus 106 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~-------~~~~t~ggtea~ 178 (515)
T 2jis_A 106 TGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG-------DGIFCPGGSISN 178 (515)
T ss_dssp TTSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC-------EEEEESSHHHHH
T ss_pred CCCCCeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC-------CeEEcCCcHHHH
Confidence 4599999999999999999999999999999989999999999999999999999999854 799999999999
Q ss_pred HHHHHHHHHHHH---HhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 048643 170 LCTLTAARDRVL---NKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA 246 (506)
Q Consensus 170 l~al~~ar~~~~---~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 246 (506)
++++.++|+++. ++.|..+.++.+|+++..+|+|+.++++.+|+|..+++.||+++ +++||+++|+++|+++.++
T Consensus 179 ~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~ 256 (515)
T 2jis_A 179 MYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAE 256 (515)
T ss_dssp HHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhC
Confidence 999999987542 11122222466899999999999999999999877899999975 5799999999999988888
Q ss_pred CCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcce
Q 048643 247 GLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCC 326 (506)
Q Consensus 247 g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g 326 (506)
|..|.+|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.++++++.+.+++++||+++|+|||+++|++||
T Consensus 257 g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G 336 (515)
T 2jis_A 257 GAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCS 336 (515)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCE
T ss_pred CCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCee
Confidence 88899999999999999999999999999999999999999999999888888888888899999999999999999999
Q ss_pred EEEEeCc-hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHH
Q 048643 327 CLWVKDP-SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERL 405 (506)
Q Consensus 327 ~~~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 405 (506)
++++|++ ..+.+.+...++|+..........++++.++++++||++++++|++++.+|.+|+++++++..+++++|.+.
T Consensus 337 ~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~ 416 (515)
T 2jis_A 337 ALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEE 416 (515)
T ss_dssp EEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 555556666788886432222233466778889999999999999999999999999999999999999999
Q ss_pred HHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECC-EEEEEEEecCCC
Q 048643 406 VASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGG-IYAMRFAVGATL 478 (506)
Q Consensus 406 l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~~~~~~~ 478 (506)
|++.|+|+ | +.|+|++.+...+...+ ...-....++.+.++.+.+.++|.++++.+.+.+ ..++|++++++.
T Consensus 417 L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~-~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~ 495 (515)
T 2jis_A 417 MKKREGFELVMEPEFVNVCFWFVPPSLRGKQE-SPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSA 495 (515)
T ss_dssp HHTSTTEEESSCCSSSEEEEEECCGGGTTCTT-STTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTT
T ss_pred HhcCCCEEEeCCCCeeEEEEEEeCcccccccc-chhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCC
Confidence 99999988 3 78999986531100000 0001123344566788889999998877776655 479999998899
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 048643 479 TEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 479 tt~edi~~li~~l~~~~~~ 497 (506)
+|++||+++++.|++++++
T Consensus 496 ~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 496 LTCADMDFLLNELERLGQD 514 (515)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999988754
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=5.2e-62 Score=516.66 Aligned_cols=453 Identities=22% Similarity=0.367 Sum_probs=385.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhhCCC-CCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccc
Q 048643 19 PLDPEEFRRQAHMVIDFIADYYKNVDKYPVRSQVEPGYLRKRLPE-CAPYNPESMETILQDVQEHIVPGVTHWQSPNYFA 97 (506)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~l~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~ 97 (506)
+++.++||+++++++|.+++|+++.. +| .+...|++++..++. .+|++|.+++++++++.+.+.++..+|+||+||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~ 105 (497)
T 2qma_A 28 ELGSAEFASVMSHTTSAMKSVFEQVN-AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIA 105 (497)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHCC-SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcc-CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeE
Confidence 78899999999999999999999984 44 777889999999987 5899999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
|++++..+++++++++...+|++...|..+|..+++|+++++|+++++|++... .+++|+|||+||+.++.++|
T Consensus 106 ~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~------~~~~t~ggt~a~~~al~~ar 179 (497)
T 2qma_A 106 HLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKA------DGIFTSGGTQSNQMGLMLAR 179 (497)
T ss_dssp SSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC------EEEEESSHHHHHHHHHHHHH
T ss_pred eCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCC------CeEEcCCchHHHHHHHHHHH
Confidence 999999999999999999999988899999999999999999999999997532 79999999999999999998
Q ss_pred HHHHHhh-c----ccCC----CCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 048643 178 DRVLNKI-G----RENI----SKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGL 248 (506)
Q Consensus 178 ~~~~~~~-~----~~~~----~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 248 (506)
+++..+. + ..|. ++.+|+++..+|+|+.++++.+|+|.++++.||+++ +++||+++|+++|+++.++|.
T Consensus 180 ~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~ 257 (497)
T 2qma_A 180 DWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGL 257 (497)
T ss_dssp HHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTC
T ss_pred HHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCC
Confidence 7655311 0 0111 245899999999999999999999766899999974 579999999999998877777
Q ss_pred ccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEE
Q 048643 249 VPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCL 328 (506)
Q Consensus 249 ~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~ 328 (506)
+|++|+++.|+|++|.+||+++|+++|++||+|+|||+||+++...++ +++.+.+++++|++++|+|||+++|++||++
T Consensus 258 ~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l 336 (497)
T 2qma_A 258 IPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISCGAL 336 (497)
T ss_dssp EEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEE
T ss_pred cceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcceEEE
Confidence 788999999999999999999999999999999999999999988777 7777788889999999999999999999999
Q ss_pred EEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 329 WVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 329 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
+++++..+ +.+...+.|+..... ..+++..++++++|+++++++|++++.+|.+++++++++..+++++|.+.|++
T Consensus 337 ~~~~~~~~-~~~~~~~~yl~~~~~---~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 412 (497)
T 2qma_A 337 LVNDKSNF-KFLLHHADYLNREHD---ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRT 412 (497)
T ss_dssp EESCGGGG-GGGCC-----------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCHHHH-HHhcCCchhcCCccc---cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99988755 355556678754321 13456677889999999999999999999999999999999999999999999
Q ss_pred CCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHH
Q 048643 409 DKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEER 482 (506)
Q Consensus 409 ~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~e 482 (506)
.++|+ | ++|+|++.+... ..+.++.++.+.+.++|.++++++.+.+..++|++++++.++++
T Consensus 413 ~~~~~~~~~~~~~~v~f~~~~~~~------------~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~e 480 (497)
T 2qma_A 413 NDQFELLAEPSLSTVLFRATHETA------------DLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTS 480 (497)
T ss_dssp CTTEEECSCCSSSEEEEEECCSSS------------CHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHH
T ss_pred CCCeEEEcCCCceEEEEEEcCCcc------------CHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHH
Confidence 98887 4 899999876410 12456778888999999988888888888999999988999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 048643 483 HVMVAWTMVQEQLEAF 498 (506)
Q Consensus 483 di~~li~~l~~~~~~l 498 (506)
||+++++.|+++++++
T Consensus 481 di~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 481 DFESLLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988764
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=4.1e-48 Score=405.26 Aligned_cols=406 Identities=16% Similarity=0.185 Sum_probs=317.3
Q ss_pred hhHHhhhCCCCCCCCCCCHHHHHHHHHHHh-cCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHH
Q 048643 54 PGYLRKRLPECAPYNPESMETILQDVQEHI-VPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATE 132 (506)
Q Consensus 54 p~~l~~~~~~~~p~~~~~~~~il~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~ 132 (506)
...++..++..+|++|.++++|++++.+.+ .++..+++||+|++.. . +..+.+++..+++.+...|..+|...+
T Consensus 7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~~----~-~~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTW----D-DENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCCC----C-CHHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCCC----c-hHHHHHHHHHHhccCCCChhhChhHHH
Confidence 455667778899999999999999999988 6888888999998721 1 145789999999988888999999999
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCC--CCeEEEeCCCCchHHHHHHHH
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI--SKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~--~~~~v~~s~~~H~s~~ka~~~ 210 (506)
+|+++++|+++++|++.+.. +...+++|+|||+||+.++.++++.+.++....|. .+..|+++. +|+++.++++.
T Consensus 82 l~~~~~~~la~l~g~~~~~~--~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~ 158 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKN--GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARY 158 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTT--SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccc--cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHH
Confidence 99999999999999986410 00148999999999999999988754332111221 135788888 99999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh------CCEEEe
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF------GIWVHV 284 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~------g~~lhV 284 (506)
+|+ +++.||+++ ++|+||+++|+++|+++ +.+|+++.|+|++|.++|+++|+++|++| |+|+||
T Consensus 159 ~G~---~v~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 159 WDV---ELREIPMRP-GQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp TTC---EEEECCCBT-TBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred cCc---eEEEEecCC-CCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence 999 999999975 35899999999999653 56899999999999999999999999996 999999
Q ss_pred ecccccccc--cCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 285 DAAYAGSAC--ICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 285 DaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
|+||+++.. +.+..+..+ .++++|++++++|||+++|++||+++++++..+.+.+...+.|+... +..
T Consensus 229 D~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 298 (452)
T 2dgk_A 229 DAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ---------IGT 298 (452)
T ss_dssp ECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC---------EEE
T ss_pred EcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC---------CCC
Confidence 999998765 233332222 25689999999999999999999999998765434454556676421 123
Q ss_pred ccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-------ceEEEeecCCCcccccc
Q 048643 363 WQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-------SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 363 ~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~ 431 (506)
++++++|++ .++++|++++.+|.+++++++++..++++++.+.|+++++|+ | ++|+|++.+...
T Consensus 299 ~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~----- 373 (452)
T 2dgk_A 299 FAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED----- 373 (452)
T ss_dssp CCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCC-----
T ss_pred cccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCccc-----
Confidence 456788887 778999999999999999999999999999999999998776 2 689999865210
Q ss_pred cccchHHHHHHH-HHHHHHHHHhcCcE---EEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccC
Q 048643 432 QLVTEEEAINEF-NRELLESINASGKA---YMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTN 502 (506)
Q Consensus 432 ~~~~~~~~~~~~-~~~l~~~l~~~g~~---~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~ 502 (506)
+.. ..++.++|.++|+. +..++.+.+..++|+++++++ |++||++++++|+++.+++.+.+
T Consensus 374 ---------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~-t~e~id~li~~l~~~~~~~~~~~ 438 (452)
T 2dgk_A 374 ---------PGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGF-EMDFAELLLEDYKASLKYLSDHP 438 (452)
T ss_dssp ---------CSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTC-CHHHHHHHHHHHHHHHHHHHHCG
T ss_pred ---------ccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCC-CHHHHHHHHHHHHHHHHHHHhCC
Confidence 001 15677888888873 344444556789999998765 58899999999999988876543
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=2.5e-45 Score=388.66 Aligned_cols=414 Identities=16% Similarity=0.183 Sum_probs=327.5
Q ss_pred CCCCChhHHhhhCCC-CCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccC
Q 048643 49 RSQVEPGYLRKRLPE-CAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISS 127 (506)
Q Consensus 49 ~~~~~p~~l~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~ 127 (506)
.|...+.+++..+|. .+|+.|.+.+++++.+.+.+... .||+++........++..+.+++..+++.+...|..+
T Consensus 15 ~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l~----gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~ 90 (502)
T 3hbx_A 15 HSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLD----GNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEY 90 (502)
T ss_dssp SCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGGS----CCGGGBTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTC
T ss_pred cccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhccC----CCCCceeccccCCCCCHHHHHHHHHHhccCCCChhcC
Confidence 455668899999987 89999999999999999876432 4777532111222233457888888999988889999
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC--CCCeEEEeCCCCchHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN--ISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~--~~~~~v~~s~~~H~s~~ 205 (506)
|...++|+++++|+++++|++.+. .....|++|+|||+||+.++.+++.++.++....| ..++.|+++..+|+++.
T Consensus 91 p~~~~le~~~~~~la~l~g~~~~~--~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~ 168 (502)
T 3hbx_A 91 PVTTELQNRCVNMIAHLFNAPLEE--AETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE 168 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCS--SCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH
T ss_pred hhHHHHHHHHHHHHHHHhCCCccc--ccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH
Confidence 999999999999999999998211 00126788999999999999998876554332222 13458899999999999
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh------C
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF------G 279 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~------g 279 (506)
++++.+|+ +++.||+++ ++|+||+++|+++|+++ |.+|+++.++|++|.++|+++|+++|+++ |
T Consensus 169 ~~~~~~G~---~~~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~ 238 (502)
T 3hbx_A 169 KFARYFEV---ELKEVKLSE-GYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWD 238 (502)
T ss_dssp HHHHHTTC---EEEEECCBT-TBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCc---eeEEEecCC-CcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCC
Confidence 99999999 999999975 34899999999998764 56899999999999999999999999999 9
Q ss_pred CEEEeecccccccc--cCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 280 IWVHVDAAYAGSAC--ICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 280 ~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
+|+|||+||++++. +.+..+..+. +.++|++++++|||+++|.+||+++++++..+...+...+.|+....
T Consensus 239 ~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~------ 311 (502)
T 3hbx_A 239 TPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ------ 311 (502)
T ss_dssp CCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE------
T ss_pred CeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC------
Confidence 99999999998763 3454444333 56899999999999999999999999988776556666677876431
Q ss_pred cCCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c--ceEEEeecCCCcccc
Q 048643 358 VDYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P--SAVMDKLKPKYENCH 429 (506)
Q Consensus 358 ~~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p--~~v~f~~~~~~~~~~ 429 (506)
..+++.++|+. .++++|++++.+|.+++.++++++.+++++|.+.|+++++|+ | ++|+|++.+..
T Consensus 312 ---~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~---- 384 (502)
T 3hbx_A 312 ---PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS---- 384 (502)
T ss_dssp ---EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS----
T ss_pred ---CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCC----
Confidence 13456677775 678999999999999999999999999999999999998887 2 89999986531
Q ss_pred cccccchHHHHHHHHHHHHHHHHhcCcEEE---eeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 048643 430 SQQLVTEEEAINEFNRELLESINASGKAYM---THAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTNTP 504 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~~~ 504 (506)
.....++.++|.++|+++. .+....+..++|++++ ..++++|++++++.|+++.+++.+.+++
T Consensus 385 -----------~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~-~~~t~edid~li~~L~~~l~~l~~~~~~ 450 (502)
T 3hbx_A 385 -----------CHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR-EDFSRTLAERLVIDIEKVMRELDELPSR 450 (502)
T ss_dssp -----------SCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred -----------cCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHhCccc
Confidence 0012477888888898632 2233456789999995 6678889999999999999988766543
No 10
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=6.7e-40 Score=348.48 Aligned_cols=391 Identities=17% Similarity=0.161 Sum_probs=309.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCC-CCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHH
Q 048643 63 ECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPS-SGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWL 141 (506)
Q Consensus 63 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~l 141 (506)
..+|++|.+.+++++++.+.+.++...|.+++|+|++.. ....+..+.+.+....+.+...+...|...++|.++++|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 567899999999999999988888888999999999865 3566778888888888888888889999999999999999
Q ss_pred HHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEE
Q 048643 142 GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAI 221 (506)
Q Consensus 142 a~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v 221 (506)
++++|++.+. ....|++|+|||+||..++.+++.+..++. |.++..|+++..+|.++.++++.+|+ +++.|
T Consensus 149 a~~~g~~~~~---~~v~~~~t~ggt~a~~~al~a~~~~g~~~~---g~~~d~Vi~~~~~~~~~~~~~~~~G~---~v~~v 219 (514)
T 3mad_A 149 AHMLGGDAAG---GTVCGTVTSGGTESLLLAMKTYRDWARATK---GITAPEAVVPVSAHAAFDKAAQYFGI---KLVRT 219 (514)
T ss_dssp HHHTTGGGGT---SCCEEEEESSHHHHHHHHHHHHHHHHHHHH---CCSSCEEEEETTSCTHHHHHHHHHTC---EEEEE
T ss_pred HHHcCCCCcc---CCcceEEcCcHHHHHHHHHHHHHHHhhhhc---CCCCCeEEEeCccchHHHHHHHHcCC---eeEEe
Confidence 9999998310 001569999999999999999987643322 23457899999999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc-------
Q 048643 222 KTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI------- 294 (506)
Q Consensus 222 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~------- 294 (506)
|+++ +|++|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|||+||+++...
T Consensus 220 ~~~~--~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~ 291 (514)
T 3mad_A 220 PLDA--DYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGY 291 (514)
T ss_dssp CBCT--TSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTC
T ss_pred eeCC--CCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCC
Confidence 9986 5799999999998753 558999999999999999999999999999999999999987652
Q ss_pred -CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCC-
Q 048643 295 -CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR- 372 (506)
Q Consensus 295 -~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~- 372 (506)
.+.+... ..++|++++++|||++.|+++|+++++++......+.....|... .+...++.+++...
T Consensus 292 ~~~~~~~~---~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~gs~~~~~ 359 (514)
T 3mad_A 292 PVPPFDFR---LEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG---------LYFSPTFAGSRPGAL 359 (514)
T ss_dssp CCCCCSTT---STTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC---------SEEESSSCSSCCHHH
T ss_pred CCCccccc---CCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC---------cccCCccCCCCchHH
Confidence 1122222 337899999999999999999999999876543221111122111 01122344555533
Q ss_pred chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-ceEEEeecCCCcccccccccchHHHHHHHHHHH
Q 048643 373 SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNREL 447 (506)
Q Consensus 373 al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (506)
.+++|++++.++.+++++++++..++++++.+.|+++++++ + +++.|+.... ...++
T Consensus 360 ~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~------------------~~~~l 421 (514)
T 3mad_A 360 SATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLWVIAVASDEL------------------NIYQV 421 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSSEEEEECSSS------------------CHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeCCCC------------------CHHHH
Confidence 57899999999999999999999999999999999998887 3 7777765322 13467
Q ss_pred HHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 048643 448 LESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTNT 503 (506)
Q Consensus 448 ~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~~ 503 (506)
.++|.++|+.+ .+. ....++|+++++.++++++|+++++.|+++.+++.+.+.
T Consensus 422 ~~~L~~~Gi~v-~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~~ 474 (514)
T 3mad_A 422 MEEMAGRGWRL-NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHPE 474 (514)
T ss_dssp HHHHHTTTCBC-EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHhcCCEe-ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 78888888753 322 223579999988899988999999999999988876554
No 11
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-40 Score=347.56 Aligned_cols=388 Identities=16% Similarity=0.198 Sum_probs=301.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCccccCCCCC-CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHH
Q 048643 61 LPECAPYNPESMETILQDVQEHIVP-GVTHWQSPNYFAYFPSSG-SIAGFLGEMLSSGFNVVGFNWISSPAATELENIVM 138 (506)
Q Consensus 61 ~~~~~p~~~~~~~~il~~~~~~~~~-~~~~~~~p~~~~~~~~~~-~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~ 138 (506)
....+|++|.+.+++++++.+.... +...|.+|+|+|+++.+. .....+.+.+....+.+...|..+|...++|+++.
T Consensus 34 ~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (497)
T 3mc6_A 34 NFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVV 113 (497)
T ss_dssp CCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHH
Confidence 3457899999999999999987753 567889999999976543 44556666776666667778899999999999999
Q ss_pred HHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCe
Q 048643 139 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNF 218 (506)
Q Consensus 139 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v 218 (506)
+|+++++|++... ..+++++|||+|+..++.+++++..++. |.++..|+++..+|.++.++++.+|+ ++
T Consensus 114 ~~la~~~g~~~~~-----~~~~~~~ggt~a~~~a~~a~~~~~~~~~---g~~~~~Vi~~~~~h~~~~~~~~~~G~---~~ 182 (497)
T 3mc6_A 114 SMVLRMFNAPSDT-----GCGTTTSGGTESLLLACLSAKMYALHHR---GITEPEIIAPVTAHAGFDKAAYYFGM---KL 182 (497)
T ss_dssp HHHHHHTTCCTTT-----CCEEEESSHHHHHHHHHHHHHHHHHHHS---CCSSCEEEEETTSCHHHHHHHHHSCC---EE
T ss_pred HHHHHHhCCCCCC-----CeEEEcCcHHHHHHHHHHHHHHHHHhcC---CCCCceEEEeCCccHHHHHHHHHcCC---eE
Confidence 9999999998221 2789999999999999999987654332 22346899999999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccccc----
Q 048643 219 RAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI---- 294 (506)
Q Consensus 219 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~---- 294 (506)
+.||+++ +++++|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|||+||+++...
T Consensus 183 ~~v~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~ 255 (497)
T 3mc6_A 183 RHVELDP-TTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEK 255 (497)
T ss_dssp EEECBCT-TTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTT
T ss_pred EEEecCc-ccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhh
Confidence 9999975 35799999999998653 568999999999999999999999999999999999999976543
Q ss_pred -----CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCC
Q 048643 295 -----CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 295 -----~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
.+.+... ..++|++++++|||++.|.++|+++++++......+...+.|.... +...++.++|
T Consensus 256 ~~~~~~~~~~~~---~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~ 323 (497)
T 3mc6_A 256 AGYKNLPLLDFR---VPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL---------YGSPTLAGSR 323 (497)
T ss_dssp TTCCSCCCCSTT---STTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC---------BCCSSSCSSC
T ss_pred hcccCCcccccc---CCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC---------cCCcCcccCC
Confidence 1122221 2368999999999999999999999998754322222222332211 1223333443
Q ss_pred CC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc----c--ceEEEeecCCCcccccccccchHHHHH
Q 048643 370 RF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 370 ~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
.. ..+++|++++.++.+++++++++..++++++.+.|++ +|+++ | ++++|+..+.
T Consensus 324 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~----------------- 386 (497)
T 3mc6_A 324 PGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTL----------------- 386 (497)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTT-----------------
T ss_pred cchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCC-----------------
Confidence 32 2457999999999999999999999999999999999 68887 3 7888875432
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 048643 442 EFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~ 501 (506)
...++.+.|.++|+.+ ... .....+|++++ .++++++++++++|+++.+++...
T Consensus 387 -~~~~l~~~L~~~Gi~v-~~~--~~~~~~ri~~~--~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 387 -NIHELSDRLSKKGWHF-NAL--QKPVALHMAFT--RLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp -THHHHHHHHHTTTCBC-EEC--CSSCCEEEECC--TTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred -CHHHHHHHHHhCCEEE-ecC--CCCCeEEEEEe--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1356777888888743 322 22346899986 467789999999999999887654
No 12
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=100.00 E-value=8.8e-39 Score=327.33 Aligned_cols=375 Identities=12% Similarity=0.065 Sum_probs=264.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCC-----------------CCCccccCCCCCCHHHHHHHHHHhhcCCCCcccc
Q 048643 63 ECAPYNPESMETILQDVQEHIVPGVTHWQ-----------------SPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWI 125 (506)
Q Consensus 63 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~-----------------~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 125 (506)
..+|++|.+.++|...|.+.-.....+|. .||||||+++. +..+|++.+ +. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 35899999999999988875443444442 27999999886 555677776 33 788
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch-HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC-EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
.+|+...+|+++..|+.+++|+|..+ ++++++|+| +++.++|.++|.... +...|+++..+|.|+
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~~------~~~lV~GaT~~~~a~~L~aar~~~~--------~~~~viv~r~aHkSv 157 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSVA------SCFVVPMATGMSLTLCFLTLRHKRP--------KAKYIIWPRIDQKSC 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCC------EEEEESSCHHHHHHHHHHHHHHHCT--------TCCEEEEECCCCHHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCc------eEEEECCHHHHHHHHHHHHcchhhc--------CCCEEEEECCcHHHH
Confidence 89999999999999999999999875 679999997 888888888887411 134566678899999
Q ss_pred HHHHHHhCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 205 QKAAQIVGIDLKNFRAIKTTK-SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
.|++.++|+ ..+.|+... ++.+.||+++|+++|+++.. ..+++|+.+.+++.+|++|||++|+++|++||+|+|
T Consensus 158 ~kAl~l~Gl---~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~ 232 (450)
T 3bc8_A 158 FKSMVTAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHV 232 (450)
T ss_dssp HHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHcCC---eeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEE
Confidence 999999999 666654421 12689999999999988642 246788888777778899999999999999999999
Q ss_pred eecccccccccCccchhhhcCC--CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCC
Q 048643 284 VDAAYAGSACICPEFQHFIDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (506)
||+|||+.+.+.+.... .++ ++||+++.|+|||+++|++|+++++|++..+.+.. ..|....
T Consensus 233 VD~A~G~~~~~~~~l~~--~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~---~~~~g~~----------- 296 (450)
T 3bc8_A 233 VNNAYGLQSSKCMHLIQ--QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGRA----------- 296 (450)
T ss_dssp EECTTTTTCHHHHHHHH--HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSCB-----------
T ss_pred EECCCchhhhhhHhHHH--HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH---HHhhcCC-----------
Confidence 99999987654332210 223 68999999999999999999999999887665432 2233110
Q ss_pred CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---CCc----c-c--eEEEeecCCCcccccc
Q 048643 362 DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---RVS----P-S--AVMDKLKPKYENCHSQ 431 (506)
Q Consensus 362 ~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~----p-~--~v~f~~~~~~~~~~~~ 431 (506)
.+ ..++++|.+++.+|.+++++++++++++++++++.|++++ +++ + + ..++.+..-. .
T Consensus 297 -----s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~-----~ 364 (450)
T 3bc8_A 297 -----SA--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTID-----G 364 (450)
T ss_dssp -----CS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTS-----S
T ss_pred -----cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccc-----c
Confidence 00 1249999999999999999999999999999999998877 654 2 1 2223221100 0
Q ss_pred cccchHHHHHHHHHHHHHHHHhc---CcEEEee--------ee---------ECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINAS---GKAYMTH--------AV---------CGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~---g~~~~~~--------~~---------~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
... . + ..+|.-.+... |.-...+ .. .....++=+.+ +...+++|+++++++|
T Consensus 365 ~~~---~--D--~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~-sig~~~~di~~l~~~L 436 (450)
T 3bc8_A 365 HHD---K--A--VTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA-AIGMKMQDVDLFIKRL 436 (450)
T ss_dssp SSS---C--H--HHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEEC-CTTCCHHHHHHHHHHH
T ss_pred ccc---C--C--CceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEe-cCCCCHHHHHHHHHHH
Confidence 000 0 1 12232233222 3222200 00 11234454444 5778999999999999
Q ss_pred HHHHHHHHcc
Q 048643 492 QEQLEAFLTT 501 (506)
Q Consensus 492 ~~~~~~l~~~ 501 (506)
+++.++..+.
T Consensus 437 ~~~~~~~~~~ 446 (450)
T 3bc8_A 437 DKCLNIVRKE 446 (450)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9997776544
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=7.8e-36 Score=312.36 Aligned_cols=392 Identities=13% Similarity=0.101 Sum_probs=274.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcccc
Q 048643 19 PLDPEEFRRQAHMVIDFIADYYKNVDKYPVRSQVEPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAY 98 (506)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~ 98 (506)
.+=+..|.+.+.+++....++++++-. ...+|++|.+.+++.+.+.+....... .|+.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~~~-----~yld~ 86 (456)
T 2z67_A 28 GLIPKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMDTD-----KDPKS 86 (456)
T ss_dssp SSSCHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTBGG-----GCTTC
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhcccc-----ccccc
Confidence 344688999999998888777765421 124677888988888877765433221 22222
Q ss_pred CCCCCCHHHHHHHHH--------------HhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCC
Q 048643 99 FPSSGSIAGFLGEML--------------SSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGT 164 (506)
Q Consensus 99 ~~~~~~~~~~~~~~l--------------~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g 164 (506)
--.++.+..++..+. ...+..+. .|..+|...++++++.+|+++++|++. .+++|+|
T Consensus 87 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~--------~~~~t~g 157 (456)
T 2z67_A 87 VRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV--------HAIATPI 157 (456)
T ss_dssp EECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC--------EEEEESS
T ss_pred cccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC--------CEEEeCc
Confidence 111111111111111 01111222 566777899999999999999999974 2799999
Q ss_pred ch-HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCC-CCCcccCHHHHHHHHHH
Q 048643 165 TC-EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTK-SSSYGLSPDSLLTQINL 242 (506)
Q Consensus 165 gt-~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~ 242 (506)
|| ++|+.++.+++... ++..|+++..+|+|+.++++..|+ +++.||..+ +++|.+|+++|+++|++
T Consensus 158 ~te~a~~~al~~~~~~~---------~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~d~~~l~~~i~~ 225 (456)
T 2z67_A 158 STGMSISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAIKK 225 (456)
T ss_dssp CHHHHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---------CCCEEEEECCCcHHHHHHHHHcCC---CceEEEEeccCCCCCcCHHHHHHHHHH
Confidence 99 67877888776531 334566667799999999999999 899888732 23689999999999943
Q ss_pred HHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccc-cCccchhhhcCCCCCCeeEEcCccccCC
Q 048643 243 DVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC-ICPEFQHFIDGVEGADSFSLNAHKWFFT 321 (506)
Q Consensus 243 ~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~-~~~~~~~~~~gi~~aDsi~~~~hK~l~~ 321 (506)
...++ .+.+|+.+.++|++|.++|+++|+++|+++|+|+|||+||++... ..+.....+.+ ++|++++++|||+++
T Consensus 226 ~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~ 302 (456)
T 2z67_A 226 EIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLT 302 (456)
T ss_dssp HHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCC
T ss_pred HhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCC
Confidence 32222 467888999999999999999999999999999999999987655 23333333333 799999999999999
Q ss_pred CCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHH
Q 048643 322 TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKL 401 (506)
Q Consensus 322 p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~ 401 (506)
|.++|++++|++..+.. + .+.|..... ...++.+|.++..+|.++++++.++..+++++
T Consensus 303 p~g~G~l~~~~~~~~~~-l--~~~~~g~~~------------------~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~ 361 (456)
T 2z67_A 303 PIGGGLVYSTDAEFIKE-I--SLSYPGRAS------------------ATPVVNTLVSLLSMGSKNYLELVKNQKNSKKL 361 (456)
T ss_dssp CSSCEEEEESCHHHHHH-H--HTTSCSCBC------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCHHHHhh-c--CcCCCCCCC------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987755432 2 223332100 01267899999999999999999999999999
Q ss_pred HHHHHHcCC---CCc---c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE--EEe-------ee--e
Q 048643 402 FERLVASDK---RVS---P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA--YMT-------HA--V 463 (506)
Q Consensus 402 l~~~l~~~~---~~~---p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--~~~-------~~--~ 463 (506)
+.+.|++.+ ++. | ++++|++.... . ..++.++|.++|+. -+. +. .
T Consensus 362 l~~~L~~~~~~~g~~v~~~~~~v~~~~~~~~---------------~--~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~ 424 (456)
T 2z67_A 362 LDELLNDLSKKTGGKFLDVESPIASCISVNS---------------D--PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLG 424 (456)
T ss_dssp HHHHHHHHHHHSSCCBCCCCCSSEEEEECSS---------------C--HHHHHHHHHHTTEESCEEECTTCHHHHTCSS
T ss_pred HHHHHHhcccccCCEecCCCCeEEEEEeccc---------------H--HHHHHHHHHHcCCCcceEEeecCcccccccc
Confidence 999999885 655 4 78888873221 0 23455666666641 121 00 0
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 464 CGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 464 ~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.....++|+++ ...++++||++++++|+++
T Consensus 425 ~~~~~~vr~s~-~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 425 TYTHDYIVMNA-AIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp CCSCCEEEEEC-CTTCCHHHHHHHHHHHHTC
T ss_pred ccCcchhhhhh-hcCCCHHHHHHHHHHHHHH
Confidence 11236899998 4677889999999999864
No 14
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.2e-34 Score=292.18 Aligned_cols=375 Identities=16% Similarity=0.168 Sum_probs=285.8
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHH
Q 048643 64 CAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQ 143 (506)
Q Consensus 64 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~ 143 (506)
.+|+.|.+.+++++.+.+.. +...++.+|+|+|+..+++.+ .+.+.+...+..+...+...|...+++.++.+|+++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVLP--ITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCCT--HHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCcH--HHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57899999999999999855 566678899999998765544 235556666655444455567889999999999999
Q ss_pred HcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh--hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEE
Q 048643 144 MLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK--IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAI 221 (506)
Q Consensus 144 l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~--~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v 221 (506)
++|.+.+ .+++|+|||+|+..++.+++..+..+ .+....++..|+++..+|+++.++++.+|+ +++.|
T Consensus 81 ~~~~~~~-------~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v 150 (397)
T 3f9t_A 81 LLNNKDA-------YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYA 150 (397)
T ss_dssp HTTCTTC-------EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC---EEEEE
T ss_pred HhCCCCC-------CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCc---eeEEE
Confidence 9999765 78999999999999999887653221 111122467899999999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccc---
Q 048643 222 KTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF--- 298 (506)
Q Consensus 222 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~--- 298 (506)
|.++ ++.+|+++|++++++. .+.+|+++.++|++|.++|+++|+++|++||+|+|+|++|+++.+.....
T Consensus 151 ~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 151 PIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp CBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred eeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence 9975 5799999999999872 13478888999999999999999999999999999999998765432111
Q ss_pred ------hhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-C
Q 048643 299 ------QHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-F 371 (506)
Q Consensus 299 ------~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~ 371 (506)
...+. . ++|+++.++||+++.|.++|+++++++... +.+....+|+.... .....+++. .
T Consensus 224 ~~~~~~~~~~~-~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~ 290 (397)
T 3f9t_A 224 KKGVNYKFDFS-L-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR----------QATILGTRVGF 290 (397)
T ss_dssp CTTCCCCCSGG-G-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE----------ECSSCSSCCSH
T ss_pred ccccccccccc-c-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC----------ccccccccccc
Confidence 00111 2 689999999999999999999999887644 33433344554321 112223333 2
Q ss_pred CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHHHH
Q 048643 372 RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNR 445 (506)
Q Consensus 372 ~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (506)
..+..|++++.++.+++.+++++..++++++.+.|++. +++ | ++++|+..+ ..
T Consensus 291 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--------------------~~ 349 (397)
T 3f9t_A 291 GGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED--------------------YK 349 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT--------------------HH
T ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC--------------------HH
Confidence 45788999999999999999999999999999999998 776 3 777777532 24
Q ss_pred HHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 446 ELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 446 ~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
++.+.|.++|+. +.+.. ...++|+++. ..+++++|+++++.|+++.+
T Consensus 350 ~~~~~l~~~gi~-v~~~~--~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 350 EVCKKLRDRGIY-VSVCN--CVKALRIVVM-PHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHTTCB-CEECS--SSSEEEEECC-TTCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhCCeE-EeccC--CCCEEEEEEc-CCCCHHHHHHHHHHHHHhhC
Confidence 567777778874 44332 2468999995 66788899999999988753
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=7.7e-30 Score=268.19 Aligned_cols=387 Identities=14% Similarity=0.078 Sum_probs=264.3
Q ss_pred hhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccc-cChhhHH
Q 048643 54 PGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWI-SSPAATE 132 (506)
Q Consensus 54 p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~ 132 (506)
|+.++...+..+| +.+..++++++.+....+...+.+..|+|- ......|.++.++.....+-+..... .+++..+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~-~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLGS-CTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBTT-TCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCcccccc-ccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 5566655566788 689999999999877766655566778873 22233345555554442222222222 4788899
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
++.++.+|+++++|++. ..++++|||+|+..|+.++|....++ |.. .++..|+++..+|.++.++++..|
T Consensus 108 l~~~l~~~la~~~g~~~--------~~~~~~ggt~a~~~al~~~~~~~~~~-Gd~-~~r~~Vlv~~~~h~~~~~~~~~~G 177 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDA--------ITLEPAAGAHGELTGILIIRAYHEDR-GEG-RTRRVVLVPDSAHGSNPATASMAG 177 (474)
T ss_dssp HHHHHHHHHHHHHTCSE--------EECCCSSHHHHHHHHHHHHHHHHHHT-TCT-TTCCEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCc--------eeecChHHHHHHHHHHHHHHHHHHhc-CCc-cCCCEEEEeCCcChhhHHHHHHCC
Confidence 99999999999999974 45788999999999998887643321 110 134478889999999999999999
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHHHhCCEEEeecccccc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
+ +++.||+++ +|.+|+++|+++|++++ .+|+++.+ |++|.+ +|+++|+++|++||+|+|+|++|+.+
T Consensus 178 ~---~vv~v~~~~--~~~~d~~~L~~~i~~~t------~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~ 245 (474)
T 1wyu_B 178 Y---QVREIPSGP--EGEVDLEALKRELGPHV------AALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNA 245 (474)
T ss_dssp C---EEEEECBCT--TSSBCHHHHHHHCSTTE------EEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGG
T ss_pred C---EEEEecCCC--CCCcCHHHHHHhhCCCc------eEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhh
Confidence 9 999999874 57999999999996543 46777776 569999 89999999999999999999999765
Q ss_pred cc-cCccchhhhcCCCCCCeeEEcCccccCCCC-----cceEEEEeCchhHHhhhcCC------ccccCCccccCCCccC
Q 048643 292 AC-ICPEFQHFIDGVEGADSFSLNAHKWFFTTL-----DCCCLWVKDPSALVSSLSTN------PEYLKNKATESKQVVD 359 (506)
Q Consensus 292 ~~-~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~~ 359 (506)
.. ..+ ... .++|++++++||+++.|+ ++|++++++.. .+.+... ..|...... .. .
T Consensus 246 ~~g~~~-~~~-----~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l--~~~l~~~~~~~~g~~~~~~~~~-~~---~ 313 (474)
T 1wyu_B 246 IMGWAR-PGD-----MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL--APYLPVPLVERGEEGFYLDFDR-PK---S 313 (474)
T ss_dssp TTTTCC-HHH-----HTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG--GGGCCSCEEEECSSCEEEECCC-TT---C
T ss_pred hccCCC-ccc-----CCCcEEEEeCccccccCCCCCCCCeEEEEEcHHH--HHhCCCCeeeccCCeeEecccC-cc---c
Confidence 43 111 111 168999999999999996 68999998642 2223210 011100000 00 0
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c------ceEEEeecCCCccccccc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P------SAVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p------~~v~f~~~~~~~~~~~~~ 432 (506)
...+...+.......++|..++.+|.++++++.++..++++++.+.|++. +++ + ..+.+.+ +.+
T Consensus 314 ~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~------- 384 (474)
T 1wyu_B 314 IGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEG------- 384 (474)
T ss_dssp CCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STT-------
T ss_pred CcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCC-------
Confidence 00000001111234567888888899999999999999999999999987 776 2 1133443 210
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
....++.++|.++|+.. ....+. ...++|++++ ..+++++|++++++|+++.++
T Consensus 385 ---------~~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~-~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 385 ---------FRALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPT-ETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp ---------CCHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCC-TTSCHHHHHHHHHHHHHHHTS
T ss_pred ---------CCHHHHHHHHHHCCccc-cccccccccCCEEEEEee-cCCCHHHHHHHHHHHHHHHHh
Confidence 01346677777778752 211111 2468999985 556788999999999987643
No 16
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.97 E-value=2.8e-28 Score=246.02 Aligned_cols=392 Identities=12% Similarity=0.071 Sum_probs=246.0
Q ss_pred HhhhCC-CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCC----CCHHHHHHHH---HHhhcCCCCcccccCh
Q 048643 57 LRKRLP-ECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSS----GSIAGFLGEM---LSSGFNVVGFNWISSP 128 (506)
Q Consensus 57 l~~~~~-~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~---l~~~~n~~~~~~~~~p 128 (506)
++..+. ..+|++|-+.+.|--.+.+.-.-... +|.+.+--+ -....+++.- +.-.....+..-+..|
T Consensus 32 ~~~ll~~r~~P~~g~~d~~ie~~l~~la~mdsn-----n~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QP 106 (501)
T 3hl2_A 32 IRLLLEKGKCPENGWDESTLELFLHELAIMDSN-----NFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQP 106 (501)
T ss_dssp HHHHHHHCCCCSSCCCHHHHHHHHHHHHTTBGG-----GCSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCT
T ss_pred HHHHHHcCCCCccCCCHHHHHHHHHHHHhhccC-----CCcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCC
Confidence 334443 47899999888776666654332222 344433111 1111111111 1111222222222222
Q ss_pred -------hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 129 -------AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 129 -------~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
....-|..+.+||+.+ |+|... ..++++|+|.+++..+.++..+. + . +...|+++..+|
T Consensus 107 KAaGssll~~ltn~l~ld~L~~~-G~~~~~------~~flVnGsTgg~lamilaa~r~~-r----p--g~d~VIvpRn~H 172 (501)
T 3hl2_A 107 KAAGSSLLNKITNSLVLDIIKLA-GVHTVA------NCFVVPMATGMSLTLCFLTLRHK-R----P--KAKYIIWPRIDQ 172 (501)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHT-TCTTCC------EEEEESSCHHHHHHHHHHHHHHH-C----T--TCCEEEEECCCC
T ss_pred CccchHHHHHHHHHHHHHHHHHc-CCCCCC------cEEEECcHHHHHHHHHHHHcCcc-c----C--CCCEEEEecchH
Confidence 3345577788999998 999764 67999999966666655543321 0 0 225677799999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC-CCcccChhHHHHHHHHhC
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTK-SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA-ITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~-tG~idpl~~I~~ia~~~g 279 (506)
.|+.+++.++|+ ..++|+... ++.+.+|++.|+++|++.. ....++|++..+++ .+.+|||++|+++|++||
T Consensus 173 KSv~kAliL~Gl---~Pv~V~p~~d~~~~~id~e~le~aI~e~g---a~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~g 246 (501)
T 3hl2_A 173 KSCFKSMITAGF---EPVVIENVLEGDELRTDLKAVEAKVQELG---PDCILCIHSTTSCFAPRVPDRLEELAVICANYD 246 (501)
T ss_dssp HHHHHHHHHTTC---EEEEECEEEETTEEEECHHHHHHHHHHHC---GGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC---eEEEEeeeecccccCCCHHHHHHHHHhcC---CCcEEEEEecCCCCCCcccccHHHHHHHHHHcC
Confidence 999999999999 888887621 1257999999999999862 12334444443333 457799999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+|+|||+|||+.+.+++......-..++||.++.++||++.+|.+++++++++++.+.+.. ..|...
T Consensus 247 IpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~---~~yPGr---------- 313 (501)
T 3hl2_A 247 IPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS---KMYPGR---------- 313 (501)
T ss_dssp CCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH---HTSCSC----------
T ss_pred CeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHH---HhCCCC----------
Confidence 9999999999987655432211111336999999999999999999999999987665431 123211
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC------Cc-c-ceEEEeecCCCcccccc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR------VS-P-SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~------~~-p-~~v~f~~~~~~~~~~~~ 431 (506)
...+.++++|+++..+|.+||+++++++.+++++|+++|+++.. +. | |-+.+-+.-....
T Consensus 314 --------~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~---- 381 (501)
T 3hl2_A 314 --------ASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLD---- 381 (501)
T ss_dssp --------BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSC----
T ss_pred --------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccc----
Confidence 01346689999999999999999999999999999999987532 11 4 4333333211100
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeee--------EC---------CEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAV--------CG---------GIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~---------g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.........+...|..+-.. |-=.|.++. +. ...++=++. .--++++|||.+++.|+++
T Consensus 382 --~~~~~~~t~~gs~Lf~r~vs-G~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~-aiG~~~~~v~~~~~~l~~~ 457 (501)
T 3hl2_A 382 --EHRDKAVTQLGSMLFTRQVS-GARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAAS-AIGMKMQDVDLFIKRLDRC 457 (501)
T ss_dssp --TTTSCHHHHHHHHHHHTTCC-SCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEEC-CTTCCHHHHHHHHHHHHHH
T ss_pred --ccccccHHHHHHHHHhcCCC-cceeecCCCceEECCeeecCcccCCCCCCchHHHHHH-HcCCCHHHHHHHHHHHHHH
Confidence 00011123334444443221 211222211 11 134566555 4667889999999999999
Q ss_pred HHHHHccC
Q 048643 495 LEAFLTTN 502 (506)
Q Consensus 495 ~~~l~~~~ 502 (506)
..++.+..
T Consensus 458 ~~~~~~~~ 465 (501)
T 3hl2_A 458 LKAVRKER 465 (501)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhh
Confidence 88876543
No 17
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.96 E-value=2.5e-27 Score=243.60 Aligned_cols=352 Identities=13% Similarity=0.052 Sum_probs=245.8
Q ss_pred CCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHH
Q 048643 90 WQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 169 (506)
Q Consensus 90 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~ 169 (506)
..+|.++-+.|++...+..+.+.+...+. .. .+|....+..++.+++++++|.+... ..++++||++|+
T Consensus 9 ~~~~~~~~~~pgp~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~sgt~al 77 (411)
T 3nnk_A 9 LNPPSRLLMGPGPINADPRVLRAMSSQLI---GQ--YDPAMTHYMNEVMALYRGVFRTENRW------TMLVDGTSRAGI 77 (411)
T ss_dssp CCCCCCEEESSSCCCCCHHHHHHHTSCCC---CT--TCHHHHHHHHHHHHHHHHHHTCCCSE------EEEEESCHHHHH
T ss_pred cCCccceeecCCCCCCCHHHHHHhhcccc---cc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEECCCcHHHH
Confidence 35778888888877666666555554321 11 24666778889999999999998652 468888999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 048643 170 LCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAG 247 (506)
Q Consensus 170 l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 247 (506)
..++.++.. ++..|+++..+|++ +.++++..|+ +++.+|++. ++.+|+++|+++|++.
T Consensus 78 ~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~---- 137 (411)
T 3nnk_A 78 EAILVSAIR-----------PGDKVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPW--GEVFTPDQVEDAVKRI---- 137 (411)
T ss_dssp HHHHHHHCC-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH----
T ss_pred HHHHHHhcC-----------CCCEEEEecCCchHHHHHHHHHHcCC---eEEEEecCC--CCCCCHHHHHHHHhhC----
Confidence 888776632 56678888899988 8889999999 999999864 5689999999999863
Q ss_pred CccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceE
Q 048643 248 LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCC 327 (506)
Q Consensus 248 ~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~ 327 (506)
.+.+|+++.++|++|.+.|+++|+++|++||+|+|+|++++.+....+. .. .++|.++.++|||++.|.++|+
T Consensus 138 -~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~~~~g~g~ 210 (411)
T 3nnk_A 138 -RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLET-DV-----WGLDAVSAGMQKCLGGPSGTSP 210 (411)
T ss_dssp -CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCT-TT-----TTCSEEECCSTTTTCCCSSEEE
T ss_pred -CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccch-hc-----cCCcEEEecCccccCCCCceEE
Confidence 1447888999999999999999999999999999999998765443321 11 1689999999999999999999
Q ss_pred EEEeCchhHHhhhcC----CccccCCcccc---CCCccCCCC----------cccc-CCCC-CCchHHHHHHHHhchhHH
Q 048643 328 LWVKDPSALVSSLST----NPEYLKNKATE---SKQVVDYKD----------WQIT-LSRR-FRSLKLWLVIRNYGVANL 388 (506)
Q Consensus 328 ~~~r~~~~l~~~~~~----~~~yl~~~~~~---~~~~~~~~~----------~~~~-~sr~-~~al~~~~~l~~~G~~g~ 388 (506)
+++++.. . +.+.. .+.|....... ......+.+ .... .+.. .....++.+++.+..+|+
T Consensus 211 ~~~~~~~-~-~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~ 288 (411)
T 3nnk_A 211 ITLSARM-E-EAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGL 288 (411)
T ss_dssp EEECHHH-H-HHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred EEECHHH-H-HHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhH
Confidence 9887542 2 22211 11221110000 000000000 0000 1111 122455566777777779
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEE
Q 048643 389 RHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAY 458 (506)
Q Consensus 389 ~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 458 (506)
+++.++..++++++.+.|++. +++ | .+++|++.... ...++.+.|.++ |+..
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~l~~~~gi~v 350 (411)
T 3nnk_A 289 DYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI-----------------NGDQARKLMLEDFGIEI 350 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC-----------------CHHHHHHHHHHHHSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC-----------------CHHHHHHHHHHhcCeEE
Confidence 999999999999999999987 666 2 56777764220 024566666665 7644
Q ss_pred EeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 459 MTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 459 ~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
..+....+..++|++++++.+++++|+++++.|+++.+++.
T Consensus 351 ~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 351 GTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp EECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred eCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 33222223458999986777889999999999999987764
No 18
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=3.4e-27 Score=243.05 Aligned_cols=351 Identities=13% Similarity=0.087 Sum_probs=239.7
Q ss_pred CCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHH
Q 048643 90 WQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 169 (506)
Q Consensus 90 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~ 169 (506)
...|.++.+.|++...+..+.+.+... .. ...++...++..++.+++++++|.+.+. ..++++|||+++
T Consensus 7 ~~~~~~~~~~p~p~~~~~~v~~a~~~~---~~--~~~~~~~~~~~~~l~~~la~~~g~~~~~------~~~~~~s~t~al 75 (416)
T 3isl_A 7 LCTPLRTIMTPGPVEVDPRVLRVMSTP---VV--GQFDPAFTGIMNETMEMLRELFQTKNRW------AYPIDGTSRAGI 75 (416)
T ss_dssp CCCCCCEECSSSSCCCCHHHHHHTTSC---CC--CTTSHHHHHHHHHHHHHHHHHTTCCCSE------EEEEESCHHHHH
T ss_pred cCcccceeecCCCcCcCHHHHHHhccc---CC--CCccHHHHHHHHHHHHHHHHHhCCCCCc------EEEecCcHHHHH
Confidence 446677777777666555555544432 11 1233556788889999999999987652 234888999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 048643 170 LCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAG 247 (506)
Q Consensus 170 l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 247 (506)
..++.+... ++..|+++..+|++ +.++++..|. +++.+|++. ++.+|+++|+++|++..
T Consensus 76 ~~~~~~l~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~--- 136 (416)
T 3isl_A 76 EAVLASVIE-----------PEDDVLIPIYGRFGYLLTEIAERYGA---NVHMLECEW--GTVFDPEDIIREIKKVK--- 136 (416)
T ss_dssp HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC---
T ss_pred HHHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHhcCC---eeEEEecCC--CCCCCHHHHHHHHhhCC---
Confidence 887766522 56678888899998 7788999999 999999985 46999999999998531
Q ss_pred CccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceE
Q 048643 248 LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCC 327 (506)
Q Consensus 248 ~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~ 327 (506)
+.+|+++.++|++|.+.|+++|+++|++||+|+|+|++|+.+....+. .. .++|.++.++|||++.|.++|+
T Consensus 137 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~g~~g~g~ 208 (416)
T 3isl_A 137 --PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKV-DE-----WKIDAAIGGTQKCLSVPSGMAP 208 (416)
T ss_dssp --CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCSEEECCSSSTTCCCSSEEE
T ss_pred --CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcch-hh-----cCCCEEEecCccccCCCCCeEE
Confidence 348899999999999999999999999999999999999765443321 11 1689999999999999999999
Q ss_pred EEEeCchhHHhhhcCC----ccc--------cCCccccCCCccC---C----CCcccc-CCCC-CCchHHHHHHHHhchh
Q 048643 328 LWVKDPSALVSSLSTN----PEY--------LKNKATESKQVVD---Y----KDWQIT-LSRR-FRSLKLWLVIRNYGVA 386 (506)
Q Consensus 328 ~~~r~~~~l~~~~~~~----~~y--------l~~~~~~~~~~~~---~----~~~~~~-~sr~-~~al~~~~~l~~~G~~ 386 (506)
+++++.. . +.+... .+| ............+ + ....+. ++.. .....++.+++.+...
T Consensus 209 ~~~~~~~-~-~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 286 (416)
T 3isl_A 209 ITYNERV-A-DVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE 286 (416)
T ss_dssp EEECHHH-H-HHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEECHHH-H-HHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 9887542 2 222210 000 0000000000000 0 000111 1111 1224556667766667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-Cc
Q 048643 387 NLRHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GK 456 (506)
Q Consensus 387 g~~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 456 (506)
|++++.++..++++++.+.|++. +++ | .+++|++.... ...++.+.|.++ |+
T Consensus 287 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~L~~~~gi 348 (416)
T 3isl_A 287 GLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI-----------------DGESVRDMLLAQFGI 348 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC-----------------CHHHHHHHHHHHHCE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC-----------------CHHHHHHHHHHhCCE
Confidence 79999999999999999999985 776 2 56778764220 124566777666 76
Q ss_pred EEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 457 AYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 457 ~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
. +.+.. ..+..++|++++...+.+++|+++++.|+++.+++.
T Consensus 349 ~-v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 349 E-IASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp E-CBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred E-EecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 4 44332 233568999997667777669999999999987763
No 19
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.96 E-value=9.2e-27 Score=242.28 Aligned_cols=368 Identities=14% Similarity=0.100 Sum_probs=237.7
Q ss_pred ChhHHhhhCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccccCCCCC---CHHHHHHHHH--HhhcCCC-Cccccc
Q 048643 53 EPGYLRKRLPECAPYNPESMETILQDVQEHIVPGVTHWQSPNYFAYFPSSG---SIAGFLGEML--SSGFNVV-GFNWIS 126 (506)
Q Consensus 53 ~p~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~l--~~~~n~~-~~~~~~ 126 (506)
-|+.++.. +.++| +|.++.++++++.....++.. +|..|...+. ..|..+.+++ ...+... ....+.
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~ 102 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP-----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEV 102 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC-----CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGG
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC-----ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchh
Confidence 57788777 88899 789999999999876554422 2333332221 2233333333 1121111 111135
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
+++..+++.++.+++++++|++.. ++++++|+|.++..++.+.+-. ++..|+++...|+++..
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~-------~i~~~~g~taa~ea~~~a~~~~----------~gd~Viv~~~~h~s~~~ 165 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIA-------NASMYDGATALAEGVLLALRET----------GRMGVLVSQGVHPEYRA 165 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEE-------CSCBSSHHHHHHHHHHHHHHHH----------TCCEEEEETTSCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcc-------ceEEeCcHHHHHHHHHHHHhcC----------CCCEEEEcCccCHhHHH
Confidence 778889999999999999999754 5788898884443333333221 56678899999999886
Q ss_pred HH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 207 AA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 207 a~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
++ +..|+ +++.||.+ ++.+|+++ |.+ .+.+|+++++ |++|.++|+++|+++|+++|+|+
T Consensus 166 ~~~~~a~~~G~---~v~~v~~~---~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~v 228 (438)
T 1wyu_A 166 VLRAYLEAVGA---KLLTLPLE---GGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALF 228 (438)
T ss_dssp HHHHHHHHTTC---EEEEECCB---TTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCCC---EEEEEcCc---CCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEE
Confidence 55 45798 99999973 46888776 322 2568888887 99999999999999999999999
Q ss_pred Eeecc-cccccccCccchhhhcCCCCCCeeEEcCcc-----ccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 283 HVDAA-YAGSACICPEFQHFIDGVEGADSFSLNAHK-----WFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 283 hVDaA-~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK-----~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
|||.. ++.+.+..+ .. .++|.++++.|| |++.| ++|++++++. .. +.+ +.++.....+..+
T Consensus 229 ivd~d~~a~g~~~~~--~~-----~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~-~~l---~~~~~g~~~~~~~ 295 (438)
T 1wyu_A 229 VAVADPLSLGVLKPP--GA-----YGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FV-RQL---PGRLVSETVDVEG 295 (438)
T ss_dssp EEECCTTGGGTBCCH--HH-----HTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GG-GGC---CSCCEEEEEBTTS
T ss_pred EEEechhhccCcCCC--cc-----CCCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HH-HhC---CCceeccccccCC
Confidence 96643 222222222 11 169999999888 77788 8999998754 22 222 2222110000000
Q ss_pred ccCCC------Cc--cc-cCCCCC---C---chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----
Q 048643 357 VVDYK------DW--QI-TLSRRF---R---SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---- 414 (506)
Q Consensus 357 ~~~~~------~~--~~-~~sr~~---~---al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---- 414 (506)
...+. +. .. ..+... . ++..+..+..+|.+|++++.++..++++++.+.|+++++++ |
T Consensus 296 ~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 375 (438)
T 1wyu_A 296 RRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFF 375 (438)
T ss_dssp CEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBC
T ss_pred CcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeE
Confidence 00000 00 00 011111 1 22234447888899999999999999999999999998887 2
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEE-EeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAY-MTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+++|+.... ..++.++|.++|+.. +.++.+.+..++|++++ +.++++||++++++|++
T Consensus 376 ~~~~~~~~~~-------------------~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 376 NEFALALPKD-------------------PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEEDLLALREALKE 435 (438)
T ss_dssp SEEEEECSSC-------------------HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHHHHHHHHHHHHH
T ss_pred EEEEEeCCCC-------------------HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHHHHHHHHHHHHH
Confidence 3455654211 346677777778743 13333334578999996 67888999999999987
Q ss_pred H
Q 048643 494 Q 494 (506)
Q Consensus 494 ~ 494 (506)
+
T Consensus 436 ~ 436 (438)
T 1wyu_A 436 V 436 (438)
T ss_dssp H
T ss_pred H
Confidence 5
No 20
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.95 E-value=1.9e-26 Score=235.38 Aligned_cols=350 Identities=9% Similarity=0.047 Sum_probs=237.7
Q ss_pred CCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHH
Q 048643 92 SPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILC 171 (506)
Q Consensus 92 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~ 171 (506)
.|+++.+.|++...+..+.+.+..... .. ..+....+..++.+++++++|.+... ..++|+||++|+..
T Consensus 21 ~~~~~~~~p~p~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~gg~~al~~ 89 (393)
T 3kgw_A 21 VPTRLLLGPGPSNLAPRVLAAGSLRMI---GH--MQKEMLQIMEEIKQGIQYVFQTRNPL------TLVVSGSGHCAMET 89 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTCCCC---CT--TSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESCCTTTHHHH
T ss_pred CccceeccCCCCCCCHHHHHHhccccc---Cc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCcHHHHHH
Confidence 467778888776666655555544221 11 23555677888899999999987542 57899999999988
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEeCCCCch--HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 048643 172 TLTAARDRVLNKIGRENISKLVVYGSDQTHC--ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 172 al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~--s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 249 (506)
++.++.. ++..|+++...|+ .+...++..|. +++.+|.+. ++.+|+++|+++|++. .
T Consensus 90 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~i~~~-----~ 148 (393)
T 3kgw_A 90 ALFNLLE-----------PGDSFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKP--GEHYTLQEVEEGLAQH-----K 148 (393)
T ss_dssp HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----C
T ss_pred HHHhcCC-----------CCCEEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhC-----C
Confidence 8776632 5566777777776 44778888999 999999875 4589999999999873 1
Q ss_pred cEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEE
Q 048643 250 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLW 329 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~ 329 (506)
+.+|+++.++|++|.+.|+++|+++|++||+|+++|++|+.+....+. .. .++|.++.++||+++.|.++|+++
T Consensus 149 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~~-----~~~d~~~~s~sK~~~~~~g~g~~~ 222 (393)
T 3kgw_A 149 PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYM-DQ-----QGIDIMYSSSQKVLNAPPGISLIS 222 (393)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCCEEEEESSSTTCCCSSCEEEE
T ss_pred CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccch-hh-----cCCCEEEecCcccccCCCceeEEE
Confidence 347899999999999999999999999999999999999744332211 11 168999999999999899999998
Q ss_pred EeCchhHHhhhcC-Cc---cccCCccccCCCccC--CCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 048643 330 VKDPSALVSSLST-NP---EYLKNKATESKQVVD--YKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLF 402 (506)
Q Consensus 330 ~r~~~~l~~~~~~-~~---~yl~~~~~~~~~~~~--~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l 402 (506)
+++.. . +.+.. .. .+...... ....+. ........+.. .....+..++..+..++++++.++..++++++
T Consensus 223 ~~~~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 299 (393)
T 3kgw_A 223 FNDKA-K-YKVYSRKTKPVSFYTDITY-LAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHL 299 (393)
T ss_dssp ECHHH-H-HHHHTCSSCCSCSTTCHHH-HHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ECHHH-H-HHHhccCCCCCceeecHHH-HHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 86542 2 22211 10 11000000 000000 00000001111 12234456666666778899999999999999
Q ss_pred HHHHHcCCCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEEE
Q 048643 403 ERLVASDKRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAMR 471 (506)
Q Consensus 403 ~~~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR 471 (506)
.+.|++. +++ | .+++|++.... ...++.+.|.++ |+....+....+..++|
T Consensus 300 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR 361 (393)
T 3kgw_A 300 HKHLQEM-GLKFFVKDPEIRLPTITTVTVPAGY-----------------NWRDIVSYVLDHFSIEISGGLGPTEERVLR 361 (393)
T ss_dssp HHHHHHT-TCCBSSSSGGGBCSSEEEEECCTTB-----------------CHHHHHHHHHHHHCEECBCCCGGGTTTEEE
T ss_pred HHHHHHc-CCeeccCChhhcCCeEEEEeCCCCC-----------------CHHHHHHHHHHhCCEEEeCCcccCCCCEEE
Confidence 9999987 665 1 44557663220 124567777776 76433322223456899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
++++...+++++++++++.|+++.+++.+
T Consensus 362 i~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 362 IGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp EECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred EEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 99866667899999999999999887654
No 21
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.95 E-value=2.7e-26 Score=232.94 Aligned_cols=308 Identities=12% Similarity=0.115 Sum_probs=220.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
+..+.....+..++.+++++++|.+.+ ..++++||++|+..++.+......+ ++..|+++...|++
T Consensus 35 ~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~~~a~~~~~~~~~~~~~~-------~gd~vi~~~~~~~~ 100 (382)
T 4hvk_A 35 HSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANNLAIIGYAMRNAR-------KGKHILVSAVEHMS 100 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCTTE-------EEEEESSHHHHHHHHHHHHHHHHGG-------GCCEEEEETTCCHH
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEECCchHHHHHHHHHhhhhhcC-------CCCEEEECCCCcHH
Confidence 444456678888899999999999754 6899999999998888876532111 56678889999999
Q ss_pred HHHHHHHh---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 204 LQKAAQIV---GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 204 ~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
+..++..+ |+ +++.+|+++ ++.+|+++|++++++. +.+|+++.++|++|.+.|+++|+++|++||+
T Consensus 101 ~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~ 169 (382)
T 4hvk_A 101 VINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISEVLAGKAA 169 (382)
T ss_dssp HHHHHHHHHHTTC---EEEEECBCT--TSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE
T ss_pred HHHHHHHHHhcCC---EEEEeccCC--CCCcCHHHHHHHhccC------ceEEEEECCCCCceeeCCHHHHHHHHHHcCE
Confidence 98877664 88 999999975 5699999999998653 4589999999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
+|+|++|+.+....+. ... ++|.++.++||++ .|.|+|++++++...+. .++..... .
T Consensus 170 -li~D~a~~~~~~~~~~-~~~-----~~d~~~~s~~K~~-g~~g~g~~~~~~~~~~~-------~~~~~~~~----~--- 227 (382)
T 4hvk_A 170 -LHIDATASVGQIEVDV-EKI-----GADMLTISSNDIY-GPKGVGALWIRKEAKLQ-------PVILGGGQ----E--- 227 (382)
T ss_dssp -EEEECTTTBTTBCCCH-HHH-----TCSEEEEESGGGT-SCTTCEEEEEETTCCCC-------CSSCSSCT----G---
T ss_pred -EEEEhHHhcCCCCCCc-hhc-----CCCEEEEeHHHhc-CCCceEEEEEcCccCcC-------cccccCCC----c---
Confidence 9999999765543321 111 6899999999975 57789999998754211 11111000 0
Q ss_pred CCcccc-CCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCCCcccc
Q 048643 361 KDWQIT-LSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPKYENCH 429 (506)
Q Consensus 361 ~~~~~~-~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~ 429 (506)
.... .+.. .....+..+++ +..++++++.++..++++++.+.|+++|+++ | ++++|++....
T Consensus 228 --~~~~~~~~~~~~~~~~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 300 (382)
T 4hvk_A 228 --NGLRSGSENVPSIVGFGKAAE-ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIE---- 300 (382)
T ss_dssp --GGTSCSCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCC----
T ss_pred --CccccCCcCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCC----
Confidence 0000 1101 11122333344 2356889999999999999999999988876 2 47888875421
Q ss_pred cccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-------------C------EEEEEEEecCCCCCHHHHHHHHHH
Q 048643 430 SQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-------------G------IYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------g------~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
..++.+.|.+.|+....+.... + ..++|+++. ..+++++++++++.
T Consensus 301 --------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~t~e~i~~~~~~ 365 (382)
T 4hvk_A 301 --------------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEV 365 (382)
T ss_dssp --------------HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECC-TTCCHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcC-CCCCHHHHHHHHHH
Confidence 2456677777787432221110 0 468999995 66788899999999
Q ss_pred HHHHHHHHHc
Q 048643 491 VQEQLEAFLT 500 (506)
Q Consensus 491 l~~~~~~l~~ 500 (506)
|+++.+++.+
T Consensus 366 l~~~~~~~~~ 375 (382)
T 4hvk_A 366 LPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999888764
No 22
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.95 E-value=4.2e-26 Score=232.36 Aligned_cols=347 Identities=12% Similarity=0.037 Sum_probs=236.6
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTL 173 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al 173 (506)
.|+.+-.....++ .+.+.+...+.. .| ++....+..++.+++++++|.+.. ...++|+|||+|+..++
T Consensus 21 ~~l~~~~~~~~~~-~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~------~~v~~~~g~t~a~~~~~ 88 (386)
T 2dr1_A 21 YKLFTAGPVACFP-EVLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEKG------EVLLVPSSGTGIMEASI 88 (386)
T ss_dssp SEECCSSSCCCCH-HHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSSS------EEEEESSCHHHHHHHHH
T ss_pred ceeecCCCcCCcH-HHHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCC------cEEEEeCChHHHHHHHH
Confidence 4666543333333 344444444432 22 345578899999999999999721 15889999999998888
Q ss_pred HHHHHHHHHhhcccCCCCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 048643 174 TAARDRVLNKIGRENISKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPL 251 (506)
Q Consensus 174 ~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~ 251 (506)
.+... ++..|+++..+|++ +..+++..|+ +++.+|++. ++.+|+++|++++++. ..+.
T Consensus 89 ~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~----~~~~ 148 (386)
T 2dr1_A 89 RNGVS-----------KGGKVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEP--GKAVKPEDLDDALRKN----PDVE 148 (386)
T ss_dssp HHHSC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHC----TTCC
T ss_pred HHhhc-----------CCCeEEEEcCCchhHHHHHHHHHhCC---ceEEEecCC--CCCCCHHHHHHHHhcC----CCCc
Confidence 76532 55678888899998 8888999999 999999875 4689999999999652 1245
Q ss_pred EEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEe
Q 048643 252 FLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK 331 (506)
Q Consensus 252 ~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r 331 (506)
+|+++.++|++|.+.|+++|+++|++||+|+|+|++|+.+....+ . ... ++|.++.++||+++.|.++|+++++
T Consensus 149 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~di~~~s~sK~~~~~~g~G~~~~~ 222 (386)
T 2dr1_A 149 AVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-F----DKW-GLDVVFSSSQKAFGVPPGLAIGAFS 222 (386)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-T----TTT-TCSEEEEETTSTTCCCSSCEEEEEC
T ss_pred EEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-c----ccc-CCcEEEEeccccccCCCceEEEEEC
Confidence 788889999999999999999999999999999999986644222 1 111 6899999999999999889999987
Q ss_pred CchhHHhhhcC--CccccCCccccCCCccCCC-CccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHH
Q 048643 332 DPSALVSSLST--NPEYLKNKATESKQVVDYK-DWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLV 406 (506)
Q Consensus 332 ~~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~-~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l 406 (506)
+. .. +.+.. ...+...... ...... ......+.. .....++.+++.+... +++++.++..++++++.+.|
T Consensus 223 ~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L 297 (386)
T 2dr1_A 223 ER-FL-EIAEKMPERGWYFDIPL---YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGV 297 (386)
T ss_dssp HH-HH-HHHTTCTTCCSTTCHHH---HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HH-HHHhcCCCCceEEeHHH---HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 53 22 23321 0111110000 000000 000011111 1224455666666555 68899999999999999999
Q ss_pred HcCCCCc---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCC
Q 048643 407 ASDKRVS---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGAT 477 (506)
Q Consensus 407 ~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 477 (506)
++. +++ | .+++|++... ....++.++|.++|+....+....+..++|+++. .
T Consensus 298 ~~~-g~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~-~ 358 (386)
T 2dr1_A 298 REI-GLDILAEPGHESPTITAVLTPPG-----------------IKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHM-G 358 (386)
T ss_dssp HHT-TCCBSSCTTCBCSSEEEEECCTT-----------------CCHHHHHHHHHHTTEECEECCGGGTTTEEEEECC-S
T ss_pred HHc-CCeeCcCccccCCceEEEEcCCC-----------------CCHHHHHHHHHHCCeEEecCccccCCCEEEEECC-C
Confidence 987 666 2 4567766421 0135677778778764333222223468999995 4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHccC
Q 048643 478 LTEERHVMVAWTMVQEQLEAFLTTN 502 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~~~~l~~~~ 502 (506)
.+++++++++++.|+++.+++....
T Consensus 359 ~~~~~~i~~~~~~l~~~~~~~~~~~ 383 (386)
T 2dr1_A 359 YMKFEDIQEMLDNLREVINELKKQK 383 (386)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 6788899999999999988875543
No 23
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.95 E-value=1.4e-25 Score=229.31 Aligned_cols=348 Identities=12% Similarity=0.048 Sum_probs=231.3
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCT 172 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~a 172 (506)
++.+.+.+++...+..+.+.+...+.. .| ++.......++.+++++++|.+.+. ..++|+|||+|+..+
T Consensus 18 ~~~~~~~~g~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~~------~i~~~~g~t~a~~~~ 86 (393)
T 2huf_A 18 PNKLLMGPGPSNAPQRVLDAMSRPILG---HL--HPETLKIMDDIKEGVRYLFQTNNIA------TFCLSASGHGGMEAT 86 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHHH
T ss_pred CCeEEecCCCCCCCHHHHHHHHhhhcc---CC--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHHH
Confidence 444555555544445555555554432 22 3455677788899999999986532 578999999999888
Q ss_pred HHHHHHHHHHhhcccCCCCeEEEeCCCCchHH--HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 173 LTAARDRVLNKIGRENISKLVVYGSDQTHCAL--QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 173 l~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
+.++.. ++..|+++..+|++. .+.++..|. +++.+|+++ ++.+|+++|+++|++. .+
T Consensus 87 ~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~ 145 (393)
T 2huf_A 87 LCNLLE-----------DGDVILIGHTGHWGDRSADMATRYGA---DVRVVKSKV--GQSLSLDEIRDALLIH-----KP 145 (393)
T ss_dssp HHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----CC
T ss_pred HHHHhC-----------CCCEEEEECCCcchHHHHHHHHHcCC---eeEEEeCCC--CCCCCHHHHHHHHhcc-----CC
Confidence 877632 456778888889873 345566788 999999875 4689999999999862 13
Q ss_pred EEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEE
Q 048643 251 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 330 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~ 330 (506)
.+|+++.++|++|.+.|+++|+++|++||+|+|+|++++.+....+ . .. .++|.++.++|||++.|.|+|++++
T Consensus 146 ~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~sK~l~g~~G~G~~~~ 219 (393)
T 2huf_A 146 SVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-M----DR-WEIDAMYTGSQKVLGAPPGITPVSF 219 (393)
T ss_dssp SEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-T----TT-TTCSEEECCSSSTTCCCSSCEEEEE
T ss_pred cEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-h----hh-cCccEEEECCCcccccCCCeEEEEE
Confidence 3788899999999999999999999999999999999875433221 1 11 1589999999999998889999988
Q ss_pred eCchhHHhhhcCC----ccccCCccccC--CCccCCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 048643 331 KDPSALVSSLSTN----PEYLKNKATES--KQVVDYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFE 403 (506)
Q Consensus 331 r~~~~l~~~~~~~----~~yl~~~~~~~--~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~ 403 (506)
++ +.. +.+... .+|........ ........+. .++... ....+..+++.+..+++.++.++..++++++.
T Consensus 220 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 296 (393)
T 2huf_A 220 SH-RAV-ERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIY-HHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLY 296 (393)
T ss_dssp CH-HHH-HHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCC-SCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CH-HHH-HHHhhcCCCCceEEEchHHHHhhhccccccCCC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 63 332 333221 12221100000 0000000000 011111 11233345655555578889999999999999
Q ss_pred HHHHcCCCCc---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-ECCEEEEEE
Q 048643 404 RLVASDKRVS---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-CGGIYAMRF 472 (506)
Q Consensus 404 ~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~g~~~lR~ 472 (506)
+.|++. +++ | .+++|++.... + ..++.++|.++ |+. +.+.. ..+..++|+
T Consensus 297 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----------~-------~~~~~~~L~~~~gi~-v~~g~~~~~~~~~Ri 357 (393)
T 2huf_A 297 RGLQDA-GFELYADPKDRLSTVTTIKVPQGV----------D-------WLKAAQYAMKTYLVE-ISGGLGPTAGQVFRI 357 (393)
T ss_dssp HHHHHT-TCCBSSCGGGBCTTEEEEECCTTC----------C-------HHHHHHHHHHHHCEE-CBCCCGGGTTTEEEE
T ss_pred HHHHHc-CCeeccCccccCCcEEEEEcCCCC----------C-------HHHHHHHHHHhCCEE-EecCcccccCCEEEE
Confidence 999987 766 2 26667764210 0 24566666654 764 44332 224568999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 473 AVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 473 ~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+++.+.+++++|+++++.|+++.+++..
T Consensus 358 ~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 358 GLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp ECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred EcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 9966677898999999999999887643
No 24
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.94 E-value=1.3e-25 Score=229.58 Aligned_cols=328 Identities=13% Similarity=0.054 Sum_probs=226.9
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+.. .| ++...++..++.+++++++|.+.+. ..++|+|||+|+..++.++..
T Consensus 47 ~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~~------~v~~t~g~t~al~~~~~~~~~-------- 107 (393)
T 1vjo_A 47 PSVLQAMNVSPVG---HL--DPAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAMEATIANAVE-------- 107 (393)
T ss_dssp HHHHHHHSSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCchHHHHHHHHHhccC--------
Confidence 3345555554432 22 3446778889999999999996431 579999999999888877643
Q ss_pred cCCCCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 187 ENISKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..|+++..+|++ +..+++..|. +++.+|+++ ++.+|+++|++++++. .+.+|+++.++|++|.
T Consensus 108 ---~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~ 174 (393)
T 1vjo_A 108 ---PGDVVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPW--GEVFSLEELRTALETH-----RPAILALVHAETSTGA 174 (393)
T ss_dssp ---TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTE
T ss_pred ---CCCEEEEEcCChhHHHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHhhC-----CceEEEEeccCCCcce
Confidence 45677888889998 8999999999 999999975 4689999999999873 1337888999999999
Q ss_pred ccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-
Q 048643 265 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN- 343 (506)
Q Consensus 265 idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~- 343 (506)
+.|+++|+++|++||+|+++|++|+.+....+ +.. .++|.++.++||+++.|.++|++++++. .. +.+...
T Consensus 175 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~~-~~-~~~~~~~ 246 (393)
T 1vjo_A 175 RQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSSR-AI-EKLQRRR 246 (393)
T ss_dssp ECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECHH-HH-HHHHTCS
T ss_pred eccHHHHHHHHHHcCCEEEEECCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEEEEECHH-HH-HHHhccC
Confidence 99999999999999999999999984332211 111 2689999999999999989999998754 22 233111
Q ss_pred ---ccccCCccccCCCccCCCCccccC-CCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 344 ---PEYLKNKATESKQVVDYKDWQITL-SRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 344 ---~~yl~~~~~~~~~~~~~~~~~~~~-sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
.++....... .+ + ........ +.. .....+..+++.+..++++++.++..++++++.+.|++. +++ |
T Consensus 247 ~~~~~~~~~~~~~-~~-~-~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 322 (393)
T 1vjo_A 247 TKVANWYLDMNLL-GK-Y-WGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEK 322 (393)
T ss_dssp SCCSCSTTCHHHH-HH-H-HSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCG
T ss_pred CCCCceecCcHhh-hh-h-hccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCc
Confidence 1111100000 00 0 00000111 111 122345566666555678899999999999999999987 776 3
Q ss_pred -----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 -----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 -----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li 488 (506)
++++|++.... ...++.+.|.++ |+....+....+..++|+++....++++++++++
T Consensus 323 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~ 385 (393)
T 1vjo_A 323 EYRLPTLTTVCIPDGV-----------------DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLI 385 (393)
T ss_dssp GGBCSSEEEEECCTTC-----------------CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHH
T ss_pred cccCCcEEEEEcCCCC-----------------CHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHH
Confidence 35677663210 124567777776 8754333323345689999756778888999999
Q ss_pred HHHHHHH
Q 048643 489 TMVQEQL 495 (506)
Q Consensus 489 ~~l~~~~ 495 (506)
++|+++.
T Consensus 386 ~~l~~~l 392 (393)
T 1vjo_A 386 PALEQVL 392 (393)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998764
No 25
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.94 E-value=5.6e-26 Score=231.11 Aligned_cols=318 Identities=12% Similarity=0.071 Sum_probs=221.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH--H
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA--L 204 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s--~ 204 (506)
++....+..++.+++++++|.+... ...++|+|||+|+. ++.+... ++..|+++...|++ +
T Consensus 30 ~~~~~~~~~~~~~~la~~~~~~~~~-----~~v~~~~g~t~al~-~~~~~~~-----------~gd~vi~~~~~~~~~~~ 92 (384)
T 3zrp_A 30 SKEFVEALAYSLKGLRYVMGASKNY-----QPLIIPGGGTSAME-SVTSLLK-----------PNDKILVVSNGVFGDRW 92 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTS-----EEEEEESCHHHHHH-HGGGGCC-----------TTCEEEEECSSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCC-----cEEEEcCCcHHHHH-HHHhhcC-----------CCCEEEEecCCcchHHH
Confidence 4556778888999999999998621 16899999999998 7654422 56677778888876 5
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
...++..|. +++.+|++. ++.+|+++|++++++. .+.+|+++.++|++|.+.|+++|+++|++||+|+++
T Consensus 93 ~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 93 EQIFKRYPV---NVKVLRPSP--GDYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVV 162 (384)
T ss_dssp HHHHTTSSC---EEEEECCST--TCCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEE
T ss_pred HHHHHHcCC---cEEEecCCC--CCCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEE
Confidence 566777888 999999986 4689999999999872 145888999999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh-cC--CccccCCcc-ccC-CCccC
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL-ST--NPEYLKNKA-TES-KQVVD 359 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~--~~~yl~~~~-~~~-~~~~~ 359 (506)
|++|+.+....+. .. .++|.++.++||+++.|.++|++++++.. +. .+ .. ...|..... ... ...+.
T Consensus 163 D~a~~~~~~~~~~-~~-----~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T 3zrp_A 163 DGVSSVGAEEVKA-EE-----WNVDVYLTASQKALGSAAGLGLLLLSPKA-LS-ILDSQNSIAGYYLDLRNWLPVMRGAE 234 (384)
T ss_dssp ECTTTTTTSCCCT-TT-----TTCSEEEEETTSTTCCCSSEEEEEECHHH-HH-HHHHCCCSCCSTTCHHHHHHHHHHHH
T ss_pred ECcccccCccccc-cc-----cCCCEEEecCcccccCCCceEEEEECHHH-HH-HhcCCCCCCcccccHHHHHHHHHhhc
Confidence 9999765543221 11 16899999999999988999999886543 22 22 10 111111000 000 00000
Q ss_pred CCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-------ceEEEeecCCCccc
Q 048643 360 YKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-------SAVMDKLKPKYENC 428 (506)
Q Consensus 360 ~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-------~~v~f~~~~~~~~~ 428 (506)
.......++.. .....++.++..+...+++++.++..++++++.+.|++. +++ | .+++|++....
T Consensus 235 ~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--- 310 (384)
T 3zrp_A 235 EGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKVAD--- 310 (384)
T ss_dssp TTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSSSC---
T ss_pred ccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCCCC---
Confidence 00000001111 122445566777667778999999999999999999988 666 1 45667764321
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
..++.+.|.++|+. +.+.......++|+++. ..++++||+++++.|+++.+++..
T Consensus 311 ---------------~~~~~~~l~~~gi~-v~~g~~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~l~~~~~ 365 (384)
T 3zrp_A 311 ---------------PQKVLAGTVNEGVE-FAPGVHPAFKYFRIGHM-GWVTPNDAIIAISVIERTLRKLGE 365 (384)
T ss_dssp ---------------HHHHHHHHHTTTCC-CEECCCTTCCEEEEECC-SSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ---------------HHHHHHHHHHCCEE-EecCCCCCcCEEEEecc-ccCCHHHHHHHHHHHHHHHHHcCC
Confidence 34677778788864 33332111278999985 457888999999999999887753
No 26
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.94 E-value=6.1e-25 Score=224.46 Aligned_cols=345 Identities=12% Similarity=0.043 Sum_probs=231.3
Q ss_pred CCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHH
Q 048643 92 SPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILC 171 (506)
Q Consensus 92 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~ 171 (506)
++.|+.+-.....++ .+.+.+...+.. ..++.......++.+++++++|.+.+ ..++|+|||+|+..
T Consensus 8 ~~~yl~~~~~~~~~~-~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 8 DPVITLTAGPVNAYP-EVLRGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSNK-------PVILHGEPVLGLEA 74 (392)
T ss_dssp CCSEECSSSCCCCCH-HHHHHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSSC-------CEEESSCTHHHHHH
T ss_pred CcceeecCCCcCCCH-HHHHHHhccccc-----cccHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCCchHHHHH
Confidence 456776653333344 344444444432 12355566777888999999998744 68999999999988
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH--HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 048643 172 TLTAARDRVLNKIGRENISKLVVYGSDQTHCAL--QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 172 al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 249 (506)
++.++.. ++..|+++..+|++. .+.++..|. +++.+|+++ ++.+|+++|++++++. ..
T Consensus 75 ~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~----~~ 134 (392)
T 2z9v_A 75 AAASLIS-----------PDDVVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPY--NEAIDPQAVADMLKAH----PE 134 (392)
T ss_dssp HHHHHCC-----------TTCCEEEEESSHHHHHHHHHHHHHCS---CEEEEECCT--TSCCCHHHHHHHHHHC----TT
T ss_pred HHHHhcC-----------CCCEEEEecCCcccHHHHHHHHHcCC---ceEEeeCCC--CCCCCHHHHHHHHhcC----CC
Confidence 8877632 455677888899875 345566799 999999975 4589999999999752 12
Q ss_pred cEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEE
Q 048643 250 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLW 329 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~ 329 (506)
+.+|+++.++|+||.+.|+++|+++|++||+|+|+|++|+.+....+ ... . ++|.++.++|||++.|.|+|+++
T Consensus 135 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~----~-~~d~~~~s~sK~~~~~~g~G~l~ 208 (392)
T 2z9v_A 135 ITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-PED----C-KADIYVTGPNKCLGAPPGLTMMG 208 (392)
T ss_dssp CCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-GGG----G-TCSEEEECSSSTTCCCSCCEEEE
T ss_pred CcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-ccc----c-cceEEEecCcccccCCCceeEEE
Confidence 45788899999999999999999999999999999999976543322 111 1 58999999999999999999998
Q ss_pred EeCchhHHhhhcC-C--c--cccCCccccCCCccCCCCccc-cCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 048643 330 VKDPSALVSSLST-N--P--EYLKNKATESKQVVDYKDWQI-TLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLF 402 (506)
Q Consensus 330 ~r~~~~l~~~~~~-~--~--~yl~~~~~~~~~~~~~~~~~~-~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l 402 (506)
+++. .. +.+.. . + .|...... . . .+..... .++... ....+..+++.+...|++++.++..++++++
T Consensus 209 ~~~~-~~-~~l~~~~~g~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 282 (392)
T 2z9v_A 209 VSER-AW-AKMKANPLAPRASMLSIVDW-E-N--AWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAM 282 (392)
T ss_dssp ECHH-HH-HHHHTCTTSCCSSTTCSGGG-T-T--TTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ECHH-HH-HHhhhccCCCCceeccHHHH-H-h--hhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 8753 22 22221 1 1 11110000 0 0 0000000 111111 1134456666665566888999999999999
Q ss_pred HHHHHcCCCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEEE
Q 048643 403 ERLVASDKRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAMR 471 (506)
Q Consensus 403 ~~~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR 471 (506)
.+.|++. +++ | ++++|++.... ...++.+.|.++ |+....+....+..++|
T Consensus 283 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~L~~~~gi~v~~g~~~~~~~~lR 344 (392)
T 2z9v_A 283 RAGVTAM-GLSVWAASDSIASPTTTAVRTPDGV-----------------DEKALRQAARARYGVVFSSGRGETLGKLTR 344 (392)
T ss_dssp HHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTC-----------------CHHHHHHHHHHHHCEECEECCGGGTTTEEE
T ss_pred HHHHHHc-CCeeccCCccccCCceEEEECCCCC-----------------CHHHHHHHHHhcCCEEEecCCCCCCCCeEE
Confidence 9999887 665 2 45677763210 024566777776 86543332223456899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
+++..+.+++++|+++++.|+++.+++.
T Consensus 345 i~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 345 IGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp EECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred EeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 9964446788999999999999887654
No 27
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.94 E-value=2.4e-25 Score=226.34 Aligned_cols=307 Identities=11% Similarity=0.091 Sum_probs=217.6
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
|..++.......++.+++++++|.+.+ ..++|+|||+|+..++.+++..+.+ ++..|+++..+|++
T Consensus 35 ~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~l~~~~~~-------~gd~Vl~~~~~~~~ 100 (382)
T 4eb5_A 35 HSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANNLAIIGYAMRNAR-------KGKHILVSAVEHMS 100 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCTTE-------EEEEESSHHHHHHHHHHHHHHHHGG-------GCCEEEEETTCCHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEcCchHHHHHHHHHHHHhhccC-------CCCEEEECCCcchH
Confidence 444455677888899999999998754 6899999999999988887632111 45678889999999
Q ss_pred HHHHHHH---hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 204 LQKAAQI---VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 204 ~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
+..++.. .|+ +++.+|+++ ++.+|+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+
T Consensus 101 ~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 169 (382)
T 4eb5_A 101 VINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISEVLAGKAA 169 (382)
T ss_dssp HHHHHHHHTTTTC---EEEEECBCT--TSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSE
T ss_pred HHHHHHHHHhCCc---EEEEeccCC--CCccCHHHHHHHhcCC------CeEEEEeccCCCccccCCHHHHHHHHHHCCC
Confidence 9888775 477 899999875 5689999999988643 4578899999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
| |+|++|+.+....+ ... . ++|.++.++||++ .|.|+|++++++...+. .++.....
T Consensus 170 ~-i~D~a~~~g~~~~~-~~~----~-~~di~~~s~sK~~-g~~g~G~~~~~~~~~l~-------~~~~~~~~-------- 226 (382)
T 4eb5_A 170 L-HIDATASVGQIEVD-VEK----I-GADMLTISSNDIY-GPKGVGALWIRKEAKLQ-------PVILGGGQ-------- 226 (382)
T ss_dssp E-EEECTTTBTTBCCC-HHH----H-TCSEEEEETGGGT-CCSSCEEEEEETTCCCC-------CSSCSSCT--------
T ss_pred E-EEEcchhcCCcccC-ccc----c-CCCEEEeehHHhc-CCCceEEEEEccccccC-------ceecCCCc--------
Confidence 9 99999985433221 111 1 5799999999984 57789999988652111 11111000
Q ss_pred CCcccc-CCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCCCcccc
Q 048643 361 KDWQIT-LSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPKYENCH 429 (506)
Q Consensus 361 ~~~~~~-~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~ 429 (506)
..... .+.. .....+..+++.+ .++++++.++..++++++.+.|+++|+++ | ++++|++.+..
T Consensus 227 -~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 300 (382)
T 4eb5_A 227 -ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIE---- 300 (382)
T ss_dssp -GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTSC----
T ss_pred -cccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCcC----
Confidence 00000 1111 1113334455543 34788899999999999999999987776 2 36777764320
Q ss_pred cccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--------------------CCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 430 SQQLVTEEEAINEFNRELLESINASGKAYMTHAVC--------------------GGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------------~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
..++.+.|.+.|+. +.+... .+..++|+++ ...+++++|+++++
T Consensus 301 --------------~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~-~~~~~~~~i~~~~~ 364 (382)
T 4eb5_A 301 --------------GESIVLSLDMAGIQ-ASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTL-GRYNTDEDVDRLLE 364 (382)
T ss_dssp --------------HHHHHHHHHHHTCB-CBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEEC-CTTCCHHHHHHHHH
T ss_pred --------------HHHHHHHHHHCCEE-EeccccccCCCCcccHHHHHcCCChhccCCeEEEEC-CCCCCHHHHHHHHH
Confidence 23456666666764 333211 1246899997 46678889999999
Q ss_pred HHHHHHHHHHc
Q 048643 490 MVQEQLEAFLT 500 (506)
Q Consensus 490 ~l~~~~~~l~~ 500 (506)
.|+++.+++..
T Consensus 365 ~l~~~~~~~~~ 375 (382)
T 4eb5_A 365 VLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888765
No 28
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.94 E-value=1.2e-25 Score=229.93 Aligned_cols=350 Identities=12% Similarity=0.037 Sum_probs=234.0
Q ss_pred CCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHH
Q 048643 91 QSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL 170 (506)
Q Consensus 91 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l 170 (506)
..++.+.+.+++..++..+.+.+...+.. .| ++.......++.+++++++|.+.+. ..++|+|||+++.
T Consensus 15 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~g~t~al~ 83 (396)
T 2ch1_A 15 IIPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGME 83 (396)
T ss_dssp CCCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHH
T ss_pred CCCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCCc------EEEECCcHHHHHH
Confidence 34566666666555555555555544422 23 4444566677889999999987531 4789999999998
Q ss_pred HHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH--HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 048643 171 CTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ--KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGL 248 (506)
Q Consensus 171 ~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 248 (506)
.++.++.. ++..|+++..+|.+.. +.++..|. +++.||++. ++.+|+++|++++++.
T Consensus 84 ~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~----- 142 (396)
T 2ch1_A 84 AMLSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPP--DRPFSLETLARAIELH----- 142 (396)
T ss_dssp HHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TSCCCHHHHHHHHHHH-----
T ss_pred HHHHHhcC-----------CCCeEEEEcCCcccHHHHHHHHHcCC---ceEEecCCC--CCCCCHHHHHHHHHhC-----
Confidence 88776632 4557788888998874 57788899 999999875 5689999999999863
Q ss_pred ccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEE
Q 048643 249 VPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCL 328 (506)
Q Consensus 249 ~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~ 328 (506)
.+.+|+++.++|+||.+.|+++|+++|++||+++++|++|+.+....+ +... ++|.++.++||+++.|.++|++
T Consensus 143 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~ 216 (396)
T 2ch1_A 143 QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPI 216 (396)
T ss_dssp CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEE
T ss_pred CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEEE
Confidence 133788899999999999999999999999999999999984432211 1111 5799999999999999999988
Q ss_pred EEeCchhHHhhhcCC----ccccCCccc-cC-CCccCCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHH
Q 048643 329 WVKDPSALVSSLSTN----PEYLKNKAT-ES-KQVVDYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKL 401 (506)
Q Consensus 329 ~~r~~~~l~~~~~~~----~~yl~~~~~-~~-~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~ 401 (506)
++++. .+ ..+... ..++..... .. ........+ ...+... ....+..+++.+..++++++.++..+++++
T Consensus 217 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 293 (396)
T 2ch1_A 217 SISPK-AL-DVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKR-YHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQI 293 (396)
T ss_dssp EECHH-HH-HHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC-CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EECHH-HH-HhhhhccCcccceEechHHHHHhhhhhcccCC-CCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88653 22 233211 111111000 00 000000000 0111111 123445566665567888999999999999
Q ss_pred HHHHHHcCCCCc---c-c------eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEE
Q 048643 402 FERLVASDKRVS---P-S------AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAM 470 (506)
Q Consensus 402 l~~~l~~~~~~~---p-~------~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~l 470 (506)
+.+.|++. +++ | . +++|++.... ...++.++|.++ |+....+....+..++
T Consensus 294 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~L~~~~gi~v~~g~~~~~~~~i 355 (396)
T 2ch1_A 294 LYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV-----------------DWWKVSQYAMNNFSLEVQGGLGPTFGKAW 355 (396)
T ss_dssp HHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTC-----------------CHHHHHHHHHHHHCBCCBCCCGGGTTTEE
T ss_pred HHHHHHHC-CCeeccCCccccCCceEEEEcCCCC-----------------CHHHHHHHHHHhCCEEEecCccccCCCEE
Confidence 99999987 676 3 2 6777764210 024566666654 7643222212234689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 471 RFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
|++++.+.++++++++++++|+++.+++.
T Consensus 356 Ri~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 356 RVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp EEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 99996667789999999999999988764
No 29
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.94 E-value=1.3e-25 Score=225.65 Aligned_cols=335 Identities=10% Similarity=0.045 Sum_probs=223.9
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
+.|++...+..+.+.+...+.. ..++.....+.++.+++++++|.+.+. ...++|+|||+|+..++.+++
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMRG-----HLDPEVLRVNRAIQERLAALFDPGEGA-----LVAALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCCC-----TTCHHHHHHHHHHHHHHHHHHCCCTTC-----EEEEESSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCCC-----ceEEEcCCcHHHHHHHHHHhc
Confidence 3455444444455555554432 134666778889999999999986211 268999999999987776542
Q ss_pred HHHHHhhcccCCCCeEEEeCCCCchHH--HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 048643 178 DRVLNKIGRENISKLVVYGSDQTHCAL--QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCA 255 (506)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~ 255 (506)
+ ..|+++...|++. .+.++..|+ +++.+|+++ ++.+|+++|++++++. .+.+|++
T Consensus 74 ------------~-d~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~ 130 (353)
T 2yrr_A 74 ------------R-GPVLVLVNGAFSQRVAEMAALHGL---DPEVLDFPP--GEPVDPEAVARALKRR-----RYRMVAL 130 (353)
T ss_dssp ------------C-CCEEEEECSHHHHHHHHHHHHTTC---CEEEEECCT--TSCCCHHHHHHHHHHS-----CCSEEEE
T ss_pred ------------C-CcEEEEcCCCchHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHHhC-----CCCEEEE
Confidence 1 2466777788874 567788899 999999975 4689999999999862 2347888
Q ss_pred eccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 256 TIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 256 t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
+.++|++|.+.|+++|+++|++||+|+|+|++|+.+....+ ... . ++|.+++++|||++.|.|+|++++++..
T Consensus 131 ~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~----~-~~d~~~~s~~K~~~~~~g~G~~~~~~~~- 203 (353)
T 2yrr_A 131 VHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFS-MRA----M-GVDYAFTGSQKCLSAPPGLAPIAASLEA- 203 (353)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-HHH----H-TCSEEECCTTSTTCCCSSCEEEEECHHH-
T ss_pred EccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccc-ccc----c-CceEEEecCcccccCCCceEEEEECHHH-
Confidence 99999999999999999999999999999999964433221 111 1 5799999999999998899999887542
Q ss_pred HHhhhcCCc-cccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 336 LVSSLSTNP-EYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 336 l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
. +.+...+ .|+..... ..... .....++.. .....++.+++.+...+++++.++..++++++.+.|++. +++
T Consensus 204 ~-~~l~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 277 (353)
T 2yrr_A 204 R-KAFTGKRGWYLDLARV--AEHWE--RGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFR 277 (353)
T ss_dssp H-HHCCCCSCSTTCHHHH--HHHHT--TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred H-HHhccCCCccccHHHH--hhhhh--cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 2 2332111 11110000 00000 000011111 112344566666666678899999999999999999987 776
Q ss_pred ---c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHH
Q 048643 414 ---P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVM 485 (506)
Q Consensus 414 ---p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~ 485 (506)
| .+++|++.... ...++.+.|.++|+....+.......++|+++.... +++|++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~-~~~~~~ 339 (353)
T 2yrr_A 278 PYPKASPLPTVLVVRPPEGV-----------------DADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEG-ARREAY 339 (353)
T ss_dssp ESCSSSBCTTEEEEECCTTC-----------------CHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGG-SCHHHH
T ss_pred cccCccCCCeEEEEECCCCC-----------------CHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccC-CHHHHH
Confidence 2 45677763210 134577777777764333222223468999985444 555888
Q ss_pred -HHHHHHHHHHH
Q 048643 486 -VAWTMVQEQLE 496 (506)
Q Consensus 486 -~li~~l~~~~~ 496 (506)
++++.|+++.+
T Consensus 340 ~~~~~~l~~~l~ 351 (353)
T 2yrr_A 340 QAFLKALDRALA 351 (353)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 99999998764
No 30
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=1.1e-25 Score=235.90 Aligned_cols=316 Identities=9% Similarity=0.075 Sum_probs=220.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH----H
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA----L 204 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s----~ 204 (506)
....+..++.+|+++++|.+.+ ..++|+|+|+++..++.+... .+.++..|+++..+|++ +
T Consensus 108 ~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~al~~~~~~~~~--------~~~~~~~Vl~~~~~~~s~~~~~ 172 (465)
T 3e9k_A 108 PWITGDESIVGLMKDIVGANEK-------EIALMNALTVNLHLLMLSFFK--------PTPKRYKILLEAKAFPSDHYAI 172 (465)
T ss_dssp CGGGTTHHHHGGGHHHHTCCGG-------GEEECSCHHHHHHHHHHHHCC--------CCSSSCEEEEETTCCHHHHHHH
T ss_pred cHHHhHHHHHHHHHHHcCCCcC-------CEEEECCHHHHHHHHHHHhcc--------ccCCCCEEEEcCCcCCchHHHH
Confidence 3445666788999999999865 789999999888776665432 12245678889999987 4
Q ss_pred HHHHHHhCCCCCCe-----EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 205 QKAAQIVGIDLKNF-----RAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 205 ~ka~~~~G~g~~~v-----~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
...++..|+ ++ ..+|.+ +++.+|+++|+++|++... .+.+|+++.++|++|.+.|+++|+++|++||
T Consensus 173 ~~~~~~~G~---~~~~~~v~~~~~~--~~~~~d~~~l~~~i~~~~~---~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g 244 (465)
T 3e9k_A 173 ESQLQLHGL---NIEESMRMIKPRE--GEETLRIEDILEVIEKEGD---SIAVILFSGVHFYTGQHFNIPAITKAGQAKG 244 (465)
T ss_dssp HHHHHHTTC---CHHHHEEEECCCT--TCSSCCHHHHHHHHHHHGG---GEEEEEEESBCTTTCBBCCHHHHHHHHHHTT
T ss_pred HHHHHHcCC---cceeeeEEEecCC--CCCccCHHHHHHHHHhcCC---CeEEEEEeCcccCcceeecHHHHHHHHHHcC
Confidence 446777888 64 334544 3579999999999986421 3568999999999999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhc-CCccccCCccccC---
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATES--- 354 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~--- 354 (506)
+++|+|+||+.+....+-. .. ++|.+++++||+++ .|.++|+++++++.. ..+. ....|........
T Consensus 245 ~~vi~D~a~~~g~~~~~~~-~~-----~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~--~~~~~~~~g~~~~~~~~~~~~ 316 (465)
T 3e9k_A 245 CYVGFDLAHAVGNVELYLH-DW-----GVDFACWCSYKYLNAGAGGIAGAFIHEKHA--HTIKPALVGWFGHELSTRFKM 316 (465)
T ss_dssp CEEEEECTTTTTTSCCCHH-HH-----TCCEEEECSSSTTCCCTTCCCEEEECGGGT--TTSCCSSCCGGGBCHHHHTTC
T ss_pred CEEEEEhhhhcCCcCCchh-hc-----CCCEEEECcccccccCCCceEEEEEcHHHH--hhcCCcccCccCCCCCccccc
Confidence 9999999998776654321 11 78999999999995 788899999865421 1121 1111111100000
Q ss_pred --CCccCCCCccccCCCC--CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----------CCCc---c---
Q 048643 355 --KQVVDYKDWQITLSRR--FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----------KRVS---P--- 414 (506)
Q Consensus 355 --~~~~~~~~~~~~~sr~--~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----------~~~~---p--- 414 (506)
...+......++.+.. .....++.++..+...+++++.++..++++++.+.|++. ++++ |
T Consensus 317 ~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~ 396 (465)
T 3e9k_A 317 DNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHV 396 (465)
T ss_dssp CSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSG
T ss_pred CCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCH
Confidence 0000000011122211 224567778887777789999999999999999999885 6776 2
Q ss_pred ----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 ----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 ----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
++++|++... ..++.+.|.++|++. . ..+..++|+++++..++++||+++++.
T Consensus 397 ~~~g~~~~~~~~~~-------------------~~~l~~~L~~~Gi~v-~---~~~~~~iRis~~~~~~t~edi~~~~~~ 453 (465)
T 3e9k_A 397 EERGCQLTITFSVP-------------------NKDVFQELEKRGVVC-D---KRNPNGIRVAPVPLYNSFHDVYKFTNL 453 (465)
T ss_dssp GGBCSCEEEEECCT-------------------TCCHHHHHHTTTEEC-E---EETTTEEEEBCCTTTCCHHHHHHHHHH
T ss_pred hhcccEEEEEecCC-------------------HHHHHHHHHHCCEEE-e---cCCCCEEEEeCcccCCCHHHHHHHHHH
Confidence 5788877522 135667777788643 2 334568999987788899999999999
Q ss_pred HHHHHHHH
Q 048643 491 VQEQLEAF 498 (506)
Q Consensus 491 l~~~~~~l 498 (506)
|+++.++.
T Consensus 454 l~~~l~~~ 461 (465)
T 3e9k_A 454 LTSILDSA 461 (465)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHhc
Confidence 99987643
No 31
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.94 E-value=1.4e-24 Score=224.17 Aligned_cols=338 Identities=12% Similarity=0.109 Sum_probs=229.0
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcC--CC-C---c-ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFN--VV-G---F-NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 166 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n--~~-~---~-~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 166 (506)
-|+++..+++.++. +.+.+...+. .. . . .+..+........++.+++++++|.+.+ ..++|+|||
T Consensus 24 iyld~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~ggt 95 (423)
T 3lvm_A 24 IYLDYSATTPVDPR-VAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGAT 95 (423)
T ss_dssp EECBTTTCCCCCHH-HHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSHH
T ss_pred EeecCCCcCCCCHH-HHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCChH
Confidence 45555444444444 4444544443 21 1 1 2233345567778899999999999765 789999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 048643 167 EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV---GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLD 243 (506)
Q Consensus 167 ~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~ 243 (506)
+|+..++.++++.+.+ ++..|+++..+|.++..++..+ |+ +++.+|+++ ++.+|+++|+++|++.
T Consensus 96 ~a~~~a~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 96 ESDNLAIKGAANFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQR--NGIIDLKELEAAMRDD 163 (423)
T ss_dssp HHHHHHHHHHHHHHTT-------TCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCT--TSCCCHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHhhcc-------CCCEEEECCccchHHHHHHHHHHHcCC---EEEEeccCC--CCccCHHHHHHhcCCC
Confidence 9999998877653211 4667888999999998888655 88 999999875 5799999999998653
Q ss_pred HhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC
Q 048643 244 VEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL 323 (506)
Q Consensus 244 ~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~ 323 (506)
+.+|+++.++|++|.+.|+++|+++|++||+|+++|++|+++....+.. .. ++|.++.++||+ +.|.
T Consensus 164 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~-----~~-~~di~~~s~sK~-~g~~ 230 (423)
T 3lvm_A 164 ------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLS-----QL-KVDLMSFSGHKI-YGPK 230 (423)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTT-----TS-CCSEEEEESTTT-TSCS
T ss_pred ------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChh-----hc-CCCEEEechHHh-cCCC
Confidence 4588899999999999999999999999999999999998765432211 11 589999999995 4577
Q ss_pred cceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 048643 324 DCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLF 402 (506)
Q Consensus 324 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l 402 (506)
++|++++++... ..+ ..+...... ...+ . ..+.. .....+..+++.+. +.++++.++..++++++
T Consensus 231 g~G~~~~~~~~~--~~~---~~~~~~~~~----~~~~---~-~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l 296 (423)
T 3lvm_A 231 GIGALYVRRKPR--VRI---EAQMHGGGH----ERGM---R-SGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRL 296 (423)
T ss_dssp SCEEEEECBTTB--CCC---CCSSCSSCT----TTTT---C-CSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEecccc--CCC---CccccCCcc----cccc---c-CCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 899998875421 111 111111000 0000 0 01111 11123334444432 34788999999999999
Q ss_pred HHHHHcCCCCc---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---------
Q 048643 403 ERLVASDKRVS---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC--------- 464 (506)
Q Consensus 403 ~~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------- 464 (506)
.+.|+++|+++ + ++++|++.... ..++.+.|.+ +.+.+...
T Consensus 297 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~~~l~~---i~v~~g~~~~~~~~~~~ 355 (423)
T 3lvm_A 297 WNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE------------------GESLIMALKD---LAVSSGSACTSASLEPS 355 (423)
T ss_dssp HHHHTTSTTEEEESCSTTBCTTEEEEEETTSC------------------HHHHHHHTTT---EECBCCCC-----CCCC
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEeCCCC------------------HHHHHHHHhh---heeccCccccCCCcccc
Confidence 99999988877 2 57888874321 2344555544 34433211
Q ss_pred --------C---CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 465 --------G---GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 465 --------~---g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
. ...++|+++. ..+++++|+++++.|+++.+++.+
T Consensus 356 ~~~~~~g~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 356 YVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHHHHTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCccccCceEEEECC-CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 0 1368999995 677888999999999999887754
No 32
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.94 E-value=7e-26 Score=228.49 Aligned_cols=337 Identities=12% Similarity=0.046 Sum_probs=226.1
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHH
Q 048643 95 YFAYFPSSGSIAGFLGEMLSSGFNVVG-FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTL 173 (506)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al 173 (506)
++.+.|++...+..+.+.+...+.... .....+|...++.+++.+++++++|.+... ..++|+|||+|+..++
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~v~~~~g~t~al~~~~ 78 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNY------EVLFLASATEIWERII 78 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTE------EEEEESCHHHHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCchHHHHHHH
Confidence 556777765555444444433332222 122356777888899999999999996432 6899999999998777
Q ss_pred HHHHHHHHHhhcccCCCCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 048643 174 TAARDRVLNKIGRENISKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPL 251 (506)
Q Consensus 174 ~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~ 251 (506)
.+... + .+++....|++ +...++..|+ +++.+|.+. ++.+|+++|+ +.+ .+.
T Consensus 79 ~~l~~-----------~--~~i~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~--~~~------~~~ 132 (362)
T 3ffr_A 79 QNCVE-----------K--KSFHCVNGSFSKRFYEFAGELGR---EAYKEEAAF--GKGFYPADIT--VPA------DAE 132 (362)
T ss_dssp HHHCS-----------S--EEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCGGGCC--CCT------TCC
T ss_pred HhccC-----------C--cEEEEcCcHHHHHHHHHHHHhCC---CeEEEecCC--CCCCCHHHHh--ccC------Ccc
Confidence 66532 4 33334455665 4456777898 999999874 4699999998 322 345
Q ss_pred EEEEeccCCCCCcccChhHHHHHHHHh-CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEE
Q 048643 252 FLCATIGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 330 (506)
Q Consensus 252 ~Vv~t~gtt~tG~idpl~~I~~ia~~~-g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~ 330 (506)
+|+++.++|++|.+.|+++|+++|++| |+|+|+|++|+.+....+ +..+|.++.++|||+++|.|+|++++
T Consensus 133 ~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~--------~~~~d~~~~s~~K~~~~~~G~g~~~~ 204 (362)
T 3ffr_A 133 IICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFD--------WTKIDSVFFSVQKCFGLPAGLGVWIL 204 (362)
T ss_dssp EEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCC--------TTSCSEEEEETTSTTCCCSCCEEEEE
T ss_pred EEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccC--------hhHCcEEEEecccccCCCCceEEEEE
Confidence 888899999999999999999999999 999999999976543322 12489999999999998889999887
Q ss_pred eCchhHHhhhcCC-----ccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 048643 331 KDPSALVSSLSTN-----PEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 331 r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~ 404 (506)
++.. ........ ..|....... .. .........+.. .....++.+++.+..++++++.++..++++++.+
T Consensus 205 ~~~~-~~~~~~~~~gg~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 280 (362)
T 3ffr_A 205 NDRV-IEKSKALLAKRKSIGTYHTIPSM-LE--KARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINT 280 (362)
T ss_dssp EHHH-HHHHHHHHHTTCCCCSTTSHHHH-HH--HHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CHHH-HHHhhhccccCCCCcccccHHHH-HH--HhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 7542 11111100 1111100000 00 000000011111 1224555666666666789999999999999999
Q ss_pred HHHcCCCCc---c-------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEe
Q 048643 405 LVASDKRVS---P-------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAV 474 (506)
Q Consensus 405 ~l~~~~~~~---p-------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~ 474 (506)
.|+++|+++ | .+++|++... ..++.+.|.++|+....+....+..++|+++
T Consensus 281 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~ 341 (362)
T 3ffr_A 281 YIESSKVFSFGVEDAKLRSMTTIVANTTML-------------------PGEINKILEPFDMAVGAGYGSKKETQIRIAN 341 (362)
T ss_dssp HHHHCSSEEESSSCGGGBCSSEEEEEESSC-------------------HHHHHHHHGGGTEEEEECSGGGTTTEEEEEC
T ss_pred HHHHccCceeccCChhhcCCceEEEecCCC-------------------HHHHHHHHHHCCeEEecCccccCCCEEEEEC
Confidence 999998876 1 5666766431 3567788888887544333333456899999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 048643 475 GATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 475 ~~~~tt~edi~~li~~l~~~~ 495 (506)
. ..+++++|++++++|+++.
T Consensus 342 ~-~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 342 F-PAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp C-TTSCHHHHHHHHHHHHHHT
T ss_pred C-CCCCHHHHHHHHHHHHHHh
Confidence 5 4678889999999998763
No 33
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=3.3e-25 Score=222.80 Aligned_cols=331 Identities=13% Similarity=0.016 Sum_probs=224.0
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHH
Q 048643 99 FPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARD 178 (506)
Q Consensus 99 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~ 178 (506)
.|++..++..+.+.+...+.. ..++.......++.+++++++|.+.+ ..++|+|||+|+..++.++..
T Consensus 6 ~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~ 73 (352)
T 1iug_A 6 TPGPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLFA 73 (352)
T ss_dssp SSSSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHCC
T ss_pred cCCCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCCc-------eEEEcCchHHHHHHHHHhccC
Confidence 344444444555666655542 13455666777889999999998754 689999999999888877632
Q ss_pred HHHHhhcccCCCCeEEEeCCCCchHHH--HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 179 RVLNKIGRENISKLVVYGSDQTHCALQ--KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
++..|+++..+|++.. +.++..|. +++.+|+++ ++.+|+++|++ + .+.+|+++
T Consensus 74 -----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~---~------~~~~v~~~ 128 (352)
T 1iug_A 74 -----------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPY--GDTPRPEDVAK---E------GYAGLLLV 128 (352)
T ss_dssp -----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCTTTSCC---S------SCSEEEEE
T ss_pred -----------CCCeEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHhc---c------CCcEEEEE
Confidence 4567888888999865 45566788 999999875 46899998876 1 24478889
Q ss_pred ccCCCCCcccChhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCch
Q 048643 257 IGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS 334 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 334 (506)
.++|++|.+.|+++|+++|++| |+|+|+|++|+.+....+ ... . ++|.++.++|||++.|.|+|++++++..
T Consensus 129 ~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~~----~-~~d~~~~s~~K~~~~~~g~G~~~~~~~~ 202 (352)
T 1iug_A 129 HSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-LEA----M-GVDAAASGSQKGLMCPPGLGFVALSPRA 202 (352)
T ss_dssp SEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-SGG----G-TCSEEEEESSSTTCCCSCEEEEEECHHH
T ss_pred EecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-ccc----c-CeeEEEecCcccccCCCceeEEEECHHH
Confidence 9999999999999999999999 999999999975443222 111 1 5899999999999999999999886542
Q ss_pred hHHhhhcCCccccCCccccCCCccCCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 335 ALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+ +.+.. ..|...... ... .........+... ....+..++..+... ++++.++..++++++.+.|++. +++
T Consensus 203 -~-~~~~~-~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~ 274 (352)
T 1iug_A 203 -L-ERLKP-RGYYLDLAR-ELK--AQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLR 274 (352)
T ss_dssp -H-HTCCC-CSSTTCHHH-HHH--HHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred -H-HHhhC-CCceeeHHH-HHh--hcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 2 22211 111100000 000 0000000111111 112344555554444 8889999999999999999987 776
Q ss_pred ---c----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-ECCEEEEEEEecCCCCCHHHHH
Q 048643 414 ---P----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-CGGIYAMRFAVGATLTEERHVM 485 (506)
Q Consensus 414 ---p----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~edi~ 485 (506)
| ++++|++.... ...++.+.|.++|+. +.+.. ..+..++|+++. ..+++++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~gi~-v~~~~~~~~~~~iRi~~~-~~~~~~~i~ 335 (352)
T 1iug_A 275 PVPKRFSPAVAAFYLPEGV-----------------PYARVKEAFAQRGAV-IAGGQGPLKGKVFRLSLM-GAYDRYEAL 335 (352)
T ss_dssp ESCSSBCTTCEEEECCTTC-----------------CHHHHHHHHHTTTEE-CEECCGGGTTTEEEECCC-SSCCHHHHH
T ss_pred ccccccCCeEEEEEcCCCC-----------------CHHHHHHHHHHCCEE-EEeCCCccCCCEEEEEcc-ccCCHHHHH
Confidence 2 56777764210 024577777788764 44332 123468999995 466788999
Q ss_pred HHHHHHHHHHHHHH
Q 048643 486 VAWTMVQEQLEAFL 499 (506)
Q Consensus 486 ~li~~l~~~~~~l~ 499 (506)
++++.|+++.+++.
T Consensus 336 ~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 336 GVAGMFREVLEEIL 349 (352)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988763
No 34
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.93 E-value=5.4e-24 Score=216.41 Aligned_cols=306 Identities=12% Similarity=0.134 Sum_probs=210.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA 207 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka 207 (506)
........++.+++++++|.+.+ ..++++|||+|+..++.+++....+ ++..|+++..+|+++...
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~~-------~gd~vl~~~~~~~~~~~~ 105 (384)
T 1eg5_A 40 IEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESINWILKTVAETFEK-------RKRTIITTPIEHKAVLET 105 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHHHHHHHHHHHHTTT-------TCCEEEECTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC-------eEEEECCHHHHHHHHHHhhhhhccC-------CCCEEEECCCCchHHHHH
Confidence 34466777888999999998754 6899999999999888887631000 556788899999988776
Q ss_pred H---HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC--CEE
Q 048643 208 A---QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG--IWV 282 (506)
Q Consensus 208 ~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g--~~l 282 (506)
+ +..|. +++.+|+++ ++.+|+++|++++++. +.+|+++.++|++|.+.|+++|+++|++|| +|+
T Consensus 106 ~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~l 174 (384)
T 1eg5_A 106 MKYLSMKGF---KVKYVPVDS--RGVVKLEELEKLVDED------TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLV 174 (384)
T ss_dssp HHHHHHTTC---EEEECCBCT--TSCBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEE
T ss_pred HHHHHhcCC---EEEEEccCC--CCccCHHHHHHHhCCC------CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEE
Confidence 6 66788 899999875 5789999999998643 457888999999999999999999999999 999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
|+|++|+.+....+ +... .+|.++.++||+++ |.|+|++++++...+. .++...... ..
T Consensus 175 i~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~~g-~~G~G~~~~~~~~~~~-------~~~~~~~~~-------~~ 233 (384)
T 1eg5_A 175 HVDAVQTIGKIPFS-----LEKL-EVDYASFSAHKFHG-PKGVGITYIRKGVPIR-------PLIHGGGQE-------RG 233 (384)
T ss_dssp EEECTTTTTTSCCC-----CTTT-CCSEEEEEGGGGTS-CTTCEEEEECTTSCCC-------CSBCSSCTT-------TT
T ss_pred EEEhhhhcCCcccC-----chhc-CCCEEEecHHHhcC-CCceEEEEEcCCCccc-------cccccCccc-------cc
Confidence 99999973322111 1122 58999999999855 5568999887642011 111110000 00
Q ss_pred ccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCCCccccccc
Q 048643 363 WQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 363 ~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~ 432 (506)
....+.. .....++.+++.+ .++++++.++..++++++.+.|++ ++++ | ..+.|.+.+.
T Consensus 234 -~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~-------- 302 (384)
T 1eg5_A 234 -LRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPNI-------- 302 (384)
T ss_dssp -TBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTTC--------
T ss_pred -ccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCC--------
Confidence 0011111 1112334455542 457888999999999999999988 5766 2 4677766432
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeee-EC-------------------CEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAV-CG-------------------GIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~-------------------g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+ ..++.+.|.+.|+. +.+.. +. +..++|+++ .+.++++||+++++.|+
T Consensus 303 ---~-------~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~ 370 (384)
T 1eg5_A 303 ---R-------GSTLQNLLSGYGIY-VSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISL-CKYNTEEEVDYFLKKIE 370 (384)
T ss_dssp ---C-------HHHHHHHHHHTTEE-CBC------------CHHHHTTCCHHHHHHEEEEEC-CTTCCHHHHHHHHHHHH
T ss_pred ---C-------HHHHHHHHhhCCeE-EeccccccCCCCcchHHHHHcCCChhhcCCeEEEEC-CCCCCHHHHHHHHHHHH
Confidence 0 24566677777764 44321 11 146899998 45678889999999999
Q ss_pred HHHHHHHccC
Q 048643 493 EQLEAFLTTN 502 (506)
Q Consensus 493 ~~~~~l~~~~ 502 (506)
++.+++.+..
T Consensus 371 ~~~~~~~~~~ 380 (384)
T 1eg5_A 371 EILSFLDLTG 380 (384)
T ss_dssp HHHHHC----
T ss_pred HHHHHHHhhc
Confidence 9988876543
No 35
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.93 E-value=1.1e-24 Score=221.30 Aligned_cols=335 Identities=8% Similarity=-0.013 Sum_probs=219.8
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH
Q 048643 98 YFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 177 (506)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar 177 (506)
+.|++...+..+.+.+...+.. ..++....+..++.+++++++|.+.+. ...++++|||+++..++.+..
T Consensus 23 ~~pgp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~~~ggt~al~~~~~~~~ 92 (376)
T 3f0h_A 23 FTVGPVMSSEEVRAIGAEQVPY-----FRTTEFSSTMLENEKFMLEYAKAPEGS-----KAVFMTCSSTGSMEAVVMNCF 92 (376)
T ss_dssp CSSSSCCCCHHHHHHHTSCCCC-----CSSHHHHHHHHHHHHHHHHHHTCCTTC-----EEEEESSCHHHHHHHHHHHHC
T ss_pred ecCCCCCCcHHHHHHhcCCCCC-----CCCHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCChhHHHHHHHHhcc
Confidence 3466555555555555543321 124566778888999999999997542 134458889999988877654
Q ss_pred HHHHHhhcccCCCCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 048643 178 DRVLNKIGRENISKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCA 255 (506)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~ 255 (506)
. ++..|+++...+++ +.+.+...|. +++.+|.+. ++.+|+++|+++++++ +.+|++
T Consensus 93 ~-----------~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~ 150 (376)
T 3f0h_A 93 T-----------KKDKVLVIDGGSFGHRFVQLCEIHEI---PYVALKLEH--GKKLTKEKLYEYDNQN------FTGLLV 150 (376)
T ss_dssp C-----------TTCCEEEEESSHHHHHHHHHHHHTTC---CEEEEECCT--TCCCCHHHHHTTTTSC------CCEEEE
T ss_pred C-----------CCCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHhhccC------ceEEEE
Confidence 3 44445555555554 2345677788 999999875 4699999999876432 447888
Q ss_pred eccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 256 TIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 256 t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
+.++|++|.+.|+++|+++|++||+|+|+|++++.+....+ .... ++|.++.++||+++.|.|+|++++++..
T Consensus 151 ~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~~~~-----~~d~~~~s~~K~l~~~~G~g~~~~~~~~- 223 (376)
T 3f0h_A 151 NVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN-MNEC-----GADVMITGSQKVLACPPGISVIVLAPRG- 223 (376)
T ss_dssp ESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEEETTTTTCCCSSCEEEEECHHH-
T ss_pred ecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc-cccc-----CccEEEecCcccccCCCceEEEEECHHH-
Confidence 88999999999999999999999999999999987654332 1111 5899999999999988899998776542
Q ss_pred HHhhhcC--CccccCCccccCCCccCCCCccccCCCCC-CchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 336 LVSSLST--NPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 336 l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
. +.+.. ...+....... .. .........+-.. ....+..++..+..+ +++++.++..++++++.+.|++. +
T Consensus 224 ~-~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~ 298 (376)
T 3f0h_A 224 V-ERVEKSKVRTMYFDLKDA-LK--NQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-P 298 (376)
T ss_dssp H-HHHHTCCCCCSTTCHHHH-HH--HHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-S
T ss_pred H-HHhhcCCCCceeecHHHH-Hh--hcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 2 22221 11111110000 00 0000000011111 113455666666666 78999999999999999999987 4
Q ss_pred Cc---c----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeee-eECCEEEEEEEecCCCCCHH
Q 048643 412 VS---P----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHA-VCGGIYAMRFAVGATLTEER 482 (506)
Q Consensus 412 ~~---p----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~~g~~~lR~~~~~~~tt~e 482 (506)
++ + .++.+...+. ...++.+.|.++ |+. +.+. ...+..++|+++. ..++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~------------------~~~~l~~~l~~~~gi~-v~~g~~~~~~~~lRis~~-~~~t~e 358 (376)
T 3f0h_A 299 FELVSESPANGVTSVHPTTA------------------NAYDIFLKLKDEYGIW-ICPNGGEMKDTIFRVGHI-GALTHE 358 (376)
T ss_dssp EEECCSSBBTTEEEEEESSS------------------CHHHHHHHHHHHSSEE-CEECCGGGTTTCEEEECC-SSCCHH
T ss_pred CccCccccCceEEEEeCCCC------------------CHHHHHHHHHHhCCEE-EecCccccCCCEEEEecC-CCCCHH
Confidence 55 1 4444443221 134667777777 664 4333 1224568999984 457888
Q ss_pred HHHHHHHHHHHHHH
Q 048643 483 HVMVAWTMVQEQLE 496 (506)
Q Consensus 483 di~~li~~l~~~~~ 496 (506)
+|++++++|+++.+
T Consensus 359 ~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 359 DNTTLVNAFKDLQK 372 (376)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 36
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.93 E-value=3.8e-24 Score=220.35 Aligned_cols=316 Identities=11% Similarity=0.070 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHHHcCC-CCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH----HH
Q 048643 131 TELENIVMDWLGQMLKL-PKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA----LQ 205 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s----~~ 205 (506)
.....++.+++++++|. +.+ ..++|+|||+|+..++.+++....+ ++..|+++..+|.+ +.
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~~-------~gd~Vl~~~~~~~~~~~~~~ 136 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPR-------EIVYTRNATEAINLVAYSWGMNNLK-------AGDEIITTVMEHHSNLVPWQ 136 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHCC-------TTCEEEEETTCCGGGTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-------eEEEcCChHHHHHHHHHHhhhcccC-------CCCEEEECcchhHHHHHHHH
Confidence 45566778899999998 433 7899999999999888887421111 45678888899988 56
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
..++..|+ +++.+|++. ++.+|+++|++++++. +.+|+++.++|++|.+.|+++|+++|++||+|+|+|
T Consensus 137 ~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 205 (420)
T 1t3i_A 137 MVAAKTGA---VLKFVQLDE--QESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVD 205 (420)
T ss_dssp HHHHHHCC---EEEEECBCT--TSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhcCc---EEEEeccCC--CCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEE
Confidence 77788899 999999874 5789999999998643 457889999999999999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCc-cccCCcc-ccCCCccCCCCc
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNP-EYLKNKA-TESKQVVDYKDW 363 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~yl~~~~-~~~~~~~~~~~~ 363 (506)
++|+.+.... ..... +.|.++.++||. +.|.|+|++++++ +. .+.+.... ....... ......+....+
T Consensus 206 ~a~~~~~~~~-~~~~~-----~~di~~~s~sK~-~~~~g~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (420)
T 1t3i_A 206 ACQSAPHYPL-DVQLI-----DCDWLVASGHKM-CAPTGIGFLYGKE-EI-LEAMPPFFGGGEMIAEVFFDHFTTGELPH 276 (420)
T ss_dssp CTTTTTTSCC-CHHHH-----TCSEEEEEGGGT-TSCTTCEEEEECH-HH-HHHSCCCSCSTTSEEEECSSCEEECCTTG
T ss_pred hhhccCCccC-chhhc-----CCCEEEEehhhh-cCCCceEEEEEch-HH-HhhcCceecCCCccccccccccCCCCchh
Confidence 9998654422 12221 589999999995 4577789888864 32 22332110 0000000 000000000011
Q ss_pred cccC-CCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--------ceEEEeecCCCccccc
Q 048643 364 QITL-SRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--------SAVMDKLKPKYENCHS 430 (506)
Q Consensus 364 ~~~~-sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--------~~v~f~~~~~~~~~~~ 430 (506)
.+.. +... ..+.++.+++.+...+++++.++..++++++.+.|++.++++ | ++++|.+.+.
T Consensus 277 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------ 350 (420)
T 1t3i_A 277 KFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGL------ 350 (420)
T ss_dssp GGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTB------
T ss_pred hccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCC------
Confidence 1111 1111 112333356666556788999999999999999999987776 2 2566665321
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeee--------ECC-EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAYMTHAV--------CGG-IYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g-~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+ ..++.+.|.+.|+. +.+.. ..+ ..++|+++. ..++++|+++++++|+++.+++.+
T Consensus 351 -----~-------~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 351 -----H-------ASDVATMVDQDGIA-IRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp -----C-------HHHHHHHHHTTTEE-CBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred -----C-------HHHHHHHHHHCCeE-EeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHHhcC
Confidence 0 23566777777764 44331 113 578999985 567888999999999999887643
No 37
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.93 E-value=3.9e-24 Score=215.84 Aligned_cols=308 Identities=10% Similarity=0.047 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH-HHHHHHH
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA-LQKAAQI 210 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ka~~~ 210 (506)
....++.+++++++|.+.+. ...++|+|||+|+..++.+++.. ++.+++++...|.+ +..++..
T Consensus 37 ~~~~~l~~~la~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~~----------gd~vi~~~~~~~~~~~~~~~~~ 101 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSALGP----------QDKVLIVSNGAYGARMVEMAGL 101 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHSCCT----------TCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcC-----cEEEEecChHHHHHHHHHHhcCC----------CCeEEEEeCCCccHHHHHHHHH
Confidence 44456677888888843221 25899999999999888776431 33455666678876 5677888
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|+ +++.+|++. ++.+|+++|+++|++.. .+.+|+++.++|++|.+.|+++|+++|++||+|+|+|++|+.
T Consensus 102 ~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~ 172 (366)
T 1m32_A 102 MGI---AHHAYDCGE--VARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF 172 (366)
T ss_dssp HTC---CEEEEECCT--TSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred hCC---ceEEEeCCC--CCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 899 999999875 46899999999998631 144677888999999999999999999999999999999975
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCCCccCCCCccc-cCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESKQVVDYKDWQI-TLS 368 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~-~~s 368 (506)
+....+ . .. .++|.++.++|||++.|.|+|++++++.. .+.+... ..|...... .+..+.. ...
T Consensus 173 ~~~~~~-~----~~-~~~di~~~s~~K~~~~~~g~G~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 238 (366)
T 1m32_A 173 GGIPMD-I----AA-LHIDYLISSANKCIQGVPGFAFVIAREQK--LAACKGHSRSLSLDLYA------QWRCMEDNHGK 238 (366)
T ss_dssp TTSCCC-T----TT-TTCSEEEEESSSTTCCCSSEEEEEEEHHH--HTTCTTCCSCSTTCHHH------HHHHHHHTTTC
T ss_pred cCcCcc-c----cc-cCccEEEecCcccccCCCceEEEEECHHH--HHhhcCCCCCccccHHH------HHhhhcccCCC
Confidence 543221 1 11 15899999999999889899999987532 2222211 111110000 0000000 011
Q ss_pred CCC--C---chHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc---c------ceEEEeecCC-Cccccccc
Q 048643 369 RRF--R---SLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS---P------SAVMDKLKPK-YENCHSQQ 432 (506)
Q Consensus 369 r~~--~---al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~---p------~~v~f~~~~~-~~~~~~~~ 432 (506)
+++ . ...+..+++.+...| ++++.++..++++++.+.|++. +++ | .+++|++... +
T Consensus 239 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------- 310 (366)
T 1m32_A 239 WRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQ------- 310 (366)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTT-------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCC-------
Confidence 111 1 134455666655555 7889999999999999999987 665 2 3677776420 0
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
....++.+.|.++|+ ++.+....+..++|+++. ..+++++|++++++|+++.+
T Consensus 311 ---------~~~~~~~~~l~~~gi-~v~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 311 ---------YRFSEFYRRLKEQGF-VIYPGKVSQSDCFRIGNI-GEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp ---------CCHHHHHHHHHHTTE-ECEECCCSSSCEEEEECC-SSCCHHHHHHHHHHHHHHCT
T ss_pred ---------CCHHHHHHHHHHCCE-EEECCcCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence 013456777777776 444443335678999985 56678899999999988754
No 38
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.93 E-value=5.2e-24 Score=214.49 Aligned_cols=316 Identities=12% Similarity=0.096 Sum_probs=212.3
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+.. |..+.....++.++.+|+++++|.+.+ ..++|+|||+|+..++.+++.
T Consensus 29 ~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~--------- 88 (359)
T 1svv_A 29 KILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACSLALR--------- 88 (359)
T ss_dssp HHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc-------cEEEeCCchHHHHHHHHHHhC---------
Confidence 344455544442 223344567888999999999997654 689999999999988887754
Q ss_pred CCCCeEEEeCCCCchHHHH--HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-hcCCccEEEEEeccCCCCCc
Q 048643 188 NISKLVVYGSDQTHCALQK--AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV-EAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~k--a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..|+++..+|.++.. .++..|. +++.+|.+ ++.+|+++|++++++.. +.+..+.+|+++.+ |++|.
T Consensus 89 --~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~ 159 (359)
T 1svv_A 89 --PWEAVIATQLGHISTHETGAIEATGH---KVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGT 159 (359)
T ss_dssp --TTEEEEEETTSHHHHSSTTHHHHTTC---CEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSC
T ss_pred --CCCEEEEcccchHHHHHHHHHhcCCC---eeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCce
Confidence 56788899999999988 4788899 99999985 47999999999998641 22334667878877 68999
Q ss_pred ccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh
Q 048643 265 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 265 idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~ 340 (506)
+.| +++|+++|++||+|+|+|++|+++.+..........++ ..+|++++++||+++ |.++|++++++. .. +.+
T Consensus 160 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~-~~~~g~l~~~~~-~~-~~~ 236 (359)
T 1svv_A 160 QYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG-MFGEALIILNDA-LK-PNA 236 (359)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC-SSCEEEEECSGG-GC-TTH
T ss_pred ecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC-CCceEEEEEccc-HH-HHH
Confidence 988 99999999999999999999955422111111100000 268999999999854 788898887543 21 111
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--- 414 (506)
.. +.... .+....+. ... ......+..++++++.++..++++++.+.| +.++++ |
T Consensus 237 ~~---~~~~~-----------~~~~~~~~--~~~--~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~ 297 (359)
T 1svv_A 237 RH---LIKQR-----------GALMAKGW--LLG--IQFEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSAS 297 (359)
T ss_dssp HH---HHHHT-----------TCCCTTTH--HHH--HHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSS
T ss_pred HH---HHhcC-----------Ccccccch--hhH--HHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCcc
Confidence 10 00000 00000000 001 111233555677889999999999999999 556776 4
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
+++.+++. .++.++|.++ |+... +....+..++|+++ +..+++++|+++++.|++
T Consensus 298 ~~~~~~~~----------------------~~~~~~l~~~~gi~v~-~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~~ 353 (359)
T 1svv_A 298 NQLFPILE----------------------NTMIAELNNDFDMYTV-EPLKDGTCIMRLCT-SWATEEKECHRFVEVLKR 353 (359)
T ss_dssp SEECBEEE----------------------HHHHHHHTTTEECEEE-EEETTTEEEEEEEC-CTTCCHHHHHHHHHHHHH
T ss_pred ceEEEEcC----------------------HHHHHHHHHhcCEEEE-ecccCCCceEEEEc-cCcCCHHHHHHHHHHHHH
Confidence 44433321 2567778777 87542 22224678999997 566788999999999998
Q ss_pred HHHHH
Q 048643 494 QLEAF 498 (506)
Q Consensus 494 ~~~~l 498 (506)
+.+++
T Consensus 354 ~~~~~ 358 (359)
T 1svv_A 354 LVAST 358 (359)
T ss_dssp C----
T ss_pred HHhcc
Confidence 76543
No 39
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.92 E-value=1.2e-23 Score=215.56 Aligned_cols=315 Identities=16% Similarity=0.122 Sum_probs=212.8
Q ss_pred hHHHHHHHHHHHHHHcCC-CCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH----
Q 048643 130 ATELENIVMDWLGQMLKL-PKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL---- 204 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~---- 204 (506)
......++.+++++++|. +.+ ..++|+|||+|+..++.+++....+ ++..|+++..+|++.
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~~-------~gd~vl~~~~~~~~~~~~~ 130 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAE-------ELVFVRGTTEGINLVANSWGNSNVR-------AGDNIIISQMEHHANIVPW 130 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHCC-------TTCEEEEETTCCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCC-------eEEEeCChhHHHHHHHHHhhhhcCC-------CCCEEEEecccchHHHHHH
Confidence 355666788899999998 333 7899999999999988887532111 456788888888764
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
...++..|. +++.+|.++ ++.+|+++|++++++. +.+|+++.++|++|.+.|+++|+++|++||+++++
T Consensus 131 ~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 131 QMLCARVGA---ELRVIPLNP--DGTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLV 199 (406)
T ss_dssp HHHHHHHTC---EEEEECBCT--TSCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCC---EEEEEecCC--CCCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEE
Confidence 345677899 999999875 4689999999998643 45788999999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCc-c--ccCCccccCCCccCCC
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNP-E--YLKNKATESKQVVDYK 361 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~--yl~~~~~~~~~~~~~~ 361 (506)
|++|+.+....+ .... +.|.++.++||++ .|.|+|++++++ +. .+.+.... . |...........+...
T Consensus 200 D~~~~~g~~~~~-~~~~-----~~d~~~~s~~K~~-g~~G~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (406)
T 1kmj_A 200 DGAQAVMHHPVD-VQAL-----DCDFYVFSGHKLY-GPTGIGILYVKE-AL-LQEMPPWEGGGSMIATVSLSEGTTWTKA 270 (406)
T ss_dssp ECTTTTTTSCCC-HHHH-----TCSEEEEEGGGTT-SCTTCEEEEECH-HH-HHHCCCSSCSTTSEEEEETTTEEEECCT
T ss_pred EchhhcCCCCCc-cccc-----CCCEEEEEchhcc-CCCCcEEEEEeH-HH-HhhcCCcccCCCceeecccccccccCCC
Confidence 999987544222 2111 5899999999988 566789998863 32 22332110 0 0000000000000000
Q ss_pred CccccC-CCCCC-chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecCCCccccccc
Q 048643 362 DWQITL-SRRFR-SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 362 ~~~~~~-sr~~~-al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~~~~~~~~~ 432 (506)
.+.++. +.... ...+..+++.+...+++++.++..++++++.+.|++.|+++ | ++++|.+.+.
T Consensus 271 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-------- 342 (406)
T 1kmj_A 271 PWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKH-------- 342 (406)
T ss_dssp TGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTC--------
T ss_pred chhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCC--------
Confidence 011111 11111 12333455655556788889999999999999999988776 2 5677765321
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeee---------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAV---------CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+ ..++.+.|.+.|+. +.+.. +....++|+++. ..++++|+++++++|+++.+.+
T Consensus 343 ---~-------~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 343 ---H-------AYDVGSFLDNYGIA-VRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp ---C-------HHHHHHHHHHTTEE-CEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred ---C-------HHHHHHHHhhCCcE-EEeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHhh
Confidence 0 23466677777864 43332 122478999995 5668889999999999987764
No 40
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.92 E-value=3.6e-24 Score=218.55 Aligned_cols=328 Identities=10% Similarity=0.053 Sum_probs=222.6
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+......|... ..++++++.+|+++.+|++.+. ...++|+||++++..++.+...
T Consensus 44 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~i~~~~g~~~a~~~~~~~l~~--------- 107 (391)
T 3dzz_A 44 EIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE-----DWCVFASGVVPAISAMVRQFTS--------- 107 (391)
T ss_dssp HHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEECCCHHHHHHHHHHHhCC---------
Confidence 33444444554433344332 6889999999999999954331 2789999999999888776532
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT-KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV- 265 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i- 265 (506)
++..|+++..+|.++..+++..|. +++.+|.+ .++++.+|+++|++++++. .+.+|+++.++|++|.+
T Consensus 108 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~~ 177 (391)
T 3dzz_A 108 --PGDQILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYAW 177 (391)
T ss_dssp --TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBCC
T ss_pred --CCCeEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCccc
Confidence 566788999999999999999999 99999986 2345679999999999631 24578888999999999
Q ss_pred --cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcC-CCCCC--eeEEcCccccC-CCCcceEEEEeCchhHHhh
Q 048643 266 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDG-VEGAD--SFSLNAHKWFF-TTLDCCCLWVKDPSALVSS 339 (506)
Q Consensus 266 --dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~g-i~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 339 (506)
+++++|+++|++||+++|+|++|+++............. .+..| .++.++||+++ ....+|+++++++.... .
T Consensus 178 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~-~ 256 (391)
T 3dzz_A 178 SEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRA-R 256 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHH-H
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHH-H
Confidence 889999999999999999999998655432111111111 11256 78889999997 55778998887665432 2
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---c-
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS---P- 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~---p- 414 (506)
+........ ...........+..++.. +.+.++++.++..++++++.+.|++ +|+++ |
T Consensus 257 ~~~~~~~~~----------------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 319 (391)
T 3dzz_A 257 AEESFFLAG----------------IGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSN 319 (391)
T ss_dssp HHHHHHHHT----------------CSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCC
T ss_pred HHHHHHhhc----------------cCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccC
Confidence 211000000 000111122233334443 4566888999999999999999998 88887 3
Q ss_pred -ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 -SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 -~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
+. +.+.+...+ ....++.+.|. +.|+....+..+ .+..++|++++ +++++|+++++
T Consensus 320 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~ 380 (391)
T 3dzz_A 320 ASYLAWVDISALG----------------MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA---CPKELVIDGMQ 380 (391)
T ss_dssp BSSEEEEECGGGC----------------SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC---SCHHHHHHHHH
T ss_pred ceEEEEEehhhcC----------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHH
Confidence 33 334543210 01245666664 667643332222 23578999985 47889999999
Q ss_pred HHHHHHHHH
Q 048643 490 MVQEQLEAF 498 (506)
Q Consensus 490 ~l~~~~~~l 498 (506)
.|.++.+++
T Consensus 381 ~l~~~l~~~ 389 (391)
T 3dzz_A 381 RLKQGVLNL 389 (391)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999887654
No 41
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.92 E-value=1.1e-24 Score=223.08 Aligned_cols=345 Identities=11% Similarity=0.057 Sum_probs=204.0
Q ss_pred CCCccccCCCCCCHHHHHHH---HHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 92 SPNYFAYFPSSGSIAGFLGE---MLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 92 ~p~~~~~~~~~~~~~~~~~~---~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
+..|+++...++.++.++.. .+...+.+....+..+.....+..++.+++++++|.+.+ ..++++||++|
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~g~t~a 92 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-------ELIFTSGATES 92 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-------GEEEESCHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEeCCHHHH
Confidence 34566655444444443322 222222222223334445567778899999999999754 68999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCe-EEEeCCCCchHHHHHHHHh---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 048643 169 ILCTLTAARDRVLNKIGRENISKL-VVYGSDQTHCALQKAAQIV---GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV 244 (506)
Q Consensus 169 ~l~al~~ar~~~~~~~~~~~~~~~-~v~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~ 244 (506)
+..++.+++....+ ++. .|+++...|+++...+..+ |. +++.+|+++ ++.+|+++|+++|++.
T Consensus 93 l~~~~~~l~~~~~~-------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~- 159 (400)
T 3vax_A 93 NNIALLGLAPYGER-------TGRRHIITSAIEHKAVLEPLEHLAGRGF---EVDFLTPGP--SGRISVEGVMERLRPD- 159 (400)
T ss_dssp HHHHHHTTHHHHHH-------HTCCEEEEETTSCHHHHHHHHHHHTTTC---EEEEECCCT--TCCCCHHHHHTTCCTT-
T ss_pred HHHHHHHHHHhhcc-------CCCCEEEECccccHhHHHHHHHHHhcCC---eEEEEccCC--CCCcCHHHHHHhcCCC-
Confidence 99888877532111 455 7888889999988777664 77 899999875 5799999999998653
Q ss_pred hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc
Q 048643 245 EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD 324 (506)
Q Consensus 245 ~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~ 324 (506)
+.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+ +..+ +|.++.++||+ +.|.+
T Consensus 160 -----~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~~s~~K~-~g~~g 226 (400)
T 3vax_A 160 -----TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMISISGHKI-GAPKG 226 (400)
T ss_dssp -----EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEEEETGGG-TSCSS
T ss_pred -----ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEEEeHHHh-CCCCc
Confidence 45899999999999999999999999999999999999975543221 2223 89999999995 55778
Q ss_pred ceEEE-EeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchH---HHHHHHHhchhHHHHHHHHHHHHHH
Q 048643 325 CCCLW-VKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLK---LWLVIRNYGVANLRHFLRSHVNMAK 400 (506)
Q Consensus 325 ~g~~~-~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~---~~~~l~~~G~~g~~~~i~~~~~~a~ 400 (506)
+|+++ ++++......... .+++..... ......+ ...... +..+++.+ .++++++.++..++++
T Consensus 227 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~-~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~ 294 (400)
T 3vax_A 227 VGALVTRRREEMDDERVPL-EPIMFGGGQ---------ERKLRPG-TLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRS 294 (400)
T ss_dssp CEEEEECBCSSSTTCBCCC-CCSSCSSCT---------GGGTSCS-CCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHH
T ss_pred eEEEEEecchhcccccccc-CceecCCCc---------eeeeecC-CCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 99999 8874322100000 111111000 0000000 011122 22333332 4578899999999999
Q ss_pred HHHHHHHcCCCCc---c------ceEEEeecCCCcccccccccchHHHHHHHHHHHH-HHHHhcCcEEEeeee-------
Q 048643 401 LFERLVASDKRVS---P------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELL-ESINASGKAYMTHAV------- 463 (506)
Q Consensus 401 ~l~~~l~~~~~~~---p------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~------- 463 (506)
++.+.|+ .++++ | +++.|++... +. .++.+.+. .-+...|..+.....
T Consensus 295 ~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~ 359 (400)
T 3vax_A 295 RLLAGLA-STSFQVNGDQDHVVPHILNLSFEDV-----------DA---EAFLVTLKDLVAVATGSASTSASFTPSHVLR 359 (400)
T ss_dssp HHHHHHT-TTTCEECSCTTSBCTTEEEEECTTC-----------CH---HHHHHHHHHHHHHTTTTEEEEEEECCHHHHH
T ss_pred HHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCC-----------CH---HHHHHHHhcCcEEEecccccCCCCCccHHHH
Confidence 9999999 77877 2 4777776532 11 12222222 112233433322110
Q ss_pred ---EC---CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 464 ---CG---GIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 464 ---~~---g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.. ...++|+++++..+++++|++++++|+++.+
T Consensus 360 ~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 360 AMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp TTTCCHHHHTSEEEEEEEEC-------------------
T ss_pred HcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 00 0368999993356677899999999998764
No 42
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=7e-24 Score=215.78 Aligned_cols=350 Identities=11% Similarity=0.033 Sum_probs=222.2
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCT 172 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~a 172 (506)
|+.+.+.|++...+..+.+.+...... .+ +|.......++++++++.++..... .....++|+|||+|+..+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~g~t~al~~~ 75 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG---HT--SPEFVSIFQRVLKNTRAVFKSAAAS---KSQPFVLAGSGTLGWDIF 75 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC---TT--SHHHHHHHHHHHHHHHHHTTCCGGG---TCEEEEEESCTTHHHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc---cC--CHHHHHHHHHHHHHHHHHhCCCCCC---CCceEEEcCchHHHHHHH
Confidence 456777777666655555555544432 12 5555556666788888888864210 012689999999999888
Q ss_pred HHHHHHHHHHhhcccCCCCeEEEeCC--CCchHHHHHHHHhCCCCCCeEEEec-CCCCCcccCHHHHHHHHHHHHhcCCc
Q 048643 173 LTAARDRVLNKIGRENISKLVVYGSD--QTHCALQKAAQIVGIDLKNFRAIKT-TKSSSYGLSPDSLLTQINLDVEAGLV 249 (506)
Q Consensus 173 l~~ar~~~~~~~~~~~~~~~~v~~s~--~~H~s~~ka~~~~G~g~~~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~ 249 (506)
+.++... + .++..|++.. ..|.++.++++..|. +++.+|+ +. ++.+|+++|+++|++. .
T Consensus 76 ~~~~~~~------~--~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~d~~~l~~~l~~~-----~ 137 (385)
T 2bkw_A 76 ASNFILS------K--APNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKI--GESVPLELITEKLSQN-----S 137 (385)
T ss_dssp HHHHSCT------T--CSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSST--TSCCCHHHHHHHHHHS-----C
T ss_pred HHHHhcc------C--CCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCC--CCCCCHHHHHHHHhcC-----C
Confidence 8776310 0 0334444442 345555678888899 9999998 64 5789999999999761 1
Q ss_pred cEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceE
Q 048643 250 PLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCC 327 (506)
Q Consensus 250 p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~ 327 (506)
+.+|+++.++|++|.+.|+++|+++|++| |+|+|+|++|+.+....+ . ... ++|.++.++|||++.|.|+|+
T Consensus 138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~d~~~~s~~K~~~~~~G~G~ 211 (385)
T 2bkw_A 138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-F----DEW-GVDFALTASQKAIGAPAGLSI 211 (385)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-T----TTT-TCSEEEEESSSTTCCCSCEEE
T ss_pred CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-c----ccc-CceEEEecCccccccCCcceE
Confidence 34788899999999999999999999999 999999999975543222 1 111 589999999999998889999
Q ss_pred EEEeCchhHHhhhc-----CCccccCCccc-cCC-CccCCCCccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHH
Q 048643 328 LWVKDPSALVSSLS-----TNPEYLKNKAT-ESK-QVVDYKDWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMA 399 (506)
Q Consensus 328 ~~~r~~~~l~~~~~-----~~~~yl~~~~~-~~~-~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a 399 (506)
++++++. +.+.+. ....|...... ... ...........++.. .....+..+++.+...++.++.++..+++
T Consensus 212 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (385)
T 2bkw_A 212 SLCSSRF-MDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS 290 (385)
T ss_dssp EEECHHH-HHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEcHHH-HHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 9886543 220221 01111110000 000 000000000001111 11234445566555556888899999999
Q ss_pred HHHHHHH-HcCCCCc---c--------ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--C
Q 048643 400 KLFERLV-ASDKRVS---P--------SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC--G 465 (506)
Q Consensus 400 ~~l~~~l-~~~~~~~---p--------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~ 465 (506)
+++.+.| ++. +++ | ++++|++.. ..++.+.|.+.|+ .+.+... .
T Consensus 291 ~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~l~~~gi-~v~~g~~~~~ 348 (385)
T 2bkw_A 291 DWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD--------------------PPDVIAFLKSHGV-VIAGGIHKDI 348 (385)
T ss_dssp HHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC--------------------HHHHHHHHHHTTE-ECBCCCCTTT
T ss_pred HHHHHHHHHhc-CceecccCcccccCCceEEEecCC--------------------HHHHHHHHHHCCe-EEeCCCCccc
Confidence 9999999 876 554 1 345555421 2456677777776 4444322 2
Q ss_pred CEEEEEEE-ec-C-CCCCHHHHHHHHHHHHHHHHH
Q 048643 466 GIYAMRFA-VG-A-TLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 466 g~~~lR~~-~~-~-~~tt~edi~~li~~l~~~~~~ 497 (506)
+..++|++ +. + +.++++||+++++.|+++.++
T Consensus 349 ~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 349 GPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp GGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 35789999 53 1 246788999999999987654
No 43
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.92 E-value=7.2e-24 Score=216.40 Aligned_cols=325 Identities=12% Similarity=0.091 Sum_probs=220.9
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...++.....|...+...++++.+.+|+.+.+|++.+. ...++|+||++|+..++.++..
T Consensus 47 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~--------- 112 (388)
T 1j32_A 47 HIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE--------- 112 (388)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC---------
Confidence 34444444443333345555567899999999999999975331 2789999999999888877633
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-- 265 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-- 265 (506)
++..|+++..+|.++..+++..|. +++.+|.++++++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 113 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~ 181 (388)
T 1j32_A 113 --PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVYT 181 (388)
T ss_dssp --TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCC
Confidence 456788889999999999999999 999999875335789999999998643 4477888899999998
Q ss_pred -cChhHHHHHHHHhCCEEEeecccccccccCcc---chhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 266 -DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE---FQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 266 -dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~---~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
+++++|+++|++||+|+++|++|+++..-... ...........|.+..++||+++.| +.+|++++++. +.+.+
T Consensus 182 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l 259 (388)
T 1j32_A 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP--LVKAA 259 (388)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH--HHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH--HHHHH
Confidence 55999999999999999999999875432111 1111000124788999999999744 44898887543 22222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
.....+. +.....+..++++..+ +.+.++++.++..++++++.+.|++.|+++ |
T Consensus 260 ~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 319 (388)
T 1j32_A 260 TKIQGHS--------------------TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPD 319 (388)
T ss_dssp HHHHHTT--------------------TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCC
T ss_pred HHHHhhc--------------------ccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCC
Confidence 1100000 0001223334443333 456788889999999999999999988887 3
Q ss_pred -ceEEE-eecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 415 -SAVMD-KLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 415 -~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+.+++ ++...+ ....++.+.|.+ .|+....+..+....++|+++. +++++|+++++.|
T Consensus 320 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~i~~~~~~l 380 (388)
T 1j32_A 320 GAFYMFPSIAKTG----------------RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERL 380 (388)
T ss_dssp BTTEECCBCGGGT----------------CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHH
T ss_pred eeEEEEEecCCCC----------------CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec---CCHHHHHHHHHHH
Confidence 43333 332100 012456666665 5764433322322468999984 4788999999999
Q ss_pred HHHHHHH
Q 048643 492 QEQLEAF 498 (506)
Q Consensus 492 ~~~~~~l 498 (506)
+++.+++
T Consensus 381 ~~~l~~~ 387 (388)
T 1j32_A 381 EKFLHGI 387 (388)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9887765
No 44
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.92 E-value=3.2e-24 Score=218.69 Aligned_cols=309 Identities=11% Similarity=0.103 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH----
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK---- 206 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k---- 206 (506)
.....++.+.+++++|.+.+ ..++|+|||+|+..++.+++-. ++..|+++..+|.+...
T Consensus 58 ~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~----------~gd~vl~~~~~~~~~~~~~~~ 120 (390)
T 1elu_A 58 QQLIAQLRQALAETFNVDPN-------TITITDNVTTGCDIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQA 120 (390)
T ss_dssp HHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHHHHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHH-------HEEEeCChHHHHHHHHhCCCCC----------CCCEEEEecCcccHHHHHHHH
Confidence 35566777889999998654 6899999999998887776311 45678888899988654
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHH----HhCCEE
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAK----QFGIWV 282 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~----~~g~~l 282 (506)
.++..|. +++.+|.+...++.+|+++|+++|++. +.+|+++.++|++|.+.|+++|+++|+ +||+++
T Consensus 121 ~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~l 191 (390)
T 1elu_A 121 IAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRV 191 (390)
T ss_dssp HHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEE
T ss_pred HHHHhCc---EEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEE
Confidence 3577899 999999863235789999999988643 457888999999999999999999999 999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCCCccCCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESKQVVDYK 361 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~ 361 (506)
++|++|+.+....+ +.. ...|.++.++|||++.|.++|++++++.. . +.+... ..+-..........+.+.
T Consensus 192 i~Dea~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~ 263 (390)
T 1elu_A 192 LVDGAQSAGSLPLD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDC-L-GEINPTYVGWRSITYGAKGEPTGWA 263 (390)
T ss_dssp EEECTTTBTTBCCC-----TTT-SCCSEEEEESSSTTCCCTTCEEEEECTTT-G-GGCCCCSCCTTTEEECTTSCEEEEC
T ss_pred EEEcccccCCcCCC-----hhh-cCCCEEEccccccccCCCceEEEEECHHh-H-hhcCCccccCCcccccccCcccccc
Confidence 99999975433221 111 26899999999999999999999987532 2 222211 000000000000000000
Q ss_pred C--cccc-CCCC-CCchHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc---c-----ceEEEeecCCCccc
Q 048643 362 D--WQIT-LSRR-FRSLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS---P-----SAVMDKLKPKYENC 428 (506)
Q Consensus 362 ~--~~~~-~sr~-~~al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~---p-----~~v~f~~~~~~~~~ 428 (506)
+ ..+. ++.. .....+..+++.+...+ ++++.++..++++++.+.|++.++++ | ++++|++.+..
T Consensus 264 ~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 340 (390)
T 1elu_A 264 EGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL--- 340 (390)
T ss_dssp SGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS---
T ss_pred cchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCC---
Confidence 0 0111 1111 11133455666654445 88899999999999999999887765 2 67788764210
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
...++.+.|.+.|+. +.+.. +..++|+++ +..+++++++++++.|+++
T Consensus 341 --------------~~~~~~~~l~~~gi~-v~~~~--~~~~iRis~-~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 341 --------------GHRAIVQKLEEQRIY-LRTIA--DPDCIRACC-HYITDEEEINHLLARLADF 388 (390)
T ss_dssp --------------CHHHHHHHHHHTTEE-CEEET--TTTEEEEEC-CTTCCHHHHHHHHHHHTTC
T ss_pred --------------CHHHHHHHHHHCCEE-EEecC--CCCeEEEec-ccCCCHHHHHHHHHHHHhh
Confidence 024566777777764 44332 346899998 4667888999999998764
No 45
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=7.5e-24 Score=217.52 Aligned_cols=306 Identities=11% Similarity=0.032 Sum_probs=205.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
|..++.......++.+++++++|.+.+ ..++|+|+|+++..++.+.... .+ ++..|+++..+|.+
T Consensus 61 ~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al~~~~~~l~~~-~~-------~gd~vi~~~~~~~~ 125 (406)
T 3cai_A 61 HPSARRSAAVLDAAREAVADLVNADPG-------GVVLGADRAVLLSLLAEASSSR-AG-------LGYEVIVSRLDDEA 125 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHHHHHHHHHTGGG-GB-------TTCEEEEETTSCGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCChHHHHHHHHHHHhhc-cC-------CCCEEEEcCCccHH
Confidence 333334566777888999999998754 6899999998887665543100 00 45678888899988
Q ss_pred HHHHHHH----hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC
Q 048643 204 LQKAAQI----VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG 279 (506)
Q Consensus 204 ~~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g 279 (506)
+...+.. .|. +++.+|++++ ++.+|+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++|
T Consensus 126 ~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 195 (406)
T 3cai_A 126 NIAPWLRAAHRYGA---KVKWAEVDIE-TGELPTWQWESLISKS------TRLVAVNSASGTLGGVTDLRAMTKLVHDVG 195 (406)
T ss_dssp GTHHHHHHHHHHBC---EEEEECCCTT-TCCCCGGGHHHHCCTT------EEEEEEESBCTTTCBBCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCC---eEEEEecCcc-cCCcCHHHHHHHhCCC------ceEEEEeCCcCCccccCCHHHHHHHHHHcC
Confidence 7665544 688 9999998732 5789999999998643 458889999999999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcce-EEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCC-CLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g-~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
+++|+|++|+.+....+ .... ++|.++.++||+++ |. +| ++++++ .. ...+.....+....
T Consensus 196 ~~li~D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~~g-~~-~G~~~~~~~-~~-~~~l~~~~~~~~~~-------- 257 (406)
T 3cai_A 196 ALVVVDHSAAAPYRLLD-IRET-----DADVVTVNAHAWGG-PP-IGAMVFRDP-SV-MNSFGSVSTNPYAT-------- 257 (406)
T ss_dssp CEEEEECTTTTTTCCCC-HHHH-----CCSEEEEEGGGGTS-CS-CEEEEESCH-HH-HHTSCCCCSCTTCC--------
T ss_pred CEEEEEcccccCCCCCC-chhc-----CCCEEEeehhhhcC-CC-cCeEEEEeh-HH-HhhcCCcccCCCCC--------
Confidence 99999999986544332 1211 58999999999876 65 88 777764 22 22232111011000
Q ss_pred CCCCcccc-CCCCCCc-hHHHHHHHHhchh--------------HHHHHHHHHHHHHHHHHHHHHcCCCCc---c-----
Q 048643 359 DYKDWQIT-LSRRFRS-LKLWLVIRNYGVA--------------NLRHFLRSHVNMAKLFERLVASDKRVS---P----- 414 (506)
Q Consensus 359 ~~~~~~~~-~sr~~~a-l~~~~~l~~~G~~--------------g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----- 414 (506)
....+. ++....+ ..+..+++.+... +++++.++..++++++.+.|++.|+++ |
T Consensus 258 --~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 335 (406)
T 3cai_A 258 --GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQI 335 (406)
T ss_dssp --GGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBC
T ss_pred --ccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccC
Confidence 000111 1111111 1233344443221 478888999999999999999988876 2
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-------E---CCEEEEEEEecCCCCCHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-------C---GGIYAMRFAVGATLTEERHV 484 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------~---~g~~~lR~~~~~~~tt~edi 484 (506)
++++|++.+.. ..++.+.|.+.|+. +.+.. . .+..++|+++. ..++++||
T Consensus 336 ~~~~~~~~~~~------------------~~~~~~~L~~~gi~-v~~g~~~~~~~~~g~~~~~~~iRis~~-~~~t~e~i 395 (406)
T 3cai_A 336 PVVSFAVHKVP------------------ADRVVQRLADNGIL-AIANTGSRVLDVLGVNDVGGAVTVGLA-HYSTMAEV 395 (406)
T ss_dssp SEEEEEETTBC------------------HHHHHHHHHHTTEE-CEECCSCHHHHHHTTTTTTCCEEEECC-TTCCHHHH
T ss_pred CEEEEEECCcC------------------HHHHHHHHHHCCcE-EecCChHHHHHHcCCCCCCCeEEEEee-cCCCHHHH
Confidence 46777764320 24566667677764 44322 1 12468999994 56788899
Q ss_pred HHHHHHHHHH
Q 048643 485 MVAWTMVQEQ 494 (506)
Q Consensus 485 ~~li~~l~~~ 494 (506)
+++++.|+++
T Consensus 396 ~~~~~~l~~~ 405 (406)
T 3cai_A 396 DQLVRALASL 405 (406)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 46
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.92 E-value=3.5e-24 Score=215.61 Aligned_cols=296 Identities=15% Similarity=0.098 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH--H
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA--A 208 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka--~ 208 (506)
..++.++.+|+++++| ++. ..++++|||+|+..++.+++. ++..|+++...|++..++ +
T Consensus 42 ~~~~~~l~~~la~~~g-~~~-------~v~~~~~gt~a~~~al~~~~~-----------~gd~vi~~~~~~~~~~~~~~~ 102 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RDV-------EVFLVPTGTAANALCLSAMTP-----------PWGNIYCHPASHINNDECGAP 102 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SCC-------EEEEESCHHHHHHHHHHTSCC-----------TTEEEEECTTSHHHHSSTTHH
T ss_pred chHHHHHHHHHHHHhC-CCC-------cEEEeCCccHHHHHHHHHhcC-----------CCCEEEEcCccchhhhhchHH
Confidence 4567778899999999 422 579999999999888877643 567888899999998877 7
Q ss_pred HHh--CCCCCCeEEEecCCCCCcccCHHHHHH-HHHHHH-hcCCccEEEEEeccCCCCCc---ccChhHHHHHHHHhCCE
Q 048643 209 QIV--GIDLKNFRAIKTTKSSSYGLSPDSLLT-QINLDV-EAGLVPLFLCATIGTTAITA---VDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 209 ~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~-~i~~~~-~~g~~p~~Vv~t~gtt~tG~---idpl~~I~~ia~~~g~~ 281 (506)
..+ |. +++.+|.+ ++.+|+++|++ ++++.. ..+..+.+|+++.++ ++|. .+++++|+++|++||+|
T Consensus 103 ~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~~~~l~~i~~~~~~~~~~ 175 (356)
T 1v72_A 103 EFFSNGA---KLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYTLDEIEAIGDVCKSSSLG 175 (356)
T ss_dssp HHHTTSC---EEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhCCc---EEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCCHHHHHHHHHHHHHcCCe
Confidence 777 88 89988875 46899999999 886421 122346678888765 5999 67899999999999999
Q ss_pred EEeecccccccccCccchhhhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
+|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++.+ ++... .+. ++.... +
T Consensus 176 li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~-~~~~~-~~~----~~~~~~----~---- 240 (356)
T 1v72_A 176 LHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFN-TSLAT-EMS----YRRKRA----G---- 240 (356)
T ss_dssp EEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESS-GGGHH-HHH----HHHHHT----T----
T ss_pred EEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEEC-HHHHh-hHH----HHhhcc----C----
Confidence 999999975432111111111111 2689999999999 668888888774 33322 221 110000 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCccccccccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLV 434 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~ 434 (506)
.+ .....+.....++.+..+.+.+++++..++++++.+.|+++++++ | +++.+++.
T Consensus 241 ---~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~------------ 302 (356)
T 1v72_A 241 ---HL---SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD------------ 302 (356)
T ss_dssp ---CC---CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC------------
T ss_pred ---ch---hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC------------
Confidence 00 000112233345555555677788888999999999999887876 3 55555541
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 435 TEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.++.+.|.++|+.+ .+..+. ..++|+++ +..+++++++++++.|+++.++.
T Consensus 303 ----------~~~~~~l~~~gi~v-~~g~~~-~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 303 ----------SAMIDALLKAGFGF-YHDRWG-PNVVRFVT-SFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp ----------HHHHHHHHHTTCBC-BCSSSS-TTEEEEEC-CTTCCHHHHHHHHHHHHHTC---
T ss_pred ----------HHHHHHHHhcCeEE-eccccC-CCeEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence 14566676778743 322222 56899997 57788999999999999876553
No 47
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.92 E-value=1.1e-22 Score=210.76 Aligned_cols=298 Identities=14% Similarity=0.049 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.+++++++|.+ ..+++++|++||..++.+... ++..|+++...|.++..+++.
T Consensus 108 ~~~~~~l~~~la~~~g~~---------~~i~~~sGs~a~~~al~~l~~-----------~gd~vl~~~~~h~~~~~~~~~ 167 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT---------GAIVFSTGYMANLGIISTLAG-----------KGEYVILDADSHASIYDGCQQ 167 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHSC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCC---------ceEEecCcHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 355666677888888875 347777888899887766422 556788899999999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|. +++.+| .+|+++|+++|++... ..+.+|+++...+++|.+.|+++|+++|++||+|+++|++|++
T Consensus 168 ~g~---~~~~~~-------~~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~ 235 (427)
T 2w8t_A 168 GNA---EIVRFR-------HNSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSM 235 (427)
T ss_dssp SCS---EEEEEC-------TTCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---eeEEeC-------CCCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc
Confidence 998 888776 3689999999975311 1356888888899999999999999999999999999999987
Q ss_pred ccccCccchhhh--cCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCCCccCCCCcccc
Q 048643 291 SACICPEFQHFI--DGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 291 ~~~~~~~~~~~~--~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
+.... ..+... .++ .++|.+..++||+++.| + |+++.++ +.. +.+... .+|...
T Consensus 236 ~~~~~-~g~~~~~~~~~~~~~di~~~s~sK~~g~~-g-G~v~~~~-~l~-~~l~~~~~~~~~~----------------- 293 (427)
T 2w8t_A 236 GFFGP-NGRGVYEAQGLEGQIDFVVGTFSKSVGTV-G-GFVVSNH-PKF-EAVRLACRPYIFT----------------- 293 (427)
T ss_dssp TTSST-TSCCHHHHTTCTTCCSEEEEESSSTTCSC-C-EEEEECC-TTG-GGGGGTCHHHHSS-----------------
T ss_pred cccCC-CCCchHhhcCCCcCCcEEEecchhhhccC-C-CEEEeCH-HHH-HHHHHhccccccc-----------------
Confidence 65531 111111 122 36899999999999843 3 7777754 222 233211 122211
Q ss_pred CCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeecCCCcccccccccchHH
Q 048643 367 LSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLKPKYENCHSQQLVTEEE 438 (506)
Q Consensus 367 ~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~~~~~~~~~~~~~~~~~ 438 (506)
++-. .....+..+++.+. .+.++.++..++++++.+.|++. +++ + +++++++..
T Consensus 294 ~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--------------- 355 (427)
T 2w8t_A 294 ASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED--------------- 355 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS---------------
T ss_pred CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC---------------
Confidence 1111 11122234454432 24678888999999999999876 554 2 566666632
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 048643 439 AINEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTTNTP 504 (506)
Q Consensus 439 ~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~~~~ 504 (506)
.....++.+.|.++|+ ++.+... .+..++|+++. ..+++++|++++++|+++.+++....++
T Consensus 356 --~~~~~~l~~~L~~~Gi-~v~~~~~~~~~~~~~~lRi~~~-~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 421 (427)
T 2w8t_A 356 --QEQAAMMWQALLDGGL-YVNMARPPATPAGTFLLRCSIC-AEHTPAQIQTVLGMFQAAGRAVGVIGLE 421 (427)
T ss_dssp --HHHHHHHHHHHHHTTE-ECEEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHTCC---
T ss_pred --HHHHHHHHHHHHHCCe-EEeeeCCCCCCCCCeEEEEEeC-CCCCHHHHHHHHHHHHHHHHHhCccccc
Confidence 1234567788888876 4444322 34578999985 5568889999999999999888766543
No 48
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.91 E-value=3.3e-23 Score=213.05 Aligned_cols=324 Identities=11% Similarity=0.074 Sum_probs=217.7
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|...+...++++.+.+|+.+.+|++.+. ...++|+||++|+..++.++..
T Consensus 59 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~---------- 123 (406)
T 1xi9_A 59 MKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD---------- 123 (406)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCChHHHHHHHHHHhCC----------
Confidence 3344443443322345555567899999999999998875432 3789999999999888776532
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP- 267 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp- 267 (506)
++..|+++..+|.++..+++..|. +++.+|.++++++.+|+++|++++++. +.+|+++.++|++|.+-|
T Consensus 124 -~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~ 193 (406)
T 1xi9_A 124 -PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYDK 193 (406)
T ss_dssp -TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred -CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcCH
Confidence 556788889999999999999999 999999875334689999999998653 446777889999999855
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC-CCC-CeeEEcCccccCCC-CcceEEEE-eCch---hHHh
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV-EGA-DSFSLNAHKWFFTT-LDCCCLWV-KDPS---ALVS 338 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi-~~a-Dsi~~~~hK~l~~p-~~~g~~~~-r~~~---~l~~ 338 (506)
+++|+++|++||+|+++|++|+++.. ...... +..+ ... |.++.++||+++.| +.+|++++ .++. .+.+
T Consensus 194 ~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~ 271 (406)
T 1xi9_A 194 KTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHIS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVRE 271 (406)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCC-HHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCC-HHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHH
Confidence 99999999999999999999987654 211111 1111 244 66788999999733 45888883 2330 2222
Q ss_pred hhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 339 SLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
.+.....+. .+ ...+..+++...+ +.++++++.++..++++++.+.|++.|+++
T Consensus 272 ~l~~~~~~~-------------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 330 (406)
T 1xi9_A 272 AIDRLARIR-------------------LC--PNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTK 330 (406)
T ss_dssp HHHHHHHHT-------------------CC--SCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCC
T ss_pred HHHHHHHhh-------------------cC--CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeec
Confidence 332110010 00 0122233333333 455688888999999999999999988876
Q ss_pred c--ceEEE-eecCC-CcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHH
Q 048643 414 P--SAVMD-KLKPK-YENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 414 p--~~v~f-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~ 486 (506)
| +.++| ++... + ....++.+.+. +.|+.+.....+. +..++|+++. +++++|++
T Consensus 331 ~~~~~~~~~~~~~~~~----------------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~---~~~~~i~~ 391 (406)
T 1xi9_A 331 PQGAFYIFPKIEVGPW----------------KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEE 391 (406)
T ss_dssp CCBSSEECCEECSCSC----------------SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHH
T ss_pred CCeeEEEEEecCccCC----------------CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec---CCHHHHHH
Confidence 3 44444 44320 0 00245666665 6676443332221 2568999984 68889999
Q ss_pred HHHHHHHHHHHHH
Q 048643 487 AWTMVQEQLEAFL 499 (506)
Q Consensus 487 li~~l~~~~~~l~ 499 (506)
+++.|.++.+++.
T Consensus 392 ~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 392 AMDRFEKFMKERL 404 (406)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887653
No 49
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.91 E-value=2.1e-22 Score=205.94 Aligned_cols=295 Identities=10% Similarity=0.041 Sum_probs=208.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.+++++++|.+. .+++++||+++..++.+... ++..|+++...|.++..+++.
T Consensus 87 ~~~~~~l~~~la~~~~~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~ 146 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD---------TILYSSCFDANGGLFETLLG-----------PEDAIISDELNHASIIDGIRL 146 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHCCCc---------EEEECchHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 3455566678888888753 46666678898877765432 567888999999999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|. +++.+|. +|+++|++++++....|..+.+|+.+.++|++|.+.|+++|+++|++||+|+|+|++|+.
T Consensus 147 ~g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~ 216 (399)
T 3tqx_A 147 CKA---QRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAV 216 (399)
T ss_dssp CCS---EEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---ceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 999 8888874 477899999988765555678899999999999999999999999999999999999964
Q ss_pred ccccCcc-chhhhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccC
Q 048643 291 SACICPE-FQHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 291 ~~~~~~~-~~~~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
++...+. ......++ ...|.++.++||+++.+.+ |+++.++ ... +.+.. ...|... .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~-~~~~~~~~~~~~~-----------------~ 276 (399)
T 3tqx_A 217 GFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHK-EII-EWLRNRSRPYLFS-----------------N 276 (399)
T ss_dssp TTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECH-HHH-HHHHHHCHHHHSS-----------------C
T ss_pred cccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCH-HHH-HHHHHhCcceecc-----------------C
Confidence 3322111 00111222 4679999999999995544 7766543 332 22221 1222211 0
Q ss_pred CCCCCch---HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHH
Q 048643 368 SRRFRSL---KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEA 439 (506)
Q Consensus 368 sr~~~al---~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~ 439 (506)
....+ .+..+++... ++.+++.++..++++++.+.|++. +++ | +++.+.+...
T Consensus 277 --~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--------------- 337 (399)
T 3tqx_A 277 --TVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLVPGNHPIIPVMLGDA--------------- 337 (399)
T ss_dssp --CCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSSEEEEEEECH---------------
T ss_pred --CCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEEEeCCH---------------
Confidence 11222 3333444332 567888999999999999999987 666 3 7777766431
Q ss_pred HHHHHHHHHHHHHhcCcEEEeeee----ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 440 INEFNRELLESINASGKAYMTHAV----CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 440 ~~~~~~~l~~~l~~~g~~~~~~~~----~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
....++.++|.++|+. +.+.. ..+..++|+++. ..+++++|+++++.|+++.+++
T Consensus 338 --~~~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 338 --QLATNMADHLLQEGIY-VVGFSYPVVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp --HHHHHHHHHHHHTTEE-CCEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHCCCE-EeeeCCCCCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHHh
Confidence 2346777888888864 44432 235679999984 5678889999999999998765
No 50
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=6.2e-24 Score=215.18 Aligned_cols=295 Identities=14% Similarity=0.113 Sum_probs=205.1
Q ss_pred HHHHHHHHHH-HHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 131 TELENIVMDW-LGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~-la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
.....++.++ +++++|.+ ..++++|||+|+..++.++.. ++..|+++..+|++...+++
T Consensus 52 ~~~~~~l~~~~la~~~~~~---------~v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~ 111 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD---------VARVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAAE 111 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---------EEEEeCChHHHHHHHHHHHhC-----------CCCEEEEccCcchHHHHHHH
Confidence 3445566788 89999876 368999999999888877632 56678899999999999999
Q ss_pred HhCCCCCCeEEEe--cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 210 IVGIDLKNFRAIK--TTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 210 ~~G~g~~~v~~v~--~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
..|+ +++.+| .++ ++.+|+++|++++++.... ..+.+|+++.++|++|.+.|+++|+++|++||+|+|+|++
T Consensus 112 ~~g~---~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a 185 (371)
T 2e7j_A 112 RAGL---NIALVPKTDYP--DYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGA 185 (371)
T ss_dssp HTTC---EEEEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECT
T ss_pred HcCC---eEEEeecccCC--CCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECc
Confidence 9999 999999 764 4799999999999864321 2466899999999999999999999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhh-hcCCc-cccCCccccCCCccCCCCccc
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSS-LSTNP-EYLKNKATESKQVVDYKDWQI 365 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~-~~~~~-~yl~~~~~~~~~~~~~~~~~~ 365 (506)
|+.+....+ .... .+|.++.++||+++.|.++|++++++.. . +. +.... .+... ...
T Consensus 186 ~~~~~~~~~-~~~~-----~~di~~~s~sK~~~~~~~~G~~~~~~~~-~-~~~~~~~~~~~~~~-------------~~~ 244 (371)
T 2e7j_A 186 YAIGRMPVS-LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEW-A-EIVLRRSEKYKNKE-------------VEL 244 (371)
T ss_dssp TTBTTBCCC-HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTT-T-TTTTCBCSSCTTSB-------------GGG
T ss_pred cccCCCCCC-hhhc-----CCCEEEecCCcCCCCCCCcEEEEEechh-h-hhhccccccCcccc-------------ccc
Confidence 987654322 1111 5789999999999999999999997642 1 22 21110 11110 000
Q ss_pred -cCCCCCC-chHHHHHHHHhchhHHHHHHHHH--HHHHHHHHHHHHcCCCCc---c-----ceEEEeecCCCcccccccc
Q 048643 366 -TLSRRFR-SLKLWLVIRNYGVANLRHFLRSH--VNMAKLFERLVASDKRVS---P-----SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 366 -~~sr~~~-al~~~~~l~~~G~~g~~~~i~~~--~~~a~~l~~~l~~~~~~~---p-----~~v~f~~~~~~~~~~~~~~ 433 (506)
.++.... ...+..+++.+.. ++.++. .++++++.+.|++. +++ | ++++|++. .
T Consensus 245 ~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~--------- 309 (371)
T 2e7j_A 245 LGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE-V--------- 309 (371)
T ss_dssp TTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH-H---------
T ss_pred ccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC-C---------
Confidence 0111111 1222334443322 556667 78999999999887 766 2 45555542 1
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-C---C--EEEEE-EEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTHAVC-G---G--IYAMR-FAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~---g--~~~lR-~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..++.+.|.+.|+. +.+... . | ..++| +++....+++++|+++++.|+++.+++
T Consensus 310 ----------~~~~~~~l~~~gi~-~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 310 ----------LYEISKKAKGGRFF-LYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp ----------HHHHHHHSSSGGGH-HHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ----------HHHHHHHHHHCCEE-EEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 24566666666663 222100 0 2 46799 998533278889999999999987653
No 51
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.91 E-value=6.2e-23 Score=209.51 Aligned_cols=323 Identities=12% Similarity=0.049 Sum_probs=217.8
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCc-EEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGG-GVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~-g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+...++.....|...+...++++.+.+|+.+.+|.+.+. .. .++|+||++++..++.++..
T Consensus 43 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~-------- 109 (389)
T 1gd9_A 43 HIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP-----KTEIMVLLGANQAFLMGLSAFLK-------- 109 (389)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEESSTTHHHHHHHTTTCC--------
T ss_pred HHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----CCeEEEcCChHHHHHHHHHHhCC--------
Confidence 34444444443333345544567899999999999998964321 26 89999999999887766532
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|.++..+++..|. +++.+|.++++++.+|+++|+++++++ +.+|+++.++|++|.+-
T Consensus 110 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~ 177 (389)
T 1gd9_A 110 ---DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAVL 177 (389)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCC
Confidence 456788888999999999999999 999999875334689999999998642 44677788999999986
Q ss_pred ---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 ---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 ---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
++++|+++|++||+|+++|++|+++.......... +.+....|.+..++||+++.| ..+|++++++ .. .+.+
T Consensus 178 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~-~~~l 255 (389)
T 1gd9_A 178 TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS-WI-IERM 255 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH-HH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH-HH-HHHH
Confidence 59999999999999999999998765421101111 122345788999999999744 4578888763 22 2233
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chh--HHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVA--NLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~--g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
.....+.. .+ ...+..+++...+ +.+ +++++.++..++++++.+.|++. +++
T Consensus 256 ~~~~~~~~------------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 314 (389)
T 1gd9_A 256 VKFQMYNA------------------TC--PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVK 314 (389)
T ss_dssp HHHHTTTT------------------CS--CCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCC
T ss_pred HHHHhhhc------------------cC--CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeecC
Confidence 21100100 00 1122223333333 234 67888889999999999999987 676
Q ss_pred c--c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHH
Q 048643 414 P--S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 414 p--~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~l 487 (506)
| + .+++++.+.+ ....++.+.|. +.|+....+..+ .+..++|+++.. ++++|+++
T Consensus 315 ~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~---~~~~i~~~ 375 (389)
T 1gd9_A 315 PKGAFYIFPRIRDTG----------------LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT---AYEKLEEA 375 (389)
T ss_dssp CCBTTEECCBCGGGT----------------CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS---CHHHHHHH
T ss_pred CCeeeEEEEeccCCC----------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHH
Confidence 3 3 3444553200 01245667776 667643333222 135689999863 78899999
Q ss_pred HHHHHHHHHH
Q 048643 488 WTMVQEQLEA 497 (506)
Q Consensus 488 i~~l~~~~~~ 497 (506)
++.|.++.++
T Consensus 376 l~~l~~~~~~ 385 (389)
T 1gd9_A 376 MDRMERVLKE 385 (389)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 52
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.91 E-value=1.3e-22 Score=208.99 Aligned_cols=307 Identities=14% Similarity=0.132 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH--
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ-- 209 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~-- 209 (506)
....++.+++++++|.+.+ ..++|+||++++..++.+++..... +.. ++.+|+++...|.++..++.
T Consensus 71 ~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al~~al~~~~~~~~~--~~~--gd~vii~~~~~~~~~~~~~~~~ 139 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDG-------EVVVTDTTSINLFKVLSAALRVQAT--RSP--ERRVIVTETSNFPTDLYIAEGL 139 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTT-------SEEECSCHHHHHHHHHHHHHHHHHH--HST--TCCEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcc-------cEEEeCChhHHHHHHHHhhcccccc--cCC--CCcEEEEcCCCCCchHHHHHHH
Confidence 4556678999999998654 6788999998887777766521100 001 23367778889998766543
Q ss_pred --Hh--CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 210 --IV--GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 210 --~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
.. |. +++.||. +++|+++|++ .+.+|+++.++|++|.+.|+++|+++|++||+|+|+|
T Consensus 140 ~~~~~~g~---~~~~v~~---------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 201 (416)
T 1qz9_A 140 ADMLQQGY---TLRLVDS---------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWD 201 (416)
T ss_dssp HHHHCSSC---EEEEESS---------GGGHHHHCST------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHhcCCc---eEEEeCc---------HHHHHHHhCC------CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEE
Confidence 34 88 8888874 5678877754 2558999999999999999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcc-eEEEEeCchhHHhhhcC-CccccCCcc-ccCCCccCCC-
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDC-CCLWVKDPSALVSSLST-NPEYLKNKA-TESKQVVDYK- 361 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~-~~~yl~~~~-~~~~~~~~~~- 361 (506)
++|+.+....+ .... ++|.++.++||+++.+.++ |++++++... +.+.. ...|..... .+....+.+.
T Consensus 202 ~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~--~~l~~~~~g~~g~~~~~~~~~~~~~~~ 273 (416)
T 1qz9_A 202 LAHSAGAVPVD-LHQA-----GADYAIGCTYKYLNGGPGSQAFVWVSPQLC--DLVPQPLSGWFGHSRQFAMEPRYEPSN 273 (416)
T ss_dssp CTTTTTTSCCC-HHHH-----TCSEEEECSSSTTCCCTTCCCEEEECTTTT--TTSCCSCCCGGGBCTTSCCCSSCCBCS
T ss_pred ccccccCcCCC-hhhc-----CCCEEEecCcccCCCCCCCeEEEEECHHHH--hccCCCccccCccccccCCCCccCCCc
Confidence 99985543322 1111 5899999999999877888 9998876421 12211 111111000 0000000000
Q ss_pred -CccccC-CCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC-C--CCc---c-------ceEEEeecCCC
Q 048643 362 -DWQITL-SRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD-K--RVS---P-------SAVMDKLKPKY 425 (506)
Q Consensus 362 -~~~~~~-sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~-~--~~~---p-------~~v~f~~~~~~ 425 (506)
...... +.. .....+..+++.+..++++++.++..++++++.+.|++. | +++ | ++++|++..
T Consensus 274 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 351 (416)
T 1qz9_A 274 GIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE-- 351 (416)
T ss_dssp SGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT--
T ss_pred chHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC--
Confidence 001111 111 112345567777666789999999999999999999885 5 665 2 445555421
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
..++.+.|.++|+. +. ..+..++|+++.++.++++||+++++.|+++.++..
T Consensus 352 ------------------~~~l~~~l~~~gi~-~~---~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 352 ------------------GYAVIQALIDRGVI-GD---YREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp ------------------HHHHHHHHHTTTEE-CE---EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ------------------HHHHHHHHHhCCcE-ec---cCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 24567777777863 32 224568999986457899999999999999887654
No 53
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=5.1e-23 Score=211.93 Aligned_cols=319 Identities=13% Similarity=0.102 Sum_probs=221.5
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+ ..+......|...+...++++.+.+|+.+.+|++.+. ...++|+|||+|+..++.++..
T Consensus 61 v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~---------- 124 (409)
T 2gb3_A 61 FFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN---------- 124 (409)
T ss_dssp HHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC----------
T ss_pred HHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCHHHHHHHHHHHhCC----------
Confidence 44445 5554433455555567899999999999988865432 3789999999999888876532
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--- 265 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--- 265 (506)
++..|+++..+|.++..+++..|. +++.+|.++++++.+ +++|++++++. +.+|+++.++|++|.+
T Consensus 125 -~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~ 193 (409)
T 2gb3_A 125 -PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVYGK 193 (409)
T ss_dssp -TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred -CCCEEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCcCH
Confidence 556788888999999999999999 999999875334555 88888887542 4477888899999998
Q ss_pred cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc
Q 048643 266 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP 344 (506)
Q Consensus 266 dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~ 344 (506)
+++++|+++|++||+|+++|++|+++..-. .....+.++...|.++.++||+++.| +.+|+++++++... +.+....
T Consensus 194 ~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~-~~l~~~~ 271 (409)
T 2gb3_A 194 DEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELI-SHAMKLA 271 (409)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHH-HHHHHHH
Confidence 458999999999999999999998754321 11122334446789999999999744 45899888773332 2221100
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ce
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS----P--SA 416 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~ 416 (506)
.+. + ....+..+++...+ +.++++++.++..++++++.+.|++. +++ | +.
T Consensus 272 ~~~----------------~-----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 329 (409)
T 2gb3_A 272 QGR----------------L-----APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGAF 329 (409)
T ss_dssp HHS----------------C-----CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSS
T ss_pred hcc----------------C-----CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeE
Confidence 000 0 11223333333333 56778888899999999999999886 554 3 33
Q ss_pred EEE-eecCCCcccccccccchHHHHHHHHHHHHHHHHhc------CcEEEeee-eE-----CCEEEEEEEecCCCCCHHH
Q 048643 417 VMD-KLKPKYENCHSQQLVTEEEAINEFNRELLESINAS------GKAYMTHA-VC-----GGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 417 v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~-~~-----~g~~~lR~~~~~~~tt~ed 483 (506)
+.| ++.+. ...++.+.|.++ |+. +.+. .+ .+..++|+++. +++++
T Consensus 330 ~~~~~~~~~------------------~~~~l~~~l~~~~~~~~~gi~-v~~g~~f~~~~~~~~~~iRis~~---~~~e~ 387 (409)
T 2gb3_A 330 YITAELPVE------------------DAEEFARWMLTDFNMDGETTM-VAPLRGFYLTPGLGKKEIRIACV---LEKDL 387 (409)
T ss_dssp EEEEECSSS------------------CHHHHHHHHHHSCCBTTEEEE-CEEGGGGCSSTTTTSSEEEEECC---SCHHH
T ss_pred EEEEEeCCC------------------CHHHHHHHHHhccccccCcEE-EeCchHhCCCCCCCCCEEEEEeC---CCHHH
Confidence 333 54311 024566777766 654 4433 22 23578999985 68889
Q ss_pred HHHHHHHHHHHHHHHHc
Q 048643 484 VMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 484 i~~li~~l~~~~~~l~~ 500 (506)
|+++++.|+++.+++..
T Consensus 388 i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 388 LSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999887753
No 54
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.91 E-value=1.2e-22 Score=210.31 Aligned_cols=350 Identities=12% Similarity=0.139 Sum_probs=220.6
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcCC----CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFNV----VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 168 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a 168 (506)
..|+++-..+..++.++ +.+...+.. ....|..++.......++.+++++++|.+.+ ..++|+|||+|
T Consensus 19 ~~~Ld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a 90 (432)
T 3a9z_A 19 KVYMDYNATTPLEPEVI-QAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-------DIIFTSGGTES 90 (432)
T ss_dssp CEECBTTTCCCCCHHHH-HHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHH
T ss_pred cEEeeCCccCCCCHHHH-HHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEeCChHHH
Confidence 45666554444444443 333332211 1223444455677888999999999998654 78999999999
Q ss_pred HHHHHHHHHHHHHH---hhccc------CC-CCeEEEeCCCCchHHHHHHHH----hCCCCCCeEEEecCCCCCcccCHH
Q 048643 169 ILCTLTAARDRVLN---KIGRE------NI-SKLVVYGSDQTHCALQKAAQI----VGIDLKNFRAIKTTKSSSYGLSPD 234 (506)
Q Consensus 169 ~l~al~~ar~~~~~---~~~~~------~~-~~~~v~~s~~~H~s~~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~ 234 (506)
+..++.++...+.. +.|.+ +. ....|+++...|.|+.++... .|. +++.||+++. ++.+|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~ 166 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPVSKV-NGQVEVE 166 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECCCTT-TSSCCHH
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEecCcc-cCCcCHH
Confidence 99988887532211 11110 00 124788899999998776543 577 8999998752 4689999
Q ss_pred HHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC----------CEEEeecccccccccCccchhhhcC
Q 048643 235 SLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG----------IWVHVDAAYAGSACICPEFQHFIDG 304 (506)
Q Consensus 235 ~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g----------~~lhVDaA~gg~~~~~~~~~~~~~g 304 (506)
+|++++++. +.+|+++.++|++|.+.|+++|+++|+++| +|+|+|++|+.+....+ ....
T Consensus 167 ~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~~--- 236 (432)
T 3a9z_A 167 DILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VEDL--- 236 (432)
T ss_dssp HHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHHH---
T ss_pred HHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhhc---
Confidence 999988643 458899999999999999999999999999 99999999976543221 1111
Q ss_pred CCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCC-CchHHHHHHHHh
Q 048643 305 VEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWLVIRNY 383 (506)
Q Consensus 305 i~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~ 383 (506)
.+|.++.++|||++ |. +|++++++.... . ...+.|.... . ...+. .++... ....+..+++.+
T Consensus 237 --~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~-~--~~~~~~~~~~-~----~~~~~----~~~~~~~~~~a~~aal~~~ 300 (432)
T 3a9z_A 237 --GVDFLTIVGHKFYG-PR-IGALYVRGVGKL-T--PLYPMLFGGG-Q----ERNFR----PGTENTPMIAGLGKAADLV 300 (432)
T ss_dssp --CCSEEEEEGGGTTC-CS-CEEEEETTBTTT-B--CCCCSCCSSC-G----GGGTS----CSCCCHHHHHHHHHHHHHH
T ss_pred --CCCEEEEehhHhcC-Cc-ceEEEEcccccc-C--CcCceeecCC-c----ccccc----CCCcCHHHHHHHHHHHHHH
Confidence 68999999999975 66 999999865311 1 1111121110 0 00000 011111 112333344443
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCc-------------cceEEEeecCCCcccccccccchHHHHHHHHHHHHHH
Q 048643 384 GVANLRHFLRSHVNMAKLFERLVASDKRVS-------------PSAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLES 450 (506)
Q Consensus 384 G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-------------p~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 450 (506)
.++++++.++..++++++.+.|+++++++ |.+++|.+..... + ...+.+.
T Consensus 301 -~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------~~~~~~~ 363 (432)
T 3a9z_A 301 -SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL---------R-------GYMVLAQ 363 (432)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC---------C-------HHHHHHH
T ss_pred -HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC---------c-------HHHHHHH
Confidence 35788899999999999999998754432 2478888754210 0 1223332
Q ss_pred HH----hcCcEEEeeee---------ECC------EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 451 IN----ASGKAYMTHAV---------CGG------IYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 451 l~----~~g~~~~~~~~---------~~g------~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
+. +.|..+ .+.. ..| ..++|+++. ..++++|++++++.|+++.+++.
T Consensus 364 l~~i~~~~G~~~-~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 364 CQTLLASVGASC-HSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp CSSEECBSSCGG-GGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCeEEeccccc-cCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence 21 112111 0000 001 258999995 66788899999999999987764
No 55
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=9.6e-23 Score=208.43 Aligned_cols=317 Identities=11% Similarity=0.049 Sum_probs=217.8
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+......|...+...++++.+.+|+.+.+|++.+. ...++|+||++++..++.++..
T Consensus 57 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~v~~~~g~t~al~~~~~~l~~-------- 123 (389)
T 1o4s_A 57 EPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-----DQVVVTNGAKQALFNAFMALLD-------- 123 (389)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEEecCHHHHHHHHHHHhCC--------
Confidence 334555555554433345555567899999999999988874221 2789999999999888776532
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|.++..+++..|. +++.+|.++++++.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 124 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 191 (389)
T 1o4s_A 124 ---PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVY 191 (389)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCC
Confidence 456788888999999999999999 999999875335789999999988643 34677788999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccC--ccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACIC--PEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~--~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
| +++|+++|++||+++++|++|+.+.... ..... +.+....|.++.++||+++.| ..+|++++++. +.+.+
T Consensus 192 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~--~~~~l 268 (389)
T 1o4s_A 192 RREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK--VATAV 268 (389)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH--HHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeCHH--HHHHH
Confidence 6 9999999999999999999998755321 11111 222346889999999999733 45888887542 22222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--c
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--S 415 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~ 415 (506)
.....+.. .....+..++++..+.. +++++.++..++++++.+.|++. +++ | +
T Consensus 269 ~~~~~~~~--------------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 326 (389)
T 1o4s_A 269 SKIQSHTT--------------------SCINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVEPEGA 326 (389)
T ss_dssp HHHHHHHT--------------------CSCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSBS
T ss_pred HHHhhhcc--------------------cCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeecCCcc
Confidence 11000000 00123444555555543 37788888999999999999987 676 3 3
Q ss_pred -eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 416 -AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 416 -~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+.+++... ..++.+.|. +.|+.......+....++|+++.+ ++++|+++++.|.+
T Consensus 327 ~~~~~~~~~~-------------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~---~~~~l~~~l~~l~~ 384 (389)
T 1o4s_A 327 FYLFFKVRGD-------------------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT---SIERLTEALDRIED 384 (389)
T ss_dssp SEEEEECSSC-------------------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS---CHHHHHHHHHHHHH
T ss_pred eEEEEeCCCC-------------------HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC---CHHHHHHHHHHHHH
Confidence 344454311 245666665 667644333223223489999863 78899999999887
Q ss_pred HH
Q 048643 494 QL 495 (506)
Q Consensus 494 ~~ 495 (506)
+.
T Consensus 385 ~l 386 (389)
T 1o4s_A 385 FL 386 (389)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 56
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.90 E-value=3.6e-23 Score=212.40 Aligned_cols=310 Identities=11% Similarity=0.087 Sum_probs=211.8
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|...+...++.+++.+|+++.+|.+.+. ....++|+||++|+..++.+... ++..|+++..+|.
T Consensus 73 ~y~~~~g~~~l~~~l~~~l~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~ 137 (407)
T 3nra_A 73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDA----RDGLIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDYF 137 (407)
T ss_dssp HSCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHTTCC-----------TTCEEEEEESCCT
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEcCCccc
Confidence 34455567889999999999999985310 01689999999999887765432 5567888999999
Q ss_pred HHHHHHHHhCCCCCCeEEEecCC----CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHH
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTK----SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVA 275 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~----~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia 275 (506)
++..+++..|. +++.+|.+. ++++.+|+++|++++++. +.+|+++.++|++|.+-| +++|+++|
T Consensus 138 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~ 208 (407)
T 3nra_A 138 ANRKLVEFFEG---EMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIGQIAALA 208 (407)
T ss_dssp HHHHHHHHTTC---EEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred chHHHHHHcCC---EEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHHHHHHHH
Confidence 99999999999 999999842 236799999999999763 336778889999999988 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhc---CCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCcc
Q 048643 276 KQFGIWVHVDAAYAGSACICPEFQHFID---GVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKA 351 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~~~~~~~~---gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 351 (506)
++||+|+++|++|+++..-......... .....+.+..+++|+++ ....+|+++.+ +... +.+.....+..
T Consensus 209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~l~~~~~~~~--- 283 (407)
T 3nra_A 209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-RAII-ARMEKLQAIVS--- 283 (407)
T ss_dssp HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHH-HHHHHHHHHHT---
T ss_pred HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC-HHHH-HHHHHHHhhhc---
Confidence 9999999999999875532211111100 11234577888999998 44677887764 3322 22211100000
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecC
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKP 423 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~ 423 (506)
. ....+..++....+ +.+.++++.++..++++++.+.|+++|+++ | ..+.+.+..
T Consensus 284 -------------~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 284 -------------L----RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPK 346 (407)
T ss_dssp -------------S----SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCC
T ss_pred -------------c----CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCC
Confidence 0 00112222222223 335678888999999999999999988887 3 334444432
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.. ....++.+.|.+ .|+. +.+.. + .+..++|++++. ++++|+++++.|+++.+++
T Consensus 347 ~~----------------~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~iRis~~~---~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 347 LA----------------VAPAEFVKILRLQAGVV-VTPGTEFSPHTADSVRLNFSQ---DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp BS----------------SCHHHHHHHHHHHHCEE-CEEGGGTCTTCTTBEEEECCS---CHHHHHHHHHHHHHHHHHH
T ss_pred CC----------------CCHHHHHHHHHHhCCEE-EeCchhhCCCCCCEEEEEeCC---CHHHHHHHHHHHHHHHHHh
Confidence 11 012455666654 4764 44432 2 246789999863 7889999999999988765
No 57
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.90 E-value=2.1e-22 Score=206.29 Aligned_cols=328 Identities=10% Similarity=0.021 Sum_probs=218.7
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+......|... ..++++.+.+|+++.+|.+... ...++|+||++|+..++.+...
T Consensus 48 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~--------- 111 (399)
T 1c7n_A 48 ELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK--------- 111 (399)
T ss_dssp HHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC---------
Confidence 34444444443222344333 7889999999999988854321 2789999999999888776532
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT-KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|.++..+++..|. +++.+|.+ .++++.+|+++|++++++. .+.+|+++.++|++|.+-
T Consensus 112 --~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~ 181 (399)
T 1c7n_A 112 --PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVW 181 (399)
T ss_dssp --TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCC
T ss_pred --CCCEEEEcCCCcHhHHHHHHHcCC---EEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCc
Confidence 456788899999999999999998 89999985 3234679999999998621 244677788999999998
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC----CCCCeeEEcCccccCCC-CcceEEEEeCchhHHh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV----EGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVS 338 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi----~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 338 (506)
| +++|+++|++||+++++|++|+++......... +..+ ...+.+..+++|+++.| ..+|++++++++...
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~- 259 (399)
T 1c7n_A 182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRE- 259 (399)
T ss_dssp CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHH-
Confidence 8 999999999999999999999875432111111 1111 13446678899999844 468999887654332
Q ss_pred hhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHc-CCCCc--
Q 048643 339 SLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVAS-DKRVS-- 413 (506)
Q Consensus 339 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~-- 413 (506)
.+.....+. +.. + ...+..+++...+ +.+.++++.++..++++++.+.|++ +|+++
T Consensus 260 ~l~~~~~~~----------------~~~-~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 320 (399)
T 1c7n_A 260 RFTKSRDAT----------------SGM-P--FTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320 (399)
T ss_dssp HHHHHHHHT----------------TCC-C--CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC
T ss_pred HHHHHHhhc----------------ccC-C--CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe
Confidence 221100000 000 0 1223333333333 3567888888899999999999998 78887
Q ss_pred -c--ceEE-EeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHH
Q 048643 414 -P--SAVM-DKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 414 -p--~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~ 486 (506)
| +++. +++...+ ....++.+.|. +.|+....+..+. +..++|+++.. .+++|++
T Consensus 321 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~l~~ 381 (399)
T 1c7n_A 321 LIEGTYLQWIDFRALK----------------MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA---PSSVIQE 381 (399)
T ss_dssp CCSBSSEEEEECGGGC----------------CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS---CHHHHHH
T ss_pred cCCceEEEEEEcccCC----------------CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc---CHHHHHH
Confidence 3 4443 5653210 01245677776 5687543332222 35689999964 3679999
Q ss_pred HHHHHHHHHHHHHcc
Q 048643 487 AWTMVQEQLEAFLTT 501 (506)
Q Consensus 487 li~~l~~~~~~l~~~ 501 (506)
+++.|.++.+++.+.
T Consensus 382 ~l~~l~~~l~~~~~~ 396 (399)
T 1c7n_A 382 SLERLNKALKDLKNR 396 (399)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998877543
No 58
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.90 E-value=2.5e-22 Score=204.85 Aligned_cols=320 Identities=11% Similarity=0.081 Sum_probs=216.0
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+......|.. ...++++++.+++++.+|.+.+. ...++|+||++++..++.+...
T Consensus 49 ~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~--------- 112 (391)
T 4dq6_A 49 CIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKS-----EWLIYSPGVIPAISLLINELTK--------- 112 (391)
T ss_dssp HHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcH-----HHeEEcCChHHHHHHHHHHhCC---------
Confidence 3444455555443334433 34789999999999999954221 2789999999999888776533
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT--KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|.++..+++..|. +++.+|.+ .++++.+|+++|++++++ +.+|+++.++|++|.+
T Consensus 113 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~nptG~~ 180 (391)
T 4dq6_A 113 --ANDKIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPVGRV 180 (391)
T ss_dssp --TTCEEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTTTBC
T ss_pred --CCCEEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCCCcC
Confidence 556788899999999999999999 99999987 445678999999999875 3478888899999999
Q ss_pred ---cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC----CCCCeeEEcCccccC-CCCcceEEEEeCchhHH
Q 048643 266 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV----EGADSFSLNAHKWFF-TTLDCCCLWVKDPSALV 337 (506)
Q Consensus 266 ---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi----~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~ 337 (506)
+++++|+++|++||+++++|++|+++..-...... +..+ .....+..++||+++ ....+|+++++++....
T Consensus 181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 259 (391)
T 4dq6_A 181 WTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYK 259 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHH
Confidence 78999999999999999999999775432111111 1111 022266778999997 44678888887644322
Q ss_pred hhhcCC-ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc--
Q 048643 338 SSLSTN-PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS-- 413 (506)
Q Consensus 338 ~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~-- 413 (506)
.+... ..+.. ..........+..++.. +.+.++++.++..++++++.+.|++ .|+++
T Consensus 260 -~~~~~~~~~~~-----------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 320 (391)
T 4dq6_A 260 -LLDDAFTRIDI-----------------KRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKVR 320 (391)
T ss_dssp -HHHHHHHHTTC-----------------CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC
T ss_pred -HHHHHHHhhcC-----------------CCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEec
Confidence 22110 00000 00000111222333332 3456788889999999999999988 68887
Q ss_pred -c--ceEE-EeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeee-eE--CCEEEEEEEecCCCCCHHHHH
Q 048643 414 -P--SAVM-DKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHA-VC--GGIYAMRFAVGATLTEERHVM 485 (506)
Q Consensus 414 -p--~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~--~g~~~lR~~~~~~~tt~edi~ 485 (506)
| +.+. +++...+ ....++.+.|.++ |+. +.+. .+ .+..++|++++ +++++|+
T Consensus 321 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~iRis~~---~~~~~i~ 380 (391)
T 4dq6_A 321 KPEGTYLLWVDFSALG----------------LSDEELESILVQKGKVA-LNQGNSFGIGGSGYQRINLA---CPRSMLE 380 (391)
T ss_dssp CCSBSSEEEEECGGGC----------------CCHHHHHHHHHHTTCEE-CEEGGGGCTTCTTEEEEECC---SCHHHHH
T ss_pred CCCccEEEEEEhhhcC----------------CCHHHHHHHHHHhCCEE-eeCchhhCCCCCCeEEEEEc---CCHHHHH
Confidence 3 4443 5554210 0134677778777 764 4443 22 23578999985 4788999
Q ss_pred HHHHHHHHHH
Q 048643 486 VAWTMVQEQL 495 (506)
Q Consensus 486 ~li~~l~~~~ 495 (506)
++++.|+++.
T Consensus 381 ~~l~~l~~~l 390 (391)
T 4dq6_A 381 EALIRIKNAI 390 (391)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 59
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.90 E-value=1e-22 Score=210.57 Aligned_cols=324 Identities=12% Similarity=0.056 Sum_probs=217.2
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|... ..++++++.+|+++.+|++... ...++++||++|+..++.+++.
T Consensus 79 v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~ea~~~a~~~~~~---------- 141 (421)
T 3l8a_A 79 IKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVK-----EDILFIDGVVPAISIALQAFSE---------- 141 (421)
T ss_dssp HHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC----------
T ss_pred HHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC----------
Confidence 3344444443333334332 3789999999999999964332 2789999999999988887643
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT-KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-- 265 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-- 265 (506)
++..|++...+|.++..++...|. +++.+|.+ .++++.+|+++|++++++. .+.+|+++.+.+++|.+
T Consensus 142 -~gd~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 142 -KGDAVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp -TEEEEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCCC
T ss_pred -CCCEEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcCC
Confidence 556788888999999999999999 99999986 3456789999999999742 24478888899999999
Q ss_pred -cChhHHHHHHHHhCCEEEeecccccccccCccchhhhc---CCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhh
Q 048643 266 -DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID---GVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 266 -dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~---gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~ 340 (506)
+++++|+++|++||+++++|++|+++............ .....+.+..+++|+++ ....+|+++++++... +.+
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~-~~~ 291 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLR-RKF 291 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHH-HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHH-HHH
Confidence 78999999999999999999999875432211111111 11134466788999997 5577899988865543 222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--c
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--S 415 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~ 415 (506)
....... +......+....+..+++. +.+.++++.++..++++++.+.|++.|+++ | .
T Consensus 292 ~~~~~~~----------------~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~ 354 (421)
T 3l8a_A 292 QYRQLAN----------------NQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGT 354 (421)
T ss_dssp HHHHHHT----------------TCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBS
T ss_pred HHHHHhc----------------ccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCee
Confidence 1110000 0001111112233333442 566788899999999999999998877877 3 4
Q ss_pred eEE-EeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 416 AVM-DKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 416 ~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
.+. +.+...+. ...++.+.|.++ |+ ++.+.. + .+..++|+++. +++++|+++++.
T Consensus 355 ~~~~v~~~~~~~----------------~~~~l~~~l~~~~gi-~v~~g~~f~~~~~~~iRi~~~---~~~~~i~~~l~~ 414 (421)
T 3l8a_A 355 YLVWLDFSAYAI----------------AQPQLSEKLQNEAKV-VLNDGAHFGKEGKYFARLNVA---TPKNTVQEALSR 414 (421)
T ss_dssp SEEEEECGGGTC----------------CTTHHHHHHHHTTCE-ECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHH
T ss_pred EEEEEeccccCC----------------CHHHHHHHHHHhCCE-EEECchhhCCCCCCEEEEEec---CCHHHHHHHHHH
Confidence 333 44432100 023566667544 65 444432 2 23578999985 578899999999
Q ss_pred HHHHHH
Q 048643 491 VQEQLE 496 (506)
Q Consensus 491 l~~~~~ 496 (506)
|+++.+
T Consensus 415 l~~~l~ 420 (421)
T 3l8a_A 415 IISVFG 420 (421)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 988653
No 60
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.90 E-value=9.7e-22 Score=201.90 Aligned_cols=329 Identities=13% Similarity=0.109 Sum_probs=216.1
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 106 AGFLGEMLSSGFNVV---GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
+..+.+.+...+... .. |...+...++++.+.+|+.+.+|++.+. ...++|+|||+|+..++.++..
T Consensus 51 ~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~~---- 120 (407)
T 2zc0_A 51 RAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP-----ENIVITIGGTGALDLLGRVLID---- 120 (407)
T ss_dssp HHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEecCHHHHHHHHHHHhcC----
Confidence 344445444444321 23 5444567899999999999988964321 2789999999999888877643
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE-EEeccCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFL-CATIGTTA 261 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~V-v~t~gtt~ 261 (506)
++..|+++..+|.++..+++..|. +++.+|.++ + .+|+++|++++++....+..+.+| +...++|+
T Consensus 121 -------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~np 187 (407)
T 2zc0_A 121 -------PGDVVITENPSYINTLLAFEQLGA---KIEGVPVDN--D-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNP 187 (407)
T ss_dssp -------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTT
T ss_pred -------CCCEEEEeCCChHHHHHHHHHcCC---EEEEcccCC--C-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCC
Confidence 456778888999999999999999 999999875 3 399999999998433232234455 56778999
Q ss_pred CCcccChh---HHHHHHHHhCCEEEeecccccccccCccchhhhcCC--CCCCeeEEcCccccCCCCcceEEEEeCchhH
Q 048643 262 ITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSAL 336 (506)
Q Consensus 262 tG~idpl~---~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 336 (506)
+|.+.|++ +|+++|++||+++|+|++|+++......... +..+ ...+.+..+++|+++....+|+++++ +..
T Consensus 188 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~- 264 (407)
T 2zc0_A 188 MGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEI- 264 (407)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTCTTSCCEEEECC-HHH-
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccCCCcceEEEecC-HHH-
Confidence 99998876 9999999999999999999876432111111 1111 12334667789999944568998875 332
Q ss_pred HhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--c--h-hHHHHHHHHHHHHHHHHHHHHHc-CC
Q 048643 337 VSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--G--V-ANLRHFLRSHVNMAKLFERLVAS-DK 410 (506)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G--~-~g~~~~i~~~~~~a~~l~~~l~~-~~ 410 (506)
...+....... +. ....+..+++...+ + . +.++++.++..++++++.+.|++ .|
T Consensus 265 ~~~~~~~~~~~----------------~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 324 (407)
T 2zc0_A 265 LKKVLMQKQPI----------------DF----CAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLP 324 (407)
T ss_dssp HHHHHHHHTTT----------------TS----SSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhh----------------cC----CCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22332100000 00 01222222333222 2 2 45666777888899999999987 56
Q ss_pred CCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-E----CCEEEEEEEecCCC
Q 048643 411 RVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-C----GGIYAMRFAVGATL 478 (506)
Q Consensus 411 ~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~----~g~~~lR~~~~~~~ 478 (506)
+++ | .++.+++.... ...++.+.|.++ |+. +.+.. + .+..++|+++...
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~l~~~~gi~-v~~g~~~~~~~~~~~~iRis~~~~- 385 (407)
T 2zc0_A 325 NAEFTKPIAGMFVMFFLPEGA-----------------DGISFANELMEREGVV-VVPGKPFYTDESGKNAIRLNFSRP- 385 (407)
T ss_dssp TSCBCCCSBSSEEEEECSTTC-----------------CHHHHHHHHHHHTCEE-CBCSGGGCSSSCCTTEEEEECSSS-
T ss_pred CCEEecCCCcEEEEEEcCCCC-----------------CHHHHHHHHHHhCCeE-EECchhccCCCCCCCeEEEEeCCC-
Confidence 666 4 46667664310 124567777777 764 44332 2 1356899999644
Q ss_pred CCHHHHHHHHHHHHHHHHHHHc
Q 048643 479 TEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 479 tt~edi~~li~~l~~~~~~l~~ 500 (506)
++++|+++++.|+++.+++.+
T Consensus 386 -~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 386 -SKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp -CTTHHHHHHHHHHHHHHHHC-
T ss_pred -CHHHHHHHHHHHHHHHHHHhc
Confidence 677999999999999877643
No 61
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=8.2e-23 Score=206.80 Aligned_cols=333 Identities=12% Similarity=0.021 Sum_probs=216.2
Q ss_pred CCCCCHHHHHHHHHHhhcC---CCCcc---cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE-cCCchHHHHHH
Q 048643 100 PSSGSIAGFLGEMLSSGFN---VVGFN---WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCT 172 (506)
Q Consensus 100 ~~~~~~~~~~~~~l~~~~n---~~~~~---~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~a~l~a 172 (506)
...+.++.++..+.....+ +.... ...++.+.++-+++++.+++++|.+++. ..+| |+|||+++..+
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~a 93 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNY------KVIFLQGGGCGQFSAV 93 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEcCchHHHHHHH
Confidence 3445566666555544332 21111 2345667888888999999999997643 5777 68999998777
Q ss_pred HHHHHHHHHHhhcccCCCCeEEEeCCCCchHH--HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 048643 173 LTAARDRVLNKIGRENISKLVVYGSDQTHCAL--QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVP 250 (506)
Q Consensus 173 l~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p 250 (506)
+...... + ++..+++....|++. .+.++..|. .++.+|+++ ++..+++.++.++++++
T Consensus 94 ~~~l~~~---~------~Gd~v~~~~~g~~~~~~~~~a~~~G~---~~~~~~~~~--~~~~~~~~~~~~i~~~t------ 153 (377)
T 3e77_A 94 PLNLIGL---K------AGRCADYVVTGAWSAKAAEEAKKFGT---INIVHPKLG--SYTKIPDPSTWNLNPDA------ 153 (377)
T ss_dssp HHHHGGG---S------TTCEEEECCCSHHHHHHHHHHTTTSE---EEECSCCCS--SSCSCCCGGGCCCCTTC------
T ss_pred HHhccCC---C------CCCeEEEEECCHHHHHHHHHHHHhCC---ceEEeccCC--CcCCCCChHHhccCCCc------
Confidence 6643221 0 234454455666653 334444566 677778764 34677777766665443
Q ss_pred EEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEE
Q 048643 251 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 330 (506)
Q Consensus 251 ~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~ 330 (506)
.+|++++.+|.+|.+.|+ +|+++|+++|||++++.+....+-- ..|.+++++|||++ |.|.|++++
T Consensus 154 ~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~--------~~~~~~~s~~K~~g-p~G~g~l~~ 219 (377)
T 3e77_A 154 SYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVS--------KFGVIFAGAQKNVG-SAGVTVVIV 219 (377)
T ss_dssp SCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGG--------GCSEEEEEGGGTTS-CTTCEEEEE
T ss_pred cEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchh--------hcCEEEEecccccC-CCccEEEEE
Confidence 378899999999999999 4788999999999998887766532 33458899999995 999999999
Q ss_pred eCchhHHhhhc-CCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHH
Q 048643 331 KDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVA 407 (506)
Q Consensus 331 r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~ 407 (506)
|++.. . .+. ..+.|+...... . ......+-. +..+.+-.+++.+-.+ |++++.++..++++++.+.|+
T Consensus 220 ~~~~l-~-~~~~~~p~~~~~~~~~-----~--~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~ 290 (377)
T 3e77_A 220 RDDLL-G-FALRECPSVLEYKVQA-----G--NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIID 290 (377)
T ss_dssp ETTSC-S-CCCTTSCGGGCHHHHH-----T--TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHH-h-hccCCCCchhhHHHHh-----h--cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 97642 1 111 112232100000 0 000001111 1224555667777677 899999999999999999999
Q ss_pred cCCCCc-----c-----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCC
Q 048643 408 SDKRVS-----P-----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGAT 477 (506)
Q Consensus 408 ~~~~~~-----p-----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 477 (506)
++|+++ + .+++|++.... .+ .++...+.+.+.+.|++...+ ....+.+|+++. .
T Consensus 291 ~~~g~~~~~~~~~~rs~~ivsf~~~~~~---------~~----~~~~~~~l~~l~~~Gi~~~~g--~~~~g~iRiS~~-~ 354 (377)
T 3e77_A 291 NSQGFYVCPVEPQNRSKMNIPFRIGNAK---------GD----DALEKRFLDKALELNMLSLKG--HRSVGGIRASLY-N 354 (377)
T ss_dssp TSTTSEECCSCGGGBCSSEEEEEESSTT---------CC----HHHHHHHHHHHHHTTEESCBC--CTTTCSEEEECC-T
T ss_pred hcCCceecCCCHHHcCCcEEEEEcCCCC---------Cc----hhHHHHHHHHHHHCCcEEeCC--CCcCCEEEEECC-C
Confidence 998776 1 46999986521 00 122345666666778643222 122346999996 4
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 048643 478 LTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~~~~ 497 (506)
.+|++||++++++|+++.++
T Consensus 355 ~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 355 AVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 67888999999999998765
No 62
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.90 E-value=1.7e-21 Score=199.62 Aligned_cols=294 Identities=12% Similarity=0.061 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+.+++++|.+ . .+++++||+++..++.++.. ++..|+++...|.++..+++..
T Consensus 90 ~~~~~l~~~la~~~g~~-~--------~i~~~sGs~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 149 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME-D--------AILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC 149 (401)
T ss_dssp HHHHHHHHHHHHHHTCS-E--------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCC-c--------EEEeCChHHHHHHHHHHHcC-----------CCCEEEEcchhHHHHHHHHHHc
Confidence 34455566777777876 2 35666778898877666432 5567888999999999999988
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc-c
Q 048643 212 GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA-G 290 (506)
Q Consensus 212 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g-g 290 (506)
|. +++.+| .+|+++|++++++....+..+.+|+++.++|++|.+.|+++|+++|++||+++++|++|+ +
T Consensus 150 g~---~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g 219 (401)
T 1fc4_A 150 KA---KRYRYA-------NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVG 219 (401)
T ss_dssp CS---EEEEEC-------TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTT
T ss_pred CC---ceEEEC-------CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccc
Confidence 98 888776 358999999998754443346688889999999999999999999999999999999996 4
Q ss_pred ccccCccchhhhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCC
Q 048643 291 SACICPEFQHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
.............++ ...|.++.++||+++.+.+ |+++++ ++.. +.+.. ..+|.. ..
T Consensus 220 ~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~-~~~~-~~l~~~~~~~~~-----------------~~- 278 (401)
T 1fc4_A 220 FVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAAR-KEVV-EWLRQRSRPYLF-----------------SN- 278 (401)
T ss_dssp TSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEEC-HHHH-HHHHHHCHHHHH-----------------SC-
T ss_pred ccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-EEEEcC-HHHH-HHHHHhCcCcee-----------------CC-
Confidence 331111110111222 2579999999999966665 887774 3333 22221 111210 00
Q ss_pred CCCCchHHH---HHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHH
Q 048643 369 RRFRSLKLW---LVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 369 r~~~al~~~---~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
....+..+ .+++.+.. .+++.++..++++++.+.|++. +++ | +++.+++..
T Consensus 279 -~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~----------------- 337 (401)
T 1fc4_A 279 -SLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAA-GFTLAGADHAIIPVMLGD----------------- 337 (401)
T ss_dssp -CCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHT-TCCBCCSSSSEEEEEEEC-----------------
T ss_pred -CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCEEEEEcCC-----------------
Confidence 11223333 33333321 4677888899999999999987 676 3 777777632
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.....++.+.|.++|+. +.+... .+..++|+++. ..+++++++++++.|+++.+++.
T Consensus 338 ~~~~~~l~~~l~~~gi~-v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 338 AVVAQKFARELQKEGIY-VTGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp HHHHHHHHHHHHHTTEE-CCEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHCCcE-EeeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 12245677778778764 443322 23578999984 56688899999999999987763
No 63
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.90 E-value=7.8e-22 Score=201.08 Aligned_cols=317 Identities=9% Similarity=0.057 Sum_probs=207.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH-
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL- 204 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~- 204 (506)
.++.+.++.+++.+++++++|.+. ..++|+|||+|+..++... . ++..|+++...|++.
T Consensus 29 ~~~~~~~~~~~~~~~l~~~~~~~~--------~v~~~~sgt~a~~~~~~~~-----~-------~gd~vi~~~~~~~~~~ 88 (379)
T 3ke3_A 29 MSKAFQEVMNDLLSNLKTVYNAEA--------AVIIPGSGTYGMEAVARQL-----T-------IDEDCLIIRNGWFSYR 88 (379)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSE--------EEEEESCHHHHHHHHHHHH-----C-------TTCEEEEEECSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCC--------EEEEcCChhHHHHHHHHhC-----C-------CCCeEEEEeCCchhHH
Confidence 367777888899999999999872 5789999999988765322 1 445566666777653
Q ss_pred -HHHHHHhCCCCCCeEEEecCCCC------C-cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHH
Q 048643 205 -QKAAQIVGIDLKNFRAIKTTKSS------S-YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCD 273 (506)
Q Consensus 205 -~ka~~~~G~g~~~v~~v~~~~~~------~-~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ 273 (506)
...++..|++. +++.++.+..+ . +.+|+++|++++++.. +.+|++++.+|++|.+.| +++|++
T Consensus 89 ~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~~~~~l~~i~~ 162 (379)
T 3ke3_A 89 WTQILEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIILSEEYIKALSE 162 (379)
T ss_dssp HHHHHHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred HHHHHHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeCCHHHHHHHHH
Confidence 34556666521 56777764311 1 2689999999996531 337888999999999999 999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc--CCccccCCcc
Q 048643 274 VAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS--TNPEYLKNKA 351 (506)
Q Consensus 274 ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~--~~~~yl~~~~ 351 (506)
+|++||+++|+|++++ +....+- ... ++|.++.++|||++.|.++|++++++... +.+. ....|.....
T Consensus 163 ~~~~~~~~li~D~~~~-g~~~~~~-~~~-----~~d~~~~s~~K~l~~~~g~g~~~~~~~~~--~~l~~~~~~~~~~~~~ 233 (379)
T 3ke3_A 163 AVHSVGGLLVIDCIAS-GCVWLDM-KEL-----GIDVLISAPQKGWSSTPCAGLVMLSAAAI--KKVESTESNCFSLDLK 233 (379)
T ss_dssp HHHHTTCEEEEECTTC-TTCCCCH-HHH-----TCSEEEECTTTTTCSCCCEEEEEECHHHH--HHHHTCCCSCSTTCHH
T ss_pred HHHHcCCEEEEEeccc-CCccccc-ccc-----CCCEEEecchhhcCCCCceEEEEECHHHH--HhhhcCCCCceeecHH
Confidence 9999999999999997 4332221 111 68999999999999999999999876432 2221 1112221100
Q ss_pred -ccC-CCccCCCCccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-----c-eEEE
Q 048643 352 -TES-KQVVDYKDWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-----S-AVMD 419 (506)
Q Consensus 352 -~~~-~~~~~~~~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-----~-~v~f 419 (506)
... ......+......+... ....+-.++..+..+|++++.++..++++++++.|+++ +++ | + ++.|
T Consensus 234 ~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~ 312 (379)
T 3ke3_A 234 QWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVS 312 (379)
T ss_dssp HHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEE
T ss_pred HHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEE
Confidence 000 00000000000011111 11244466666667789999999999999999999987 666 1 3 3333
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE------CCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC------GGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.. +. .. ..+.+.|.+.|+. +.+... .+..++|++++. .+|++||++++++|++
T Consensus 313 ~~-~~----------------~~--~~~~~~L~~~Gi~-v~~g~~~~~~~~~~~~~lRis~~~-~~t~~di~~~~~~l~~ 371 (379)
T 3ke3_A 313 YT-ER----------------DD--MHKGSAFAEAGLQ-IAAGVPLKVGEPDNFKTFRLGLFG-LDKLTDIDGTVERFEK 371 (379)
T ss_dssp EC-SC----------------HH--HHSSHHHHHTTCC-CEECCCCSSCCCTTCCEEEEECCS-HHHHTCHHHHHHHHHH
T ss_pred cc-CC----------------cc--hHHHHHHHHCCeE-EeCCccccccccCcCCEEEEeCCc-CCCHHHHHHHHHHHHH
Confidence 32 21 01 1124556667874 443321 225689999964 5588899999999999
Q ss_pred HHHHHH
Q 048643 494 QLEAFL 499 (506)
Q Consensus 494 ~~~~l~ 499 (506)
+.+++.
T Consensus 372 ~l~~~~ 377 (379)
T 3ke3_A 372 ALDEVL 377 (379)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 988775
No 64
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.90 E-value=1.1e-22 Score=205.25 Aligned_cols=333 Identities=11% Similarity=0.013 Sum_probs=215.5
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcC----CCCccc---ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE-cCCc
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFN----VVGFNW---ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTT 165 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~---~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~gg 165 (506)
+.+.|.|++...+..+.+.+...+. +....+ ..++.+.++-.++++.+++++|.++.. ..+| |+||
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~------~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY------EVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCcH
Confidence 3455667766555555555544432 111111 225566778888999999999997543 5677 9999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHh
Q 048643 166 CEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVE 245 (506)
Q Consensus 166 t~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~ 245 (506)
|+++..++.... . +....+|+++...|..+ +.++..|+ +++.+++++++.+..+++. + |++++
T Consensus 79 T~a~n~~~~~~~-~--------~~~~~~i~~~~~~~~~~-~~a~~~G~---~v~~~~~~~~g~~~~~~~~-~--l~~~t- 141 (361)
T 3m5u_A 79 SLQFAMIPMNLA-L--------NGVCEYANTGVWTKKAI-KEAQILGV---NVKTVASSEESNFDHIPRV-E--FSDNA- 141 (361)
T ss_dssp HHHHHHHHHHHC-C--------SSCEEEEECSHHHHHHH-HHHHHTTC---CEEEEEECTTTTSCSCCCC-C--CCTTS-
T ss_pred HHHHHHHHHhcC-C--------CCeEEEEeCCHHHHHHH-HHHHHcCC---ceEEEecccCcCCCcCChh-h--cCCCC-
Confidence 999877665432 1 11223566665666544 44566788 9999999864312256655 3 65443
Q ss_pred cCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcc
Q 048643 246 AGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDC 325 (506)
Q Consensus 246 ~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~ 325 (506)
.+|.+++.+|.+|.+.|. |++ +|+++|||++++.+....+- ..+|.+++++|||++ |.|+
T Consensus 142 -----~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~--------~~~d~~~~s~~K~~g-p~G~ 201 (361)
T 3m5u_A 142 -----DYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDF--------SNIALFYGGVQKNAG-ISGL 201 (361)
T ss_dssp -----SEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCC--------TTEEEEEEETTTTSS-CTTC
T ss_pred -----CEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCc--------ccCCEEEEechhccC-CCcc
Confidence 378889999999998552 333 49999999999887776652 257899999999996 9999
Q ss_pred eEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHH
Q 048643 326 CCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLF 402 (506)
Q Consensus 326 g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l 402 (506)
|++++|++.. ...-. ..+.|+....... .. ....+-. ...+.+-.+++.+-.. |++++.++..++++++
T Consensus 202 g~l~~~~~~~-~~~~~~~~p~~~~~~~~~~---~~----~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l 273 (361)
T 3m5u_A 202 SCIFIRKDML-ERSKNKQIPSMLNYLTHAE---NQ----SLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATML 273 (361)
T ss_dssp EEEEEEHHHH-HHHHTCCCCGGGCHHHHHH---TT----TCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred EEEEEcHHHH-hhhcCCCCCceeehHHHhh---cC----CCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 9999987543 11111 1223321100000 00 0001111 1224556677777677 8999999999999999
Q ss_pred HHHHHcCCCC-c----c-----ceEEEeecC-CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEE
Q 048643 403 ERLVASDKRV-S----P-----SAVMDKLKP-KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMR 471 (506)
Q Consensus 403 ~~~l~~~~~~-~----p-----~~v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR 471 (506)
.+.|++++++ + | .+++|++.+ .. ....+...|.+.|+. +... ......+|
T Consensus 274 ~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~-----------------~~~~~~~~L~~~gI~-~~~g-~~~~g~iR 334 (361)
T 3m5u_A 274 YECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKD-----------------LEPLFVKEAEEAGMI-GLKG-HRILGGIR 334 (361)
T ss_dssp HHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTT-----------------HHHHHHHHHHHTTEE-CCBC-CTTTCSEE
T ss_pred HHHHHHCCCeeeccCCHHHcCCeEEEEECCCchh-----------------hhHHHHHHHHHCCCE-EecC-CCccCeEE
Confidence 9999999866 3 1 589999864 21 113566677777864 3222 11224599
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+++++ .+|++||++++++|+++.++
T Consensus 335 iS~~~-~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 335 ASIYN-ALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp EECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred EEccC-CCCHHHHHHHHHHHHHHHHh
Confidence 99965 57888999999999998765
No 65
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.89 E-value=9.6e-22 Score=204.04 Aligned_cols=321 Identities=12% Similarity=0.093 Sum_probs=214.5
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
|....+..++++.+.+|+.+..|..... .....++|+||++||..++.+.+. ++..|+++...|.+
T Consensus 82 y~~~~g~~~l~~~la~~~~~~~~~~~~~---~~~~v~~~~gg~~a~~~~~~~l~~-----------~gd~vl~~~p~~~~ 147 (435)
T 3piu_A 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTF---DPNHLVLTAGATSANETFIFCLAD-----------PGEAVLIPTPYYPG 147 (435)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTSSCC---CGGGEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEESCCTT
T ss_pred cCCCCCcHHHHHHHHHHHHHhhCCCCCC---CHHHEEEcCChHHHHHHHHHHhcC-----------CCCeEEECCCcccc
Confidence 3344456889999999999876632110 012789999999999888877643 55678888899999
Q ss_pred HHHHHH-HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHhC
Q 048643 204 LQKAAQ-IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQFG 279 (506)
Q Consensus 204 ~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~g 279 (506)
+..++. ..|. +++.+|.++++++.+|+++|+++|++..+.+..+.+|+++.++|++|.+- ++++|+++|++||
T Consensus 148 ~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 224 (435)
T 3piu_A 148 FDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKG 224 (435)
T ss_dssp HHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCC---EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 998887 6788 99999998655578999999999988766666677888999999999994 4688999999999
Q ss_pred CEEEeecccccccccCccc---hhhhcCC--------CCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCcccc
Q 048643 280 IWVHVDAAYAGSACICPEF---QHFIDGV--------EGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYL 347 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~---~~~~~gi--------~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl 347 (506)
+++++|++|+++....... ....... ..-..+..++||+++ ....+|+++++++... ..+.....+.
T Consensus 225 ~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~~~~~~ 303 (435)
T 3piu_A 225 IHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATKMSSFG 303 (435)
T ss_dssp CEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHHHGGGS
T ss_pred CEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHHHhhcC
Confidence 9999999998754322211 1111100 012266789999997 4467899888665432 2222111111
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-----hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ce
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-----VANLRHFLRSHVNMAKLFERLVASDKRVS---P---SA 416 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-----~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~ 416 (506)
. . ..+...+....+. .+.++++.++..++++++.+.|++. +++ | .+
T Consensus 304 ~------------------~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~ 360 (435)
T 3piu_A 304 L------------------V----SSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLF 360 (435)
T ss_dssp C------------------C----CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSE
T ss_pred C------------------C----CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEE
Confidence 0 0 1122222222221 2345677788888999999999987 676 3 45
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+.+.+..... ... .....++.+++.++ |+ ++.+.. + .+..++|+++.. . ++++|+++++.|.
T Consensus 361 ~~~~l~~~~~-------~~~----~~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRi~~~~-~-~~e~i~~~l~~l~ 426 (435)
T 3piu_A 361 CWVDMRHLLR-------SNT----FEAEMELWKKIVYEVHL-NISPGSSCHCTEPGWFRVCFAN-L-PERTLDLAMQRLK 426 (435)
T ss_dssp EEEECGGGSS-------SSS----HHHHHHHHHHHHHTSCE-ECEEGGGGTCSSTTEEEEECSS-S-CHHHHHHHHHHHH
T ss_pred EEEEcccccc-------cCC----chhHHHHHHHHHHHCCE-EEeCCcccCCCCCCEEEEEeeC-C-CHHHHHHHHHHHH
Confidence 5555533100 000 11235667777666 76 444432 2 346789999843 3 7889999999999
Q ss_pred HHHHHHH
Q 048643 493 EQLEAFL 499 (506)
Q Consensus 493 ~~~~~l~ 499 (506)
++.+++.
T Consensus 427 ~~l~~~~ 433 (435)
T 3piu_A 427 AFVGEYY 433 (435)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9887653
No 66
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.89 E-value=3e-21 Score=199.78 Aligned_cols=319 Identities=11% Similarity=0.058 Sum_probs=212.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
|....+..++++.+.+|+.+.+|.+... .....++++|+++++..++.+... ++..|+++..+|.+
T Consensus 79 Y~~~~g~~~lr~~la~~~~~~~g~~~~~---~~~~i~~~~G~~~ai~~~~~~~~~-----------~gd~Vl~~~p~y~~ 144 (428)
T 1iay_A 79 FQDYHGLPEFRKAIAKFMEKTRGGRVRF---DPERVVMAGGATGANETIIFCLAD-----------PGDAFLVPSPYYPA 144 (428)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTCSCC---CTTSCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEESSCCTT
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCC---ChhhEEEccChHHHHHHHHHHhCC-----------CCCeEEEccCCCcc
Confidence 4333347899999999999988854110 012678999999999887776543 45678888899988
Q ss_pred HHHHH-HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhC
Q 048643 204 LQKAA-QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFG 279 (506)
Q Consensus 204 ~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g 279 (506)
+...+ ...|+ +++.+|.+.++++.+|+++|++++++..+.+..+.+|+++.++|++|.+.| +++|+++|++||
T Consensus 145 ~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 221 (428)
T 1iay_A 145 FNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHN 221 (428)
T ss_dssp HHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTT
T ss_pred hHHHHHHhcCC---EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCC
Confidence 87755 36788 899999875445789999999999876555555677888889999999998 999999999999
Q ss_pred CEEEeecccccccccCcc---chhhhcC----CCCCC--eeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCC
Q 048643 280 IWVHVDAAYAGSACICPE---FQHFIDG----VEGAD--SFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~---~~~~~~g----i~~aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
+++++|++|+++...... ....... --..| .+..++||+++.| ..+|++++.++.... .+.....+.
T Consensus 222 ~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~-~~~~~~~~~-- 298 (428)
T 1iay_A 222 IHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVN-CARKMSSFG-- 298 (428)
T ss_dssp CEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHH-HHHHHHTTS--
T ss_pred eEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHH-HHHHHHhcc--
Confidence 999999999875432111 1111110 00267 5788999999744 557988886654332 222110000
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHHHHHhch-----hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEE
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-----ANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVM 418 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-----~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~ 418 (506)
+ ...+...++...+.. +.++++.++..++++++.+.|++. +++ | +++.
T Consensus 299 --------------~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~ 357 (428)
T 1iay_A 299 --------------L------VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCW 357 (428)
T ss_dssp --------------C------CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEE
T ss_pred --------------c------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEE
Confidence 0 112333333333322 356778888889999999999987 666 3 4566
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
+++..... ... .....++.+.|.++ |+.......+. +..++|+++. ..++++++++++.|+++.
T Consensus 358 ~~~~~~~~-------~~~----~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 358 MDLRPLLR-------EST----FDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFV 424 (428)
T ss_dssp EECGGGCS-------SSS----HHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHH
T ss_pred EechhhcC-------CCc----hhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHH
Confidence 66643100 000 11234677888776 76433322222 2468999995 368889999999999876
Q ss_pred H
Q 048643 496 E 496 (506)
Q Consensus 496 ~ 496 (506)
+
T Consensus 425 ~ 425 (428)
T 1iay_A 425 G 425 (428)
T ss_dssp H
T ss_pred h
Confidence 4
No 67
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.89 E-value=5.3e-22 Score=205.59 Aligned_cols=333 Identities=11% Similarity=0.047 Sum_probs=218.6
Q ss_pred HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...+... ...|...+...++++.+.+++... |.+... ...++|+|||+|+..++.+...
T Consensus 74 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~-----~~v~~t~g~t~al~~~~~~l~~------- 140 (427)
T 3dyd_A 74 PEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEA-----KDVILTSGCSQAIDLCLAVLAN------- 140 (427)
T ss_dssp HHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCCh-----HHEEEecCcHHHHHHHHHHhcC-------
Confidence 34444444444322 234555566778887777766544 433221 3789999999999888777643
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|..+...++..|+ +++.+|.++++++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 141 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~ 207 (427)
T 3dyd_A 141 ----PGQNILVPRPGFSLYKTLAESMGI---EVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCGSV 207 (427)
T ss_dssp ----TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCCCC
Confidence 556788888999999999999999 999999875456789999999988653 3478888899999999
Q ss_pred cC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC-CCCCee-EEcCccccCC-CCcceEEEEeCc-----h
Q 048643 266 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV-EGADSF-SLNAHKWFFT-TLDCCCLWVKDP-----S 334 (506)
Q Consensus 266 dp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi-~~aDsi-~~~~hK~l~~-p~~~g~~~~r~~-----~ 334 (506)
-| +++|+++|++||+++++|++|+++..-...+... ..+ ...+.+ +.+++|.++. ...+|++++++. .
T Consensus 208 ~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~-~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~ 286 (427)
T 3dyd_A 208 FSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPL-ATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGN 286 (427)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCG-GGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHH
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccH-HHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHH
Confidence 99 9999999999999999999998765322111111 111 122333 5589998654 356899998864 1
Q ss_pred hHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-
Q 048643 335 ALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS- 413 (506)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~- 413 (506)
.+...+........ .........+..+|+....+.+.++.++..++++++.+.|+++|+++
T Consensus 287 ~i~~~l~~~~~~~~------------------~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 348 (427)
T 3dyd_A 287 EIRDGLVKLSQRIL------------------GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRP 348 (427)
T ss_dssp HHHHHHHHHHHHHC------------------CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHHhccC------------------CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 22222211000000 00011123334444444567888999999999999999999998887
Q ss_pred --c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHH
Q 048643 414 --P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 414 --p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~l 487 (506)
| ..+.+++..... + + .....++.++|. +.|+.+..+..+....++|++++ +++++|+++
T Consensus 349 ~~p~~g~~~~~~l~~~~~---~-----~----~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~---~~~e~i~~~ 413 (427)
T 3dyd_A 349 VRPSGAMYLMVGIEMEHF---P-----E----FENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT---VPEVMMLEA 413 (427)
T ss_dssp ECCSBTTEEEEEECGGGC---T-----T----CSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC---SCHHHHHHH
T ss_pred cCCCeeEEEEEecCHhhc---C-----C----CCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC---CCHHHHHHH
Confidence 4 445555531100 0 0 001234555554 56765444444445678999984 578899999
Q ss_pred HHHHHHHHHHHH
Q 048643 488 WTMVQEQLEAFL 499 (506)
Q Consensus 488 i~~l~~~~~~l~ 499 (506)
++.|.++.+++.
T Consensus 414 l~~l~~~l~~~~ 425 (427)
T 3dyd_A 414 CSRIQEFCEQHY 425 (427)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999887764
No 68
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.89 E-value=1.9e-21 Score=198.59 Aligned_cols=325 Identities=13% Similarity=0.037 Sum_probs=215.1
Q ss_pred HHHHHHHhhcCCCCcccccChhhHH-HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATE-LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~-lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+...++.....|... ..+ +++++.+|+.+.+|++.+. ...++|+||++++..++.+...
T Consensus 45 ~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~-------- 109 (390)
T 1d2f_A 45 CIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDS-----QTVVYGPSVIYMVSELIRQWSE-------- 109 (390)
T ss_dssp HHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESCHHHHHHHHHHHSSC--------
T ss_pred HHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC--------
Confidence 44555555554433344333 567 9999999999998854321 2789999999999877776532
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCC-CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSS-SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|.++..+++..|. +++.+|.+.++ ++.+|+++|++++++. .+.+|+++.++|++|.+
T Consensus 110 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~ 178 (390)
T 1d2f_A 110 ---TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKV 178 (390)
T ss_dssp ---TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCC
T ss_pred ---CCCEEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcC
Confidence 456788888999999999999999 99999987532 4679999999998641 24567778899999999
Q ss_pred cC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CC-CeeEEcCccccC-CCCcceEEEEeCchhHHhh
Q 048643 266 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE-GA-DSFSLNAHKWFF-TTLDCCCLWVKDPSALVSS 339 (506)
Q Consensus 266 dp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~a-Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 339 (506)
-| +++|+++|++||+++++|++|+++.......... .++. .. |. ..++||+++ ....+|+++++++.... .
T Consensus 179 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~-~ 255 (390)
T 1d2f_A 179 WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPW-SNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRD-A 255 (390)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCG-GGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHH-H
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCH-HHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHH-H
Confidence 66 8999999999999999999998754321111111 1121 22 55 888999997 44568999887654332 2
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVAS-DKRVS--- 413 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~--- 413 (506)
+.....+.. +. ++ ...+..++++..+ +.+.++++.++..++++++.+.|++ +|+++
T Consensus 256 ~~~~~~~~~---------------~~-~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 317 (390)
T 1d2f_A 256 YLSALKGRD---------------GL-SS--PSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQI 317 (390)
T ss_dssp HHHHHHTTS---------------CC-CS--CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC
T ss_pred HHHHHhhhc---------------cc-CC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEec
Confidence 211000000 00 00 1223333333333 3566788888899999999999988 78877
Q ss_pred c--ceE-EEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHH
Q 048643 414 P--SAV-MDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 414 p--~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~l 487 (506)
| +.+ .+++...+ ....++.+.|. +.|+....+..+. +..++|+++.. ++++|+++
T Consensus 318 ~~~~~~~~~~~~~~~----------------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~ 378 (390)
T 1d2f_A 318 PQSTYLAWLDLRPLN----------------IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC---PRSKLEKG 378 (390)
T ss_dssp CSBCSEEEEECGGGC----------------CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHH
T ss_pred CCccEEEEEEccccC----------------CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC---CHHHHHHH
Confidence 3 444 35553210 00245777777 4676433332221 34689999964 46799999
Q ss_pred HHHHHHHHHHH
Q 048643 488 WTMVQEQLEAF 498 (506)
Q Consensus 488 i~~l~~~~~~l 498 (506)
++.|.++.+++
T Consensus 379 l~~l~~~l~~~ 389 (390)
T 1d2f_A 379 VAGLINAIRAV 389 (390)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99998887654
No 69
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.89 E-value=1.2e-21 Score=200.70 Aligned_cols=294 Identities=11% Similarity=0.023 Sum_probs=205.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA 208 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~ 208 (506)
+...+..++.+++++++|.+ ..++|+|||+|+..++.++.. ++..|+++...|.++..++
T Consensus 85 g~~~~~~~l~~~la~~~g~~---------~v~~~~ggt~a~~~~~~~~~~-----------~gd~V~~~~p~~~~~~~~~ 144 (398)
T 3a2b_A 85 GTLDIHVELEEKLSAYVGKE---------AAILFSTGFQSNLGPLSCLMG-----------RNDYILLDERDHASIIDGS 144 (398)
T ss_dssp CCCHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHSSC-----------TTCEEEEETTCCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEECCccCHHHHHHH
Confidence 34577788889999999863 579999999999888777633 5667888999999999999
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+..|. +++.+|. +|+++|++++++... ..+.+|+.+.+++++|.+.|+++|+++|++||+++++|++|
T Consensus 145 ~~~g~---~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~ 212 (398)
T 3a2b_A 145 RLSFS---KVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAH 212 (398)
T ss_dssp HHSSS---EEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCC---ceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCC
Confidence 99999 8888874 589999999875321 13567888889999999999999999999999999999999
Q ss_pred ccccccCccchhh--hcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCcc
Q 048643 289 AGSACICPEFQHF--IDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 289 gg~~~~~~~~~~~--~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
+.+..- ...... ..++ +++|.++.++||+++ |.| |+++++ +... +.+.. ...|...
T Consensus 213 ~~~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~-~~l~~~~~~~~~~--------------- 272 (398)
T 3a2b_A 213 SLGVIG-HKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGD-ADVI-DFLKHNARSVMFS--------------- 272 (398)
T ss_dssp TTTTSS-GGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEEC-HHHH-HHHHHHCHHHHSS---------------
T ss_pred cccccC-CCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeC-HHHH-HHHHHhcccceec---------------
Confidence 755331 111111 1122 247999999999998 555 887775 3332 22221 1112110
Q ss_pred ccCCCCCCc-hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHH
Q 048643 365 ITLSRRFRS-LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEE 438 (506)
Q Consensus 365 ~~~sr~~~a-l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~ 438 (506)
++-.... ..+..+|+.+ +.++++.++..++++++.+.|++. +++ | +++.+++..
T Consensus 273 --~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~~~~~~~--------------- 332 (398)
T 3a2b_A 273 --ASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLGATESPILPIFIRS--------------- 332 (398)
T ss_dssp --BCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSCCSSEEEEECCC---------------
T ss_pred --CCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCCCCCEEEEEcCC---------------
Confidence 0000011 1223444443 235577888889999999999987 676 4 666666532
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeeeEC----CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 439 AINEFNRELLESINASGKAYMTHAVCG----GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 439 ~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.....++.+.|.++|+. +.+.... +..++|+++. ..+++++++++++.|+++.+++
T Consensus 333 --~~~~~~l~~~l~~~gi~-v~~~~~~~~~~~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 333 --NEKTFWVTKMLQDDGVF-VNPVVSPAVPAEESLIRFSLM-ATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp --HHHHHHHHHHHHHTTEE-CEEECTTTSCGGGCEEEEECC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHCCcE-EEeeCCCCCCCCCceEEEEEe-CCCCHHHHHHHHHHHHHHHHHh
Confidence 12245677888888764 4443221 3578999995 4568889999999999988765
No 70
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.89 E-value=5e-22 Score=218.57 Aligned_cols=234 Identities=13% Similarity=0.102 Sum_probs=167.2
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
+..+.+++++|.+. ..++++|++++|..++.+... ++..|+++..+|.|+..++...|.
T Consensus 209 ~~ee~la~l~G~d~--------~i~~~~Gtt~a~~~~i~al~~-----------~GD~Vlv~~~~h~s~~~~~~~~G~-- 267 (755)
T 2vyc_A 209 ESEKYAARVFGADR--------SWSVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLMLTGA-- 267 (755)
T ss_dssp HHHHHHHHHHTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHhCCCc--------eEEECCcHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC--
Confidence 34488999999864 457777778888887776543 567889999999999999999999
Q ss_pred CCeEEEecCCCC---Cccc-----CHHHHHHHHHHH--H--hcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 216 KNFRAIKTTKSS---SYGL-----SPDSLLTQINLD--V--EAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 216 ~~v~~v~~~~~~---~~~~-----d~~~L~~~i~~~--~--~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
+++.++.+.++ .+.+ |+++|+++|++. + +.+..|.+|+++.+ |++|.+.|+++|+++|++||+++|
T Consensus 268 -~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~li 345 (755)
T 2vyc_A 268 -KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLH 345 (755)
T ss_dssp -EEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEE
T ss_pred -EEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEE
Confidence 99999876431 1246 999999999863 2 24566767888876 689999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCC--CCe------eEEcCccccCCCCcceEEEEeCc--hhHHhhhcCCccccCCcccc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEG--ADS------FSLNAHKWFFTTLDCCCLWVKDP--SALVSSLSTNPEYLKNKATE 353 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~--aDs------i~~~~hK~l~~p~~~g~~~~r~~--~~l~~~~~~~~~yl~~~~~~ 353 (506)
||+||++.+.+.+.++.... +.+ +|. ++.++||+++.|.++|++++++. ..-...+......+
T Consensus 346 vDeA~~~~~~~~~~~~~~~~-~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~------ 418 (755)
T 2vyc_A 346 FDEAWYGYARFNPIYADHYA-MRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH------ 418 (755)
T ss_dssp EECTTCTTGGGCGGGTTSSS-SCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT------
T ss_pred EECcCchhcccCcccCCcch-hcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh------
Confidence 99999876555544321111 124 787 99999999999999999999875 11001111000000
Q ss_pred CCCccCCCCccccCCCC--CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 354 SKQVVDYKDWQITLSRR--FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
+.+.. .....+-.+++.+..+|..+++++..++++++++.|+++++
T Consensus 419 ------------~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 419 ------------ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp ------------SCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------CCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 01111 01133445566666665678899999999999999987655
No 71
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.89 E-value=1e-22 Score=214.34 Aligned_cols=319 Identities=13% Similarity=0.067 Sum_probs=201.0
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
|..++...++|+.+++|+++++|.+.+. ....++.++|+++|+.++.+..+ ++..|+++...|.+
T Consensus 82 y~~~~~~~~le~~~~~~~a~~~g~~~~~----~~~~V~~~sGs~an~~~~~all~-----------pGD~Vl~~~~~~~~ 146 (483)
T 1rv3_A 82 YGGTEHIDELETLCQKRALQAYGLDPQC----WGVNVQPYSGSPANFAVYTALVE-----------PHGRIMGLDLPDGG 146 (483)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCTTT----EEEECCCSSHHHHHHHHHHHHTC-----------TTCEEEEECGGGTC
T ss_pred cCcchhHHHHHHHHHHHHHHHhCCCccc----CceEEEECCcHHHHHHHHHHhcC-----------CCCEEEEecCccCc
Confidence 4456677899999999999999997530 00124445556888776665432 66778888888876
Q ss_pred HHH--------HHHHhCCCCCCeEEEec--CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHH
Q 048643 204 LQK--------AAQIVGIDLKNFRAIKT--TKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCD 273 (506)
Q Consensus 204 ~~k--------a~~~~G~g~~~v~~v~~--~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ 273 (506)
+.. .+...|. .++.++. ++ ++|.+|+++|++++++. +|.+|++ ..++++ .+.|+++|++
T Consensus 147 ~~~~~~~~~~~~v~~~G~---~~~~v~~~~~~-~~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~dl~~i~~ 215 (483)
T 1rv3_A 147 HLTHGFMTDKKKISATSI---FFESMAYKVNP-DTGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLDYGRLRK 215 (483)
T ss_dssp CGGGCCBCSSCBCSHHHH---HSEEEEECBCT-TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCCHHHHHH
T ss_pred CcchhhhhcccCcccccc---eEEEEECcccc-CCCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCCHHHHHH
Confidence 543 2334443 2455554 53 35899999999999842 1346666 666666 8899999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccc
Q 048643 274 VAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSL-STNPEYLKNKAT 352 (506)
Q Consensus 274 ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~ 352 (506)
+|++||+|+|+|+||+.+....+.....+ ..+|.++.++||+|..|.+ |++++++...-.... .....|-...
T Consensus 216 ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y~~~~-- 289 (483)
T 1rv3_A 216 IADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILYNLES-- 289 (483)
T ss_dssp HHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBCCHHH--
T ss_pred HHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhhHHHH--
Confidence 99999999999999975544332222212 2689999999999999988 999998752100000 0000000000
Q ss_pred cCCCccCCC-CccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecC
Q 048643 353 ESKQVVDYK-DWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKP 423 (506)
Q Consensus 353 ~~~~~~~~~-~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~ 423 (506)
..+.. ....+++... ....+..+++.....+++++.++..++++++.+.|.+. +++ | ..+.+.+.+
T Consensus 290 ----~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~ 364 (483)
T 1rv3_A 290 ----LINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRS 364 (483)
T ss_dssp ----HHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGG
T ss_pred ----HhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccC
Confidence 00000 0001122111 12344566766666788999999999999999999988 777 2 233344332
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEe----eee--ECCEEEEEEEecCCCCC----HHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMT----HAV--CGGIYAMRFAVGATLTE----ERHVMVAWTMVQE 493 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~----~~~--~~g~~~lR~~~~~~~tt----~edi~~li~~l~~ 493 (506)
.+ .+ ..++.+.|.+.|+. +. +.. ..+..++|+++. ..++ ++|++++++.|.+
T Consensus 365 ~g---------~~-------~~~~~~~L~~~gI~-v~~~~~pg~~~~~~~~~iRis~~-~~~t~g~~~edi~~~~~~l~~ 426 (483)
T 1rv3_A 365 KG---------TD-------GGRAEKVLEACSIA-CNKNTCPGDKSALRPSGLRLGTP-ALTSRGLLEKDFQKVAHFIHR 426 (483)
T ss_dssp GT---------CC-------HHHHHHHHHHTTEE-CEEECCSSCSCTTSCCEEEEECH-HHHHTTCCHHHHHHHHHHHHH
T ss_pred CC---------CC-------HHHHHHHHHhCCcE-EecCCCCCCCcCCCCceEEeecC-CcccCCCCHHHHHHHHHHHHH
Confidence 11 01 23345556566764 33 222 124568999985 3445 8899999999998
Q ss_pred HHHH
Q 048643 494 QLEA 497 (506)
Q Consensus 494 ~~~~ 497 (506)
+.+.
T Consensus 427 ~l~~ 430 (483)
T 1rv3_A 427 GIEL 430 (483)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 72
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.89 E-value=6.2e-23 Score=208.48 Aligned_cols=313 Identities=12% Similarity=0.049 Sum_probs=204.6
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+... .|..++...++|+. +++++|.+ .+++++|||+|+..++.+++-.
T Consensus 19 ~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~i~~~sgt~al~~~l~~l~~~--------- 74 (373)
T 3frk_A 19 IKFKFEEIYKRN--WFILGDEDKKFEQE----FADYCNVN---------YCIGCGNGLDALHLILKGYDIG--------- 74 (373)
T ss_dssp HHHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHTSS---------EEEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHCC--CccCCchHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC---------
Confidence 344444444332 24456666666665 55556654 4789999999998888765211
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
++..|+++..+|.++..+++..|. +++.+|++++ ++.+|+++|+++++++ +.+|+ .++++|.+.|+
T Consensus 75 -~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l 140 (373)
T 3frk_A 75 -FGDEVIVPSNTFIATALAVSYTGA---KPIFVEPDIR-TYNIDPSLIESAITEK------TKAII---AVHLYGQPADM 140 (373)
T ss_dssp -TTCEEEEETTSCTHHHHHHHHHSC---EEEEECEETT-TTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCH
T ss_pred -CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecccc-ccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccH
Confidence 566788999999999999999999 9999999853 5799999999988653 33555 55689999999
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEc--CccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
++|+++|++||+++|+|+||+.+...... .. + ..+|.++.+ +||+++.+..+|+++.++..... .+.....+
T Consensus 141 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~--~~--~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~-~~~~~~~~ 214 (373)
T 3frk_A 141 DEIKRIAKKYNLKLIEDAAQAHGSLYKGM--KV--G-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAE-KIKALSNY 214 (373)
T ss_dssp HHHHHHHHHHTCEEEEECTTCTTCEETTE--ET--T-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHH-HHHHHHBT
T ss_pred HHHHHHHHHcCCEEEEECCcccCCEECCE--ec--c-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHH-HHHHHHhc
Confidence 99999999999999999999865543211 11 1 135777777 77999774456777776654322 11100000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c--------ceE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P--------SAV 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p--------~~v 417 (506)
-... .+. ....+..+....+..++.....++++++.++..++++++.+.|++.+ ++ | +.+
T Consensus 215 g~~~--------~~~--~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 283 (373)
T 3frk_A 215 GSEK--------KYH--HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWY 283 (373)
T ss_dssp TCSB--------TTB--CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCS
T ss_pred Cccc--------CCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeE
Confidence 0000 000 01111223334455555555567788899999999999999998875 54 2 222
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee---EC---------------------CEEEEEEE
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV---CG---------------------GIYAMRFA 473 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~---------------------g~~~lR~~ 473 (506)
.|.+... ...++.+.|.++|+. +.... .. ....+|++
T Consensus 284 ~~~~~~~------------------~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~ 344 (373)
T 3frk_A 284 TFVIRSE------------------KRDELQKYLNNNGIG-TLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIP 344 (373)
T ss_dssp SEEEEES------------------SHHHHHHHHHHTTBC-CBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEEC
T ss_pred EEEEEeC------------------CHHHHHHHHHHCCCC-cccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEcc
Confidence 2332211 034667777777863 33211 00 12689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHH
Q 048643 474 VGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 474 ~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+ ++.+|++||++++++|++...
T Consensus 345 ~-~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 345 I-WYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp C-CTTCCHHHHHHHHHHHHTCC-
T ss_pred C-CCCCCHHHHHHHHHHHHHHhh
Confidence 8 688899999999999987654
No 73
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.89 E-value=4.1e-21 Score=196.22 Aligned_cols=322 Identities=14% Similarity=0.068 Sum_probs=212.4
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+......|....+..++++.+.+++.+.+|.+.+. ...++|+||++|+..++.+...
T Consensus 48 ~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~--------- 113 (391)
T 3h14_A 48 GAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDP-----GRVVITPGSSGGFLLAFTALFD--------- 113 (391)
T ss_dssp HHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEecChHHHHHHHHHHhcC---------
Confidence 34555555555444455555557899999999999999965432 3789999999999888776533
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
++..|+++..+|.++...++.+|. +++.+|.++++++.+|+++|+++ + +.+|+++.++|++|.+-|
T Consensus 114 --~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~~~ 179 (391)
T 3h14_A 114 --SGDRVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTMLD 179 (391)
T ss_dssp --TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCccCC
Confidence 556788888999999999999999 99999998655578999999876 2 347788899999999977
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCC
Q 048643 268 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 268 ---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~ 343 (506)
+++|+++|++||+++++|++|+++..-.. ..... .....+.+..+++|+++ ....+|++++++. . ...+...
T Consensus 180 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~-~~~~~~~ 255 (391)
T 3h14_A 180 HAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTAL-ELTDECYVINSFSKYFSMTGWRVGWMVVPED-Q-VRVVERI 255 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCGG-GTCSSSEEEEESSSTTCCTTSCCEEEECCGG-G-HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcChh-hcCCCEEEEEechhccCCccceeEEEEeCHH-H-HHHHHHH
Confidence 89999999999999999999986543211 11111 12245566778999997 5577888877543 2 2222110
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ce
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SA 416 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~ 416 (506)
..+. + . ....+..++++..+ +.+.++++.++..++++++.+.|++.+... | ..
T Consensus 256 ~~~~----------------~--~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 315 (391)
T 3h14_A 256 AQNM----------------F--I--CAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFY 315 (391)
T ss_dssp HHHT----------------T--C--CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTE
T ss_pred Hhhh----------------c--c--CCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEE
Confidence 0000 0 0 01223333333332 567788889999999999999998874322 4 33
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-E---CCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-C---GGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~---~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+.+.+.... ....++.+.+.++ |+. +.+.. + .+..++|+++.. ++++|+++++.|
T Consensus 316 ~~~~~~~~~----------------~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l 375 (391)
T 3h14_A 316 VYADVSDLT----------------DDSRAFAAEILEKAGVA-VTPGLDFDPERGAGTLRFSYAR---ATADIEEGLDRL 375 (391)
T ss_dssp EEEECTTTC----------------SCHHHHHHHHHHHHCEE-CEEGGGTCTTTGGGEEEEECCS---CHHHHHHHHHHH
T ss_pred EEEecCccC----------------CCHHHHHHHHHHHCCEE-EcCchhhCCCCCCCeEEEEecC---CHHHHHHHHHHH
Confidence 444443211 0124566666554 764 44432 2 236799999854 678999999999
Q ss_pred HHHHHHHHcc
Q 048643 492 QEQLEAFLTT 501 (506)
Q Consensus 492 ~~~~~~l~~~ 501 (506)
+++.++....
T Consensus 376 ~~~~~~~~~~ 385 (391)
T 3h14_A 376 EAFMQARGEG 385 (391)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHhccc
Confidence 9988776543
No 74
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.89 E-value=4.4e-21 Score=197.35 Aligned_cols=286 Identities=10% Similarity=0.072 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+++++++|.+. .+++++|+++|..++.+... ++..|+++...|.++..+++..|
T Consensus 105 ~~~~l~~~la~~~g~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g 164 (409)
T 3kki_A 105 DKPMIEKRLAKFTGFDE---------CLLSQSGWNANVGLLQTICQ-----------PNTNVYIDFFAHMSLWEGARYAN 164 (409)
T ss_dssp TSCHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCe---------EEEecchHHHHHHHHHHhcC-----------CCCEEEECCCcCHHHHHHHHHcC
Confidence 33445577888888753 46667778999888776533 56788899999999999999999
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
. +++.++ .+|+++|++++++.. +.+|+++.+.+++|.+.|+++|+++|++||+|+++|++|+++.
T Consensus 165 ~---~~~~~~-------~~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~ 229 (409)
T 3kki_A 165 A---QAHPFM-------HNNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGT 229 (409)
T ss_dssp C---EEEEEC-------TTCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred C---eEEEec-------CCCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccc
Confidence 8 777765 368999999998742 2478888999999999999999999999999999999997654
Q ss_pred ccCccchh--hhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccCCCCccccCC
Q 048643 293 CICPEFQH--FIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 293 ~~~~~~~~--~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
+-. .... ...++ ...|.++.+++|+++.+ .|+++.++. .. +.+. ....+... .+
T Consensus 230 ~g~-~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~~-~~-~~~~~~~~~~~~~-----------------~~ 287 (409)
T 3kki_A 230 HGP-NGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNNE-VN-RCVPFISYPAIFS-----------------ST 287 (409)
T ss_dssp SSG-GGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESSS-GG-GTHHHHCHHHHHS-----------------BC
T ss_pred cCC-CCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECHH-HH-HHHHHhCcCcccc-----------------CC
Confidence 311 1110 11122 36789999999999877 466666543 22 2221 11111111 11
Q ss_pred CC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c--ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 369 RR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P--SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 369 r~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
-. .....+..+++.+.. ..++.++..++++++.+.|++. +++ + .++.+++... ..
T Consensus 288 ~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-----------------~~ 347 (409)
T 3kki_A 288 LLPYEAAGLETTLEIIES--ADNRRQHLDRMARKLRIGLSQL-GLTIRSESQIIGLETGDE-----------------RN 347 (409)
T ss_dssp CCHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHTT-TCCCCCSSSEEEEEEESH-----------------HH
T ss_pred CcHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCccCCCCCEEEEEeCCH-----------------HH
Confidence 00 111223334443322 2567778889999999999988 676 2 7777776432 22
Q ss_pred HHHHHHHHHhcCcEEEeee----eECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHA----VCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~----~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
..++.+.|.++|+. +.+. ...+..++|+++. ..+++++|++++++|+++.+.
T Consensus 348 ~~~~~~~L~~~Gv~-v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 348 TEKVRDYLESNGVF-GSVFCRPATSKNKNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHHTTEE-CEEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCce-EeeeCCCCcCCCCcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence 35677788888864 4332 2345789999984 567888999999999988764
No 75
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.89 E-value=1e-21 Score=199.78 Aligned_cols=321 Identities=10% Similarity=0.052 Sum_probs=213.1
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+......|... ..++++++.+++++.+|.+.+. ...++|+||++++..++.+...
T Consensus 41 ~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~l~~--------- 104 (383)
T 3kax_A 41 PIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQK-----EWIVFSAGIVPALSTSIQAFTK--------- 104 (383)
T ss_dssp HHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhCC---------
Confidence 34444444444333334332 5788999999999999954221 2789999999999888776533
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS-SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|.++...++..|. +++.+|.+++ +++.+|+++|+++++++ +.+|+++.++|++|.+-
T Consensus 105 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~ 173 (383)
T 3kax_A 105 --ENESVLVQPPIYPPFFEMVTTNNR---QLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPHNPIGRVW 173 (383)
T ss_dssp --TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTTT------CCEEEEESSBTTTTBCC
T ss_pred --CCCEEEEcCCCcHHHHHHHHHcCC---EEEeccceecCCcEEEcHHHHHHHhCcC------CeEEEEeCCCCCCCcCc
Confidence 556788999999999999999999 9999998642 24679999999999433 33677788999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC---CCCCeeEEcCccccC-CCCcceEEEEeCchhHHhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV---EGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSS 339 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi---~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 339 (506)
| +++|+++|++||+++++|++|+++..-.........-. ...+.+..++||+++ ....+|++++.++.... .
T Consensus 174 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-~ 252 (383)
T 3kax_A 174 KKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQ-A 252 (383)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHH-H
T ss_pred CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHH-H
Confidence 6 66677779999999999999976543221111111100 134467888999998 55678888876654332 2
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVAS-DKRVS--- 413 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~--- 413 (506)
+....... +. -....+..+++...+ +.+.++++.++..++++++.+.|++ +|+++
T Consensus 253 ~~~~~~~~----------------~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 313 (383)
T 3kax_A 253 FTSIQYRQ----------------GF---HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMK 313 (383)
T ss_dssp HHHHHHHT----------------TC---CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC
T ss_pred HHHHHhhc----------------cc---CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec
Confidence 21100000 00 011223334444443 3456788888999999999999988 78887
Q ss_pred c--ceEE-EeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHH
Q 048643 414 P--SAVM-DKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 414 p--~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~ 486 (506)
| +.+. +.+...+ ....++.+.|. +.|+ ++.++. + .+..++|++++ +++++|++
T Consensus 314 ~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~ 373 (383)
T 3kax_A 314 PEGSFLLWIDCSALN----------------LSQDERTKLLEEKGKI-IVEPGEKYGLGGEEHIGINIG---CPRSVLEE 373 (383)
T ss_dssp CSBSSEEEEECGGGC----------------CCHHHHHHHHHHTSCE-ECEESGGGCTTCTTEEEEECS---SCHHHHHH
T ss_pred CCceEEEEEEccccC----------------CCHHHHHHHHHhhCCE-EeECchhhcCCCCCeEEEEEc---CCHHHHHH
Confidence 3 4444 4443210 01346677776 5676 444432 2 23578999986 47889999
Q ss_pred HHHHHHHHH
Q 048643 487 AWTMVQEQL 495 (506)
Q Consensus 487 li~~l~~~~ 495 (506)
+++.|+++.
T Consensus 374 ~l~~l~~~l 382 (383)
T 3kax_A 374 ILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998764
No 76
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.89 E-value=5.5e-22 Score=201.12 Aligned_cols=303 Identities=12% Similarity=0.071 Sum_probs=196.6
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+.+++++|.+ ..++++|||+|+..++.+++.. . .++..|+++..+|.++..+++..|+
T Consensus 36 ~l~~~la~~~~~~---------~v~~~~ggt~al~~~~~~~~~~-~-------~~gd~Vl~~~~~~~~~~~~~~~~g~-- 96 (375)
T 2fnu_A 36 LFEEALCEFLGVK---------HALVFNSATSALLTLYRNFSEF-S-------ADRNEIITTPISFVATANMLLESGY-- 96 (375)
T ss_dssp HHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHSSCC-C-------TTSCEEEECSSSCTHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhccc-C-------CCCCEEEECCCccHhHHHHHHHCCC--
Confidence 3445677777765 4799999999998888776310 0 0556888999999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccC
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 295 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~ 295 (506)
+++.+|++++ +.+|+++|+++++++ +.+|+.+.+ +|.+.|+++|+++|++||+++|+|++|+.+....
T Consensus 97 -~~~~~~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~ 164 (375)
T 2fnu_A 97 -TPVFAGIKND--GNIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQ 164 (375)
T ss_dssp -EEEECCBCTT--SSBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEET
T ss_pred -EEEEeccCCC--CCCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeEC
Confidence 9999998753 489999999888643 335566554 8999999999999999999999999997654432
Q ss_pred ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEe-CchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCch
Q 048643 296 PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK-DPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSL 374 (506)
Q Consensus 296 ~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r-~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al 374 (506)
. + .+.....++..++++||+++ | |+|+++++ +++.. +.+.. +......+. ....+. ....+.++...
T Consensus 165 ~--~-~~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~-~~~~~---~~~~~~~~~-~~~~~~--~~~~~~~~~~~ 232 (375)
T 2fnu_A 165 N--K-KVGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELH-EKMKL---FRSHGMLKK-DFFEGE--VKSIGHNFRLN 232 (375)
T ss_dssp T--E-ETTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHH-HHHHH---HTBTTEEES-SSSCEE--ESSCCCBCCCC
T ss_pred C--e-eccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHH-HHHHH---HHhcCCccc-cccccc--cccccccCCCC
Confidence 1 1 11112246677888889994 4 78888885 44332 22211 100000000 000000 00111112223
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--------ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 375 KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--------SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 375 ~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
.+..++.....++++++.++..++++++.+.|+++|+++ | .++.+++.... .. .
T Consensus 233 ~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~ 297 (375)
T 2fnu_A 233 EIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF--------------FT-C 297 (375)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG--------------GG-G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc--------------cc-h
Confidence 333333333457888999999999999999999988776 1 12244443210 00 1
Q ss_pred HHHHHHHHHhcCcEEEeee----e----EC--------------CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHA----V----CG--------------GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~----~----~~--------------g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..++.+.|.+.|+. +... . +. +..++|+++ ++.++++||++++++|+++.+++
T Consensus 298 ~~~l~~~L~~~gi~-v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 298 KKLILESLHKRGIL-AQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPC-HANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHHHHHTTEE-CBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCC-ccccccccccchhhhcCCCccCChHHHHHHhCEEEecC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 34567777777764 3311 0 00 126899998 46778889999999999988765
No 77
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.89 E-value=2.9e-22 Score=203.33 Aligned_cols=314 Identities=14% Similarity=0.124 Sum_probs=209.0
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+... .|...+...++++ .+++++|.+ ..++++|||+|+..++.+++-.
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l~~----~la~~~~~~---------~~~~~~~gt~a~~~~~~~~~~~--------- 76 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKFEK----RFAALHNAP---------HAIGVGTGTDALAMSFKMLNIG--------- 76 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHHHH----HHHHHTTCS---------EEEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHcC--CcccChhHHHHHH----HHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC---------
Confidence 555555444332 3444555555654 566777764 4689999999998877765211
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
++..|+++..+|.++..+++..|+ +++.+|++. ++.+|+++|++++++. +.+|+ +++++|.+.|+
T Consensus 77 -~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~ 141 (374)
T 3uwc_A 77 -AGDEVITCANTFIASVGAIVQAGA---TPVLVDSEN--GYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADM 141 (374)
T ss_dssp -TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCT--TSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCH
T ss_pred -CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCH
Confidence 566788899999999999999999 999999873 5799999999988653 23444 67899999999
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCc--cccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
++|+++|++||+++|+|++|+.+..+.... . + ..+|.++.++| |+++.+..+|+++++++.... .+.. +
T Consensus 142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~--~--~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~-~~~~---~ 212 (374)
T 3uwc_A 142 PALAKIAKKHNLHIVEDACQTILGRINDKF--V--G-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAE-KLRL---Y 212 (374)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEE--T--T-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHH-HHHH---H
T ss_pred HHHHHHHHHcCCEEEEeCCCccCceeCCee--c--c-ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHH-HHHH---H
Confidence 999999999999999999998654432111 1 1 13699999977 999774447777777654432 2211 0
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC-Cc-c--------ce
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR-VS-P--------SA 416 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~-~~-p--------~~ 416 (506)
...... ..+. ....+..+....+..++.....++++++.++..++++++.+.|++.++ ++ | ..
T Consensus 213 ~~~~~~---~~~~----~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 285 (374)
T 3uwc_A 213 RNHGLI---NRDV----CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVF 285 (374)
T ss_dssp TBTTEE---ETTE----ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCC
T ss_pred HhcCcc---ccCc----cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceee
Confidence 000000 0000 001112223344555555556678889999999999999999999877 65 2 11
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee---E---------------------CCEEEEEE
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV---C---------------------GGIYAMRF 472 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~---------------------~g~~~lR~ 472 (506)
+.|..... ...++.+.|.++|+. +.+.. . .....+|+
T Consensus 286 ~~~~~~~~------------------~~~~l~~~L~~~gi~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl 346 (374)
T 3uwc_A 286 HIYVLRVK------------------YRDQLFQYLKDNGIE-VKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITL 346 (374)
T ss_dssp SSEEEEET------------------THHHHHHHHHHTTBC-CBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEE
T ss_pred EEEEEEcC------------------CHHHHHHHHHHCCCc-cccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEc
Confidence 22322211 024567777777873 33221 0 01268999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 473 AVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 473 ~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
++ ++.+|++||+++++.|+++.++
T Consensus 347 ~~-~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 347 PA-HPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp CC-CTTSCHHHHHHHHHHHHHHHHT
T ss_pred cC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 88 5778899999999999998754
No 78
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.89 E-value=8.3e-21 Score=200.62 Aligned_cols=324 Identities=12% Similarity=0.081 Sum_probs=218.7
Q ss_pred CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH-HHHHHhhcccCCCCeEEEeCC
Q 048643 120 VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR-DRVLNKIGRENISKLVVYGSD 198 (506)
Q Consensus 120 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar-~~~~~~~~~~~~~~~~v~~s~ 198 (506)
....|..+++..++++++.+|+.+..|.+.+. ...++|+|+++++..++.+.. . ++..|+++.
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~~-----------~gd~Vlv~~ 189 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANA-----DDIFLTDGASPGVHLMMQLLIRN-----------EKDGILVPI 189 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG-----GGEEEESSSHHHHHHHHHHHCCS-----------TTEEEEEEE
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC-----------CCCEEEEeC
Confidence 34567777788999999999999998876432 378999999999987776653 2 567899999
Q ss_pred CCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHH
Q 048643 199 QTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVA 275 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia 275 (506)
..|.++..+++.+|. +++.+|++++++|.+|+++|+++|++..+.|..+.+|+++.++|+||.+ +++++|+++|
T Consensus 190 p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la 266 (500)
T 3tcm_A 190 PQYPLYSASIALHGG---ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFC 266 (500)
T ss_dssp SCCTHHHHHHHHTTC---EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCcHhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHH
Confidence 999999999999999 9999999876678999999999999877667677788888999999999 4577888889
Q ss_pred HHhCCEEEeecccccccccC----ccchhhhcCC----CCCCee-EEcCccccC--CCCcceEEEEe--CchhHHhhhcC
Q 048643 276 KQFGIWVHVDAAYAGSACIC----PEFQHFIDGV----EGADSF-SLNAHKWFF--TTLDCCCLWVK--DPSALVSSLST 342 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~----~~~~~~~~gi----~~aDsi-~~~~hK~l~--~p~~~g~~~~r--~~~~l~~~~~~ 342 (506)
++||+++++|.+|+.+..-. .........+ ...+.+ ..+++|.++ ....+|++++. ++... ..+..
T Consensus 267 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~-~~l~~ 345 (500)
T 3tcm_A 267 KNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR-EQIYK 345 (500)
T ss_dssp HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHH-HHHHH
T ss_pred HHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHH-HHHHH
Confidence 99999999999998754421 1111111111 122234 348899983 33557888763 33332 22211
Q ss_pred C-ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc------------hhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 343 N-PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG------------VANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 343 ~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G------------~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
. ..++ ++ ..+..+++...+. .+...++.++..++++++.+.|++.
T Consensus 346 ~~~~~~-------------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 403 (500)
T 3tcm_A 346 IASVNL-------------------CS---NITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL 403 (500)
T ss_dssp HHHTTC-------------------CC---CHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHhccc-------------------CC---CHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 0011 01 1122222222221 1335666778888999999999999
Q ss_pred CCCc---c--ceEEE-eecCCCcccccccccchHHHHHH-------HHHH-HHHHHHhcCcEEEeeee---ECCEEEEEE
Q 048643 410 KRVS---P--SAVMD-KLKPKYENCHSQQLVTEEEAINE-------FNRE-LLESINASGKAYMTHAV---CGGIYAMRF 472 (506)
Q Consensus 410 ~~~~---p--~~v~f-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-l~~~l~~~g~~~~~~~~---~~g~~~lR~ 472 (506)
|+++ | ++++| ++..+. ...+. .... +.+.+.+.|+.++.+.. ..+..++|+
T Consensus 404 ~g~~~~~~~g~~~~~~~~~lp~------------~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRi 471 (500)
T 3tcm_A 404 EGITCNEAEGAMYVFPQICLPQ------------KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRC 471 (500)
T ss_dssp TTEECCCCCBTTEECCEECCCH------------HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEE
T ss_pred CCcEEecCCeEEEEeeeecCch------------hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEE
Confidence 8887 4 55554 232210 00000 0112 23445556765443322 245678999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 473 AVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 473 ~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+++ +++++|+++++.|.++.+++.+
T Consensus 472 s~~---~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 472 TIL---PQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp ESC---SCTTTHHHHHHHHHHHHHHHHH
T ss_pred EEC---CCHHHHHHHHHHHHHHHHHHHH
Confidence 996 5777999999999999887754
No 79
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.89 E-value=4.9e-21 Score=195.40 Aligned_cols=311 Identities=12% Similarity=0.094 Sum_probs=201.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.+..++...++|+. +++++|.+. . +++++||+|+..++.+++-. ++..|+++..+|.
T Consensus 33 ~~~~~~~~~~l~~~----la~~~~~~~--------~-i~~~sGt~al~~~l~~l~~~----------~gd~Vi~~~~~~~ 89 (388)
T 1b9h_A 33 WRMGGDEVNSFERE----FAAHHGAAH--------A-LAVTNGTHALELALQVMGVG----------PGTEVIVPAFTFI 89 (388)
T ss_dssp BTTTCSHHHHHHHH----HHHHTTCSE--------E-EEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCT
T ss_pred eecCCHHHHHHHHH----HHHHhCCCe--------E-EEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCccH
Confidence 34445666666655 566667652 3 45555699998887765211 5567888999999
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
++..+++..|+ +++.+|++++ ++.+|+++|+++|++. +.+|+ +++++|.+.|+++|+++|++||+++
T Consensus 90 ~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~la~~~~~~l 156 (388)
T 1b9h_A 90 SSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADMDALAKISADTGVPL 156 (388)
T ss_dssp HHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCHHHHHHHHHHcCCEE
Confidence 99999999999 9999999863 4799999999998643 23444 7788999999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh--HHhhhcCCccccCCccccCCCccCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA--LVSSLSTNPEYLKNKATESKQVVDY 360 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~--l~~~~~~~~~yl~~~~~~~~~~~~~ 360 (506)
|+|++|+.+....... +..+..++..+++.||++..+ .+|++++++... +....... .+ .... ....+
T Consensus 157 i~D~a~~~g~~~~~~~---~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~-~~-~~~~----~~~~~ 226 (388)
T 1b9h_A 157 LQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRH-SC-GRPR----DDRRY 226 (388)
T ss_dssp CEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHT-BT-TCCT----TCSSC
T ss_pred EEecchhcCCccCCee---cccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHH-hC-CCCc----cCccc
Confidence 9999998554332111 111225778888899999765 468887776533 22221111 00 0000 00001
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---------c---ceEEEeecCCCccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---------P---SAVMDKLKPKYENC 428 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---------p---~~v~f~~~~~~~~~ 428 (506)
.......+.+...+.++..+. +.+.+++.+++..++++++.+.|+++|+++ + ++++|++.+..
T Consensus 227 ~~~~~g~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 301 (388)
T 1b9h_A 227 FHKIAGSNMRLNEFSASVLRA--QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT--- 301 (388)
T ss_dssp CCCSCCCBCBCBHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC---
T ss_pred eeecccccCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC---
Confidence 000111112233444444433 345677888889999999999999887765 1 35666664310
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---C--------------------------CEEEEEEEecCCCC
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC---G--------------------------GIYAMRFAVGATLT 479 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~--------------------------g~~~lR~~~~~~~t 479 (506)
.....++.+.|.++|+..-..... . ....+|+++. +.+
T Consensus 302 ------------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~ 368 (388)
T 1b9h_A 302 ------------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHR-VLL 368 (388)
T ss_dssp ------------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGG-GGG
T ss_pred ------------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCC-CCC
Confidence 012356777777788743221110 0 0236999984 566
Q ss_pred -CHHHHHHHHHHHHHHHHH
Q 048643 480 -EERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 480 -t~edi~~li~~l~~~~~~ 497 (506)
|++||+++++.|+++.++
T Consensus 369 ~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 369 AGEPELHATAEIIADAVAR 387 (388)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 899999999999988654
No 80
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.88 E-value=7.9e-22 Score=201.17 Aligned_cols=321 Identities=10% Similarity=0.060 Sum_probs=214.2
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+...++.....|...+...++++.+.+|+.+.+|.+.+. . ..++|+||++++..++.+...
T Consensus 47 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~-------- 113 (386)
T 1u08_A 47 YLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA-----DSDITVTAGATEALYAAITALVR-------- 113 (386)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT-----TTTEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCCEEEcCChHHHHHHHHHHhCC--------
Confidence 44555555544323345555567899999999999999875331 3 689999999999887776532
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|.++..+++..|. +++.+|.+.+ ++.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 114 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~ 180 (386)
T 1u08_A 114 ---NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSATVW 180 (386)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEeecCcc-cCcCCHHHHHHhhccc------CEEEEEeCCCCCCCccC
Confidence 456788888999999999999999 9999998753 4789999999988532 45777888999999986
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
| +++|+++|++||+|+++|++|+.+..-....... +.+....|.+..++||+++.| ..+|++++++ . +.+.+
T Consensus 181 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~-~~~~l 258 (386)
T 1u08_A 181 QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA-P-ISAEI 258 (386)
T ss_dssp CHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH-H-HHHHH
T ss_pred CHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH-H-HHHHH
Confidence 5 7999999999999999999998754321111111 000125788999999999843 4589888763 2 22222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--- 414 (506)
.....+.. ++ .+ ......+..+|+. +.++++++.++..++++++.+.|++. +++ |
T Consensus 259 ~~~~~~~~--------------~~--~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 319 (386)
T 1u08_A 259 RKVHQYLT--------------FS--VN-TPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEILPCEGT 319 (386)
T ss_dssp HHHHHHHT--------------SS--CC-HHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBS
T ss_pred HHHHHhhc--------------cC--CC-hHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCce
Confidence 21100000 00 00 0011222333433 35678888899999999999999987 676 3
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
.++++++.... . ....++.+.+. +.|+.......+ .+..++|+++. +++++|+++++
T Consensus 320 ~~~~~~~~~~~--------~-------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~---~~~~~i~~~~~ 381 (386)
T 1u08_A 320 YFLLVDYSAVS--------T-------LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA---KKESTLLAAAE 381 (386)
T ss_dssp SEEEEECTTTC--------C-------SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC---SCHHHHHHHHH
T ss_pred EEEEEecCCCC--------C-------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc---CCHHHHHHHHH
Confidence 45666664310 0 01245666665 457644333222 24578999995 37889999998
Q ss_pred HHHH
Q 048643 490 MVQE 493 (506)
Q Consensus 490 ~l~~ 493 (506)
.|++
T Consensus 382 ~l~~ 385 (386)
T 1u08_A 382 RLRQ 385 (386)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8864
No 81
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.88 E-value=3.7e-21 Score=199.00 Aligned_cols=332 Identities=10% Similarity=0.047 Sum_probs=218.7
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 048643 106 AGFLGEMLSSGFNVV---GFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVL 181 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~ 181 (506)
+..+.+.+...+... ...|...+...++++.+.+|+.+.+|++ .+. ...++|+||++++..++.+...
T Consensus 60 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-----~~v~~t~G~~~al~~~~~~l~~--- 131 (425)
T 1vp4_A 60 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDE-----DNLIFTVGSQQALDLIGKLFLD--- 131 (425)
T ss_dssp HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCG-----GGEEEEEHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCc-----ccEEEeccHHHHHHHHHHHhCC---
Confidence 344555555444332 1345444567899999999998888854 221 2789999999998877766532
Q ss_pred HhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc--CCccEEE-EEecc
Q 048643 182 NKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA--GLVPLFL-CATIG 258 (506)
Q Consensus 182 ~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--g~~p~~V-v~t~g 258 (506)
++..|++...+|.++..+++..|. +++.+|.++ + .+|+++|++++++..++ +..+.+| +.+.+
T Consensus 132 --------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~ 197 (425)
T 1vp4_A 132 --------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLED--D-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNF 197 (425)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSS
T ss_pred --------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHHhhhhcccCCCceEEEECCCC
Confidence 456788888999999999999999 999999875 3 39999999999863221 1134465 56788
Q ss_pred CCCCCcccC---hhHHHHHHHHhCCEEEeecccccccccCc---cchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeC
Q 048643 259 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP---EFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD 332 (506)
Q Consensus 259 tt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~---~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~ 332 (506)
+|+||.+-| +++|+++|++||+|+++|++|+.+..-.. ..... . ....+.+..+++|+++....+|+++++
T Consensus 198 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~-~~~~~i~~~s~sK~~~~G~r~G~~~~~- 274 (425)
T 1vp4_A 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKI-G-GPERVVLLNTFSKVLAPGLRIGMVAGS- 274 (425)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHH-H-CTTTEEEEEESTTTTCGGGCEEEEECC-
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHh-C-CCCCEEEEeccccccccccceEEEeeC-
Confidence 999999965 67899999999999999999987543211 11111 1 123456778999999943457988876
Q ss_pred chhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc----hhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 333 PSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG----VANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G----~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
++. .+.+....... +. + ...+..+++...+. .+.++++.++..++++++.+.|++
T Consensus 275 ~~~-~~~l~~~~~~~----------------~~--~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 333 (425)
T 1vp4_A 275 KEF-IRKIVQAKQSA----------------DL--C--SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEE 333 (425)
T ss_dssp HHH-HHHHHHHHHHH----------------HS--S--CCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHhhhh----------------cC--C--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22221100000 00 0 12333444444442 345677777888899999999987
Q ss_pred C-C---CCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEe
Q 048643 409 D-K---RVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC----GGIYAMRFAV 474 (506)
Q Consensus 409 ~-~---~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~ 474 (506)
. | +++ | .++.+++.... ...++.+.|.++|+.+..+..+ .+..++|+++
T Consensus 334 ~~~~~~g~~~~~~~~g~~~~~~~~~~~-----------------~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~ 396 (425)
T 1vp4_A 334 YFSDIPGVKWVKSEGGLFIWLTLPEGF-----------------DTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSF 396 (425)
T ss_dssp HSTTSTTCEECCCSBSSEEEEECCTTC-----------------CTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEEC
T ss_pred hCCCCCceEEecCCccEEEEEEcCCCC-----------------CHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEe
Confidence 3 5 465 4 56666664210 0134566666677644333222 1457899999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHccC
Q 048643 475 GATLTEERHVMVAWTMVQEQLEAFLTTN 502 (506)
Q Consensus 475 ~~~~tt~edi~~li~~l~~~~~~l~~~~ 502 (506)
... ++++|+++++.|+++.+++.++.
T Consensus 397 ~~~--~~e~i~~~l~~l~~~l~~~~~~~ 422 (425)
T 1vp4_A 397 CLP--PDEKIVEGIKRLREVVLEYGKEK 422 (425)
T ss_dssp SSS--CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHhhc
Confidence 643 78899999999999988876654
No 82
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.88 E-value=8.8e-23 Score=212.63 Aligned_cols=286 Identities=12% Similarity=0.036 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+++++ +|.+. ..++++|+|+||..++.++.. ++..|+++..+|.++..++...
T Consensus 57 ~~~~~~~~~la~-~g~~~--------~v~~~~G~t~a~~~~~~a~~~-----------~gd~Vlv~~~~h~s~~~~~~~~ 116 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDYD--------GYFLVNGTTSGILSVIQSFSQ-----------KKGDILMARNVHKSVLHALDIS 116 (446)
T ss_dssp SHHHHHHHHHCS-CTTEE--------EEEESSHHHHHHHHHHHTTTT-----------SSSCEEECTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHh-cCCCc--------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEecCccHHHHHHHHHc
Confidence 344667789999 99863 568999999999988877633 5667889999999999999999
Q ss_pred CCCCCCeEEEecCCCCC----cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 212 GIDLKNFRAIKTTKSSS----YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 212 G~g~~~v~~v~~~~~~~----~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
|. +++.++...+++ +.+|+++| +.++ +.+|+++. +|++|.+.|+++|+++|++||+|+|+|+|
T Consensus 117 G~---~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea 183 (446)
T 2x3l_A 117 QQ---EGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEA 183 (446)
T ss_dssp TC---CEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECT
T ss_pred CC---eEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcch
Confidence 99 999999822223 57899887 3222 34677777 66799999999999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
|++.+.+.+. ...... .++|.++.++||+++.+.++|++++++...-...+.....+.. ..
T Consensus 184 ~~~~~~f~~~-~~~~~~-~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~-----------------~~ 244 (446)
T 2x3l_A 184 HGAHFGLQGF-PDSTLN-YQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYFQ-----------------TS 244 (446)
T ss_dssp TCTTTTSTTS-CCCGGG-GTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHHS-----------------CS
T ss_pred hhhhhccCCC-CCChHH-cCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHHc-----------------CC
Confidence 9883323221 100111 1589999999999999999999999875311111110000000 01
Q ss_pred CCCCC-chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHH
Q 048643 368 SRRFR-SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 368 sr~~~-al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
+.... ...+..+++.+...+.+++.++..++++++++. +++ + ..+.|.+.+..
T Consensus 245 s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~~--------------- 304 (446)
T 2x3l_A 245 SPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGFT--------------- 304 (446)
T ss_dssp SCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTSC---------------
T ss_pred CchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCcC---------------
Confidence 11111 123444555555555555778888888888887 454 2 45666654210
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
..++.+.|.++|+. +.. .+..++|++++ ..++++++ +++++|+++.+++
T Consensus 305 ---~~~l~~~L~~~GI~-v~~---~g~~~iRi~~~-~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 305 ---GHDIQNWFMNAHIY-LEL---ADDYQALAILP-LWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp ---HHHHHHHHHHTTEE-ESE---ECSSCEEEECC-CCCTTCCC-CHHHHHHHHHTCC
T ss_pred ---HHHHHHHHHHCCCE-EEe---cCCCEEEEEee-cCCCHHHH-HHHHHHHHHHHhh
Confidence 24566777777764 331 13368999995 55677799 9999999987654
No 83
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.88 E-value=4.6e-22 Score=204.81 Aligned_cols=327 Identities=11% Similarity=0.040 Sum_probs=217.6
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+...++.....|...+...++++.+.+|+.+.+|.+.+. . ..++|+||++|+..++.++..
T Consensus 42 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~t~g~~~al~~~~~~~~~-------- 108 (411)
T 2o0r_A 42 KMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP-----ETEVLVTVGATEAIAAAVLGLVE-------- 108 (411)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEEEHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-----CceEEEeCCHHHHHHHHHHHhcC--------
Confidence 34455554444323345555567899999999999999975331 2 589999999999888776532
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKS-SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|.++..+++..|. +++.+|.+++ +++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 109 ---~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~~ 176 (411)
T 2o0r_A 109 ---PGSEVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGAV 176 (411)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred ---CCCEEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCCC
Confidence 556788888999999999999999 9999998643 24679999999998642 4477788899999999
Q ss_pred cC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhh
Q 048643 266 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSS 339 (506)
Q Consensus 266 dp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 339 (506)
-| +++|+++|++||+++++|++|+++.......... +.+....|.++.++||+++.| ..+|+++++ +.. .+.
T Consensus 177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~-~~~ 254 (411)
T 2o0r_A 177 LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP-AEL-IAG 254 (411)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC-HHH-HHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC-HHH-HHH
Confidence 55 6999999999999999999998755321111111 111235789999999999743 458988875 332 222
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-- 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-- 414 (506)
+.....+.. ++ .+ ......+..+|+. +.++++++.++..++++++.+.|++. +++ |
T Consensus 255 l~~~~~~~~--------------~~--~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 315 (411)
T 2o0r_A 255 VRAAKQYLS--------------YV--GG-APFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVHDSYG 315 (411)
T ss_dssp HHHHHHHHT--------------SC--CC-TTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCCB
T ss_pred HHHHHhhcc--------------CC--CC-hHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecCCCe
Confidence 321111100 00 00 1111233344443 36678888899999999999999886 666 3
Q ss_pred c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE---C----------CEEEEEEEecCCCC
Q 048643 415 S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC---G----------GIYAMRFAVGATLT 479 (506)
Q Consensus 415 ~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~---~----------g~~~lR~~~~~~~t 479 (506)
+ ++++++.... . ....++.+++. +.|+....+..+ . +..++|+++.+
T Consensus 316 g~~~~~~~~~~~--------~-------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~--- 377 (411)
T 2o0r_A 316 TYFLCADPRPLG--------Y-------DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK--- 377 (411)
T ss_dssp SSEEEEECGGGT--------C-------CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS---
T ss_pred eEEEEEecCCCC--------C-------CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC---
Confidence 3 5666664310 0 00245666665 457654333222 1 35689999853
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 480 t~edi~~li~~l~~~~~~l 498 (506)
++++|+++++.|+++.++.
T Consensus 378 ~~e~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 378 RDDTLDEAIRRLSVLAERP 396 (411)
T ss_dssp CHHHHHHHHHHHGGGGC--
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 7889999999998876544
No 84
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.88 E-value=3.3e-22 Score=203.12 Aligned_cols=305 Identities=12% Similarity=0.092 Sum_probs=203.3
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT 200 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~ 200 (506)
...|...++..++++.+.+|+. +.+.+ ..++++||++|+..++.+... ++..|+++..+
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~---~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~ 114 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYT---GVKPE-------QILQTNGATGANLLVLYSLIE-----------PGDHVISLYPT 114 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSS---SCCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEEESS
T ss_pred CcCCCCCCChHHHHHHHHHHhc---cCChh-------hEEEcCChHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence 3445555556777766555432 34443 789999999999888876533 56678888999
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
|.++..+++..|. +++.+|++.++++.+|+++|++++++. +.+|+++.+++++|.+-| +++|+++|++
T Consensus 115 ~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~la~~ 185 (375)
T 3op7_A 115 YQQLYDIPKSLGA---EVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEIASE 185 (375)
T ss_dssp CTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred chhHHHHHHHcCC---EEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999 999999875445789999999998743 337788889999999999 9999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
||+|+++|++|+++... ....... ....+.+..+++|+++. ...+|++++ +++. .+.+.....+..
T Consensus 186 ~~~~li~De~~~~~~~~--~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l-~~~~~~~~~~~~-------- 252 (375)
T 3op7_A 186 VGAYILSDEVYRSFSEL--DVPSIIE-VYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQV-TDILRDYRDYTM-------- 252 (375)
T ss_dssp TTCEEEEECCSCCCSSS--CCCCHHH-HCTTEEEEEESSSSSSCGGGCCEEEEC-CHHH-HHHHTTTGGGTT--------
T ss_pred cCCEEEEEccccccccc--CCCchhh-hcCCEEEEeEChhhcCCcccceEEEEe-CHHH-HHHHHHHHhhhc--------
Confidence 99999999999875432 1111111 11345677789999984 456788877 4443 333322111110
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEeecCCCccc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDKLKPKYENC 428 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~ 428 (506)
. + ...+..+++...+ ..+.++++.++..++++++.+.|++.++++ | ..+.+.+....
T Consensus 253 --------~-~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 317 (375)
T 3op7_A 253 --------I-C---AGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM--- 317 (375)
T ss_dssp --------S-C---CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS---
T ss_pred --------c-C---CCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC---
Confidence 0 0 1222223333322 234566677777889999999999888776 3 23334443210
Q ss_pred ccccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 429 HSQQLVTEEEAINEFNRELLESI-NASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+ ..++.+++ .+.|+....+..+....++|++++. ++++|+++++.|.++.+++.+
T Consensus 318 -------~-------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~---~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 318 -------P-------MEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC---EQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp -------C-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS---CHHHHHHHHHHHHHHHGGGC-
T ss_pred -------C-------HHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHHhh
Confidence 0 23455555 4567754444334445789999854 347999999999998876543
No 85
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.88 E-value=1.4e-21 Score=201.27 Aligned_cols=321 Identities=12% Similarity=0.065 Sum_probs=208.9
Q ss_pred ccccChhhHHHHHHHHHHHHHH------cCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEe
Q 048643 123 NWISSPAATELENIVMDWLGQM------LKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYG 196 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l------~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~ 196 (506)
.|.......++++.+.+|+.+. .|++.+ ....++|+||++++..++.+... ++..|++
T Consensus 70 ~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~-----~~~v~~~~g~~~al~~~~~~l~~-----------~gd~vl~ 133 (416)
T 1bw0_A 70 GYFPTVGSPEAREAVATWWRNSFVHKEELKSTIV-----KDNVVLCSGGSHGILMAITAICD-----------AGDYALV 133 (416)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCC-----GGGEEEESHHHHHHHHHHHHHCC-----------TTCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCC-----cceEEEeCChHHHHHHHHHHhCC-----------CCCEEEE
Confidence 3444446788999999998843 343221 12789999999999877776532 4567888
Q ss_pred CCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHH
Q 048643 197 SDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCD 273 (506)
Q Consensus 197 s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ 273 (506)
+..+|.++..+++..|. +++.+|+++++++.+|+++|++++++. +.+|+++.++|++|.+.| +++|++
T Consensus 134 ~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~ 204 (416)
T 1bw0_A 134 PQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSRKHVEDIVR 204 (416)
T ss_dssp EESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred cCCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCCCcccCHHHHHHHHH
Confidence 88999999999999999 999999875434689999999988643 346777889999999988 999999
Q ss_pred HHHHhCCEEEeecccccccccCc----cchhhhcCCCCC--CeeEEcCccccCCC-CcceEEEEeCc-hhHHhhhcCCcc
Q 048643 274 VAKQFGIWVHVDAAYAGSACICP----EFQHFIDGVEGA--DSFSLNAHKWFFTT-LDCCCLWVKDP-SALVSSLSTNPE 345 (506)
Q Consensus 274 ia~~~g~~lhVDaA~gg~~~~~~----~~~~~~~gi~~a--Dsi~~~~hK~l~~p-~~~g~~~~r~~-~~l~~~~~~~~~ 345 (506)
+|++||+++++|++|+.+..-.. .+.. +..+... +.++.+++|+++.| ..+|+++++++ ..+.........
T Consensus 205 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~ 283 (416)
T 1bw0_A 205 LAEELRLPLFSDEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKR 283 (416)
T ss_dssp HHHHHTCCEEEECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHH
T ss_pred HHHHcCCEEEEEccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHH
Confidence 99999999999999987432111 1111 1222211 24566899998765 56899988775 221111000000
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEE
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMD 419 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f 419 (506)
+.. . +. .........+..+|+..+.++++++.++..++++++.+.|++.|+++ | ..+.+
T Consensus 284 ~~~-~-------------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 348 (416)
T 1bw0_A 284 VGM-L-------------VC-GPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMS 348 (416)
T ss_dssp HHH-H-------------HT-CSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEE
T ss_pred Hhc-c-------------cc-CCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEE
Confidence 000 0 00 00001112223334433467788999999999999999999888876 4 45556
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
++..... . . .....++.+.+. +.|+.+..+..+....++|+++. +++++|+++++.|.++.++.
T Consensus 349 ~~~~~~~-------~-~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~---~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 349 RIDLEKY-------R-D----IKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp EECGGGB-------S-S----CCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHc-------C-C----CCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 6532100 0 0 001234556653 56775443333333468999984 57889999999999887764
Q ss_pred H
Q 048643 499 L 499 (506)
Q Consensus 499 ~ 499 (506)
.
T Consensus 414 ~ 414 (416)
T 1bw0_A 414 A 414 (416)
T ss_dssp B
T ss_pred h
Confidence 3
No 86
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.88 E-value=1.3e-21 Score=199.35 Aligned_cols=315 Identities=11% Similarity=0.054 Sum_probs=206.3
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+.. ...|...+...++++. +++++|.+.+ ..++|+||++++..++.++..
T Consensus 42 ~v~~a~~~~~~~-~~~y~~~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~a~~~~~~~~~~--------- 100 (381)
T 1v2d_A 42 FLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG--------- 100 (381)
T ss_dssp HHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCHHHHHH----HHHhcCCChh-------hEEEcCChHHHHHHHHHHhCC---------
Confidence 344455544543 2344444445666655 5555777654 689999999999888877632
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTT--KSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|.++..+++..|. +++.+|.+ ++ ++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 101 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~ 168 (381)
T 1v2d_A 101 --PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPE-GFRLDLSALEKALTPR------TRALLLNTPMNPTGLV 168 (381)
T ss_dssp --TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETT-EEECCHHHHHTTCCTT------EEEEEEESSCTTTCCC
T ss_pred --CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCc-cCCcCHHHHHHhcCcC------CEEEEECCCCCCCCCc
Confidence 556788888999999999999999 99999986 32 4789999999988532 4578888999999998
Q ss_pred cC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhc
Q 048643 266 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLS 341 (506)
Q Consensus 266 dp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~ 341 (506)
-| +++|+++|++||+|+|+|++|+++.. .........-....|.++.++||+++.| +.+|++++++. .. +.+.
T Consensus 169 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~~~ 245 (381)
T 1v2d_A 169 FGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FM-PRLA 245 (381)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-TH-HHHH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HH-HHHH
Confidence 65 89999999999999999999987654 2111111100236899999999999744 44899888543 22 2221
Q ss_pred CCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---
Q 048643 342 TNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P--- 414 (506)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--- 414 (506)
....+.. ++ .+ ......+..+|+... .++++++.++..++++++.+.|++. +++ |
T Consensus 246 ~~~~~~~--------------~~--~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 307 (381)
T 1v2d_A 246 GMRQWTS--------------FS--AP-TPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVPEGT 307 (381)
T ss_dssp HHHHHHT--------------SS--CC-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCSBS
T ss_pred HHHhhcc--------------cC--CC-cHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecCCCcc
Confidence 1000000 00 00 001112223333221 5678889999999999999999985 777 3
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC----CEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG----GIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
.++++++.+. + +.+.+.+.|+.......+. +..++|+++.. ++++|+++++.
T Consensus 308 ~~~~~~~~~~----------------~-----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~---~~~~i~~~~~~ 363 (381)
T 1v2d_A 308 YFLMAELPGW----------------D-----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK---TEEELHLALER 363 (381)
T ss_dssp SEEEEECTTC----------------C-----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS---CHHHHHHHHHH
T ss_pred eEEEEecChH----------------h-----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC---CHHHHHHHHHH
Confidence 3455554321 1 4445556676543332221 35689999854 78899999999
Q ss_pred HHHHHHHHHc
Q 048643 491 VQEQLEAFLT 500 (506)
Q Consensus 491 l~~~~~~l~~ 500 (506)
|.++.++...
T Consensus 364 l~~~l~~~r~ 373 (381)
T 1v2d_A 364 LGRVVNSPRE 373 (381)
T ss_dssp HHHHC-----
T ss_pred HHHHHhhccc
Confidence 9998776544
No 87
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.88 E-value=1.6e-20 Score=188.96 Aligned_cols=286 Identities=10% Similarity=0.055 Sum_probs=201.3
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGID 214 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g 214 (506)
.++.+++++++|.+.+ ..++|+||++++..++.+... ++..|+++..+|.++...++..|.
T Consensus 54 ~~l~~~la~~~~~~~~-------~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~g~- 114 (354)
T 3ly1_A 54 LMLGNKLAAHHQVEAP-------SILLTAGSSEGIRAAIEAYAS-----------LEAQLVIPELTYGDGEHFAKIAGM- 114 (354)
T ss_dssp HHHHHHHHHHTTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEESSSCTHHHHHHHHTTC-
T ss_pred HHHHHHHHHHhCCChH-------HEEEeCChHHHHHHHHHHHhC-----------CCCeEEECCCCchHHHHHHHHcCC-
Confidence 4566788888888655 789999999999887776532 556788888999999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH--hCCEEEeeccccccc
Q 048643 215 LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSA 292 (506)
Q Consensus 215 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~--~g~~lhVDaA~gg~~ 292 (506)
+++.+|.++ ++.+|+++|++++++. ..+.+|+++.++|++|.+-|++++.++|+. ||+++++|++|+.+.
T Consensus 115 --~~~~~~~~~--~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~ 186 (354)
T 3ly1_A 115 --KVTKVKMLD--NWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFV 186 (354)
T ss_dssp --EEEEECCCT--TSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGC
T ss_pred --EEEEecCCC--CCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhc
Confidence 999999875 4799999999999731 124578888999999999999888888887 999999999998654
Q ss_pred ccCc--cchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCC
Q 048643 293 CICP--EFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 293 ~~~~--~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
.-.. ............+.+..++||+++ .+..+|++++. +.. .+.+.....+ +
T Consensus 187 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~-~~~~~~~~~~----------------~------ 242 (354)
T 3ly1_A 187 NDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH-PTV-IALMGRYVAG----------------E------ 242 (354)
T ss_dssp CCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC-HHH-HHHHGGGTTC----------------S------
T ss_pred cccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC-HHH-HHHHHHhcCC----------------C------
Confidence 3211 111112211134577889999997 55678888773 332 2333211000 0
Q ss_pred CCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 370 RFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 370 ~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
....+..+++...+. .+.++++.++..++++++.+.|++. +++ | +++.+++...
T Consensus 243 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~------------------- 302 (354)
T 3ly1_A 243 KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYLPSEGNFVFHQLVVP------------------- 302 (354)
T ss_dssp CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCCSSEEEEECSSC-------------------
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeECCCCceEEEEECCCC-------------------
Confidence 112333444444442 2567888889999999999999887 676 3 6666665432
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
..++.+.|.+.|+. +.+....+..++|+++. +++++++++++|+++.+
T Consensus 303 ~~~~~~~l~~~gi~-v~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 303 LKDYQTHMADAGVL-IGRAFPPADNWCRISLG----TPQEMQWVADTMREFRK 350 (354)
T ss_dssp HHHHHHHHHHTTEE-CCCCCTTCTTEEEEECC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEE-EeecCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence 24566777777864 44222234678999974 67899999999998865
No 88
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.88 E-value=1.5e-21 Score=201.45 Aligned_cols=315 Identities=11% Similarity=0.062 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.++..++.+++++++|.+ ..+++++||+|+..++.+++-. ++..|+++..+|.++..+++.
T Consensus 41 ~~l~~~l~~~la~~~g~~---------~~i~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~~~~~~ 101 (418)
T 2c81_A 41 ESMERKFAKAFADFNGVP---------YCVPTTSGSTALMLALEALGIG----------EGDEVIVPSLTWIATATAVLN 101 (418)
T ss_dssp CCHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCccHhHHHHHHH
Confidence 344556667888888876 3577888899998887765211 556788899999999999999
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|. +++.+|++++ ++.+|+++|++++++. +.+|+++ +++|.+.|+++|+++|++||+++|+|++|+.
T Consensus 102 ~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~ 168 (418)
T 2c81_A 102 VNA---LPVFVDVEAD-TYCIDPQLIKSAITDK------TKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSH 168 (418)
T ss_dssp TTC---EEEEECBCTT-TCSBCHHHHGGGCCTT------EEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCT
T ss_pred cCC---EEEEEecCCC-CCCcCHHHHHHhhCCC------CeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccc
Confidence 999 9999998752 5799999999988643 3355543 5789999999999999999999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc-cCCCccCCCC-----cc
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT-ESKQVVDYKD-----WQ 364 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~~~~~-----~~ 364 (506)
+..+... . +..+..++.+++++||+++.+ .+|+++++++.... .+.....+-..... .......+.+ ..
T Consensus 169 ~~~~~~~--~-~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (418)
T 2c81_A 169 GSVWNNQ--R-AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFE-LIQQLRADSRVYCDDSSELMHGDMQLVKKGDI 243 (418)
T ss_dssp TCEETTE--E-TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHH-HHHHHHBTTEEECSCGGGCCTTCBSEEECCSS
T ss_pred cCccCCE--e-cccccceEEEeccCCcccCCC-CeEEEEECCHHHHH-HHHHHHHhCccccccccccccchhhccccccc
Confidence 6532211 1 111224666677779999874 67777766554322 22110000000000 0000000110 01
Q ss_pred ccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-c-------eEEEeecCCCccccccc
Q 048643 365 ITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-S-------AVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 365 ~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-~-------~v~f~~~~~~~~~~~~~ 432 (506)
+....+...+.....+ ...++++++.++..++++++.+.|+++|+++ | . ++++++.+...
T Consensus 244 ~g~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 315 (418)
T 2c81_A 244 QGSNYCLSEFQSAILL--DQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKF------ 315 (418)
T ss_dssp CCCBCCCCHHHHHHHH--HHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGT------
T ss_pred cCcCCCcCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccccc------
Confidence 1112223333333332 2346678888999999999999999887776 2 3 23355532000
Q ss_pred ccchHHHHHHHHHHHHHHHHhc-CcEE--Eeeee--E------C--------------------C---------EEEEEE
Q 048643 433 LVTEEEAINEFNRELLESINAS-GKAY--MTHAV--C------G--------------------G---------IYAMRF 472 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~-g~~~--~~~~~--~------~--------------------g---------~~~lR~ 472 (506)
. .....++.+.|.++ |+.. +.... . . + ...+|+
T Consensus 316 ---~----~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl 388 (418)
T 2c81_A 316 ---G----GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVI 388 (418)
T ss_dssp ---T----TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEE
T ss_pred ---c----ccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEe
Confidence 0 00124566777777 7640 22211 0 0 1 258999
Q ss_pred EecCCCC-CHHHHHHHHHHHHHHHHHH
Q 048643 473 AVGATLT-EERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 473 ~~~~~~t-t~edi~~li~~l~~~~~~l 498 (506)
++ ++.+ |++||++++++|+++.+++
T Consensus 389 ~~-~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 389 HH-AILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp EG-GGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred cC-CccCCCHHHHHHHHHHHHHHHHhh
Confidence 98 5777 8999999999999987754
No 89
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.88 E-value=2.1e-20 Score=189.54 Aligned_cols=288 Identities=13% Similarity=0.037 Sum_probs=202.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..++++.+.+|+.+.+|++.+. ...++|+|+++++..++.+... ++..|+++..+|.++..+++
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~ 134 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVTR-----DNLWAANGSNEILQQLLQAFGG-----------PGRTALGFQPSYSMHPILAK 134 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCS-----------TTCEEEEEESSCTHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccCCCCh-----HhEEECCChHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHH
Confidence 3689999999999987765321 2688999999888777665532 45678888899999999999
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
..|. +++.+|.+. ++.+|+++|++++++. .+.+|+++.+++++|.+.|++++.++|+.+++++++|++|+
T Consensus 135 ~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~ 204 (369)
T 3cq5_A 135 GTHT---EFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYA 204 (369)
T ss_dssp HTTC---EEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTG
T ss_pred HcCC---EEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCch
Confidence 9999 999999763 4689999999999762 13367778999999999999999999999999999999998
Q ss_pred cccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCC
Q 048643 290 GSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
.+... .............+.+..++||+++.| +.+|++++++. . .+.+.....+ ++
T Consensus 205 ~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~-~~~l~~~~~~----------------~~---- 261 (369)
T 3cq5_A 205 EFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-F-IDAVMLVRLP----------------YH---- 261 (369)
T ss_dssp GGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH-H-HHHHHTTSCT----------------TC----
T ss_pred hhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHH-H-HHHHHHcCCC----------------CC----
Confidence 76532 111111121111457788999999744 45798888643 2 2333211100 00
Q ss_pred CCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHH
Q 048643 369 RRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINE 442 (506)
Q Consensus 369 r~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 442 (506)
...+..+++...+. .+.++++.++..++++++.+.|++. +++ | +++.+++...
T Consensus 262 --~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------------ 320 (369)
T 3cq5_A 262 --LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVVPSESNFVFFGDFSD------------------ 320 (369)
T ss_dssp --SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEECCSSSEEEEECCSS------------------
T ss_pred --CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCCCCeEEEEECCCC------------------
Confidence 12334444444442 2457778888889999999999874 676 3 6666665311
Q ss_pred HHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 443 FNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 443 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.|.+.|+. +.+. ....++|+++. +++|+++++++|+++.
T Consensus 321 -~~~l~~~l~~~gi~-v~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 321 -QHAAWQAFLDRGVL-IRDV--GIAGHLRTTIG----VPEENDAFLDAAAEII 365 (369)
T ss_dssp -HHHHHHHHHHTTEE-CBCC--SCTTEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCEE-EEEC--CCCCeEEEEeC----CHHHHHHHHHHHHHHH
Confidence 24566667677764 4443 22468999984 6789999999998875
No 90
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.88 E-value=2.5e-20 Score=194.22 Aligned_cols=330 Identities=13% Similarity=0.097 Sum_probs=217.3
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 106 AGFLGEMLSSGFNVV---GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
+..+.+.+...+... ...|...++..++++.+.+|+.+.+|.+ +. ...++|+|+++++..++.+..+
T Consensus 93 ~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~-----~~v~~t~G~~~al~~~~~~l~~---- 162 (448)
T 3aow_A 93 KEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QD-----NDIMITSGSQQALDLIGRVFLN---- 162 (448)
T ss_dssp HHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TT-----SEEEEESSHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Ch-----hhEEEeCcHHHHHHHHHHHHcC----
Confidence 444555554444332 1345555567899999999998888984 21 2789999999999887776533
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE-EEeccCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFL-CATIGTTA 261 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~V-v~t~gtt~ 261 (506)
++..|++...+|.++..+++..|. +++.||.++ + .+|+++|+++++.+...+..+.+| +...++|+
T Consensus 163 -------~Gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NP 229 (448)
T 3aow_A 163 -------PGDIVVVEAPTYLAALQAFNFYEP---QYIQIPLDD--E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNP 229 (448)
T ss_dssp -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTT
T ss_pred -------CCCEEEEeCCChHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCC
Confidence 556788888999999999999999 999999875 2 399999999997432222345565 56788999
Q ss_pred CCcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC--CCCCeeEEcCccccCCCCcceEEEEeCchhH
Q 048643 262 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSAL 336 (506)
Q Consensus 262 tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 336 (506)
+|.+-| +++|+++|++||+++++|++|+.+..-...... +..+ ...+.+..+++|+++..+.+|++++++ ..
T Consensus 230 tG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~-~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~-~l- 306 (448)
T 3aow_A 230 AGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKK-IKALDNEGRVIYLGTFSKILAPGFRIGWMVGDP-GI- 306 (448)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCC-TGGGCTTSCEEEEEESTTTTCGGGCCEEEEECH-HH-
T ss_pred cCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcC-HHhcCCCCCEEEEccchhhccccccEEEEEeCH-HH-
Confidence 999865 679999999999999999999875432111111 1111 134556778899998334589988863 32
Q ss_pred HhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc----hhHHHHHHHHHHHHHHHHHHHHHc-CC-
Q 048643 337 VSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG----VANLRHFLRSHVNMAKLFERLVAS-DK- 410 (506)
Q Consensus 337 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G----~~g~~~~i~~~~~~a~~l~~~l~~-~~- 410 (506)
.+.+.....+. +. ++ ..+..+++...+. .+.++++.++..++++++.+.|++ .|
T Consensus 307 ~~~l~~~~~~~----------------~~-~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 366 (448)
T 3aow_A 307 IRKMEIAKQST----------------DL-CT---NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE 366 (448)
T ss_dssp HHHHHHHHHHH----------------HS-SC---CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHh----------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22222110000 00 01 1222233333332 244666777777889999999987 56
Q ss_pred CCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCC
Q 048643 411 RVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTE 480 (506)
Q Consensus 411 ~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt 480 (506)
+++ | ..+.+++.... ...++.+++.++|+.+..+..+ .+..++|+++.. .+
T Consensus 367 g~~~~~p~~g~~~~v~~~~~~-----------------~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~--~~ 427 (448)
T 3aow_A 367 GVKWTKPEGGMFIWVTLPDGI-----------------DSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY--VD 427 (448)
T ss_dssp TCEECCCSBSSEEEEECSTTC-----------------CHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS--SC
T ss_pred CeEEeCCCccEEEEEEcCCCC-----------------CHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC--CC
Confidence 566 4 45566653210 1246677777788654443322 245789999854 36
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 048643 481 ERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 481 ~edi~~li~~l~~~~~~l~~ 500 (506)
+++|+++++.|.++.++..+
T Consensus 428 ~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 428 EDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp THHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 77999999999998877643
No 91
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.88 E-value=1.2e-20 Score=190.77 Aligned_cols=281 Identities=14% Similarity=0.095 Sum_probs=198.0
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+++++++|.+.+ ..++|+|||+++..++.+... ++..|+++..+|.++...++..|.
T Consensus 71 ~lr~~la~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~g~-- 130 (363)
T 3ffh_A 71 SLRKEVADFYQLEEE-------ELIFTAGVDELIELLTRVLLD-----------TTTNTVMATPTFVQYRQNALIEGA-- 130 (363)
T ss_dssp HHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCS-----------TTCEEEEEESSCHHHHHHHHHHTC--
T ss_pred HHHHHHHHHhCCChh-------hEEEeCCHHHHHHHHHHHHcc-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 445667777887654 789999999999887776532 456788888999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEeecccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC 293 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhVDaA~gg~~~ 293 (506)
+++.+|.++ ++.+|+++|++++++. +.+|+++.++|++|.+-|+++|.++|+.+ |+++|+|++|+.+..
T Consensus 131 -~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~ 201 (363)
T 3ffh_A 131 -EVREIPLLQ--DGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT 201 (363)
T ss_dssp -EEEEEECCT--TSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS
T ss_pred -EEEEecCCC--CCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC
Confidence 999999985 4799999999998653 44788889999999999999999999988 999999999986543
Q ss_pred cCccchhhhc--CCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 294 ICPEFQHFID--GVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 294 ~~~~~~~~~~--gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
. ....... ....-+.+..+++|+++ ....+|++++ +++.. +.+..... .+ .
T Consensus 202 -~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~-~~l~~~~~----------------~~------~ 255 (363)
T 3ffh_A 202 -P-QPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA-DKEII-RQLNIVRP----------------PF------N 255 (363)
T ss_dssp -S-CCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE-CHHHH-HHHHHTCC----------------SC------C
T ss_pred -c-cccCHHHHhhcCCCEEEEeechhhhcCchhceeeeec-CHHHH-HHHHHhCC----------------CC------C
Confidence 1 1111111 11123355778899997 4456688887 33332 22211100 00 0
Q ss_pred CCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 371 FRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 371 ~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
...+..+++...+ ..+.++++.++..++++++.+.|++.++++ | +.+.+++... .
T Consensus 256 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~-------------------~ 316 (363)
T 3ffh_A 256 TTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGIE-------------------A 316 (363)
T ss_dssp CBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSSC-------------------H
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEECCCC-------------------H
Confidence 1233334444433 235678888999999999999999977887 3 6666665432 2
Q ss_pred HHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 445 RELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.++.+.|.++|+....+..+....++|+++. +++|+++++++|+++
T Consensus 317 ~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 317 GTIFSYLEKNGYITRSGAALGFPTAVRITIG----KEEDNSAVIALLEKL 362 (363)
T ss_dssp HHHHHHHHHTTEECEETTTTTCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEEeCccCCCCCeEEEECC----CHHHHHHHHHHHHHh
Confidence 4567777777864333322223568999984 788999999999875
No 92
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.88 E-value=2.4e-21 Score=211.47 Aligned_cols=319 Identities=10% Similarity=0.015 Sum_probs=202.4
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH-HHHhCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA-AQIVGID 214 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka-~~~~G~g 214 (506)
++.+.+++++|.+. ..++++|+|++|..++.+... ++..|+++...|.|+..+ ++..|.
T Consensus 177 e~e~~lA~~~gae~--------~i~v~nGtt~an~~ai~al~~-----------pGD~VLv~~~~H~S~~~~~~~l~Ga- 236 (730)
T 1c4k_A 177 AAEKHAARVYNADK--------TYFVLGGSSNANNTVTSALVS-----------NGDLVLFDRNNHKSVYNSALAMAGG- 236 (730)
T ss_dssp HHHHHHHHHTTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHTTTTCC-
T ss_pred HHHHHHHHHHCCCc--------EEEECCHHHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHCCC-
Confidence 45578899999874 357777777899888776543 567889999999999998 788888
Q ss_pred CCCeEEEecCCCC---CcccCHHHH-----HHHHHHH-Hh--cCCcc-EEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 215 LKNFRAIKTTKSS---SYGLSPDSL-----LTQINLD-VE--AGLVP-LFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 215 ~~~v~~v~~~~~~---~~~~d~~~L-----~~~i~~~-~~--~g~~p-~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
+++.++.+.++ .+.+|+++| +++|++. .+ ....| .+|+++.+ |++|.+.|+++|+++|++||+++
T Consensus 237 --~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~l 313 (730)
T 1c4k_A 237 --RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYI 313 (730)
T ss_dssp --EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEE
T ss_pred --EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeE
Confidence 88888765321 145899888 7777543 11 01123 46777776 58999999999999999999999
Q ss_pred EeecccccccccCccchh--hhcC-CCCCC----eeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 283 HVDAAYAGSACICPEFQH--FIDG-VEGAD----SFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~--~~~g-i~~aD----si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
|||+||++++.+.+.++. .+.. ..++| .++.++||+++.|.++|++++++... .....++....
T Consensus 314 ivDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l-----~g~~~~i~~~~---- 384 (730)
T 1c4k_A 314 EFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI-----KGQLRYCDHKH---- 384 (730)
T ss_dssp EEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG-----TTSTTCCCHHH----
T ss_pred EEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh-----cCcccccCHHH----
Confidence 999999876555443321 1110 11577 89999999999999999999988642 01111111000
Q ss_pred CccCCCCccccCCCCCC--chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---cce-------------
Q 048643 356 QVVDYKDWQITLSRRFR--SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS---PSA------------- 416 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~--al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~---p~~------------- 416 (506)
.+......+.+...- ...+-.+++.+..++..+++++..++++++++.|++ +++|+ |..
T Consensus 385 --~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~ 462 (730)
T 1c4k_A 385 --FNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTED 462 (730)
T ss_dssp --HHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHH
T ss_pred --HHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccccccccccccccccc
Confidence 000000011111111 122334455554434467789999999999999988 67776 211
Q ss_pred ---------------------------------EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee
Q 048643 417 ---------------------------------VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV 463 (506)
Q Consensus 417 ---------------------------------v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 463 (506)
+.|...+.. ...............+.+.|.++|+ ++...
T Consensus 463 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~------~~~g~~~~~g~~~~~l~~~L~e~GI-~v~~~- 534 (730)
T 1c4k_A 463 MANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGIN------PETGDYEDFGVPATIVANYLRDHGI-IPEKS- 534 (730)
T ss_dssp HTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEE------TTTTEECSSCCCHHHHHHHHHHTTC-CCSEE-
T ss_pred ccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcc------cccccccccCCCHHHHHHHHHHCCc-EEEEC-
Confidence 222221000 0000000000113456667777776 33322
Q ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 464 CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 464 ~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
+...+|+++ +..+|++++++++++|.++.+...
T Consensus 535 --~~~~ir~~~-s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 535 --DLNSILFLM-TPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp --CSSEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCeEEEEe-CCCCCHHHHHHHHHHHHHHHHhcc
Confidence 346789988 577898999999999999988764
No 93
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.88 E-value=4.6e-21 Score=194.36 Aligned_cols=308 Identities=11% Similarity=0.075 Sum_probs=208.8
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
.+.+.+...+......|...+...++++.+.+|+.+.+|.+.+. ...++|+||++++..++.++..
T Consensus 46 ~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~--------- 111 (370)
T 2z61_A 46 PIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP-----DNIIITGGSSLGLFFALSSIID--------- 111 (370)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-----GGEEEESSHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEECCChHHHHHHHHHHhcC---------
Confidence 34444444443333345544567899999999999988865432 3789999999999888877632
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
++..|+++..+|.++..+++..|. +++.+| +|+++|++++++. +.+|+++.+++++|.+.|
T Consensus 112 --~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~--------~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~ 172 (370)
T 2z61_A 112 --DGDEVLIQNPCYPCYKNFIRFLGA---KPVFCD--------FTVESLEEALSDK------TKAIIINSPSNPLGEVID 172 (370)
T ss_dssp --TTCEEEEESSCCTHHHHHHHHTTC---EEEEEC--------SSHHHHHHHCCSS------EEEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEeCCCchhHHHHHHHcCC---EEEEeC--------CCHHHHHHhcccC------ceEEEEcCCCCCcCcccC
Confidence 456788888999999999999999 888887 6899999888642 446777889999999999
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICP--EFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP 344 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~--~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~ 344 (506)
++ |+++|++||+++++|++|+.+..-.+ .... +.+....|.+..++||+++.| ..+|++++++ . +.+.+....
T Consensus 173 ~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~-~~~~~~~~~ 248 (370)
T 2z61_A 173 RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE-FDENLEKTILINGFSKLYAMTGWRIGYVISND-E-IIEAILKLQ 248 (370)
T ss_dssp HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGG-TCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-H-HHHHHHHHH
T ss_pred HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHH-ccCCCCcEEEEecChhccCCccceEEEEEECH-H-HHHHHHHHH
Confidence 99 99999999999999999987543211 1111 112336788899999999743 4488888765 2 222221100
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ce
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SA 416 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~ 416 (506)
.... . ....+..+++...+ +.+.++++.++..++++++.+.|++. +++ | +.
T Consensus 249 ~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 307 (370)
T 2z61_A 249 QNLF------------------I--SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGAY 307 (370)
T ss_dssp HHHT------------------S--SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCBTT
T ss_pred hhcc------------------c--CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCcce
Confidence 0000 0 01223333333333 45667888888999999999999987 676 3 33
Q ss_pred E-EEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 417 V-MDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 417 v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+ .+++... ..++.+.|. +.|+.......+. +..++|+++. +++++|+++++.|.
T Consensus 308 ~~~~~~~~~-------------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~~~~l~ 365 (370)
T 2z61_A 308 YVFPNIGED-------------------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA---NSYENIKEGLERIK 365 (370)
T ss_dssp EECCBCSSC-------------------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC---SCHHHHHHHHHHHH
T ss_pred EEEEecCCC-------------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHH
Confidence 3 3343211 245666665 5676433322221 3568999996 57889999999998
Q ss_pred HHH
Q 048643 493 EQL 495 (506)
Q Consensus 493 ~~~ 495 (506)
++.
T Consensus 366 ~~l 368 (370)
T 2z61_A 366 EFL 368 (370)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 94
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.87 E-value=1.9e-22 Score=205.24 Aligned_cols=299 Identities=11% Similarity=-0.015 Sum_probs=192.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE-cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
++.+.++-+++++.+++++|.++.. ..+| |+|||+++..++..... ++..+++....|++.
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~ai~~l~~-----------~gd~v~~~~~~~~~~- 128 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSNY------KVLFCHGGGRGQFAGVPLNLLG-----------DKTTADYVDAGYWAA- 128 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTTE------EEEEEESCTTHHHHHHHHHHCT-----------TCCEEEEEESSHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhccC-----------CCCeEEEEeCCHHHH-
Confidence 4555666778899999999997542 5677 69999999777654321 222222222344442
Q ss_pred HHHHHh-CCCCCCeEEEecC--CCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHHHhCC
Q 048643 206 KAAQIV-GIDLKNFRAIKTT--KSSSYG-LSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAKQFGI 280 (506)
Q Consensus 206 ka~~~~-G~g~~~v~~v~~~--~~~~~~-~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~ 280 (506)
++...+ ..| +++.+|++ . .|. ++++.++++|+++++ +|++++.+|.+|.+ +|+++|+ +|+
T Consensus 129 ~~~~~a~~~G--~v~~v~~~~~~--~G~~~~~~~~~~~l~~~t~------lV~~~h~et~tG~~i~pi~~i~-----~g~ 193 (386)
T 3qm2_A 129 SAIKEAKKYC--APQIIDAKITV--DGKRAVKPMREWQLSDNAA------YLHYCPNETIDGIAIDETPDFG-----PEV 193 (386)
T ss_dssp HHHHHHTTTS--EEEEEECEEEE--TTEEEECCGGGCCCCTTCS------CEEECSEETTTTEECCCCCCCC-----TTC
T ss_pred HHHHHHHHhC--CeEEEecCccc--CCCCCCchHHHhhcCCCCc------EEEEECCcCCcCEecCchhhhc-----CCC
Confidence 222222 224 58889887 3 234 788888877765543 78899999999995 9999996 799
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccCCCccC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLS-TNPEYLKNKATESKQVVD 359 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~ 359 (506)
++|||++++.+....+-- ..|.+++++|||++ |.|+|++++|+... . .+. ..+.++..... ..
T Consensus 194 ~~~vDa~qs~g~~pidv~--------~~~~~~~s~hK~lG-P~G~g~l~v~~~~~-~-~~~~~~p~~~~~~~~-----~~ 257 (386)
T 3qm2_A 194 VVTADFSSTILSAPLDVS--------RYGVIYAGAQKNIG-PAGLTLVIVREDLL-G-KAHESCPSILDYTVL-----ND 257 (386)
T ss_dssp CEEEECTTTTTSSCCCGG--------GCSEEEEETTTTTC-CTTEEEEEEEGGGC-S-CCCTTSCGGGCHHHH-----HH
T ss_pred EEEEEcccccCCCCCCcc--------ccCEEEEecccccC-CCccEEEEECHHHH-h-hhcccCCcHHHHHHH-----hh
Confidence 999999998887766532 23457799999996 99999999997532 1 111 11222110000 00
Q ss_pred CCCccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCCC-c----c-----ceEEEeecCCCcc
Q 048643 360 YKDWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKRV-S----P-----SAVMDKLKPKYEN 427 (506)
Q Consensus 360 ~~~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~-~----p-----~~v~f~~~~~~~~ 427 (506)
.. .. ..+-. +..+.+-.+++.+-.+ |++++.++..++++++.+.|+++ ++ . | .+++|.+.+..
T Consensus 258 ~~-~~-~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~-- 332 (386)
T 3qm2_A 258 ND-SM-FNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADNT-- 332 (386)
T ss_dssp C---------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSGG--
T ss_pred cC-CC-CCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCcc--
Confidence 00 00 01111 2335666777777677 89999999999999999999987 44 2 1 68999986421
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
....+...|.+.|++...+. .....+|+++. ..+|++|||+++++|+++.++
T Consensus 333 ---------------~~~~~~~~L~~~gI~~~~g~--~~~~~iRiS~~-~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 333 ---------------LDKVFLEESFAAGLHALKGH--RVVGGMRASIY-NAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp ---------------GHHHHHHHHHHTTEECCBCC--TTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ---------------ccHHHHHHHHHCCCEEeCCC--CCcCeEEEEcC-CCCCHHHHHHHHHHHHHHHHh
Confidence 11345566777786432221 11234999985 567888999999999998765
No 95
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.87 E-value=1.3e-21 Score=200.83 Aligned_cols=300 Identities=12% Similarity=0.066 Sum_probs=199.1
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH---
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL--- 204 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~--- 204 (506)
+....+|+.+.+++++++|.+.. -+++++||+|+..++.++.. ++..|+++..+|.++
T Consensus 65 ~~~~~~e~~ar~~la~~~g~~~~--------~i~~~sGt~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~ 125 (407)
T 2dkj_A 65 EVIDRVESLAIERAKALFGAAWA--------NVQPHSGSQANMAVYMALME-----------PGDTLMGMDLAAGGHLTH 125 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGGG
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc--------eEEecchHHHHHHHHHHhcC-----------CCCEEEEecccccCccch
Confidence 43447787777899999998743 35556677888888776632 556788888888776
Q ss_pred HHHHHHhCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKS-SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
..+++..|. .++.++.+.+ +++.+|+++|++++++.. +.+|+++.+++ |.+.|+++|+++|++||++++
T Consensus 126 ~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~li 195 (407)
T 2dkj_A 126 GSRVNFSGK---LYKVVSYGVRPDTELIDLEEVRRLALEHR-----PKVIVAGASAY--PRFWDFKAFREIADEVGAYLV 195 (407)
T ss_dssp TCTTSHHHH---HSEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHhcCc---eEEEEecCCCcccCccCHHHHHHHHhhcC-----CeEEEEecccc--CCCCCHHHHHHHHHHcCCEEE
Confidence 355555665 5555555321 257899999999997521 23566544544 578899999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCCCccCCCC
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~ 362 (506)
+|++|+.++...+.... .++..|.++.++||++..+.+ |+++++++.... .+... ..+..
T Consensus 196 ~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~-~l~~~~~~~~~-------------- 256 (407)
T 2dkj_A 196 VDMAHFAGLVAAGLHPN---PLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGK-RIDKLIFPGIQ-------------- 256 (407)
T ss_dssp EECTTTHHHHHTTCSCC---CTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHH-HHHHHHTTTTC--------------
T ss_pred EEccccccccccCccCC---ccccccEEEEeccccCCCCCc-eEEEECCHHHHH-HHHhhhccccc--------------
Confidence 99999875543322111 123589999999999987775 888887544332 22110 01100
Q ss_pred ccccCCCCCC-chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeecCCCccccccccc
Q 048643 363 WQITLSRRFR-SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLKPKYENCHSQQLV 434 (506)
Q Consensus 363 ~~~~~sr~~~-al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~~~~~~~~~~~~~ 434 (506)
.+.... ...+..+++.+..++++++.++..++++++.+.|++. +++ | +++++++...+
T Consensus 257 ----~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--------- 322 (407)
T 2dkj_A 257 ----GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPKG--------- 322 (407)
T ss_dssp ----SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT---------
T ss_pred ----CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcccC---------
Confidence 011111 1234455665545788999999999999999999987 665 2 66777764310
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeE-------CCEEEEEEEecCC---CCCHHHHHHHHHHHHHHHHH
Q 048643 435 TEEEAINEFNRELLESINASGKAYMTHAVC-------GGIYAMRFAVGAT---LTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 435 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------~g~~~lR~~~~~~---~tt~edi~~li~~l~~~~~~ 497 (506)
....++.+.|.+.|+. +.+... ....++|+++..+ ..++++|++++++|+++.++
T Consensus 323 -------~~~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 323 -------LTGKEAEERLDAVGIT-VNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp -------CCHHHHHHHHHHTTEE-CEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHcCce-ecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 0124566677777864 333221 1246799998532 36788999999999988776
No 96
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.87 E-value=4.9e-21 Score=195.42 Aligned_cols=318 Identities=13% Similarity=0.081 Sum_probs=209.0
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|....+..++++.+.+|+.+.+|.+.+. ...++|+||++++..++.+..+
T Consensus 49 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~l~~---------- 113 (385)
T 1b5p_A 49 VKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP-----EETIVTVGGSQALFNLFQAILD---------- 113 (385)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG-----GGEEEESHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HHEEEcCChHHHHHHHHHHhcC----------
Confidence 3344433333222345444567899999999999988865321 2789999999999877766532
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP- 267 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp- 267 (506)
++..|+++..+|.++...++..|. +++.+|+++++++.+|+++|++++++. +.+|+++.++|+||.+-|
T Consensus 114 -~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~ 183 (385)
T 1b5p_A 114 -PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPK 183 (385)
T ss_dssp -TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred -CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCH
Confidence 556788888999999999999999 999999975335789999999988643 347788889999999855
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCC
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE-GADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~ 343 (506)
+++|+++|++||+++++|++|+.+..-. .... +..+. ..+.+..+++|+++.| ..+|++++++ .. .+.+...
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~-~~-~~~l~~~ 259 (385)
T 1b5p_A 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPK-EV-IKAMASV 259 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCGGGCCEEEECCH-HH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCcccceEEEEeCH-HH-HHHHHHH
Confidence 9999999999999999999998654311 1111 11111 3456677899999754 4488888753 22 2222110
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh-----chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY-----GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
..+. +.....+..+++...+ +.+.++++.++..++.+++.+.|++. +++ |
T Consensus 260 ~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 318 (385)
T 1b5p_A 260 SRQS--------------------TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPS 318 (385)
T ss_dssp HHTT--------------------TCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCS
T ss_pred Hhhc--------------------cCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCC
Confidence 0000 0001223333333333 34567778888888999999999887 666 3
Q ss_pred -ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 -SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 -~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
+. +...+...+ ....++.+.|.+.|+.+..+..+....++|++++ +++++|+++++.|.
T Consensus 319 ~~~~~~~~~~~~~----------------~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~---~~~~~i~~~l~~l~ 379 (385)
T 1b5p_A 319 GAFYVLMDTSPIA----------------PDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFA 379 (385)
T ss_dssp BTTEEEEECTTTC----------------SSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGG
T ss_pred eeEEEEEecCCCC----------------CCHHHHHHHHHHCCeEEecccccCCCCeEEEEec---CCHHHHHHHHHHHH
Confidence 33 333442110 0124566777777765443333322458999985 57888999988887
Q ss_pred HHH
Q 048643 493 EQL 495 (506)
Q Consensus 493 ~~~ 495 (506)
++.
T Consensus 380 ~~l 382 (385)
T 1b5p_A 380 RVL 382 (385)
T ss_dssp GGC
T ss_pred HHH
Confidence 654
No 97
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.87 E-value=9.3e-22 Score=201.08 Aligned_cols=302 Identities=12% Similarity=0.089 Sum_probs=200.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.++...++++. +++++|.+ .+++++|||+|+..++.+++-. ++..|+++..+|.++.
T Consensus 54 ~~~~~~~l~~~----la~~~~~~---------~~i~~~~gt~al~~~l~~~~~~----------~gd~vl~~~~~~~~~~ 110 (391)
T 3dr4_A 54 VGRFIVEFEKA----FADYCGVK---------HAIACNNGTTALHLALVAMGIG----------PGDEVIVPSLTYIASA 110 (391)
T ss_dssp CSHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHTCC----------TTCEEEEESSSCTHHH
T ss_pred CChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCchHHHH
Confidence 45556666655 55566654 4689999999998888776211 5667889999999999
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
.+++..|. +++.+|++++ ++.+|+++|+++++++ +.+|+ .++++|.+.|+++|+++|++||+++++|
T Consensus 111 ~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D 177 (391)
T 3dr4_A 111 NSVTYCGA---TPVLVDNDPR-TFNLDAAKLEALITPR------TKAIM---PVHLYGQICDMDPILEVARRHNLLVIED 177 (391)
T ss_dssp HHHHHTTC---EEEEECBCTT-TCSBCGGGSGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHCCC---EEEEEecCcc-ccCcCHHHHHHhcCCC------ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEE
Confidence 99999999 9999999853 5799999999988653 23444 3568999999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccc
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQI 365 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (506)
+||+.+....+.... .+..++.++++.||+++.+ .+|+++++++.... .+.....+-... .... +..
T Consensus 178 ~a~~~g~~~~~~~~~---~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~-~~~~~~~~g~~~----~~~~----~~~ 244 (391)
T 3dr4_A 178 AAEAVGATYRGKKSG---SLGDCATFSFFGNAIITTG-EGGMITTNDDDLAA-KMRLLRGQGMDP----NRRY----WFP 244 (391)
T ss_dssp CTTCTTCEETTEETT---SSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHH-HHHHHHBTTCCT----TSTT----CCS
T ss_pred CcccccceECCeeec---ccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHH-HHHHHHhcCCCC----CCcc----ccc
Confidence 999865544332111 1224566666689999764 46666666654322 221100000000 0000 011
Q ss_pred cCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c-c-----------eEEEeecCCCccccccc
Q 048643 366 TLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P-S-----------AVMDKLKPKYENCHSQQ 432 (506)
Q Consensus 366 ~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p-~-----------~v~f~~~~~~~~~~~~~ 432 (506)
..+..+....+..++.....++++++.++..++++++.+.|++. +++ + . ++.+++....
T Consensus 245 ~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~------- 316 (391)
T 3dr4_A 245 IVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL------- 316 (391)
T ss_dssp SCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC-------
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc-------
Confidence 12233344555566655556788899999999999999999987 654 2 2 3455554310
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeee--------E-------------CCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 433 LVTEEEAINEFNRELLESINASGKAYMTHAV--------C-------------GGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 433 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~-------------~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
.....++.+.|.++|+.. .+.. + .....+|+++ ++.+|++||+++++.|
T Consensus 317 --------~~~~~~l~~~L~~~GI~v-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~t~edi~~~~~~l 386 (391)
T 3dr4_A 317 --------STTRDQVIKDLDALGIES-RPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT-HAGLTEADIDRVIAAL 386 (391)
T ss_dssp --------SSCHHHHHHHHHHTTCCC-EECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHH
T ss_pred --------chhHHHHHHHHHHCCCce-eecCCccccChhhhhcCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHH
Confidence 001356777787888743 3221 0 0145799987 6788999999999999
Q ss_pred HHH
Q 048643 492 QEQ 494 (506)
Q Consensus 492 ~~~ 494 (506)
+++
T Consensus 387 ~~~ 389 (391)
T 3dr4_A 387 DQV 389 (391)
T ss_dssp HTT
T ss_pred HHH
Confidence 864
No 98
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.87 E-value=9.5e-21 Score=193.89 Aligned_cols=305 Identities=10% Similarity=0.035 Sum_probs=206.3
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCCc
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LVVYGSDQTH 201 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~H 201 (506)
.|...+...++++.+.+|+.+.+|++.+. ...++|+||++++..++.+... ++ ..|+++..+|
T Consensus 71 ~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~~~g~~~al~~~~~~l~~-----------~g~d~vl~~~p~~ 134 (398)
T 3ele_A 71 GYTSAQGDVETRAAIAEFLNNTHGTHFNA-----DNLYMTMGAAASLSICFRALTS-----------DAYDEFITIAPYF 134 (398)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC-----------STTCEEEEESSCC
T ss_pred CcCCCCCcHHHHHHHHHHHHHHhCCCCCh-----HHEEEccCHHHHHHHHHHHHcC-----------CCCCEEEEeCCCc
Confidence 45445566899999999999999965332 3789999999999888776643 45 6788888999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH-
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ- 277 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~- 277 (506)
.++..+++..|. +++.+|.+++ ++.+|+++|++++++. +.+|+++.++|+||.+-| +++|+++|++
T Consensus 135 ~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~ 204 (398)
T 3ele_A 135 PEYKVFVNAAGA---RLVEVPADTE-HFQIDFDALEERINAH------TRGVIINSPNNPSGTVYSEETIKKLSDLLEKK 204 (398)
T ss_dssp THHHHHHHHTTC---EEEEECCCTT-TSSCCHHHHHHTCCTT------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 999999999999 9999999753 5799999999998643 447788899999999977 7778899999
Q ss_pred -----hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchh----HHhhhcCCcccc
Q 048643 278 -----FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSA----LVSSLSTNPEYL 347 (506)
Q Consensus 278 -----~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~----l~~~~~~~~~yl 347 (506)
||+++++|++|+.+..-...... .......+.+..+++|+++ ....+|++++++... +...+.......
T Consensus 205 ~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (398)
T 3ele_A 205 SKEIGRPIFIIADEPYREIVYDGIKVPF-VTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRAL 283 (398)
T ss_dssp HHHHTSCCEEEEECTTTTCBCTTCCCCC-GGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHT
T ss_pred hhccCCCeEEEEeccccccccCCCCcCC-hHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhc
Confidence 99999999999875432111111 1112245577888999998 557789998876521 111110000000
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ce-EEEee
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SA-VMDKL 421 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~-v~f~~ 421 (506)
..-....+..++....+.... ..++..++++++.+.|++. +++ | +. +.+++
T Consensus 284 -------------------~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 340 (398)
T 3ele_A 284 -------------------GYVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKA 340 (398)
T ss_dssp -------------------TCCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEEC
T ss_pred -------------------cccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEc
Confidence 000011122222222221111 3456677788888888876 666 4 44 55555
Q ss_pred cCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 422 KPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
... ...++.+.+.+.|+....+..+....++|+++. +++++|+++++.|.++.+++
T Consensus 341 ~~~------------------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 341 LED------------------DSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC---VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp SSS------------------CHHHHHHHHHTTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred CCC------------------CHHHHHHHHHHCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 321 024566677777875443333333568999984 58889999999999988765
No 99
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.87 E-value=7.9e-21 Score=196.95 Aligned_cols=315 Identities=11% Similarity=0.044 Sum_probs=208.4
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHH--HHHHHhhcccCCCCe--EEEeC
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR--DRVLNKIGRENISKL--VVYGS 197 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar--~~~~~~~~~~~~~~~--~v~~s 197 (506)
..|.......++++.+.+|+.+.+|++.+. ...++|+||++++..++.+.. . ++. .|+++
T Consensus 76 ~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~i~~t~g~t~al~~~~~~l~~~~-----------~gd~~~Vl~~ 139 (437)
T 3g0t_A 76 SIYPNLDGLPELKQEASRFAKLFVNIDIPA-----RACVPTVGSMQGCFVSFLVANRTH-----------KNREYGTLFI 139 (437)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHTTSC-----------TTCSCCEEEE
T ss_pred cCCCCCCChHHHHHHHHHHHHHhhCCCCCc-----ccEEEeCCHHHHHHHHHHHHhcCC-----------CCCccEEEEe
Confidence 345444456899999999999998876432 378999999999988877664 2 444 67778
Q ss_pred CCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHH
Q 048643 198 DQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDV 274 (506)
Q Consensus 198 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~i 274 (506)
..+|.++..+++..|. +++.+|+++ +++.+|+++|+++++.. .+.+|+++.++|++|.+-| +++|+++
T Consensus 140 ~p~~~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~ 210 (437)
T 3g0t_A 140 DPGFNLNKLQCRILGQ---KFESFDLFE-YRGEKLREKLESYLQTG-----QFCSIIYSNPNNPTWQCMTDEELRIIGEL 210 (437)
T ss_dssp ESCCHHHHHHHHHHTC---CCEEEEGGG-GCTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCCcHhHHHHHHHcCC---EEEEEeecC-CCCccCHHHHHHHHhcC-----CceEEEEeCCCCCCCCcCCHHHHHHHHHH
Confidence 8999999999999999 999999974 34689999999999321 2346777889999999976 7788999
Q ss_pred HHHhCCEEEeecccccccccCc-cc---h---hhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcC-Ccc
Q 048643 275 AKQFGIWVHVDAAYAGSACICP-EF---Q---HFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLST-NPE 345 (506)
Q Consensus 275 a~~~g~~lhVDaA~gg~~~~~~-~~---~---~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~ 345 (506)
|++||+++++|++|+.+..-.. .. . ..+.+....+.+..++||+++ ....+|++++++ ....+.+.. ...
T Consensus 211 a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~ 289 (437)
T 3g0t_A 211 ATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG-KLYEREYPDLEES 289 (437)
T ss_dssp HHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH-HHHHCBCGGGHHH
T ss_pred HHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH-HHhhhhhhccccc
Confidence 9999999999999976433210 00 0 111122355677889999998 556788888763 222101000 000
Q ss_pred c---------cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch--hH---HHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 346 Y---------LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV--AN---LRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 346 y---------l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~--~g---~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
+ +.... ...+-....+..+++...+.. ++ ++++.++..++++++.+.|++. +
T Consensus 290 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 355 (437)
T 3g0t_A 290 FGRLRFGEALSSSAL-------------YALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-G 355 (437)
T ss_dssp HSCSBHHHHHHTTHH-------------HHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-T
T ss_pred ccccchhHHHHHHHH-------------hhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 0 10000 000001122333444443322 22 7888999999999999999986 4
Q ss_pred Cc---------c----ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECC---EEEEEEEec
Q 048643 412 VS---------P----SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGG---IYAMRFAVG 475 (506)
Q Consensus 412 ~~---------p----~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g---~~~lR~~~~ 475 (506)
++ | ..+.+++.+. ...++.+.|.++|+. +.+....+ ..++|++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~l~~~L~~~gi~-v~~~~~~~~~~~~~iRis~~ 416 (437)
T 3g0t_A 356 FNIVYDKDGNEPLADGFYFTVGYKGM------------------DSSKLIEKFVRYGMC-AITLKTTGSKRNEAMRICTS 416 (437)
T ss_dssp EEESSCEETTEECCSSSEEEEEETTC------------------CHHHHHHHHHHTTEE-CEESTTTTCCCTTCEEEECS
T ss_pred CEEeccccCCCCCceeEEEEEecCCC------------------CHHHHHHHHHHcCeE-EeeccccCCCCCCEEEEEEe
Confidence 32 1 3455555421 124567777777764 44433222 157999995
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 048643 476 ATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 476 ~~~tt~edi~~li~~l~~~~~~ 497 (506)
. .++++|++++++|+++.++
T Consensus 417 -~-~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 417 -L-LPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp -S-SCGGGHHHHHHHHHHHHHH
T ss_pred -c-CCHHHHHHHHHHHHHHHhc
Confidence 3 3777999999999988653
No 100
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.87 E-value=1.3e-20 Score=193.94 Aligned_cols=329 Identities=13% Similarity=0.075 Sum_probs=213.8
Q ss_pred HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...+... ...|...+...++++.+.+|+.+.+|.+.+. ....++|+||++|+..++.+...
T Consensus 53 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~----~~~v~~t~g~~~a~~~~~~~~~~------- 121 (412)
T 2x5d_A 53 PHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP----ESEAIVTIGSKEGLAHLMLATLD------- 121 (412)
T ss_dssp HHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESCHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CcCEEEcCChHHHHHHHHHHhCC-------
Confidence 34555555555432 2345445567899999999999988874220 01689999999999888776532
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|.++..+++..|. +++.+|.++++++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 122 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~ 188 (412)
T 2x5d_A 122 ----HGDTILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQC 188 (412)
T ss_dssp ----TTCEEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCc
Confidence 456788888999999999999999 999999876434568999999887532 3367778889999998
Q ss_pred cC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhh
Q 048643 266 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSS 339 (506)
Q Consensus 266 dp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 339 (506)
-| +++|+++|++||+++++|++|+.+.......... +.+....|.++.++||+++ ..+.+|+++++ +... +.
T Consensus 189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~-~~ 266 (412)
T 2x5d_A 189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN-PELV-SA 266 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC-HHHH-HH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC-HHHH-HH
Confidence 65 7899999999999999999998765321111111 1111256788999999997 44568988874 3322 22
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p 414 (506)
+.....+.. . ....+..+++...+ +.+.++++.++..++++++.+.|++. +++ |
T Consensus 267 l~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 325 (412)
T 2x5d_A 267 LARIKSYHD------------------Y--GTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMVENP 325 (412)
T ss_dssp HHHHHHHHC------------------C--CCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCC
T ss_pred HHHHHhhhc------------------c--CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecCC
Confidence 321100000 0 01223333333333 35678888889999999999999887 666 3
Q ss_pred --c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 --S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 --~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li 488 (506)
+ ++.+++... . . .....++.+.|.+ .|+....+..+. +..++|+++.. ++++|++++
T Consensus 326 ~~g~~~~~~~~~~-~---------~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l 388 (412)
T 2x5d_A 326 KASMYVWAKIPEP-Y---------A----HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE---NRDRLRQAV 388 (412)
T ss_dssp SBSSEEEEECCTT-T---------G----GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHH
T ss_pred CeeeEEEEEcCCc-c---------C----CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHH
Confidence 4 455565321 0 0 0012456666654 476443332221 34689999953 688999999
Q ss_pred HHHHHHHHHHH
Q 048643 489 TMVQEQLEAFL 499 (506)
Q Consensus 489 ~~l~~~~~~l~ 499 (506)
+.|.++.+++.
T Consensus 389 ~~l~~~l~~~~ 399 (412)
T 2x5d_A 389 RGIKAMFRADG 399 (412)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999887754
No 101
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.87 E-value=4.7e-21 Score=193.98 Aligned_cols=282 Identities=13% Similarity=0.086 Sum_probs=195.9
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+++++++|.+.. ...++|+||++++..++.+... ++..|+++..+|.++...++..|.
T Consensus 71 ~l~~~la~~~g~~~~------~~i~~~~g~t~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~-- 131 (367)
T 3euc_A 71 ALRAKLKEVMQVPAG------MEVLLGNGSDEIISMLALAAAR-----------PGAKVMAPVPGFVMYAMSAQFAGL-- 131 (367)
T ss_dssp HHHHHHHHHHTCCTT------CEEEEEEHHHHHHHHHHHHTCC-----------TTCEEEEEESCSCCSCHHHHTTTC--
T ss_pred HHHHHHHHHhCCCCc------ceEEEcCCHHHHHHHHHHHHcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 345667778888322 2789999999999877766532 456778888899999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHHHHh--CCEEEeeccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVAKQF--GIWVHVDAAYAG 290 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia~~~--g~~lhVDaA~gg 290 (506)
+++.+|+++ ++.+|+++|++++++.. +.+|+++.++|++|.+ +++++|+++|++| |+++++|++|+.
T Consensus 132 -~~~~v~~~~--~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~ 203 (367)
T 3euc_A 132 -EFVGVPLRA--DFTLDRGAMLAAMAEHQ-----PAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP 203 (367)
T ss_dssp -EEEEEECCT--TSCCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCC
T ss_pred -eEEEecCCC--CCCCCHHHHHHHhhccC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchh
Confidence 999999986 57999999999998731 2377778999999999 5688888899999 999999999986
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
+.. ......+. ....+.+..++||++.....+|+++.+ +... ..+..... .++
T Consensus 204 ~~~--~~~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~-~~~~~~~~----------------~~~------ 256 (367)
T 3euc_A 204 FAQ--ESWMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAGD-PQWL-EQLDKVRP----------------PYN------ 256 (367)
T ss_dssp SSS--CCSGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEEC-HHHH-HHHGGGCC----------------SSC------
T ss_pred hcc--cchHHHHh-hCCCEEEEecchhhcccccCceeeeeC-HHHH-HHHHHhCC----------------CCC------
Confidence 431 11111221 123446677899995455678888774 3332 22211000 000
Q ss_pred CCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 371 FRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 371 ~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
...+..+++...+. .+.++++.++..++++++.+.|+++|+++ | +.+.+++. . .
T Consensus 257 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~-~-------------------~ 316 (367)
T 3euc_A 257 VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP-D-------------------A 316 (367)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS-C-------------------H
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC-C-------------------H
Confidence 12233333333332 45678889999999999999999998887 4 55666553 2 2
Q ss_pred HHHHHHHHhcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 445 RELLESINASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 445 ~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.++.+.|.+.|+.......+ .+..++|+++. +++|+++++++|+++.
T Consensus 317 ~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 317 AQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASL 365 (367)
T ss_dssp HHHHHHHHTTTEECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCeEEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHh
Confidence 45667777778743332221 23468999974 7889999999998864
No 102
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.87 E-value=4e-21 Score=198.87 Aligned_cols=333 Identities=10% Similarity=0.048 Sum_probs=217.0
Q ss_pred HHHHHHHhhcCC---CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 108 FLGEMLSSGFNV---VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 108 ~~~~~l~~~~n~---~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
.+.+.+...++. ....|.......++++.+.+|+.+.+|.+.+. . ..++|+||++|+..++.++..
T Consensus 54 ~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~----- 123 (429)
T 1yiz_A 54 YALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP-----MTEVLVTVGAYEALYATIQGHVD----- 123 (429)
T ss_dssp HHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCT-----TTSEEEESHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cCCEEEecChHHHHHHHHHHhcC-----
Confidence 444555555543 22345444457899999999999998865331 3 589999999999888777532
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEEEE
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSS--------SYGLSPDSLLTQINLDVEAGLVPLFLCA 255 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~Vv~ 255 (506)
++..|+++..+|.++..+++..|. +++.+|.+.++ ++.+|+++|++++++. +.+|++
T Consensus 124 ------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~ 188 (429)
T 1yiz_A 124 ------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMIII 188 (429)
T ss_dssp ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEEE
T ss_pred ------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEEE
Confidence 456778888899999999999999 99999987642 4689999999988532 457777
Q ss_pred eccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEE
Q 048643 256 TIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLW 329 (506)
Q Consensus 256 t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~ 329 (506)
+.++|++|.+-| +++|+++|++||+++++|++|+++.......... +.+....|.+..++||+++.| +.+|+++
T Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 268 (429)
T 1yiz_A 189 NTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAY 268 (429)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEE
Confidence 889999999975 9999999999999999999998754321111111 111235788899999998743 4589888
Q ss_pred EeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh----c--hhHHHHHHHHHHHHHHHHH
Q 048643 330 VKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY----G--VANLRHFLRSHVNMAKLFE 403 (506)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----G--~~g~~~~i~~~~~~a~~l~ 403 (506)
+++ .. .+.+.....+.. ++ .+ ......+..+|+.. + .+.++++.++..++++++.
T Consensus 269 ~~~-~~-~~~l~~~~~~~~--------------~~--~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (429)
T 1yiz_A 269 GPE-AL-LKNLQMVHQNCV--------------YT--CA-TPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMA 329 (429)
T ss_dssp SCH-HH-HHHHHHHHHTTT--------------CC--CC-HHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred eCH-HH-HHHHHHHHhhcc--------------cC--CC-hHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHH
Confidence 863 22 223321100000 00 00 01112333444441 3 5568888888999999999
Q ss_pred HHHHcCCCCc---c---ceEEEeecCCCccc-ccccccchHHHHHHHHHHHHHHHH-hcCcEEEeee-eEC-------CE
Q 048643 404 RLVASDKRVS---P---SAVMDKLKPKYENC-HSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHA-VCG-------GI 467 (506)
Q Consensus 404 ~~l~~~~~~~---p---~~v~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~~-------g~ 467 (506)
+.|++. +++ | .++++++....... .++. . . .....++.++|. +.|+. +.+. .+. +.
T Consensus 330 ~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~----~~~~~~l~~~l~~~~gv~-v~~g~~f~~~~~~~~~~ 401 (429)
T 1yiz_A 330 SFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQE-T-D----ARKDYRFTKWMTKSVGLQ-GIPPSAFYSEPNKHLGE 401 (429)
T ss_dssp HHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSS-S-S----SCHHHHHHHHHHHHTSEE-CBCGGGGSCGGGGGGTT
T ss_pred HHHHhC-CCcccCCCcceEEEEEccccccccccccc-c-c----CCCHHHHHHHHHHhCCEE-EeCchHhCCCcccCCCC
Confidence 999887 666 3 46666664320000 0000 0 0 001245666665 56764 4433 221 25
Q ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 468 YAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 468 ~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
.++|+++. +++++|+++++.|+++.
T Consensus 402 ~~iRis~~---~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 402 DFVRYCFF---KKDENLQKAAEILRKWK 426 (429)
T ss_dssp TEEEEECC---SCHHHHHHHHHHHHHHS
T ss_pred CeEEEEec---CCHHHHHHHHHHHHHhc
Confidence 68999985 37889999999998764
No 103
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.87 E-value=1.3e-20 Score=191.88 Aligned_cols=285 Identities=12% Similarity=0.037 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+.+++++|.+ ..+++++||+++..++.+... ++..|+++...|.++..+++..
T Consensus 84 ~~~~~l~~~la~~~g~~---------~~i~~~sGt~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 143 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYS---------RALLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASLS 143 (384)
T ss_dssp HHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCC---------cEEEeCCcHHHHHHHHHHhCC-----------CCcEEEEcccccHHHHHHHHHc
Confidence 34455566777777875 246666679999887765422 5567888999999999999999
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccc
Q 048643 212 GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 212 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~ 291 (506)
|. +++.+|. +|+++|++++++.. ..+.+|+++.+++++|.+.|+++|+++|++||+++++|++|+.+
T Consensus 144 g~---~~~~~~~-------~d~~~l~~~l~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 210 (384)
T 1bs0_A 144 PS---QLRRFAH-------NDVTHLARLLASPC---PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTG 210 (384)
T ss_dssp SS---EEEEECT-------TCHHHHHHHHHSCC---SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CC---CEEEeCC-------CCHHHHHHHHHhcC---CCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccc
Confidence 98 8888873 48999999887531 12457788889999999999999999999999999999999754
Q ss_pred ccc-C-ccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCC
Q 048643 292 ACI-C-PEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 292 ~~~-~-~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
... . ...... .+ ...|.++.++||+++ |.| |+++++ ++.. +.+.. ...|.. +
T Consensus 211 ~~~~~~~~~~~~-~~-~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~-~~l~~~~~~~~~-------------------~ 265 (384)
T 1bs0_A 211 VIGEQGRGSCWL-QK-VKPELLVVTFGKGFG-VSG-AAVLCS-STVA-DYLLQFARHLIY-------------------S 265 (384)
T ss_dssp TSSGGGCCHHHH-TT-CCCSEEEEESSSTTS-SCC-EEEEEC-HHHH-HHHHHHCHHHHS-------------------S
T ss_pred eecCCCCchHHh-cC-CCCcEEEeeccchhh-ccC-cEEEeC-HHHH-HHHHHhchhhhc-------------------C
Confidence 321 0 001111 12 257899999999998 445 877775 3332 22221 111211 0
Q ss_pred CCCCch---HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHH
Q 048643 369 RRFRSL---KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 369 r~~~al---~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
.....+ .+..+++.+...+.+++.++..++++++.+.|++. +++ | +++++++..
T Consensus 266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~----------------- 327 (384)
T 1bs0_A 266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLADSCSAIQPLIVGD----------------- 327 (384)
T ss_dssp BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEECSCCSSBCCEEEES-----------------
T ss_pred CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCEEEEEeCC-----------------
Confidence 011222 23334444322256788889999999999999987 566 3 556666532
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
.....++.+.|.++|+. +.+... .+..++|+++. ..+++++|++++++|+++
T Consensus 328 ~~~~~~l~~~l~~~gi~-v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 328 NSRALQLAEKLRQQGCW-VTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHHHHHTTEE-CCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCcE-EEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence 12245677777777764 444322 24578999985 566888999999999875
No 104
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.87 E-value=1.1e-20 Score=193.44 Aligned_cols=319 Identities=15% Similarity=0.117 Sum_probs=207.3
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 106 AGFLGEMLSSGFNVV---GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
+..+.+.+...+... ...|...+...++++.+.+|+ |.+.+ ..++|+|+++++..++.+...
T Consensus 49 ~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~----g~~~~-------~v~~~~g~~~al~~~~~~~~~---- 113 (397)
T 2zyj_A 49 KEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI----GVRPE-------EVLITTGSQQALDLVGKVFLD---- 113 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH----TSCGG-------GEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh----CCChh-------hEEEeccHHHHHHHHHHHhCC----
Confidence 344455554444321 123444445677777666665 65544 689999999998877776532
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE-EEeccCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFL-CATIGTTA 261 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~V-v~t~gtt~ 261 (506)
++..|++...+|.++...++..|. +++.+|.++ + .+|+++|++++++. .+.+| +.+.++|+
T Consensus 114 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~--~-~~d~~~l~~~l~~~-----~~~~v~~~~~~~np 175 (397)
T 2zyj_A 114 -------EGSPVLLEAPSYMGAIQAFRLQGP---RFLTVPAGE--E-GPDLDALEEVLKRE-----RPRFLYLIPSFQNP 175 (397)
T ss_dssp -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHC-----CCSCEEECCBSCTT
T ss_pred -------CCCEEEEeCCCcHHHHHHHHHcCC---EEEecCcCC--C-CCCHHHHHHHHhhc-----CCeEEEECCCCcCC
Confidence 456677888899999999999999 999999875 2 39999999999761 12244 56788999
Q ss_pred CCcccCh---hHHHHHHHHhCCEEEeecccccccccCc---cchhhhcCCC---CCCeeEEcCccccCCCCcceEEEEeC
Q 048643 262 ITAVDPL---KPLCDVAKQFGIWVHVDAAYAGSACICP---EFQHFIDGVE---GADSFSLNAHKWFFTTLDCCCLWVKD 332 (506)
Q Consensus 262 tG~idpl---~~I~~ia~~~g~~lhVDaA~gg~~~~~~---~~~~~~~gi~---~aDsi~~~~hK~l~~p~~~g~~~~r~ 332 (506)
+|.+-|. ++|+++|++||+++++|++|+.+..... ..... +.. .-..+..++||+++....+|++++++
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 253 (397)
T 2zyj_A 176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL--AREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP 253 (397)
T ss_dssp TCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH--HHHHTCCCEEEEEESTTTTCGGGCCEEEECCH
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh--CcccCCCeEEEEecccccccccceeEEEecCH
Confidence 9999764 5999999999999999999987543211 11111 001 12256788999999336789988863
Q ss_pred chhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch---hHHHHHHHHHHHHHHHHHHHHHc-
Q 048643 333 PSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV---ANLRHFLRSHVNMAKLFERLVAS- 408 (506)
Q Consensus 333 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~---~g~~~~i~~~~~~a~~l~~~l~~- 408 (506)
+ +.+.+.....+. +. ++ ..+..+++...+.. +.++++.++..++++++.+.|++
T Consensus 254 -~-~~~~l~~~~~~~----------------~~-~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (397)
T 2zyj_A 254 -E-ALQKLVQAKQGA----------------DL-HT---PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE 311 (397)
T ss_dssp -H-HHHHHHHHHHHH----------------HS-SC---CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -H-HHHHHHHHHHhh----------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 222332110000 00 00 22333333333322 45777788888899999999987
Q ss_pred CC-CCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE----CCEEEEEEEecCC
Q 048643 409 DK-RVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC----GGIYAMRFAVGAT 477 (506)
Q Consensus 409 ~~-~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~ 477 (506)
.| +++ | ..+.+++.... ...++.+.|.++|+.+..+..+ .+..++|+++...
T Consensus 312 ~~~g~~~~~~~~g~~~~~~~~~~~-----------------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~ 374 (397)
T 2zyj_A 312 VPKEVRYTRPKGGMFVWMELPKGL-----------------SAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL 374 (397)
T ss_dssp SCTTSEECCCSBSSEEEEECSTTC-----------------CHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS
T ss_pred CCCCeEEccCCccEEEEEEcCCCC-----------------CHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC
Confidence 56 566 4 55666664210 1346777777888654433222 1356899999653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHc
Q 048643 478 LTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~~~~l~~ 500 (506)
++++|+++++.|+++.+++.+
T Consensus 375 --~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 375 --DREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHHh
Confidence 788999999999998877653
No 105
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.87 E-value=2.7e-20 Score=191.83 Aligned_cols=293 Identities=12% Similarity=0.094 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH---
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ--- 209 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~--- 209 (506)
...++.+++++++|.+ ..++++||++|+..++.++.. ++..|+++...|.++.....
T Consensus 57 ~~~~l~~~la~~~g~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd~vi~~~~~~~~~~~~~~~~~ 116 (412)
T 2cb1_A 57 TAKALEERLKALEGAL---------EAVVLASGQAATFAALLALLR-----------PGDEVVAAKGLFGQTIGLFGQVL 116 (412)
T ss_dssp HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHH
Confidence 3445557788888864 468999999999888876522 45678888899988777643
Q ss_pred -HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 210 -IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 210 -~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
..|+ +++.+|. |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+|+|+|++|
T Consensus 117 ~~~g~---~~~~~~~--------~~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~ 179 (412)
T 2cb1_A 117 SLMGV---TVRYVDP--------EPEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp TTTTC---EEEEECS--------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred HHcCC---EEEEECC--------CHHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence 3566 7888874 388888888653 447888999999999999999999999999999999999
Q ss_pred ccc-cccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCchh-HHhhhcCCccccCCcc----ccCCCcc-CC
Q 048643 289 AGS-ACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSA-LVSSLSTNPEYLKNKA----TESKQVV-DY 360 (506)
Q Consensus 289 gg~-~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~-l~~~~~~~~~yl~~~~----~~~~~~~-~~ 360 (506)
+.+ ....+ .. .++|.++.++||+++.|.+ .|.++++++.. +.+.....++...... ....... ..
T Consensus 180 ~~~~~~~~~-~~------~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (412)
T 2cb1_A 180 GAAGALCRP-LA------WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERV 252 (412)
T ss_dssp GTTTTSCCG-GG------GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHH
T ss_pred ccccccCCc-cc------cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHH
Confidence 876 32222 11 1689999999999998876 77777665321 1000000111100000 0000000 00
Q ss_pred CCcc-ccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-------------------ce
Q 048643 361 KDWQ-ITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-------------------SA 416 (506)
Q Consensus 361 ~~~~-~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-------------------~~ 416 (506)
..++ ...+....+...|+.+.. .+.+.+++++..++++++.+.|.+.++++ | ++
T Consensus 253 r~~~~~~~g~~~~~~~a~~~~~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~i 330 (412)
T 2cb1_A 253 RTLGLSLCGMALSPFNAYLLFQG--LETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPI 330 (412)
T ss_dssp HHHHTTTTCCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSE
T ss_pred HHHHHHhcCCCCChHHhHHHHcC--CchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceE
Confidence 0001 011223355666666654 45677788888899999999999887765 2 27
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee--------eEC----------------C--EEEE
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA--------VCG----------------G--IYAM 470 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~~----------------g--~~~l 470 (506)
++|.+ +. .+.+.+.+.+.|+.. ... ... | ...+
T Consensus 331 v~~~~-~~-------------------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~i 389 (412)
T 2cb1_A 331 LTLDL-GD-------------------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLV 389 (412)
T ss_dssp EEEEC-SS-------------------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEE
T ss_pred EEEEe-CC-------------------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeE
Confidence 88887 43 123344444556643 321 000 1 4689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 048643 471 RFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~ 493 (506)
|+++. ..+++++|+.+.++|++
T Consensus 390 R~s~g-~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 390 RVSVG-LEDPLDLLALFEEALEA 411 (412)
T ss_dssp EEECC-SSCHHHHHHHHHHHHHC
T ss_pred EEEec-cCCHHHHHHHHHHHHhh
Confidence 99995 66778899999999864
No 106
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.87 E-value=1.4e-20 Score=196.96 Aligned_cols=309 Identities=12% Similarity=0.055 Sum_probs=184.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..+...++|..+++++++++|.+.+.. +..+++++||+||..++.+..+ ++..|+++...|.+..
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~----~~~v~~~sGt~An~~al~al~~-----------pGD~Vl~~~~~h~g~l 158 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPDGGHL 158 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC-----------SCEECCC---------
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccC----ceEEeCCchHHHHHHHHHHHcC-----------CCCEecccCccccccc
Confidence 335567999999999999999986420 0135666899999988877643 6778888887764321
Q ss_pred --------HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH
Q 048643 206 --------KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ 277 (506)
Q Consensus 206 --------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~ 277 (506)
+.+...|... .++.+++++ +++.+|+++|++++++.. |.+|+++. +.+|.+.|+++|+++|++
T Consensus 159 ~h~~~~~~~~i~~~g~~~-~~~~~~vd~-~~~~iD~d~le~~l~~~~-----~klIi~~~--s~~~~~~dl~~i~~ia~~ 229 (490)
T 2a7v_A 159 THGYMSDVKRISATSIFF-ESMPYKLNP-KTGLIDYNQLALTARLFR-----PRLIIAGT--SAYARLIDYARMREVCDE 229 (490)
T ss_dssp -----------------------CCBCT-TTCSBCHHHHHHHHHHHC-----CSEEEECC--SSCCSCCCHHHHHHHHHH
T ss_pred cchhhhcchhHHHcCCeE-EEEeccccc-ccCCcCHHHHHHHHhhcC-----CcEEEEcC--CCCCCcccHHHHHHHHHH
Confidence 1334555511 233444553 357999999999997632 33555443 345677899999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCch-------------hHHhhhcCCc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS-------------ALVSSLSTNP 344 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~-------------~l~~~~~~~~ 344 (506)
||+++|+|+||+.++.........+ +.+|.++.++||+|+.|.| |++++++.. .+.+.+..
T Consensus 230 ~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~-- 303 (490)
T 2a7v_A 230 VKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINF-- 303 (490)
T ss_dssp TTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHH--
T ss_pred cCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHHH--
Confidence 9999999999875544332221122 3699999999999988865 888887641 01111110
Q ss_pred cccCCccccCCCccCCCCccccCCCCCC-chHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c-----ce
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFR-SLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P-----SA 416 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p-----~~ 416 (506)
.++. +.+++.... ..++..+++..-.+.+.++.++..+++++|++.|.+. ||+ + .+
T Consensus 304 -~~~~--------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~l 367 (490)
T 2a7v_A 304 -AVFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL 367 (490)
T ss_dssp -HHTT--------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred -Hhcc--------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeE
Confidence 0000 111221111 1223344554434567888899999999999999987 776 1 56
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-E-----CCEEEEEEEe---cCCCCCHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-C-----GGIYAMRFAV---GATLTEERHVMVA 487 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~lR~~~---~~~~tt~edi~~l 487 (506)
+.+.+.+.+. + ..++.+.|.+.|+. +.... + .....||+++ ++...+++|++++
T Consensus 368 v~vdl~~~g~---------~-------~~~~~~~L~~~GI~-v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~ 430 (490)
T 2a7v_A 368 VLVDLRPKGL---------D-------GARAERVLELVSIT-ANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRV 430 (490)
T ss_dssp EEEECTTTTC---------C-------HHHHHHHHHHTTEE-CEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHH
T ss_pred EEEEeCCCCC---------C-------HHHHHHHHHhCCeE-EecCccCCCCCCCCCCceEecccccccCCCCHHHHHHH
Confidence 6666654311 1 23455666666764 43221 1 1235799965 2334578899999
Q ss_pred HHHHHHHHHH
Q 048643 488 WTMVQEQLEA 497 (506)
Q Consensus 488 i~~l~~~~~~ 497 (506)
.+.|.++...
T Consensus 431 ~~~i~~~l~~ 440 (490)
T 2a7v_A 431 VDFIDEGVNI 440 (490)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887653
No 107
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.86 E-value=5.7e-21 Score=195.97 Aligned_cols=316 Identities=14% Similarity=0.071 Sum_probs=204.7
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+... .|..++...+++ +.+++++|.+ ..+++++||+|+..++.+++-.
T Consensus 46 v~~a~~~~~~~~--~y~~~~~~~~l~----~~la~~~~~~---------~~v~~~~Gt~a~~~~l~~~~~~--------- 101 (399)
T 2oga_A 46 TDAAIARVLDSG--RYLLGPELEGFE----AEFAAYCETD---------HAVGVNSGMDALQLALRGLGIG--------- 101 (399)
T ss_dssp HHHHHHHHHHHT--CCSSSHHHHHHH----HHHHHHTTSS---------EEEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHhcC--CCCCchhHHHHH----HHHHHHHCCC---------eEEEecCHHHHHHHHHHHhCCC---------
Confidence 344444444322 343445555555 4566677764 3588888999998887765211
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
++..|+++..+|.++..+++..|. +++.+|++++ ++.+|+++|+++|++. +.+|+ .++++|.+.|+
T Consensus 102 -~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l 167 (399)
T 2oga_A 102 -PGDEVIVPSHTYIASWLAVSATGA---TPVPVEPHED-HPTLDPLLVEKAITPR------TRALL---PVHLYGHPADM 167 (399)
T ss_dssp -TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCSS-SSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCH
T ss_pred -CcCEEEECCCccHHHHHHHHHCCC---EEEEEecCCC-CCCcCHHHHHHhcCCC------CeEEE---EeCCcCCccCH
Confidence 456788888999999999999999 9999998753 4789999999998653 33454 35789999999
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCc--cccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
++|+++|+++|+++++|++|+.+.... .+. +. ...|.++.++| |+++.|-.+|+++++++.... .+.....+
T Consensus 168 ~~i~~l~~~~~~~li~Dea~~~g~~~~--~~~-~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~-~l~~~~~~ 241 (399)
T 2oga_A 168 DALRELADRHGLHIVEDAAQAHGARYR--GRR-IG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAE-RLRMLRNY 241 (399)
T ss_dssp HHHHHHHHHHTCEECEECTTCTTCEET--TEE-TT--CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHH-HHHHHHBT
T ss_pred HHHHHHHHHcCCEEEEECcccccCccC--Cee-cc--cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHH-HHHHHHhc
Confidence 999999999999999999997654321 111 11 13688888885 999874457777776555432 22110000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---c-e-E
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---S-A-V 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~-~-v 417 (506)
-.. ..+.........+...+..++.+..+ +.++++.++..++++++.+.|+++++++ | + + +
T Consensus 242 g~~--------~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 311 (399)
T 2oga_A 242 GSR--------QKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWH 311 (399)
T ss_dssp TCS--------STTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCS
T ss_pred Ccc--------ccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeE
Confidence 000 00100011122234556666655543 4566778888899999999999888776 2 1 1 2
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-----------C-------------EEEEEEE
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-----------G-------------IYAMRFA 473 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----------g-------------~~~lR~~ 473 (506)
.|.+.... ..++.+.|.++|+.. ...... + ..++|++
T Consensus 312 ~~~~~~~~------------------~~~l~~~L~~~gI~v-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~ 372 (399)
T 2oga_A 312 LFTVRTER------------------RDELRSHLDARGIDT-LTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLP 372 (399)
T ss_dssp SEEEECSS------------------HHHHHHHHHHTTBCC-BCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEEC
T ss_pred EEEEECCC------------------HHHHHHHHHHCCCce-ecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEcc
Confidence 23332210 245667777778743 321100 0 2579999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 474 VGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 474 ~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+ ++.++++||++++++|+++.+++
T Consensus 373 ~-~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 373 I-GPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp C-STTCCHHHHHHHHHHHHHHHHSC
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 7 57788999999999999987654
No 108
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.86 E-value=4.8e-21 Score=196.39 Aligned_cols=336 Identities=11% Similarity=0.002 Sum_probs=208.1
Q ss_pred CCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE-cCCchHHHHH
Q 048643 93 PNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILC 171 (506)
Q Consensus 93 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~a~l~ 171 (506)
|..+.+.+++..++..+.+.+....+........+|...++..++.+++++++|.+... ..++ |+|||+++..
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~i~~~t~g~t~al~~ 112 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGY------EVILGNGGATAFWDA 112 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTC------EEEEEETCHHHHHHH
T ss_pred cCCccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEeCCchhHHHHH
Confidence 33344445544444444444443221211111235666777888999999999997422 5777 9999999988
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEeCCCCchH-HHHHHHHh--CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 048643 172 TLTAARDRVLNKIGRENISKLVVYGSDQTHCA-LQKAAQIV--GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGL 248 (506)
Q Consensus 172 al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ka~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 248 (506)
++.+... ++ +++++...|.. ..+.+... |. +++.||++. + ...+. + +. .
T Consensus 113 ~~~~l~~-----------~g-v~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~-g-~~~~~-~----i~------~ 164 (398)
T 2fyf_A 113 AAFGLID-----------KR-SLHLTYGEFSAKFASAVSKNPFVG---EPIIITSDP-G-SAPEP-Q----TD------P 164 (398)
T ss_dssp HHHHTCS-----------SC-EEEEECSHHHHHHHHHHHHCTTSC---CCEEEECCT-T-CCCCC-C----CC------T
T ss_pred HHHHhcC-----------CC-eEEEeCCHHHHHHHHHHHHhCCCC---ceEEEecCC-C-CCCCc-c----cc------C
Confidence 8776532 34 23334445532 23345666 56 788999872 2 23332 1 22 1
Q ss_pred ccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEE
Q 048643 249 VPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCL 328 (506)
Q Consensus 249 ~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~ 328 (506)
.+.+|+++.++|++|.+.|+++|.++ +|+|+|+|++|+.+....+ +..+|.++.++||+++.|.++|++
T Consensus 165 ~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l 233 (398)
T 2fyf_A 165 SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLA 233 (398)
T ss_dssp TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEE
T ss_pred CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEE
Confidence 34578888999999999999999988 8999999999976553321 124899999999999988678888
Q ss_pred EEeCchhHHhhhcC-------CccccCCccccCCCccCCCCccccCCCC-CCchHHHHHHHHhchhH-HHHHHHHHHHHH
Q 048643 329 WVKDPSALVSSLST-------NPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWLVIRNYGVAN-LRHFLRSHVNMA 399 (506)
Q Consensus 329 ~~r~~~~l~~~~~~-------~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~G~~g-~~~~i~~~~~~a 399 (506)
++++. .+. .+.. .++|+...... .... ..... .+.. .....+..+++.+...| ++++.++..+++
T Consensus 234 ~~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 307 (398)
T 2fyf_A 234 IMSPA-ALS-RIEAIAATGRWVPDFLSLPIAV--ENSL-KNQTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSS 307 (398)
T ss_dssp EECHH-HHH-HHHHHHHTTCCCCGGGCHHHHH--HHHT-TTCCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred EECHH-HHH-HhhcccccCCCCCcEEehHHHh--hhcc-cCCCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 87653 222 2210 12333211000 0000 00000 1111 11234556666665565 889999999999
Q ss_pred HHHHHHHHcCCCCc-----c----c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEE
Q 048643 400 KLFERLVASDKRVS-----P----S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYA 469 (506)
Q Consensus 400 ~~l~~~l~~~~~~~-----p----~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 469 (506)
+++.+.|++.|+++ | + +++|++.+.. ...++.+.|.++|+....+....+..+
T Consensus 308 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~L~~~gI~v~~g~~~~~~~~ 370 (398)
T 2fyf_A 308 QRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV-----------------DAGTVAKILRANGIVDTEPYRKLGRNQ 370 (398)
T ss_dssp HHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS-----------------CHHHHHHHHHHTTCBCCSCCTTTCSSE
T ss_pred HHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC-----------------CHHHHHHHHHHCCcEEecCcccCCCCE
Confidence 99999999887765 2 3 7777774210 134677777778875432211123468
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 470 MRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 470 lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+|+++. ..++++|+++++++|+++.++
T Consensus 371 iRis~~-~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 371 LRVAMF-PAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp EEEECC-TTSCHHHHHHHHHHHHHHHHT
T ss_pred EEEEec-CCCCHHHHHHHHHHHHHHHHh
Confidence 999995 467888999999999988654
No 109
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.86 E-value=6.8e-21 Score=193.30 Aligned_cols=315 Identities=11% Similarity=0.023 Sum_probs=209.1
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|.. .. .++++.+.+++.+.+|.+... ...++|+||++++..++.+...
T Consensus 41 v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-----~~i~~t~g~~~a~~~~~~~~~~---------- 103 (377)
T 3fdb_A 41 VLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP-----EWIFPIPDVVRGLYIAIDHFTP---------- 103 (377)
T ss_dssp HHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC----------
T ss_pred HHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-----HHEEEeCChHHHHHHHHHHhcC----------
Confidence 334444444332334443 33 788999999999998875432 3789999999999887776532
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP- 267 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp- 267 (506)
++..|+++..+|.++..+++..|. +++.+|.++ + +|+++|++++++.+ .+|+++.++|++|.+-|
T Consensus 104 -~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~--~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~~ 169 (377)
T 3fdb_A 104 -AQSKVIVPTPAYPPFFHLLSATQR---EGIFIDATG--G--INLHDVEKGFQAGA------RSILLCNPYNPLGMVFAP 169 (377)
T ss_dssp -TTCCEEEEESCCTHHHHHHHHHTC---CEEEEECTT--S--CCHHHHHHHHHTTC------CEEEEESSBTTTTBCCCH
T ss_pred -CCCEEEEcCCCcHhHHHHHHHcCC---EEEEccCCC--C--CCHHHHHHHhccCC------CEEEEeCCCCCCCCCCCH
Confidence 445677888999999999999999 999999975 2 99999999998643 37888889999999964
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccC-ccchhhhcCC--CCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhc
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACIC-PEFQHFIDGV--EGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLS 341 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~-~~~~~~~~gi--~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~ 341 (506)
+++|+++|++||+++++|++|+++..-. ..... +..+ ...+.+..+++|+++ ....+|++++.++.... .+.
T Consensus 170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~-~~~ 247 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAE-HWQ 247 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHH-HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHH-HHH
Confidence 7778888999999999999998754322 11111 1111 123366778999996 44668877776654432 232
Q ss_pred CCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---c-
Q 048643 342 TNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVAS-DKRVS---P- 414 (506)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~---p- 414 (506)
....+.. . ....+..+++...+ +.+.++++.++..++++++.+.|++ .|+++ |
T Consensus 248 ~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 307 (377)
T 3fdb_A 248 QLSPVIK------------------D--GASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQ 307 (377)
T ss_dssp HSCHHHH------------------C--CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCS
T ss_pred HHHHhhc------------------C--CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCC
Confidence 1111100 0 01223333333333 3566788899999999999999988 78887 3
Q ss_pred -ceE-EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-EC--CEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 -SAV-MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-CG--GIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 -~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~--g~~~lR~~~~~~~tt~edi~~li 488 (506)
+.+ .+.+..... ..++.+.+.++ |+. +.+.. +. +..++|++++ +++++|++++
T Consensus 308 ~~~~~~~~~~~~~~-----------------~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~~Ris~~---~~~e~i~~~l 366 (377)
T 3fdb_A 308 ATYLMWIDFRDTTI-----------------EGSPSEFFIEKAKVA-MNDGAWFGEDGTGFCRLNFA---TSREVLEEAI 366 (377)
T ss_dssp BCSEEEEECTTSCC-----------------CSCHHHHHHHHHCEE-CEEGGGGCGGGTTEEEEECC---SCHHHHHHHH
T ss_pred eeEEEEEECcccCC-----------------CHHHHHHHHHhCCEE-ecCChhccCCCCCEEEEEeC---CCHHHHHHHH
Confidence 444 455543210 12344455444 764 44432 22 3578999986 3788999999
Q ss_pred HHHHHHHHH
Q 048643 489 TMVQEQLEA 497 (506)
Q Consensus 489 ~~l~~~~~~ 497 (506)
+.|+++.++
T Consensus 367 ~~l~~~l~~ 375 (377)
T 3fdb_A 367 DRMAKAVSH 375 (377)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999887653
No 110
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.86 E-value=7.5e-20 Score=184.94 Aligned_cols=282 Identities=13% Similarity=0.086 Sum_probs=197.1
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+++++++|.+.+ ..++|+||++++..++.+... ++..|+++..+|.++...++..|.
T Consensus 69 ~lr~~la~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~g~-- 128 (365)
T 3get_A 69 ELKSTLAQKYKVQNE-------NIIIGAGSDQVIEFAIHSKLN-----------SKNAFLQAGVTFAMYEIYAKQCGA-- 128 (365)
T ss_dssp HHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC-----------TTCEEEECSSCCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHHhC-----------CCCEEEEeCCChHHHHHHHHHcCC--
Confidence 344667777887654 789999999999877766532 556788899999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHH--HhCCEEEeecccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAK--QFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~--~~g~~lhVDaA~gg~~~ 293 (506)
+++.+|++ ++++ +|+++|+++++++ +.+|+++.++|++|.+-|++++.++|+ ++|+++++|++|+.+..
T Consensus 129 -~~~~v~~~-~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~ 199 (365)
T 3get_A 129 -KCYKTQSI-THNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFAS 199 (365)
T ss_dssp -EEEECSSS-SCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHH
T ss_pred -EEEEEecC-CCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhc
Confidence 99999982 2368 9999999998743 447888899999999999999998888 77999999999986542
Q ss_pred --cCc---cchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 294 --ICP---EFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 294 --~~~---~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
... ....... ....+.+..++||+++ ....+|++++ +++.. ..+...... ++
T Consensus 200 ~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~-~~~~~~~~~----------------~~--- 257 (365)
T 3get_A 200 FKDSKKHLEPCELIK-EFDNVLYLGTFSKLYGLGGLRIGYGIA-NANII-SAFYKLRAP----------------FN--- 257 (365)
T ss_dssp HHCGGGCCCHHHHHH-HCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHH-HHHHHHSCT----------------TC---
T ss_pred ccCCcccccHhHHhc-cCCCEEEEeecchHhcCcchheEEEEc-CHHHH-HHHHHhcCC----------------CC---
Confidence 111 0111111 1145577789999997 4567888887 44332 222110000 00
Q ss_pred CCCCCchHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHH
Q 048643 368 SRRFRSLKLWLVIRNY-GVANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 368 sr~~~al~~~~~l~~~-G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
...+..++....+ ..+.++++.++..++++++.+.|++. +++ | +.+.+++...
T Consensus 258 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~----------------- 316 (365)
T 3get_A 258 ---VSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKIIDSYTNFITYFFDEK----------------- 316 (365)
T ss_dssp ---SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSEEEEECSSS-----------------
T ss_pred ---cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCCCCeEEEEECCCC-----------------
Confidence 1223333333333 23668888899999999999999988 776 3 6666665431
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
...++.+.|.++|+. +.+....+..++|+++. +++++++++++|+++.
T Consensus 317 -~~~~~~~~l~~~gi~-v~~g~~~~~~~iRis~~----~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 -NSTDLSEKLLKKGII-IRNLKSYGLNAIRITIG----TSYENEKFFTEFDKIL 364 (365)
T ss_dssp -CHHHHHHHHHTTTEE-CEECGGGTCSEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHCCEE-EEECccCCCCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 134667777777764 44432222678999984 7789999999998764
No 111
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.86 E-value=4.8e-21 Score=196.36 Aligned_cols=304 Identities=11% Similarity=0.092 Sum_probs=198.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..+...++|+.+++++++++|.+. ..+++++||+|+..++.++.. ++..|+++...|.++.
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~--------~~i~~~sGt~a~~~a~~~~~~-----------~gd~Vl~~~~~~~~~~ 123 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEH--------ANVQPHSGAQANMAVYFTVLE-----------HGDTVLGMNLSHGGHL 123 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSE--------EECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCT
T ss_pred cchHHHHHHHHHHHHHHHHhCCCc--------eEEEecCcHHHHHHHHHHhcC-----------CCCEEEEecccccchh
Confidence 346678899889999999999874 335555669999888877632 4566777888887664
Q ss_pred H-H--HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEE
Q 048643 206 K-A--AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 282 (506)
Q Consensus 206 k-a--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~l 282 (506)
. + +...|.+ -+++.+++++ .++.+|+++|++++++.. +.+|+++ + +..|...|+++|+++|++||+|+
T Consensus 124 ~~~~~~~~~g~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~~-~-~~~~~~~~l~~i~~l~~~~~~~l 194 (405)
T 2vi8_A 124 THGSPVNFSGVQ-YNFVAYGVDP-ETHVIDYDDVREKARLHR-----PKLIVAA-A-AAYPRIIDFAKFREIADEVGAYL 194 (405)
T ss_dssp TTTCTTSHHHHH-SEEEEECBCT-TTCSBCHHHHHHHHHHHC-----CSEEEEC-C-SSCCSCCCHHHHHHHHHHHTCEE
T ss_pred cccchhhhccce-eEEEeccccc-ccCCcCHHHHHHHHHhcC-----CeEEEEe-C-CCCCccCCHHHHHHHHHHcCCEE
Confidence 3 1 1222321 0566677653 257899999999997631 2245442 2 44577789999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccCCCccCCC
Q 048643 283 HVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTN-PEYLKNKATESKQVVDYK 361 (506)
Q Consensus 283 hVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~ 361 (506)
|+|++|+.+....+... .+++.+|.++.++||+++.|.| |+++++ +.. .+.+... ..+..
T Consensus 195 i~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~-~~~l~~~~~~~~~------------- 255 (405)
T 2vi8_A 195 MVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQF-AKQIDKAIFPGIQ------------- 255 (405)
T ss_dssp EEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHH-HHHHHHHHTTTTC-------------
T ss_pred EEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHH-HHHHHhhhccccc-------------
Confidence 99999985433222111 1234689999999999998887 888876 332 2223210 01100
Q ss_pred CccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecCCCcccccccc
Q 048643 362 DWQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 362 ~~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~~~~~~~~~~ 433 (506)
++... ....+..+++.+..++++++.++..++++++.+.|++. +++ | +++.+++...+
T Consensus 256 -----~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-------- 321 (405)
T 2vi8_A 256 -----GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQ-------- 321 (405)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------
T ss_pred -----CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCCC--------
Confidence 11111 11233445555445688899999999999999999987 776 3 55666664210
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeee-------ECCEEEEEEEecCC---CCCHHHHHHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTHAV-------CGGIYAMRFAVGAT---LTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------~~g~~~lR~~~~~~---~tt~edi~~li~~l~~~~~~l~ 499 (506)
.....+.+.|.+.|+. +.+.. ..+..++|+++..+ ..++++++++++.|+++.+++.
T Consensus 322 --------~~~~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 322 --------LTGKTAEKVLDEVGIT-VNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp --------CCHHHHHHHHHHHTEE-CEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred --------CCHHHHHHHHHHcCce-eccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 0023456666667864 44321 11345799998532 4578999999999999876554
No 112
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.86 E-value=9.8e-20 Score=186.62 Aligned_cols=294 Identities=13% Similarity=0.099 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGI 213 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~ 213 (506)
..++.+.+++++|.+. ..+++ +|+++|+.++.+.... . ++..|+++...|.++..+++..|.
T Consensus 93 ~~~l~~~la~~~~~~~--------~i~~~-sG~~a~~~~~~~l~~~--~-------~gd~Vl~~~~~~~~~~~~~~~~g~ 154 (401)
T 2bwn_A 93 HRRLEAEIAGLHQKEA--------ALVFS-SAYNANDATLSTLRVL--F-------PGLIIYSDSLNHASMIEGIKRNAG 154 (401)
T ss_dssp HHHHHHHHHHHTTCSE--------EEEES-CHHHHHHHHHHHHHHH--S-------TTCEEEEETTCCHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCCCc--------EEEEC-CcHHHHHHHHHHHhcC--C-------CCCEEEECchhhHHHHHHHHHcCC
Confidence 3445566777777642 44554 4556887776654221 0 456788889999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccc
Q 048643 214 DLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 214 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~ 293 (506)
+++.+|.+ |+++|++++++... ..+.+|+++.+++++|.+.|+++|+++|++||+++++|++|+.+.+
T Consensus 155 ---~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~ 222 (401)
T 2bwn_A 155 ---PKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMY 222 (401)
T ss_dssp ---CEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred ---eEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccccccc
Confidence 99999863 78999998875311 2356889999999999999999999999999999999999984432
Q ss_pred cCccchhh--hcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCC
Q 048643 294 ICPEFQHF--IDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSR 369 (506)
Q Consensus 294 ~~~~~~~~--~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 369 (506)
.+..... ..++ +..|.+..+++|+++.|- |+++.+ +.. .+.+.. ...+.... .+.
T Consensus 223 -~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~~-~~~-~~~l~~~~~~~~~~~----------------~~~ 281 (401)
T 2bwn_A 223 -GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAAS-ARM-VDAVRSYAPGFIFST----------------SLP 281 (401)
T ss_dssp -STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEEC-HHH-HHHHHHHCHHHHTSB----------------CCC
T ss_pred -CCCCceeeeccCccccCcEEEeechhhccCCC--CEEecC-HHH-HHHHHHhCcCceecC----------------CCC
Confidence 1111111 1122 246788889999998753 666553 332 222211 11111100 011
Q ss_pred CCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHH
Q 048643 370 RFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFN 444 (506)
Q Consensus 370 ~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (506)
......+..+++.+...++.++.++..++++++.+.|++. +++ | ++++|++.. ....
T Consensus 282 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-----------------~~~~ 343 (401)
T 2bwn_A 282 PAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDHGSHIVPVVIGD-----------------PVHT 343 (401)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSSCEEEECCC-----------------HHHH
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCeEEEEeCC-----------------hHHH
Confidence 1123344566766666677889999999999999999887 776 3 677777632 1123
Q ss_pred HHHHHHHH-hcCcEEEeeeeE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 445 RELLESIN-ASGKAYMTHAVC----GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 445 ~~l~~~l~-~~g~~~~~~~~~----~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.++.+.|. +.|+. +.+... .+..++|+++. ..++++||++++++|+++.+++
T Consensus 344 ~~~~~~L~~~~gi~-v~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 344 KAVSDMLLSDYGVY-VQPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHHHHHCEE-CCEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhcCCEE-EeecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHhc
Confidence 56677775 56764 443322 24468999995 5668889999999999886543
No 113
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.86 E-value=2.9e-20 Score=191.26 Aligned_cols=304 Identities=10% Similarity=0.051 Sum_probs=189.5
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
...+...++|+.+.+++++++|.+.. . +++++||+|+..++.++.. ++..|+++..+|.++
T Consensus 64 ~~~~~~~~~~~~~~~~la~~~g~~~~-------~-i~~~sGt~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~ 124 (417)
T 3n0l_A 64 GGCEFVDEIETLAIERCKKLFNCKFA-------N-VQPNSGSQANQGVYAALIN-----------PGDKILGMDLSHGGH 124 (417)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTCSEE-------E-CCCSSHHHHHHHHHHHHSC-----------TTCEEEEECC-----
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCCc-------c-eEeccHHHHHHHHHHHhcC-----------CCCEEEecccccccc
Confidence 34456678999999999999998653 2 4445558999888776633 566788888888776
Q ss_pred HH---HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 205 QK---AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 205 ~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
.. .+...|.+. .++.++++ +++.+|+++|++++++.. +.+|+.+.++ +|.+.|+++|+++|++||++
T Consensus 125 ~~~~~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~ 194 (417)
T 3n0l_A 125 LTHGAKVSSSGKMY-ESCFYGVE--LDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFREIADEIGAY 194 (417)
T ss_dssp -----------CCS-EEEEECCC--TTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCE
T ss_pred cchhhhhhhhccee-eeEeccCC--CCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHHHHHHcCCE
Confidence 55 334445411 34455555 467899999999998431 3366666655 49999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (506)
+++|++|+.+.......... +..+|.++.++||++..|. +|+++.+++.... .+.. ....
T Consensus 195 li~Dea~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~-~~~~---~~~~------------ 254 (417)
T 3n0l_A 195 LFADIAHIAGLVVAGEHPSP---FPYAHVVSSTTHKTLRGPR-GGIIMTNDEELAK-KINS---AIFP------------ 254 (417)
T ss_dssp EEEECTTTHHHHHTTSSCCC---TTTCSEEEEESSTTTCSCS-CEEEEESCHHHHH-HHHH---HHTT------------
T ss_pred EEEECccchhhhhcccCCCc---cccceEEEeeCccccCCCC-eeEEEECCHHHHH-HHhh---hhCC------------
Confidence 99999986554433221111 2368999999999997776 4888777554332 2211 0000
Q ss_pred CccccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c-----ceEEEeecCCCcccccccc
Q 048643 362 DWQITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P-----SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 362 ~~~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p-----~~v~f~~~~~~~~~~~~~~ 433 (506)
+..++.. .....+..++.....+++.++.++..++++++.+.|.+ .+++ + +++.+.+.+.+.
T Consensus 255 --~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~------- 324 (417)
T 3n0l_A 255 --GIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDREF------- 324 (417)
T ss_dssp --TTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSS-------
T ss_pred --cccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCCC-------
Confidence 0001111 11123445555545577889999999999999999998 4676 1 455555543210
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeee-------ECCEEEEEEEecC---CCCCHHHHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTHAV-------CGGIYAMRFAVGA---TLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------~~g~~~lR~~~~~---~~tt~edi~~li~~l~~~~~~ 497 (506)
....+.+.|.+.|+. +.+.. ......+|+++.. ...++++|+++++.|+++.++
T Consensus 325 ---------~~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 325 ---------SGKDADLALGNAGIT-ANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp ---------CHHHHHHHHHHTTEE-CEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred ---------CHHHHHHHHHHcCeE-EeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 123455666666764 33221 1123568998742 224688999999999887654
No 114
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.86 E-value=3.2e-20 Score=187.52 Aligned_cols=300 Identities=10% Similarity=0.003 Sum_probs=191.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHH--
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCAL-- 204 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~-- 204 (506)
+|...++.+++.+++++++|.+.+. ...++|+|||+++..++.+... ++..|++....|++.
T Consensus 44 ~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~t~g~t~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~ 107 (362)
T 2c0r_A 44 GAVYEAVHNEAQARLLALLGNPTGY-----KVLFIQGGASTQFAMIPMNFLK-----------EGQTANYVMTGSWASKA 107 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSSE-----EEEEESSHHHHHHHHHHHHHCC-----------TTCEEEEEECSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCCchHHHHHHHHhcCC-----------CCCeEEEEecCcHhHHH
Confidence 5666777788999999999997531 0246778999999877765432 444555554566653
Q ss_pred HHHHHHhCCCCCCeEEEecCCC--CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-cChhHHHHHHHHhCCE
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKS--SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIW 281 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~--~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-dpl~~I~~ia~~~g~~ 281 (506)
...++..| +++.+|++.+ .+..+|.+.++ +++ .+.+|+++.++|+||.+ .|+++| +|+|
T Consensus 108 ~~~~~~~g----~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~~ 169 (362)
T 2c0r_A 108 LKEAKLIG----DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSVP 169 (362)
T ss_dssp HHHHHHHS----CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC------TTSC
T ss_pred HHHHHHhC----CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc------CCCE
Confidence 35555554 5778887621 11235665553 322 35688999999999995 899987 8999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 361 (506)
+|||++|+.+....+ +...|.++.++|||++ |.|+|++++++... +.+....+++..... .....
T Consensus 170 vivD~a~~~~~~~~~--------~~~~d~~~~s~~K~~g-~~G~G~l~~~~~~~--~~l~~~~~~~~~~~~--~~~~~-- 234 (362)
T 2c0r_A 170 LIGDMSSDILSRPFD--------LNQFGLVYAGAQKNLG-PSGVTVVIVREDLV--AESPKHLPTMLRYDT--YVKNN-- 234 (362)
T ss_dssp EEEECTTTTTSSCCC--------GGGCSEEEEETTTTTC-CSSCEEEEEEGGGS--SSCCTTSCGGGCHHH--HHHTT--
T ss_pred EEEEChhhccCCccc--------hhHCcEEEEecccccc-CcCcEEEEEcHHHH--hhccccCchHHhHHH--Hhhcc--
Confidence 999999976543221 2234999999999996 77899999875421 222211112110000 00000
Q ss_pred CccccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCCC-c-------c--ceEEEeecCCCcccc
Q 048643 362 DWQITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKRV-S-------P--SAVMDKLKPKYENCH 429 (506)
Q Consensus 362 ~~~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~-~-------p--~~v~f~~~~~~~~~~ 429 (506)
...++-. .....+..+++.+... +++++.++..++++++.+.|++.+++ + + .+++|++..
T Consensus 235 --~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 306 (362)
T 2c0r_A 235 --SLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS------ 306 (362)
T ss_dssp --TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC------
T ss_pred --CcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC------
Confidence 0011111 1224555666655454 78999999999999999999998535 4 1 567776632
Q ss_pred cccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 430 SQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.....++.+.|.+.|++ +.+... ....+|+++. ..++++|++++++.|+++.++
T Consensus 307 -----------~~~~~~~~~~L~~~gi~-~~~g~~-~~~~iRis~~-~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 307 -----------EELEKEFVKASEQEGFV-GLKGHR-SVGGLRASIY-NAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp -----------HHHHHHHHHHHHHTTEE-SCBCCT-TTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred -----------cchHHHHHHHHHHCCCe-eccCCC-CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 11235677777788874 333211 1246999996 456688999999999988764
No 115
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.85 E-value=1.5e-19 Score=183.51 Aligned_cols=312 Identities=11% Similarity=0.007 Sum_probs=208.2
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 107 GFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
..+.+.+...+ .....|.......++++++.+|+.+.+|.+.+. ...++|+||++++..++.+...
T Consensus 39 ~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~~~~-------- 104 (376)
T 3ezs_A 39 KFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKE-----NELISTLGSREVLFNFPSFVLF-------- 104 (376)
T ss_dssp HHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCG-----GGEEEESSSHHHHHHHHHHHTT--------
T ss_pred HHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEECcCcHHHHHHHHHHHcC--------
Confidence 44555555554 223344444456899999999999999984221 2789999999999888776543
Q ss_pred cCCC--CeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 187 ENIS--KLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 187 ~~~~--~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
+ +..|+++..+|.++..+++..|. +++.+|.++++ .+++ +|++++.+.++ +|+++.++|++|.
T Consensus 105 ---~~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~--~~~~-~l~~~~~~~~~------~v~~~~p~nptG~ 169 (376)
T 3ezs_A 105 ---DYQNPTIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKEN--DFTP-SLNEKELQEVD------LVILNSPNNPTGR 169 (376)
T ss_dssp ---TCSSCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGG--TSCC-CCCHHHHHHCS------EEEECSSCTTTCC
T ss_pred ---CCCCCEEEEecCCcHhHHHHHHHcCC---EEEEcccCCCC--Ccch-hHHhhhccCCC------EEEEcCCCCCcCC
Confidence 4 66788889999999999999999 99999987643 4555 77777776433 6777889999999
Q ss_pred ccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcC-------CCCCCeeEEcCccccC-CCCcceEEEEeCc
Q 048643 265 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDG-------VEGADSFSLNAHKWFF-TTLDCCCLWVKDP 333 (506)
Q Consensus 265 idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~g-------i~~aDsi~~~~hK~l~-~p~~~g~~~~r~~ 333 (506)
+-| +++|+++|++||+++++|++|+.+..-. ........ ....+.+..+++|+++ ....+|+++. ++
T Consensus 170 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~ 247 (376)
T 3ezs_A 170 TLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAG-DS 247 (376)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEE-CH
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccceeEEEee-CH
Confidence 966 7778888999999999999998754322 11111100 1256677889999996 5567888776 33
Q ss_pred hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 048643 334 SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRV 412 (506)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 412 (506)
... +.+.....+. +.....+..+++...+. .+.++++.++..++.+++.+.|+ ++
T Consensus 248 ~~~-~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---~~ 303 (376)
T 3ezs_A 248 RLL-EKYKAFRAYL--------------------GYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK---NT 303 (376)
T ss_dssp HHH-HHHHHHHTTT--------------------CCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---TC
T ss_pred HHH-HHHHHHHhhh--------------------cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---CC
Confidence 322 2221100000 00012233333333332 34577888888889999999887 55
Q ss_pred c-c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE----CCEEEEEEEecCCCCCHHH
Q 048643 413 S-P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC----GGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 413 ~-p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~----~g~~~lR~~~~~~~tt~ed 483 (506)
. | ..+.+++. . ..++.+.|.+ .|+....+..+ .+..++|++++. ++++
T Consensus 304 ~~~~~~~~~~~~~~-~-------------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~---~~~~ 360 (376)
T 3ezs_A 304 LIYPYSFYVYLPVQ-N-------------------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY---DTPL 360 (376)
T ss_dssp CCCSBSSEEEEECS-C-------------------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS---CHHH
T ss_pred CCCCcceEEEEECC-C-------------------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC---CHHH
Confidence 5 4 44555553 2 2455666665 68754333222 245789999853 7889
Q ss_pred HHHHHHHHHHHHH
Q 048643 484 VMVAWTMVQEQLE 496 (506)
Q Consensus 484 i~~li~~l~~~~~ 496 (506)
|+++++.|+++.+
T Consensus 361 i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 361 LEKPLEIIETYRE 373 (376)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 116
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.85 E-value=1.6e-19 Score=190.56 Aligned_cols=328 Identities=11% Similarity=0.037 Sum_probs=210.4
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCC-CCeEEEeCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLK-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI-SKLVVYGSD 198 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~-~~~~v~~s~ 198 (506)
...|..+.+..++++++.+|+++..| ++.+. ...++|+|+++++..++.+.... |. ++..|+++.
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~-----~~i~~t~G~~~ai~~~~~~l~~~--------gd~~~d~Vlv~~ 188 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADP-----DNIYLTTGASDGISTILKILVSG--------GGKSRTGVMIPI 188 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCG-----GGEEEESSHHHHHHHHHHHHCCC--------CGGGSEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC--------CCCCCCEEEEeC
Confidence 34577777788999999999999985 65331 37899999999988776654321 10 235888999
Q ss_pred CCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHH
Q 048643 199 QTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVA 275 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia 275 (506)
..|.++..+++.+|. +++.++++++++|.+|+++|+++|++... +..+.+|+++.++|+||.+ +++++|+++|
T Consensus 189 p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la 264 (498)
T 3ihj_A 189 PQYPLYSAVISELDA---IQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA 264 (498)
T ss_dssp SCCTHHHHHHHHTTC---EEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHcCC---EEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHH
Confidence 999999999999999 99999998766789999999999987532 2235678888999999999 5578899999
Q ss_pred HHhCCEEEeecccccccccCc----cchhhhcCC-----CCCCee-EEcCccccC--CCCcceEEEE--eCchhHHhhhc
Q 048643 276 KQFGIWVHVDAAYAGSACICP----EFQHFIDGV-----EGADSF-SLNAHKWFF--TTLDCCCLWV--KDPSALVSSLS 341 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~----~~~~~~~gi-----~~aDsi-~~~~hK~l~--~p~~~g~~~~--r~~~~l~~~~~ 341 (506)
++||+++++|.+|+.+..-.. ........+ .....+ ..+++|.+. ....+|++.+ .++... ..+.
T Consensus 265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~-~~l~ 343 (498)
T 3ihj_A 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIK-GQLV 343 (498)
T ss_dssp HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHH-HHHH
T ss_pred HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHH-HHHH
Confidence 999999999999976544211 112111111 012233 457899994 5567888775 444332 2221
Q ss_pred CC-ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc------------hhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 342 TN-PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG------------VANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 342 ~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G------------~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
.. ..++ ++ ..+..++....+. .+...++.++..++++++.+.|++
T Consensus 344 ~~~~~~~-------------------~~---~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 401 (498)
T 3ihj_A 344 KLLSVRL-------------------CP---PVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ 401 (498)
T ss_dssp HHHHHSC-------------------CC---CHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhccC-------------------CC---CHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 10 0111 00 1122222222221 122345667788899999999999
Q ss_pred CCCCc---c--ceEEE-eecCCCcccccccccchHHH---HHHHHHH--HHHHHHhcCcEEEeeeeE---CCEEEEEEEe
Q 048643 409 DKRVS---P--SAVMD-KLKPKYENCHSQQLVTEEEA---INEFNRE--LLESINASGKAYMTHAVC---GGIYAMRFAV 474 (506)
Q Consensus 409 ~~~~~---p--~~v~f-~~~~~~~~~~~~~~~~~~~~---~~~~~~~--l~~~l~~~g~~~~~~~~~---~g~~~lR~~~ 474 (506)
+|+++ | +++.| ++..+. ...+. .+..... +.+.+.+.|+..+.+..+ .+..++|+++
T Consensus 402 ~~g~~~~~p~gg~~~~~~l~~p~---------~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~ 472 (498)
T 3ihj_A 402 VPGIHCNPLQGAMYAFPRIFIPA---------KAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI 472 (498)
T ss_dssp STTEECCCCCBSSEECCEECCCH---------HHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC
T ss_pred CCCcEecCCCeEEEEEEeccCch---------hhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe
Confidence 98887 4 55555 343220 00000 0000112 344455668755443322 3567899999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 475 GATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 475 ~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
. .++++++++++.|.++.++..+
T Consensus 473 ~---~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 473 L---PPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp C---SCHHHHHHHHHHHHHHHHHHHH
T ss_pred C---CCHHHHHHHHHHHHHHHHHHHH
Confidence 4 5788999999999999887654
No 117
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.85 E-value=2e-20 Score=191.87 Aligned_cols=281 Identities=15% Similarity=0.176 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH--
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA-- 208 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~-- 208 (506)
.....++.+++++++|.+ ..+++++|++|+..++.++.. ++..|+++...|.++...+
T Consensus 63 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~ 122 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGE---------AGLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYGCTHAFLSH 122 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHHH
Confidence 345556678888888875 346777788999888876632 5567888899999988876
Q ss_pred --HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 209 --QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 209 --~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
+..|. +++.+|.+ |+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus 123 ~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 186 (398)
T 2rfv_A 123 SMPKFGI---NVRFVDAA-------KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDN 186 (398)
T ss_dssp HHHHTTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCC---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence 77888 88888863 789999988653 4588889999999999999999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
+|+.+....+ . . . ++|.++.++||+++.|.. +|++++++. .+...+.. +...
T Consensus 187 ~~~~~~~~~~-~-~----~-~~di~~~s~sK~~~~~g~~~~G~~~~~~~-~~~~~~~~---~~~~--------------- 240 (398)
T 2rfv_A 187 TFMSPYCQQP-L-Q----L-GADIVVHSVTKYINGHGDVIGGIIVGKQE-FIDQARFV---GLKD--------------- 240 (398)
T ss_dssp TTTCTTTCCG-G-G----G-TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHT---HHHH---------------
T ss_pred CCcccccCCc-h-h----h-CCcEEEEeCcccccCCCCceEEEEEECHH-HHHHHHHH---HHHh---------------
Confidence 9986654322 1 1 1 589999999999998876 588877653 22212211 1100
Q ss_pred ccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC--------------CCc---c------ceEEEee
Q 048643 365 ITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK--------------RVS---P------SAVMDKL 421 (506)
Q Consensus 365 ~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~--------------~~~---p------~~v~f~~ 421 (506)
.. +-....+..|+.++.+ +.+...+++..++++++.+.|++.+ +++ | ++++|.+
T Consensus 241 ~~-~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~ 317 (398)
T 2rfv_A 241 IT-GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEI 317 (398)
T ss_dssp TT-CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred CC-CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence 00 0012345566666655 3345556667777888888887642 222 1 6677766
Q ss_pred cCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee----------------------ECC--EEEEEEEecCC
Q 048643 422 KPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV----------------------CGG--IYAMRFAVGAT 477 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----------------------~~g--~~~lR~~~~~~ 477 (506)
.+. .....++.+++...|. .++.+. ..| ..++|+++. .
T Consensus 318 ~~~----------------~~~~~~l~~~~~~~~i-~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~-~ 379 (398)
T 2rfv_A 318 AGG----------------LEAGRRMINSVELCLL-AVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVG-L 379 (398)
T ss_dssp TTH----------------HHHHHHHHTTCSSSEE-CSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECC-S
T ss_pred cCC----------------HHHHHHHHHhCCccee-ccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEec-C
Confidence 431 1223445554433332 222110 012 478999995 5
Q ss_pred CCCHHHHHHHHHHHHHH
Q 048643 478 LTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~ 494 (506)
.+++++|+++.++|+++
T Consensus 380 ~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 380 EDPEDIINDLEHAIRKA 396 (398)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhh
Confidence 78888999999998764
No 118
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.4e-21 Score=198.20 Aligned_cols=339 Identities=11% Similarity=0.041 Sum_probs=216.6
Q ss_pred HHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhh
Q 048643 106 AGFLGEMLSSGFNV-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 184 (506)
Q Consensus 106 ~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~ 184 (506)
+..+.+.+...+.. ....|....+..++++++.+|+.+.+|.+.+. ...++|+||++|+..++.++.+
T Consensus 72 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~G~~~al~~~~~~l~~------ 140 (447)
T 3b46_A 72 PQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA-----ENVTVTTGANEGILSCLMGLLN------ 140 (447)
T ss_dssp CHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG-----GGEEEESHHHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHHcC------
Confidence 34555666665554 22345555567899999999999988875431 2689999999999888877643
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCC----------CcccCHHHHHHHHHHHHhcCCccEEEE
Q 048643 185 GRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSS----------SYGLSPDSLLTQINLDVEAGLVPLFLC 254 (506)
Q Consensus 185 ~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~----------~~~~d~~~L~~~i~~~~~~g~~p~~Vv 254 (506)
++..|+++...|.++..+++..|. +++.+|+++++ ++.+|+++|++++++. +.+|+
T Consensus 141 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~ 206 (447)
T 3b46_A 141 -----AGDEVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAVI 206 (447)
T ss_dssp -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEEE
T ss_pred -----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEEE
Confidence 556788888999999999999999 99999987532 4689999999988632 44778
Q ss_pred EeccCCCCCcc---cChhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEcCccccC-CCCcceEE
Q 048643 255 ATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCL 328 (506)
Q Consensus 255 ~t~gtt~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~--~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~ 328 (506)
++.++|++|.+ +++++|+++|++||+++++|++|+.+..-.+ .......+....|.+..++||+++ ..+.+|++
T Consensus 207 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~ 286 (447)
T 3b46_A 207 INTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWV 286 (447)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEE
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEE
Confidence 88999999998 5799999999999999999999987543111 111110111257888999999998 44568998
Q ss_pred EEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHH
Q 048643 329 WVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVA 407 (506)
Q Consensus 329 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~ 407 (506)
+++++... +.+.....+.. + +.-......+..+|.... .+.++++.++..++++++.+.|+
T Consensus 287 ~~~~~~l~-~~l~~~~~~~~--------------~---~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 348 (447)
T 3b46_A 287 LSLNAELL-SYAAKAHTRIC--------------F---ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFD 348 (447)
T ss_dssp ECSCHHHH-HHHHHHHHHHT--------------S---SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCHHHH-HHHHHHHhhcc--------------C---CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 88444433 22211000000 0 000001112223343322 34577888889999999999998
Q ss_pred cCCCCc---c---ceEEEeecCCCcccccccccchHH-HHHHHHHHHHHHHH-hcCcEEEeeeeEC-------CEEEEEE
Q 048643 408 SDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEE-AINEFNRELLESIN-ASGKAYMTHAVCG-------GIYAMRF 472 (506)
Q Consensus 408 ~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~-~~g~~~~~~~~~~-------g~~~lR~ 472 (506)
+. +++ | ..+.+.+..... +........ .......++.+.|. +.|+....+..+. +..++|+
T Consensus 349 ~~-g~~~~~~~~g~~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRl 424 (447)
T 3b46_A 349 EL-GLPYTAPEGTYFVLVDFSKVKI---PEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRF 424 (447)
T ss_dssp HH-TCCEECCSBSSEEEEECTTCCC---CTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEE
T ss_pred HC-CCeecCCCeeEEEEEecccccC---ccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEE
Confidence 87 666 4 445555532100 000000000 00001245666665 4576443332221 2468999
Q ss_pred EecCCCCCHHHHHHHHHHHHHH
Q 048643 473 AVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 473 ~~~~~~tt~edi~~li~~l~~~ 494 (506)
++.. ++++|+++++.|+++
T Consensus 425 s~~~---~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 425 AVCK---DDAYLENAVERLKLL 443 (447)
T ss_dssp ECCS---CHHHHHHHHHHGGGG
T ss_pred EEeC---CHHHHHHHHHHHHHH
Confidence 9953 688999999988763
No 119
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.85 E-value=4.1e-20 Score=188.69 Aligned_cols=307 Identities=12% Similarity=0.072 Sum_probs=195.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
.++...++++. +++++|.+ .+++++||++|+..++.+++-. ++..|+++..+|.++.
T Consensus 37 ~~~~~~~l~~~----la~~~~~~---------~~~~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~ 93 (393)
T 1mdo_A 37 TGPKNQELEAA----FCRLTGNQ---------YAVAVSSATAGMHIALMALGIG----------EGDEVITPSMTWVSTL 93 (393)
T ss_dssp SSHHHHHHHHH----HHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCHHHH
T ss_pred CChHHHHHHHH----HHHHhCCC---------cEEEecChHHHHHHHHHHcCCC----------CCCEEEeCCCccHhHH
Confidence 34555556554 55566653 4789999999998888765211 5567888999999999
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
.+++..|+ +++.+|++++ ++.+|+++|++++++. +.+|+++ +++|.+.|+++|+++|++||+++++|
T Consensus 94 ~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D 160 (393)
T 1mdo_A 94 NMIVLLGA---NPVMVDVDRD-TLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYALGERYGIPVIED 160 (393)
T ss_dssp HHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEE
T ss_pred HHHHHCCC---EEEEEeccCC-cCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence 99999999 9999999853 4789999999998653 3355554 47899999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCc--cccCCCCcceEEEEeCchhHHhhh--cCCccccCCccccCCCccCCC
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSALVSSL--STNPEYLKNKATESKQVVDYK 361 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~--~~~~~yl~~~~~~~~~~~~~~ 361 (506)
++|+.+..... +.. +. .|.++.++| |++..+ .+|++++++++...... .....+... .. ......
T Consensus 161 ~a~~~g~~~~~--~~~--~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~--~~--~~~~~~ 229 (393)
T 1mdo_A 161 AAHATGTSYKG--RHI--GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDA--WD--RQSGGR 229 (393)
T ss_dssp CTTCTTCEETT--EET--TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC-------------
T ss_pred CccccCCeECC--eec--CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcccc--hh--hhcccc
Confidence 99985443321 111 11 899999999 999764 46777766554332211 111100000 00 000000
Q ss_pred Cccc---cCC--CCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---------c---ceEEEeecCC
Q 048643 362 DWQI---TLS--RRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---------P---SAVMDKLKPK 424 (506)
Q Consensus 362 ~~~~---~~s--r~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---------p---~~v~f~~~~~ 424 (506)
.+.. ..+ .+...+...+.+. ..+++++..++..++++++.+.|.+.+ ++ + .++++++.+.
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~a~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (393)
T 1mdo_A 230 APQAEVLAPGYKYNLPDLNAAIALA--QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEA 306 (393)
T ss_dssp --CCEESSCCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHH
T ss_pred cccccccccCccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEeccc
Confidence 0111 111 1223343333333 345678888889999999999999875 43 1 2466665420
Q ss_pred CcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC----------------------CEEEEEEEecCCCCCHH
Q 048643 425 YENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG----------------------GIYAMRFAVGATLTEER 482 (506)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----------------------g~~~lR~~~~~~~tt~e 482 (506)
.......++.+.|.+.|+. +.+.... +..++|+++ .+.++++
T Consensus 307 --------------~~~~~~~~l~~~l~~~gi~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~-~~~~t~~ 370 (393)
T 1mdo_A 307 --------------RCGITRDALMASLKTKGIG-TGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPL-FPDMTES 370 (393)
T ss_dssp --------------HHSSCHHHHHHHHHHTTBC-CBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECC-CTTCCHH
T ss_pred --------------ccccCHHHHHHHHHhCCCC-cccccCccccChhhhccCCccCChhHHHHHhCEEEecC-CCCCCHH
Confidence 0000134677777777874 3322110 123799998 4677889
Q ss_pred HHHHHHHHHHHHHHHH
Q 048643 483 HVMVAWTMVQEQLEAF 498 (506)
Q Consensus 483 di~~li~~l~~~~~~l 498 (506)
||++++++|+++.+..
T Consensus 371 ~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 371 DFDRVITALHQIAGQG 386 (393)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999876543
No 120
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.85 E-value=7.4e-20 Score=185.84 Aligned_cols=316 Identities=12% Similarity=0.065 Sum_probs=209.0
Q ss_pred HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+...+... ...|...+...++++.+.+|+.+.+|.+.+. ....++|+|+++++..++.+...
T Consensus 42 ~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~----~~~v~~~~g~~~a~~~~~~~l~~-------- 109 (376)
T 2dou_A 42 APLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP----RREALALIGSQEGLAHLLLALTE-------- 109 (376)
T ss_dssp HHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT----TTSEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CccEEEcCCcHHHHHHHHHHhcC--------
Confidence 3455555555332 2234433467889999999999988986321 01689999999999877766532
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|.++..+++..|. +++.+|.+ +++.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 110 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~--~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~ 175 (376)
T 2dou_A 110 ---PEDLLLLPEVAYPSYFGAARVASL---RTFLIPLR--EDGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAVA 175 (376)
T ss_dssp ---TTCEEEEESSCCHHHHHHHHHTTC---EEEEECBC--TTSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCCC
T ss_pred ---CCCEEEECCCCcHhHHHHHHHcCC---EEEEeeCC--CCCCCCHHHHHHhhccC------ceEEEECCCCCCcCccC
Confidence 456788888999999999999999 99999983 34679999999999654 34777788999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID--GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
| +++|+++|++||+++++|++|+++..-. .....+. +....+.+..+++|+++.| ..+|+++.+ ++.. +.+
T Consensus 176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~-~~l 252 (376)
T 2dou_A 176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS-EEAL-ARL 252 (376)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC-HHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC-HHHH-HHH
Confidence 6 7889999999999999999998764321 1111111 1123456778899999744 567887764 3332 222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
....... + .+ ...+...++...+ +.+.++++.++..++++++.+.|++. ++ |
T Consensus 253 ~~~~~~~----------------~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~ 310 (376)
T 2dou_A 253 ERVKGVI----------------D--FN--QYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPR 310 (376)
T ss_dssp HHHHHHH----------------C--CC--SCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCC
T ss_pred HHHHHhc----------------c--cC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCC
Confidence 1100000 0 00 0122223333333 34667888888899999999999886 55 3
Q ss_pred -c-eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 -S-AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 -~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
+ .+.+++.... ...++.+.|.++|+.......+. +..++|++++. ++++|+++++.
T Consensus 311 ~~~~~~~~~~~~~-----------------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~i~~~l~~ 370 (376)
T 2dou_A 311 ATMYLWGRLPEGV-----------------DDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR---PLEELLEAAKR 370 (376)
T ss_dssp BSSEEEEECCTTC-----------------CHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHH
T ss_pred eeEEEEEECCCCC-----------------CHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC---CHHHHHHHHHH
Confidence 3 4556654210 02457777777876433322221 34689999853 67899999998
Q ss_pred HHHH
Q 048643 491 VQEQ 494 (506)
Q Consensus 491 l~~~ 494 (506)
|+++
T Consensus 371 l~~~ 374 (376)
T 2dou_A 371 IREA 374 (376)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8765
No 121
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.85 E-value=1.7e-19 Score=181.89 Aligned_cols=281 Identities=11% Similarity=0.037 Sum_probs=194.9
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+++++++|.+.+ ..++|+||++++..++.++ ..|+++..+|.++..+++..|.
T Consensus 65 ~l~~~la~~~~~~~~-------~i~~~~g~t~al~~~~~~~---------------d~vi~~~~~~~~~~~~~~~~g~-- 120 (361)
T 3ftb_A 65 RLNKSIENYLKLKDI-------GIVLGNGASEIIELSISLF---------------EKILIIVPSYAEYEINAKKHGV-- 120 (361)
T ss_dssp HHHHHHHHHHTCCSC-------EEEEESSHHHHHHHHHTTC---------------SEEEEEESCCTHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCCCcc-------eEEEcCCHHHHHHHHHHHc---------------CcEEEecCChHHHHHHHHHcCC--
Confidence 344567777787654 6899999999998776654 2477788899999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeeccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
+++.+|++++ +.+++++|++++++ + .+|+++.++|++|.+-| +++|+++|++||+++++|++|+.+.
T Consensus 121 -~~~~~~~~~~--~~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 190 (361)
T 3ftb_A 121 -SVVFSYLDEN--MCIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFT 190 (361)
T ss_dssp -EEEEEECCTT--SCCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGT
T ss_pred -eEEEeecCcc--cCCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhc
Confidence 9999999863 47888999998865 3 37888899999999965 6778888889999999999997665
Q ss_pred ccC-ccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCC
Q 048643 293 CIC-PEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 293 ~~~-~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
.-. ...... .+....+.+..+++|+++ ....+|++++.++.... .+.....+ + .
T Consensus 191 ~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~-~~~~~~~~----------------~------~ 246 (361)
T 3ftb_A 191 GDPSSSFVGE-IKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAA-KIKAKQNP----------------W------N 246 (361)
T ss_dssp CCTTSSSGGG-TTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHH-HHHTTSCT----------------T------C
T ss_pred CCcccchhHh-cccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHH-HHHhhCCC----------------C------C
Confidence 420 001111 111123355668999997 44667888766665433 33211000 0 1
Q ss_pred CCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--ceEEEeecCCCcccccccccchHHHHHHH
Q 048643 371 FRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS----P--SAVMDKLKPKYENCHSQQLVTEEEAINEF 443 (506)
Q Consensus 371 ~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 443 (506)
...+..++....+. .++++++.++..++++++.+.|+++|+++ | +.+.+++....
T Consensus 247 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 308 (361)
T 3ftb_A 247 INCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENIS------------------ 308 (361)
T ss_dssp SCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESSSC------------------
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCCCC------------------
Confidence 12233444444442 45678888999999999999999988775 3 66777664310
Q ss_pred HHHHHHHHHhcCcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 444 NRELLESINASGKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 444 ~~~l~~~l~~~g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
..++.+.|.++|+. +.+.. + .+..++|+++. +++++++++++|+++.+.
T Consensus 309 ~~~l~~~l~~~gi~-v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 309 GEKLYDSLLKEDIV-IRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp HHHHHHHHHTTTEE-CEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCeE-EeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHhc
Confidence 34677778778764 44432 2 23578999984 677999999999988653
No 122
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.85 E-value=1.5e-19 Score=182.25 Aligned_cols=325 Identities=10% Similarity=0.020 Sum_probs=199.2
Q ss_pred CCCccccCCCCCCHHHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHH
Q 048643 92 SPNYFAYFPSSGSIAGFLGEMLSSGFN-VVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL 170 (506)
Q Consensus 92 ~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l 170 (506)
+..|+|.-+. +..+..+.+++..... .....|...|...++| +++++++|.+ ..+++++||+|+.
T Consensus 11 ~~~~l~~~~~-p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~----~~la~~~~~~---------~~i~~~~G~~a~~ 76 (357)
T 3lws_A 11 QTTGQISGHG-KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFE----QKFADVLGMD---------DAVFFPSGTMAQQ 76 (357)
T ss_dssp TCSEESSBSS-CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHH----HHHHHHHTCS---------EEEEESCHHHHHH
T ss_pred hhcccccCCC-CCCHHHHHHHHHHhhcccCcccccCChHHHHHH----HHHHHHhCCC---------cEEEecCcHHHHH
Confidence 3457776544 4455556666554221 1123344456555555 5677788874 3477788999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH---HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 048643 171 CTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK---AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAG 247 (506)
Q Consensus 171 ~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 247 (506)
.++.++...- .+.+|+++...|++..+ .+...|. +++.+|.+ ++.+|+++|+++.+
T Consensus 77 ~al~~~~~~g---------d~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~~------ 135 (357)
T 3lws_A 77 VALRIWSDET---------DNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGAA---DRLMTLDEIKALPD------ 135 (357)
T ss_dssp HHHHHHHHHH---------TCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSCT---TSCCCHHHHHTCCS------
T ss_pred HHHHHHhhcC---------CCcEEEecccceeeeeccchhhhccCc---EEEEecCC---CCCcCHHHHhcCcC------
Confidence 8888766531 22377888889988765 3455677 77777743 46899999998721
Q ss_pred CccEEEEEeccCCCC-CcccC---hhHHHHHHHHhCCEEEeecccccccc--cCccchhhhcCCCCCCeeEEcCccccCC
Q 048643 248 LVPLFLCATIGTTAI-TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFQHFIDGVEGADSFSLNAHKWFFT 321 (506)
Q Consensus 248 ~~p~~Vv~t~gtt~t-G~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~--~~~~~~~~~~gi~~aDsi~~~~hK~l~~ 321 (506)
+.+|+++.+++++ |.+-| +++|+++|++||+|+|+|+||+.... ......... ..+|.++.++||+++.
T Consensus 136 --~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~ 210 (357)
T 3lws_A 136 --IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLGG 210 (357)
T ss_dssp --CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTCC
T ss_pred --cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCCC
Confidence 3367888888887 88764 89999999999999999999862211 111122222 3689999999999988
Q ss_pred CCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHH
Q 048643 322 TLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKL 401 (506)
Q Consensus 322 p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~ 401 (506)
|.+ |+++. +++... .+.......... . +. . ...+.....+++. ..+.+++..+++++
T Consensus 211 ~~g-g~~~~-~~~~~~-~~~~~~~~~~~~---------~--~~---~-~~~~~~~~~~l~~-----~~~~~~~~~~~~~~ 267 (357)
T 3lws_A 211 IAG-AILAG-PAAFCQ-TARIWKRRYGGD---------L--IS---L-YPYIVSADYYYEL-----RKDRMGQYYEQAKQ 267 (357)
T ss_dssp SSC-EEEEE-CHHHHH-HHHHHHHHTTCC---------C--SC---C-HHHHHHHHHHHHH-----HTTCHHHHHHHHHH
T ss_pred Cce-EEEEc-CHHHHH-HHHHHHHHhcCC---------c--cc---c-hHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 877 66544 444332 221100000000 0 00 0 0001111222322 23344556778899
Q ss_pred HHHHHHcCCCCc----c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-CCEEEEEEE
Q 048643 402 FERLVASDKRVS----P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC-GGIYAMRFA 473 (506)
Q Consensus 402 l~~~l~~~~~~~----p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~ 473 (506)
+.+.|+++|+++ | +++.+++.... .....++.+.|.++|+........ .+..++|++
T Consensus 268 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~ 332 (357)
T 3lws_A 268 LAEQFNALPGVHTTPEVPVSNMFHLHFDGQA---------------ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEIS 332 (357)
T ss_dssp HHHHHHTSTTEEEESSSCSSSEEEEEEESCH---------------HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEE
T ss_pred HHHHHHhCCCCeeccCCCcceEEEEEecCCh---------------HHHHHHHHHHHHhcCeEEecccccCCCceEEEEE
Confidence 999999988876 3 77777765430 112356677777788743322111 467799999
Q ss_pred ecCCC--CCHHHHHHHHHHHHHH
Q 048643 474 VGATL--TEERHVMVAWTMVQEQ 494 (506)
Q Consensus 474 ~~~~~--tt~edi~~li~~l~~~ 494 (506)
+...+ .++++|++.++.|.+.
T Consensus 333 i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 333 VGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp BCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ecchhhhcCHHHHHHHHHHHHHh
Confidence 86443 5677888887777654
No 123
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.85 E-value=3.3e-20 Score=191.37 Aligned_cols=336 Identities=12% Similarity=0.056 Sum_probs=213.1
Q ss_pred HHHHHHHhhcCCC--CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 108 FLGEMLSSGFNVV--GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 108 ~~~~~l~~~~n~~--~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
.+.+.+...+... ...|.......++++.+.+|+.+.+|.+.+. ....++|+||++++..++.+...
T Consensus 45 ~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------- 113 (422)
T 3fvs_A 45 FAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD------- 113 (422)
T ss_dssp HHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCcEEEECChHHHHHHHHHHHcC-------
Confidence 3344444444332 1345444567889999999999999976431 01689999999999888776532
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCC----C------CCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTK----S------SSYGLSPDSLLTQINLDVEAGLVPLFLCA 255 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~----~------~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~ 255 (506)
++..|+++..+|.++...++..|. +++.+|.++ + .++.+|+++|++++++. +.+|++
T Consensus 114 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~ 180 (422)
T 3fvs_A 114 ----EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVL 180 (422)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEE
T ss_pred ----CCCEEEEcCCCchhhHHHHHHcCC---EEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEEE
Confidence 556678888899999999999999 999999875 2 25689999999988643 447888
Q ss_pred eccCCCCCccc---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccCCC-CcceEEE
Q 048643 256 TIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLW 329 (506)
Q Consensus 256 t~gtt~tG~id---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~~~g~~~ 329 (506)
+.++|++|.+- ++++|+++|++||+++++|++|+.+..-....... +......+.+..+++|+++.| ..+|+++
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~ 260 (422)
T 3fvs_A 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVL 260 (422)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEE
Confidence 89999999997 59999999999999999999998654321111111 111112346677889999744 6788887
Q ss_pred EeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh---------chhHHHHHHHHHHHHHH
Q 048643 330 VKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---------GVANLRHFLRSHVNMAK 400 (506)
Q Consensus 330 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------G~~g~~~~i~~~~~~a~ 400 (506)
.++. .. ..+....... .+ . ...+..+++...+ ..+.++++.++..++++
T Consensus 261 ~~~~-~~-~~~~~~~~~~--------------~~---~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (422)
T 3fvs_A 261 GPDH-IM-KHLRTVHQNS--------------VF---H---CPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRD 318 (422)
T ss_dssp CCHH-HH-HHHHHHHHTT--------------TC---C---CCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHH
T ss_pred eCHH-HH-HHHHHHHhhc--------------cC---C---CCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHH
Confidence 7543 22 2221100000 00 0 1122223333322 34678888899999999
Q ss_pred HHHHHHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE-------CC
Q 048643 401 LFERLVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC-------GG 466 (506)
Q Consensus 401 ~l~~~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~g 466 (506)
++.+.|++. +++ | ..+.+.+..... ...+. ..... .....++.+.+. +.|+....+..+ .+
T Consensus 319 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~ 393 (422)
T 3fvs_A 319 HMIRSLQSV-GLKPIIPQGSYFLITDISDFKR-KMPDL-PGAVD--EPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHF 393 (422)
T ss_dssp HHHHHHHTT-TCEEEBCSBSSEEEEECHHHHH-HCCCC-CCCTT--CCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTS
T ss_pred HHHHHHHHc-CCeecCCCeeeEEEEechhhcc-ccccc-ccccc--cccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCC
Confidence 999999988 776 4 344444322100 00000 00000 000234555544 357644333322 34
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 467 IYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 467 ~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
..++|++++. ++++|+++++.|+++.++
T Consensus 394 ~~~iRis~~~---~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 394 DHYIRFCFVK---DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CSEEEEECCC---CHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEecC---CHHHHHHHHHHHHHHHhh
Confidence 6899999854 888999999999987653
No 124
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.85 E-value=2.4e-20 Score=191.61 Aligned_cols=320 Identities=9% Similarity=0.001 Sum_probs=210.8
Q ss_pred HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcc
Q 048643 108 FLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 186 (506)
Q Consensus 108 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~ 186 (506)
.+.+.+...+... ...|...+...++++.+.+|+.+.+|.+.+. ....++|+|+++++..++.+...
T Consensus 64 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~v~~t~G~~~al~~~~~~l~~-------- 131 (404)
T 2o1b_A 64 GIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK----EDEVCILYGTKNGLVAVPTCVIN-------- 131 (404)
T ss_dssp HHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----cccEEEcCCcHHHHHHHHHHhcC--------
Confidence 3445555444321 2234444567899999999999999986210 01689999999999888776532
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 187 ENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 187 ~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..|+++..+|.++..+++..|. +++.+|.++ +++.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 132 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~ 198 (404)
T 2o1b_A 132 ---PGDYVLLPDPGYTDYLAGVLLADG---KPVPLNLEP-PHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTA 198 (404)
T ss_dssp ---TTCEEEEEESCCSSHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCc-ccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccC
Confidence 456778888899999999999999 999999875 34679999999999754 34677788899999996
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhh
Q 048643 267 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFID--GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 267 p---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~--gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 340 (506)
| +++|+++|++||+++++|++|+.+..-. ....... +....|.+..++||+++.| ..+|+++.+ ++.. +.+
T Consensus 199 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~l 275 (404)
T 2o1b_A 199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN-KDMI-QAL 275 (404)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC-HHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC-HHHH-HHH
Confidence 5 7899999999999999999998754311 1111111 1113457788999999744 567887764 3332 222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
.....+.. .+ ...+..+++...+ +.+.++++.++..++++++.+.|++. +++ |
T Consensus 276 ~~~~~~~~------------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 334 (404)
T 2o1b_A 276 KKYQTHTN------------------AG--MFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVHAK 334 (404)
T ss_dssp HHHHHHHC------------------CC--CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCC
T ss_pred HHHHhhcc------------------CC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecCCC
Confidence 11100000 00 1223333333333 35677888888999999999999987 676 3
Q ss_pred -ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEEEEEEEecCCCCCHHHHHHHHH
Q 048643 415 -SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG--GIYAMRFAVGATLTEERHVMVAWT 489 (506)
Q Consensus 415 -~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~tt~edi~~li~ 489 (506)
++ +.+++.... + ..++.+++. +.|+....+..+. +..++|+++.. ++++|+++++
T Consensus 335 ~g~~~~~~~~~~~----------~-------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~e~l~~~l~ 394 (404)
T 2o1b_A 335 GGIYVWLETPPGY----------D-------SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL---DDQKLDEAAI 394 (404)
T ss_dssp BSSEEEEECCTTC----------C-------HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS---CTTHHHHHHH
T ss_pred cceEEEEeCCCCC----------C-------HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC---CHHHHHHHHH
Confidence 43 555653210 0 235566655 4576433322222 24689999963 5669999999
Q ss_pred HHHHHHH
Q 048643 490 MVQEQLE 496 (506)
Q Consensus 490 ~l~~~~~ 496 (506)
.|.++.+
T Consensus 395 ~l~~~l~ 401 (404)
T 2o1b_A 395 RLTELAY 401 (404)
T ss_dssp HHHGGGG
T ss_pred HHHHHHH
Confidence 8887654
No 125
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.84 E-value=4e-20 Score=185.57 Aligned_cols=298 Identities=15% Similarity=0.125 Sum_probs=183.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|...+...++| +++++++|.+ ..++++|||+++..++.+..+ ++..|+++..+|.
T Consensus 33 ~y~~~~~~~~l~----~~la~~~g~~---------~~~~~~~gt~a~~~~~~~~~~-----------~gd~Vl~~~~~~~ 88 (347)
T 1jg8_A 33 VYGEDPTINELE----RLAAETFGKE---------AALFVPSGTMGNQVSIMAHTQ-----------RGDEVILEADSHI 88 (347)
T ss_dssp GGTCCHHHHHHH----HHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCHH
T ss_pred ccCCChHHHHHH----HHHHHHhCCc---------eEEEecCcHHHHHHHHHHhcC-----------CCCEEEEcCcchh
Confidence 454556655555 5677777764 458888899998877755432 5667888899998
Q ss_pred HHHH---HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC-CcccC---hhHHHHHH
Q 048643 203 ALQK---AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TAVDP---LKPLCDVA 275 (506)
Q Consensus 203 s~~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~idp---l~~I~~ia 275 (506)
+... .+...|. +++.+ .++ ++.+|+++|+++|++....+..+.+|+.+.++|++ |.+-| +++|+++|
T Consensus 89 ~~~~~~~~~~~~g~---~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a 162 (347)
T 1jg8_A 89 FWYEVGAMAVLSGV---MPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIA 162 (347)
T ss_dssp HHSSTTHHHHHTCC---EEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHH
T ss_pred hhccccchhhccCe---EEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHH
Confidence 7654 5677888 88888 432 46899999999886411011235678888999999 99855 57899999
Q ss_pred HHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccc
Q 048643 276 KQFGIWVHVDAAYAGSACI--CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATE 353 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~--~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 353 (506)
++||+++|+|+||.-+... ......+. ..+|.+++++||+++.|. |.+++.+++......... .+..
T Consensus 163 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~-~~~~----- 231 (347)
T 1jg8_A 163 KEHGINVHIDGARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAPV--GSVVVGDRDFIERARKAR-KMLG----- 231 (347)
T ss_dssp HHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHH-HHHT-----
T ss_pred HHCCCEEEeehhhhhcchhhcCCChHHhc---ccccEEEEecccccCCCc--eEEEEcCHHHHHHHHHHH-HHcC-----
Confidence 9999999999987421111 11112221 268899999999999874 444455554332211100 0110
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeecCCCc
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLKPKYE 426 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~~~~~ 426 (506)
.+-+..++..+..+..+. ...+.+++..++++++.+.|++. +++ | +++.+++....
T Consensus 232 -------------~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~- 294 (347)
T 1jg8_A 232 -------------GGMRQAGVLAAAGIIALT--KMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLK- 294 (347)
T ss_dssp -------------CCCSSTHHHHHHHHHHHH--HSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTSS-
T ss_pred -------------CchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEccccc-
Confidence 000111222222222221 11112334445678888888776 554 2 67777764211
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
....++.+.|.+.|+.. .+. +..++|+++ +..+++++++++++.|+++.+++
T Consensus 295 ---------------~~~~~~~~~l~~~gi~v-~~~---~~~~iRl~~-~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 295 ---------------VNAHGFIEALRNSGVLA-NAV---SDTEIRLVT-HKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp ---------------SCHHHHHHHHHHHTEEC-EEE---ETTEEEEEC-CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------CCHHHHHHHHHHCCCEE-ecC---CCCeEEEEe-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 01245666676678643 332 135799998 45678899999999999887653
No 126
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.84 E-value=2.2e-20 Score=192.19 Aligned_cols=301 Identities=12% Similarity=0.065 Sum_probs=185.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH---
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ--- 205 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~--- 205 (506)
....+|+.+.+++++++|.+.. -+++++|++++..++.+... ++..|+++...|.++.
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~gd~v~~~~~~~~~~~~~~ 133 (420)
T 3gbx_A 73 YVDVVEQLAIDRAKELFGADYA--------NVQPHSGSQANFAVYTALLQ-----------PGDTVLGMNLAQGGHLTHG 133 (420)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEEEEC--------
T ss_pred HHHHHHHHHHHHHHHHhCCCCc--------eeEecCcHHHHHHHHHHhcC-----------CCCEEEecchhhcceeccc
Confidence 3456787788999999998653 34455668899888766533 5667888888887743
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEee
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVD 285 (506)
......|.+. ..+.++.+ .++.+|+++|++++++.. +.+|+++.+++ |.+.|+++|+++|++||+++++|
T Consensus 134 ~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~D 203 (420)
T 3gbx_A 134 SPVNFSGKLY-NIVPYGID--ESGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVD 203 (420)
T ss_dssp ----CHHHHS-EEEEEEEC--TTCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhcccce-eEEeccCC--ccCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEE
Confidence 2222333300 34455555 357899999999998741 33666665544 56889999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCc-hhHHhhhcCCccccCCccccCCCccCCCCcc
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP-SALVSSLSTNPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
++|+.+......+... +..+|.++.++||+++.|.+ |+++.++. ..+...+.. +.... +
T Consensus 204 e~~~~~~~~~~~~~~~---~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~---~~~~~-------------~ 263 (420)
T 3gbx_A 204 MAHVAGLIAAGVYPNP---VPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNS---AVFPS-------------A 263 (420)
T ss_dssp CTTTHHHHHTTSSCCS---TTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHH---HHC----------------
T ss_pred CCcchhceecccCCcc---cccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhh---hcCCC-------------C
Confidence 9986554432222111 23589999999999987765 77776652 122222211 11100 0
Q ss_pred ccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecCCCcccccccccch
Q 048643 365 ITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKPKYENCHSQQLVTE 436 (506)
Q Consensus 365 ~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~~~~~~~~~~~~~ 436 (506)
..+.. .....+..++.....++++++.++..++++++.+.|.+. +++ + +++.+.+.+..
T Consensus 264 -~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------- 330 (420)
T 3gbx_A 264 -QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN----------- 330 (420)
T ss_dssp --CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT-----------
T ss_pred -CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC-----------
Confidence 00000 112244445555556778899999999999999999884 666 1 45566554321
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEee-------eeECCEEEEEEEecCCC---CCHHHHHHHHHHHHHHHHH
Q 048643 437 EEAINEFNRELLESINASGKAYMTH-------AVCGGIYAMRFAVGATL---TEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 437 ~~~~~~~~~~l~~~l~~~g~~~~~~-------~~~~g~~~lR~~~~~~~---tt~edi~~li~~l~~~~~~ 497 (506)
.....+.+.+.+.|+. +.+ ....+...+|+++.... .++++|+++++.|+++.++
T Consensus 331 -----~~~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 331 -----LTGKEADAALGRANIT-VNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp -----CCHHHHHHHHHHTTEE-CEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred -----CCHHHHHHHHHHCCcE-eccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 0124455666667864 443 12223345999984322 3578999999999887644
No 127
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.84 E-value=8.8e-21 Score=192.27 Aligned_cols=310 Identities=12% Similarity=0.118 Sum_probs=200.8
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+... .+..++...++|+. +++++|.+ .+++++|||+|+..++.+++-.
T Consensus 18 v~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~~~~~sGt~al~~al~~~~~~--------- 73 (367)
T 3nyt_A 18 IDAGIQRVLRHG--QYILGPEVTELEDR----LADFVGAK---------YCISCANGTDALQIVQMALGVG--------- 73 (367)
T ss_dssp HHHHHHHHHHHC--CCSSCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHhcC--CccCChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHhCCC---------
Confidence 344444444322 33456666666655 56666654 4799999999999888776311
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
++..|+++..+|.++..+++..|. +++.++++++ ++.+|+++|+++|+++ +.+|+ +++++|...|+
T Consensus 74 -~gd~Vi~~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~~~ 139 (367)
T 3nyt_A 74 -PGDEVITPGFTYVATAETVALLGA---KPVYVDIDPR-TYNLDPQLLEAAITPR------TKAII---PVSLYGQCADF 139 (367)
T ss_dssp -TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCH
T ss_pred -CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHhcCcC------CcEEE---eeCCccChhhH
Confidence 566788999999999999999999 9999999864 4799999999998543 23444 56789999999
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEc--CccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
++|.++|++||+++|+|++|+.+....... .+. ..|.++.+ +||+++.+..+|+++.+++.... .+.....+
T Consensus 140 ~~i~~la~~~~~~li~D~a~~~g~~~~~~~----~~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~-~~~~~~~~ 213 (367)
T 3nyt_A 140 DAINAIASKYGIPVIEDAAQSFGASYKGKR----SCN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELAT-AIRQIARH 213 (367)
T ss_dssp HHHHHHHHHTTCCBEEECTTTTTCEETTEE----TTS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHH-HHHHHTBT
T ss_pred HHHHHHHHHcCCEEEEECccccCCeECCee----ccC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHH-HHHHHHhc
Confidence 999999999999999999997544432111 111 12777777 59999874447777776665432 22110000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c----------c
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P----------S 415 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p----------~ 415 (506)
-.. ..+.......+.+...+..++.+..+ +.+++..++..++++++.+.|++. ++. | .
T Consensus 214 g~~--------~~~~~~~~g~~~~~~~~~aa~~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~ 282 (367)
T 3nyt_A 214 GQD--------RRYHHIRVGVNSRLDTLQAAILLPKL--EIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYA 282 (367)
T ss_dssp TEE--------ETTEECSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCS
T ss_pred CCC--------cCceeeccCcCCCccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeE
Confidence 000 00000011122334445555555543 556788888999999999999987 344 1 2
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee--------EC------------CEEEEEEEec
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV--------CG------------GIYAMRFAVG 475 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~------------g~~~lR~~~~ 475 (506)
.+.++.. . .+.+.+.|.++|+..-.... +. ....+|+.+
T Consensus 283 ~~~~~~~-~-------------------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~- 341 (367)
T 3nyt_A 283 QYTVRMD-N-------------------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPM- 341 (367)
T ss_dssp SEEEECS-S-------------------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECC-
T ss_pred EEEEEeC-C-------------------HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccC-
Confidence 2333332 1 24566667777763211110 00 135799987
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 048643 476 ATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 476 ~~~tt~edi~~li~~l~~~ 494 (506)
++.+|++||+++++.|++.
T Consensus 342 ~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 342 HPYLDTASIKIICAALTNL 360 (367)
T ss_dssp CTTCCHHHHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 7889999999999999765
No 128
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.84 E-value=2.5e-19 Score=184.21 Aligned_cols=276 Identities=14% Similarity=0.124 Sum_probs=188.2
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH----HHHHh
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK----AAQIV 211 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k----a~~~~ 211 (506)
++.+++++++|.+ ..++++||++|+..++.+... ++..|+++...|.++.. .++..
T Consensus 66 ~l~~~ia~~~g~~---------~~i~~~~g~~ai~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~~~~ 125 (404)
T 1e5e_A 66 NLEGKIAFLEKTE---------ACVATSSGMGAIAATVLTILK-----------AGDHLISDECLYGCTHALFEHALTKF 125 (404)
T ss_dssp HHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHhCCC---------cEEEeCChHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHHHHc
Confidence 3445666677764 357788888888877765432 55678888999998888 78888
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH-hCCEEEeeccccc
Q 048643 212 GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAG 290 (506)
Q Consensus 212 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~-~g~~lhVDaA~gg 290 (506)
|+ +++.+|.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|++ ||+++++|++|+.
T Consensus 126 g~---~~~~v~~~-------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~ 189 (404)
T 1e5e_A 126 GI---QVDFINTA-------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS 189 (404)
T ss_dssp TC---EEEEECTT-------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC
T ss_pred CC---EEEEECCC-------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCch
Confidence 99 89998864 678898888653 4588899999999999999999999999 9999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
+....+. . -++|.++.++||+++.|.+ +|++++++. .+.+.+.....++. +
T Consensus 190 ~~~~~~~-~------~~~di~~~S~sK~~~~~g~ri~G~~~~~~~-~~~~~l~~~~~~~~-------------------g 242 (404)
T 1e5e_A 190 PMITNPV-D------FGVDVVVHSATKYINGHTDVVAGLICGKAD-LLQQIRMVGIKDIT-------------------G 242 (404)
T ss_dssp TTTCCGG-G------GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHTCCCCCC-------------------C
T ss_pred hhhCCcc-c------cCCEEEEEcCccccCCCCCCeEEEEEECHH-HHHHHHHHHHHhCC-------------------C
Confidence 6543221 1 1689999999999998876 688887654 22212321111110 0
Q ss_pred CCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC--------------CCc---c------ceEEEeecCCC
Q 048643 369 RRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK--------------RVS---P------SAVMDKLKPKY 425 (506)
Q Consensus 369 r~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~--------------~~~---p------~~v~f~~~~~~ 425 (506)
.....+..|++++.+. .+..++++..++++++.+.+++.+ +++ | ++++|++.+.
T Consensus 243 ~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~- 319 (404)
T 1e5e_A 243 SVISPHDAWLITRGLS--TLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG- 319 (404)
T ss_dssp CCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH-
T ss_pred CCCCHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCC-
Confidence 0123456677766653 355667777788888888887654 222 1 5677765321
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-------------------------CC--EEEEEEEecCCC
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC-------------------------GG--IYAMRFAVGATL 478 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------------~g--~~~lR~~~~~~~ 478 (506)
...+.+.+.+.|+ ++....+ .| .+++|+++..
T Consensus 320 ------------------~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-- 378 (404)
T 1e5e_A 320 ------------------FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-- 378 (404)
T ss_dssp ------------------HHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--
T ss_pred ------------------HHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--
Confidence 1223334444565 2222111 22 4689999954
Q ss_pred CCHHHHHHHHHHHHHHHHHHHcc
Q 048643 479 TEERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 479 tt~edi~~li~~l~~~~~~l~~~ 501 (506)
|+++++++.|+++.+.+.+.
T Consensus 379 ---e~~~~li~~l~~al~~~~~~ 398 (404)
T 1e5e_A 379 ---EDADELIADFKQGLDALLRS 398 (404)
T ss_dssp ---SCHHHHHHHHHHHHHHHHCC
T ss_pred ---CCHHHHHHHHHHHHHHHHHh
Confidence 58999999999998877654
No 129
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.84 E-value=1.4e-20 Score=189.71 Aligned_cols=302 Identities=13% Similarity=0.062 Sum_probs=195.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCc-hHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTT-CEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg-t~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
++....+..++.+++++++|.+... ..++++|+ |+|+..++.+.... +.++..|+++...|++..
T Consensus 43 ~~~~~~~~~~l~~~la~~~g~~~~~------~v~~~~g~gt~al~~~~~~l~~~--------~~~g~~vi~~~~~~~~~~ 108 (360)
T 1w23_A 43 SQSYEEVHEQAQNLLRELLQIPNDY------QILFLQGGASLQFTMLPMNLLTK--------GTIGNYVLTGSWSEKALK 108 (360)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHHHCCT--------TCEEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCcchHHHHHHHHHhcCC--------CCcccEEEecchhHHHHH
Confidence 5667778888999999999996321 67888887 88887766554321 113557888888887743
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHH-HHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLT-QINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~-~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
. ++. .| +++.+|++++ ++.+|+++|++ ++++. +.+|+++.++|++|.+-| +| +++||+++++
T Consensus 109 ~-~~~--~g--~~~~v~~~~~-~~~~d~~~l~~~~i~~~------~k~v~~~~~~nptG~~~~--~i---~~~~~~~li~ 171 (360)
T 1w23_A 109 E-AKL--LG--ETHIAASTKA-NSYQSIPDFSEFQLNEN------DAYLHITSNNTIYGTQYQ--NF---PEINHAPLIA 171 (360)
T ss_dssp H-HHT--TS--EEEEEEECGG-GTSCSCCCGGGCCCCTT------EEEEEEESEETTTTEECS--SC---CCCCSSCEEE
T ss_pred H-HHH--hC--CeEEeecccc-cCcCCccchHhhccCCC------CCEEEEeCCCCCcceecc--cc---cccCCceEEE
Confidence 3 333 34 6888998742 34689999988 77432 457888899999999854 22 2389999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCc
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~ 363 (506)
|++|+.+....+ . . ..|.++.++||+++ |.|+|++++++.. + +.+.. .+.|+..... .. ..+
T Consensus 172 D~a~~~~~~~~~-~----~---~~di~~~s~sK~~~-~~G~G~~~~~~~~-~-~~~~~~~~~~~~~~~~-----~~-~~~ 234 (360)
T 1w23_A 172 DMSSDILSRPLK-V----N---QFGMIYAGAQKNLG-PSGVTVVIVKKDL-L-NTKVEQVPTMLQYATH-----IK-SDS 234 (360)
T ss_dssp ECTTTTTSSCCC-G----G---GCSEEEEETTTTTS-CTTCEEEEEEHHH-H-CSCCTTCCGGGCHHHH-----HH-TTT
T ss_pred echhhcCCCCcC-c----c---cCCEEEEEcccccC-CCCcEEEEEcHHH-H-hhcccCCcchhhhhhh-----hh-ccC
Confidence 999987653321 1 1 23899999999987 6689999987532 2 22211 1111100000 00 000
Q ss_pred cccCCCC-CCchHHHHHHHHhchh-HHHHHHHHHHHHHHHHHHHHHcCCCC-c----c----c-eEEEeecCCCcccccc
Q 048643 364 QITLSRR-FRSLKLWLVIRNYGVA-NLRHFLRSHVNMAKLFERLVASDKRV-S----P----S-AVMDKLKPKYENCHSQ 431 (506)
Q Consensus 364 ~~~~sr~-~~al~~~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~-~----p----~-~v~f~~~~~~~~~~~~ 431 (506)
. ..+.. .....+..+++.+..+ +++++.++..++++++.+.|++.+++ . | + +++|++.+.
T Consensus 235 ~-~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 306 (360)
T 1w23_A 235 L-YNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------- 306 (360)
T ss_dssp C-SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH-------
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC-------
Confidence 0 01111 1123445556655445 78899999999999999999988755 3 2 3 677765321
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
....++.+.|.+.|+.. .+.. ....++|+++. ..++++++++++++|+++.++
T Consensus 307 ----------~~~~~~~~~l~~~gi~~-~~~~-~~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 307 ----------ELNQQFLAKAKEQGFVG-LNGH-RSVGGCRASIY-NAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp ----------HHHHHHHHHHHHTTEES-CBCC-TTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ----------ccHHHHHHHHHHCCeee-ecCC-CCCCeEEEEec-CCCCHHHHHHHHHHHHHHHhh
Confidence 12345677777788743 2221 12357999995 556888999999999987653
No 130
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.84 E-value=2.2e-19 Score=183.87 Aligned_cols=213 Identities=15% Similarity=0.120 Sum_probs=157.0
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH----HH
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA----QI 210 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~----~~ 210 (506)
.++.+.+++++|.+ ..++++||++|+..++.++.. ++..|+++...|.+....+ +.
T Consensus 69 ~~l~~~la~~~g~~---------~~~~~~sGt~A~~~al~~~~~-----------~gd~Vi~~~~~y~~~~~~~~~~~~~ 128 (392)
T 3qhx_A 69 TALEAALAAVEDAA---------FGRAFSSGMAAADCALRAMLR-----------PGDHVVIPDDAYGGTFRLIDKVFTG 128 (392)
T ss_dssp HHHHHHHHHHTTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHHHHHHHHHHh
Confidence 34456678888875 468889999999888876532 5567888899998877766 55
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|+ +++.+|.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|++||+++|+|++|+.
T Consensus 129 ~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~ 192 (392)
T 3qhx_A 129 WNV---EYTPVALA-------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFAS 192 (392)
T ss_dssp GTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC
T ss_pred cCc---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcc
Confidence 677 88888753 899999998754 44788899999999999999999999999999999999986
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
++...+ .. -++|.++.++||+++.+.+ +|+++.+++.... .+..... ..+
T Consensus 193 ~~~~~~-~~------~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~-~l~~~~~--------------------~~g 244 (392)
T 3qhx_A 193 PALQQP-LS------LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQ-SFAFLQN--------------------GAG 244 (392)
T ss_dssp TTTCCG-GG------GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHHH--------------------HHC
T ss_pred cccCCh-HH------hCCcEEEEcCccccCCCCCceEEEEEECcHHHHH-HHHHHHH--------------------hcC
Confidence 543322 11 1689999999999997743 7888877654332 2211000 011
Q ss_pred CCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 369 RRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 369 r~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
....++..|+.++.+ +.+..++++..++++++.+.|++.|.+.
T Consensus 245 ~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~ 287 (392)
T 3qhx_A 245 AVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAIS 287 (392)
T ss_dssp CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred CCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 223456677777654 4567788889999999999999887653
No 131
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.84 E-value=3.1e-19 Score=180.52 Aligned_cols=307 Identities=12% Similarity=0.062 Sum_probs=196.6
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+.. ...|. .+...++++. +++++|.+.+ ..++|+|+++++..++.++ .
T Consensus 42 v~~a~~~~~~~-~~~y~-~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~al~~~~~~~--~--------- 97 (364)
T 1lc5_A 42 VKRALIDNLDC-IERYP-DADYFHLHQA----LARHHQVPAS-------WILAGNGETESIFTVASGL--K--------- 97 (364)
T ss_dssp HHHHHHHTGGG-GGSCC-CTTCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHH--C---------
T ss_pred HHHHHHHHHHH-hhcCC-CCCHHHHHHH----HHHHHCcCHH-------HEEECCCHHHHHHHHHHHc--C---------
Confidence 34555544432 22332 2344555554 5555677654 6899999999998777665 1
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP- 267 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp- 267 (506)
+ ..|++...+|.++..+++..|. +++.+|.++++++.+ ++++.+++.+ .+.+|+++.++|++|.+-|
T Consensus 98 -g-d~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~ 165 (364)
T 1lc5_A 98 -P-RRAMIVTPGFAEYGRALAQSGC---EIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLPER 165 (364)
T ss_dssp -C-SEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCCCH
T ss_pred -C-CeEEEeCCCcHHHHHHHHHcCC---eEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCCCH
Confidence 3 3566777899999999999999 999999875222333 3434333321 2346777888999999988
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP 344 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~ 344 (506)
+++|+++|++||+++++|++|+.+..-.......+ +....|.+..++||+++.| ..+|++++.+++... .+....
T Consensus 166 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-~l~~~~ 243 (364)
T 1lc5_A 166 PLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMA-RMRRQQ 243 (364)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHH-HHHHHS
T ss_pred HHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHHH-HHHHhC
Confidence 99999999999999999999986543111111111 1124677888999999854 567888734444332 221100
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch-hHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEE
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-ANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVM 418 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~ 418 (506)
. .+ ....+..+++...+.. +.++++.++..++++++.+.|++.|+++ | +.+.
T Consensus 244 ----~------------~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~ 301 (364)
T 1lc5_A 244 ----M------------PW------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLL 301 (364)
T ss_dssp ----C------------TT------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEE
T ss_pred ----C------------CC------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEE
Confidence 0 00 1133445555555533 4577888888899999999999888877 3 6666
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+++... ..++.+.|.++|+.......+ .+..++|+++. +++++++++++|+++.+
T Consensus 302 ~~~~~~-------------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 302 LRCERE-------------------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLT 358 (364)
T ss_dssp EEESCT-------------------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC-
T ss_pred EECCCc-------------------HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhh
Confidence 665321 134566677777643332222 12468999974 57799999999998876
Q ss_pred HH
Q 048643 497 AF 498 (506)
Q Consensus 497 ~l 498 (506)
++
T Consensus 359 ~~ 360 (364)
T 1lc5_A 359 GI 360 (364)
T ss_dssp --
T ss_pred cc
Confidence 65
No 132
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.84 E-value=3.5e-19 Score=182.34 Aligned_cols=316 Identities=14% Similarity=0.089 Sum_probs=198.0
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
+|...++|+. +++++|.+ ..++++|||+|+..++.+++-. ++..|+++..+|.++..
T Consensus 31 g~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~~~~l~~~----------~gd~Vl~~~~~~~~~~~ 87 (394)
T 1o69_A 31 GEFVNRFEQS----VKDYSKSE---------NALALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASVA 87 (394)
T ss_dssp THHHHHHHHH----HHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGTH
T ss_pred ChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CCCEEEECCCccHHHHH
Confidence 3445566655 55555652 6799999999998888775211 55678889999999999
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
+++..|. +++.+|++. +|.+|+++|+++|++.. ..+.+|+++. ++|...|+++|+++|++||+++++|+
T Consensus 88 ~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~De 156 (394)
T 1o69_A 88 PICYLKA---KPVFIDCDE--TYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDA 156 (394)
T ss_dssp HHHHTTC---EEEEECBCT--TSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCC---EEEEEEeCC--CCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEEC
Confidence 9999999 999999873 57999999999997621 1133566553 78999999999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcccc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
+|+.+....... ...+..+|.++++.||+++ |.++|+++++++............+.... . .+ . ..+
T Consensus 157 a~~~g~~~~~~~---~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~-----~--~~-~-~~~ 223 (394)
T 1o69_A 157 AEALGSFYKNKA---LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC-----L--HY-E-HLD 223 (394)
T ss_dssp TTCTTCEETTEE---TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS-----S--SC-C-CSS
T ss_pred cCcccceeCCcc---cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC-----c--cc-c-ccc
Confidence 998433332211 1112368899999999776 66899999876554322211111111000 0 00 0 111
Q ss_pred CCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---------cc--eEEEeecCCCc--c--c---
Q 048643 367 LSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---------PS--AVMDKLKPKYE--N--C--- 428 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---------p~--~v~f~~~~~~~--~--~--- 428 (506)
.+.+++...+..++.....+.+++.+++..++++++.+.|++. ++ ++ +++|++.+... + .
T Consensus 224 ~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 301 (394)
T 1o69_A 224 YGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDI 301 (394)
T ss_dssp CCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEE
T ss_pred cCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccc
Confidence 2222333233333322124567888999999999999999875 43 12 46777653200 0 0
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeee--------eECC----E---------EEEEEEecCCCCCHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHA--------VCGG----I---------YAMRFAVGATLTEERHVMVA 487 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~~g----~---------~~lR~~~~~~~tt~edi~~l 487 (506)
.....+ . .......++.+.|.+.|+. +.+. .+.. . ..+|+.+ ++.+|++||+++
T Consensus 302 ~~~~~~-~--~~~~~~~~l~~~L~~~gI~-v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~edi~~~ 376 (394)
T 1o69_A 302 NISQKN-I--TLHPKISKLIEDLKNKQIE-TRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS-GTAMSKDDVYEI 376 (394)
T ss_dssp ECCCCC-C--CCCHHHHHHHHHHHHTTCC-CBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC-CTTCCHHHHHHH
T ss_pred cccccc-c--ccccCHHHHHHHHHHcCCc-ccccCCccccchhhhccCCCCChHHHHHhcCeEEccC-CCCCCHHHHHHH
Confidence 000000 0 0001135677777777864 3222 1111 0 3455555 688999999999
Q ss_pred HHHHHHHHH
Q 048643 488 WTMVQEQLE 496 (506)
Q Consensus 488 i~~l~~~~~ 496 (506)
+++|+++.+
T Consensus 377 ~~~l~~~~~ 385 (394)
T 1o69_A 377 SKLILKSIK 385 (394)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999998754
No 133
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.84 E-value=1.6e-19 Score=185.10 Aligned_cols=213 Identities=14% Similarity=0.098 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH----H
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA----Q 209 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~----~ 209 (506)
..++.+.+++++|.+ ..+++++|++|+..++.++.. ++..|+++...|.++...+ .
T Consensus 67 ~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~ 126 (398)
T 1gc0_A 67 LNLLEARMASLEGGE---------AGLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCTFAFLHHGIG 126 (398)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHHHHHHHHTGG
T ss_pred HHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhc-----------CCCEEEEeCCCchhHHHHHHHHHH
Confidence 334445677778875 346777779999888877632 4567888889999888776 5
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
..|+ +++.++.+ |+++|+++|+++ +.+|+++.+++++|.+.|+++|+++|++||+++|+|++|+
T Consensus 127 ~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~ 190 (398)
T 1gc0_A 127 EFGV---KLRHVDMA-------DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYC 190 (398)
T ss_dssp GGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTT
T ss_pred HcCC---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCc
Confidence 5677 78888742 789999988653 4588889999999999999999999999999999999998
Q ss_pred cccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 290 GSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
.+....+. . .++|.++.++||+++.|.+ +|++++++.. +...+.....++.
T Consensus 191 ~~~~~~~~-~------~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~-~~~~~~~~~~~~~------------------- 243 (398)
T 1gc0_A 191 TPYLQRPL-E------LGADLVVHSATKYLSGHGDITAGIVVGSQAL-VDRIRLQGLKDMT------------------- 243 (398)
T ss_dssp HHHHCCGG-G------GTCSEEEEETTTTTTCSSSCCCEEEEECHHH-HHHHHHTHHHHHT-------------------
T ss_pred ccccCCch-h------hCceEEEECCccccCCCCCCeEEEEEEChHH-HHHHHHHHhhccC-------------------
Confidence 76543321 1 1689999999999998876 6887776532 2212211111100
Q ss_pred CCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC
Q 048643 368 SRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR 411 (506)
Q Consensus 368 sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~ 411 (506)
+-....+..|..++.+ +.+..++++..++++++.+.|++++.
T Consensus 244 ~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~ 285 (398)
T 1gc0_A 244 GAVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQ 285 (398)
T ss_dssp CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0012345566666654 45677778888888999998887653
No 134
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.83 E-value=6.2e-19 Score=180.11 Aligned_cols=321 Identities=11% Similarity=0.015 Sum_probs=207.0
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCC-cEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 108 FLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 108 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~-~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
.+.+.+...+. ....|....+..++++++.+|+.+.+|.+ .+. . ..++|+|+++++..++.+.+.. |
T Consensus 47 ~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-----~~~i~~t~g~~~al~~~~~~~~~~-----g 115 (396)
T 3jtx_A 47 VITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDA-----DNEILPVLGSREALFSFVQTVLNP-----V 115 (396)
T ss_dssp HHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCT-----TTSEEEESSHHHHHHHHHHHHCCC------
T ss_pred HHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCC-----CCeEEEcCCcHHHHHHHHHHHhCC-----C
Confidence 34444544443 22344444456899999999999999975 221 3 6899999999998887766431 0
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
.++ .+..|+++..+|.++..+++.+|. +++.+|.+. +++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 116 ~~~-~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~-~g~~~d~~~l~~~~~~~------~~~v~l~~p~nptG~~ 184 (396)
T 3jtx_A 116 SDG-IKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPA-PSFNPDWRSISEEVWKR------TKLVFVCSPNNPSGSV 184 (396)
T ss_dssp --C-CCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHT------EEEEEEESSCTTTCCC
T ss_pred Ccc-CCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCC-CCCccCHHHHHHhhccC------cEEEEEECCCCCCCCc
Confidence 000 025788888999999999999999 999999954 34689999999999864 3477778899999999
Q ss_pred cCh---hHHHHHHHHhCCEEEeecccccccccCccchhhh------cCCCCCCeeEEcCccccC-CCCcceEEEEeCchh
Q 048643 266 DPL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFI------DGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSA 335 (506)
Q Consensus 266 dpl---~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~------~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~ 335 (506)
-|. ++|+++|++||+++++|++|+.+..-.......+ ..-...+.+..+++|.++ ....+|+++. ++..
T Consensus 185 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~ 263 (396)
T 3jtx_A 185 LDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG-DAEL 263 (396)
T ss_dssp CCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE-CHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe-CHHH
Confidence 665 5599999999999999999986543211111111 001256677889999765 4466787765 3333
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc-
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS- 413 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~- 413 (506)
. ..+.....+.. . ....+...++...+. .+.+.++.++..++.+++.+.|++...+.
T Consensus 264 ~-~~~~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 322 (396)
T 3jtx_A 264 L-KNFLLYRTYHG------------------S--AMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKL 322 (396)
T ss_dssp H-HHHHHHHHHHT------------------C--CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred H-HHHHHHHhhcc------------------c--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccC
Confidence 2 22211000000 0 012222333333332 45678888888999999999998763343
Q ss_pred c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeE---------CCEEEEEEEecCCCCC
Q 048643 414 P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVC---------GGIYAMRFAVGATLTE 480 (506)
Q Consensus 414 p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~---------~g~~~lR~~~~~~~tt 480 (506)
| .++.+++.... ..++.++|.+ .|+. +.+... .+..++|++++. +
T Consensus 323 ~~~~~~~~~~~~~~~------------------~~~~~~~l~~~~gi~-v~~g~~~~~~~~~~~~~~~~iRis~~~---~ 380 (396)
T 3jtx_A 323 PDASFYIWLKVPDGD------------------DLAFARNLWQKAAIQ-VLPGRFLARDTEQGNPGEGYVRIALVA---D 380 (396)
T ss_dssp CSSSSEEEEECTTSC------------------HHHHHHHHHHHHCEE-CEEGGGGCCCCTTCCTTTTEEEEECCS---C
T ss_pred CCeeEEEEEECCCCC------------------HHHHHHHHHHHCCEE-EeCChHhCCcccccCCCCCeEEEEEcC---C
Confidence 4 44555554310 2345555543 4764 444322 235799999853 7
Q ss_pred HHHHHHHHHHHHHH
Q 048643 481 ERHVMVAWTMVQEQ 494 (506)
Q Consensus 481 ~edi~~li~~l~~~ 494 (506)
+++|+++++.|.++
T Consensus 381 ~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 381 VATCVKAAEDIVSL 394 (396)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88999999998875
No 135
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.83 E-value=1.8e-19 Score=185.64 Aligned_cols=301 Identities=12% Similarity=0.086 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH-HHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA-LQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ka~~ 209 (506)
..++..+.+++++++|.+.. .++++|||+|+..++.++.. ++..|+++..+|.+ +...+.
T Consensus 77 ~~~~~~a~~~~~~~~~~~~~--------~v~~~~Gs~a~~~al~~~~~-----------~gd~Vi~~~~~~~~~~~~~~~ 137 (425)
T 3ecd_A 77 DEVEALAIERVKRLFNAGHA--------NVQPHSGAQANGAVMLALAK-----------PGDTVLGMSLDAGGHLTHGAK 137 (425)
T ss_dssp CHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECC-----------
T ss_pred HHHHHHHHHHHHHHhCCCCc--------eeecCchHHHHHHHHHHccC-----------CCCEEEEcccccccceecchh
Confidence 35566666889999998653 35688899999888776532 56678888889987 323332
Q ss_pred --HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 210 --IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 210 --~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
..|.+. .++.++.++ +++.+|+++|++++++.. +.+|+++.+++ |...++++|+++|++||+|+++|++
T Consensus 138 ~~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~ 208 (425)
T 3ecd_A 138 PALSGKWF-NALQYGVSR-DTMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMA 208 (425)
T ss_dssp -------C-EEEEECCCT-TTSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECG
T ss_pred hhhcccce-eeeecCCCc-ccCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECc
Confidence 344410 334555543 357999999999997531 33566664443 7889999999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 288 YAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 288 ~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
|+.+.......... +..+|.++.++||++..|. +|+++.+++... ..+.. +.... ...
T Consensus 209 ~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~-~~~~~---~~~~~--------------~~~ 266 (425)
T 3ecd_A 209 HIAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIA-KKINS---AVFPG--------------LQG 266 (425)
T ss_dssp GGHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHH-HHHHH---HHC-------------------
T ss_pred ChHhhhhcccccCc---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHH-HHHHh---hhCcc--------------ccC
Confidence 76555433222211 2258999999999997765 577777654332 22211 11000 000
Q ss_pred CCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c----ceEEEeecCCCcccccccccchHHH
Q 048643 368 SRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P----SAVMDKLKPKYENCHSQQLVTEEEA 439 (506)
Q Consensus 368 sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p----~~v~f~~~~~~~~~~~~~~~~~~~~ 439 (506)
+.. .....++.++.....+++.++.++..++++++.+.|.+. +++ | .++.+.+.+..
T Consensus 267 ~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-------------- 331 (425)
T 3ecd_A 267 GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKG-------------- 331 (425)
T ss_dssp CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------------
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCC--------------
Confidence 100 112344555555556788899999999999999999885 666 2 45666654321
Q ss_pred HHHHHHHHHHHHHhcCcEEEeee------eECCEEEEEEEec---CCCCCHHHHHHHHHHHHHHHHHH
Q 048643 440 INEFNRELLESINASGKAYMTHA------VCGGIYAMRFAVG---ATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 440 ~~~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lR~~~~---~~~tt~edi~~li~~l~~~~~~l 498 (506)
.....+.+.+.+.|+...... .......+|+++. ....++++|+++++.|+++.++.
T Consensus 332 --~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 332 --LKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp --CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 012455666666786433211 1112357999853 22335889999999999887765
No 136
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.83 E-value=8.4e-19 Score=179.10 Aligned_cols=313 Identities=11% Similarity=0.048 Sum_probs=192.6
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
+..++...++|+. +++++|.+ ..+++++||+|+..++.+++... ..+. .++..|+++..+|.+
T Consensus 30 ~~~~~~~~~l~~~----la~~~~~~---------~~i~~~sGt~a~~~al~~~~~~~--~~~~--~~g~~Vi~~~~~~~~ 92 (390)
T 3b8x_A 30 FTMGEYVKQYETQ----FAKTFGSK---------YAVMVSSGSTANLLMIAALFFTK--KPRL--KKGDEIIVPAVSWST 92 (390)
T ss_dssp CSSCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHTTSSS--SCSC--CTTCEEEEESSSCHH
T ss_pred CCCChHHHHHHHH----HHHHHCCC---------cEEEECCHHHHHHHHHHHHHhhh--hcCC--CCcCEEEECCCCcHH
Confidence 3345666666655 55566664 46888999999988887763100 0000 145678899999999
Q ss_pred HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 204 LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 204 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
+..+++..|. +++.+|++++ ++.+|+++|+++|+++ +.+|+++ +.+|...|+++|+++|++||+++|
T Consensus 93 ~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li 159 (390)
T 3b8x_A 93 TYYPLQQYGL---RVKFVDIDIN-TLNIDIESLKEAVTDS------TKAILTV---NLLGNPNNFDEINKIIGGRDIILL 159 (390)
T ss_dssp HHHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHCCTT------EEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEE
T ss_pred HHHHHHHcCC---EEEEEecCcc-ccCcCHHHHHHHhCcC------CeEEEEE---CCccChhhHHHHHHHHHHcCCEEE
Confidence 9999999999 9999999864 4799999999998653 3355555 357889999999999999999999
Q ss_pred eecccccccccCccchhhhcCC-CCCCeeEEcCccccCCCCcceEEEEeCchhHHh--hhcCCccccCCcc-------cc
Q 048643 284 VDAAYAGSACICPEFQHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSALVS--SLSTNPEYLKNKA-------TE 353 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~--~~~~~~~yl~~~~-------~~ 353 (506)
+|++|+.+..... +. .|. ....+++..++|.+..|.+ |+++++++..... .+... .+..+.. ..
T Consensus 160 ~D~a~~~g~~~~~--~~--~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~-g~~~~~~~~~~~~~~~ 233 (390)
T 3b8x_A 160 EDNCESMGATFNN--KC--AGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAH-GWTRNLPKKNKVTGVK 233 (390)
T ss_dssp EECTTCTTCEETT--EE--TTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBT-TBSTTSCSEETTTEEC
T ss_pred EECcCcccCEECC--cc--cccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhc-CCCccccccccccccc
Confidence 9999985544321 11 111 1223444444555655554 7787776443211 11111 1000000 00
Q ss_pred C-CCccCCCCccccCCCC--CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c------ce--EEEee
Q 048643 354 S-KQVVDYKDWQITLSRR--FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P------SA--VMDKL 421 (506)
Q Consensus 354 ~-~~~~~~~~~~~~~sr~--~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p------~~--v~f~~ 421 (506)
. ........+. ..+.+ ...+..++.+.. .+.+++..++..++++++.+.|+++|+++ + +. +.+++
T Consensus 234 ~~~~~~~~~~~~-~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 310 (390)
T 3b8x_A 234 SDDQFEESFKFV-LPGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFII 310 (390)
T ss_dssp CSCTTTSSSCBC-SCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEE
T ss_pred ccccccccccee-ccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEe
Confidence 0 0000000011 11222 445666766665 36788899999999999999999988876 1 22 33344
Q ss_pred cCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEe---ee---e---EC--C--------------EEEEEEEecC
Q 048643 422 KPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMT---HA---V---CG--G--------------IYAMRFAVGA 476 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~---~---~~--g--------------~~~lR~~~~~ 476 (506)
.+.. .....++.+.|.+.|+..-. +. . .. + ...+|+++ +
T Consensus 311 ~~~~---------------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-~ 374 (390)
T 3b8x_A 311 KKDS---------------GVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGN-H 374 (390)
T ss_dssp CTTS---------------CCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEEC-C
T ss_pred cCcC---------------cccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeC-C
Confidence 3210 00124566777777763221 11 0 00 0 13699998 6
Q ss_pred CCCCHHHHHHHHHHH
Q 048643 477 TLTEERHVMVAWTMV 491 (506)
Q Consensus 477 ~~tt~edi~~li~~l 491 (506)
+.+|++||+++++.|
T Consensus 375 ~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 375 QIELFDEIDYLREVL 389 (390)
T ss_dssp SSCCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhh
Confidence 888999999999876
No 137
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.83 E-value=4.5e-19 Score=180.49 Aligned_cols=303 Identities=12% Similarity=0.080 Sum_probs=197.5
Q ss_pred ChhhHHHHHHHHHHH-HHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHH-HHHHHHhhcccCCCCeEEEeCCCCchHH
Q 048643 127 SPAATELENIVMDWL-GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA-RDRVLNKIGRENISKLVVYGSDQTHCAL 204 (506)
Q Consensus 127 ~p~~~~lE~~~~~~l-a~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~a-r~~~~~~~~~~~~~~~~v~~s~~~H~s~ 204 (506)
+|...++|++ + ++++|... ..++++|||+|+..++.+. .. ++..|+++..+|.++
T Consensus 35 ~~~~~~l~~~----~~a~~~g~~~--------~~v~~~sgt~al~~al~~l~~~-----------~Gd~Vi~~~~~~~~~ 91 (377)
T 3ju7_A 35 GPINQRFEQT----IMSGFFQNRG--------AVTTVANATLGLMAAIQLKKRK-----------KGKYALMPSFTFPAT 91 (377)
T ss_dssp CHHHHHHHHH----HHHHTSTTCS--------EEEEESCHHHHHHHHHHHHSCT-----------TCCEEEEESSSCTHH
T ss_pred CHHHHHHHHH----HHHHHhCCCC--------eEEEeCCHHHHHHHHHHHcCCC-----------CcCEEEECCCCcHHH
Confidence 5767777765 5 77777222 5799999999998887764 22 667888999999999
Q ss_pred HHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHH-HHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 205 QKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQI-NLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 205 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i-~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
..++..+|. +++.++++++ +|.+|+++|++++ ++.. .+.+|+ +++++|.+.|+++|+++|+ ||+++|
T Consensus 92 ~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~~----~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi 159 (377)
T 3ju7_A 92 PLAAIWCGL---EPYFIDISID-DWYMDKTVLWDKIEELKE----EVAIVV---PYATFGSWMNLEEYEELEK-KGVPVV 159 (377)
T ss_dssp HHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHHHHHGG----GEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBE
T ss_pred HHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHHHhcCCC----CceEEE---EECCCCCccCHHHHHHHHh-cCCEEE
Confidence 999999999 9999999753 6899999999998 4430 122444 4567899999999999999 999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCc
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 363 (506)
+|+||+.+..... +..-.....++.+++++||+++.+ ..|+++++++....+..... .+-... .+...
T Consensus 160 ~D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~g-~gG~~~~~~~~l~~~~~~~~-~~g~~~--------~~~~~ 227 (377)
T 3ju7_A 160 VDAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGIG-EGGLIYSKNEEDIQRIKRMG-NFGFDT--------NRECT 227 (377)
T ss_dssp EECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHT-BTTBCT--------TSCBC
T ss_pred EECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCCC-CcEEEEECCHHHHHHHHHHH-hcCCCC--------CCcee
Confidence 9999975543211 111011224566667789999974 56777777765432211110 000000 00000
Q ss_pred cccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c--------ceEEEeecCCCcccccc
Q 048643 364 QITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P--------SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 364 ~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p--------~~v~f~~~~~~~~~~~~ 431 (506)
.+...-+...+..++.+.. .+.+.+++++..++++++.+.|++++++. | ..+.++....
T Consensus 228 ~~g~~~~~~~~~aa~~~~~--l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 298 (377)
T 3ju7_A 228 MMGFNCKMSEYAAAIGIAT--MKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEE------- 298 (377)
T ss_dssp SSCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTT-------
T ss_pred eccccCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCCh-------
Confidence 1111122344555555443 47788899999999999999999887542 1 2334554321
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeee--eE------C-------------CEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHA--VC------G-------------GIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~-------------g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
...+++.+.|.++|+..-... .. . ....+|+.+ ++.+|++||+++++.
T Consensus 299 ----------~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~-~~~~t~~di~~v~~~ 367 (377)
T 3ju7_A 299 ----------VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL-WEGMTKEIVEQIVIC 367 (377)
T ss_dssp ----------SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHH
T ss_pred ----------hhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC-CCCCCHHHHHHHHHH
Confidence 013567788888887321111 00 0 145799987 688999999999999
Q ss_pred HHHHHH
Q 048643 491 VQEQLE 496 (506)
Q Consensus 491 l~~~~~ 496 (506)
|+++..
T Consensus 368 l~~~~~ 373 (377)
T 3ju7_A 368 LGQKVV 373 (377)
T ss_dssp HTC---
T ss_pred HHHHHh
Confidence 987754
No 138
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.83 E-value=3e-19 Score=184.83 Aligned_cols=310 Identities=10% Similarity=0.043 Sum_probs=205.7
Q ss_pred cccccChhhHHHHHHHHHHHHHHc-CCCCccccCCCCc---EEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeC
Q 048643 122 FNWISSPAATELENIVMDWLGQML-KLPKSFLFSGNGG---GVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGS 197 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~-g~~~~~~~~~~~~---g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s 197 (506)
..|....+..++++.+.+|+.+.. +.+.+ . .++|+||++|+..++.+..+ ++..|+++
T Consensus 82 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~~~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~ 143 (430)
T 2x5f_A 82 FPYAPPQGIEELRDLWQQKMLRDNPELSID-------NMSRPIVTNALTHGLSLVGDLFVN-----------QDDTILLP 143 (430)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHHCTTCCGG-------GBCCCEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred cccCCCCCCHHHHHHHHHHHhccCcccCCC-------ccceEEEcCCchHHHHHHHHHHhC-----------CCCEEEEc
Confidence 345444457889999888887764 33322 5 89999999999888776532 55678888
Q ss_pred CCCchHHHHHHHH-hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHH
Q 048643 198 DQTHCALQKAAQI-VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCD 273 (506)
Q Consensus 198 ~~~H~s~~ka~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ 273 (506)
..+|.++...++. .|. +++.+|.++++ +.+|+++|++++++. +..+.+|+++.++|+||.+-| +++|++
T Consensus 144 ~p~y~~~~~~~~~~~g~---~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 216 (430)
T 2x5f_A 144 EHNWGNYKLVFNTRNGA---NLQTYPIFDKD-GHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVE 216 (430)
T ss_dssp SSCCTHHHHHHTTTTCC---EEEEECCBCTT-SCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CCcCccHHHHHHHhcCC---eEEEEeccCcc-CCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence 8999999999998 899 99999987533 689999999999752 223557788889999999988 899999
Q ss_pred HHHH-----hCCEEEeecccccccccCccchh---hhcCCCCC---CeeEEcCccccCCC-CcceEEEE--eCchhHHhh
Q 048643 274 VAKQ-----FGIWVHVDAAYAGSACICPEFQH---FIDGVEGA---DSFSLNAHKWFFTT-LDCCCLWV--KDPSALVSS 339 (506)
Q Consensus 274 ia~~-----~g~~lhVDaA~gg~~~~~~~~~~---~~~gi~~a---Dsi~~~~hK~l~~p-~~~g~~~~--r~~~~l~~~ 339 (506)
+|++ ||+++++|++|+.+......... .+.+.... +.+..++||+++.| ..+|++++ +++... +.
T Consensus 217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~-~~ 295 (430)
T 2x5f_A 217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTK-EV 295 (430)
T ss_dssp HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHH-HH
T ss_pred HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHH-HH
Confidence 9999 99999999999876432211111 12222233 45678899999744 45788888 244332 22
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc-h----hHHHHHHHHHHHHHHHHHHHHH----cCC
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG-V----ANLRHFLRSHVNMAKLFERLVA----SDK 410 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G-~----~g~~~~i~~~~~~a~~l~~~l~----~~~ 410 (506)
+.......... .......+..+++...+. . +.++++.++..++++++.+.|+ +.
T Consensus 296 l~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~- 358 (430)
T 2x5f_A 296 LEAKVKGLIRS----------------NISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS- 358 (430)
T ss_dssp HHHHHHHHHHT----------------TTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-
T ss_pred HHHHHhhhhhc----------------ccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-
Confidence 22110000000 000012233344444332 1 2233377778888999999998 44
Q ss_pred CCc---c--ce-EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeECCEEEEEEEecCCCCCHHH
Q 048643 411 RVS---P--SA-VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINA-SGKAYMTHAVCGGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 411 ~~~---p--~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~~~~tt~ed 483 (506)
+++ | ++ +.+++.+. + ..++.+.|.+ .|+. +.+. +..++|++++. +++++
T Consensus 359 g~~~~~~~~g~~~~~~~~~~-----------~-------~~~~~~~l~~~~gi~-v~~g---~~~~iRis~~~--~~~e~ 414 (430)
T 2x5f_A 359 HWQAYDFNSGYFMAIKVHDV-----------D-------PEALRKHLIDKYSIG-VIAL---NATDIRIAFSC--VEKDD 414 (430)
T ss_dssp TEEECCCCBSSEEEEEESSS-----------C-------HHHHHHHHHHHHCEE-CEEC---SSSEEEEEGGG--SCGGG
T ss_pred CceeeCCCceEEEEeCCCCC-----------C-------HHHHHHHHHHhCCEE-EecC---CCCeEEEEEec--CCHHH
Confidence 565 3 33 56666421 0 2456666766 6764 4443 45689999963 47779
Q ss_pred HHHHHHHHHHHHHHH
Q 048643 484 VMVAWTMVQEQLEAF 498 (506)
Q Consensus 484 i~~li~~l~~~~~~l 498 (506)
|+++++.|+++.+++
T Consensus 415 i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 415 IPHVFDSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987765
No 139
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.83 E-value=2.6e-19 Score=187.29 Aligned_cols=326 Identities=14% Similarity=0.087 Sum_probs=187.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc-
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH- 201 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H- 201 (506)
.|...+...++++ ++++++|.+ ..++|+|||+|+..++.+++..... .|..+..|+++ ..|
T Consensus 71 ~y~~~~~~~~l~~----~la~~~~~~---------~v~~t~ggt~A~~~al~~~~~~~~~----~Gd~~~~viv~-~~~~ 132 (467)
T 1ax4_A 71 AYAGSRNYYDLKD----KAKELFNYD---------YIIPAHQGRGAENILFPVLLKYKQK----EGKAKNPVFIS-NFHF 132 (467)
T ss_dssp CSSSCHHHHHHHH----HHHHHHCCC---------EEEEESSHHHHHHHHHHHHHHHHHH----TTCCSSCEEEE-SSCC
T ss_pred ccccCccHHHHHH----HHHHHcCCC---------cEEEcCCcHHHHHHHHHHHHHhhcc----CCCccceEEEe-cccc
Confidence 4555565566654 566666652 6799999999999999988763211 11111114555 566
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCC----C----CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC-Ccc---cChh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTK----S----SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TAV---DPLK 269 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~----~----~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~i---dpl~ 269 (506)
.+...++...|. +++.++.+. + .++.+|+++|+++|++.. ...+.+|+++.+++++ |.+ ++++
T Consensus 133 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~ 207 (467)
T 1ax4_A 133 DTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLK 207 (467)
T ss_dssp HHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred chhhHHHhccCC---ceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHH
Confidence 455667788888 777765431 0 135799999999998642 0124578888888898 765 6689
Q ss_pred HHHHHHHHhCCEEEeeccccc-cccc--------Cc-cchhhhcC-CCCCCeeEEcCccccCCCCcceEEEEeCc-hhHH
Q 048643 270 PLCDVAKQFGIWVHVDAAYAG-SACI--------CP-EFQHFIDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDP-SALV 337 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg-~~~~--------~~-~~~~~~~g-i~~aDsi~~~~hK~l~~p~~~g~~~~r~~-~~l~ 337 (506)
+|+++|++||+|+|+|++++. +..+ .+ ........ ...+|++++++||+++.|.| |+++.+++ +...
T Consensus 208 ~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~ 286 (467)
T 1ax4_A 208 EVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFT 286 (467)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHH
T ss_pred HHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHH
Confidence 999999999999999998653 1110 00 00111000 02588999999999998754 66666645 4432
Q ss_pred hhhcCCccccCCccccCCCccCCCCccccCCCCCCch-HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 338 SSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSL-KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
........+ ... ..+ .+.....+ .+..++...- + .+.+++..++++++.+.|++ ++++
T Consensus 287 ~~~~~~~~~-~~~----------~~~---~~~~~~~~~a~~~~l~~~~-~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~ 348 (467)
T 1ax4_A 287 LARQRCVPM-EGF----------VTY---GGLAGRDMAAMVQGLEEGT-E--EEYLHYRIGQVKYLGDRLRE-AGIPIQY 348 (467)
T ss_dssp HHHHHHHHH-TCS----------TTT---TTCCHHHHHHHHHHHHHTT-C--HHHHHHHHHHHHHHHHHHHH-TTCCBCS
T ss_pred HHHhhcccc-ccc----------ccc---CCccchHHHHHHHHHHHhh-h--hhHHHHHHHHHHHHHHHHHh-CCCCccc
Confidence 211111001 000 000 01110111 1111333221 1 23445556778889999987 4665
Q ss_pred c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeE-------------CCEEEEEEEecC
Q 048643 414 P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESI-NASGKAYMTHAVC-------------GGIYAMRFAVGA 476 (506)
Q Consensus 414 p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~-------------~g~~~lR~~~~~ 476 (506)
| ..+.+....-. ... . . . .....++.++| .+.|+........ .+..++|+++..
T Consensus 349 ~~~~~~~~~~~~~~~-~~~----~-~-~--~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~ 419 (467)
T 1ax4_A 349 PTGGHAVFVDCKKLV-PQI----P-G-D--QFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIAR 419 (467)
T ss_dssp SCCSSEEEEESTTTC-TTS----C-G-G--GCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCT
T ss_pred CCCceEEEEehhhhc-ccc----c-c-C--CCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEeccc
Confidence 4 44555521000 000 0 0 0 00134566776 6677654331211 013789999864
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q 048643 477 TLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 477 ~~tt~edi~~li~~l~~~~~~l~ 499 (506)
..++++||+++++.|+++.+++.
T Consensus 420 ~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 420 RVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp TSSCHHHHHHHHHHHHTTHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHHHhhh
Confidence 55889999999999999887753
No 140
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.83 E-value=4.6e-19 Score=181.20 Aligned_cols=287 Identities=12% Similarity=0.026 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+++++++|.+.+ ..++++||++|+..++.+++... + ++.+|+.+...|.+...++...
T Consensus 87 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~~a~~~al~~~~~~~--~------~~~vi~~~~~y~~~~~~~~~~~ 151 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHT--G------RKKFVAAMRGFSGRTMGSLSVT 151 (395)
T ss_dssp HHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHH--S------CCEEEEETTCCCCSSHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCCcC-------EEEEcCcHHHHHHHHHHHHHHHh--C------CCeEEEEcCCcCCCchhhhhhc
Confidence 4556677888888876544 68999999999999988765321 0 3445555555566666677666
Q ss_pred CCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHh
Q 048643 212 GIDL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQF 278 (506)
Q Consensus 212 G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~ 278 (506)
|... ..+..+| ..|+++|+++|++. +.+|+++..++++|.+.| +++|+++|++|
T Consensus 152 g~~~~~~~~~p~~~~~~~~~-------~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~ 218 (395)
T 1vef_A 152 WEPKYREPFLPLVEPVEFIP-------YNDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEK 218 (395)
T ss_dssp CCHHHHGGGCSCSSCEEEEC-------TTCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCCCCeeEeC-------CCcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHc
Confidence 6510 0133333 25899999988642 446777777788999877 99999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
|+++|+|++|+++............++ .+|.++ +||+++.+.++|++++++. +.+.+... .+.
T Consensus 219 ~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~s--~sK~~~~g~~~G~~~~~~~--~~~~l~~~-~~~----------- 281 (395)
T 1vef_A 219 GALLILDEIQTGMGRTGKRFAFEHFGI-VPDILT--LAKALGGGVPLGVAVMREE--VARSMPKG-GHG----------- 281 (395)
T ss_dssp TCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECGGGGTTSSCEEEEEEHH--HHHTSCTT-SSC-----------
T ss_pred CCEEEEEecccCCccCCchhHhhhcCC-CCCEEE--EcccccCCCceEEEEehHH--HHhhhccC-CcC-----------
Confidence 999999999985321111111111222 467764 4999998889999998754 33333210 000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC--Cc---c--ceEEEeecCCCcccccc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR--VS---P--SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~--~~---p--~~v~f~~~~~~~~~~~~ 431 (506)
. +. .........+..+++.+.. .++.++..++++++.+.|++.+. +. + +++.|++...
T Consensus 282 --~--~~-~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~------- 346 (395)
T 1vef_A 282 --T--TF-GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEK------- 346 (395)
T ss_dssp --C--SS-TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSC-------
T ss_pred --C--Cc-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcCh-------
Confidence 0 00 0001111233344444432 34677888899999999988742 21 2 6777776432
Q ss_pred cccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.|. +.|+. +.+. +..++|+++ +..+++++++++++.|+++.
T Consensus 347 ------------~~~l~~~l~~~~gi~-v~~~---~~~~iRi~~-~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 347 ------------AAPYIARLEKEHRVL-ALQA---GPTVIRFLP-PLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp ------------SHHHHHHHHHHHCEE-CEES---STTEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHCCeE-EecC---CCCEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 134566666 66764 4432 356899997 46788899999999998764
No 141
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.83 E-value=2.8e-19 Score=180.51 Aligned_cols=277 Identities=12% Similarity=0.093 Sum_probs=188.5
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+++++++|.+.+ ..++|+||++|+..++.+... ++..|+++..+|.++...++..|.
T Consensus 69 ~lr~~la~~~g~~~~-------~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~-- 128 (360)
T 3hdo_A 69 KLREVAGELYGFDPS-------WIIMANGSDEVLNNLIRAFAA-----------EGEEIGYVHPSYSYYGTLAEVQGA-- 128 (360)
T ss_dssp HHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHhCcCcc-------eEEEcCCHHHHHHHHHHHHhC-----------CCCEEEEcCCChHHHHHHHHHCCC--
Confidence 344566777786554 789999999999888776532 456788888999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccccC
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 295 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~~~ 295 (506)
+++.+|.++ ++.+ ++|++++ .+.+|+++.++|++|.+-|+++|.++|+++|+++++|++|+.+.-
T Consensus 129 -~~~~v~~~~--~~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~-- 193 (360)
T 3hdo_A 129 -RVRTFGLTG--DFRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAE-- 193 (360)
T ss_dssp -EEEEECBCT--TSSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSS--
T ss_pred -EEEEeeCCC--CCCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCC--
Confidence 999999874 3455 4443322 123788888999999999999999999999999999999986421
Q ss_pred ccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCch
Q 048643 296 PEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSL 374 (506)
Q Consensus 296 ~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al 374 (506)
........ ....+.+..+++|+++ ....+|+++. +++. .+.+...... ++ ...+
T Consensus 194 ~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~-~~~~~~~~~~----------------~~------~~~~ 248 (360)
T 3hdo_A 194 SNALELVR-RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEV-IAALDKIRDH----------------YN------LDRL 248 (360)
T ss_dssp CCCTHHHH-HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHH-HHHHHHHSCS----------------CC------SCHH
T ss_pred cchhHHhc-cCCCEEEEecchHhhcCCccceeeEee-CHHH-HHHHHHhCCC----------------CC------CCHH
Confidence 11111111 1134466778999987 4467888877 3333 2222110000 00 1223
Q ss_pred HHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHHHH
Q 048643 375 KLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELL 448 (506)
Q Consensus 375 ~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 448 (506)
..+++...+. .+.++++.++..++++++.+.|++. +++ | +.+.+++... ...++.
T Consensus 249 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~------------------~~~~l~ 309 (360)
T 3hdo_A 249 AQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVIPSQGNYLFATPPDR------------------DGKRVY 309 (360)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSEEEEECTTC------------------CHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEcCCCccEEEEECCCC------------------CHHHHH
Confidence 3333333332 3467888899999999999999988 776 3 6666655422 124566
Q ss_pred HHHHhcCcEEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 449 ESINASGKAYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 449 ~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+.|.+.|+. +.+.. ..+..++|+++. +++|+++++++|+++.+
T Consensus 310 ~~l~~~gi~-v~~~~~~~~~~~iRis~~----~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 310 DGLYARKVL-VRHFSDPLLAHGMRISIG----TREEMEQTLAALKEIGE 353 (360)
T ss_dssp HHHHHTTEE-CBCCCSTTTTTSEEEECC----CHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCEE-EEECCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHhc
Confidence 777777864 44332 234578999984 77899999999998864
No 142
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.83 E-value=5.7e-19 Score=178.22 Aligned_cols=274 Identities=11% Similarity=0.094 Sum_probs=187.3
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCCchHHHHHHHHhCCCC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
+.+.+++.+|.+.+ ..++++|+++++..++.+... ++ ..|+++..+|.++..+++..|.
T Consensus 63 lr~~la~~~~~~~~-------~v~~~~G~~~ai~~~~~~~~~-----------~g~d~Vl~~~p~~~~~~~~~~~~g~-- 122 (356)
T 1fg7_A 63 VIENYAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV-- 122 (356)
T ss_dssp HHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHHHHHTC--
T ss_pred HHHHHHHHhCCChH-------HEEEcCCHHHHHHHHHHHHhC-----------CCCCEEEEeCCChHHHHHHHHHcCC--
Confidence 33456666687654 689999999999877776532 44 6788889999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHH---HHHHHhCCEEEeeccccccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLC---DVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~---~ia~~~g~~lhVDaA~gg~~ 292 (506)
+++.+|.++ ++.+|+++|+++++ . +.+|+++.++|+||.+-|.++|. ++|+ +|+++++|++|+.+.
T Consensus 123 -~~~~v~~~~--~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~ 191 (356)
T 1fg7_A 123 -ECRTVPTLD--NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFC 191 (356)
T ss_dssp -EEEECCCCT--TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGS
T ss_pred -EEEEeeCCC--CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhc
Confidence 999999873 57899999998885 2 34778889999999997765554 5555 899999999998654
Q ss_pred ccCccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCccccCCCC
Q 048643 293 CICPEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQITLSRR 370 (506)
Q Consensus 293 ~~~~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 370 (506)
. ......... ....+.+..+++|+++. ...+|+++++ ++.. +.+.. ...| .
T Consensus 192 ~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~l~~~~~~~-----------------------~ 244 (356)
T 1fg7_A 192 P-QASLAGWLA-EYPHLAILRTLSKAFALAGLRCGFTLAN-EEVI-NLLMKVIAPY-----------------------P 244 (356)
T ss_dssp G-GGCSGGGTT-TCTTEEEEEESSSTTCCGGGCCEEEEEC-HHHH-HHHHHHSCSS-----------------------C
T ss_pred C-CCcHHHHHh-hCCCEEEEecchHhhcCchhhhEEEEeC-HHHH-HHHHHhcCCC-----------------------C
Confidence 1 111111111 11346777899999974 3457888874 3332 22321 1001 1
Q ss_pred CCchHHHHHHHHhchhH---HHHHHHHHHHHHHHHHHHHHcCCCC-c--c---ceEEEeecCCCcccccccccchHHHHH
Q 048643 371 FRSLKLWLVIRNYGVAN---LRHFLRSHVNMAKLFERLVASDKRV-S--P---SAVMDKLKPKYENCHSQQLVTEEEAIN 441 (506)
Q Consensus 371 ~~al~~~~~l~~~G~~g---~~~~i~~~~~~a~~l~~~l~~~~~~-~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~ 441 (506)
...+..+++...+...+ ++++.++..++++++.+.|++++++ . | +.+.+++. .
T Consensus 245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~----------------- 306 (356)
T 1fg7_A 245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK-A----------------- 306 (356)
T ss_dssp SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET-T-----------------
T ss_pred CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC-C-----------------
Confidence 13344555666665444 6788888899999999999998653 3 4 66666653 2
Q ss_pred HHHHHHHHHHHhcCcEEEee-eeECC-EEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 442 EFNRELLESINASGKAYMTH-AVCGG-IYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 442 ~~~~~l~~~l~~~g~~~~~~-~~~~g-~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
..++.+.|.+.|+. +.+ ....+ ..++|+++. +++++++++++|++
T Consensus 307 --~~~l~~~L~~~gI~-v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 307 --SSAVFKSLWDQGII-LRDQNKQPSLSGCLRITVG----TREESQRVIDALRA 353 (356)
T ss_dssp --HHHHHHHHHHTTEE-CEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHCCEE-EEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHh
Confidence 24566777677864 444 32222 348999984 47799999998875
No 143
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.83 E-value=1.1e-18 Score=180.45 Aligned_cols=319 Identities=12% Similarity=0.063 Sum_probs=201.3
Q ss_pred HHHHHHHHhhcCCCCccccc-ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVVGFNWIS-SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~~~~~~-~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...+... .|.. ++...++++. +++++|.+ ..++|+|||+|+..++.+++
T Consensus 32 ~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~l~~l~-------- 88 (424)
T 2po3_A 32 ARLYERLDRALDSQ--WLSNGGPLVREFEER----VAGLAGVR---------HAVATCNATAGLQLLAHAAG-------- 88 (424)
T ss_dssp HHHHHHHHHHHHHT--CCSSSCHHHHHHHHH----HHHHHTSS---------EEEEESCHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHhcC--CcccCCHHHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHcC--------
Confidence 33444455444332 2433 4566666655 45555553 57999999999988887652
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|++++++. +.+|+++ +++|.+
T Consensus 89 ----~gd~Vlv~~~~~~~~~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~tG~~ 151 (424)
T 2po3_A 89 ----LTGEVIMPSMTFAATPHALRWIGL---TPVFADIDPD-TGNLDPDQVAAAVTPR------TSAVVGV---HLWGRP 151 (424)
T ss_dssp ----CCSEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TSSBCHHHHGGGCCTT------EEEEEEE---CGGGCC
T ss_pred ----CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhhCcC------CcEEEEE---CCCCCc
Confidence 235688889999999999999999 9999999753 5789999999988643 3355554 378999
Q ss_pred cChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCc--cccCCCCcceEEEEeCchhHHhhhcCC
Q 048643 266 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 266 dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~ 343 (506)
.++++|+++|++||+++++|++|+.++.... +. +. ...|.++.++| |++.. ..+|+++.++++... .+...
T Consensus 152 ~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~--~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~-~l~~~ 224 (424)
T 2po3_A 152 CAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AG--SLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAA-RIRAL 224 (424)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TT--SSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHH-HHHHH
T ss_pred CCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-cc--cccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHH-HHHHH
Confidence 9999999999999999999999984333221 11 11 12477777766 87765 567777776554332 22110
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-----
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P----- 414 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p----- 414 (506)
..+.... .+... ......++..+..+.++.. .++++++.++..++++++.+.|+++++++ |
T Consensus 225 ~~~~~~~------~~~~~--~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 294 (424)
T 2po3_A 225 HNFGFDL------PGGSP--AGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLN 294 (424)
T ss_dssp HBTTTTC------TTCCT--TCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCC
T ss_pred HhcCccc------ccccc--ccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcc
Confidence 0000000 00000 1112223445555555543 46778888999999999999999887776 2
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-C--------C------EE-------EE
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC-G--------G------IY-------AM 470 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~--------g------~~-------~l 470 (506)
.++.+++.+. .......++.+.|.+.|+. +.+... . + .. .+
T Consensus 295 ~~~~~~i~~~~~--------------~~~~~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l 359 (424)
T 2po3_A 295 NHQYVIVEIDEA--------------TTGIHRDLVMEVLKAEGVH-TRAYFSPGCHELEPYRGQPHAPLPHTERLAARVL 359 (424)
T ss_dssp CCCCEEEEECHH--------------HHSSCHHHHHHHHHHTTEE-CBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEE
T ss_pred ccEEEEEEECCc--------------cchhhHHHHHHHHHHCCCc-eecccCCccccchhhhhcCCCCChhHHHHhcCEE
Confidence 1233444210 0000124566677777764 333100 0 0 11 27
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 471 RFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
|+++ +..++++||++++++|+++.++.
T Consensus 360 ~l~~-~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 360 SLPT-GTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp EECC-STTCCHHHHHHHHHHHHHHHHHH
T ss_pred EeeC-CCCCCHHHHHHHHHHHHHHHhhh
Confidence 7765 57788999999999999876554
No 144
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.83 E-value=2.1e-19 Score=184.56 Aligned_cols=334 Identities=10% Similarity=0.019 Sum_probs=208.5
Q ss_pred HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 107 GFLGEMLSSGFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 107 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
..+.+.+...+... ...|....+..++++.+.+|+.+.+|.+... ....++|+||++++..++.+...
T Consensus 39 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------- 107 (410)
T 3e2y_A 39 SYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP----NEEILVAVGAYGSLFNSIQGLVD------- 107 (410)
T ss_dssp HHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC-------
Confidence 33444444444332 2244444456889999999999998875421 02789999999999888776532
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCC---------CCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTK---------SSSYGLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~---------~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
++..|+++..+|.++...++..|. +++.+|.++ ..++.+|+++|++++++. +.+|+++
T Consensus 108 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~ 174 (410)
T 3e2y_A 108 ----PGDEVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILN 174 (410)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEEE
T ss_pred ----CCCEEEEeCCCchhhHHHHHHcCC---EEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEEe
Confidence 456677888899999999999999 999999862 135689999999988543 4478888
Q ss_pred ccCCCCCcc---cChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccC-CCCcceEEEE
Q 048643 257 IGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFF-TTLDCCCLWV 330 (506)
Q Consensus 257 ~gtt~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~ 330 (506)
.++|++|.+ +++++|+++|++||+++++|++|+++..-....... +.+....+.+..+++|.++ ....+|+++.
T Consensus 175 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~ 254 (410)
T 3e2y_A 175 TPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG 254 (410)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEEC
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEE
Confidence 999999999 689999999999999999999997654321111111 1111123356678899997 4567888876
Q ss_pred eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHH------hchhHHHHHHHHHHHHHHHHHH
Q 048643 331 KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRN------YGVANLRHFLRSHVNMAKLFER 404 (506)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~------~G~~g~~~~i~~~~~~a~~l~~ 404 (506)
++. .. ..+.....+. .+ .........+..+++. ...+.++++.++..++++++.+
T Consensus 255 ~~~-~~-~~~~~~~~~~--------------~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 315 (410)
T 3e2y_A 255 PAH-LI-KHLQTVQQNS--------------FY---TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVR 315 (410)
T ss_dssp CHH-HH-HHHHHHHHTT--------------TC---CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CHH-HH-HHHHHHHHhh--------------cc---CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 543 22 2221100000 00 0000111222233331 1256788888999999999999
Q ss_pred HHHcCCCCc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeEC-------CEEEE
Q 048643 405 LVASDKRVS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESI-NASGKAYMTHAVCG-------GIYAM 470 (506)
Q Consensus 405 ~l~~~~~~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~-------g~~~l 470 (506)
.|++. +++ | ..+.+.+..... ..... ..+ .....++.+.+ .+.|+....+..+. +..++
T Consensus 316 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~----~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~i 388 (410)
T 3e2y_A 316 LLNSV-GLKPIVPDGGYFIIADVSSLGA-DLSDM-NSD----EPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLV 388 (410)
T ss_dssp HHHTT-TCEEEBCSBSSEEEEECGGGCC-CCTTC-CSS----CCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEE
T ss_pred HHHHC-CCeecCCCccEEEEEEchhhhc-ccccc-ccc----ccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEE
Confidence 99988 776 4 344444432100 00000 000 00012344444 34576443333232 34789
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 048643 471 RFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~ 493 (506)
|++++. ++++|+++++.|++
T Consensus 389 Ris~~~---~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 389 RFCFIK---KDSTLDAAEEIFRA 408 (410)
T ss_dssp EEECCC---CHHHHHHHHHHHHT
T ss_pred EEEEcC---CHHHHHHHHHHHHh
Confidence 999853 88899999998875
No 145
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.83 E-value=5.2e-18 Score=176.86 Aligned_cols=314 Identities=13% Similarity=0.085 Sum_probs=193.1
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc-
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH- 201 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H- 201 (506)
.|..++...++++. +++++|.+ ..++|+|||+|+..++.++.. ++. +++..+|
T Consensus 70 ~y~~~~~~~~l~~~----la~~~~~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd--i~~~~~~~ 123 (456)
T 2ez2_A 70 AYAGSENFYHLERT----VQELFGFK---------HIVPTHQGRGAENLLSQLAIK-----------PGQ--YVAGNMYF 123 (456)
T ss_dssp CSSSCHHHHHHHHH----HHHHHCCS---------EEEEESSHHHHHHHHHHHHCC-----------TTC--EEEESSCC
T ss_pred hcccChhHHHHHHH----HHHHhCCC---------cEEEeCCcHHHHHHHHHHhCC-----------CCC--Eecccccc
Confidence 45566666777665 55555653 579999999999988877632 333 4456677
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCC----C----CcccCHHHHHHHHHHHHhcCCccEEEEEeccCC-CCCcccC---hh
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKS----S----SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT-AITAVDP---LK 269 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~----~----~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt-~tG~idp---l~ 269 (506)
.++..++...|. +++.++++++ . ++.+|+++|+++|++.++ ..+.+|+++.+++ ++|.+-| ++
T Consensus 124 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~ 198 (456)
T 2ez2_A 124 TTTRYHQEKNGA---VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMR 198 (456)
T ss_dssp HHHHHHHHHTTC---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred chhHHHHHHcCC---EEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHH
Confidence 788889999999 8999988731 1 268999999999987541 1234677777777 8998866 99
Q ss_pred HHHHHHHHhCCEEEeecccccc---------cccCccc-hhhh--cCCCCCCeeEEcCccccCCCCcceEEEEeCchhHH
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGS---------ACICPEF-QHFI--DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALV 337 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~---------~~~~~~~-~~~~--~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 337 (506)
+|+++|++||+|+|+|++|+.+ ....... .... .+ ...|.+++++||+++.| .+|+++.+++....
T Consensus 199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~ 276 (456)
T 2ez2_A 199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF-SYADGCTMSGKKDCLVN-IGGFLCMNDDEMFS 276 (456)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH-TTCSEEEEETTTTTCCS-SCEEEEESCHHHHH
T ss_pred HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc-ccCCEEEEeCcccCCCC-ceeEEEECCHHHHH
Confidence 9999999999999999999763 1111111 0000 01 24688888899998755 46777775654432
Q ss_pred hhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHH-HHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 338 SSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANL-RHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 338 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~-~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
.+.....+.... ....+.+...+.. +++... +.+ .+.+++..++++++.+.|++. +++
T Consensus 277 -~~~~~~~~~~~~-------------~~~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 338 (456)
T 2ez2_A 277 -SAKELVVVYEGM-------------PSYGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVE 338 (456)
T ss_dssp -HHHHHHHHHTCC-------------TTTTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCS
T ss_pred -HHHHHHhhccCc-------------ccccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCcccc
Confidence 221100000000 0000101111111 011111 223 466777788889999999885 665
Q ss_pred c---ceEEEeecC--CCcccccccccchHHHHHHH-HHHHHHHH-HhcCcEEEeeee-------------ECCEEEEEEE
Q 048643 414 P---SAVMDKLKP--KYENCHSQQLVTEEEAINEF-NRELLESI-NASGKAYMTHAV-------------CGGIYAMRFA 473 (506)
Q Consensus 414 p---~~v~f~~~~--~~~~~~~~~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~-------------~~g~~~lR~~ 473 (506)
| ..+.+.+.. .+. +. .++ .+.+.++| .+.|+..+.... ..+..++|++
T Consensus 339 p~~~~~~~~~~~~~~~~~---------~~---~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis 406 (456)
T 2ez2_A 339 PVGGHAVFLDARRFCEHL---------TQ---DEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLT 406 (456)
T ss_dssp SCCSSEEEEEHHHHTTTS---------CG---GGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEE
T ss_pred CCCceEEEEEhHHhcCCC---------Ch---hhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEE
Confidence 4 444444421 100 00 122 34556666 456765433221 1224689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 474 VGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 474 ~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
+....+++++|+++++.|+++.++..
T Consensus 407 ~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 407 IPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp CCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred eCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 96543789999999999999887643
No 146
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.82 E-value=8.2e-18 Score=167.81 Aligned_cols=278 Identities=10% Similarity=0.032 Sum_probs=189.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHH
Q 048643 127 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQK 206 (506)
Q Consensus 127 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~k 206 (506)
.+...+++ +.+++++|.+.+ ..++|+|+++++..++.+. ++..|+++..+|.++..
T Consensus 50 ~~~~~~lr----~~la~~~~~~~~-------~i~~t~G~~~~l~~~~~~~-------------~gd~vl~~~p~~~~~~~ 105 (337)
T 3p1t_A 50 FDAEPRVM----RKLAEHFSCPED-------NLMLVRGIDECFDRISAEF-------------SSMRFVTAWPGFDGYRA 105 (337)
T ss_dssp TTHHHHHH----HHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHS-------------TTSEEEEESSSCSHHHH
T ss_pred CCchHHHH----HHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHhc-------------CCCeEEEeCCCcHHHHH
Confidence 34444444 566777788654 6899999988887665543 23467788899999999
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
.++..|+ +++.+|.++ ++.+|+++|+++. .+.+|+++.++|+||.+-|+++|.++|+++++ +++|+
T Consensus 106 ~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDe 171 (337)
T 3p1t_A 106 RIAVSGL---RHFEIGLTD--DLLLDPNDLAQVS--------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDE 171 (337)
T ss_dssp HHTTSCC---EEEEECBCT--TSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEEC
T ss_pred HHHHcCC---EEEEecCCC--CCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEEC
Confidence 9999999 999999875 5799999998751 24588899999999999999999999999997 56699
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQI 365 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (506)
+|+.+....+. .......+.+..+++|+++ .+..+|+++.++ ... ..+.....+.
T Consensus 172 a~~~~~~~~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~~~~~------------------ 227 (337)
T 3p1t_A 172 TYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAGLRLGALFGPS-ELI-AAMKRKQWFC------------------ 227 (337)
T ss_dssp TTGGGSSCSSS----CCCCBTTEEEEEESSSTTCCTTTCCEEEECCH-HHH-HHHHTTSCTT------------------
T ss_pred CChhhcccccc----ccccCCCEEEEeeCchhccCcchheEEEEeCH-HHH-HHHHhhcCCC------------------
Confidence 99764321110 1122356678889999997 557788877643 322 2332110000
Q ss_pred cCCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHH
Q 048643 366 TLSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEA 439 (506)
Q Consensus 366 ~~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~ 439 (506)
....+...+....+. .+.+.+.+++..++++++.+.|++. +++ | +++.|.....
T Consensus 228 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--------------- 287 (337)
T 3p1t_A 228 ----NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVASSEANFVLVENAAG--------------- 287 (337)
T ss_dssp ----CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSEEEEECTTT---------------
T ss_pred ----CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEECCCCCeEEEEEcCCH---------------
Confidence 011222233333332 2356777888888899999999987 676 3 6666654321
Q ss_pred HHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 440 INEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 440 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..+.+.|.+.|+....+..+....++|++++ +++++++++++|+++.
T Consensus 288 -----~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 288 -----ERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYS 334 (337)
T ss_dssp -----HHHHHHHHHTTEECEEGGGGTCCSEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHCCeEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence 2445566677764433333333578999985 6789999999998875
No 147
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.82 E-value=8.8e-19 Score=181.70 Aligned_cols=276 Identities=13% Similarity=0.105 Sum_probs=184.7
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH----HHH
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA----AQI 210 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka----~~~ 210 (506)
.++.+++++++|.+ ..+++++|++|+..++.+... ++..|+++...|.++... ++.
T Consensus 117 ~~l~~~lA~l~g~~---------~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~~ 176 (445)
T 1qgn_A 117 VVLEEKISALEGAE---------STLLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYRKTRIFIETILPK 176 (445)
T ss_dssp HHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHHHHH
Confidence 34446677888875 246666677888887765432 456778888889887764 445
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|+ +++.+|.+ |+++|+++|++++ +.+|+++.++|++|.+.|+++|+++|++||+++|||++|+.
T Consensus 177 ~G~---~v~~v~~~-------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~ 241 (445)
T 1qgn_A 177 MGI---TATVIDPA-------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFAT 241 (445)
T ss_dssp GTC---EEEEECSS-------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC
T ss_pred cCC---EEEEeCCC-------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcc
Confidence 688 88888753 8999999998643 24888899999999999999999999999999999999986
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCC--cceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
+....+ . . .++|.++.++||+++.+. .+|+++.++ +.+ ..+.. +.. . .+
T Consensus 242 ~~~~~~-~-----~-~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~-~~l~~---~~~---------------~--~g 292 (445)
T 1qgn_A 242 PLNQKA-L-----A-LGADLVLHSATKFLGGHNDVLAGCISGPL-KLV-SEIRN---LHH---------------I--LG 292 (445)
T ss_dssp TTTCCT-T-----T-TTCSEEEECTTTTTTCSSSCCCEEEEECH-HHH-HHHHH---HHH---------------H--HC
T ss_pred cccCCc-c-----c-cCCEEEEECCcccccccccceEEEEEECH-HHH-HHHHH---HHH---------------H--hC
Confidence 543322 1 1 168999999999998553 378877754 222 22210 000 0 00
Q ss_pred CCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c-------------------ceEEEeecCCC
Q 048643 369 RRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P-------------------SAVMDKLKPKY 425 (506)
Q Consensus 369 r~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p-------------------~~v~f~~~~~~ 425 (506)
-...++..|..++. .+.+..++++..++++++.+.|++.|+++ | ++++|.+.+.
T Consensus 293 ~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~- 369 (445)
T 1qgn_A 293 GALNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD- 369 (445)
T ss_dssp CCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-
T ss_pred CCCCHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-
Confidence 11234456766654 46677788888889999999999887652 1 4677877542
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCc------E---EEeeee------------ECC--EEEEEEEecCCCCCHH
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGK------A---YMTHAV------------CGG--IYAMRFAVGATLTEER 482 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~------~---~~~~~~------------~~g--~~~lR~~~~~~~tt~e 482 (506)
.+...++.+.+...++ + ...+.. ..| ...+|+++. .|
T Consensus 370 ---------------~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG-----~E 429 (445)
T 1qgn_A 370 ---------------LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG-----VE 429 (445)
T ss_dssp ---------------HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC-----SS
T ss_pred ---------------HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec-----cC
Confidence 1223455555532111 1 000000 012 368999995 34
Q ss_pred HHHHHHHHHHHHHHH
Q 048643 483 HVMVAWTMVQEQLEA 497 (506)
Q Consensus 483 di~~li~~l~~~~~~ 497 (506)
|++.+++.|+++.+.
T Consensus 430 did~li~~L~~al~~ 444 (445)
T 1qgn_A 430 DFDDLKADILQALDS 444 (445)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 899999999988754
No 148
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.82 E-value=3.2e-18 Score=176.39 Aligned_cols=327 Identities=8% Similarity=-0.021 Sum_probs=207.2
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhc
Q 048643 106 AGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 185 (506)
Q Consensus 106 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~ 185 (506)
+..+.+.+..........|....+..++++.+.+|+....+.+.. ...++|+||++|+..++.+..+
T Consensus 58 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~i~~t~g~~~al~~~~~~l~~------- 124 (418)
T 3rq1_A 58 LKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH------IRSIATAGGTGGIHHLIHNYTE------- 124 (418)
T ss_dssp CHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHHHHHHHHHHHSC-------
T ss_pred cHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc------ccEEECCchHHHHHHHHHHhcC-------
Confidence 333455555544333334555556789999999999887764321 2689999999999888776533
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecc-CCCCCc
Q 048643 186 RENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIG-TTAITA 264 (506)
Q Consensus 186 ~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~ 264 (506)
++..|+++..+|.++..+++..|. +++.+|++++ ++.+|+++|++++++..... ...+|+++.+ +|+||.
T Consensus 125 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~ 195 (418)
T 3rq1_A 125 ----PGDEVLTADWYWGAYRVICSDTGR---TLVTYSLFDE-HNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGY 195 (418)
T ss_dssp ----TTCEEEEESSCCTHHHHHHHHTTC---EEEEECSBCT-TSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCC
T ss_pred ----CCCEEEECCCCchhHHHHHHHcCC---EEEEEeeeCC-CCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCC
Confidence 566788889999999999999999 9999998643 47999999999998642211 1236777777 899999
Q ss_pred ccChh---HHHHHHH------HhCCEEEeecccccccccCccchhh---hcCCCCCC---eeEEcCccccCCC-CcceEE
Q 048643 265 VDPLK---PLCDVAK------QFGIWVHVDAAYAGSACICPEFQHF---IDGVEGAD---SFSLNAHKWFFTT-LDCCCL 328 (506)
Q Consensus 265 idpl~---~I~~ia~------~~g~~lhVDaA~gg~~~~~~~~~~~---~~gi~~aD---si~~~~hK~l~~p-~~~g~~ 328 (506)
+-|.+ +|+++|+ +||+++++|++|.++.......... ..++ .-| .++.+++|.++.| ...|++
T Consensus 196 ~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~ 274 (418)
T 3rq1_A 196 SIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHL-PKEILTCVCYSLSKGFTMYGQRVGAM 274 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTC-CTTEEEEEEEESTTTTTCCSSCCEEE
T ss_pred CCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhc-CCCceEEEEEeCCCCCcCcCCcceEE
Confidence 97755 4555565 8999999999996654211111111 1111 123 4556899998744 667888
Q ss_pred EE--eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch--------hHHHHHHHHHHHH
Q 048643 329 WV--KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV--------ANLRHFLRSHVNM 398 (506)
Q Consensus 329 ~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~--------~g~~~~i~~~~~~ 398 (506)
+. ++++.. +.+.....+.... .......+...+....+.. +..+++.++..++
T Consensus 275 ~~~~~~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 337 (418)
T 3rq1_A 275 IGISDDEEIA-DEFFEVNKSTSRA----------------TWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDR 337 (418)
T ss_dssp EEEESSHHHH-HHHHHHHHHHHHH----------------HTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCHHHH-HHHHHHHHHHHhh----------------ccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 76 344432 2222111111000 0000122333344443322 1233556677788
Q ss_pred HHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEE
Q 048643 399 AKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFA 473 (506)
Q Consensus 399 a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~ 473 (506)
++++.+.|++. +++ | +.+.|.-.+. ..++.+.|.+.|+. +.+. ..++|++
T Consensus 338 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~gi~-v~~g----~~~iRis 392 (418)
T 3rq1_A 338 ADIFKQEAAQV-GLPMLPYRGGFFITIPTDS-------------------ANAICEELKKEHIY-VIAL----ANGIRIA 392 (418)
T ss_dssp HHHHHHHHHHH-TCCCCCCCSSSEEEEECTT-------------------HHHHHHHHHHTTEE-CEEC----SSEEEEE
T ss_pred HHHHHHHHHhc-CCCCCCCCceEEEEcCCCC-------------------HHHHHHHHHhCCEE-EecC----CCCeEEE
Confidence 88899999877 666 3 4444421121 23455667677764 4432 3579999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 474 VGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 474 ~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
++ ..++++|+++++.|+++.+++.
T Consensus 393 ~~--~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 393 AC--GIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp GG--GSCHHHHTTHHHHHHHHHHHTT
T ss_pred Ee--cCCHHHHHHHHHHHHHHHHHHh
Confidence 74 3578899999999999887754
No 149
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.82 E-value=3.8e-19 Score=183.82 Aligned_cols=229 Identities=16% Similarity=0.116 Sum_probs=161.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++| +++++++|.+ ..+++++|++|+..++.+... ++..|+++...|.+..
T Consensus 80 ~~p~~~~le----~~lA~l~g~~---------~~v~~~sG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~~~ 135 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGAL---------GVLALGSGMAAISTAILTLAR-----------AGDSVVTTDRLFGHTL 135 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred CCHHHHHHH----HHHHHHHCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHH
Confidence 445555555 5577787865 357778889998877776532 5667888999998877
Q ss_pred H----HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 K----AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
. .+...|+ +++.||.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 136 ~~~~~~~~~~G~---~~~~v~~~-------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~ 199 (430)
T 3ri6_A 136 SLFQKTLPSFGI---EVRFVDVM-------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIP 199 (430)
T ss_dssp HHHHTHHHHTTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHcCC---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 7 6678898 88888864 899999998654 44888999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC--CcceEEEEeCchhHH---------hhhcCCccccCCc
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT--LDCCCLWVKDPSALV---------SSLSTNPEYLKNK 350 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p--~~~g~~~~r~~~~l~---------~~~~~~~~yl~~~ 350 (506)
++||++|+.+....+. . .++|.++.+++|+++.| ..+|+++++....+. +.+. ...|+...
T Consensus 200 livD~a~~~~~~~~~~--~-----~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g-~~~~i~~~ 271 (430)
T 3ri6_A 200 LVVDTTMTPPYLLEAK--R-----LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG-PMAFLYKA 271 (430)
T ss_dssp EEEECTTSCTTTCCGG--G-----GTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG-GGHHHHHH
T ss_pred EEEECCCcccccCChH--H-----cCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc-hhhHHHHH
Confidence 9999999866553321 1 16899999999999876 345666654432210 0000 00111000
Q ss_pred cccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
. ..+....+....++..|+.++ |.+.+..++++..++++++.+.|++.|+++
T Consensus 272 ~---------~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~ 323 (430)
T 3ri6_A 272 R---------KEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVK 323 (430)
T ss_dssp H---------HTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCE
T ss_pred H---------HHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 0 000001122235566777666 567788899999999999999999998876
No 150
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.82 E-value=1.2e-18 Score=177.98 Aligned_cols=321 Identities=12% Similarity=0.027 Sum_probs=200.7
Q ss_pred HHHHHHHHh-hcCC-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC--cEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 107 GFLGEMLSS-GFNV-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG--GGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 107 ~~~~~~l~~-~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~--~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
..+.+.+.. .+.. ....|...++..++.+++.+|+....+.+.+ .. ..++|+||++++..++...... .
T Consensus 47 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-----~~~~~i~~t~g~~~a~~~~~~~~~~~--~ 119 (397)
T 3fsl_A 47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK-----QQRVATIQTLGGSGALKVGADFLKRY--F 119 (397)
T ss_dssp HHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-----TTCEEEEEESHHHHHHHHHHHHHHHH--C
T ss_pred HHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc-----ccceEEEEcCCcHHHHHHHHHHHHhc--C
Confidence 334444444 4443 2345555566788888888888765542111 12 4689999999998775433211 1
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..|+++..+|.++...++..|. +++.+|...++++.+|+++|++++++. .....+|+.+.++|+|
T Consensus 120 -------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~npt 186 (397)
T 3fsl_A 120 -------PESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFNDLLATLKTL---QAGSIVLLHPCCHNPT 186 (397)
T ss_dssp -------TTCCEEEESSCCHHHHHHHHHTTC---CEEEECCEETTTTEECHHHHHHHHTTC---CTTCEEEECSSSCTTT
T ss_pred -------CCCeEEEeCCCchhHHHHHHHcCC---ceEEEeeeeccCCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCCC
Confidence 455678888999999999999999 999999843335799999999999742 1234578888999999
Q ss_pred Ccc---cChhHHHHHHHHhCCEEEeecccccccccC-ccchhh--hcCCCCCCeeEEcCccccCC-CCcceEEEE--eCc
Q 048643 263 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIC-PEFQHF--IDGVEGADSFSLNAHKWFFT-TLDCCCLWV--KDP 333 (506)
Q Consensus 263 G~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~-~~~~~~--~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~ 333 (506)
|.+ +++++|+++|++||+++++|++|+.+..-. ...... +.+...-..+..+++|.++. ...+|++++ .++
T Consensus 187 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~ 266 (397)
T 3fsl_A 187 GADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDA 266 (397)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred CcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCH
Confidence 999 567799999999999999999997665321 011111 11122344566778999984 456888875 343
Q ss_pred hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHHHHHHHHHHHHH
Q 048643 334 SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRSHVNMAKLFERL 405 (506)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~~~~~a~~l~~~ 405 (506)
..+.........+.... ... ...+....+...+. .+.++++.++..++++++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~--------------~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (397)
T 3fsl_A 267 EAAGRVLGQLKATVRRN--------------YSS---PPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKV 329 (397)
T ss_dssp HHHHHHHHHHHHHHHTT--------------TSS---CCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--------------cCC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322111100000000 000 01122222222221 456778888899999999999
Q ss_pred HHcCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCC
Q 048643 406 VASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGAT 477 (506)
Q Consensus 406 l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 477 (506)
|++.+ +++ | +.+.|.-. . .+.+.+.+.+.|+ ++.+. + |+++..
T Consensus 330 L~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~l~~~gi-~v~~g---~----Ris~~~- 380 (397)
T 3fsl_A 330 LSTEMPERNFDYLLNQRGMFSYTGL-S-------------------AAQVDRLREEFGV-YLIAS---G----RMCVAG- 380 (397)
T ss_dssp HHHHCTTSCCTHHHHCCSSEEECCC-C-------------------HHHHHHHHHTTCE-ECCTT---C----EEEGGG-
T ss_pred HHhcCCCCCceeecCCceEEEecCC-C-------------------HHHHHHHHHhCCE-EECCC---C----eEEEEe-
Confidence 98875 566 4 44443211 1 1234555666676 44443 1 998853
Q ss_pred CCCHHHHHHHHHHHHHH
Q 048643 478 LTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~ 494 (506)
. ++++|+++++.|+++
T Consensus 381 ~-~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 381 L-NTANVQRVAKAFAAV 396 (397)
T ss_dssp C-CTTTHHHHHHHHHHH
T ss_pred c-CHhhHHHHHHHHHhh
Confidence 2 445799999999865
No 151
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.81 E-value=3.6e-18 Score=176.56 Aligned_cols=319 Identities=13% Similarity=0.111 Sum_probs=202.3
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCcc-cc-CCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSF-LF-SGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~-~~-~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
|....+..++.+.+.+|+++.+|.+... .. .+....++|+|+++++..++.+..+ ++..|++...+|
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y 142 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-----------PGDNVLLDEPAY 142 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-----------CCCEEEEeCCCc
Confidence 3344455788999999999999986410 00 0002689999999998877776533 556788889999
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH------hcCCccEEEEE-eccCCCCCcccChh---HH
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV------EAGLVPLFLCA-TIGTTAITAVDPLK---PL 271 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~------~~g~~p~~Vv~-t~gtt~tG~idpl~---~I 271 (506)
..+...++..|. +++.+|+++ + .+|+++|++++++.. ..+..+.+|++ ..++|+||.+-|.+ +|
T Consensus 143 ~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l 216 (425)
T 2r2n_A 143 SGTLQSLHPLGC---NIINVASDE--S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI 216 (425)
T ss_dssp HHHHHHHGGGTC---EEEEECEET--T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHcCC---EEEEeCcCC--C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence 999999999999 999999874 2 599999999986311 00122445544 67899999997755 99
Q ss_pred HHHHHHhCCEEEeecccccccccCc---cchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccC
Q 048643 272 CDVAKQFGIWVHVDAAYAGSACICP---EFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLK 348 (506)
Q Consensus 272 ~~ia~~~g~~lhVDaA~gg~~~~~~---~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 348 (506)
+++|++||+++++|++|+.+..... ..... . ....+.+..+++|+++....+|++++++. +...+.....+..
T Consensus 217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~-~-~~~~~i~~~s~SK~~~~GlRiG~~~~~~~--l~~~l~~~~~~~~ 292 (425)
T 2r2n_A 217 YELARKYDFLIIEDDPYYFLQFNKFRVPTFLSM-D-VDGRVIRADSFSKIISSGLRIGFLTGPKP--LIERVILHIQVST 292 (425)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGG-C-TTSCEEEEEESTTTTCSTTCCEEEEEEHH--HHHHHHHHHHTTT
T ss_pred HHHHHHcCCEEEEECCcccccCCCCCCCCcccc-C-CCCCEEEEccchhhccCccceEEEecCHH--HHHHHHHHHHHhc
Confidence 9999999999999999986433211 11111 1 11234667789999984355899888643 2222211000000
Q ss_pred CccccCCCccCCCCccccCCCCCCchHHHHHHHHhch----hHHHHHHHHHHHHHHHHHHHHHc-CCCC-c---c---ce
Q 048643 349 NKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV----ANLRHFLRSHVNMAKLFERLVAS-DKRV-S---P---SA 416 (506)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~----~g~~~~i~~~~~~a~~l~~~l~~-~~~~-~---p---~~ 416 (506)
+ +.-.+....+..+|+.++. +.++++.++..++++++.+.|++ .|++ . | ..
T Consensus 293 --------------~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~ 355 (425)
T 2r2n_A 293 --------------L---HPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMF 355 (425)
T ss_dssp --------------C---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSE
T ss_pred --------------C---CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEE
Confidence 0 0000111222333443332 34566667777888899999987 5665 2 4 45
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-----CEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-----GIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+.+++.... + ..+.+.+.+.+.|+.+..+..+. +..++|++++. .++++|+++++.|
T Consensus 356 ~~~~~~~~~---------------~-~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~--~~~~~i~~~~~~l 417 (425)
T 2r2n_A 356 LWIKVKGIN---------------D-VKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS--ASPEQMDVAFQVL 417 (425)
T ss_dssp EEEEETTCS---------------C-CHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS--CCHHHHHHHHHHH
T ss_pred EEEEeCCCC---------------C-HHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC--CCHHHHHHHHHHH
Confidence 556664320 0 01224556667776544333221 34789999853 4888999999999
Q ss_pred HHHHHHH
Q 048643 492 QEQLEAF 498 (506)
Q Consensus 492 ~~~~~~l 498 (506)
.++.+++
T Consensus 418 ~~~l~~~ 424 (425)
T 2r2n_A 418 AQLIKES 424 (425)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9887653
No 152
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.81 E-value=2.3e-18 Score=173.44 Aligned_cols=294 Identities=11% Similarity=0.035 Sum_probs=182.0
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
|...+...++ .+++++++|.+. .++++||++|+..++.++...- ++.+|+++...|++
T Consensus 44 ~~~~~~~~~l----~~~la~~~~~~~---------~i~~~~g~~a~~~a~~~~~~~g---------~~~vvi~~~~~~~~ 101 (359)
T 3pj0_A 44 YGNGAVIEDF----ETKIAKILGKQS---------AVFFPSGTMAQQIALRIWADRK---------ENRRVAYHPLSHLE 101 (359)
T ss_dssp TTBSHHHHHH----HHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHHHHH---------TCCEEEECTTCHHH
T ss_pred ccCCHHHHHH----HHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHHhcC---------CCcEEEEeccceee
Confidence 4444544444 467788888753 3677889999998888776541 33367778788877
Q ss_pred HHHH---HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC-CcccChhH---HHHHHH
Q 048643 204 LQKA---AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TAVDPLKP---LCDVAK 276 (506)
Q Consensus 204 ~~ka---~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~idpl~~---I~~ia~ 276 (506)
.... +...|. +++.+|.+ ++.+|+++|+++ .+ .+.+|+++.+++++ |.+.|.++ |+++|+
T Consensus 102 ~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~ 168 (359)
T 3pj0_A 102 IHEQDGLKELQQI---TPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCH 168 (359)
T ss_dssp HSSTTHHHHHHCC---EEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred ehhcchHHHhcCc---eEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence 6542 255688 88888863 569999999987 22 24477777777776 78866555 499999
Q ss_pred HhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccC
Q 048643 277 QFGIWVHVDAAYAGSACI--CPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATES 354 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~--~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 354 (506)
+||+|+|+|++|..+... ........ ..+|.++.++||+++.|.+ |+ ++.+++... .+..........
T Consensus 169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~-~~~~~~l~~-~~~~~~~~~~~~---- 238 (359)
T 3pj0_A 169 EQGISLHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AI-LAGNDDFVQ-EAKIWKRRYGGD---- 238 (359)
T ss_dssp HHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EE-EEECHHHHH-HHHHHHHHTTCC----
T ss_pred HcCCEEEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EE-EECCHHHHH-HHHHHHHHhCCC----
Confidence 999999999998544321 11112222 3689999999999998855 44 445554432 221100000000
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc----c---ceEEEeecCCCcc
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS----P---SAVMDKLKPKYEN 427 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----p---~~v~f~~~~~~~~ 427 (506)
. .+....+.....++... .+.+++..++++++.+.|+++|+++ | +.+.+++....
T Consensus 239 -----~------~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-- 300 (359)
T 3pj0_A 239 -----L------ISLYPYILSADYYFEKR-----IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA-- 300 (359)
T ss_dssp -----C------SCCHHHHHHHHHHHHHH-----GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH--
T ss_pred -----c------chhHHHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc--
Confidence 0 00000111122233221 2455667888999999999988876 3 66777765431
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeee--eECCEEEEEEEecCCC--CCHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHA--VCGGIYAMRFAVGATL--TEERHVMVAWTMVQE 493 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lR~~~~~~~--tt~edi~~li~~l~~ 493 (506)
......+.+.+.++|+.+..+. ...+..++|+++.... .+.+++++.++.|.+
T Consensus 301 -------------~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 301 -------------DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp -------------HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred -------------chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 1224567777878887543322 2356789999986433 456677777766654
No 153
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.81 E-value=5e-18 Score=173.17 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=183.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...+++ +.+++++|.+ . . +++++|++|+..++.++.. ++..|+++...|.++.
T Consensus 50 ~~~~~~~l~----~~la~~~~~~-~-------~-i~~~sGt~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~ 105 (386)
T 1cs1_A 50 GNPTRDVVQ----RALAELEGGA-G-------A-VLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY 105 (386)
T ss_dssp CCHHHHHHH----HHHHHHHTCS-E-------E-EEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred CCccHHHHH----HHHHHHhCCC-c-------E-EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcHhHH
Confidence 344445555 5566666765 2 3 4456669999888776532 4567788889998765
Q ss_pred HHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCE
Q 048643 206 KAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 281 (506)
Q Consensus 206 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~ 281 (506)
... +..|+ +++.+|.+ |+++|+++++++ +.+|+++.+++++|.+.|+++|+++|++||++
T Consensus 106 ~~~~~~~~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~ 169 (386)
T 1cs1_A 106 RLFDSLAKRGCY---RVLFVDQG-------DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAV 169 (386)
T ss_dssp HHHHHHHTTTSC---EEEEECTT-------CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCC---EEEEeCCC-------CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCE
Confidence 543 55677 78888753 899999999753 34788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcc--eEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 282 VHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDC--CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 282 lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+|+|++|+++....+. . .++|.++.++||+++.|.+. |+++++++.... .+.. +...
T Consensus 170 li~De~~~~~~~~~~~-~------~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~-~l~~---~~~~---------- 228 (386)
T 1cs1_A 170 SVVDNTFLSPALQNPL-A------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAW---WANN---------- 228 (386)
T ss_dssp EEEECTTTCTTTCCGG-G------GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHH---HHHH----------
T ss_pred EEEECCCcccccCCcc-c------cCceEEEEcCcccccCCCCceeEEEEeCcHHHHH-HHHH---HHHh----------
Confidence 9999999877653221 1 16899999999999988764 888887643322 2211 0000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----------------------cce
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----------------------PSA 416 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----------------------p~~ 416 (506)
.+-....+..|..++.+ +.+.+..++..++++++.+.|++++.+. .++
T Consensus 229 -------~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (386)
T 1cs1_A 229 -------IGVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAM 299 (386)
T ss_dssp -------HTCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE
T ss_pred -------cCCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceE
Confidence 00011233445544433 4456667777788888888887754321 056
Q ss_pred EEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC---------------------------CEEE
Q 048643 417 VMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG---------------------------GIYA 469 (506)
Q Consensus 417 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------------------g~~~ 469 (506)
++|.+.+. ...+.+.+.+.|++ +....+. ...+
T Consensus 300 ~~~~~~~~-------------------~~~~~~~l~~~gi~-~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~ 359 (386)
T 1cs1_A 300 LSFELDGD-------------------EQTLRRFLGGLSLF-TLAESLGGVESLISHAATMTHAGMAPEARAAAGISETL 359 (386)
T ss_dssp EEEEESSC-------------------HHHHHHHHHTCSSS-EEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTE
T ss_pred EEEEECCC-------------------HHHHHHHHHhCCcc-eEcccCCCcceeeecccccccccCCHHHHHhcCCCCCe
Confidence 77776431 23455566667764 3321000 1368
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 470 MRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 470 lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+|+++. ..+++++|+.+.++|+++
T Consensus 360 iRis~~-~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 360 LRISTG-IEDGEDLIADLENGFRAA 383 (386)
T ss_dssp EEEECC-SSCHHHHHHHHHHHHHHH
T ss_pred EEEEEc-cCCHHHHHHHHHHHHHHh
Confidence 999995 467777888888888765
No 154
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.81 E-value=1.7e-18 Score=172.71 Aligned_cols=271 Identities=11% Similarity=0.077 Sum_probs=177.0
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH----HHhC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA----QIVG 212 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~----~~~G 212 (506)
+.+.+++++|.+ ..+++++|++|+..++.+... ++..|+++...|.+....+ +..|
T Consensus 3 l~~~la~~~g~~---------~~i~~~sG~~a~~~~~~~~~~-----------~g~~v~~~~~~~~~~~~~~~~~~~~~g 62 (331)
T 1pff_A 3 LEGKIAKLEHAE---------ACAATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQLRKFG 62 (331)
T ss_dssp HHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHhCCC---------eEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCCcchHHHHHHHHHHhcC
Confidence 446788888876 245666669998877765522 4567888889999887765 4578
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH-hCCEEEeecccccc
Q 048643 213 IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGS 291 (506)
Q Consensus 213 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~-~g~~lhVDaA~gg~ 291 (506)
+ +++.+|. +|+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++ +|+++++|++|+.+
T Consensus 63 ~---~~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~ 126 (331)
T 1pff_A 63 V---EVDFIDM-------AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASP 126 (331)
T ss_dssp C---EEEEECT-------TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHH
T ss_pred C---EEEEeCC-------CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCccc
Confidence 8 8888874 4778888888643 4578889999999999999999999999 99999999999866
Q ss_pred cccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccc-cCCccccCCCccCCCCccccCC
Q 048643 292 ACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEY-LKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 292 ~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~s 368 (506)
....+. . .++|.++.++||+++.|.+ +|+++++++... +.+.....+ . +
T Consensus 127 ~~~~~~-~------~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~-~~l~~~~~~~~--------------------~ 178 (331)
T 1pff_A 127 ILTNPL-D------LGVDIVVHSATKYINGHTDVVAGLVCSRADIIA-KVKSQGIKDIT--------------------G 178 (331)
T ss_dssp HHCCGG-G------GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHH-HHHHTCCCCCC--------------------C
T ss_pred ccCChh-h------cCCcEEEEECccccCCCCCceEEEEEeCcHHHH-HHHHHHHHhhc--------------------C
Confidence 543321 1 1689999999999998877 788877653333 223211111 0 0
Q ss_pred CCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC--------------CCCc---c------ceEEEeecCCC
Q 048643 369 RRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD--------------KRVS---P------SAVMDKLKPKY 425 (506)
Q Consensus 369 r~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~--------------~~~~---p------~~v~f~~~~~~ 425 (506)
.....+..|..++.+ +.+..+.++..++++.+.+.+++. |+++ + ++++|++. .
T Consensus 179 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~- 254 (331)
T 1pff_A 179 AIISPHDAWLITRGT--LTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD-G- 254 (331)
T ss_dssp CCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS-S-
T ss_pred CCCCHHHHHHHHcCc--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-C-
Confidence 011223444443332 233444455555566666655443 2332 1 46777764 2
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeee------------------------eECC--EEEEEEEecCCCC
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHA------------------------VCGG--IYAMRFAVGATLT 479 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------------------------~~~g--~~~lR~~~~~~~t 479 (506)
...+.+.+.+.|+...... ...| ..++|+++. ..+
T Consensus 255 ------------------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~~ 315 (331)
T 1pff_A 255 ------------------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVG-CEN 315 (331)
T ss_dssp ------------------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECC-SSC
T ss_pred ------------------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEe-cCC
Confidence 1345556666776321110 0011 368999995 567
Q ss_pred CHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQ 494 (506)
Q Consensus 480 t~edi~~li~~l~~~ 494 (506)
++++|+.++++|+++
T Consensus 316 t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 316 VQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHh
Confidence 888999999998753
No 155
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.81 E-value=2.9e-18 Score=179.29 Aligned_cols=348 Identities=13% Similarity=0.079 Sum_probs=192.5
Q ss_pred CccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHH
Q 048643 94 NYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTL 173 (506)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al 173 (506)
.|+.|..+.+. + .+.+.+...+......|...+...++++ ++++++|.+ .+++|+|||+||..++
T Consensus 42 ~ylD~~~~~~~-~-~v~~a~~~~l~~~~~~y~~~~~~~~l~~----~la~~~~~~---------~v~~t~~gt~A~~~al 106 (467)
T 2oqx_A 42 VFIDLLTDSGT-G-AVTQSMQAAMMRGDEAYSGSRSYYALAE----SVKNIFGYQ---------YTIPTHQGRGAEQIYI 106 (467)
T ss_dssp CSEECSCCSSC-S-CCCHHHHHHTTSCCCCSSSCHHHHHHHH----HHHHHHCCS---------EEEEEC--CCSHHHHH
T ss_pred eeEecccCCCc-H-HHHHHHHHHhccCcceeccCchhHHHHH----HHHHHhCcC---------cEEEcCCcHHHHHHHH
Confidence 46666544333 2 2233344444433335656666666654 566666653 6799999999999999
Q ss_pred HHHHHHHHHhhcccCCCC-eEEEeCCCCchHHH-HHHHHhCCCCCCeEEE------ecCC--CCCcccCHHHHHHHHHHH
Q 048643 174 TAARDRVLNKIGRENISK-LVVYGSDQTHCALQ-KAAQIVGIDLKNFRAI------KTTK--SSSYGLSPDSLLTQINLD 243 (506)
Q Consensus 174 ~~ar~~~~~~~~~~~~~~-~~v~~s~~~H~s~~-ka~~~~G~g~~~v~~v------~~~~--~~~~~~d~~~L~~~i~~~ 243 (506)
.+++.......| .++ ..|+++ ..|+... ......|. .++.. +.+. ..++.+|+++|+++|++.
T Consensus 107 ~~~~~~~~~~~G---~~~~d~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~ 179 (467)
T 2oqx_A 107 PVLIKKREQEKG---LDRSKMVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_dssp HHHHHHHHHHHC---CCTTTCEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHH
T ss_pred HHHhccccccCC---CCccceEEec-ccccccchhhhhccCc---ceeeccccccccCCCCCCccCCcCHHHHHHHHHhc
Confidence 988764111111 011 235555 5785433 33344454 44332 2210 024689999999999863
Q ss_pred HhcCCccEEEEEeccCCCC-Ccc---cChhHHHHHHHHhCCEEEeeccccc-ccc--------cCc-cchhhh-cCCCCC
Q 048643 244 VEAGLVPLFLCATIGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SAC--------ICP-EFQHFI-DGVEGA 308 (506)
Q Consensus 244 ~~~g~~p~~Vv~t~gtt~t-G~i---dpl~~I~~ia~~~g~~lhVDaA~gg-~~~--------~~~-~~~~~~-~gi~~a 308 (506)
. ...+.+|+++.+++++ |.+ +++++|+++|++||+|+|+|++++. ... ... ...... ...+.+
T Consensus 180 ~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 257 (467)
T 2oqx_A 180 G--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA 257 (467)
T ss_dssp C--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC
T ss_pred C--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC
Confidence 1 0124467888888887 665 5689999999999999999987754 221 111 111111 001357
Q ss_pred CeeEEcCccccCCCCcceEEEEeCc---hhHHhhhcCCcccc--CCccccCCCccCCCCccccCCCCCCchHHHHHHHHh
Q 048643 309 DSFSLNAHKWFFTTLDCCCLWVKDP---SALVSSLSTNPEYL--KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY 383 (506)
Q Consensus 309 Dsi~~~~hK~l~~p~~~g~~~~r~~---~~l~~~~~~~~~yl--~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~ 383 (506)
|++++++||+++.|.| |+++.++. +.+. .+. .+. ... .. +.+. ..+.. ..++...
T Consensus 258 d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~-~~~---~~~~~~~~---------~~----~~~~-~~~~~-~~al~~~ 317 (467)
T 2oqx_A 258 DMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYT-ECR---TLCVVQEG---------FP----TYGG-LEGGA-MERLAVG 317 (467)
T ss_dssp SEEEEESSSTTCCSSC-EEEEECSGGGHHHHH-HHH---HHHHHTTS---------SC----CCCC-CCHHH-HHHHHHH
T ss_pred CeEEEecccccCCCCc-eEEEecChhHHHHHH-HHH---HhhhccCC---------cc----cccc-hhhhH-HHHHHHh
Confidence 8899999999998854 56666554 2221 111 111 000 00 0000 01111 1122210
Q ss_pred chhHH-HHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecC--CCcccccccccchHHHHHHH-HHHHHHHH-Hh
Q 048643 384 GVANL-RHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKP--KYENCHSQQLVTEEEAINEF-NRELLESI-NA 453 (506)
Q Consensus 384 G~~g~-~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~--~~~~~~~~~~~~~~~~~~~~-~~~l~~~l-~~ 453 (506)
-.+.+ .+.+++..++++++.+.|++. +++ | .++.+.+.. ... +. .++ ..++.+.| .+
T Consensus 318 l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~l~~~L~~~ 384 (467)
T 2oqx_A 318 LYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQQAGGHAAFVDAGKLLPHI---------PA---DQFPAQALACELYKV 384 (467)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEEEECSSCEEEEHHHHSTTS---------CG---GGCHHHHHHHHHHHH
T ss_pred hHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeeecCCceEEEEechhhcccC---------Cc---ccccHHHHHHHHHHh
Confidence 01122 235566678899999999887 665 3 555565531 100 00 111 45667777 67
Q ss_pred cCcEEEeeeeE-------------CCEEEEEEEecCCC-CCHHHHHHHHHHHHHHHHHHH
Q 048643 454 SGKAYMTHAVC-------------GGIYAMRFAVGATL-TEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 454 ~g~~~~~~~~~-------------~g~~~lR~~~~~~~-tt~edi~~li~~l~~~~~~l~ 499 (506)
.|+........ .+..++|+++. .. +++++|+++++.|+++.+++.
T Consensus 385 ~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 385 AGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIP-RATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp HCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCC-TTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cCceecccccccccccccccccccCccCeEEEEec-CCCCCHHHHHHHHHHHHHHHhhhh
Confidence 78644332210 12368999984 44 788899999999999887654
No 156
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.80 E-value=1.3e-18 Score=179.61 Aligned_cols=322 Identities=13% Similarity=0.025 Sum_probs=201.7
Q ss_pred HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCC--cEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 107 GFLGEMLSSGFNV-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG--GGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 107 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~--~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
..+.+.+...+.. ....|....+..++.+.+.+|+....+.+.+ .. ..++|+||++|+..++...... .
T Consensus 70 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~~~i~~t~G~t~al~~~~~~~~~~--~- 141 (420)
T 4f4e_A 70 RAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIA-----AGRVVTAQALGGTGALKIGADFLRTL--N- 141 (420)
T ss_dssp HHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-----TTCEEEEEEEHHHHHHHHHHHHHHHH--C-
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccc-----cCceEEEECCccHHHHHHHHHHHHHh--C-
Confidence 3344444444443 2345655566788988888888765542111 12 5799999999998775432211 1
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..|+++..+|.++...++..|. +++.+|+..++++.+|++.|++++++. .....+|+.+.++|+||
T Consensus 142 ------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG 209 (420)
T 4f4e_A 142 ------PKAKVAISDPSWENHRALFDMAGF---EVVAYPYYDAKTNGVNFDGMLAALNGY---EPGTIVVLHACCHNPTG 209 (420)
T ss_dssp ------TTCCEEEEESCCHHHHHHHHHTTC---CEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTC
T ss_pred ------CCCEEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCC
Confidence 556688888999999999999999 999999832235799999999999742 12345788889999999
Q ss_pred cc---cChhHHHHHHHHhCCEEEeecccccccccCc-cchh--hhcCCCCCCeeEEcCccccCC-CCcceEEEE--eCch
Q 048643 264 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFQH--FIDGVEGADSFSLNAHKWFFT-TLDCCCLWV--KDPS 334 (506)
Q Consensus 264 ~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~-~~~~--~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~~ 334 (506)
.+ +++++|+++|++||+++++|.+|+++..-.+ .... .+.+...-+.+..+++|.++. ...+|++++ .++.
T Consensus 210 ~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~ 289 (420)
T 4f4e_A 210 VDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKD 289 (420)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHH
T ss_pred CCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHH
Confidence 98 5578999999999999999999977654211 1111 111223445677789999984 466888764 3333
Q ss_pred hHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHHHHHHHHHHHHHH
Q 048643 335 ALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRSHVNMAKLFERLV 406 (506)
Q Consensus 335 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~~~~~a~~l~~~l 406 (506)
...........+... +..+ ...+..+++...+. .+.++++.++..++++++.+.|
T Consensus 290 ~~~~~~~~~~~~~~~--------------~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 352 (420)
T 4f4e_A 290 EAARVLSQLKRVIRT--------------NYSN---PPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERL 352 (420)
T ss_dssp HHHHHHHHHHHHHHT--------------TTSS---CCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--------------ccCC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221111100000000 0000 01222222222221 3456788888999999999999
Q ss_pred HcC---CCCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCC
Q 048643 407 ASD---KRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATL 478 (506)
Q Consensus 407 ~~~---~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 478 (506)
++. ++++ | +++.|.-.+ .+.+.+.+.+.|+ ++.+. .|+++..
T Consensus 353 ~~~~~~~~~~~~~~~~g~~~~~~~~--------------------~~~~~~~l~~~gI-~v~~~-------~Ris~~~-- 402 (420)
T 4f4e_A 353 KAAGIERDFSFINAQRGMFSYSGLT--------------------SAQVDRLREEFGI-YAVST-------GRICVAA-- 402 (420)
T ss_dssp HHTTCSSCCTHHHHSCSSEEECCCC--------------------HHHHHHHHHHHCE-ECCTT-------SEEEGGG--
T ss_pred HhcCCCCCceeECCCccEEEEeCCC--------------------HHHHHHHHHhCCE-EecCC-------CeEEEec--
Confidence 987 4676 4 555442111 1234445555676 44442 2999853
Q ss_pred CCHHHHHHHHHHHHHHH
Q 048643 479 TEERHVMVAWTMVQEQL 495 (506)
Q Consensus 479 tt~edi~~li~~l~~~~ 495 (506)
.++++|++++++|+++.
T Consensus 403 ~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 403 LNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 24557999999998764
No 157
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.80 E-value=1.9e-18 Score=179.59 Aligned_cols=314 Identities=10% Similarity=0.082 Sum_probs=191.3
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCe----------
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL---------- 192 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~---------- 192 (506)
.|....+..++++++.+|+.+.+|++... ...++|+||++|+..++.+... ++.
T Consensus 78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~-----------~gd~~~~~~~~~~ 141 (444)
T 3if2_A 78 NYSNPQGDSAFIDALVGFFNRHYDWNLTS-----ENIALTNGSQNAFFYLFNLFGG-----------AFVNEHSQDKESK 141 (444)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHSSE-----------EEECC-------C
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecCcHHHHHHHHHHHhC-----------CCccccccccccc
Confidence 45555567899999999999988875432 3789999999999888776532 221
Q ss_pred ----EEEeC-CCCchHHHHHH------HHhCCCCCCeEEEecCCC-C--CcccCHHHHHHHHHHHHhcCCccEEEEEecc
Q 048643 193 ----VVYGS-DQTHCALQKAA------QIVGIDLKNFRAIKTTKS-S--SYGLSPDSLLTQINLDVEAGLVPLFLCATIG 258 (506)
Q Consensus 193 ----~v~~s-~~~H~s~~ka~------~~~G~g~~~v~~v~~~~~-~--~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g 258 (506)
.|+++ ..+|..+..++ ...|. .++.+|++.+ + ++.+|+++|+++++... ..+.+|+++.+
T Consensus 142 g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p 215 (444)
T 3if2_A 142 SVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP---HIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRP 215 (444)
T ss_dssp EEEEEEEESSSSCCGGGTTCCSSSCCEEECCC---EEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESS
T ss_pred cccceEEEeCCCCccchhhcccccchhhccCc---eEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCC
Confidence 35443 56666655432 22345 6777887641 1 25899999999865421 12457888889
Q ss_pred CCCCCcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh
Q 048643 259 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA 335 (506)
Q Consensus 259 tt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 335 (506)
+|++|.+-| +++|+++|++||+++|+|++|+.++... .+..........+.+..++||++....++|+++.+ +..
T Consensus 216 ~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~-~~l 293 (444)
T 3if2_A 216 TNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVAD-AKV 293 (444)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECC-HHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEEC-HHH
Confidence 999999988 8999999999999999999997532111 11111111235667888999986555778877653 322
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHH----HH-HHHHHHHHHHHHHHHHHc-C
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANL----RH-FLRSHVNMAKLFERLVAS-D 409 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~----~~-~i~~~~~~a~~l~~~l~~-~ 409 (506)
...+....... + .....+...++...+....+ .+ +.++..++.+++.+.|.+ +
T Consensus 294 -~~~~~~~~~~~----------------~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 352 (444)
T 3if2_A 294 -IEAVSAMNAVV----------------N----LAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQAL 352 (444)
T ss_dssp -HHHHHHHHHHH----------------H----SSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHhc----------------c----CCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22221100000 0 00122223333333222222 22 344455566677776654 4
Q ss_pred CC--Cc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--C--------CEEEEE
Q 048643 410 KR--VS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC--G--------GIYAMR 471 (506)
Q Consensus 410 ~~--~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~--------g~~~lR 471 (506)
++ +. | ..+.+.+..... ...++.+.|.+.|+.......+ . +..++|
T Consensus 353 ~~~~~~~~~~~~g~~~~~~~~~~~~----------------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iR 416 (444)
T 3if2_A 353 GDYPLMIHKPEGAIFLWLWFKDLPI----------------STLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIR 416 (444)
T ss_dssp SSSSEEEECCCBSSEEEEEETTCSS----------------CHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEE
T ss_pred ccCCceEecCCccEEEEEEcCCCCC----------------CHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEE
Confidence 43 33 3 445555543110 1245666777778643332222 1 125899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 472 FAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 472 ~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
+++.. ++++|+++++.|.++.+++..
T Consensus 417 is~~~---~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 417 MSIAA---DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp EESSS---CHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeC---CHHHHHHHHHHHHHHHHHHHc
Confidence 99953 888999999999999888764
No 158
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.80 E-value=8.6e-18 Score=174.87 Aligned_cols=300 Identities=11% Similarity=-0.007 Sum_probs=194.5
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 122 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 122 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
..|...+...++++.+.+|+. .|++... ...++++|+++++..+ .+... ++..|+++..+|
T Consensus 105 ~~y~~~~g~~~lr~~ia~~~~--~g~~~~~-----~~i~~t~G~~~al~~~-~~l~~-----------~gd~Vl~~~p~~ 165 (449)
T 3qgu_A 105 SGYGAEQGQGALREAVASTFY--GHAGRAA-----DEIFISDGSKCDIARI-QMMFG-----------SKPTVAVQDPSY 165 (449)
T ss_dssp CCSTTTTCCHHHHHHHHHHHH--TTTTCCG-----GGEEEESCHHHHHHHH-HHHHC-----------SSSCEEEEESCC
T ss_pred CCCCCCCCcHHHHHHHHHHHH--cCCCCCH-----HHEEEccCHHHHHHHH-HHHhC-----------CCCEEEEcCCCC
Confidence 345554567889999888887 5554321 2788999988877654 32221 556688889999
Q ss_pred hHHHHHHHHhCCCCCC----------eEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---h
Q 048643 202 CALQKAAQIVGIDLKN----------FRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---L 268 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~----------v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l 268 (506)
.++..+++..|. + ++.+|+++++++..|++.+ ..+.+|+++.++|++|.+-+ +
T Consensus 166 ~~~~~~~~~~g~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~l 231 (449)
T 3qgu_A 166 PVYVDTSVMMGM---TGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQL 231 (449)
T ss_dssp THHHHHHHHHTC---SCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHHH
T ss_pred hhHHHHHHHcCC---cccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHHH
Confidence 999999999998 7 9999997644455554321 12346777789999999854 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchh--hhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhH------Hhh
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQH--FIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSAL------VSS 339 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~--~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l------~~~ 339 (506)
++|+++|++||+++++|++|+++..-...... .+.+....+.+..+++|+++ ....+|+++.++...- ...
T Consensus 232 ~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~ 311 (449)
T 3qgu_A 232 TELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHAD 311 (449)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHH
T ss_pred HHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHH
Confidence 89999999999999999999875432111101 11111245677889999997 5577899887653210 000
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS--- 413 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--- 413 (506)
+.....+ + .-....+...++...+ +.+.++++.++..++++++.+.|++. +++
T Consensus 312 ~~~~~~~-----------------~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 370 (449)
T 3qgu_A 312 WNRVMTT-----------------C---FNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYG 370 (449)
T ss_dssp HHHHHHH-----------------S---CCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred HHHHhhc-----------------c---cCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeC
Confidence 0000000 0 0011233444444444 33567888899999999999999987 776
Q ss_pred c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeE---CCEEEEEEEecCCCCCHHHHHH
Q 048643 414 P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAVC---GGIYAMRFAVGATLTEERHVMV 486 (506)
Q Consensus 414 p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~---~g~~~lR~~~~~~~tt~edi~~ 486 (506)
| ..+.+.+... ...++.+.|.++ |+ ++.+... .+..++|+++.. ++++|++
T Consensus 371 ~~~~~~~~~~~~~~------------------~~~~~~~~l~~~~gI-~v~pg~~f~~~~~~~iRis~~~---~~e~i~~ 428 (449)
T 3qgu_A 371 GDDAPYIWVGFPGK------------------PSWDVFAEILERCNI-VTTPGSGYGPAGEGFVRASAFG---SRENILE 428 (449)
T ss_dssp SSSSSEEEEECTTS------------------CHHHHHHHHHHHHCE-ECEEGGGGCGGGTTEEEEECCS---CHHHHHH
T ss_pred CCCeeEEEEECCCC------------------CHHHHHHHHHHHCCE-EEecchHhCCCCCCeEEEEecC---CHHHHHH
Confidence 3 4555555311 024555666655 76 4444322 235789999743 7889999
Q ss_pred HHHHHHHHHHH
Q 048643 487 AWTMVQEQLEA 497 (506)
Q Consensus 487 li~~l~~~~~~ 497 (506)
+++.|+++.++
T Consensus 429 ~l~~l~~~~~~ 439 (449)
T 3qgu_A 429 AVRRFKEAYGK 439 (449)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHHh
Confidence 99999887543
No 159
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.68 E-value=3.2e-21 Score=197.28 Aligned_cols=325 Identities=10% Similarity=0.035 Sum_probs=207.3
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC
Q 048643 109 LGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 188 (506)
Q Consensus 109 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~ 188 (506)
+.+.+...+......|... ..++++++.+|+++.+|.+.+. ...++|+||++++..++.++..
T Consensus 49 v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~---------- 111 (392)
T 3b1d_A 49 VKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK-----EDIVFVEGVVPAISIAIQAFTK---------- 111 (392)
Confidence 3444444443323334322 6789999999999988854321 2678999999999888777643
Q ss_pred CCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 189 ISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTK-SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 189 ~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
++..|++...+|.++..+++.+|. +++.+|.++ ++++.+|+++|++++++.. +.+|+++.++|++|.+-|
T Consensus 112 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~ 182 (392)
T 3b1d_A 112 -EGEAVLINSPVYPPFARSVRLNNR---KLVSNSLKEENGLFQIDFEQLENDIVEND-----VKLYLLCNPHNPGGRVWE 182 (392)
Confidence 445678888999999999999998 899999853 2346799999999987321 235667888999999854
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhh---cCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhh
Q 048643 268 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFI---DGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSL 340 (506)
Q Consensus 268 ---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~---~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~ 340 (506)
+++|+++|++||+++++|++|+++........... ......+.+..+++|+++ ..+.+|+++++++... +.+
T Consensus 183 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~~~ 261 (392)
T 3b1d_A 183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLC-AQF 261 (392)
Confidence 99999999999999999999987653211111111 000133466778999997 5567888887655332 222
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc-CCCCc---c--
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS-DKRVS---P-- 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~---p-- 414 (506)
....... ++..........+..+|+. +.+.++++.++..++++++.+.|++ .|+++ |
T Consensus 262 ~~~~~~~----------------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 324 (392)
T 3b1d_A 262 KHQQLVN----------------NHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQG 324 (392)
Confidence 1110000 0000001111112223332 3456777888888899999999987 67776 3
Q ss_pred ceEE-EeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 SAVM-DKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVC--GGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 ~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
+.+. +++... .....++.+.|. +.|+.+.....+ .+..++|++++. ++++|+++++.
T Consensus 325 ~~~~~i~~~~~----------------~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~e~i~~~l~~ 385 (392)
T 3b1d_A 325 TYLIWLDFSDY----------------GLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA---PKSLVEEICKR 385 (392)
Confidence 4443 444221 011345666675 567644333222 246789999854 46799999998
Q ss_pred HHHHHH
Q 048643 491 VQEQLE 496 (506)
Q Consensus 491 l~~~~~ 496 (506)
|+++.+
T Consensus 386 l~~~l~ 391 (392)
T 3b1d_A 386 IVCCLP 391 (392)
Confidence 887653
No 160
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.80 E-value=5.8e-18 Score=174.92 Aligned_cols=239 Identities=15% Similarity=0.145 Sum_probs=156.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++| +.+++++|.+ ..+++++|++|+..++.++.. ++..|+++...|.+..
T Consensus 56 ~~~~~~~l~----~~la~~~g~~---------~~v~~~sGt~A~~~~l~~~~~-----------~gd~vi~~~~~~~~~~ 111 (421)
T 2ctz_A 56 MNPTVDVLE----KRLAALEGGK---------AALATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYGGTF 111 (421)
T ss_dssp BCHHHHHHH----HHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCHHHH
T ss_pred CChHHHHHH----HHHHHHhCCC---------ceEEecCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence 334444444 5577777765 236667779999888776522 5667889999999887
Q ss_pred HHH----HHhCCCCCCeEEE-ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 206 KAA----QIVGIDLKNFRAI-KTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 206 ka~----~~~G~g~~~v~~v-~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
..+ +..|+ +++.+ +.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|++||+
T Consensus 112 ~~~~~~~~~~g~---~~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~ 175 (421)
T 2ctz_A 112 NQFKVTLKRLGI---EVRFTSREE-------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGV 175 (421)
T ss_dssp HHHHTHHHHTTC---EEEECCTTC-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC---EEEEECCCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 765 67788 88888 642 799999988753 4478889999999999999999999999999
Q ss_pred EEEeeccc-ccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeC--chh----HHhhhcCCccccCCccc
Q 048643 281 WVHVDAAY-AGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKD--PSA----LVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 281 ~lhVDaA~-gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~--~~~----l~~~~~~~~~yl~~~~~ 352 (506)
++|+|++| +.+.. ..... .++|.++.++||+++.|.+ .|.+++++ ... +.........|-.....
T Consensus 176 ~livD~~~~~~g~~-~~~~~------~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~ 248 (421)
T 2ctz_A 176 ALIVDNTFGMGGYL-LRPLA------WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLT 248 (421)
T ss_dssp EEEEECGGGGGGTS-CCGGG------GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHH
T ss_pred EEEEECCccccccc-CCccc------cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhh
Confidence 99999999 65532 11111 1689999999999998764 66666652 221 11111111111100000
Q ss_pred cCCCccCCC-----CccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 353 ESKQVVDYK-----DWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 353 ~~~~~~~~~-----~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.......+. ......+....++..|+.++. .+.+..++++..++++++.+.|+++|+++
T Consensus 249 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 312 (421)
T 2ctz_A 249 EAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLG--METLSLRAERHVENTLHLAHWLLEQPQVA 312 (421)
T ss_dssp HHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred hhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcC--cchHHHHHHHHHHhHHHHHHHHHhCCCee
Confidence 000000000 000012223455666766654 45577778888899999999999987754
No 161
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.80 E-value=6.8e-18 Score=173.61 Aligned_cols=343 Identities=11% Similarity=-0.005 Sum_probs=205.3
Q ss_pred CCCCCCCCccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCch
Q 048643 87 VTHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 166 (506)
Q Consensus 87 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt 166 (506)
..+..+..+.+.-+....++ .+.+.+....+.....|...++..++.+++.+|+....+.... ...++|+||+
T Consensus 39 ~i~l~~g~~~~~~~~~~~~~-~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~------~~i~~t~g~~ 111 (413)
T 3t18_A 39 VINAALGTLLDDKGKIIALP-SVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGY------ISAIATPGGT 111 (413)
T ss_dssp CEECCSCCCBCTTSCBCCCH-HHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHH
T ss_pred eEeccccCccCCCCCcCChH-HHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcccc------CcEEEcCccH
Confidence 34444444444332323333 3445555433222334555556788999999999887654321 2689999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 048643 167 EAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA 246 (506)
Q Consensus 167 ~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 246 (506)
+|+..++.+..+ ++..|+++..+|.++..+++..|. +++.+|.+++ ++.+|+++|++++++....
T Consensus 112 ~al~~~~~~~~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~ 176 (413)
T 3t18_A 112 GAIRSAIFSYLD-----------EGDPLICHDYYWAPYRKICEEFGR---NFKTFEFFTD-DFAFNIDVYKEAIDEGIRD 176 (413)
T ss_dssp HHHHHHHHHHCC-----------SSCEEEEESSCCTHHHHHHHHHTC---EEEEECCBCT-TSSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-----------CCCEEEECCCCcccHHHHHHHhCC---eEEEeeccCC-CCCcCHHHHHHHHHHHhhc
Confidence 999887775533 566788888999999999999999 9999998543 4799999999999864211
Q ss_pred CCccEEEEEecc-CCCCCcccChhHHH---HHHH------HhCCEEEeecccccccccCccchhhhcCCC--CCC---ee
Q 048643 247 GLVPLFLCATIG-TTAITAVDPLKPLC---DVAK------QFGIWVHVDAAYAGSACICPEFQHFIDGVE--GAD---SF 311 (506)
Q Consensus 247 g~~p~~Vv~t~g-tt~tG~idpl~~I~---~ia~------~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~--~aD---si 311 (506)
+ ...+|+++.+ +|+||.+-|.+++. ++|+ +||+++++|++|+++............... .-| .+
T Consensus 177 ~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (413)
T 3t18_A 177 S-DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVV 255 (413)
T ss_dssp C-SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEE
T ss_pred C-CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEE
Confidence 1 1236777777 89999997765555 5555 899999999999765532221112111111 123 34
Q ss_pred EEcCccccCC-CCcceEEEEe--CchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch---
Q 048643 312 SLNAHKWFFT-TLDCCCLWVK--DPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV--- 385 (506)
Q Consensus 312 ~~~~hK~l~~-p~~~g~~~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~--- 385 (506)
..+++|.++. ...+|+++.. +++.. +.+.....+.... .......+...+....+..
T Consensus 256 ~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~ 318 (413)
T 3t18_A 256 AFSMSKSHTAYGLRSGAAVGISSSKEII-EEFEASLAHSARC----------------NWSNGTHAAQNILIELERAENK 318 (413)
T ss_dssp EEEHHHHTTCGGGCCEEEEEEESCHHHH-HHHHHHHHHHHHH----------------HTSSCCHHHHHHHHHTTSHHHH
T ss_pred EEecCccCCCcCcCcEEEEEecCCHHHH-HHHHHHHHHhhhc----------------cccCCChHHHHHHHHHhcChHH
Confidence 5589999984 4567888762 44332 2222111111000 0000122333444443322
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCc
Q 048643 386 ----ANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGK 456 (506)
Q Consensus 386 ----~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 456 (506)
+..+++.++..++.+++.+.|++. +++ | +++.|.-... ..++.+.|.+.|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~gv 378 (413)
T 3t18_A 319 KIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGFFTFIPTDK-------------------AFDIVKDLEKENI 378 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSSCEEEECSC-------------------HHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceEEEEeCCCC-------------------HHHHHHHHHhCCE
Confidence 234456677788888999999887 676 3 4333321111 2445566767776
Q ss_pred EEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 457 AYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 457 ~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
. +.+. ..++|+++... +++ ++ ++.|.++.+++.
T Consensus 379 ~-v~~g----~~~iRis~~~~-~~~-~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 379 F-TIPS----AKGIRVAICGV-GEE-KI---PKLVQRLAFYTN 411 (413)
T ss_dssp E-CEEC----SSEEEECTTTS-CGG-GH---HHHHHHHHHHHH
T ss_pred E-EecC----CCceEEEEeeC-CHH-HH---HHHHHHHHHHHh
Confidence 4 4442 46899998633 333 33 555555555443
No 162
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.80 E-value=1.7e-18 Score=178.02 Aligned_cols=321 Identities=12% Similarity=0.050 Sum_probs=203.0
Q ss_pred HHHHHHHHhhc-C-CCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE--cCCchHHHHHHHHHHHHHHHH
Q 048643 107 GFLGEMLSSGF-N-VVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI--QGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 107 ~~~~~~l~~~~-n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~--t~ggt~a~l~al~~ar~~~~~ 182 (506)
..+.+.+...+ + .....|...+...++++.+.+|+....|.+.. ....++ |+||++|+..++..++.. .
T Consensus 51 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-----~~~v~~~~t~gg~~a~~~~~~~~~~~--~ 123 (412)
T 1ajs_A 51 PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQ-----EKRVGGVQSLGGTGALRIGAEFLARW--Y 123 (412)
T ss_dssp HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-----TTCEEEEEEEHHHHHHHHHHHHHHHH--S
T ss_pred HHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccC-----CCcEEEEECCCcHHHHHHHHHHHHHh--C
Confidence 34455555444 1 12334555566788888888888655443211 126788 999999998876543321 1
Q ss_pred hhcccCCCC-----eEEEeCCCCchHHHHHHHHhCCCCCC-eEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 183 KIGRENISK-----LVVYGSDQTHCALQKAAQIVGIDLKN-FRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 183 ~~~~~~~~~-----~~v~~s~~~H~s~~ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
++ ..|+++..+|.++...++..|. + ++.+|.++++++.+|+++|++++++. +....+|+.+
T Consensus 124 -------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~ 190 (412)
T 1ajs_A 124 -------NGTNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVLHA 190 (412)
T ss_dssp -------SSSSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEES
T ss_pred -------cCcCCCCCeEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEEEC
Confidence 33 5677788899999999999999 9 99999853235789999999999752 1224567789
Q ss_pred ccCCCCCcc---cChhHHHHHHHHhCCEEEeecccccccccC---c--cchhhhcCCCCCCeeEEcCccccCC-CCcceE
Q 048643 257 IGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIC---P--EFQHFIDGVEGADSFSLNAHKWFFT-TLDCCC 327 (506)
Q Consensus 257 ~gtt~tG~i---dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~---~--~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~ 327 (506)
.++|+||.+ +++++|+++|++||+++++|++|.++..-. + ..... .....-+.+..++||.++. ...+|+
T Consensus 191 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~riG~ 269 (412)
T 1ajs_A 191 CAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF-VSEGFELFCAQSFSKNFGLYNERVGN 269 (412)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH-HHTTCCEEEEEECTTTSCCGGGCEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH-hccCCcEEEEEecccccCCCCcceEE
Confidence 999999998 457789999999999999999997654321 1 11111 1111122667889998876 455888
Q ss_pred EEEe--Cchh---HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHH
Q 048643 328 LWVK--DPSA---LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRS 394 (506)
Q Consensus 328 ~~~r--~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~ 394 (506)
+++. +++. +...+.. +... +..+ ...+..+++...+. .+.++++.++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~--------------~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 329 (412)
T 1ajs_A 270 LTVVAKEPDSILRVLSQMQK---IVRV--------------TWSN---PPAQGARIVARTLSDPELFHEWTGNVKTMADR 329 (412)
T ss_dssp EEEECSSHHHHHHHHHHHHH---HHHT--------------TTSS---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHH---HHhc--------------ccCC---CChHHHHHHHHHHcCcchhHHHHHHHHHHHHH
Confidence 8882 4432 1111110 0000 0000 12223333333332 2367788888
Q ss_pred HHHHHHHHHHHHHcCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECC
Q 048643 395 HVNMAKLFERLVASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGG 466 (506)
Q Consensus 395 ~~~~a~~l~~~l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g 466 (506)
..++++++.+.|++.+ +++ | +.+.|. .. + ...+...+.+.|+ ++.+
T Consensus 330 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~-----------~-------~~~~~~~l~~~gv-~v~~----- 383 (412)
T 1ajs_A 330 ILSMRSELRARLEALKTPGTWNHITDQIGMFSFT--GL-----------N-------PKQVEYLINQKHI-YLLP----- 383 (412)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEEC--CC-----------C-------HHHHHHHHHTTCE-ECCT-----
T ss_pred HHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEe--CC-----------C-------HHHHHHHHHhCCE-EecC-----
Confidence 9999999999999874 366 4 444442 11 0 1233444455675 4443
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 467 IYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 467 ~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.+|++++. .++++|+++++.|+++.+++
T Consensus 384 --~~Ris~~~--~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 384 --SGRINMCG--LTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp --TSEEEGGG--CCTTTHHHHHHHHHHHHHHC
T ss_pred --CcEEEeee--CCHHHHHHHHHHHHHHHHhc
Confidence 26999863 36779999999999887653
No 163
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.80 E-value=4.6e-18 Score=173.80 Aligned_cols=210 Identities=13% Similarity=0.123 Sum_probs=150.5
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH----HHH
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA----AQI 210 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka----~~~ 210 (506)
.++.+++++++|.+ ..+++++|++|+..++.++.. ++..|+++...|.+.... ++.
T Consensus 62 ~~l~~~la~~~g~~---------~~i~~~sG~~ai~~~~~~~~~-----------~gd~vl~~~~~y~~~~~~~~~~~~~ 121 (389)
T 3acz_A 62 EQFEEMVCSIEGAA---------GSAAFGSGMGAISSSTLAFLQ-----------KGDHLIAGDTLYGCTVSLFTHWLPR 121 (389)
T ss_dssp HHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHTTTCC-----------TTCEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHHH
Confidence 34446678888875 357777889998877765422 456788888999887666 577
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 290 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg 290 (506)
.|+ +++.+|. .|+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.
T Consensus 122 ~g~---~~~~v~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~ 185 (389)
T 3acz_A 122 FGI---EVDLIDT-------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTS 185 (389)
T ss_dssp TTC---EEEEECT-------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC
T ss_pred cCC---EEEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 888 8888875 3889999988653 34788899999999999999999999999999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCC
Q 048643 291 SACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 291 ~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
+....+ .. .++|.++.++||+++.|.+ +|++++++.+... .+.....+. +
T Consensus 186 ~~~~~~-~~------~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~-~l~~~~~~~--------------------g 237 (389)
T 3acz_A 186 PCFLKP-LE------LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIA-TIKFYRKDA--------------------G 237 (389)
T ss_dssp TTTCCG-GG------TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHHHHHHH--------------------C
T ss_pred ccccCc-cc------cCCeEEEECChhhccCCCCceeEEEEECcHHHHH-HHHHHHHhc--------------------C
Confidence 654222 11 1689999999999999877 6888887633322 221100000 0
Q ss_pred CCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 369 RRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 369 r~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
-....+..|..++.+ +.+..++++..++++.+.+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~ 277 (389)
T 3acz_A 238 SLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHE 277 (389)
T ss_dssp CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 011335567666654 4456667777888888888887764
No 164
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.80 E-value=2e-18 Score=179.72 Aligned_cols=301 Identities=12% Similarity=0.017 Sum_probs=185.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH-HHH
Q 048643 128 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA-LQK 206 (506)
Q Consensus 128 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s-~~k 206 (506)
+....+|...++++++++|.+.. .+++++||+||..++.+++. ++..|+++..+|.+ +..
T Consensus 87 ~~~~~~e~~a~~~la~~~g~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~Gd~Vl~~~~~~~~~~~~ 147 (447)
T 3h7f_A 87 EHVDVVENLARDRAKALFGAEFA--------NVQPHSGAQANAAVLHALMS-----------PGERLLGLDLANGGHLTH 147 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHcCCCce--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEecCcccccccch
Confidence 34446666555999999998743 34478889999888877654 55677778777755 211
Q ss_pred H--HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 207 A--AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 207 a--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
. ....|.+ -.++.++++++ ++.+|+++|++++++.. |.+|+++.+.++++. ++++|+++|++||+++|+
T Consensus 148 ~~~~~~~g~~-~~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~ 218 (447)
T 3h7f_A 148 GMRLNFSGKL-YENGFYGVDPA-THLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLV 218 (447)
T ss_dssp TCTTSHHHHS-SEEEEECCCTT-TCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEE
T ss_pred hhhhhhcCCe-eEEEEcCcCcc-cCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEE
Confidence 1 1122220 04556666543 57899999999997642 336666666666654 999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCc
Q 048643 285 DAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDW 363 (506)
Q Consensus 285 DaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~ 363 (506)
|++|+.++......... ++.+|.++.++||+++.|.+ |+++.++ ... +.+.. ..++..
T Consensus 219 Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~-~~l~~~~~~~~~--------------- 277 (447)
T 3h7f_A 219 DMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYA-KAINSAVFPGQQ--------------- 277 (447)
T ss_dssp ECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEEEECG-GGH-HHHHHHHTTTTC---------------
T ss_pred ECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEEEECH-HHH-HHHhhhcCCccc---------------
Confidence 99986544332221111 23689999999999987765 7776654 222 22211 001110
Q ss_pred cccCCCC-CCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c---ceEEEeecCCCcccccc
Q 048643 364 QITLSRR-FRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P---SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 364 ~~~~sr~-~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p---~~v~f~~~~~~~~~~~~ 431 (506)
.+.. .....+..++.....++++++.++..++++++.+.|.+. ++++ + +.+.+.+.+.+.
T Consensus 278 ---~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----- 349 (447)
T 3h7f_A 278 ---GGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL----- 349 (447)
T ss_dssp ---SSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC-----
T ss_pred ---CCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC-----
Confidence 0100 012333445555445578889999999999999999876 4665 1 455555543210
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEe----ee---eECCEEEEEEEecCC---CCCHHHHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMT----HA---VCGGIYAMRFAVGAT---LTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~----~~---~~~g~~~lR~~~~~~---~tt~edi~~li~~l~~~~~~ 497 (506)
+ ...+.+.+.+.|+. +. +. .......+|+++... ..++++|+++++.|.++.++
T Consensus 350 ----~-------~~~~~~~l~~~GI~-v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 350 ----D-------GQAAEDLLHEVGIT-VNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ----C-------HHHHHHHHHHTTEE-CBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ----C-------HHHHHHHHHHCCeE-EecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 0 12344445555764 33 11 122345799986321 25688999999999887654
No 165
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.80 E-value=3.9e-18 Score=174.53 Aligned_cols=293 Identities=13% Similarity=0.052 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+++++++|. + ..++++||++|+..++.+++..... +..+ ++.+|+.+...|.+...+++..
T Consensus 82 ~~~~~l~~~la~~~g~--~-------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~-~~~vi~~~~~yh~~~~~~~~~~ 149 (397)
T 2ord_A 82 RPQMELAELLSKNTFG--G-------KVFFANTGTEANEAAIKIARKYGKK--KSEK-KYRILSAHNSFHGRTLGSLTAT 149 (397)
T ss_dssp HHHHHHHHHHHHTTTS--C-------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT-CCEEEEEBTCCCCSSHHHHHHS
T ss_pred HHHHHHHHHHHHhcCC--C-------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC-CceEEEEcCCcCCCchhhhhcc
Confidence 4555666788888873 2 6799999999999998887642111 0000 2345556666777777777777
Q ss_pred CCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc----ccChhHHHHHHHHh
Q 048643 212 GID---------LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA----VDPLKPLCDVAKQF 278 (506)
Q Consensus 212 G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~----idpl~~I~~ia~~~ 278 (506)
|.. ...++.+|. .|+++|++++++. +.+|+++.+++++|. .+++++|+++|++|
T Consensus 150 g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~ 216 (397)
T 2ord_A 150 GQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDEY 216 (397)
T ss_dssp BCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHHc
Confidence 761 011666764 2899999988642 458888889999999 37899999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
|+++++|++|+++............++ ..|.+++ +|+++.++.+|++++++.. . .+... ..
T Consensus 217 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~~--~-~l~~~----~~--------- 277 (397)
T 2ord_A 217 DALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAVIVNERA--N-VLEPG----DH--------- 277 (397)
T ss_dssp TCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECSTT--C-CCCTT----SS---------
T ss_pred CCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEEEEchHh--c-ccCCC----Cc---------
Confidence 999999999975322111111111122 3676655 7999977889999887642 1 22110 00
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEEeecCCCcccc
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMDKLKPKYENCH 429 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f~~~~~~~~~~ 429 (506)
.. +. ..-......+..+|+.+.. +++.++..++++++.+.|++. +.+. + +++.|++....
T Consensus 278 -~~--~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~---- 346 (397)
T 2ord_A 278 -GT--TF-GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV---- 346 (397)
T ss_dssp -CC--SS-TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS----
T ss_pred -CC--CC-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH----
Confidence 00 00 0001112233344444433 356677778888888888764 3222 2 67777764320
Q ss_pred cccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 430 SQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
...++.+.|.+.|+. +.+. +..++|+++ +..+++++++++++.|+++.++
T Consensus 347 -------------~~~~l~~~l~~~gi~-v~~~---~~~~iRis~-~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 347 -------------SNREVATKCFENKLL-VVPA---GNNTIRFLP-PLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp -------------CHHHHHHHHHHTTEE-CEEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred -------------HHHHHHHHHHHCCCE-EccC---CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHhh
Confidence 124566777777764 4432 346899997 4567899999999999988654
No 166
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.79 E-value=1.1e-17 Score=170.76 Aligned_cols=291 Identities=13% Similarity=0.058 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+++++++|. + ..++++|||+|+..++.+++.......+.. .++..|++...+|.+....+..++
T Consensus 79 ~~~~l~~~la~~~g~-~--------~v~~~~~gt~a~~~al~~~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~ 148 (392)
T 3ruy_A 79 QLGPWYEKVAKLTNK-E--------MVLPMNTGAEAVETAIKTARRWAYDVKKVE-ANRAEIIVCEDNFHGRTMGAVSMS 148 (392)
T ss_dssp THHHHHHHHHHHHTC-S--------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTCCCCSSHHHHHTC
T ss_pred HHHHHHHHHHHhcCC-C--------EEEEeCcHHHHHHHHHHHHHHhhhhccCCC-CCCcEEEEEcCCcCCCCHhhhhcc
Confidence 345566788888882 2 679999999999999988775421111111 124466666666654444443332
Q ss_pred CC-C---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHh
Q 048643 213 ID-L---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQF 278 (506)
Q Consensus 213 ~g-~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~ 278 (506)
.. . ..+..++. .|+++|+++|+++ +.+|+++.+++++|.+.| +++|+++|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~ 215 (392)
T 3ruy_A 149 SNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVCKKE 215 (392)
T ss_dssp SCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTT
T ss_pred CChhhccccCCCCCCCeeeCc-------ccHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 21 0 12444432 2899999998733 457888889999999988 99999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 279 GIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 279 g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
|+++|+|++|+++............++ ..|.++++ |++... ...|++++++ .. .+.+.. +...
T Consensus 216 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~-~~-~~~~~~---~~~~-------- 279 (392)
T 3ruy_A 216 NVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANR-DI-LGVFEP---GSHG-------- 279 (392)
T ss_dssp TCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECH-HH-HTTCCT---TSSC--------
T ss_pred CCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECH-HH-Hhhhcc---CCcC--------
Confidence 999999999975432111111111222 46777775 987654 5688887754 22 222211 0000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC--CCCc---c--ceEEEeecCCCccccc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD--KRVS---P--SAVMDKLKPKYENCHS 430 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~--~~~~---p--~~v~f~~~~~~~~~~~ 430 (506)
.+.....+...+++..+..-..+++.++..++++++.+.|++. +.+. + +++.|.+...
T Consensus 280 ---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~------ 344 (392)
T 3ruy_A 280 ---------STFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGIELNEP------ 344 (392)
T ss_dssp ---------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEEEESSC------
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEEEEcch------
Confidence 0001123333333333221112567788889999999999887 2233 2 6677765432
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 431 QQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
..++.+.|.+.|+ ++.+. +..++|+++ ...+++++++++++.|+++.
T Consensus 345 -------------~~~l~~~l~~~gi-~v~~~---~~~~iRi~~-~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 345 -------------ARPYCEQLKAAGL-LCKET---HENVIRIAP-PLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp -------------SHHHHHHHHTTTE-ECCCB---TTTEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHCCc-EEecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHh
Confidence 2456677777786 44432 246899997 35678889999999998764
No 167
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.79 E-value=1.4e-17 Score=170.66 Aligned_cols=297 Identities=13% Similarity=0.046 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+++++++|.+ ..++|+||++|+..++.+++.....+ +..+ ++.+|+.+...|.+...+....
T Consensus 81 ~~~~~l~~~la~~~~~~---------~v~~~~gg~~a~~~al~~~~~~~~~~-~~~g-~~~vi~~~~~y~~~~~~~~~~~ 149 (406)
T 4adb_A 81 EPVLRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKFAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAG 149 (406)
T ss_dssp HHHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH-TCTT-CCEEEEETTCCCCSSHHHHHHS
T ss_pred HHHHHHHHHHHhhCCCC---------eEEEeCcHHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCcHHHhhcc
Confidence 34556678889988754 57999999999999998877532211 1110 2445556666666656655554
Q ss_pred CCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-----cChhHHHHHHHH
Q 048643 212 GIDL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV-----DPLKPLCDVAKQ 277 (506)
Q Consensus 212 G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i-----dpl~~I~~ia~~ 277 (506)
|... .++..+|. .|+++|++++++. +.+|+++ +.+++|.+ +++++|+++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~ 215 (406)
T 4adb_A 150 GQPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNR 215 (406)
T ss_dssp SCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHH
T ss_pred CCccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHH
Confidence 4211 14444442 4899999988633 4467777 77888854 579999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
||+++|+|++|+++............++ ..|.+++ +|+++..+.+|+++.++. . .+.+... ...
T Consensus 216 ~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~~-~-~~~~~~~---~~~-------- 279 (406)
T 4adb_A 216 HNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATEE-C-ARVMTVG---THG-------- 279 (406)
T ss_dssp TTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-H-HHTCCTT---SSC--------
T ss_pred cCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcHH-H-HhhhccC---CcC--------
Confidence 9999999999975432221111112222 4677765 999996667888776542 2 2222210 000
Q ss_pred cCCCCccccCCCCCCchHHHH---HHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc--c---ceEEEeecCCC
Q 048643 358 VDYKDWQITLSRRFRSLKLWL---VIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS--P---SAVMDKLKPKY 425 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~---~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~--p---~~v~f~~~~~~ 425 (506)
.+-....+...+ +++.+.. +++.++..++++++.+.|++. +.+. + .++.|.+....
T Consensus 280 ---------~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 347 (406)
T 4adb_A 280 ---------TTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADY 347 (406)
T ss_dssp ---------CSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTT
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCc
Confidence 000112233333 3343322 567777888888888888764 1222 1 56677664420
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 048643 426 ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~~ 501 (506)
.....++.+.+.++|+. +.+ .+..++|+++ +..+++++|+++++.|+++.+++.++
T Consensus 348 ---------------~~~~~~~~~~l~~~gi~-v~~---~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~l~~~~~~ 403 (406)
T 4adb_A 348 ---------------AGQAKQISQEAAKAGVM-VLI---AGGNVVRFAP-ALNVSEEEVTTGLDRFAAACEHFVSR 403 (406)
T ss_dssp ---------------TTCHHHHHHHHHHTTEE-CEE---SSTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred ---------------HHHHHHHHHHHHHCCcE-Eee---cCCCeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 00135677777778864 333 2356899987 46778899999999999999887653
No 168
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=1.4e-17 Score=180.49 Aligned_cols=229 Identities=10% Similarity=0.087 Sum_probs=157.2
Q ss_pred HHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCC
Q 048643 137 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLK 216 (506)
Q Consensus 137 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~ 216 (506)
+.+.+|+++|.+.. .++++|+|.||..++.+... ++..|+++..+|.|+..++.+.|.
T Consensus 200 aE~~lA~~fGa~~a--------~~v~nGts~An~~ai~al~~-----------pGD~VLv~r~~H~S~~~~l~lsGa--- 257 (715)
T 3n75_A 200 AEQYIARVFNADRS--------YMVTNGTSTANKIVGMYSAP-----------AGSTILIDRNCHKSLTHLMMMSDV--- 257 (715)
T ss_dssp HHHHHHHHHTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHSCC---
T ss_pred HHHHHHHHhCCCCc--------eEECcHHHHHHHHHHHHhCC-----------CCCEEEECCCccHHHHHHHHHcCC---
Confidence 33678999998753 35666667899877766543 678899999999999999999999
Q ss_pred CeEEEecCCCCCcc----c-----CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 217 NFRAIKTTKSSSYG----L-----SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 217 ~v~~v~~~~~~~~~----~-----d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
+++.++.+.+ ++. + |+++|+++|++..+ .+.|.+|+++.+ |++|.+.|+++|+++|+++ +++||+|
T Consensus 258 ~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEA 332 (715)
T 3n75_A 258 TPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSA 332 (715)
T ss_dssp EEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECT
T ss_pred EEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEccc
Confidence 9999987643 333 3 89999999987432 123557888888 8999999999999999876 4899999
Q ss_pred cccccccCccchhh--hcCCCCCCee---EEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCC
Q 048643 288 YAGSACICPEFQHF--IDGVEGADSF---SLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKD 362 (506)
Q Consensus 288 ~gg~~~~~~~~~~~--~~gi~~aDsi---~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 362 (506)
|++++.+.+.++.. +..-..+|.+ +.++||+|+++.++|++++++... ...+.....++..
T Consensus 333 H~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-~~~~~~~~~~~~S------------- 398 (715)
T 3n75_A 333 WVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETFNEAYMMHTT------------- 398 (715)
T ss_dssp TCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-HHHHHHHHHHTSC-------------
T ss_pred cccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-HHHHHHHHHhhcC-------------
Confidence 99876555544321 1110137876 899999999998999999986521 1112111111111
Q ss_pred ccccCCCCC-CchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC
Q 048643 363 WQITLSRRF-RSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK 410 (506)
Q Consensus 363 ~~~~~sr~~-~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 410 (506)
.|-.. ....+-.+++.+-.+.-.+++++..+++++|++.|++++
T Consensus 399 ----TSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 399 ----TSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp ----SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 01010 111223344444322234577899999999999998764
No 169
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.79 E-value=2.2e-17 Score=167.32 Aligned_cols=283 Identities=10% Similarity=0.058 Sum_probs=177.1
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCC-chHHHHHHHHhC
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LVVYGSDQT-HCALQKAAQIVG 212 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~-H~s~~ka~~~~G 212 (506)
.++.+++++++|++ + ..++++||++|+..++.+++..... +. ++ ..|+++..+ |.+...+....|
T Consensus 73 ~~l~~~la~~~g~~-~-------~v~~~~g~t~a~~~~~~~~~~~~~~--~~---~g~~~vl~~~~~y~~~~~~~~~~~~ 139 (375)
T 2eh6_A 73 EELAHKLVKHFWTE-G-------KVFFANSGTESVEAAIKLARKYWRD--KG---KNKWKFISFENSFHGRTYGSLSATG 139 (375)
T ss_dssp HHHHHHHHHTSSSC-E-------EEEEESSHHHHHHHHHHHHHHHHHH--TT---CCCCEEEEEBTCCCCSSHHHHHHCB
T ss_pred HHHHHHHHhhcCCC-C-------eEEEeCchHHHHHHHHHHHHHHhcc--CC---CCCCEEEEECCCcCCCchhhhhhcC
Confidence 34557888888884 3 6899999999999988775432100 01 23 455555555 555444444333
Q ss_pred CC-----C----CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhC
Q 048643 213 ID-----L----KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 279 (506)
Q Consensus 213 ~g-----~----~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g 279 (506)
.. . ..+..+|. +|+++|+++++++ +.+|+++..++++|.+.| +++|+++|++||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~ 206 (375)
T 2eh6_A 140 QPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKD 206 (375)
T ss_dssp CGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHT
T ss_pred CccccCCCCCCCCCceeCCC-------chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 21 0 01333332 5899999888642 457888889999999977 999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
+++++|++|+++............+. ..|.++++ |+++.+.++|++++++. +.+.+... .+.
T Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~--~~~~~~~~-~~~------------ 268 (375)
T 2eh6_A 207 VLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAILAREE--VAQSFTPG-SHG------------ 268 (375)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH--HHTTCCTT-SCC------------
T ss_pred CEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH--HHhhhcCC-CCC------------
Confidence 99999999986322111111111121 47888776 88888889999998753 22222210 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-c---ceEEEeecCCCcccccccccc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-P---SAVMDKLKPKYENCHSQQLVT 435 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-p---~~v~f~~~~~~~~~~~~~~~~ 435 (506)
. +. ....+...+++..+.. +.+..++..++++++.+.|++.+... + .++.+++...
T Consensus 269 -~--~~----~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~----------- 328 (375)
T 2eh6_A 269 -S--TF----GGNPLACRAGTVVVDE--VEKLLPHVREVGNYFKEKLKELGKGKVKGRGLMLGLELERE----------- 328 (375)
T ss_dssp -C--SS----TTCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTSSEEEEETTEEEEECSSC-----------
T ss_pred -C--CC----CCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEEcCc-----------
Confidence 0 00 1123333333332211 12677888889999999998875433 3 6677766432
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 436 EEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 436 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
..++.+.|.++|+. +.+. +..++|+++ +..+++++++++++.|+++
T Consensus 329 --------~~~~~~~l~~~gi~-~~~~---~~~~iRi~~-~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 329 --------CKDYVLKALEKGLL-INCT---AGKVLRFLP-PLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp --------CHHHHHHHHHTTEE-CEEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHCCCE-EecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHh
Confidence 13456666667764 3332 346899998 3567888999999999865
No 170
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.79 E-value=9e-18 Score=171.97 Aligned_cols=305 Identities=11% Similarity=0.020 Sum_probs=194.5
Q ss_pred CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE--cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC
Q 048643 121 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI--QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD 198 (506)
Q Consensus 121 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~--t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~ 198 (506)
...|....+..++.+.+.+|+....|.+.+. ...++ |+||++|+..++.+.+... + ++..|+++.
T Consensus 64 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~v~t~G~~~al~~~~~~l~~~~-~-------~gd~Vlv~~ 130 (401)
T 7aat_A 64 DKEYLPIAGLADFTRASAELALGENSEAFKS-----GRYVTVQGISGTGSLRVGANFLQRFF-K-------FSRDVYLPK 130 (401)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEEEEEHHHHHHHHHHHHHHHHC-T-------TCCEEEEEE
T ss_pred ccCCCCCCCCHHHHHHHHHHhcCCCcccccc-----CceEEEecCcchHHHHHHHHHHHHhc-c-------CCCEEEEcC
Confidence 3455555667889889999988776653211 25655 9999999988876654310 1 566788888
Q ss_pred CCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc---cChhHHHHHH
Q 048643 199 QTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV---DPLKPLCDVA 275 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i---dpl~~I~~ia 275 (506)
.+|..+...++..|. +++.+|.+..+++.+|++.|++.+++. ...+.+|+.+.++|+||.+ +++++|+++|
T Consensus 131 p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~ 204 (401)
T 7aat_A 131 PSWGNHTPIFRDAGL---QLQAYRYYDPKTCSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVV 204 (401)
T ss_dssp SCCTTHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHcCC---eeEeeeeeccccCccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999 999999864446899999999888752 1235678889999999966 5688999999
Q ss_pred HHhCCEEEeecccccccccCc-----cchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEe--Cchh---HHhhhcCCc
Q 048643 276 KQFGIWVHVDAAYAGSACICP-----EFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVK--DPSA---LVSSLSTNP 344 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~-----~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r--~~~~---l~~~~~~~~ 344 (506)
++||+++++|.+|+.+..-.. ...... ....-..++.+++|.++.| ..+|++++. ++.. +...+..
T Consensus 205 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~-- 281 (401)
T 7aat_A 205 KKRNLLAYFDMAYQGFASGDINRDAWALRHFI-EQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKI-- 281 (401)
T ss_dssp HHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-HTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHH--
T ss_pred HhCCcEEEEccccccccCCCccccHHHHHHHH-hcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHH--
Confidence 999999999999976543211 011111 1223445778899999854 457887763 3331 1111110
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh--c------hhHHHHHHHHHHHHHHHHHHHHHcCC---CCc
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--G------VANLRHFLRSHVNMAKLFERLVASDK---RVS 413 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G------~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~ 413 (506)
+.... + .+ ..+.....+...+ + .+.++++.++..++++++.+.|++.. +++
T Consensus 282 -~~~~~-------------~-~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 343 (401)
T 7aat_A 282 -LIRPM-------------Y-SN---PPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQ 343 (401)
T ss_dssp -HHHHH-------------H-SS---CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCH
T ss_pred -HHHhc-------------c-CC---CChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 00000 0 00 0122222232222 1 34466777888889999999998872 355
Q ss_pred ---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHH
Q 048643 414 ---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 414 ---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li 488 (506)
| +.+.|. +- + .+.+...+.+.|+ ++.+ .+|++++ ..+++ +|++++
T Consensus 344 ~~~~~~~~~~~~--~~-----------~-------~~~~~~ll~~~gi-~v~~-------~~Ris~~-~~~~~-~i~~~~ 393 (401)
T 7aat_A 344 HITDQIGMFCFT--GL-----------K-------PEQVERLTKEFSI-YMTK-------DGRISVA-GVASS-NVGYLA 393 (401)
T ss_dssp HHHHCCSSEEEC--CC-----------C-------HHHHHHHHHHHCE-ECCT-------TCEEEGG-GCCTT-THHHHH
T ss_pred eecCCcceEEec--CC-----------C-------HHHHHHHHHhCCE-eccC-------CCeEEec-cCChh-hHHHHH
Confidence 4 444442 11 0 1222222344565 4433 2699995 34454 699999
Q ss_pred HHHHHHH
Q 048643 489 TMVQEQL 495 (506)
Q Consensus 489 ~~l~~~~ 495 (506)
+.|+++.
T Consensus 394 ~~l~~~~ 400 (401)
T 7aat_A 394 HAIHQVT 400 (401)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998764
No 171
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.79 E-value=3.9e-18 Score=175.40 Aligned_cols=319 Identities=8% Similarity=-0.010 Sum_probs=199.4
Q ss_pred HHHHHHHHh-hcCCC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE--cCCchHHHHHHHHHHHHHHHH
Q 048643 107 GFLGEMLSS-GFNVV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI--QGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 107 ~~~~~~l~~-~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~--t~ggt~a~l~al~~ar~~~~~ 182 (506)
..+.+.+.. .+... ...|...++..++++.+.+|+....|.+.+. ...++ |+||++|+..++..++.. .
T Consensus 50 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~t~g~~~a~~~~~~~~~~~--~ 122 (412)
T 1yaa_A 50 PSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQE-----DRVISVQSLSGTGALHISAKFFSKF--F 122 (412)
T ss_dssp HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEEEEEHHHHHHHHHHHHHHHH--C
T ss_pred HHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCc-----ceEEEEeccchHhHHHHHHHHHHHh--C
Confidence 345555555 44422 2345455667889999888887665632111 26788 999999988775443321 1
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEec-CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKT-TKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA 261 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~ 261 (506)
++..|+++..+|.++...++..|. +++.+|. +++ ++.+|+++|++++++.. ....+++.+.++|+
T Consensus 123 -------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~-~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nP 188 (412)
T 1yaa_A 123 -------PDKLVYLSKPTWANHMAIFENQGL---KTATYPYWANE-TKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNP 188 (412)
T ss_dssp -------TTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEETT-TTEECHHHHHHHHHHSC---TTCEEEEECSSCTT
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCc---eEEEEeeecCC-CCccCHHHHHHHHHhCC---CCCEEEEeCCCCCC
Confidence 445677788899999999999999 9999998 432 47899999999997531 12345566899999
Q ss_pred CCccc---ChhHHHHHHHHhCCEEEeecccccccccC---c--cchhhhcCCCC---CCeeEEcCccccCC-CCcceEEE
Q 048643 262 ITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIC---P--EFQHFIDGVEG---ADSFSLNAHKWFFT-TLDCCCLW 329 (506)
Q Consensus 262 tG~id---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~---~--~~~~~~~gi~~---aDsi~~~~hK~l~~-p~~~g~~~ 329 (506)
||.+- ++++|+++|++||+++++|++|+++..-. + ...... .... -+.+..+++|.++. ...+|+++
T Consensus 189 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 189 TGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGV-EKLSTVSPVFVCQSFAKNAGMYGERVGCFH 267 (412)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHH-HHTTTTCCEEEEEECTTTSCCGGGCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHH-hcCCCCcceEEEeccCCCCCCcCCcceEEE
Confidence 99995 46789999999999999999997553321 1 111111 1111 23557788999874 34478887
Q ss_pred --E----eCchh---HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHH
Q 048643 330 --V----KDPSA---LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFL 392 (506)
Q Consensus 330 --~----r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i 392 (506)
. +++.. +...+.. +... ...+ ...+..+++.+.+. .+.++++.
T Consensus 268 ~~~~~~~~~~~~~~~l~~~l~~---~~~~--------------~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 327 (412)
T 1yaa_A 268 LALTKQAQNKTIKPAVTSQLAK---IIRS--------------EVSN---PPAYGAKIVAKLLETPELTEQWHKDMVTMS 327 (412)
T ss_dssp EECCSCTTHHHHHHHHHHHHHH---HHHT--------------TTSS---CCHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHH---HHhh--------------ccCC---CChHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4 23331 2222211 0000 0000 01222233333331 24677888
Q ss_pred HHHHHHHHHHHHHHHcCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE
Q 048643 393 RSHVNMAKLFERLVASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC 464 (506)
Q Consensus 393 ~~~~~~a~~l~~~l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 464 (506)
++..++++++.+.|++.+ +++ | +++.|. .. + ...+...+.+.|+ ++.+
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~-----------~-------~~~~~~~l~~~gi-~v~~--- 383 (412)
T 1yaa_A 328 SRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFT--GL-----------T-------PQMVKRLEETHAV-YLVA--- 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEEC--CC-----------C-------HHHHHHHHHHHCE-ECCT---
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEee--CC-----------C-------HHHHHHHHHhCCE-Eecc---
Confidence 888999999999998874 476 4 555442 11 0 1234333445575 4443
Q ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 465 GGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 465 ~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
++|+++.. .+++++++++++|+++.+.
T Consensus 384 ----~~Ris~~~--~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 384 ----SGRASIAG--LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp ----TSEEEGGG--CCTTTHHHHHHHHHHHHHH
T ss_pred ----CcEEEEcc--CCHhHHHHHHHHHHHHHHh
Confidence 47999853 3677999999999988764
No 172
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.79 E-value=3e-18 Score=176.46 Aligned_cols=214 Identities=9% Similarity=0.078 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH---
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI--- 210 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~--- 210 (506)
-.++.+++++++|.+ ..++++||++|+..++.+... ++..|+++...|.+....++.
T Consensus 83 ~~~l~~~la~~~g~~---------~~~~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~ 142 (414)
T 3ndn_A 83 VSVFEERLRLIEGAP---------AAFATASGMAAVFTSLGALLG-----------AGDRLVAARSLFGSCFVVCSEILP 142 (414)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEESCCCHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCccchHHHHHHHHHH
Confidence 344456788888863 468899999998877765532 556788888899887776644
Q ss_pred -hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 211 -VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 211 -~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
+|+ +++.||.+ |+++|+++|++.+ .+|+++.++|++|.+.|+++|+++|++||+++++|++|+
T Consensus 143 ~~g~---~~~~v~~~-------d~~~l~~ai~~~t------~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~ 206 (414)
T 3ndn_A 143 RWGV---QTVFVDGD-------DLSQWERALSVPT------QAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFA 206 (414)
T ss_dssp HTTC---EEEEECTT-------CHHHHHHHTSSCC------SEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred HcCc---EEEEeCCC-------CHHHHHHhcCCCC------eEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCc
Confidence 888 88888863 8899999986543 378889999999999999999999999999999999998
Q ss_pred cccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccC
Q 048643 290 GSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITL 367 (506)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 367 (506)
.+....+. . .++|.++.+++|+++.+.. +|+++.++.. +...+...... .
T Consensus 207 ~~~~~~~~-~------~g~div~~S~sK~l~~~G~~~~G~vv~~~~~-~~~~l~~~~~~--------------------~ 258 (414)
T 3ndn_A 207 TPLLQQGF-P------LGVDVVVYSGTKHIDGQGRVLGGAILGDREY-IDGPVQKLMRH--------------------T 258 (414)
T ss_dssp HHHHCCCG-G------GTCSEEEEETTTTTTCSSCCCCEEEEECHHH-HTTHHHHHHHH--------------------H
T ss_pred ccccCCch-h------cCCCeEeccCCccccCCCCceEEEEEECHHH-HHHHHHHHHHH--------------------c
Confidence 65443322 1 1689999999999987542 6777765432 21111100000 0
Q ss_pred CCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 368 SRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 368 sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
+....++..|..++ +.+.+..++++..++++++.+.|++.|+++
T Consensus 259 g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 302 (414)
T 3ndn_A 259 GPAMSAFNAWVLLK--GLETLAIRVQHSNASAQRIAEFLNGHPSVR 302 (414)
T ss_dssp CCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred CCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEe
Confidence 11124456677666 456788889999999999999999887654
No 173
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.79 E-value=1.2e-16 Score=164.88 Aligned_cols=312 Identities=10% Similarity=0.042 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHc-CCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 134 ENIVMDWLGQML-KLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 134 E~~~~~~la~l~-g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
..++.+.+++++ | +.. ...++|+||++|+..++..++... + ++.+|+.+...|.+...++...|
T Consensus 86 ~~~l~~~la~~~~~-~~~------~~v~~~~g~~~a~~~~~~~a~~~~-~-------~~~vi~~~p~y~~~~~~~~~~~g 150 (426)
T 1sff_A 86 YLELCEIMNQKVPG-DFA------KKTLLVTTGSEAVENAVKIARAAT-K-------RSGTIAFSGAYHGRTHYTLALTG 150 (426)
T ss_dssp HHHHHHHHHHHSSC-SSC------EEEEEESSHHHHHHHHHHHHHHHH-T-------CCEEEEETTCCCCSSHHHHHHSS
T ss_pred HHHHHHHHHHhCCc-ccc------cEEEEeCchHHHHHHHHHHHHHhh-C-------CCeEEEECCCcCCCchHhhhhcC
Confidence 344556677777 4 221 168999999999999988665321 1 34455556666666777777766
Q ss_pred CC--------C--CCeEEEecCC---CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHH
Q 048643 213 ID--------L--KNFRAIKTTK---SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVA 275 (506)
Q Consensus 213 ~g--------~--~~v~~v~~~~---~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia 275 (506)
.. . ..++.+|.+. +.++.+|+++|++++++.. .+..+.+|+++...+++|.+.+ +++|+++|
T Consensus 151 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~ 229 (426)
T 1sff_A 151 KVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALC 229 (426)
T ss_dssp CCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHH
T ss_pred CccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 51 0 1277788753 1134689999999997421 1112446666543344997777 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCC
Q 048643 276 KQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESK 355 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 355 (506)
++||+++++|++|+++....+.......++ ..|.+ +++|+++..+.+|++++++. +.+.+... .+.
T Consensus 230 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~~--~~~~l~~~-~~~-------- 295 (426)
T 1sff_A 230 DEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRAE--VMDAVAPG-GLG-------- 295 (426)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEHH--HHTTSCTT-SBC--------
T ss_pred HHcCCEEEEechhhccCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcHH--HHhhhccC-CcC--------
Confidence 999999999999986422111111011122 36655 55699986566799988752 22222210 000
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---c--ceEEEeecCCCc
Q 048643 356 QVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS---P--SAVMDKLKPKYE 426 (506)
Q Consensus 356 ~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~---p--~~v~f~~~~~~~ 426 (506)
. +. .........+..+++.+..+ ++.++..++++++.+.|++ .+.+. | .++.+++.+...
T Consensus 296 -----~--~~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 364 (426)
T 1sff_A 296 -----G--TY-AGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGD 364 (426)
T ss_dssp -----C--SS-SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGC
T ss_pred -----c--CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCcc
Confidence 0 00 01011123334444544333 3456667777888877765 33332 3 667777642100
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 427 NCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
. + .+ + .....++.+.|.++|+. +.+... ...++|+++ +..+++++|+++++.|+++.+++
T Consensus 365 ~---~-~~-~----~~~~~~l~~~l~~~gi~-v~~~~~-~~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 365 H---N-KP-D----AKLTAEIVARARDKGLI-LLSCGP-YYNVLRILV-PLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp T---T-SB-C----HHHHHHHHHHHHHTTEE-CEEEST-TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred c---c-CC-C----hHHHHHHHHHHHHCCcE-EecCCC-CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 0 12245677777778864 443322 246899998 35678899999999999988765
No 174
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.78 E-value=1.2e-17 Score=173.39 Aligned_cols=319 Identities=11% Similarity=0.078 Sum_probs=186.5
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchH
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCA 203 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s 203 (506)
+..++...++|+. +++++|.+ ..+++++||+|+..++.+++...+.+... .++..|+++..+|.+
T Consensus 58 ~~~~~~~~~l~~~----la~~~g~~---------~~i~~~sGt~a~~~al~~l~~~~~~~~~~--~~gd~Vi~~~~~~~~ 122 (437)
T 3bb8_A 58 LTTGRFNDAFEKK----LGEYLGVP---------YVLTTTSGSSANLLALTALTSPKLGVRAL--KPGDEVITVAAGFPT 122 (437)
T ss_dssp CBSCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHTTCGGGGGGSC--CTTCEEEECSSSCHH
T ss_pred cCCChHHHHHHHH----HHHHHCCC---------cEEEeCCHHHHHHHHHHHhhhcccccccC--CCcCEEEECCCCcHH
Confidence 4455666666654 56666764 35888999999988887653100000000 145678899999999
Q ss_pred HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 204 LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 204 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
+..++...|. +++.+|++++ ++.+|+++|++++++. +.+|+++. .+|...|+++|+++|+++|+++|
T Consensus 123 ~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li 189 (437)
T 3bb8_A 123 TVNPTIQNGL---IPVFVDVDIP-TYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLI 189 (437)
T ss_dssp HHHHHHHTTC---EEEECCEETT-TTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHcCC---EEEEEeccCc-cCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEE
Confidence 9999999999 9999998753 5799999999988653 33566653 46788999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc-ceEEEEeCchhHHhhhcCCccccCC-------------
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSALVSSLSTNPEYLKN------------- 349 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~------------- 349 (506)
+|+||+.+.... .+.. + ...|.++.+++|....|.+ +|+++.++. .+...+.....+-..
T Consensus 190 ~D~a~~~g~~~~--~~~~--~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (437)
T 3bb8_A 190 EDCCDALGSTYD--GKMA--G-TFGDIGTVSFYPAKHITMGEGGAVFTQSA-ELKSIIESFRDWGRDCYCAPGCDNTCKK 263 (437)
T ss_dssp EECTTCTTCEET--TEET--T-SSSSEEEEECSTTSSSCCSSCEEEEESCH-HHHHHHHHHHBTTBCC------------
T ss_pred EECccccCceEC--Ceec--c-cccCEEEEECcCCcCCCCCCeEEEEeCCH-HHHHHHHHHHHhCccccccccccccccc
Confidence 999998554431 1111 1 1367766664333322433 355554433 332221110011100
Q ss_pred -ccccCCCcc-CC-CCcc---ccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c-------
Q 048643 350 -KATESKQVV-DY-KDWQ---ITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P------- 414 (506)
Q Consensus 350 -~~~~~~~~~-~~-~~~~---~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p------- 414 (506)
......... .+ ..++ ....-+...+...+++..+ +.+.+.+++..++++++.+.|++.+++. |
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 341 (437)
T 3bb8_A 264 RFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQL--ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSD 341 (437)
T ss_dssp ----CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEE
T ss_pred ccccccccccccccccccccccCcccCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCc
Confidence 000000000 00 0000 0111112233333344433 4456777888899999999999886643 2
Q ss_pred -c--eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee---------EC--C--------------
Q 048643 415 -S--AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV---------CG--G-------------- 466 (506)
Q Consensus 415 -~--~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~--g-------------- 466 (506)
+ .+.+.+.... .....++.+.|.++|+. +.... +. +
T Consensus 342 ~~~~~~~~~~~~~~---------------~~~~~~l~~~L~~~GI~-v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 405 (437)
T 3bb8_A 342 PSWFGFPITLKEDS---------------GVSRIDLVKFLDEAKVG-TRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIM 405 (437)
T ss_dssp CCCSSEEEEECGGG---------------SSCHHHHHHHHHHTTBC-CBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHH
T ss_pred eeeEEEEEEECCcC---------------cCcHHHHHHHHHHCCCc-eeccCCcccccCchhhccCccccCCCcHHHHHh
Confidence 1 1233332110 00124577777777873 22110 00 0
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 467 IYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 467 ~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
...+|+++ ++.+|++||++++++|+++.
T Consensus 406 ~~~lrl~~-~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 406 NQTFWIGI-YPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp HHEEEECC-STTCCHHHHHHHHHHHHHHT
T ss_pred cCEEEecC-CCCCCHHHHHHHHHHHHHHH
Confidence 13599987 68889999999999998864
No 175
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.78 E-value=1.7e-17 Score=169.40 Aligned_cols=312 Identities=11% Similarity=0.058 Sum_probs=195.7
Q ss_pred HHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE--cCCchHHHHHHHHHHHHHHHHhh
Q 048643 108 FLGEMLSSGFNV-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI--QGTTCEAILCTLTAARDRVLNKI 184 (506)
Q Consensus 108 ~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~--t~ggt~a~l~al~~ar~~~~~~~ 184 (506)
.+.+.+...+.. ....|.......++++.+.+|+... +.+.+ ..++ |+||++|+..++.+++...
T Consensus 48 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~---- 115 (394)
T 2ay1_A 48 AVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSE-------TTATLATVGGTGALRQALELARMAN---- 115 (394)
T ss_dssp HHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGG-------GEEEEEEEHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcc-------cEEEEecCCchhHHHHHHHHHHhcC----
Confidence 344444443321 2334544455678888888887432 22333 5777 9999999988887765420
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 185 GRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 185 ~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..|+++..+|.++...++..|. +++.+|.+..+++.+|+++|++++++. .....+++.+.++|+||.
T Consensus 116 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG~ 184 (394)
T 2ay1_A 116 -----PDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTGA 184 (394)
T ss_dssp -----TTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTCC
T ss_pred -----CCCEEEEcCCCChhHHHHHHHcCC---ceEEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCC
Confidence 344577778899999999999999 999999853235789999999999753 112456777899999999
Q ss_pred ccC---hhHHHHHHHHhCCEEEeecccccccccC--c--cchhhhcCCCCCC-eeEEcCccccCC-CCcceEEEE--eCc
Q 048643 265 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC--P--EFQHFIDGVEGAD-SFSLNAHKWFFT-TLDCCCLWV--KDP 333 (506)
Q Consensus 265 idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~--~--~~~~~~~gi~~aD-si~~~~hK~l~~-p~~~g~~~~--r~~ 333 (506)
+-| +++|+++|++||+++++|++|+++..-. + ..... ... ..+ .+..+++|+++. ...+|++++ +++
T Consensus 185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~-~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 262 (394)
T 2ay1_A 185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI-ASR-IPEVLIAASCSKNFGIYRERTGCLLALCADA 262 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH-HHH-CSSEEEEEECTTTTTCGGGCEEEEEEECSSH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHH-hhc-CCCEEEEEeccCCCcCcCCccceEEEEeCCH
Confidence 865 6688999999999999999997654310 0 01111 111 223 446678999984 355798887 344
Q ss_pred hhH---HhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHHHHHHHHHH
Q 048643 334 SAL---VSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRSHVNMAKLF 402 (506)
Q Consensus 334 ~~l---~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~~~~~a~~l 402 (506)
+.+ ...+.. .... +..+ ...+..+++.+.+. .+.++++.++..++++++
T Consensus 263 ~~~~~l~~~~~~---~~~~--------------~~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 322 (394)
T 2ay1_A 263 ATRELAQGAMAF---LNRQ--------------TYSF---PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQL 322 (394)
T ss_dssp HHHHHHHHHHHH---HHHT--------------TTSS---CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHhh--------------hcCC---CChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 111110 0000 0001 12233333333331 246777888888899999
Q ss_pred HHHHHcCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEe
Q 048643 403 ERLVASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAV 474 (506)
Q Consensus 403 ~~~l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~ 474 (506)
.+.|++.+ +++ | +.+.|- .-+ . ..+.+.+.+.|+ ++.+ .+|+++
T Consensus 323 ~~~L~~~~~~~~~~~~~~~~g~~~~~-~~~----------------~---~~~~~~l~~~gi-~v~~-------~~Ris~ 374 (394)
T 2ay1_A 323 AGELRDLSGSDRFGFVAEHRGMFSRL-GAT----------------P---EQVKRIKEEFGI-YMVG-------DSRINI 374 (394)
T ss_dssp HHHHHHHHTSSTTTHHHHCCSSEEEC-CCC----------------H---HHHHHHHHHHCE-ECCT-------TCEEEG
T ss_pred HHHHHhcCCCCCeeEEcCCceEEEee-CCC----------------H---HHHHHHHHhCCE-EecC-------CCeEEe
Confidence 99998763 466 3 344332 111 1 234445556676 4443 269998
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 048643 475 GATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 475 ~~~~tt~edi~~li~~l~~~ 494 (506)
. .+++++|++++++|+++
T Consensus 375 ~--~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 375 A--GLNDNTIPILARAIIEV 392 (394)
T ss_dssp G--GCCTTTHHHHHHHHHHH
T ss_pred e--cCCHhhHHHHHHHHHHc
Confidence 5 35778999999999876
No 176
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.77 E-value=1.5e-17 Score=172.16 Aligned_cols=300 Identities=12% Similarity=0.027 Sum_probs=192.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCch
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHC 202 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~ 202 (506)
.|...+...++++.+.+|+.+-++.+.+ ..++|+|+++++.. +..... ++..|+++...|.
T Consensus 93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~~-------~i~~t~G~~~al~~-l~~l~~-----------~gd~Vl~~~p~y~ 153 (432)
T 3ei9_A 93 GYGAEQGAKPLRAAIAKTFYGGLGIGDD-------DVFVSDGAKCDISR-LQVMFG-----------SNVTIAVQDPSYP 153 (432)
T ss_dssp CCCCTTCCHHHHHHHHHHHHTTTTCCGG-------GEEEESCHHHHHHH-HHHHHC-----------TTCCEEEEESCCT
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCCcc-------eEEECCChHHHHHH-HHHHcC-----------CCCEEEEeCCCCH
Confidence 4544556789999999999875565544 78899998877653 322211 5567888899999
Q ss_pred HHHHHHHHhCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhH
Q 048643 203 ALQKAAQIVGIDL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKP 270 (506)
Q Consensus 203 s~~ka~~~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~ 270 (506)
++..+++.+|... .+++.+|++.++++..|++. ...+.+|+++.++|++|.+- ++++
T Consensus 154 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~~ 222 (432)
T 3ei9_A 154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTGAAATREQLTQ 222 (432)
T ss_dssp HHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 9999999888421 26889998754334455332 01234677788999999885 4778
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEcCccccC-CCCcceEEEEeCchh------HHhhhc
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEFQHF--IDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSA------LVSSLS 341 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~------l~~~~~ 341 (506)
|+++|++||+++++|++|+.+..-. ..... +.+....+.+..+++|+++ ....+|++++++... +...+.
T Consensus 223 l~~la~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 301 (432)
T 3ei9_A 223 LVEFAKKNGSIIVYDSAYAMYMSDD-NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFN 301 (432)
T ss_dssp HHHHHHHHTCEEEEECTTGGGCCSS-CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHH
T ss_pred HHHHHHHcCcEEEEccchHhhccCC-CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHH
Confidence 8888999999999999998754321 11111 1112244577889999998 556789888876431 011111
Q ss_pred CCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 342 TNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNY---GVANLRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 342 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
....+.. -....+...+++..+ +.+.+.++.++..++++++.+.|++. +++ |
T Consensus 302 ~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 360 (432)
T 3ei9_A 302 RIICTCF--------------------NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGK 360 (432)
T ss_dssp HHHHHSC--------------------CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECS
T ss_pred HHhcccc--------------------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCC
Confidence 0000000 001223334444443 34567888899999999999999987 776 3
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAW 488 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li 488 (506)
.++.+.+.... ..++.+.+.++ |+. +.+.. + .+..++|+++. +++++|++++
T Consensus 361 ~~~~~~~~~~~~~------------------~~~~~~~ll~~~gv~-v~~g~~f~~~~~~~iRis~~---~~~e~l~~~l 418 (432)
T 3ei9_A 361 NAPYVWVHFPNQS------------------SWDVFAEILEKTHVV-TTPGSGFGPGGEGFVRVSAF---GHRENILEAC 418 (432)
T ss_dssp SSSEEEEECTTSC------------------HHHHHHHHHHHHCEE-CEEGGGGCGGGTTEEEEECC---SCHHHHHHHH
T ss_pred cceEEEEECCCCC------------------HHHHHHHHHHHCCEE-EeCchHhCCCCCCEEEEEec---CCHHHHHHHH
Confidence 45666554210 23445555544 664 44432 2 24578999974 3788999999
Q ss_pred HHHHHHHH
Q 048643 489 TMVQEQLE 496 (506)
Q Consensus 489 ~~l~~~~~ 496 (506)
+.|++.-.
T Consensus 419 ~rl~~~~~ 426 (432)
T 3ei9_A 419 RRFKQLYK 426 (432)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 98887543
No 177
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.77 E-value=1.5e-17 Score=170.85 Aligned_cols=213 Identities=15% Similarity=0.115 Sum_probs=144.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+. +++++|.+ ..+++++|++|+..++. ... ++..|+++...|.+..
T Consensus 65 ~~p~~~~l~~~----la~~~g~~---------~~i~~~sG~~ai~~~~~-l~~-----------~gd~Vl~~~~~y~~~~ 119 (403)
T 3cog_A 65 GNPTRNCLEKA----VAALDGAK---------YCLAFASGLAATVTITH-LLK-----------AGDQIICMDDVYGGTN 119 (403)
T ss_dssp -CHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHH
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHH-HhC-----------CCCEEEEeCCCcchHH
Confidence 34555666655 55666664 23556666788776654 311 5567888889998755
Q ss_pred HH----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC-C
Q 048643 206 KA----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG-I 280 (506)
Q Consensus 206 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g-~ 280 (506)
.. ++..|+ +++.+|.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|+++| +
T Consensus 120 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~ 183 (403)
T 3cog_A 120 RYFRQVASEFGL---KISFVDCS-------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDI 183 (403)
T ss_dssp HHHHHTGGGGTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCC
T ss_pred HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCC
Confidence 54 356788 88888863 789999888653 447888999999999999999999999999 9
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCcc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
++++|++|+.+....+ .. -++|.+..++||+++.|.+ +|+++++++.... .+.......
T Consensus 184 ~livD~~~~~~~~~~~-~~------~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~-~l~~~~~~~----------- 244 (403)
T 3cog_A 184 ILVVDNTFMSPYFQRP-LA------LGADISMYSATKYMNGHSDVVMGLVSVNCESLHN-RLRFLQNSL----------- 244 (403)
T ss_dssp EEEEECTTTCTTTCCT-TT------TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHH-HHHHHHHHH-----------
T ss_pred EEEEECCCcccccCCc-cc------cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHH-HHHHHHHhc-----------
Confidence 9999999987654222 11 1689999999999998876 5888887654332 221100000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD 409 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~ 409 (506)
+-....+..|+.++.+ +.+..++++..+++..+.+.+++.
T Consensus 245 ---------g~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~ 284 (403)
T 3cog_A 245 ---------GAVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESN 284 (403)
T ss_dssp ---------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ---------CCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0011335566666644 345556667777777777777654
No 178
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.77 E-value=5.9e-18 Score=174.10 Aligned_cols=331 Identities=13% Similarity=0.048 Sum_probs=193.7
Q ss_pred HHHHHHHHhhcCCCC-----cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 048643 107 GFLGEMLSSGFNVVG-----FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVL 181 (506)
Q Consensus 107 ~~~~~~l~~~~n~~~-----~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~ 181 (506)
..+.+.+...+.... ..|....+..++++.+.+|+.+.+|++.+. ...++|+||++|+..++.+....
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~~-- 121 (417)
T 3g7q_A 49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP-----QNIALTNGSQSAFFYLFNLFAGR-- 121 (417)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSBC--
T ss_pred HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCCcHHHHHHHHHHHcCC--
Confidence 445555555443221 245555667899999999999988875432 37899999999998887766431
Q ss_pred HhhcccCCCCeEEEeC-CCCchHHHHHHHHh----CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 048643 182 NKIGRENISKLVVYGS-DQTHCALQKAAQIV----GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT 256 (506)
Q Consensus 182 ~~~~~~~~~~~~v~~s-~~~H~s~~ka~~~~----G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t 256 (506)
|.++ .+..|+++ ...|..+...+... +.+ -.+..++.+. .++.+|+++|+ +.+ .+.+|+++
T Consensus 122 ---gd~~-~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~d~~~l~--~~~------~~~~v~~~ 187 (417)
T 3g7q_A 122 ---RADG-STKKVLFPLAPEYIGYADSGLEDDLFVSAR-PNIELLPEGQ-FKYHVDFEHLH--IGE------ETGMICVS 187 (417)
T ss_dssp --------CCBEEEESSCCCHHHHHC-----CCEEECC-CEEEEEGGGE-EEEECCGGGCC--CCT------TEEEEEEE
T ss_pred ---CccC-CcceEEEeCCCccccchhhccchhhhcccc-CcccccCCcc-cccccCHHHhc--ccc------CceEEEEC
Confidence 1000 11256666 67777776655332 221 1334444321 13578999987 322 24578888
Q ss_pred ccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCc
Q 048643 257 IGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP 333 (506)
Q Consensus 257 ~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 333 (506)
.++|+||.+-| +++|+++|++||+++++|++|+.+.... .+..........+.+..+++|++.....+|+++.. +
T Consensus 188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~ 265 (417)
T 3g7q_A 188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIAN-D 265 (417)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECC-H
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEEEeC-H
Confidence 99999999977 8999999999999999999997532111 11111111234567788899976566678877653 3
Q ss_pred hhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHH----H-HHHHHHHHHHHHHHHHHc
Q 048643 334 SALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLR----H-FLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 334 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~----~-~i~~~~~~a~~l~~~l~~ 408 (506)
.. ...+.....+. +.....+...++...+....+. + +.++..++.+++.+.|.+
T Consensus 266 ~~-~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 266 KT-ITAIANMNGII--------------------SLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp HH-HHHHHHHHHHH--------------------CCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHhhcce--------------------eeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 22221100000 0001223333333333222222 2 444556677777777765
Q ss_pred -CCC--Cc---c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-C--------EEEE
Q 048643 409 -DKR--VS---P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-G--------IYAM 470 (506)
Q Consensus 409 -~~~--~~---p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g--------~~~l 470 (506)
+++ ++ | ..+.+.+..... ...++.+.+.+.|+.+..+..+. + ..++
T Consensus 325 ~l~~~~~~~~~~~~g~~~~~~~~~~~~----------------~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~i 388 (417)
T 3g7q_A 325 YLSEERCLIHKPEGAIFLWLWFKDLPI----------------TTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCM 388 (417)
T ss_dssp HCCTTTCEEECCCBSSEEEEECTTCSS----------------CHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEE
T ss_pred hcccCCceeeCCCcceEEEEEcCCCCC----------------CHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeE
Confidence 453 44 4 445555543110 12456667777786544332221 1 4689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 471 RFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
|+++.. ++++|+++++.|.++.+++.+
T Consensus 389 Ris~~~---~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 389 RMNYVP---EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp EEESCS---CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecC---CHHHHHHHHHHHHHHHHHHHh
Confidence 999852 788999999999999887754
No 179
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.77 E-value=5e-17 Score=167.78 Aligned_cols=300 Identities=13% Similarity=0.048 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.+++++++|.+ ..++++||++|+..++.+++.....+ |..+ ++.+|+.+...|.+...++..
T Consensus 98 ~~~~~~l~~~la~~~g~~---------~v~~~~ggteA~~~al~~~~~~~~~~-~~~g-~~~vi~~~~~yh~~~~~~~~~ 166 (420)
T 2pb2_A 98 NEPALRLGRKLIDATFAE---------RVLFMNSGTEANETAFKLARHYACVR-HSPF-KTKIIAFHNAFHGRSLFTVSV 166 (420)
T ss_dssp CHHHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhc-cCCC-CCEEEEEeCCcCCcCHHHHHh
Confidence 345566677888888742 67999999999999999887643211 1111 224555555667666666666
Q ss_pred hCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc----ccChhHHHHHHHH
Q 048643 211 VGID---------LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA----VDPLKPLCDVAKQ 277 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~----idpl~~I~~ia~~ 277 (506)
.|.. ...++.+|. .|+++|+++|++. +.+|+++...+++|. .+++++|+++|++
T Consensus 167 ~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~ 233 (420)
T 2pb2_A 167 GGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDE 233 (420)
T ss_dssp SSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred cCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHH
Confidence 5541 012555553 2899999988643 446777766666665 3789999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
||+++++|++|.++......+.....++ ..|.+++ +|+++.++.+|+++++++ +.+.+... ...
T Consensus 234 ~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~~~~~~--l~~~l~~~----~~~------- 297 (420)
T 2pb2_A 234 HQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAMLTTQE--IASAFHVG----SHG------- 297 (420)
T ss_dssp TTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH--HHTTCC--------C-------
T ss_pred cCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEEEEhHH--HHHhhcCC----CcC-------
Confidence 9999999999976432111111111233 4687754 799997778999988753 32322210 000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEEeecCCCccc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMDKLKPKYENC 428 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f~~~~~~~~~ 428 (506)
.+. ..-......+..+|+.+.. +++.++..++++++.+.|++. |.+. + .++.|.+....
T Consensus 298 -----~t~-~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~--- 365 (420)
T 2pb2_A 298 -----STY-GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKY--- 365 (420)
T ss_dssp -----CEE-CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGG---
T ss_pred -----ccc-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCc---
Confidence 011 1111122333444554433 356677788888888888764 3332 2 66677664310
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.....++.+.|.+.|+. +.+. +..++|+++ ...+++++|+++++.|+++.+++.
T Consensus 366 ------------~~~~~~l~~~l~~~Gi~-v~~~---~~~~iRl~~-~~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 366 ------------KGRARDFLYAGAEAGVM-VLNA---GADVMRFAP-SLVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp ------------TTCHHHHHHHHHHTTEE-CEES---STTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------hHHHHHHHHHHHHCCCE-EEeC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 00134567777777864 4332 246899997 456789999999999999887764
No 180
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.77 E-value=1.7e-16 Score=164.66 Aligned_cols=314 Identities=9% Similarity=-0.061 Sum_probs=185.6
Q ss_pred hHHHHHHHHHHHHHHcCCCC-ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPK-SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA 208 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~ 208 (506)
......++.++++++++... + ..++++||++|+..++.+++... . ++.+|++....|.+...++
T Consensus 84 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~--~------~~~vi~~~~~yhg~~~~~~ 148 (439)
T 3dxv_A 84 SNAPAVTLAERLLASFPGEGTH-------KIWFGHSGSDANEAAYRAIVKAT--G------RSGVIAFAGAYHGCTVGSM 148 (439)
T ss_dssp EEHHHHHHHHHHHHTTTCTTTE-------EEEEESSHHHHHHHHHHHHHHHH--S------CCEEEEETTCCCCSSHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh--C------CCEEEEECCCCCCCcHHHH
Confidence 45667778899999986543 2 68999999999999999886531 0 4456666767777666665
Q ss_pred HHhCCCC--C---------CeEEEecCCCCCccc-----CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----h
Q 048643 209 QIVGIDL--K---------NFRAIKTTKSSSYGL-----SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----L 268 (506)
Q Consensus 209 ~~~G~g~--~---------~v~~v~~~~~~~~~~-----d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l 268 (506)
...|... - .+..+|.+. .+.. |+++|+++|++. ....+.+|++....+++|.+.| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l 224 (439)
T 3dxv_A 149 AFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFL 224 (439)
T ss_dssp CC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHH
T ss_pred hhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHH
Confidence 5444311 0 023344432 1122 799999998521 1223567777777888899988 9
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccC
Q 048643 269 KPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLK 348 (506)
Q Consensus 269 ~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 348 (506)
++|+++|++||+++++|++|+++............++ ..|.++ +.|.++..+..|+++.+.. +.+.+... ..
T Consensus 225 ~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~s--~sK~~~~G~riG~~~~~~~--~~~~~~~~---~~ 296 (439)
T 3dxv_A 225 RKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDILV--LGKGLGGGLPLSAVIAPAE--ILDCASAF---AM 296 (439)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEEE--ECGGGGTTSCCEEEEEEHH--HHTSCSSS---SC
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEEE--EcchhcCCcceEEEEECHH--HHhhhcCC---Cc
Confidence 9999999999999999999986422111111111122 356664 4699987677888877542 22222110 00
Q ss_pred CccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---c--ceEEE
Q 048643 349 NKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS---P--SAVMD 419 (506)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~---p--~~v~f 419 (506)
..+- ...+...+++..+..-.-.+++++..++.+++++.|.+ .+.+. + .++.+
T Consensus 297 -----------------~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~ 358 (439)
T 3dxv_A 297 -----------------QTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGM 358 (439)
T ss_dssp -----------------CTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEE
T ss_pred -----------------CCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEE
Confidence 0111 13344444443332111134555666666676666654 44443 2 56666
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.+....... .+ . .....++.+.+.++|+.+ .+.. ....++|+++ +...++++|+++++.|+++.+++.
T Consensus 359 ~~~~~~~~~----~~-~----~~~~~~~~~~l~~~Gv~v-~~~~-~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 359 ELVCDRQSR----EP-A----RAETAKLIYRAYQLGLVV-YYVG-MNGNVLEFTP-PLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EEEEETTTT----EE-C----HHHHHHHHHHHHHHTEEC-EEES-TTSCEEEECC-CTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEecCcccc----CC-C----HHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 553210000 00 0 223456777777778744 3332 2236899987 466788899999999999987764
Q ss_pred c
Q 048643 500 T 500 (506)
Q Consensus 500 ~ 500 (506)
+
T Consensus 427 ~ 427 (439)
T 3dxv_A 427 A 427 (439)
T ss_dssp G
T ss_pred c
Confidence 3
No 181
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.77 E-value=8.5e-18 Score=173.03 Aligned_cols=282 Identities=12% Similarity=0.081 Sum_probs=185.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+ .+++++|.+ ..++++||++|+..++.+... ++..|+++...|.+..
T Consensus 80 ~~p~~~~le~----~lA~l~g~~---------~~i~~ssGt~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~ 135 (415)
T 2fq6_A 80 GTLTHFSLQQ----AMCELEGGA---------GCVLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYEPSQ 135 (415)
T ss_dssp CCHHHHHHHH----HHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTSCHHHH
T ss_pred CCchHHHHHH----HHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence 4565566665 567777764 357778899999877765322 5567888889998877
Q ss_pred HHH----HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHH--hC
Q 048643 206 KAA----QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQ--FG 279 (506)
Q Consensus 206 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~--~g 279 (506)
..+ +..|+ +++.++.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|++ ||
T Consensus 136 ~~~~~~l~~~G~---~v~~v~~~-------d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~la~~~~~g 199 (415)
T 2fq6_A 136 DFCSKILSKLGV---TTSWFDPL-------IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVAAVRSVVPD 199 (415)
T ss_dssp HHHHHTGGGGTC---EEEEECTT-------CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHHHHHhhcCC
Confidence 655 34577 88888743 788999888754 3478889999999999999999999999 99
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 280 IWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 280 ~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
+++|||++|+.+....+ .. -++|.++.++||+++.+.+ .|+++.++. .+ ..+......
T Consensus 200 ~~livD~a~a~~~~~~p-~~------~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~-~~l~~~~~~----------- 259 (415)
T 2fq6_A 200 AIIMIDNTWAAGVLFKA-LD------FGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CW-EQLRENAYL----------- 259 (415)
T ss_dssp CEEEEECTTTTTTSSCG-GG------GTCSEEEEETTTTTTCSSSCCCEEEEECTT-TH-HHHHHHHHH-----------
T ss_pred CEEEEECCCcccccCCc-cc------cCCeEEEEeCccccCCCCCceEEEEEeCHH-HH-HHHHHHHHh-----------
Confidence 99999999986543222 11 1689999999999998764 677776653 22 222110000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----------------------c
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----------------------P 414 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----------------------p 414 (506)
.+-.......|..++. .+.+..++++..+++.++++.|++.|.++ +
T Consensus 260 ---------~G~~~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g 328 (415)
T 2fq6_A 260 ---------MGQMVDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSS 328 (415)
T ss_dssp ---------TTCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCC
T ss_pred ---------cCCCCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCc
Confidence 0001123445655553 45677778888889999999998764321 1
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhc------CcE--EEe---e---ee-----ECC--EEEEEEE
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINAS------GKA--YMT---H---AV-----CGG--IYAMRFA 473 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~--~~~---~---~~-----~~g--~~~lR~~ 473 (506)
++++|.+.+.. + .....++.+.+... |.+ .+. + +. ..| ...+|++
T Consensus 329 ~i~sf~l~g~~----------~----~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS 394 (415)
T 2fq6_A 329 GLFSFVLKKKL----------N----NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLH 394 (415)
T ss_dssp SEEEEEESSCC----------C----HHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEE
T ss_pred eEEEEEECCCC----------C----HHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEE
Confidence 56788775410 0 11234455544211 210 111 1 00 012 3689999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q 048643 474 VGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 474 ~~~~~tt~edi~~li~~l~~ 493 (506)
+. ..+++++|+.+.++|++
T Consensus 395 ~G-~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 395 IG-LEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CC-SSCHHHHHHHHHHHHHT
T ss_pred ec-CCCHHHHHHHHHHHHHh
Confidence 95 67788899999988864
No 182
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.77 E-value=2.6e-16 Score=163.77 Aligned_cols=356 Identities=11% Similarity=0.010 Sum_probs=209.5
Q ss_pred CHHHHHHHHHHHhcCCCCCCCCCCccccCCCCCCHHHHHHHHHHhhc---CCCCcccccChhhHHHHHHHHHHHHHHcCC
Q 048643 71 SMETILQDVQEHIVPGVTHWQSPNYFAYFPSSGSIAGFLGEMLSSGF---NVVGFNWISSPAATELENIVMDWLGQMLKL 147 (506)
Q Consensus 71 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~p~~~~lE~~~~~~la~l~g~ 147 (506)
+.-.+.+.+...-.+...+.....|+.+-......++ +.+...... +.....|...++..++.+.+.+|+ +|.
T Consensus 35 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a-v~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~ 110 (448)
T 3meb_A 35 AILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPA-VKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGK 110 (448)
T ss_dssp TTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHH-HHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCT
T ss_pred hHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHH-HHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCC
Confidence 3455666665543333333333444444333333333 333322222 122334555556677877777776 365
Q ss_pred CCccccCCCCcEEE--cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH----HhCCCCCCeEEE
Q 048643 148 PKSFLFSGNGGGVI--QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ----IVGIDLKNFRAI 221 (506)
Q Consensus 148 ~~~~~~~~~~~g~~--t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~----~~G~g~~~v~~v 221 (506)
+... ......++ |+|||+|+..++...... . ++..|+++..+|.++...++ ..|. +++.+
T Consensus 111 ~~~~--~~~~~i~~~~t~ggt~al~l~~~~~~~~--~-------~gd~Vlv~~p~~~~~~~~~~~~~~~~G~---~v~~~ 176 (448)
T 3meb_A 111 DSKA--AQEGRIASCQSLSGTGSLHIGFEFLHLW--M-------PKAEFYMPSTTWPNHYGIYDKVFNKLKV---PYKEY 176 (448)
T ss_dssp TCHH--HHTTCEEEEEESHHHHHHHHHHHHHHHH--C-------TTCCEEEESSCCTHHHHHHHHHHCTTTS---CCEEE
T ss_pred Cccc--cCcCcEEEEECCcHHHHHHHHHHHHHHh--C-------CCCEEEECCCCCHhHHHHHHhhHHhCCC---eEEEE
Confidence 5100 00026788 999999997643322211 1 45678888999999999999 8899 99999
Q ss_pred ec-CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHHhCCEEEeecccccccccCc-
Q 048643 222 KT-TKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP- 296 (506)
Q Consensus 222 ~~-~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~- 296 (506)
|. ++++++.+|+++|++++++. .....+|+.+.++|+||.+-+ +++|+++|++||+++++|.+|+++..-..
T Consensus 177 ~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~ 253 (448)
T 3meb_A 177 TYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFE 253 (448)
T ss_dssp CCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHH
T ss_pred eccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcc
Confidence 98 54214899999999999762 112457788889999999865 66699999999999999999987543210
Q ss_pred ----cchhhhcCCCCCCeeEEcCccccCCC-CcceEE--EE--------eCch---hHHhhhcCCccccCCccccCCCcc
Q 048643 297 ----EFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCL--WV--------KDPS---ALVSSLSTNPEYLKNKATESKQVV 358 (506)
Q Consensus 297 ----~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~--~~--------r~~~---~l~~~~~~~~~yl~~~~~~~~~~~ 358 (506)
..+.... ...-..++.++||.++.| ..+|++ ++ .++. .+...+.....+..
T Consensus 254 ~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---------- 322 (448)
T 3meb_A 254 ADAFAVRMFVD-AGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTW---------- 322 (448)
T ss_dssp HHTHHHHHHHH-TTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTT----------
T ss_pred cCchhHHHHhh-cCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhccc----------
Confidence 0111111 112224577899999854 557877 45 3331 11111110000000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhch--------hHHHHHHHHHHHHHHHHHHHHHcC--CC------Cc---c--ceE
Q 048643 359 DYKDWQITLSRRFRSLKLWLVIRNYGV--------ANLRHFLRSHVNMAKLFERLVASD--KR------VS---P--SAV 417 (506)
Q Consensus 359 ~~~~~~~~~sr~~~al~~~~~l~~~G~--------~g~~~~i~~~~~~a~~l~~~l~~~--~~------~~---p--~~v 417 (506)
. ....+..+++...+.. +.++++.++..+++++|.+.|++. ++ ++ | +.+
T Consensus 323 -------~---~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~ 392 (448)
T 3meb_A 323 -------S---MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMF 392 (448)
T ss_dssp -------S---SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSE
T ss_pred -------C---CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEE
Confidence 0 0122333444433322 346778888899999999999887 56 65 4 444
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESI-NASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+|.-.+ .++...+ .+.|+ ++.++. .|++++. . ++++|++++++|.++.+
T Consensus 393 ~~~~~~---------------------~~~~~~ll~~~gV-~v~~G~------gRis~a~-~-~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 393 TFTGLT---------------------PEHVDYLKEKWSI-YLVKAG------GRMSMCG-L-TESNCDYVAEAIHDAVT 442 (448)
T ss_dssp EECCCC---------------------HHHHHHHHHHHCE-EECSGG------GEEEGGG-C-CTTTHHHHHHHHHHHHH
T ss_pred EecCCC---------------------HHHHHHHHHhCCE-EEeCCC------cEEEEec-C-CHHHHHHHHHHHHHHHH
Confidence 442111 1223333 34565 455432 2999853 2 44479999999999877
Q ss_pred HH
Q 048643 497 AF 498 (506)
Q Consensus 497 ~l 498 (506)
++
T Consensus 443 ~~ 444 (448)
T 3meb_A 443 KL 444 (448)
T ss_dssp HS
T ss_pred hc
Confidence 43
No 183
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.76 E-value=2.1e-16 Score=161.48 Aligned_cols=296 Identities=12% Similarity=0.029 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.+|+++++|. + ..++++||++|+..++.+++...... |.. ++.+|+.+...|.+...+...
T Consensus 77 ~~~~~~l~~~la~~~~~--~-------~v~~~~gg~ea~~~al~~~~~~~~~~-g~~--~~~vi~~~~~yhg~~~~~~~~ 144 (395)
T 3nx3_A 77 NENIAAAAKNLAKASAL--E-------RVFFTNSGTESIEGAMKTARKYAFNK-GVK--GGQFIAFKHSFHGRTLGALSL 144 (395)
T ss_dssp CHHHHHHHHHHHHHHTC--S-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCEEEEETTCCCCSSHHHHTT
T ss_pred CHHHHHHHHHHHHhcCC--C-------eEEEeCCHHHHHHHHHHHHHHHhhcc-CCC--CCEEEEEcCCcCCCCHHHHhh
Confidence 44556677888888873 2 68999999999999999887653221 110 234444454555444333322
Q ss_pred hCC---------CCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHH
Q 048643 211 VGI---------DLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQ 277 (506)
Q Consensus 211 ~G~---------g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~ 277 (506)
.+. -..++..+|.+ |+++|++++++. +.+|++....+++|.+.| +++|+++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~ 211 (395)
T 3nx3_A 145 TANEKYQKPFKPLISGVKFAKYN-------DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCDE 211 (395)
T ss_dssp CCCHHHHGGGCSCCSCEEEECTT-------CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCCCcEEeCCC-------CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 220 01255666532 799999988643 346777777788898877 9999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
||+++|+|++|.++......+.....++ ..|.++++ |.++.++++|++++++. .+.+.+... ...
T Consensus 212 ~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~~~~~~-~~~~~~~~~---~~~-------- 276 (395)
T 3nx3_A 212 KDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAFVINQK-VASNSLEAG---DHG-------- 276 (395)
T ss_dssp HTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEEEECHH-HHHHHSCTT---CCS--------
T ss_pred cCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEEEEchh-hhhhhcCCc---ccC--------
Confidence 9999999999976532211111111222 46777654 88887788998887653 212333210 000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH----cCCCCc---c--ceEEEeecCCCccc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVA----SDKRVS---P--SAVMDKLKPKYENC 428 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~---p--~~v~f~~~~~~~~~ 428 (506)
.+-....+...+++..+..-.-++++++..++.+++++.|. +.|.+. + +++.|.+....
T Consensus 277 ---------~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~--- 344 (395)
T 3nx3_A 277 ---------STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSV--- 344 (395)
T ss_dssp ---------SCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS---
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcc---
Confidence 00011233333333333210112344455555555555554 345444 2 66777764420
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 429 HSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
...++.+.+.++|+.+ .+. +..++|+++ +..+++++|+++++.|+++.++
T Consensus 345 --------------~~~~~~~~l~~~Gi~v-~~~---~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 345 --------------KVAKVIQKCQENALLL-ISC---GENDLRFLP-PLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp --------------CHHHHHHHHHHTTEEC-EEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred --------------hHHHHHHHHHHCCCEE-ecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 1345677777888743 332 356899987 4677889999999999988653
No 184
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.76 E-value=8.8e-17 Score=161.46 Aligned_cols=274 Identities=9% Similarity=-0.046 Sum_probs=183.7
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCC
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDL 215 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~ 215 (506)
++.+++++++|.+.+ ..++|+|+++++..++.+.. +..|+++..+|.++..+++..|.
T Consensus 54 ~lr~~la~~~~~~~~-------~i~~t~g~~~al~~~~~~l~-------------gd~Vi~~~p~~~~~~~~~~~~g~-- 111 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN-------AILVTNGPTAAFYQIAQAFR-------------GSRSLIAIPSFAEYEDACRMYEH-- 111 (350)
T ss_dssp HHHHHHHHHTTCCGG-------GEEEESHHHHHHHHHHHHTT-------------TCEEEEEESCCHHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHHC-------------CCEEEEeCCCcHHHHHHHHHcCC--
Confidence 455778888888765 78999999999887766543 23577788999999999999999
Q ss_pred CCeEEEec-CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC-CEEEeecccccccc
Q 048643 216 KNFRAIKT-TKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG-IWVHVDAAYAGSAC 293 (506)
Q Consensus 216 ~~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g-~~lhVDaA~gg~~~ 293 (506)
+++.+|+ ++. ..+++ + .+.+|+++.++|+||.+-|+++|.++|+.++ .++++|++|+.+..
T Consensus 112 -~~~~v~~~~~~--~~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~ 174 (350)
T 3fkd_A 112 -EVCFYPSNEDI--GEADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT 174 (350)
T ss_dssp -EEEEEETTSCG--GGSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS
T ss_pred -eEEEEecCCcc--ccCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc
Confidence 9999998 642 24554 1 2347788999999999999999999999886 79999999976432
Q ss_pred cCccchhhhcCCCCCCeeEEcCccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCC
Q 048643 294 ICPEFQHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 372 (506)
Q Consensus 294 ~~~~~~~~~~gi~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 372 (506)
........+. ....+.+..+++|+++ ....+|++++ ++... +.+...... + ...
T Consensus 175 ~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~-~~~~~~~~~----------------~------~~~ 229 (350)
T 3fkd_A 175 EEVIRPADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFM-KRVAAFSTP----------------W------AVN 229 (350)
T ss_dssp SCCCCGGGGT-TCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHH-HHHHTTCCT----------------T------CSC
T ss_pred CcchhhHHhh-cCCCEEEEecCchhccCcchheEeEEe-CHHHH-HHHHHhCCC----------------C------CCC
Confidence 2111111111 1234467778999998 4467888887 44433 333211000 0 012
Q ss_pred chHHHHHHHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHHHHHHHH
Q 048643 373 SLKLWLVIRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRE 446 (506)
Q Consensus 373 al~~~~~l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (506)
.+..+++...+.... +.+.+++..++++++.+.|+++|+++ | +.+.+++... ...+
T Consensus 230 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ 291 (350)
T 3fkd_A 230 ALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRLKKG------------------TAAE 291 (350)
T ss_dssp HHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEECCCSSSEEEEEESSS------------------CHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEECCCCCcEEEEECCCC------------------CHHH
Confidence 344444444442222 33344455588999999999888887 3 6666666432 1346
Q ss_pred HHHHHHh-cCcEEEeee-eEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 447 LLESINA-SGKAYMTHA-VCG--GIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 447 l~~~l~~-~g~~~~~~~-~~~--g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+.+.|.+ .|+. +.+. .+. +..++|+++. +++++++++++|+++.+
T Consensus 292 l~~~L~~~~gi~-v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 292 LKKYMLEEYNML-IRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFLE 340 (350)
T ss_dssp HHHHHHHTTCEE-CEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCEE-EEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence 6777777 6764 4443 222 3578999984 67799999999988754
No 185
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.76 E-value=3.7e-17 Score=168.69 Aligned_cols=309 Identities=10% Similarity=0.006 Sum_probs=186.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHH--HHHHHHHHHHHHhhcccC---CCCeEEEeCCC
Q 048643 125 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL--CTLTAARDRVLNKIGREN---ISKLVVYGSDQ 199 (506)
Q Consensus 125 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l--~al~~ar~~~~~~~~~~~---~~~~~v~~s~~ 199 (506)
...++..++++. ++++++.+.+ ..++|+|+++++. .++.+..... . |... .++..|+++..
T Consensus 67 ~~~~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~--~-g~~~~~~~~gd~Vlv~~p 132 (423)
T 3ez1_A 67 GGVAGLPSARAL----FAGYLDVKAE-------NVLVWNNSSLELQGLVLTFALLHGV--R-GSTGPWLSQTPKMIVTVP 132 (423)
T ss_dssp SCTTCCHHHHHH----HHHHTTSCGG-------GEEECSSCHHHHHHHHHHHHHHTCC--T-TCSSCGGGGCCEEEEEES
T ss_pred CCCCChHHHHHH----HHHHhCCChh-------hEEEeCCcHHHHHHHHHHHHHhccC--C-CccccccCCCCEEEEcCC
Confidence 334445566655 5555677654 7899999998886 5555443200 0 0000 00467888899
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-ccCCCCCcccChh---HHHHHH
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT-IGTTAITAVDPLK---PLCDVA 275 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t-~gtt~tG~idpl~---~I~~ia 275 (506)
+|..+...++..|. +++.+|++.+ .+|+++|++++++. ..+.+|+++ .++|+||.+-|.+ +|+++|
T Consensus 133 ~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~~----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a 202 (423)
T 3ez1_A 133 GYDRHFLLLQTLGF---ELLTVDMQSD---GPDVDAVERLAGTD----PSVKGILFVPTYSNPGGETISLEKARRLAGLQ 202 (423)
T ss_dssp CCHHHHHHHHHHTC---EEEEEEEETT---EECHHHHHHHHHSC----TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCC
T ss_pred CcHHHHHHHHHcCC---EEEeccCCCC---CCCHHHHHHHHhhC----CCceEEEECCCCCCCCCcCCCHHHHHHHHHHH
Confidence 99999999999999 9999999852 49999999999621 124456544 7899999997766 888888
Q ss_pred -HHhCCEEEeecccccccccC-c-----cchhhh--cCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 048643 276 -KQFGIWVHVDAAYAGSACIC-P-----EFQHFI--DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 276 -~~~g~~lhVDaA~gg~~~~~-~-----~~~~~~--~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
++||+++++|++|+...+.. . ...... .+....+.+..+++|++.....+|+++.++. .. ..+.....+
T Consensus 203 ~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~-~~-~~~~~~~~~ 280 (423)
T 3ez1_A 203 AAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSED-NI-RWLSKYLGA 280 (423)
T ss_dssp CSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHH-HH-HHHHHHHHH
T ss_pred HhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHH-HH-HHHHHHHhh
Confidence 99999999999997432221 1 111110 0122455778889999777788898777542 22 222110000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch------hHHHHHHHHHHHHHH----HHHHHHHcCC-CCc--
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV------ANLRHFLRSHVNMAK----LFERLVASDK-RVS-- 413 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~------~g~~~~i~~~~~~a~----~l~~~l~~~~-~~~-- 413 (506)
. +.....+..+++...+.. +.+++..+...+..+ .|.+.+.+.+ +++
T Consensus 281 ~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 340 (423)
T 3ez1_A 281 Q--------------------SIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWT 340 (423)
T ss_dssp S--------------------CSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEEC
T ss_pred h--------------------ccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEe
Confidence 0 001122333333333322 223333333333444 4444444453 344
Q ss_pred -c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEee-ee-E-----CCEEEEEEEecCCCCCHH
Q 048643 414 -P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH-AV-C-----GGIYAMRFAVGATLTEER 482 (506)
Q Consensus 414 -p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~-~-----~g~~~lR~~~~~~~tt~e 482 (506)
| ..+.+++.... ...+.+.+.+.|+. +.+ .. + .+..++|+++.. . +++
T Consensus 341 ~p~~g~~~~~~~~~~~------------------~~~~~~~l~~~gv~-v~~~g~~~~~~~~~~~~~iRis~~~-~-~~~ 399 (423)
T 3ez1_A 341 LPKGGYFISLDTAEPV------------------ADRVVKLAEAAGVS-LTPAGATYPAGQDPHNRNLRLAPTR-P-PVE 399 (423)
T ss_dssp CCSBSSCEEEEESSSC------------------HHHHHHHHHHTTEE-CCCTTTTSSTTCCSSSCEEEECCSS-S-CHH
T ss_pred CCCccEEEEEECCCCc------------------HHHHHHHHHHCCcE-EecCcccccCCCCCCCCeEEEEcCC-C-CHH
Confidence 4 55666664320 24566667777864 443 21 1 246789999943 3 788
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 048643 483 HVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 483 di~~li~~l~~~~~~l~~ 500 (506)
+|+++++.|.++.+++..
T Consensus 400 ~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 400 EVRTAMQVVAACIRLATE 417 (423)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998877653
No 186
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.76 E-value=4.6e-17 Score=168.26 Aligned_cols=311 Identities=11% Similarity=-0.027 Sum_probs=188.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHH--HHHHHHHHHHHHhh---cccCCCCeEEEeC
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL--CTLTAARDRVLNKI---GRENISKLVVYGS 197 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l--~al~~ar~~~~~~~---~~~~~~~~~v~~s 197 (506)
.|....+..++++.+.+| ++++.+ ..++|+|+++++. .++.+..+.. .. .+...++..|+++
T Consensus 73 ~Y~~~~g~~~lr~~ia~~----~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~--~g~~~~~~~~~gd~V~v~ 139 (427)
T 3ppl_A 73 NYGGLDGIVDIRQIWADL----LGVPVE-------QVLAGDASSLNIMFDVISWSYIFGN--NDSVQPWSKEETVKWICP 139 (427)
T ss_dssp SSCCSSCCHHHHHHHHHH----HTSCGG-------GEEECSSCHHHHHHHHHHHHHHHCC--TTCSSCGGGSSCCEEEEE
T ss_pred CCCCCCCcHHHHHHHHHH----hCCCcc-------eEEEeCCcHHHHHHHHHHHHHhccC--CcccccccCCCCCEEEEc
Confidence 343334456666655554 477654 7899999998884 4444433200 00 0000015678889
Q ss_pred CCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-ccCCCCCcccChh---HHHH
Q 048643 198 DQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCAT-IGTTAITAVDPLK---PLCD 273 (506)
Q Consensus 198 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t-~gtt~tG~idpl~---~I~~ 273 (506)
..+|.++...++..|. +++.||+++ + .+|+++|+++++.. .+.+|+++ .++|+||.+-|.+ +|++
T Consensus 140 ~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~ 208 (427)
T 3ppl_A 140 VPGYDRHFSITERFGF---EMISVPMNE--D-GPDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSA 208 (427)
T ss_dssp ESCCHHHHHHHHHTTC---EEEEEEEET--T-EECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHcCC---EEEEeCCCC--C-CCCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 9999999999999999 999999985 3 39999999998421 23456555 7899999997776 8888
Q ss_pred HH-HHhCCEEEeecccccccccCcc-----chhhh--cCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcc
Q 048643 274 VA-KQFGIWVHVDAAYAGSACICPE-----FQHFI--DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 274 ia-~~~g~~lhVDaA~gg~~~~~~~-----~~~~~--~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+| ++||+|+|+|++|+...+.... ..... .+....+.+..+++|++.....+|+++.+. .. ...+.....
T Consensus 209 ~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~-~l-~~~~~~~~~ 286 (427)
T 3ppl_A 209 METAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA-EN-RKWYTGHAG 286 (427)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH-HH-HHHHHHHHH
T ss_pred HHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH-HH-HHHHHHHhh
Confidence 98 9999999999999764332111 11110 112245677888999976678888877653 22 222211000
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch-----hHHHHHHHHHHHHHHHHHHHHHc----CCCCc---
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-----ANLRHFLRSHVNMAKLFERLVAS----DKRVS--- 413 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-----~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--- 413 (506)
+. +.....+..+++...+.. +.++++.+...+..+++.+.|.+ .++++
T Consensus 287 ~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~ 346 (427)
T 3ppl_A 287 IR--------------------GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTV 346 (427)
T ss_dssp HH--------------------CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECC
T ss_pred cc--------------------cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeC
Confidence 00 001122333344443332 23444444455555555555543 33444
Q ss_pred c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-E-----CCEEEEEEEecCCCCCHHHH
Q 048643 414 P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV-C-----GGIYAMRFAVGATLTEERHV 484 (506)
Q Consensus 414 p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~lR~~~~~~~tt~edi 484 (506)
| ..+.+++... ...++.+.+.+.|+.+..... + .+..++|+++.. .++++|
T Consensus 347 p~~g~~~~~~~~~~------------------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~--~~~~~i 406 (427)
T 3ppl_A 347 PAGGYFISLDVVPG------------------TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSL--PPVEEL 406 (427)
T ss_dssp CSBSSCEEEECSTT------------------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS--SCHHHH
T ss_pred CCccEEEEEECCcc------------------hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCC--CCHHHH
Confidence 4 5566665432 024566677777864433121 1 246789999943 378899
Q ss_pred HHHHHHHHHHHHHHH
Q 048643 485 MVAWTMVQEQLEAFL 499 (506)
Q Consensus 485 ~~li~~l~~~~~~l~ 499 (506)
+++++.|.++.+++.
T Consensus 407 ~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 407 EVAMDGVATCVLLAA 421 (427)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887764
No 187
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.76 E-value=2.3e-17 Score=168.48 Aligned_cols=313 Identities=12% Similarity=0.034 Sum_probs=196.7
Q ss_pred HHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCCcEEE--cCCchHHHHHHHHHHHHHHHHh
Q 048643 109 LGEMLSSGFNV-VGFNWISSPAATELENIVMDWLGQMLKL--PKSFLFSGNGGGVI--QGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 109 ~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~--t~ggt~a~l~al~~ar~~~~~~ 183 (506)
+.+.+...+.. ....|...+...++++.+.+|+....+. +.+ ..++ |+||++|+..++.+++.. .
T Consensus 49 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~--~- 118 (396)
T 2q7w_A 49 VKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDK-------RARTAQTPGGTGALRVAADFLAKN--T- 118 (396)
T ss_dssp HHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHH--S-
T ss_pred HHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccc-------cEEEEecccchhhHHHHHHHHHHh--C-
Confidence 34444443322 2334555566788888888887554332 122 5666 999999998887765431 0
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..|++...+|.++...++..|. +++.+|.++.+++.+|+++|++++++. .....+++.+.++|+||
T Consensus 119 ------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG 186 (396)
T 2q7w_A 119 ------SVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPTG 186 (396)
T ss_dssp ------CCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTC
T ss_pred ------CCCEEEEcCCCchhHHHHHHHcCC---ceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCC
Confidence 456677888999999999999999 999999853235789999999998642 11245677899999999
Q ss_pred cccC---hhHHHHHHHHhCCEEEeecccccccccC----ccchhhhcCCCCCCeeEEcCccccCC-CCcceEEEE--eCc
Q 048643 264 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC----PEFQHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWV--KDP 333 (506)
Q Consensus 264 ~idp---l~~I~~ia~~~g~~lhVDaA~gg~~~~~----~~~~~~~~gi~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~ 333 (506)
.+-+ +++|+++|++||+++++|++|+++..-. ...... .....-+.+..+++|+++. ...+|++++ +++
T Consensus 187 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 265 (396)
T 2q7w_A 187 IDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAF-AAMHKELIVASSYSXNFGLYNERVGACTLVAADS 265 (396)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHH-HHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHH-HhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence 9854 6789999999999999999997654310 011111 1111234567789999984 355788886 344
Q ss_pred h---hHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHHHHHHHHHH
Q 048643 334 S---ALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRSHVNMAKLF 402 (506)
Q Consensus 334 ~---~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~~~~~a~~l 402 (506)
+ .+...+.. +... +..+ ...+..+++...+. .+.++++.++..++++++
T Consensus 266 ~~~~~~~~~~~~---~~~~--------------~~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (396)
T 2q7w_A 266 ETVDRAFSQMKA---AIRA--------------NYSN---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF 325 (396)
T ss_dssp HHHHHHHHHHHH---HHHT--------------TTSS---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHhh--------------ccCC---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222110 0000 0000 12233344444432 246677778888999999
Q ss_pred HHHHHcCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEe
Q 048643 403 ERLVASDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAV 474 (506)
Q Consensus 403 ~~~l~~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~ 474 (506)
.+.|++.+ +++ | +++.|. .-. . ..+.+.+.+.|+ ++.+ .+|+++
T Consensus 326 ~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~----------------~---~~~~~~l~~~gv-~v~~-------~~Ris~ 377 (396)
T 2q7w_A 326 VNTLQEKGANRDFSFIIKQNGMFSFS-GLT----------------K---EQVLRLREEFGV-YAVA-------SGRVNV 377 (396)
T ss_dssp HHHHHHTTCCSCCTHHHHCCSSEEEC-CCC----------------H---HHHHHHHHHHCE-ECCT-------TCEEEG
T ss_pred HHHHHhcCCCCCcceecCCCceEEEe-cCC----------------H---HHHHHHHHhcCe-eecC-------CceEEE
Confidence 99999874 366 4 444442 111 1 234444555676 4443 269998
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 048643 475 GATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 475 ~~~~tt~edi~~li~~l~~~ 494 (506)
.. .++++|+++++.|+++
T Consensus 378 ~~--~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 378 AG--MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp GG--CCTTTHHHHHHHHHHH
T ss_pred ee--cCHHHHHHHHHHHHhc
Confidence 63 3677999999998864
No 188
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.75 E-value=5.4e-16 Score=159.93 Aligned_cols=294 Identities=11% Similarity=-0.011 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHcCCC-CccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 133 LENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 133 lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
...++.+.+++.+|.+ .+ ..++++||++|+..++.+++... ++.+|+.....|.+...++...
T Consensus 87 ~~~~l~~~la~~~~~~~~~-------~v~~~~gg~ea~~~ai~~~~~~~---------~~~vi~~~p~yh~~~~~~~~~~ 150 (419)
T 2eo5_A 87 PQLELAKKLVTYSPGNFQK-------KVFFSNSGTEAIEASIKVVKNTG---------RKYIIAFLGGFHGRTFGSISLT 150 (419)
T ss_dssp HHHHHHHHHHHHSSCSSCE-------EEEEESSHHHHHHHHHHHHHTTS---------CCEEEEETTCCCCSSHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCcCC-------EEEEeCchHHHHHHHHHHHHHhh---------CCcEEEECCCcCCCCHhhHhhc
Confidence 3455667888999876 33 68999999999999998876420 2334444545665666555543
Q ss_pred CC--------C--CCCeEEEecCCCCCcc----------------cCHHHHH-HHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 212 GI--------D--LKNFRAIKTTKSSSYG----------------LSPDSLL-TQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 212 G~--------g--~~~v~~v~~~~~~~~~----------------~d~~~L~-~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
|. + ...++.+|.+. +++ +|+++|+ +++++.. ....+.+|+++..++++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG~ 227 (419)
T 2eo5_A 151 ASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGGY 227 (419)
T ss_dssp CSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTTS
T ss_pred CCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCCC
Confidence 32 1 12678888753 222 4788999 8887420 0012345555544556897
Q ss_pred ccC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhh
Q 048643 265 VDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSS 339 (506)
Q Consensus 265 idp----l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 339 (506)
+-| +++|+++|++||+++|+|++|.++............++ ..|.++ +.|.++.+ .++|+++.++.- . .
T Consensus 228 ~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~~riG~~~~~~~~--~-~ 301 (419)
T 2eo5_A 228 VIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVIT--LAKALGGGIMPIGATIFRKDL--D-F 301 (419)
T ss_dssp BCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTTSCCEEEEEEGGG--C-C
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEE--ecccccCCccceEEEEEchHh--h-c
Confidence 655 99999999999999999999986532211111111122 456665 45988877 889999887531 1 2
Q ss_pred hcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--
Q 048643 340 LSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P-- 414 (506)
Q Consensus 340 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-- 414 (506)
+. .... .+-....+...+++..+. .+.++.++..++.++|.+.|++. +. +
T Consensus 302 ~~---~~~~------------------~t~~~n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~g 356 (419)
T 2eo5_A 302 KP---GMHS------------------NTFGGNALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQGL--ADDVRGIG 356 (419)
T ss_dssp C---------------------------CCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS--SSEEEEET
T ss_pred CC---cccC------------------CCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh--hhheEeee
Confidence 21 0000 000112333333333331 12236778888999999999876 43 3
Q ss_pred ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 415 SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 415 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+++.+.+.+. ..... +.+.|.+.|+. +.+. +..++|+++ +..+++++++++++.|+++
T Consensus 357 ~~~~i~~~~~----------------~~~~~-~~~~l~~~Gv~-v~~~---~~~~lRis~-~~~~t~e~i~~~l~~l~~~ 414 (419)
T 2eo5_A 357 LAWGLEYNEK----------------KVRDR-IIGESFKRGLL-LLPA---GRSAIRVIP-PLVISEEEAKQGLDILKKV 414 (419)
T ss_dssp TEEEEECSCH----------------HHHHH-HHHHHHHTTEE-CEEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEecC----------------ccHHH-HHHHHHHCCCE-EecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHH
Confidence 6666765331 11234 77777777864 4432 245899987 5667899999999999998
Q ss_pred HHHH
Q 048643 495 LEAF 498 (506)
Q Consensus 495 ~~~l 498 (506)
.+++
T Consensus 415 l~~~ 418 (419)
T 2eo5_A 415 IKVV 418 (419)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7653
No 189
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.75 E-value=1.6e-17 Score=170.07 Aligned_cols=276 Identities=14% Similarity=0.101 Sum_probs=177.2
Q ss_pred HHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH----HHH
Q 048643 135 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA----AQI 210 (506)
Q Consensus 135 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka----~~~ 210 (506)
.++.+.+++++|.+ ..+++++|++|+..++. ... ++..|+++...|.+.... ++.
T Consensus 58 ~~lr~~la~~~g~~---------~~i~~~sGt~a~~~al~-~~~-----------~gd~Vi~~~~~y~~~~~~~~~~~~~ 116 (393)
T 1n8p_A 58 ENLERAVAALENAQ---------YGLAFSSGSATTATILQ-SLP-----------QGSHAVSIGDVYGGTHRYFTKVANA 116 (393)
T ss_dssp HHHHHHHHHHTTCS---------EEEEESCHHHHHHHHHH-TSC-----------SSCEEEEESSCCHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhCCC---------cEEEECChHHHHHHHHH-HcC-----------CCCEEEEeCCCchHHHHHHHHHHHH
Confidence 34456678888875 24666667999987776 321 455677777888865553 445
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh----CCEEEeec
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF----GIWVHVDA 286 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~----g~~lhVDa 286 (506)
.|+ +++.+|.+ | ++|+++|++. +.+|+++.++|++|.+.|+++|+++|++| |+++|+|+
T Consensus 117 ~G~---~v~~v~~~-------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~ 179 (393)
T 1n8p_A 117 HGV---ETSFTNDL-------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDN 179 (393)
T ss_dssp TCS---CCEEESSH-------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEEC
T ss_pred cCc---EEEEeCCC-------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeC
Confidence 677 88888863 6 7888887643 45788899999999999999999999999 99999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cc-eEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcc
Q 048643 287 AYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DC-CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 287 A~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
+|+.+... + ... + ++|.++.++||+++.+. .. |+++++++.... .+......
T Consensus 180 a~~~~~~~-~-~~~----~-~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~-~l~~~~~~------------------ 233 (393)
T 1n8p_A 180 TFLSPYIS-N-PLN----F-GADIVVHSATKYINGHSDVVLGVLATNNKPLYE-RLQFLQNA------------------ 233 (393)
T ss_dssp TTTHHHHC-C-GGG----G-TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHHHH------------------
T ss_pred CccccccC-C-HHH----c-CCeEEEEECcccccCCCCceeEEEEeCCHHHHH-HHHHHHHh------------------
Confidence 99877643 1 111 1 68999999999998553 14 777776554332 22110000
Q ss_pred ccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC-Cc----c---------------------ceEE
Q 048643 365 ITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR-VS----P---------------------SAVM 418 (506)
Q Consensus 365 ~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~-~~----p---------------------~~v~ 418 (506)
.+.....+..|..++.+ +.+...+++..++++++.+.|++.+. +. | ++++
T Consensus 234 --~g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~ 309 (393)
T 1n8p_A 234 --IGAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMIS 309 (393)
T ss_dssp --HCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEE
T ss_pred --cCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEE
Confidence 01112334555555443 44666777778888888888877654 21 1 2455
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE---------EEee--eeE----------CC--EEEEEEEec
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA---------YMTH--AVC----------GG--IYAMRFAVG 475 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---------~~~~--~~~----------~g--~~~lR~~~~ 475 (506)
|.+.+. .....++.+.+...++. ...+ ..+ .| ...+|+++.
T Consensus 310 ~~l~~~----------------~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g 373 (393)
T 1n8p_A 310 FRIKGG----------------AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVG 373 (393)
T ss_dssp EEESSC----------------HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECC
T ss_pred EEeCCc----------------HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEc
Confidence 655432 12234555555322211 0100 000 12 368999994
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 048643 476 ATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 476 ~~~tt~edi~~li~~l~~~~ 495 (506)
..+++++|+.+.++|+++.
T Consensus 374 -~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 374 -IEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp -SSCHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHhh
Confidence 6788889999999988753
No 190
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.75 E-value=2.2e-17 Score=167.88 Aligned_cols=294 Identities=15% Similarity=0.088 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC---CchHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ---THCALQKA 207 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~---~H~s~~ka 207 (506)
..+|+++.+++++++|.++. ...++++||++|+..++.+. . + ..|+++.. .|+++.++
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~------~~~~~~~ggt~a~~~~~~~~--~----------g-d~Vl~~~~~y~~~~~~~~~ 117 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEN------DKCVGFNRTSSAILATILAL--K----------P-KKVIHYLPELPGHPSIERS 117 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTT------EEEEEESSHHHHHHHHHHHH--C----------C-SEEEEECSSSSCCTHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCc------ceEEEEcChHHHHHHHHHhC--C----------C-CEEEEecCCCCccHHHHHH
Confidence 45677888888999998421 15799999999998887754 1 3 34556666 56776678
Q ss_pred HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE-EEEeccCCCCC-cccChhHHHHHHHHhCCEEEee
Q 048643 208 AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLF-LCATIGTTAIT-AVDPLKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 208 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~-Vv~t~gtt~tG-~idpl~~I~~ia~~~g~~lhVD 285 (506)
++..|. +++.+ +|+++|+++ ++ .+.+ |+++.+++++| ...|+++|+++|++||+++|+|
T Consensus 118 ~~~~g~---~~~~v---------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~D 178 (374)
T 2aeu_A 118 CKIVNA---KYFES---------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVD 178 (374)
T ss_dssp HHHTTC---EEEEE---------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHcCc---EEEEe---------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEE
Confidence 888898 78777 278888776 32 2456 77888999999 8999999999999999999999
Q ss_pred cccccccccCccchh-hhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCcc
Q 048643 286 AAYAGSACICPEFQH-FIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQ 364 (506)
Q Consensus 286 aA~gg~~~~~~~~~~-~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 364 (506)
++|+.+.. .+.... ... ..+|.++.++||++..| .+|+++.++ +.. +.+.....+. +
T Consensus 179 e~~~~~~~-~~~~~~~~~~--~~~di~~~S~sK~l~g~-~~G~~~~~~-~~~-~~l~~~~~~~----------------~ 236 (374)
T 2aeu_A 179 DASGARVR-LLFNQPPALK--LGADLVVTSTDKLMEGP-RGGLLAGKK-ELV-DKIYIEGTKF----------------G 236 (374)
T ss_dssp CTTHHHHH-HHTTCCCHHH--HTCSEEEEETTSSSSSC-SCEEEEEEH-HHH-HHHHHHHHTT----------------T
T ss_pred CCcccccc-cccccCCccc--cCCcEEEecCcccccCc-ceEEEEECH-HHH-HHHHHhhccc----------------c
Confidence 99976541 011000 111 15789999999998764 788887764 222 2221100000 0
Q ss_pred ccCCCCCCchHHH---HHHHHhchhHHHHHHHHHHHH----HHHHHHHHHcC---CCCc----c-ceEEEeecCCCcccc
Q 048643 365 ITLSRRFRSLKLW---LVIRNYGVANLRHFLRSHVNM----AKLFERLVASD---KRVS----P-SAVMDKLKPKYENCH 429 (506)
Q Consensus 365 ~~~sr~~~al~~~---~~l~~~G~~g~~~~i~~~~~~----a~~l~~~l~~~---~~~~----p-~~v~f~~~~~~~~~~ 429 (506)
.....+..+ .++..+..+.+++..++...+ .+.+.+.|... +++. | +.+.++....
T Consensus 237 ----~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~----- 307 (374)
T 2aeu_A 237 ----LEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKD----- 307 (374)
T ss_dssp ----CBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESS-----
T ss_pred ----CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeeccc-----
Confidence 011222333 333333222333333333333 34455555443 2343 3 4433333221
Q ss_pred cccccchHHHHHHHHHHHHH-HHHhcCcEEEeeee-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 430 SQQLVTEEEAINEFNRELLE-SINASGKAYMTHAV-CGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~-~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
....... ..++.. .+.+.|+.+..+.. ..+..++|++++.....+++++++.++|++..+++.+
T Consensus 308 ------~~~~~~~-~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 308 ------DTINIKK-LIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp ------HHHHHHH-HHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred ------ccccccc-hHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 0000001 122333 33456764433222 2345689999976566666799999999998887754
No 191
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.75 E-value=1.4e-17 Score=173.86 Aligned_cols=158 Identities=16% Similarity=0.170 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHH----H
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKA----A 208 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka----~ 208 (506)
...++.+|+++++|.+ ..+++++|++|+..++. . ++ ++..|+++...|.++... +
T Consensus 134 ~~~~l~~~la~~~g~~---------~~i~~~sGt~al~~~l~-~----~~-------~Gd~Vi~~~~~y~~~~~~~~~~~ 192 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD---------RAFCFTSGMAALSAVTH-L----IK-------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_dssp HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHT-T----SC-------TTCEEEEESSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHH-H----hC-------CCCEEEEECCCchhHHHHHHHHH
Confidence 5667889999999875 35777888887754442 1 11 556778888899887754 4
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+..|. +++.+|.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|++||+++++|++|
T Consensus 193 ~~~G~---~v~~v~~~-------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~ 256 (464)
T 1ibj_A 193 PRSGV---VVKRVNTT-------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSI 256 (464)
T ss_dssp GGGTC---EEEEECTT-------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTT
T ss_pred HHcCC---EEEEeCCC-------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCC
Confidence 56687 88888753 789999988643 458889999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEcCccccCCCCcc--eEEEEeCch
Q 048643 289 AGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDC--CCLWVKDPS 334 (506)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~ 334 (506)
+.+....+. . . ++|.++.++||+++.|.|+ |+++++++.
T Consensus 257 ~~g~~~~~~-~-----~-~~div~~S~sK~~~g~~Gl~~G~l~~~~~~ 297 (464)
T 1ibj_A 257 MSPVLSRPL-E-----L-GADIVMHSATKFIAGHSDVMAGVLAVKGEK 297 (464)
T ss_dssp TCTTTCCGG-G-----T-TCSEEEEETTTTTTCSSCCCCEEEEECSHH
T ss_pred cccccCChh-h-----c-CCEEEEECCcccccCCCCCcEEEEEEChHH
Confidence 765432221 1 1 6899999999999988765 888887644
No 192
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.75 E-value=3.8e-16 Score=161.81 Aligned_cols=299 Identities=9% Similarity=-0.015 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCC-CeEEEeCCCCchHHHHHHHH
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENIS-KLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~-~~~v~~s~~~H~s~~ka~~~ 210 (506)
....++.+.+++++|.+ ..++++|||+||..++.+++.......|.. .+ +.+|+.....|.+...++..
T Consensus 107 ~~~~~l~~~la~~~g~~---------~v~~~~sGseA~~~al~~a~~~~~~~~g~~-~gr~~vi~~~~~yhg~~~~~~~~ 176 (433)
T 1z7d_A 107 VPLGICERYLTNLLGYD---------KVLMMNTGAEANETAYKLCRKWGYEVKKIP-ENMAKIVVCKNNFSGRTLGCISA 176 (433)
T ss_dssp HHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTC-----------
T ss_pred HHHHHHHHHHHhhcCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhccCCC-CCCCeEEEEeCCcCCcchhhhcc
Confidence 34445556677777742 679999999999999998875322111111 02 33444444556665555555
Q ss_pred hCC-------CC--CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc----ChhHHHHHHHH
Q 048643 211 VGI-------DL--KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD----PLKPLCDVAKQ 277 (506)
Q Consensus 211 ~G~-------g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id----pl~~I~~ia~~ 277 (506)
.|. +. ..++.+|. .|+++|+++|+. ..+.+|+++...+++|.+- ++++|+++|++
T Consensus 177 ~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 244 (433)
T 1z7d_A 177 STTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKK 244 (433)
T ss_dssp ---------------CEEEECT-------TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHH
Confidence 441 00 14555553 289999999851 1244666665556688764 79999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCC
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQ 356 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 356 (506)
||+++++|++|.++......+.....++ ..|.++ ..|+++.. +..|++++++ + +.+.+.. .. .
T Consensus 245 ~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~~~G~v~~~~-~-~~~~l~~---~~-~------- 308 (433)
T 1z7d_A 245 YNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVIL--LGKALSGGHYPISAVLAND-D-IMLVIKP---GE-H------- 308 (433)
T ss_dssp TTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSSCCEEEEECH-H-HHTTCCT---TC-C-------
T ss_pred cCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEE--ECccccCCCCCeEEEEECH-H-HHhhhcc---cc-c-------
Confidence 9999999999976422111111111122 467765 46999866 5789988864 2 2222211 00 0
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEEeecCCCcc
Q 048643 357 VVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMDKLKPKYEN 427 (506)
Q Consensus 357 ~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f~~~~~~~~ 427 (506)
. .+. .........+..+++.+..+ ++.++..++++++.+.|++. |.+. + .++.+.+....
T Consensus 309 ---~--~t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~-- 377 (433)
T 1z7d_A 309 ---G--STY-GGNPLAASICVEALNVLINE---KLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL-- 377 (433)
T ss_dssp ---C--CTT-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT--
T ss_pred ---c--ccC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh--
Confidence 0 011 11111122334445444332 45667777888888888754 3222 2 66777664320
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 428 CHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
....++.+.|.++|+. +.+. +..++|+++ +...++++|+++++.|+++.+++
T Consensus 378 --------------~~~~~~~~~l~~~Gv~-v~~~---~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 378 --------------VNVLDICLKLKENGLI-TRDV---HDKTIRLTP-PLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp --------------CCHHHHHHHHHHTTEE-CCEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------hHHHHHHHHHHHCCeE-EecC---CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHHH
Confidence 0134677777777864 4432 346899987 46678899999999999988765
No 193
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.74 E-value=1.6e-16 Score=164.04 Aligned_cols=311 Identities=11% Similarity=0.006 Sum_probs=187.2
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHH-HHHHHHHHHHHH-hhcccC--C-CCeEEEeC
Q 048643 123 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL-CTLTAARDRVLN-KIGREN--I-SKLVVYGS 197 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l-~al~~ar~~~~~-~~~~~~--~-~~~~v~~s 197 (506)
.|....+..++++.+.+|+ |.+.+ ..++|+|++++++ ..+..+... + ..|... . .+..|++.
T Consensus 71 ~Y~~~~G~~~lr~~ia~~~----~~~~~-------~i~~t~G~~~al~l~~~~~~l~~--~~~~g~~~~~~~d~~~Vl~~ 137 (422)
T 3d6k_A 71 NYGGLLGIADIRELWAEAL----GLPAD-------LVVAQDGSSLNIMFDLISWSYTW--GNNDSSRPWSAEEKVKWLCP 137 (422)
T ss_dssp SSCCSSCCHHHHHHHHHHH----TCCGG-------GEEECSSCHHHHHHHHHHHHHHH--CCTTCSSCGGGSSCCEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHh----CCChh-------HEEEecchHHHHHHHHHHHHhcC--cccccccccccCCCCEEEEe
Confidence 4544445667776665555 66654 7899999998873 332222211 0 000000 0 02357788
Q ss_pred CCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE-EeccCCCCCcccChh---HHHH
Q 048643 198 DQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLC-ATIGTTAITAVDPLK---PLCD 273 (506)
Q Consensus 198 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv-~t~gtt~tG~idpl~---~I~~ 273 (506)
..+|..+..+++..|. +++.+|+++ + .+|+++|++++++. .+.+|+ .+.++|+||.+-|.+ +|++
T Consensus 138 ~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 206 (422)
T 3d6k_A 138 VPGYDRHFTITEHFGF---EMINVPMTD--E-GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAE 206 (422)
T ss_dssp ESCCHHHHHHHHHHTC---EEEEEEEET--T-EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCccHHHHHHHHHcCC---EEEecCCCC--C-CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 8999999999999999 999999975 3 39999999998641 133555 678899999998766 7888
Q ss_pred HHH-HhCCEEEeeccccc-ccccCc-cchhhh-----cCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCcc
Q 048643 274 VAK-QFGIWVHVDAAYAG-SACICP-EFQHFI-----DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 274 ia~-~~g~~lhVDaA~gg-~~~~~~-~~~~~~-----~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+|+ +||+++++|++|+. .+.... ...... .+....+.+..+++|++.....+|+++.+. .. .+.+.....
T Consensus 207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~-~l-~~~l~~~~~ 284 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK-EN-IEWYASHAN 284 (422)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH-HH-HHHHHHHHH
T ss_pred HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH-HH-HHHHHHHHH
Confidence 888 99999999999974 221111 111110 112244567778999954446689888763 22 223321100
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhch-----hHHHHHHHHHHHHHHHHHHHHHc----CCCCc---
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGV-----ANLRHFLRSHVNMAKLFERLVAS----DKRVS--- 413 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~-----~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--- 413 (506)
+.. .....+..+++...+.. +.++++.++..+..+++.+.|.+ .++++
T Consensus 285 ~~~--------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~ 344 (422)
T 3d6k_A 285 VRG--------------------IGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTS 344 (422)
T ss_dssp HHC--------------------SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECC
T ss_pred hhc--------------------CCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeC
Confidence 000 00122333444444433 23444445455556666666643 33343
Q ss_pred c---ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEee-ee-E-----CCEEEEEEEecCCCCCHHH
Q 048643 414 P---SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTH-AV-C-----GGIYAMRFAVGATLTEERH 483 (506)
Q Consensus 414 p---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~-~-----~g~~~lR~~~~~~~tt~ed 483 (506)
| ..+.+++... ....+.+.+.+.|+. +.+ .. + .+..++|+++.. +++++
T Consensus 345 p~~g~~~~~~~~~~------------------~~~~~~~~l~~~gV~-v~~~g~~f~~~~~~~~~~iRis~~~--~~~e~ 403 (422)
T 3d6k_A 345 PTGGYFISVDVVPG------------------TASRVVELAKEAGIA-LTGAGSSFPLHNDPNNENIRLAPSL--PPVAE 403 (422)
T ss_dssp CSBSSCEEEEESTT------------------CHHHHHHHHHHTTEE-CCCTTTTSGGGCCTTSCEEEECCSS--SCHHH
T ss_pred CCcceEEEEECCCC------------------CHHHHHHHHHHCCeE-EEcCccccCCCCCCCCCeEEEecCC--CCHHH
Confidence 4 4566665321 023456667777864 444 22 2 135789999953 78889
Q ss_pred HHHHHHHHHHHHHHHHc
Q 048643 484 VMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 484 i~~li~~l~~~~~~l~~ 500 (506)
++++++.|+++.+++..
T Consensus 404 i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 404 LEVAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999887654
No 194
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.74 E-value=8.9e-16 Score=158.70 Aligned_cols=303 Identities=10% Similarity=-0.021 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC-CCchHHHHHHHHhC
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD-QTHCALQKAAQIVG 212 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~-~~H~s~~ka~~~~G 212 (506)
..++.+.++++++.+.+ ..++++||++|+..++.+++... +.. |.++..|+++. ..|.+...++...|
T Consensus 88 ~~~l~~~la~~~~~~~~-------~v~~~~ggtea~~~ai~~~~~~~-~~~---g~~~~~vi~~~~~yh~~~~~~~~~~~ 156 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYW-QAK---GEARQRFLTFRNGYHGDTFGAMSVCD 156 (429)
T ss_dssp HHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHH-HHH---TCCCCEEEEETTCCCCSSHHHHTTSC
T ss_pred HHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-ccc---CCCCCeEEEECCCCCCCchhhhhhcC
Confidence 34455678888876544 78999999999999998876421 101 11233444444 56655544443333
Q ss_pred CC----------CCCeEEEecCCC----CCcccCHHHHHHHHHHHHhcCCccEEEEEecc-CCCCCcccC----hhHHHH
Q 048643 213 ID----------LKNFRAIKTTKS----SSYGLSPDSLLTQINLDVEAGLVPLFLCATIG-TTAITAVDP----LKPLCD 273 (506)
Q Consensus 213 ~g----------~~~v~~v~~~~~----~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~idp----l~~I~~ 273 (506)
.. ...++.++++.. ..+.+|+++|+++|++.. ..+.+|+++.. ++++|.+-| +++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~ 233 (429)
T 1s0a_A 157 PDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK 233 (429)
T ss_dssp TTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred CchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeecccCCCCcccCCHHHHHHHHH
Confidence 10 114666776421 113699999999997531 12445666555 688998766 999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc--cccCCc
Q 048643 274 VAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP--EYLKNK 350 (506)
Q Consensus 274 ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~--~yl~~~ 350 (506)
+|++||+++|+|++|.++............++ ..|.++++ |+++.+ .++|++++++ +.. +.+.... .+..
T Consensus 234 l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~~~-~~~-~~l~~~~~~~~~~-- 306 (429)
T 1s0a_A 234 ICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTR-EVA-ETISNGEAGCFMH-- 306 (429)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECH-HHH-HHHHTSTTSSCSC--
T ss_pred HHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEEeCH-HHH-HHhhcCCCccccc--
Confidence 99999999999999976422111111111122 46777654 988877 7899998764 322 3332110 0000
Q ss_pred cccCCCccCCCCccccCCCCCCchH---HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc---c--ceEEE
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLK---LWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS---P--SAVMD 419 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~---~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~---p--~~v~f 419 (506)
..+-....+. +..+++.+..+ ++.++..++.+++.+.|+++ |++. + +++.+
T Consensus 307 ---------------~~t~~~n~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~~ 368 (429)
T 1s0a_A 307 ---------------GPTFMGNPLACAAANASLAILESG---DWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVV 368 (429)
T ss_dssp ---------------CCTTTTCHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEE
T ss_pred ---------------CCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEeeEEEEE
Confidence 0011112233 33344433233 45567777889999999875 4543 2 55666
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.+.... + ..++.+.|.++|+ ++.+. + .++|+++ +..+++++|+++++.|+++.+++
T Consensus 369 ~~~~~~----------~-------~~~l~~~l~~~Gi-~v~~~---~-~~iRis~-~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 369 ETTHPV----------N-------MAALQKFFVEQGV-WIRPF---G-KLIYLMP-PYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp EESSCB----------C-------HHHHHHHHHHTTE-ECCCB---T-TEEEECC-CTTCCHHHHHHHHHHHHHHTSSG
T ss_pred EECCcc----------c-------HHHHHHHHHHCCC-EEecc---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHhh
Confidence 654310 0 2356667777776 44442 2 5899997 45678899999999999886544
No 195
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.74 E-value=6.1e-16 Score=159.97 Aligned_cols=320 Identities=11% Similarity=0.040 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCC-chHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQT-HCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~-H~s~~ka~~ 209 (506)
.....++.+|+++.++.+.+ ..++++||++|+..++.+++.....+ |.. ++..|++.+.+ |....-+..
T Consensus 71 ~~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~ 140 (430)
T 3i4j_A 71 SDVLEEYAGRLARFVGLPTF-------RFWAVSGGSEATESAVKLARQYHVER-GEP--GRFKVITRVPSYHGASLGSLA 140 (430)
T ss_dssp EHHHHHHHHHHHHHTTCTTC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTC----------
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEEeCCcCCCCccccc
Confidence 45666777899999987654 78999999999999999987653222 111 23344444444 433332322
Q ss_pred HhCCCC---------C--CeEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC-CCCcccC----hhHHH
Q 048643 210 IVGIDL---------K--NFRAIKTTKS-SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT-AITAVDP----LKPLC 272 (506)
Q Consensus 210 ~~G~g~---------~--~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt-~tG~idp----l~~I~ 272 (506)
..|... . .+..+|.+.. ..+..|+++|+++|++.. ...+.+|+++..++ ++|.+-+ +++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~ 218 (430)
T 3i4j_A 141 ASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVR 218 (430)
T ss_dssp ---------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHH
T ss_pred ccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHH
Confidence 222110 0 3445554321 013567899999997531 01244666666666 7888766 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc-cccCC
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFID-GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP-EYLKN 349 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~-gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~-~yl~~ 349 (506)
++|++||+++|+|++|.++......+..... ++ ..|.+++ .|.++.. +..|+++.+ ++. .+.+.... .+...
T Consensus 219 ~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~--sK~l~~G~~r~G~~~~~-~~i-~~~~~~~~~~~~~~ 293 (430)
T 3i4j_A 219 DICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVL--GKGLAAGYAPLAGLLAA-PQV-YETVMGGSGAFMHG 293 (430)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEE--CGGGTTTSSCCEEEEEC-HHH-HHHHHHTTCBCCCC
T ss_pred HHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEE--cccccCCccccEEEEEC-HHH-HHHHhccCCccccc
Confidence 9999999999999999865322111111111 22 3566665 4998866 667888774 333 23332111 11110
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHH---HHHhchhHHHHHHHHHHHHHHHHHHHHH----cCCCCc---c--ceE
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLV---IRNYGVANLRHFLRSHVNMAKLFERLVA----SDKRVS---P--SAV 417 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~---p--~~v 417 (506)
.+-...++...++ |+.+..+ +++++..++.+++++.|. +.|.+. + +++
T Consensus 294 -----------------~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 353 (430)
T 3i4j_A 294 -----------------FTYAGHPVSVAAGLSVLDIVERE---DLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLL 353 (430)
T ss_dssp -----------------CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEE
T ss_pred -----------------CCCCCCHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEE
Confidence 0111123333333 3333222 334444555555555554 455554 2 666
Q ss_pred EEeecCCCcccccccccchHHHH--HHHHHHHHHHHHhcCcEEEeee-e--ECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAI--NEFNRELLESINASGKAYMTHA-V--CGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~g~~~~~~~-~--~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
.+.+.+.. ..+.. .....++.+.+.++|+++.... . -.+..++|+++ ....++++|+++++.|+
T Consensus 354 ~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~l~~l~ 422 (430)
T 3i4j_A 354 GVVLGDLA----------TGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGP-PLSITAAEVDGLLALLA 422 (430)
T ss_dssp EEEEC----------------------CHHHHHHHHHHTTEECC-----------CEEEECC-CTTCCHHHHHHHHHHHH
T ss_pred EEEecccc----------ccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEEC-CCCCCHHHHHHHHHHHH
Confidence 66654210 00000 0113567778888887543221 1 12356899987 35678889999999999
Q ss_pred HHHHHH
Q 048643 493 EQLEAF 498 (506)
Q Consensus 493 ~~~~~l 498 (506)
++.+++
T Consensus 423 ~~l~~~ 428 (430)
T 3i4j_A 423 GALEDV 428 (430)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988765
No 196
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.74 E-value=2.9e-15 Score=155.83 Aligned_cols=324 Identities=10% Similarity=0.029 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC-CchHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ-THCALQKAAQ 209 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~-~H~s~~ka~~ 209 (506)
.+...++.+|++++++...+ ..++++|||+|+..|+.+++...... |.. .+..|++... .|-+...+..
T Consensus 86 ~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~al~~~~~~~~~~-G~~--~~~~vi~~~~~yhg~~~~~~~ 155 (448)
T 3dod_A 86 NVPATQLAETLIDISPKKLT-------RVFYSDSGAEAMEIALKMAFQYWKNI-GKP--EKQKFIAMKNGYHGDTIGAVS 155 (448)
T ss_dssp EHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEEC------------
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhh-CCC--CCCEEEEECCCCCCccHHHHH
Confidence 45666778999999865433 68999999999999999998753221 100 1344444444 4544333333
Q ss_pred HhCCC---------CCCeEEEecCCCCCccc-----------CHHHHHHHHHHHHhcCCccEEEEEeccC-CCCCcccC-
Q 048643 210 IVGID---------LKNFRAIKTTKSSSYGL-----------SPDSLLTQINLDVEAGLVPLFLCATIGT-TAITAVDP- 267 (506)
Q Consensus 210 ~~G~g---------~~~v~~v~~~~~~~~~~-----------d~~~L~~~i~~~~~~g~~p~~Vv~t~gt-t~tG~idp- 267 (506)
..|.. ...+..+|... .++. |+++|+++|++.. ..+.+|++.-.. ++.|.+-+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~~ 230 (448)
T 3dod_A 156 VGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIVMP 230 (448)
T ss_dssp -----------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEECC
T ss_pred hcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecCC
Confidence 32221 11345566532 2333 5899999998421 124456666555 77787755
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcCC
Q 048643 268 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLSTN 343 (506)
Q Consensus 268 ---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~ 343 (506)
+++|+++|++||+++++|++|.++......+.....++ ..|.++++ |.++..+ ..|+++.++. +.+.+...
T Consensus 231 ~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~~~ig~v~~~~~--~~~~~~~~ 305 (448)
T 3dod_A 231 EGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGYLPIAVTFATED--IYKAFYDD 305 (448)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH--HHHTTCSC
T ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCcCceEEEEECHH--HHHHhhhc
Confidence 99999999999999999999986532221111112233 46777654 9998774 7888887643 23333220
Q ss_pred ---ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc---CCCCc---c
Q 048643 344 ---PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS---DKRVS---P 414 (506)
Q Consensus 344 ---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~---~~~~~---p 414 (506)
...+.. ..+-...++...+++..+..-.-++++++..++.+++++.|.+ .|.+. +
T Consensus 306 ~~~~~~~~~----------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 369 (448)
T 3dod_A 306 YENLKTFFH----------------GHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQ 369 (448)
T ss_dssp GGGCCCCCC----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE
T ss_pred cccCCcccc----------------cCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 000000 0111123333333333331100123455555666666666654 33333 2
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
.++.+.+....... ...... .....++.+.+.++|+. +.+. + .++|+++ +...++++|+++++.|+
T Consensus 370 ~g~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~l~~~Gv~-~~~~---~-~~iRi~~-~~~~t~e~i~~~l~~l~ 437 (448)
T 3dod_A 370 LGFMCGAELVRSKETK----EPYPAD--RRIGYKVSLKMRELGML-TRPL---G-DVIAFLP-PLASTAEELSEMVAIMK 437 (448)
T ss_dssp ETTEEEEEECSBTTTT----BCCCGG--GCHHHHHHHHHHHTTEE-CCEE---T-TEEEECC-CTTCCHHHHHHHHHHHH
T ss_pred eeEEEEEEEccCcccc----cccchh--hHHHHHHHHHHHHCCcE-Eecc---C-CEEEEEC-CCCCCHHHHHHHHHHHH
Confidence 55566554321000 000000 00135677777788864 4433 3 6899987 46678889999999999
Q ss_pred HHHHHHHccC
Q 048643 493 EQLEAFLTTN 502 (506)
Q Consensus 493 ~~~~~l~~~~ 502 (506)
++.+++...+
T Consensus 438 ~~l~~~~~~~ 447 (448)
T 3dod_A 438 QAIHEVTSLE 447 (448)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhccc
Confidence 9998876543
No 197
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.73 E-value=1.5e-16 Score=169.28 Aligned_cols=360 Identities=8% Similarity=0.012 Sum_probs=211.5
Q ss_pred HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHHc-C-CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 048643 105 IAGFLGEMLSSGFNVVGFNWISSPAATELENIVMDWLGQML-K-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 182 (506)
Q Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~-g-~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~ 182 (506)
++.++.++....... ..+....+..++++++.+++.+.. + .+... ....++|+||++|+..++.+...+.+-
T Consensus 117 ~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----~~~i~~t~G~t~al~~~~~~l~~~~l~ 190 (533)
T 3f6t_A 117 RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAE----QTDLFPTEGGTAAIVYAFHSLAENHLL 190 (533)
T ss_dssp HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG----GEEEEEEEHHHHHHHHHHHHHHHTTSS
T ss_pred CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC----cceEEEECCHHHHHHHHHHHhhhhhcc
Confidence 566666666655432 122244567899999999997773 3 33210 026899999999998777653221000
Q ss_pred hhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCC--CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 183 KIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTK--SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 183 ~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~--~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
.++..|+++..+|.++..+++..|. +++.+|++. ++++.+|+++|++++++. +.+|+++.++|
T Consensus 191 ------~~gd~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~N 255 (533)
T 3f6t_A 191 ------KKGDKIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTN 255 (533)
T ss_dssp ------CTTCEEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCT
T ss_pred ------CCcCEEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCC
Confidence 1557888999999999999999999 899999864 346899999999988643 44788889999
Q ss_pred CCCcccChh---HHHHHHH-HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchh
Q 048643 261 AITAVDPLK---PLCDVAK-QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSA 335 (506)
Q Consensus 261 ~tG~idpl~---~I~~ia~-~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~ 335 (506)
++|.+-|.+ +|+++|+ +||+++++|.+|+.+..-....... ....+.+..+++|.++.| ..+|++++++...
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~ 332 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV---VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH---SGGGEEEEEESHHHHTCGGGCEEEEEEESSCH
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc---CCCCEEEEecCcccCCCcccceEEEEECcHHH
Confidence 999996655 8888888 5899999999998654322221111 123457788999999844 4589988887643
Q ss_pred HHhhhcCCcc---------cc--CCccccCC-------CccCCCCccccCCCCCCchHHHH----HHHHh--------ch
Q 048643 336 LVSSLSTNPE---------YL--KNKATESK-------QVVDYKDWQITLSRRFRSLKLWL----VIRNY--------GV 385 (506)
Q Consensus 336 l~~~~~~~~~---------yl--~~~~~~~~-------~~~~~~~~~~~~sr~~~al~~~~----~l~~~--------G~ 385 (506)
+...+..-++ |- ......-. ...........+ .......+ ++..+ ..
T Consensus 333 ~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~---~~~~~q~a~a~~a~~~L~~~~g~~~~~ 409 (533)
T 3f6t_A 333 FDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAG---LSTPQQIMEALFSMTHLLTSTNGGSDD 409 (533)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCS---CCHHHHHHHHHHHHHHHTTCBGGGTBC
T ss_pred HHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccC---CChHHHHHHHHHHHHHHhhhccccchH
Confidence 3222211100 00 00000000 000000000001 11111111 23333 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--ceEEE-eecCCCcccccccccch-HH-HH--HHHHHHHHHHH-Hhc
Q 048643 386 ANLRHFLRSHVNMAKLFERLVASDKRVS---P--SAVMD-KLKPKYENCHSQQLVTE-EE-AI--NEFNRELLESI-NAS 454 (506)
Q Consensus 386 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p--~~v~f-~~~~~~~~~~~~~~~~~-~~-~~--~~~~~~l~~~l-~~~ 454 (506)
+.++++.++..++.++|.+.|. . ++. | +.+.+ .+.... +..... -. .. +....++..++ .+.
T Consensus 410 ~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~~~~g~~~~~~l~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~ll~~~ 482 (533)
T 3f6t_A 410 PYIDIARKLVSERYDQLHDAMQ-A-PKDETDTNTHYYSLIDIYRLA-----EKIYGKEFRDYLTNNFEQVDFLLKLAEKN 482 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-C-CCCCSTTBCCSEEEEEHHHHH-----HHHHCHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-C-CccccCCCceEEEEEehHhhh-----hhccchHHHHHhhccCCHHHHHHHHHHhC
Confidence 5677788888889999999997 5 455 4 33332 221100 000000 00 00 00112333444 455
Q ss_pred CcEEEeeeeEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 455 GKAYMTHAVCG-GIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 455 g~~~~~~~~~~-g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
|+.+..+..+. +..++|+++.+ .++++|+++++.|.++.+++.+
T Consensus 483 GV~v~pg~~f~~~~~~iRls~a~--~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 483 GVVLVDGVGFGAKPGELRVSQAN--LPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp TSSSCTTEEECSSTTEEEEESSS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEeCCcccCCCCCEEEEEEee--CCHHHHHHHHHHHHHHHHHHHH
Confidence 76433322222 24689999854 4677999999999999887654
No 198
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.73 E-value=3.7e-16 Score=156.01 Aligned_cols=269 Identities=12% Similarity=0.062 Sum_probs=179.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA 208 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~ 208 (506)
...++++.+.+|+.+. ..+.+ ..++|+|+++++..++.+. +..|+++ .+|.++...+
T Consensus 57 ~~~~lr~~la~~~~~~-~~~~~-------~v~~~~G~~~al~~~~~~~--------------gd~Vl~~-p~y~~~~~~~ 113 (335)
T 1uu1_A 57 PDEELIEKILSYLDTD-FLSKN-------NVSVGNGADEIIYVMMLMF--------------DRSVFFP-PTYSCYRIFA 113 (335)
T ss_dssp SCHHHHHHHHHHHTCS-SCCGG-------GEEEESSHHHHHHHHHHHS--------------SEEEECS-SSCHHHHHHH
T ss_pred chHHHHHHHHHHcCCC-CCCHH-------HEEEcCChHHHHHHHHHHh--------------CCcEEEC-CCcHHHHHHH
Confidence 3455665544444322 15443 7899999999987776554 2357788 9999999999
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+..|. +++.+|.++ ++.+|+++| + .+.+|+++.++|+||.+-|.+++.++++.+| ++++|++|
T Consensus 114 ~~~g~---~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~ 176 (335)
T 1uu1_A 114 KAVGA---KFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAY 176 (335)
T ss_dssp HHHTC---EEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTT
T ss_pred HHcCC---eEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcc
Confidence 99999 999999864 468888877 1 2457777889999999999999999999989 99999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcC-CccccCCccccCCCccCCCCcccc
Q 048643 289 AGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLST-NPEYLKNKATESKQVVDYKDWQIT 366 (506)
Q Consensus 289 gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~ 366 (506)
+.+.. . .....+. ....+.+..+++|+++.| ..+|+++++ ++.. +.+.. ...|
T Consensus 177 ~~~~~-~-~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~l~~~~~~~-------------------- 231 (335)
T 1uu1_A 177 YEFHG-E-SYVDFLK-KYENLAVIRTFSKAFSLAAQRVGYVVAS-EKFI-DAYNRVRLPF-------------------- 231 (335)
T ss_dssp HHHHC-C-CCGGGGG-TCSSEEEEEESTTTTTCGGGCCEEEEEC-HHHH-HHHHHHSCTT--------------------
T ss_pred hhhcc-h-hHHHHhh-hCCCEEEEecchhhcCCcccCeEEEEeC-HHHH-HHHHHhcCCC--------------------
Confidence 76432 1 1111111 124567788999999743 457988884 3332 22211 1000
Q ss_pred CCCCCCchHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---ceEEEeecCCCcccccccccchHHHH
Q 048643 367 LSRRFRSLKLWLVIRNYG-VANLRHFLRSHVNMAKLFERLVASDKRVS--P---SAVMDKLKPKYENCHSQQLVTEEEAI 440 (506)
Q Consensus 367 ~sr~~~al~~~~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~~v~f~~~~~~~~~~~~~~~~~~~~~ 440 (506)
....+..+++...+. .+.++++.++..++++++.+.|++. +++ | +.+.+++..
T Consensus 232 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~----------------- 290 (335)
T 1uu1_A 232 ---NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRITDSRGNFVFVFMEK----------------- 290 (335)
T ss_dssp ---CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCCSSEEEEECCT-----------------
T ss_pred ---CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEcCCCCeEEEEECCC-----------------
Confidence 012233333333332 2467788888999999999999887 566 4 555555421
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 441 NEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 441 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
....++.+.|.++|+. +.+ +..++|+++. ++++++++++.|++
T Consensus 291 -~~~~~~~~~l~~~gi~-v~~----~~~~iRis~~----~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 291 -EEKERLLEHLRTKNVA-VRS----FREGVRITIG----KREENDMILRELEV 333 (335)
T ss_dssp -HHHHHHHHHHHHHTEE-EEE----ETTEEEEECC----CHHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHCCEE-EEE----CCCeEEEEeC----CHHHHHHHHHHHHh
Confidence 0134566677777864 444 2357999984 35689999998875
No 199
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.73 E-value=6.8e-16 Score=160.23 Aligned_cols=297 Identities=9% Similarity=-0.028 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC-
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG- 212 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G- 212 (506)
..++.+++++++|.+ ..++++||++|+..++.+++.......|....++.+|+.....|.+...++...|
T Consensus 120 ~~~l~~~la~~~g~~---------~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~ 190 (439)
T 2oat_A 120 LGEYEEYITKLFNYH---------KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTD 190 (439)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCC
T ss_pred HHHHHHHHHHhcCCC---------EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCC
Confidence 344455666666632 6799999999999999998754221111110013455555566766666665544
Q ss_pred ------CCC--CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc----ChhHHHHHHHHhCC
Q 048643 213 ------IDL--KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD----PLKPLCDVAKQFGI 280 (506)
Q Consensus 213 ------~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id----pl~~I~~ia~~~g~ 280 (506)
.+. ..++.+|. .|+++|+++|+. ..+.+|+++...+++|.+- ++++|+++|++||+
T Consensus 191 ~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gi 258 (439)
T 2oat_A 191 PTSYDGFGPFMPGFDIIPY-------NDLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQV 258 (439)
T ss_dssp HHHHTTSCSCCTTEEEECS-------SCHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred hhcccCCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 111 26677764 289999998852 1244666665556678765 79999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccC
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVD 359 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 359 (506)
++++|++|.|+......+.....++ ..|.+ ++.|+++.. +..|++++++. +.+.+.. .. .
T Consensus 259 llI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~~~G~v~~~~~--~~~~l~~---~~-~---------- 319 (439)
T 2oat_A 259 LFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLYPVSAVLCDDD--IMLTIKP---GE-H---------- 319 (439)
T ss_dssp EEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEEEECHH--HHTTSCT---TS-S----------
T ss_pred EEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCCCeEEEEECHH--HHhccCC---CC-c----------
Confidence 9999999976422111111111223 46766 456999876 67899888742 2222221 00 0
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc------c--ceEEEeecCCCcccccc
Q 048643 360 YKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS------P--SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 360 ~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~------p--~~v~f~~~~~~~~~~~~ 431 (506)
. .+. .+.......+..+++.+..+ ++.++..++++++.+.|++. ++. + .++.+.+....
T Consensus 320 ~--~t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~------ 386 (439)
T 2oat_A 320 G--STY-GGNPLGCRVAIAALEVLEEE---NLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK------ 386 (439)
T ss_dssp C--CSS-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS------
T ss_pred c--cCC-CcCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc------
Confidence 0 011 11111222334445544333 45677888999999999886 333 2 66666664320
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
. ....++.+.+.++|+. +.+ .+..++|+++ +...++++|+++++.|+++.++
T Consensus 387 ----~-----~~~~~l~~~l~~~Gv~-v~~---~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 387 ----D-----WDAWKVCLRLRDNGLL-AKP---THGDIIRFAP-PLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ----S-----CCHHHHHHHHHHTTEE-CCB---SSSSEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----c-----HHHHHHHHHHHHCCeE-Eec---CCCCEEEEEC-ccCCCHHHHHHHHHHHHHHHHh
Confidence 0 0124667777777864 443 2356899987 4677889999999999987653
No 200
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.73 E-value=4.2e-15 Score=155.87 Aligned_cols=326 Identities=11% Similarity=0.020 Sum_probs=192.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+...++.+|++++++.+.+ ..++++||++||..|+.++|.....+ |..+ ++.+|......|-+..-+..
T Consensus 95 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~Aik~a~~~~~~~-g~~~-~~~vi~~~~~yHg~~~~~~~ 165 (476)
T 3i5t_A 95 ATSPAARLAEKIATLTPGDLN-------RIFFTTGGSTAVDSALRFSEFYNNVL-GRPQ-KKRIIVRYDGYHGSTALTAA 165 (476)
T ss_dssp BCHHHHHHHHHHHTTSSTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCCcCcCChhhcc
Confidence 355667788999999865443 68999999999999999998764332 2111 23455555566655544444
Q ss_pred HhCCC---------CCCeEEEecCCCCC-cccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 210 IVGID---------LKNFRAIKTTKSSS-YGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 210 ~~G~g---------~~~v~~v~~~~~~~-~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
..|.. ...+..++....-+ +..| +++|+++|++.. ...+.+|++....++.|.+-+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~ 243 (476)
T 3i5t_A 166 CTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGY 243 (476)
T ss_dssp TCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTH
T ss_pred ccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHH
Confidence 33321 12345555432100 1122 789999887521 123456777777777887655
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc-
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHF-IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP- 344 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~-~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~- 344 (506)
|++|+++|++||+++++|++|.++......+... ..++ ..|.++++ |.++.. +..|+++.++ + +.+.+....
T Consensus 244 L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~-~-i~~~~~~~~~ 318 (476)
T 3i5t_A 244 HARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISE-A-VLARISGENA 318 (476)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECH-H-HHHTTSGGGC
T ss_pred HHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECH-H-HHHHHhcCCc
Confidence 9999999999999999999998753322211111 2233 46777765 998877 6788888754 2 233332110
Q ss_pred ---cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCC---Cc---c-
Q 048643 345 ---EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKR---VS---P- 414 (506)
Q Consensus 345 ---~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~---~~---p- 414 (506)
.+.. ..+-...++...+++..+..-.-++++++..++.+++++.|+++.. +. +
T Consensus 319 ~~~~~~~-----------------~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~ 381 (476)
T 3i5t_A 319 KGSWFTN-----------------GYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAETRSV 381 (476)
T ss_dssp TTCEECC-----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEE
T ss_pred ccccccc-----------------cCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 0110 0111123344444444332111134567777788888888876532 22 2
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.++.+.+..... .............++.+.+.++|++ +.+. | .++|++. ....++++|+++++.|++
T Consensus 382 G~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---g-~~iRi~p-~l~~t~e~i~~~l~~l~~ 449 (476)
T 3i5t_A 382 GLVGCVQCLLDPT------RADGTAEDKAFTLKIDERCFELGLI-VRPL---G-DLCVISP-PLIISRAQIDEMVAIMRQ 449 (476)
T ss_dssp TTEEEEEECCC-----------CCHHHHHHHHHHHHHHHHTTEE-CEEE---T-TEEEECC-CTTCCHHHHHHHHHHHHH
T ss_pred CceeEEEEecCcc------ccccccchhHHHHHHHHHHHHCCCE-EEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHH
Confidence 555666543210 0000000112356777888888864 4332 3 6899986 356788999999999999
Q ss_pred HHHHHHc
Q 048643 494 QLEAFLT 500 (506)
Q Consensus 494 ~~~~l~~ 500 (506)
+.+++.+
T Consensus 450 ~l~~~~~ 456 (476)
T 3i5t_A 450 AITEVSA 456 (476)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877754
No 201
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.73 E-value=2.7e-16 Score=161.81 Aligned_cols=232 Identities=13% Similarity=0.069 Sum_probs=158.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCccccCCCCcEEE---cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC-CCchHH
Q 048643 129 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVI---QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD-QTHCAL 204 (506)
Q Consensus 129 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~-~~H~s~ 204 (506)
...++| +.+++++|.+. .++ ++||++||..++.+... ++..|+++. ..|...
T Consensus 74 ~~~~Le----~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------pGD~Vl~~~~~~y~~~ 129 (427)
T 3i16_A 74 GRDSLD----AVYARVFNTES---------ALVRPHFVNGTHALGAALFGNLR-----------PGNTMLSVCGEPYDTL 129 (427)
T ss_dssp HHHHHH----HHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHHCC-----------TTCEEEESSSSCCGGG
T ss_pred HHHHHH----HHHHHHhCCcc---------eEEeCCCccHHHHHHHHHHHHhC-----------CCCEEEEeCCCccHHH
Confidence 344555 56888998764 355 78899999877766433 566777787 777655
Q ss_pred H-----------HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----cCCCCCcccChh
Q 048643 205 Q-----------KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATI----GTTAITAVDPLK 269 (506)
Q Consensus 205 ~-----------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~----gtt~tG~idpl~ 269 (506)
. +.++..|+ +++.+|.++ +|.+|+++|++++++. ..+.+|+++. +++++|.+.|++
T Consensus 130 ~~~~g~~~~~~~~~l~~~G~---~~~~v~~~~--~g~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~ 200 (427)
T 3i16_A 130 HDVIGITENSNMGSLKEFGI---NYKQVDLKE--DGKPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIK 200 (427)
T ss_dssp HHHHTCSCCCSSCCTGGGTC---EEEECCCCT--TSSCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHH
T ss_pred HHHHhccccchHHHHHHcCC---EEEEecCcc--CCCcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHH
Confidence 5 34455688 888998865 4699999999999731 1244788877 899999999999
Q ss_pred HHHHHHHH--hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC--cceEEEEeCchhHHhhhcC--C
Q 048643 270 PLCDVAKQ--FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSALVSSLST--N 343 (506)
Q Consensus 270 ~I~~ia~~--~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~--~ 343 (506)
+|+++|++ +|+++|||++|+.+........ .++|.++.++||+++.+. ..|+++.+ ++.. +.+.. .
T Consensus 201 ~i~~la~~~~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li-~~l~~~~~ 272 (427)
T 3i16_A 201 SIVDCVKNIRKDIICFVDNCYGEFMDTKEPTD------VGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCI-EKTSYRLT 272 (427)
T ss_dssp HHHHHHHHHCTTSEEEEECTTTTTSSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHH-HHHHHHHS
T ss_pred HHHHHHHHhCCCCEEEEECCCccccccCCccc------cCCeEEEecCcccCCCCCCceEEEEEEC-HHHH-HHHHHhcc
Confidence 99999999 9999999999986653221111 168999999999998742 24666654 3333 22221 1
Q ss_pred ccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---c---
Q 048643 344 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---S--- 415 (506)
Q Consensus 344 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~--- 415 (506)
...+ +...+-.+. ..|..++. ......++++..+++.++++.|++++ ++ | .
T Consensus 273 ~~~~----------------g~~~~~~~~--~a~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~~g-~~V~p~~~~~~~ 331 (427)
T 3i16_A 273 VPGI----------------GGECGSTFG--VVRSMYQG--LFLAPHISMEALKGAILCSRIMELAG-FEVMPKYDEKRS 331 (427)
T ss_dssp CTTT----------------GGGCCCCTT--CHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTT-CEEESCTTSCCS
T ss_pred cCcc----------------CccCCccHH--HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCCCCCc
Confidence 1111 111111111 13555553 35567888999999999999999984 45 3 3
Q ss_pred --eEEEeec
Q 048643 416 --AVMDKLK 422 (506)
Q Consensus 416 --~v~f~~~ 422 (506)
+++|.+.
T Consensus 332 ~~i~~i~l~ 340 (427)
T 3i16_A 332 DIIQSIKFN 340 (427)
T ss_dssp SSCEEEECS
T ss_pred cEEEEEEEC
Confidence 7888775
No 202
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.73 E-value=2.8e-15 Score=155.95 Aligned_cols=319 Identities=13% Similarity=0.080 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+.++++++...+ ..++++|||+|+..++.+++..... .|..+ ++.+|+.+...|.+...++...
T Consensus 93 ~~~~~l~~~la~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~~~-~g~~~-~~~vi~~~~~yhg~~~~~~~~~ 163 (449)
T 3a8u_X 93 PLSFQLAEKITDLTPGNLN-------HVFFTDSGSECALTAVKMVRAYWRL-KGQAT-KTKMIGRARGYHGVNIAGTSLG 163 (449)
T ss_dssp HHHHHHHHHHHTTSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHH-TTCTT-CCEEEEETTCCCCSSHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHHHh-cCCCC-CCEEEEECCCcCCCChhhhhcc
Confidence 3445666778888765443 6899999999999999988753211 11110 2345555666676666666655
Q ss_pred CC-------C--CCCeEEEecCCCCC---cccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 212 GI-------D--LKNFRAIKTTKSSS---YGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 212 G~-------g--~~~v~~v~~~~~~~---~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
|. + ...++.++++..-+ ..+| +++|+++|++.. ...+.+|+++...+++|.+-|
T Consensus 164 g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~~~~ 241 (449)
T 3a8u_X 164 GVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPPEGY 241 (449)
T ss_dssp CCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTH
T ss_pred CChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCCHHH
Confidence 42 1 12456666542100 0246 999999997531 012446666655567998877
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|+++|++||+++++|++|.++......+.....++ ..|.+++ .|+++.. +..|++++++ +. .+.+......
T Consensus 242 l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~~G~~~~~~-~~-~~~l~~~~~~ 316 (449)
T 3a8u_X 242 LKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTNGAIPMGAVIAST-EI-YQTFMNQPTP 316 (449)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEH-HH-HHHHHTCSSC
T ss_pred HHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccCCCCceEEEEECH-HH-HHHhhccCcc
Confidence 99999999999999999999965432211111111122 3576654 5998854 4588888864 32 2333221000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc------c--c
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS------P--S 415 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~------p--~ 415 (506)
. . .. .+ ....+-....+.. ..+++.+..+ ++.++..++.+++.+.|++++++. + .
T Consensus 317 ---~-~--~~--~~---~~~~t~~~~~~~~aa~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~ 382 (449)
T 3a8u_X 317 ---E-Y--AV--EF---PHGYTYSAHPVACAAGLAALCLLQKE---NLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGL 382 (449)
T ss_dssp ---T-T--SC--SS---CCCCTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT
T ss_pred ---c-c--cc--cc---cccCCCcccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEE
Confidence 0 0 00 00 0001111123333 3334433222 466778888899999998754332 2 6
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
++.+.+.... . .. .....++.+.|.++|+. +.+. + .++|+++ ...+++++|+++++.|+++.
T Consensus 383 ~~~i~~~~~~--------~-~~---~~~~~~~~~~l~~~Gv~-v~~~---g-~~iRis~-~~~~t~~~i~~~l~~l~~~l 444 (449)
T 3a8u_X 383 AGAIQIAPRD--------G-DA---IVRPFEAGMALWKAGFY-VRFG---G-DTLQFGP-TFNSKPQDLDRLFDAVGEVL 444 (449)
T ss_dssp EEEEEECCBT--------T-BS---SHHHHHHHHHHHHHTEE-CEEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCc--------c-cc---cccHHHHHHHHHHCCcE-EecC---C-CEEEEEC-CCcCCHHHHHHHHHHHHHHH
Confidence 6677664320 0 00 00112466677777764 4443 3 6899997 35678899999999999987
Q ss_pred HHH
Q 048643 496 EAF 498 (506)
Q Consensus 496 ~~l 498 (506)
+++
T Consensus 445 ~~~ 447 (449)
T 3a8u_X 445 NKL 447 (449)
T ss_dssp HHC
T ss_pred HHH
Confidence 654
No 203
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.73 E-value=1.7e-16 Score=162.54 Aligned_cols=217 Identities=14% Similarity=0.159 Sum_probs=152.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHH
Q 048643 126 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQ 205 (506)
Q Consensus 126 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 205 (506)
..|...++|+ .++++.|.+ ..+++++|++|+..+ ..... ++..|+++...|.+..
T Consensus 65 ~~p~~~~l~~----~la~l~g~~---------~~~~~~sG~~Ai~~~-~~l~~-----------~gd~Vi~~~~~y~~~~ 119 (400)
T 3nmy_A 65 HNPTRFAYER----CVAALEGGT---------RAFAFASGMAATSTV-MELLD-----------AGSHVVAMDDLYGGTF 119 (400)
T ss_dssp CCHHHHHHHH----HHHHHHTCS---------EEEEESSHHHHHHHH-HTTSC-----------TTCEEEEESSCCHHHH
T ss_pred CCHHHHHHHH----HHHHHhCCC---------CEEEecCHHHHHHHH-HHHcC-----------CCCEEEEeCCCchHHH
Confidence 4455555654 477777764 357778888887652 22111 4567888888888666
Q ss_pred HHHH-----HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCC
Q 048643 206 KAAQ-----IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 280 (506)
Q Consensus 206 ka~~-----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~ 280 (506)
..+. ..|+ +++.++.+ |+++|+++|++. +.+|++..++|++|.+.|+++|+++|++||+
T Consensus 120 ~~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~ 183 (400)
T 3nmy_A 120 RLFERVRRRTAGL---DFSFVDLT-------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGL 183 (400)
T ss_dssp HHHHHTHHHHHCC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred HHHHHhhHhhcCe---EEEEECCC-------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCC
Confidence 5543 3588 88888753 789999998653 4488889999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC--cce-EEEEeCchhHHhhhcCCccccCCccccCCCc
Q 048643 281 WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL--DCC-CLWVKDPSALVSSLSTNPEYLKNKATESKQV 357 (506)
Q Consensus 281 ~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--~~g-~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 357 (506)
+++||++|+.+....+. . .++|.++.++||+++.|. -.| +++++++... +.+.....+
T Consensus 184 ~livDe~~~~~~~~~~~-~------~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~-~~l~~~~~~----------- 244 (400)
T 3nmy_A 184 LTVVDNTFASPMLQRPL-S------LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELA-EQMAFLQNS----------- 244 (400)
T ss_dssp EEEEECTTTHHHHCCGG-G------GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHH-HHHHHHHHH-----------
T ss_pred EEEEECCCcccccCChh-h------cCCcEEEecCccccCCCCCcceeEEEEeCCHHHH-HHHHHHHHh-----------
Confidence 99999999865543321 1 169999999999999773 245 4555555433 222110000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 048643 358 VDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS 413 (506)
Q Consensus 358 ~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 413 (506)
.+....++..|..++. .+.+..++++..++++++.+.|++.|.++
T Consensus 245 ---------~g~~~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 289 (400)
T 3nmy_A 245 ---------IGGVQGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLETHPAIE 289 (400)
T ss_dssp ---------HCCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred ---------cCCCCCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 1112245667777774 46678889999999999999999887654
No 204
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.73 E-value=6e-16 Score=158.91 Aligned_cols=311 Identities=14% Similarity=0.071 Sum_probs=189.5
Q ss_pred HHhhcCCCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcE--EEcCCchHHHHHHHHHHHHHHHHhhcccCCC
Q 048643 113 LSSGFNVVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG--VIQGTTCEAILCTLTAARDRVLNKIGRENIS 190 (506)
Q Consensus 113 l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g--~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~ 190 (506)
+..........|...++..++++.+.+|+. |...... ..... ..+.||++++..+..+++.. ..+
T Consensus 64 ~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~---~~~~~~~--~~~~i~~~~~~~g~ga~~~~~~~~~~~--------~~~ 130 (409)
T 4eu1_A 64 VKQATLGTNMDYAPVTGIASFVEEAQKLCF---GPTCAAL--RDGRIASCQTLGGTGALRIGGDLLNRF--------VAN 130 (409)
T ss_dssp HHTCCCCSCCCCCCTTCCHHHHHHHHHHHH---CSSCHHH--HTTCEEEEEESHHHHHHHHHHHHGGGT--------SSS
T ss_pred HHhcCccccccCCCCCCcHHHHHHHHHHHc---CCCchhh--ccCceeeeecccchHHHHHHHHHHHHh--------cCC
Confidence 333333334456556667889888888873 4331000 00133 34888888886554433321 014
Q ss_pred CeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---
Q 048643 191 KLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 191 ~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
+..|+++..+|.++...++..|. +++.+|++.++++.+|+++|++++++.. ....+++.+.++|+||.+-+
T Consensus 131 gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~ 204 (409)
T 4eu1_A 131 CNRIYGPDVGYPNHESIFAKAGM---ELTPYSYYDPATKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDD 204 (409)
T ss_dssp CCEEEEESSCCTHHHHHHHHTTC---EEEEECCEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHH
T ss_pred CCEEEEeCCCcHhHHHHHHHcCC---eEEEEEeecCcCCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHH
Confidence 56788899999999999999999 9999998533468999999999997521 12456777889999999966
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCc-----cchhhhcCCCCCC-eeEEcCccccCCC-CcceEE--EEeCchh---
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICP-----EFQHFIDGVEGAD-SFSLNAHKWFFTT-LDCCCL--WVKDPSA--- 335 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~-----~~~~~~~gi~~aD-si~~~~hK~l~~p-~~~g~~--~~r~~~~--- 335 (506)
+++|+++|++||+++++|.+|+++..-.. ...... +. ..+ .+..+++|.++.| ..+|++ ++.++..
T Consensus 205 l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~ 282 (409)
T 4eu1_A 205 WRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLV-DM-VPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKR 282 (409)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-TT-SSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHH-hh-CCcEEEEecCcccccCccCCceEEEEEeCCHHHHHH
Confidence 56699999999999999999987543220 111111 11 223 3455788999854 567887 6666542
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHHHHHHHHHHHHHHH
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRSHVNMAKLFERLVA 407 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~~~~~a~~l~~~l~ 407 (506)
+...+.....+. ..+ ...+..+++...+. .+.++++.++..++++++.+.|+
T Consensus 283 l~~~~~~~~~~~-----------------~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 342 (409)
T 4eu1_A 283 LVSQLALLIRPM-----------------YNN---PPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELK 342 (409)
T ss_dssp HHHHHHHHHHHH-----------------HSS---CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-----------------cCC---CChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111100000 000 01233333333332 33467788889999999999999
Q ss_pred cCCC---Cc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEEEEEEEecCCC
Q 048643 408 SDKR---VS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCGGIYAMRFAVGATL 478 (506)
Q Consensus 408 ~~~~---~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~ 478 (506)
+.+. ++ | +++.|. +. + . ++..++. +.|+ ++.+. .|++++. .
T Consensus 343 ~~g~~~~~~~~~~~~~~~~~~--~~-----------~----~----~~~~~ll~~~gv-~v~p~-------~Ri~~~~-~ 392 (409)
T 4eu1_A 343 ACGSVHDWSHIERQVGMMAYT--GL-----------T----R----EQVELLRSEYHI-YMTLN-------GRAAVSG-L 392 (409)
T ss_dssp HTTCCSCCHHHHHSCSSEEEC--CC-----------C----H----HHHHHHHHHHCE-ECCTT-------CEEEGGG-C
T ss_pred hcCCCCCcceecCCceEEEEe--CC-----------C----H----HHHHHHHHcCCE-EEcCC-------CEEEEEe-c
Confidence 8731 55 3 555552 11 0 1 1233333 4465 45442 3888853 3
Q ss_pred CCHHHHHHHHHHHHHHH
Q 048643 479 TEERHVMVAWTMVQEQL 495 (506)
Q Consensus 479 tt~edi~~li~~l~~~~ 495 (506)
++++|++++++|+++.
T Consensus 393 -~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 393 -NSTNVEYVSQAIHNVT 408 (409)
T ss_dssp -CTTTHHHHHHHHHHHH
T ss_pred -CHhhHHHHHHHHHHHh
Confidence 4457999999998764
No 205
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.72 E-value=8.8e-17 Score=164.68 Aligned_cols=299 Identities=11% Similarity=0.029 Sum_probs=178.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCc
Q 048643 123 NWISSPAATELENIVMDWLGQMLK-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTH 201 (506)
Q Consensus 123 ~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H 201 (506)
.|...+...++++.+.+|+. .| .+.+ ..++++|+++++..++. + +. ++..|+++..+|
T Consensus 70 ~y~~~~g~~~lr~~la~~l~--~g~~~~~-------~v~~~~G~~~al~~~~~-~----~~-------~gd~Vl~~~p~y 128 (400)
T 3asa_A 70 GYGPDFGLPALRQKLSEDFY--RGFVDAK-------EIFISDGAKVDLFRLLS-F----FG-------PNQTVAIQDPSY 128 (400)
T ss_dssp CCCCTTCCHHHHHHHHHTTS--TTSSCGG-------GEEEESCHHHHHHHHHH-H----HC-------SSCEEEEEESCC
T ss_pred CCCCCCCCHHHHHHHHHHHH--cCCCCHH-------HEEEccChHHHHHHHHH-H----cC-------CCCEEEECCCCc
Confidence 34434456777776666543 46 4433 68999998888765332 1 11 455677888899
Q ss_pred hHHHHHHHHhCCCCCC-eEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHHHH
Q 048643 202 CALQKAAQIVGIDLKN-FRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVAKQ 277 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia~~ 277 (506)
.++..+++..|. + ++.+|.++++.+..|++ +. ..+.+|+++.++|+||.+-| +++|+++|++
T Consensus 129 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l~---~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 194 (400)
T 3asa_A 129 PAYLDIARLTGA---KEIIALPCLQENAFFPEFP---ED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIE 194 (400)
T ss_dssp HHHHHHHHHTTC---SEEEEEECCGGGTTCCCCC---TT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---cceEecccchhcCcccChh---hc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999998 8 99999875333344432 11 12446777789999999976 6778999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCC---CCCeeEEcCccccCC-CCcceEEEEeCchh------HHhhhcCCcccc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVE---GADSFSLNAHKWFFT-TLDCCCLWVKDPSA------LVSSLSTNPEYL 347 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~---~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~------l~~~~~~~~~yl 347 (506)
+|+++++|++|+++..- +.....+..+. ..+.+..+++|+++. ...+|++++++... +.........+
T Consensus 195 ~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~- 272 (400)
T 3asa_A 195 HEILILFDAAYSTFISD-PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLST- 272 (400)
T ss_dssp TTCEEEEECTTGGGCCC-TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHH-
T ss_pred cCCEEEEEchhhhhhcC-CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhcc-
Confidence 99999999999864321 11111111222 233667889999974 45689988765431 11111000000
Q ss_pred CCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c---ceEEEe-
Q 048643 348 KNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS---P---SAVMDK- 420 (506)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p---~~v~f~- 420 (506)
+. .+ ...+...++...+....++++.++..++++++.+.|++. +++ | +.+.++
T Consensus 273 ----------------~~-~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 332 (400)
T 3asa_A 273 ----------------TF-NG--ASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKP 332 (400)
T ss_dssp ----------------HC-CC--CCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEEC
T ss_pred ----------------Cc-cC--CChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEec
Confidence 00 00 112222233333322246677788888999999999887 676 3 456666
Q ss_pred ecCCCcccccccccchHHHHHHHHHHHHHHHHhc-CcEEEeeee-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 421 LKPKYENCHSQQLVTEEEAINEFNRELLESINAS-GKAYMTHAV-C--GGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~--~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
+... . + ..++.+.+.++ |+. +.+.. + .+..++|+++ .+++++|+++++.|+++.+
T Consensus 333 ~~~~-~---------~-------~~~~~~~l~~~~gv~-v~~g~~f~~~~~~~iRis~---~~~~e~i~~~l~~l~~~~~ 391 (400)
T 3asa_A 333 TQAN-I---------S-------DRDLFDFFLREYHIA-ITPGIGFGRSGSGFVRFSS---LGKREDILAACERLQMAPA 391 (400)
T ss_dssp CCTT-C---------C-------TTTHHHHHHHHHSEE-CEEGGGGCGGGTTCEEEEC---CSCHHHHHHHHHHHHC---
T ss_pred cCCC-C---------C-------HHHHHHHHHHhCCEE-EeChhHhCCCCCCEEEEEe---eCCHHHHHHHHHHHHHHHH
Confidence 4321 0 0 12345555543 664 44432 2 2356899995 3578899999999988876
Q ss_pred HHH
Q 048643 497 AFL 499 (506)
Q Consensus 497 ~l~ 499 (506)
+..
T Consensus 392 ~~~ 394 (400)
T 3asa_A 392 LQS 394 (400)
T ss_dssp ---
T ss_pred hhh
Confidence 543
No 206
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.72 E-value=3.1e-16 Score=160.75 Aligned_cols=225 Identities=12% Similarity=0.021 Sum_probs=155.1
Q ss_pred HHHHHHHcCCCCccccCCCCcEEE---cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC-CCchHHHHH------
Q 048643 138 MDWLGQMLKLPKSFLFSGNGGGVI---QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD-QTHCALQKA------ 207 (506)
Q Consensus 138 ~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~-~~H~s~~ka------ 207 (506)
.+.+++++|.+. .++ ++||++||..++.+... ++..|+++. ..|......
T Consensus 65 e~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------~GD~Vl~~~~~~y~~~~~~~~~~g~ 124 (409)
T 3jzl_A 65 ERVYATVFKTEA---------ALVRPQIISGTHAISTVLFGILR-----------PDDELLYITGQPYDTLEEIVGIRKQ 124 (409)
T ss_dssp HHHHHHHHTCSE---------EEEETTSCSHHHHHHHHHHHHCC-----------TTCEEEECSSSCCTTHHHHHTSSSS
T ss_pred HHHHHHHhCCCc---------EEEECCCccHHHHHHHHHHHhcC-----------CCCEEEEeCCCCcHhHHHHHhcccc
Confidence 356788888764 355 88999999887766532 566777776 777776643
Q ss_pred ----HHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----cCCCCCcccChhHHHHHHHH--
Q 048643 208 ----AQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATI----GTTAITAVDPLKPLCDVAKQ-- 277 (506)
Q Consensus 208 ----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~----gtt~tG~idpl~~I~~ia~~-- 277 (506)
++..|+ +++.+|.++ +|.+|+++|+++|++. +.+|+++. +++++|.+.|+++|+++|++
T Consensus 125 ~~~~l~~~G~---~~~~v~~~~--~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~ 193 (409)
T 3jzl_A 125 GQGSLKDFHI---GYSSVPLLE--NGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNIN 193 (409)
T ss_dssp SSSCTGGGTC---EEEECCCCT--TSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHC
T ss_pred hhhHHHHcCC---EEEEeCCCC--CCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhC
Confidence 355677 888998875 5799999999998653 44788887 99999999999999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC--cceEEEEeCchhHHhhhcC--CccccCCcccc
Q 048643 278 FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSALVSSLST--NPEYLKNKATE 353 (506)
Q Consensus 278 ~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~--~~~yl~~~~~~ 353 (506)
||+++|||++|+.+....... . .++|.++.++||+++.+. ..|+++.+ ++... .+.. ..+++..
T Consensus 194 ~~~~livD~a~~~~~~~~~p~-~-----~g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~-~l~~~~~~~~~g~---- 261 (409)
T 3jzl_A 194 PEVIVFVDNCYGEFVEYQEPP-E-----VGADIIAGSLIKNPGGGLAKTGGYIAGK-EALVD-LCGYRLTTPGIGR---- 261 (409)
T ss_dssp TTCEEEEECTTCTTTSSCCSG-G-----GTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHH-HHHHHHSCTTTGG----
T ss_pred CCCEEEEeCCcccccccCCcc-c-----cCCeEEEECccccCCccCCceEEEEEeC-HHHHH-HHHHHhccccccc----
Confidence 999999999998655322111 1 168999999999998753 23665554 44332 2221 1122211
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---c-----eEEEeec
Q 048643 354 SKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---S-----AVMDKLK 422 (506)
Q Consensus 354 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~-----~v~f~~~ 422 (506)
..+..... .|..++. ......++++..+++.++++.|+++ +++ | . +++|.+.
T Consensus 262 ------------~~g~~~~~--~~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~~~~~~~~~i~~i~l~ 323 (409)
T 3jzl_A 262 ------------EAGASLYS--LLEMYQG--FFLAPHVTAQAIKGARFTAAMLAEF-GVEADPVWDAPRTDLIQSVSFH 323 (409)
T ss_dssp ------------GCCCCTTC--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSCCEEECS
T ss_pred ------------cccccHHH--HHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCCccEEEEEEeC
Confidence 01111111 2444443 3456678889999999999999998 455 3 2 7778774
No 207
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.71 E-value=8.4e-15 Score=152.90 Aligned_cols=328 Identities=11% Similarity=0.021 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.+...++.++++++++.+.+ ..++++||++||..|+.+++.....+ |..+ +..+|......|-+..-+...
T Consensus 94 ~~~~~~la~~l~~~~~~~~~-------~v~~~~gGseA~~~al~~~~~~~~~~-g~~~-~~~vi~~~~~yhg~~~~~~~~ 164 (460)
T 3gju_A 94 TEASITLAKMIIDRAPKGMS-------RVYFGLSGSDANETNIKLIWYYNNVL-GRPE-KKKIISRWRGYHGSGVMTGSL 164 (460)
T ss_dssp CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCCCHHHhhc
Confidence 44566777888888765443 68999999999999999998743221 1111 234444555566554444444
Q ss_pred hCC---------CCCCeEEEecCCC---CCcccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---
Q 048643 211 VGI---------DLKNFRAIKTTKS---SSYGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 211 ~G~---------g~~~v~~v~~~~~---~~~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
.|. ....++.+|.... ++..++ +++|+++|++.. ...+.+|++....+++|.+-+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~ 242 (460)
T 3gju_A 165 TGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAG 242 (460)
T ss_dssp CCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTT
T ss_pred cCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHH
Confidence 332 1124666764320 111233 688998887521 123456777766777787655
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCC--
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTN-- 343 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~-- 343 (506)
+++|+++|++||+++++|++|.++......+.....++ ..|.++++ |.+... ...|+++.++. +.+.+...
T Consensus 243 ~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v~~~~~--i~~~~~~~~~ 317 (460)
T 3gju_A 243 YWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGVIVADR--VWQVLVQGSD 317 (460)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEEEECHH--HHHHHhcccc
Confidence 99999999999999999999987533221111111233 46777654 998776 47888887643 22233210
Q ss_pred -ccccCCccccCCCccCCCCccccCCCCCCchHHHHH---HHHhchhH-HHHHHHHHHHHHHHHHHHHHcCCCCc---c-
Q 048643 344 -PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLV---IRNYGVAN-LRHFLRSHVNMAKLFERLVASDKRVS---P- 414 (506)
Q Consensus 344 -~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~G~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~---p- 414 (506)
...+.. ..+-....+...++ |+.+..+. +++..+....+.+.|.+.+.+.|.+. +
T Consensus 318 ~~~~~~~----------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 381 (460)
T 3gju_A 318 KLGSLGH----------------GWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGD 381 (460)
T ss_dssp HHCSCSC----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEE
T ss_pred ccccccc----------------CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeee
Confidence 000100 00111123333333 44332333 22223333333444444445555444 2
Q ss_pred -ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 415 -SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 415 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.++.+.+........ .... ......++.+.+.++|+++ .+.. +..++|+++ ....++++|+++++.|++
T Consensus 382 g~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~l~~~Gv~v-~~~~--~~~~iRi~~-~~~~t~e~i~~~l~~l~~ 451 (460)
T 3gju_A 382 GMLAAVEFVADKDDRV----FFDA--SQKIGPQVATALAASGVIG-RAMP--QGDILGFAP-PLCLTREQADIVVSKTAD 451 (460)
T ss_dssp TTEEEEEECSBTTTTB----CCCG--GGCHHHHHHHHHHHTTEEC-EECS--SSCEEEECC-CTTCCHHHHHHHHHHHHH
T ss_pred eEEEEEEEccCccccc----cccc--hHHHHHHHHHHHHHCCeEE-ecCC--CCCEEEEEC-CCCCCHHHHHHHHHHHHH
Confidence 566666543210000 0000 0123456777888888743 3322 346899986 356788899999999999
Q ss_pred HHHHHHc
Q 048643 494 QLEAFLT 500 (506)
Q Consensus 494 ~~~~l~~ 500 (506)
+.+++..
T Consensus 452 ~l~~~~~ 458 (460)
T 3gju_A 452 AVKSVFA 458 (460)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9887754
No 208
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.71 E-value=5.8e-15 Score=154.59 Aligned_cols=322 Identities=11% Similarity=0.029 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.+...++.+.++++++.+.+ ..++++||++||..|+.++|.....+ |..+ ++.+|......|-...-+...
T Consensus 98 ~~~~~~lae~l~~~~~~~~~-------~v~~~~sGseA~~~aik~a~~~~~~~-g~~~-~~~ii~~~~~yHg~t~~~~~~ 168 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLN-------HVFFAGGGSEANDTNIRMVRTYWQNK-GQPE-KTVIISRKNAYHGSTVASSAL 168 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCcCCCccHHhhhc
Confidence 34555666788888765443 68999999999999999998754221 2111 234555555566444333333
Q ss_pred hCC--------CCCCeEEEecCC--C-CCcccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 VGI--------DLKNFRAIKTTK--S-SSYGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~G~--------g~~~v~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
.|. ....++.+|... . +++ +| +++|+++|++.. ...+.+|++....++.|.+-|
T Consensus 169 ~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~ 245 (472)
T 3hmu_A 169 GGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSY 245 (472)
T ss_dssp SCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTH
T ss_pred cCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHH
Confidence 221 112466676432 0 111 34 788988887531 123456777767777888877
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
|++|+++|++||+++++|++|.|+......+.....++ ..|.++++ |.++.. +..|+++.++. +.+.+.. ..
T Consensus 246 l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~~--i~~~~~~--~~ 318 (472)
T 3hmu_A 246 WPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCDE--VAHVIGK--DE 318 (472)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHTT--SC
T ss_pred HHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCcceEEEEECHH--HHHhccc--CC
Confidence 99999999999999999999987543221111112233 56777765 998766 47788887543 2334421 11
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHH-HHHHHHHHHHHcC---CCCc---c--ceE
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHV-NMAKLFERLVASD---KRVS---P--SAV 417 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~-~~a~~l~~~l~~~---~~~~---p--~~v 417 (506)
+.. ..+-...++...+++..+..-.-++++++.. ++.+++++.|+++ |.+. + .++
T Consensus 319 ~~~----------------~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~ 382 (472)
T 3hmu_A 319 FNH----------------GYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMA 382 (472)
T ss_dssp BCC----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEE
T ss_pred ccc----------------cCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceE
Confidence 110 0111123344444443332111124556666 6777777777654 3333 2 666
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.|.+....... . +... .......++.+.+.++|+++... | .++|++. ....++++|++++++|+++.++
T Consensus 383 ~i~~~~~~~~~---~-~~~~-~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p-~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 383 SIALTPNKASR---A-KFAS-EPGTIGYICRERCFANNLIMRHV----G-DRMIISP-PLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp EEEECSCGGGT---C-CBSS-CTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcccc---c-cccc-hhHHHHHHHHHHHHHCCcEEEec----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 66664321000 0 0000 00123456777888888754332 2 6899986 4567889999999999887766
Q ss_pred H
Q 048643 498 F 498 (506)
Q Consensus 498 l 498 (506)
+
T Consensus 452 ~ 452 (472)
T 3hmu_A 452 A 452 (472)
T ss_dssp H
T ss_pred H
Confidence 5
No 209
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.71 E-value=1.5e-15 Score=157.06 Aligned_cols=313 Identities=13% Similarity=0.016 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.+.+++.++.+.+ ..++++||++|+..++.+++... + ++.+|+.....|.+..-+....
T Consensus 85 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~a~~~~~~~~-------~-~~~vi~~~~~yhg~~~~~~~~~ 149 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLD-------RALLLSTGAESNEAAIRMAKLVT-------G-KYEIVGFAQSWHGMTGAAASAT 149 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCC-------EEEEESCHHHHHHHHHHHHHHHH-------T-CCEEEEETTCCCCSSHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCCChhHHhhc
Confidence 4455666788888886543 78999999999999998876421 0 2334445545665555444332
Q ss_pred CC--------CCCCeEEEecCCC--C--------CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hh
Q 048643 212 GI--------DLKNFRAIKTTKS--S--------SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LK 269 (506)
Q Consensus 212 G~--------g~~~v~~v~~~~~--~--------~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~ 269 (506)
+. -...++.++++.. . .+.+|+++|+++|++. ....+.+|+++...+++|.+-| ++
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~ 227 (433)
T 1zod_A 150 YSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYMA 227 (433)
T ss_dssp CSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHHH
T ss_pred CCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHH
Confidence 21 0125666665310 0 1235799999999753 1123445665544567897655 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
+|+++|++||+++++|++|+++............++ ..|.+++ .|+++.++..|++++++ +. .+.+... .+...
T Consensus 228 ~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s~--sK~~~~G~~ig~~~~~~-~~-~~~~~~~-~~~~~ 301 (433)
T 1zod_A 228 ALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILTL--SKTLGAGLPLAAIVTSA-AI-EERAHEL-GYLFY 301 (433)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CHHHHTTSSCEEEEECH-HH-HHHHHHT-TCCCC
T ss_pred HHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEEe--cccccCCCCeeEEEEhH-HH-HHhhccC-CCCCC
Confidence 999999999999999999986532211111111122 3566554 59998778899998865 22 2333211 01100
Q ss_pred ccccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---c--ceE
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS---P--SAV 417 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~---p--~~v 417 (506)
.+. ....+.. ..+++.+..+ ++.++..++.+++.+.|++ .+.+. + .++
T Consensus 302 -------------~t~----~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~ 361 (433)
T 1zod_A 302 -------------TTH----VSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLL 361 (433)
T ss_dssp -------------CTT----TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEE
T ss_pred -------------CCC----CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEE
Confidence 000 1122322 3344433233 3456666777778777765 34433 2 566
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVC-GGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+.+....... . . + .....++.+.+.+.|+. +.+... .+..++|+++ +...++++|+++++.|+++.+
T Consensus 362 ~i~~~~~~~~~---~-~-~----~~~~~~~~~~l~~~Gv~-v~~~~~~~~~~~lRi~~-~~~~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 362 GVEIVKDRRTK---E-P-A----DGLGAKITRECMNLGLS-MNIVQLPGMGGVFRIAP-PLTVSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp EEEEEEETTTT---E-E-C----TTHHHHHHHHHHHTTEE-CCEECCTTSCCEEEECC-CTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcccc---C-C-C----hHHHHHHHHHHHHCCCe-EeccCCCCCCCEEEEEC-CcCCCHHHHHHHHHHHHHHHH
Confidence 66654210000 0 0 0 01235577777777864 444332 2246899987 456788999999999999876
Q ss_pred HH
Q 048643 497 AF 498 (506)
Q Consensus 497 ~l 498 (506)
++
T Consensus 431 ~~ 432 (433)
T 1zod_A 431 RA 432 (433)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 210
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.71 E-value=6.7e-15 Score=153.24 Aligned_cols=323 Identities=11% Similarity=0.042 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+...++.+|++++++.+. ..++++|||+||..|+.+++...... |.. .++.+|......|....-+..
T Consensus 89 ~~~~~~~la~~l~~~~~~~~--------~v~~~~ggseA~~~al~~~~~~~~~~-g~~-~~~~vi~~~~~yhg~~~~~~~ 158 (452)
T 3n5m_A 89 SHEPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYYAQK-GEP-HRYKFMSRYRGYHGNTMATMA 158 (452)
T ss_dssp EEHHHHHHHHHHHHHHTSCE--------EEEEESSHHHHHHHHHHHHHHHHHTT-TCT-TCCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCc--------eEEEeCchHHHHHHHHHHHHHHHHhc-CCC-CCCEEEEECCCcCCCCHHHHh
Confidence 35666778899999987543 37999999999999999988542211 110 133455555555654444433
Q ss_pred HhCCC---------CCCeEEEecCCCCC----------cccCHHHHHHHHHHHHhcCCccEEEEEecc-CCCCCcccC--
Q 048643 210 IVGID---------LKNFRAIKTTKSSS----------YGLSPDSLLTQINLDVEAGLVPLFLCATIG-TTAITAVDP-- 267 (506)
Q Consensus 210 ~~G~g---------~~~v~~v~~~~~~~----------~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~idp-- 267 (506)
..|.. ...+..++....-. +..++++|+++|++. ....+.+|++... .+ +|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~ 235 (452)
T 3n5m_A 159 ATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQ 235 (452)
T ss_dssp SCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCT
T ss_pred cCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCH
Confidence 33321 11355555421100 111289999999732 1123456666666 68 998876
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcC--
Q 048643 268 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLST-- 342 (506)
Q Consensus 268 --l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~-- 342 (506)
+++|+++|++||+++++|++|.++......+.....++ ..|.+++ .|.++.. ++.|+++.++. +.+.+..
T Consensus 236 ~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~ig~~~~~~~--i~~~~~~~~ 310 (452)
T 3n5m_A 236 DYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITM--AKGITSAYLPLSATAVKRE--IYEAFKGKG 310 (452)
T ss_dssp THHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH--HHGGGCSSS
T ss_pred HHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEee--cccccCCCcceEEEEECHH--HHHHHhhcc
Confidence 99999999999999999999986532221111111223 4677765 4888776 77888887543 3333422
Q ss_pred -CccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc---c
Q 048643 343 -NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS---P 414 (506)
Q Consensus 343 -~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~---p 414 (506)
...++.. .+-...++...+++..+..-.-++++++..++.+++++.|.+ .|.+. +
T Consensus 311 ~~~~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 373 (452)
T 3n5m_A 311 EYEFFRHI-----------------NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRG 373 (452)
T ss_dssp TTCSCCCC-----------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCCCcccc-----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 0111110 111123344444443332101123455555666666666654 44433 2
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeee--ECCEEEEEEEecCCCCCHHHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAV--CGGIYAMRFAVGATLTEERHVMVAWTM 490 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lR~~~~~~~tt~edi~~li~~ 490 (506)
.++.+.+...... ..... .....++.+.+.++|+++..... ..+..++|+++ +...++++|+++++.
T Consensus 374 ~g~~~~i~~~~~~~~----~~~~~----~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~l~~ 444 (452)
T 3n5m_A 374 KGLLVGIELVNDKET----KEPID----NDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAP-PLVISSEEIAFVIGT 444 (452)
T ss_dssp SSSCEEEEEEEETTT----TEECC----HHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECC-CTTCCHHHHHHHHHH
T ss_pred EEEEEEEEEecCCcc----cCCCC----HHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEEC-CCCCCHHHHHHHHHH
Confidence 4455544221000 00000 12234677778888875433221 11357899987 456788899999999
Q ss_pred HHHHHH
Q 048643 491 VQEQLE 496 (506)
Q Consensus 491 l~~~~~ 496 (506)
|+++.+
T Consensus 445 l~~~l~ 450 (452)
T 3n5m_A 445 LKTAME 450 (452)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 998764
No 211
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.70 E-value=8.6e-15 Score=152.78 Aligned_cols=320 Identities=10% Similarity=0.039 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.+...++.+|++++++.+.+ ..++++||++||..|+.+++.....+ |..+ ++.+|......|....-+...
T Consensus 93 ~~~~~~la~~l~~~~~~~~~-------~v~~~~ggseA~~~al~~~~~~~~~~-g~~~-~~~vi~~~~~yhg~~~~~~~~ 163 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFD-------RVFYTNSGSESVDTMIRMVRRYWDVQ-GKPE-KKTLIGRWNGYHGSTIGGASL 163 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCccHHHHhh
Confidence 45666778899999876544 68999999999999999998753221 1111 233444455556444434333
Q ss_pred hCCC---------CCCeEEEecCC--C-CCcccC--------HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---
Q 048643 211 VGID---------LKNFRAIKTTK--S-SSYGLS--------PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP--- 267 (506)
Q Consensus 211 ~G~g---------~~~v~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp--- 267 (506)
.|.. ...+..++... . +++ +| +++|+++|++... ..+.+|++....++.|.+-|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~--~~~~~vi~ep~~~~~G~~~~~~~ 240 (459)
T 4a6r_A 164 GGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA--DKVAAFVGEPIQGAGGVIVPPAT 240 (459)
T ss_dssp SCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBTTTTCBCCCTT
T ss_pred cCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECCccCCCCcccCCHH
Confidence 3321 11455566432 0 112 45 7889988875211 13456666666677788777
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCcc
Q 048643 268 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPE 345 (506)
Q Consensus 268 -l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~ 345 (506)
+++|+++|++||+++++|++|.++......+.....++ ..|.++++ |.++.. ...|+++.++. . .+.+.....
T Consensus 241 ~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v~~~~~-i-~~~~~~~~~ 315 (459)
T 4a6r_A 241 YWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAVFVGKR-V-AEGLIAGGD 315 (459)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEECHH-H-HHHHHHHCT
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccceeeCHH-H-HHHhhcCCC
Confidence 99999999999999999999987533221111112233 46777765 988765 57888877543 2 223321000
Q ss_pred ccCCccccCCCccCCCCccccCCCCCCchHHHHH---HHHhchhHHHHHHHHHH-HHHHHHHHHH----HcCCCCc---c
Q 048643 346 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWLV---IRNYGVANLRHFLRSHV-NMAKLFERLV----ASDKRVS---P 414 (506)
Q Consensus 346 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~G~~g~~~~i~~~~-~~a~~l~~~l----~~~~~~~---p 414 (506)
+.... +. ...++...++ |+.+..+. ++++.. ++.+++++.| .+.|.+. +
T Consensus 316 ~~~~~-------------t~----~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 375 (459)
T 4a6r_A 316 FNHGF-------------TY----SGHPVCAAVAHANVAALRDEG---IVQRVKDDIGPYMQKRWRETFSRFEHVDDVRG 375 (459)
T ss_dssp THHHH-------------HH----CSCHHHHHHHHHHHHHHHHTC---HHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred cccCC-------------CC----CCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 00000 00 1123333333 33332333 344444 4455555555 4454444 2
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQ 492 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~ 492 (506)
.++.|.+....... . .... ......++.+.+.++|+++ .+. | .++|+++ +...++++|+++++.|+
T Consensus 376 ~g~~~~~~~~~~~~~~---~-~~~~--~~~~~~~~~~~l~~~Gv~v-~~~---g-~~iRi~~-~~~~t~e~i~~~l~~l~ 443 (459)
T 4a6r_A 376 VGMVQAFTLVKNKAKR---E-LFPD--FGEIGTLCRDIFFRNNLIM-RAC---G-DHIVSAP-PLVMTRAEVDEMLAVAE 443 (459)
T ss_dssp ETTEEEEEECSBTTTT---B-CCSS--TTHHHHHHHHHHHHTTEEC-EEE---T-TEEEECC-CTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEEEecCcccc---c-cccc--hHHHHHHHHHHHHHCCeEE-ecC---C-CEEEEEC-CCCCCHHHHHHHHHHHH
Confidence 56666654321000 0 0000 0123456777888888754 332 2 6899987 46678899999999999
Q ss_pred HHHHHHH
Q 048643 493 EQLEAFL 499 (506)
Q Consensus 493 ~~~~~l~ 499 (506)
++.+++.
T Consensus 444 ~~l~~~~ 450 (459)
T 4a6r_A 444 RCLEEFE 450 (459)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887764
No 212
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.70 E-value=2.1e-15 Score=157.28 Aligned_cols=310 Identities=9% Similarity=-0.056 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
+...++.++++++++.+.+ ..++++|||+||..|+.+++.....+ |..+ +..+|......|-+..-+....
T Consensus 118 ~~~~~L~e~la~~~~~~~~-------~v~~~~sGseA~~~Alk~a~~~~~~~-g~~g-~~~ii~~~~~yhg~~~~~~~~~ 188 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLD-------TVFFSDSGSVSVEVAAKMALQYWRGR-GLPG-KRRLMTWRGGYHGDTFLAMSIC 188 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHTTS
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCCC-CceEEEEcCCcCCccHHhhccc
Confidence 4455677889999876544 68999999999999999998753322 1111 2244545555554433332221
Q ss_pred C----------CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-cCCCCCcccC----hhHHHHHHH
Q 048643 212 G----------IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATI-GTTAITAVDP----LKPLCDVAK 276 (506)
Q Consensus 212 G----------~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~-gtt~tG~idp----l~~I~~ia~ 276 (506)
+ -....+..+|....+....|+++|+++|++.. ..+.+|++.. ..+++|.+-| +++|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~ 265 (457)
T 3tfu_A 189 DPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICR 265 (457)
T ss_dssp CCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHH
T ss_pred CCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHH
Confidence 1 00114455555432223468999999998532 1345677776 6788898865 999999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC-cceEEEEeCchhHHhhhcC-CccccCCccccC
Q 048643 277 QFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSALVSSLST-NPEYLKNKATES 354 (506)
Q Consensus 277 ~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~ 354 (506)
+||+++++|++|.++......+.....++ ..|.+++ .|.++..+ ..|+++.++. +.+.+.. .+.-+..
T Consensus 266 ~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~--sK~l~gG~~~lG~v~~~~~--i~~~~~~~~~~~~~~----- 335 (457)
T 3tfu_A 266 RYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCV--GKALTGGYLSLAATLCTAD--VAHTISAGAAGALMH----- 335 (457)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH--HHHHHHHSSSCSCCC-----
T ss_pred HcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEE--ChhhhCCCcceEEEEEcHH--HHHHhhccCCCceeE-----
Confidence 99999999999987532211111111233 5677765 49887764 7888887653 2233321 0110000
Q ss_pred CCccCCCCccccCCCCCCchHHHHH---HHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc---c--ceEEEeecC
Q 048643 355 KQVVDYKDWQITLSRRFRSLKLWLV---IRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS---P--SAVMDKLKP 423 (506)
Q Consensus 355 ~~~~~~~~~~~~~sr~~~al~~~~~---l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~---p--~~v~f~~~~ 423 (506)
..+-...++...++ |+.+..+ ++.++..++.+++++.|+++ |.+. + .++.|.+..
T Consensus 336 -----------~~t~~~n~~a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~ 401 (457)
T 3tfu_A 336 -----------GPTFMANPLACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDR 401 (457)
T ss_dssp -----------CCTTTTCHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESS
T ss_pred -----------ecCCCcCHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECC
Confidence 00111133433333 4433333 45666777888888888765 3333 2 566666643
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
.. + ..++.+.+.++|++ +.+. ..++|++. ....++++|++++++|+++.+++..
T Consensus 402 ~~---------------~--~~~~~~~l~~~Gv~-v~~~----~~~lRi~p-~~~~t~eei~~~l~~L~~~l~~~~~ 455 (457)
T 3tfu_A 402 PV---------------D--LAVATPAALDRGVW-LRPF----RNLVYAMP-PYICTPAEITQITSAMVEVARLVGS 455 (457)
T ss_dssp CC---------------C--HHHHHHHHHHTTEE-CCCB----TTEEEECC-CTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred cc---------------c--HHHHHHHHHHCCeE-EEec----CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 21 0 24567777788864 4432 25799886 3566889999999999999877643
No 213
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.70 E-value=8.6e-16 Score=158.10 Aligned_cols=226 Identities=10% Similarity=0.032 Sum_probs=153.4
Q ss_pred HHHHHHHcCCCCccccCCCCcEEE---cCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC-CCchHHH--------
Q 048643 138 MDWLGQMLKLPKSFLFSGNGGGVI---QGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD-QTHCALQ-------- 205 (506)
Q Consensus 138 ~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~-~~H~s~~-------- 205 (506)
.+.+++++|.+. .++ ++||++||..++.+... ++..|+++. ..|....
T Consensus 80 e~~lA~l~g~e~---------alv~p~~~sGt~A~~~al~all~-----------pGD~Vl~~~~~~y~~~~~~~g~~~~ 139 (427)
T 3hvy_A 80 DRVYANIFNTES---------AFVRPHFVNGTHAIGAALFGNLR-----------PNDTMMSICGMPYDTLHDIIGMDDS 139 (427)
T ss_dssp HHHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHTCC-----------TTCEEEECSSSCCGGGHHHHTCCTT
T ss_pred HHHHHHHhCCCc---------eEEeCCCCcHHHHHHHHHHHhcC-----------CCCEEEEeCCCCchhHHHHhccccc
Confidence 356888888763 356 78899999877765432 567777776 6665544
Q ss_pred ---HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----cCCCCCcccChhHHHHHHHH-
Q 048643 206 ---KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATI----GTTAITAVDPLKPLCDVAKQ- 277 (506)
Q Consensus 206 ---ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~----gtt~tG~idpl~~I~~ia~~- 277 (506)
..++..|+ +++.+|.+ ++.+|+++|++++++. ..+.+|+++. +++++|.+.|+++|+++|++
T Consensus 140 ~~~~~l~~~G~---~~~~v~~~---~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~ 209 (427)
T 3hvy_A 140 KKVGSLREYGV---KYKMVDLK---DGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREV 209 (427)
T ss_dssp CCSCCTGGGTC---EEEECCCB---TTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHcCC---EEEEecCC---CCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHh
Confidence 34455688 88888873 5699999999999741 1245788887 89999999999999999999
Q ss_pred -hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCC--cceEEEEeCchhHHhhhcC--CccccCCccc
Q 048643 278 -FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSALVSSLST--NPEYLKNKAT 352 (506)
Q Consensus 278 -~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~--~~~yl~~~~~ 352 (506)
+|++++||+||+.+........ .++|.++.++||+++.+. ..|+++.+ ++.. +.+.. ....+
T Consensus 210 ~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li-~~l~~~~~~~~~----- 276 (427)
T 3hvy_A 210 NENVIVFVDNCYGEFVEEKEPTD------VGADIIAGSLIKNIGGGIATTGGYIAGK-EEYV-TQATFRVTVPGI----- 276 (427)
T ss_dssp CSSSEEEEECTTCTTTSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHH-HHHHHHHSCTTT-----
T ss_pred CCCCEEEEECCccccccCCCCcc------cCCeEEEECCcccccccccceEEEEEEC-HHHH-HHHHHHhhcCCc-----
Confidence 8999999999976653221111 168999999999998732 23666654 4333 22211 11111
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---c-----eEEEeec
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---S-----AVMDKLK 422 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~-----~v~f~~~ 422 (506)
+...+-.+. ..|..++. ..-...++++..+++.++++.|+++ +++ | . +++|.+.
T Consensus 277 -----------g~~~~~~~~--~a~~~~~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~~~~~~~~li~~~~l~ 340 (427)
T 3hvy_A 277 -----------GGECGSTFG--VMRSLYEG--LFMAPHVTIEAVKGAVFCARIMELA-GFDVLPKYNDKRTDIIQAIKFN 340 (427)
T ss_dssp -----------GGGCCCCTT--CHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSEEEEECS
T ss_pred -----------ccccCCCHH--HHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCCceEEEEEeCC
Confidence 001111111 13555543 3455678889999999999999998 445 3 3 7788774
No 214
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.69 E-value=1.5e-14 Score=150.63 Aligned_cols=319 Identities=10% Similarity=0.008 Sum_probs=175.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+...++.++++++++.+.. ...+|++|||+||..|+.++|... + ++.+|......|-...-+..
T Consensus 105 ~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~alk~a~~~~----g----~~~ii~~~~~yhg~~~~~~~ 170 (453)
T 4ffc_A 105 PYEQYVQVAELLNALTPGDHD------KRTALFNSGAEAVENAIKVARLAT----G----RPAVVAFDNAYHGRTNLTMA 170 (453)
T ss_dssp CCHHHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH----C----CCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCC------cEEEEeCcHHHHHHHHHHHHHHhc----C----CCEEEEEcCccCCcchHHHh
Confidence 345666778999999875421 168999999999999999888631 0 23455555556655444444
Q ss_pred HhCCC----------CCCeEEEecCCC--CCcccC-HHHHHHHHHHHHh--cCCccEEEEEeccCCCCCcccC----hhH
Q 048643 210 IVGID----------LKNFRAIKTTKS--SSYGLS-PDSLLTQINLDVE--AGLVPLFLCATIGTTAITAVDP----LKP 270 (506)
Q Consensus 210 ~~G~g----------~~~v~~v~~~~~--~~~~~d-~~~L~~~i~~~~~--~g~~p~~Vv~t~gtt~tG~idp----l~~ 270 (506)
..|.. ...+..+|.... +.+.++ .+.++..++.-.+ ....+.+|++.-.....|.+-| +++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~ 250 (453)
T 4ffc_A 171 LTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLAT 250 (453)
T ss_dssp HCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHH
Confidence 43321 114666776420 111222 2333322221111 1122445555544445566655 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCc
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNK 350 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 350 (506)
|+++|++||+++++|++|.++......+.....++ ..|.++++ |.++..+..|+++.+.. +.+.+... . .
T Consensus 251 l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~--i~~~~~~~---~-~- 320 (453)
T 4ffc_A 251 LTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLSAVTGRAE--LMDAVYAG---G-L- 320 (453)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEEEEEHH--HHTTSCTT---S-S-
T ss_pred HHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeEEEEECHH--HHhhhccc---C-c-
Confidence 99999999999999999976533221111111222 45666654 99987788898877532 22222110 0 0
Q ss_pred cccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH----cCCCCc---c--ceEEEee
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVA----SDKRVS---P--SAVMDKL 421 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~---p--~~v~f~~ 421 (506)
..+-...++...+++..+..-.-.+++++..++.+++++.|. +.|.+. + .++.+.+
T Consensus 321 ---------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 385 (453)
T 4ffc_A 321 ---------------GGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEI 385 (453)
T ss_dssp ---------------CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEE
T ss_pred ---------------CCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEE
Confidence 011111334433343333210012344445555555555554 445444 2 5666665
Q ss_pred cCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHc
Q 048643 422 KPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFLT 500 (506)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~~ 500 (506)
..... . .+ . .....++.+.+.++|+++ .+.... ..++|+++ +...++++|+++++.|+++.+++.+
T Consensus 386 ~~~~~-~----~~-~----~~~~~~~~~~l~~~Gv~v-~~~~~~-~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 386 VKPGT-L----EP-D----AALTKSIAAEALSQGVLI-LTCGTF-GNVIRLLP-PLVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp BCTTS-C----CB-C----HHHHHHHHHHHHHTTEEC-CEECTT-SCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred ecCcc-c----CC-C----HHHHHHHHHHHHhCCCEE-ecCCCC-CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 32100 0 00 1 233566778888888754 333222 25799987 4567888999999999999887654
No 215
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.69 E-value=1.4e-14 Score=150.90 Aligned_cols=314 Identities=12% Similarity=0.045 Sum_probs=177.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+...++.++++++++.+.. ...+|++|||+||..|+.++|... + ++.+|......|-...-+..
T Consensus 102 ~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~----g----~~~ii~~~~~yhG~~~~~~~ 167 (451)
T 3oks_A 102 PYEGYVAVCEQLNRLTPVRGD------KRSALFNSGSEAVENAVKIARSHT----H----KPAVVAFDHAYHGRTNLTMA 167 (451)
T ss_dssp CCHHHHHHHHHHHHHSSCCSS------EEEEEESSHHHHHHHHHHHHHHHH----C----CCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhCCcCCC------CEEEEeCcHHHHHHHHHHHHHHhc----C----CCeEEEEcCCcCCccHHHHH
Confidence 345666778899999864321 168999999999999999988642 0 23445455555644444433
Q ss_pred HhCCC----------CCCeEEEecCCCC--------C---cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-
Q 048643 210 IVGID----------LKNFRAIKTTKSS--------S---YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP- 267 (506)
Q Consensus 210 ~~G~g----------~~~v~~v~~~~~~--------~---~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp- 267 (506)
..|-. ...++.+|....- . ..-+++.++++|++.. .+..+.+|++.-..+..|.+-|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~ 246 (451)
T 3oks_A 168 LTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPA 246 (451)
T ss_dssp HCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCC
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCC
Confidence 32210 1156777764100 0 0123555556665422 1123455666555555677755
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCc
Q 048643 268 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNP 344 (506)
Q Consensus 268 ---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~ 344 (506)
+++|+++|++||+++++|++|.++......+.....++ ..|.+++ .|.++..+..|+++.+.. +.+.+...
T Consensus 247 ~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~iG~v~~~~~--~~~~~~~~- 320 (451)
T 3oks_A 247 DGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVT--AKGIAGGLPLSAVTGRAE--IMDSPHVS- 320 (451)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCEEEEEEHH--HHTCSCTT-
T ss_pred HHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeee--hhhhhCCcceEEEEECHH--HHhhhcCC-
Confidence 99999999999999999999986533221111111222 4677665 499988788898877532 22222110
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH----cCCCCc---c--c
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVA----SDKRVS---P--S 415 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~---p--~ 415 (506)
. . ..+-...++...+++..+..-.-.+++++..++.+++++.|. +.|.+. + .
T Consensus 321 --~-~----------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~ 381 (451)
T 3oks_A 321 --G-L----------------GGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGA 381 (451)
T ss_dssp --S-B----------------CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT
T ss_pred --C-c----------------CCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeE
Confidence 0 0 011112334444444333210012344555556666666554 445443 2 5
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
++.+.+..... . .+ . .....++.+.+.++|+++..... . ..++|+++ +...++++|+++++.|+++.
T Consensus 382 ~~~~~~~~~~~-~----~~-~----~~~~~~~~~~l~~~Gv~v~~~~~-~-~~~iRi~~-~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 382 MIAMELVKAGT-T----EP-D----ADLTKALCAGAHAAGVIVLSCGT-Y-GNVVRFLP-PLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp EEEEEEBSTTS-C----CB-C----HHHHHHHHHHHHHTTEECEEECT-T-SCEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCcc-C----CC-C----HHHHHHHHHHHHhCCcEEecCCC-C-CCEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 66666543100 0 00 0 23346677888888875433321 1 25799987 45678889999999999876
Q ss_pred H
Q 048643 496 E 496 (506)
Q Consensus 496 ~ 496 (506)
+
T Consensus 449 ~ 449 (451)
T 3oks_A 449 R 449 (451)
T ss_dssp H
T ss_pred h
Confidence 5
No 216
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.68 E-value=7e-15 Score=152.02 Aligned_cols=305 Identities=11% Similarity=0.002 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
...++.+.+++.++ ..+ ..++++|||+||..|+.+++... . ++.+|..+...|.+...++...|
T Consensus 94 ~~~~l~~~la~~~~-~~~-------~v~~~~~Gsea~~~ai~~a~~~~--~------~~~vi~~~~~yhg~~~~~~~~~g 157 (429)
T 3k28_A 94 IENKLAKLVIERVP-SIE-------IVRMVNSGTEATMSALRLARGYT--G------RNKILKFIGCYHGHGDSLLIKAG 157 (429)
T ss_dssp HHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH--T------CCEEEEEETCCCCSCGGGCSSCC
T ss_pred HHHHHHHHHHHhCC-CCC-------EEEEeCChHHHHHHHHHHHHHhh--C------CCEEEEECCCcCCCcHHHHHhcC
Confidence 33445567777775 222 68999999999999999987641 0 23445455555644433332223
Q ss_pred CCCC----------------CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHH
Q 048643 213 IDLK----------------NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLC 272 (506)
Q Consensus 213 ~g~~----------------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~ 272 (506)
.+.. .++.+|. -|+++|++++++... .+.+|++....+++|.+.| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~ 227 (429)
T 3k28_A 158 SGVATLGLPDSPGVPEGVAKNTITVAY-------NDLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPGFLEGLR 227 (429)
T ss_dssp TTC-----CCCTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHH
T ss_pred CcccccCCCCcCCCCCcccCceeecCC-------CCHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHHHHHHHH
Confidence 2110 2222221 189999999976421 2456777766777888888 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++|++||+++|+|++|.++ ...........++ ..|.+++ .|.++.++..|+++.++ + +.+.+.......
T Consensus 228 ~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~-~-~~~~~~~~~~~~----- 296 (429)
T 3k28_A 228 EVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCL--GKVIGGGLPVGAYGGKA-E-IMRQVAPSGPIY----- 296 (429)
T ss_dssp HHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECH-H-HHTTBTTTSSBC-----
T ss_pred HHHHHcCCEEEEecccccc-ccCcchHHHHhCC-CCceehh--hhhhcCCCCeEEEEEcH-H-HHhhhccCCCcc-----
Confidence 9999999999999999765 2211111111222 4566665 49998778889887754 2 222332110000
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc--c---ceEEEeecC
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS--P---SAVMDKLKP 423 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~--p---~~v~f~~~~ 423 (506)
...+.....+...+++..+.... ++++++..++.+++.+.|++. +.+. + .++.|.+..
T Consensus 297 ------------~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~ 363 (429)
T 3k28_A 297 ------------QAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTD 363 (429)
T ss_dssp ------------CCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSS
T ss_pred ------------ccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEec
Confidence 00111223444455554442211 567777888888888888653 3332 2 666666543
Q ss_pred CCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 424 KYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
.....+......+ .....++.+.+.++|+. +.+. +...+|++ ...++++|+++++.|+++.+++
T Consensus 364 ~~~~~~~~~~~~~----~~~~~~~~~~l~~~Gv~-v~~~---~~~~~r~~---~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 364 EPVINYDAAKSSN----LQFFAAYYREMVEQGVF-LPPS---QFEGLFLS---TVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp SCCCSHHHHTTSC----HHHHHHHHHHHHHTTEE-CCSS---TTSCBCCC---TTCCHHHHHHHHHHHHHHHHTC
T ss_pred CCccccccccccc----HHHHHHHHHHHHHCCeE-EecC---CCCCEEEE---CCCCHHHHHHHHHHHHHHHHHH
Confidence 2100000000000 12346677788888864 4432 23456774 4568899999999999987654
No 217
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.68 E-value=6.5e-16 Score=159.63 Aligned_cols=231 Identities=12% Similarity=0.043 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC-CCchHHHHHHHH--
Q 048643 134 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD-QTHCALQKAAQI-- 210 (506)
Q Consensus 134 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~-~~H~s~~ka~~~-- 210 (506)
..++.+++++++|.+... .-+++++||+||..++.+... ++..|+++. ..|.++...+++
T Consensus 67 ~~~l~~~la~~~g~~~~~------~~i~~~sGt~Ai~~al~al~~-----------~Gd~Vl~~~~~~y~~~~~~~~l~g 129 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL------VRPQIISGTHAISTALFGILR-----------PGDELLYITGKPYDTLEEIVGVRG 129 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC------CBTTSCSHHHHHHHHHHTTCC-----------TTCEEEECSSSCCTTHHHHTTSSS
T ss_pred HHHHHHHHHHHhCCCccc------ccceeeCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCchhHHHHHhhcc
Confidence 456678899999987642 112245779999887765432 556677776 788888876643
Q ss_pred --------hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----cCCCCCcccChhHHHHHHHH-
Q 048643 211 --------VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATI----GTTAITAVDPLKPLCDVAKQ- 277 (506)
Q Consensus 211 --------~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~----gtt~tG~idpl~~I~~ia~~- 277 (506)
.|+ +++.+|.++ +|.+|+++|+++|++. +.+|+++. +++.+|.++|+++|+++|++
T Consensus 130 ~~~~~~~~~G~---~~~~v~~~~--~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~ 198 (431)
T 3ht4_A 130 KGVGSFKEYNI---GYNAVPLTE--GGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEI 198 (431)
T ss_dssp CSSSCSGGGTC---EEEECCBCT--TSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred cccchHHHcCC---EEEEeCCCC--CCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhh
Confidence 677 899999875 4799999999998753 44777776 77888889999999999999
Q ss_pred -hCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCC---CCcceEEEEeCchhHHhhhcC--CccccCCcc
Q 048643 278 -FGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFT---TLDCCCLWVKDPSALVSSLST--NPEYLKNKA 351 (506)
Q Consensus 278 -~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~---p~~~g~~~~r~~~~l~~~~~~--~~~yl~~~~ 351 (506)
+|++++||++|+.+....... . . ++|.++.++||+++. |.| |+++.+ ++.. +.+.. ....+.
T Consensus 199 ~~~~~livDea~~~~~~~~~~~-~----~-g~Di~~~S~sK~lgg~~~~~G-G~v~~~-~~li-~~l~~~~~~~~~g--- 266 (431)
T 3ht4_A 199 KPDVVVFVDNCYGEFIEEQEPC-H----V-GADLMAGSLIKNPGGGIVKTG-GYIVGK-EQYV-EACAYRLTSPGIG--- 266 (431)
T ss_dssp CTTCEEEEECTTCTTSSSCCGG-G----T-TCSEEEEETTSGGGTTTCSSC-EEEEEC-HHHH-HHHHHHHSCTTTT---
T ss_pred CCCCEEEEeCCChhhccCCCcc-c----c-CCeEEEcCccccCCCCCCCce-EEEEec-HHHH-HHHHHHhccCCcc---
Confidence 999999999998775422211 1 1 589999999999765 444 777665 3332 22211 111110
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc--c---c-----eEEEee
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS--P---S-----AVMDKL 421 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~--p---~-----~v~f~~ 421 (506)
...+-.+.. .|..++ +.+....++++..++++++++.|++. +++ | . ++.|.+
T Consensus 267 -------------~~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l 328 (431)
T 3ht4_A 267 -------------AEAGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQF 328 (431)
T ss_dssp -------------TSCSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEEC
T ss_pred -------------cccCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEe
Confidence 011111111 133333 33445678888999999999999987 444 3 2 677776
Q ss_pred c
Q 048643 422 K 422 (506)
Q Consensus 422 ~ 422 (506)
.
T Consensus 329 ~ 329 (431)
T 3ht4_A 329 D 329 (431)
T ss_dssp C
T ss_pred C
Confidence 4
No 218
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.67 E-value=7.6e-15 Score=152.75 Aligned_cols=308 Identities=10% Similarity=-0.024 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHcC-CCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh---hcccCCCCeEEEeCC-CCchHHHH
Q 048643 132 ELENIVMDWLGQMLK-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK---IGRENISKLVVYGSD-QTHCALQK 206 (506)
Q Consensus 132 ~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~---~~~~~~~~~~v~~s~-~~H~s~~k 206 (506)
+...++.+.++++++ .+.+ ..++++|||+||..|+.++|.....+ .|..+.++..|++.. ..|.+..-
T Consensus 101 ~~~~~la~~la~~~~~~~~~-------~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~ 173 (449)
T 2cjg_A 101 VAMARFVETFARVLGDPALP-------HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGY 173 (449)
T ss_dssp HHHHHHHHHHHHHHCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTT
T ss_pred HHHHHHHHHHHHhcCCCCCC-------EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccc
Confidence 334455566777776 2222 68999999999999999887432211 011111144455444 45533222
Q ss_pred HHHH--------hCCCC--CCeEEEecCC--CCC------cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC-
Q 048643 207 AAQI--------VGIDL--KNFRAIKTTK--SSS------YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP- 267 (506)
Q Consensus 207 a~~~--------~G~g~--~~v~~v~~~~--~~~------~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp- 267 (506)
+... .|+.. ..++.+|.+. ... ...++++|+++|++. +..+.+|+++...+++|.+-+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~ 250 (449)
T 2cjg_A 174 TLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFR 250 (449)
T ss_dssp GGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECC
T ss_pred hhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCC
Confidence 2111 22211 2567777653 110 135677798888642 123456777666678897766
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCc
Q 048643 268 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNP 344 (506)
Q Consensus 268 ---l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~ 344 (506)
+++|+++|++||+++++|++|.++......+.....++ ..|.++++ |++ | +|++++++ +. .+.+. +
T Consensus 251 ~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l--~--iG~~~~~~-~~-~~~l~--~ 319 (449)
T 2cjg_A 251 PEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT--Q--VCGVMAGR-RV-DEVAD--N 319 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG--S--SEEEEECG-GG-GGSTT--C
T ss_pred HHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc--c--EEEEEECH-HH-hhhhh--h
Confidence 99999999999999999999986433211111111133 46777654 988 4 78887764 22 22211 0
Q ss_pred cccCCccccCCCccCCCCccccCCCCCCchHHH---HHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCC-Cc---
Q 048643 345 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLW---LVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKR-VS--- 413 (506)
Q Consensus 345 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~-~~--- 413 (506)
.++... ....+. ....+... .+++.+.. .++.++..++.+++.+.|++ .|. +.
T Consensus 320 ~~~~~~---------~~~~t~----~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~ 383 (449)
T 2cjg_A 320 VFAVPS---------RLNSTW----GGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDPR 383 (449)
T ss_dssp TTTSTT---------SSCCSS----SSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEE
T ss_pred cccCCc---------ccccCC----CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEe
Confidence 011000 000011 11233333 33443322 34566777788888888875 454 54
Q ss_pred c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHH
Q 048643 414 P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMV 491 (506)
Q Consensus 414 p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l 491 (506)
+ .++.|.+... ....++.+.|.++|++ +.+. +..++|+++ +..+++++|+++++.|
T Consensus 384 ~~g~~~~~~~~~~-----------------~~~~~~~~~l~~~Gv~-v~~~---g~~~iRi~~-~~~~t~e~i~~~l~~l 441 (449)
T 2cjg_A 384 GRGLMCAFSLPTT-----------------ADRDELIRQLWQRAVI-VLPA---GADTVRFRP-PLTVSTAEIDAAIAAV 441 (449)
T ss_dssp EETTEEEEECSSH-----------------HHHHHHHHHHHHTTEE-CEEE---TTTEEEECC-CTTCCHHHHHHHHHHH
T ss_pred eccEEEEEEECCh-----------------HHHHHHHHHHHHCCeE-EecC---CCCEEEEEC-CCCCCHHHHHHHHHHH
Confidence 3 6666665321 1235677777777864 4332 346899987 5677899999999999
Q ss_pred HHHHHHH
Q 048643 492 QEQLEAF 498 (506)
Q Consensus 492 ~~~~~~l 498 (506)
+++.+++
T Consensus 442 ~~~l~~~ 448 (449)
T 2cjg_A 442 RSALPVV 448 (449)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987764
No 219
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.66 E-value=1.9e-14 Score=148.83 Aligned_cols=304 Identities=11% Similarity=0.012 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCC-eEEEeCCCCchHHHHHHHHh
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~-~~v~~s~~~H~s~~ka~~~~ 211 (506)
...++.+++++.++ ..+ ..++++|||+|+..|+.+++... ++ .+|......|.+...+....
T Consensus 96 ~~~~l~~~la~~~~-~~~-------~v~~~~sGsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~~ 158 (434)
T 3l44_A 96 LEVKFAKMLKEAMP-ALD-------KVRFVNSGTEAVMTTIRVARAYT---------GRTKIMKFAGCYHGHSDLVLVAA 158 (434)
T ss_dssp HHHHHHHHHHHHCT-TCS-------EEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSGGGGBC-
T ss_pred HHHHHHHHHHHhCC-CCC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCcHHHHhhc
Confidence 44455677888876 222 68999999999999999887641 33 34444444454333222222
Q ss_pred CCCC----------------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHH
Q 048643 212 GIDL----------------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPL 271 (506)
Q Consensus 212 G~g~----------------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I 271 (506)
|.+. ..++.+|. -|+++|++++++... .+.+|+++...+++|.+.| +++|
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l 228 (434)
T 3l44_A 159 GSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKPGFLEKV 228 (434)
T ss_dssp ------CCCBSSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred CCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCHHHHHHH
Confidence 2210 02333332 189999999986421 2446677666677888887 9999
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCcc
Q 048643 272 CDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKA 351 (506)
Q Consensus 272 ~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 351 (506)
+++|++||+++|+|++|.++ ...........++ ..|.+++ .|.++.++..|+++.++ +. .+.+........
T Consensus 229 ~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~-~i-~~~~~~~~~~~~--- 299 (434)
T 3l44_A 229 NELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTAL--GKVIGGGLPIGAYGGKK-EI-MEQVAPLGPAYQ--- 299 (434)
T ss_dssp HHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECH-HH-HTTBTTTSSBCC---
T ss_pred HHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeeh--hhhhcCCcCeeeEEEcH-HH-HHhhccCCCccc---
Confidence 99999999999999999876 3221111111223 3566655 49988888899986643 32 222221100000
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHH---HHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc--c---ceEEE
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWL---VIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS--P---SAVMD 419 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--p---~~v~f 419 (506)
..+.....+...+ +++.+.. ++++++..++.+++++.|++ .+.+. + .++.+
T Consensus 300 --------------~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~ 362 (434)
T 3l44_A 300 --------------AGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTV 362 (434)
T ss_dssp --------------CCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEE
T ss_pred --------------CCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEE
Confidence 0111123333333 3443322 34555666666777766655 33222 2 66667
Q ss_pred eecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 420 KLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
.+........ ......-.....++.+.+.++|+. +.+. +...+|++ ...++++|++++++|+++.+++.
T Consensus 363 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~~~~~rl~---~~~t~e~i~~~l~~l~~~l~~~~ 431 (434)
T 3l44_A 363 YFTTNTIEDY----DAAQDTDGEMFGKFFKLMLQEGVN-LAPS---KYEAWFLT---TEHTKEDIEYTIEAVGRAFAALA 431 (434)
T ss_dssp EESSSCCCSH----HHHHHSCHHHHHHHHHHHHHTTEE-CCSS---TTCCEECC---TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCcccch----hhccccCHHHHHHHHHHHHHCCeE-Eeec---CCCcEEEe---cccCHHHHHHHHHHHHHHHHHHH
Confidence 6643210000 000000012345677788888864 4432 22457774 45688999999999999988775
Q ss_pred c
Q 048643 500 T 500 (506)
Q Consensus 500 ~ 500 (506)
+
T Consensus 432 ~ 432 (434)
T 3l44_A 432 D 432 (434)
T ss_dssp H
T ss_pred h
Confidence 4
No 220
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.66 E-value=2e-14 Score=150.55 Aligned_cols=310 Identities=11% Similarity=0.026 Sum_probs=177.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh-hc----------------ccCC-CC
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK-IG----------------RENI-SK 191 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~-~~----------------~~~~-~~ 191 (506)
..++++++.+.++++++...+ ..+|++|||+||..|+.++|.....+ .+ ..|. ++
T Consensus 108 ~~~l~~~la~~l~~~~~~~~~-------~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~ 180 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGMS-------QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDY 180 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcC-------EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCC
Confidence 456777777777777643322 68999999999999999998543210 01 0111 13
Q ss_pred eEEEeCCCCchHHHHHHHHhCC--------CCCCeEEEecCCC-----CC-------cccCHHHHHHHHHHHHhcCCccE
Q 048643 192 LVVYGSDQTHCALQKAAQIVGI--------DLKNFRAIKTTKS-----SS-------YGLSPDSLLTQINLDVEAGLVPL 251 (506)
Q Consensus 192 ~~v~~s~~~H~s~~ka~~~~G~--------g~~~v~~v~~~~~-----~~-------~~~d~~~L~~~i~~~~~~g~~p~ 251 (506)
.+|......|-+..-+..+.|. ....+..+++... .. ...|+++|+++|++....+..+.
T Consensus 181 ~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 260 (472)
T 1ohv_A 181 SILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVA 260 (472)
T ss_dssp EEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred eEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 4555555667655555544442 1111122333110 00 02378999999976432222355
Q ss_pred EEEEeccCCCCCcccC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEcCcccc-CCCCcc
Q 048643 252 FLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVE-GADSFSLNAHKWF-FTTLDC 325 (506)
Q Consensus 252 ~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~-~aDsi~~~~hK~l-~~p~~~ 325 (506)
+|++....+++|.+-| +++|+++|++||++||+|++|.|+......+.....++. ..|.++++ |++ + .
T Consensus 261 ~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~----G 334 (472)
T 1ohv_A 261 GIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT----G 334 (472)
T ss_dssp EEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS----E
T ss_pred EEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc----C
Confidence 7777766777998877 999999999999999999999763221110111111332 37887765 984 3 2
Q ss_pred eEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHH
Q 048643 326 CCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERL 405 (506)
Q Consensus 326 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 405 (506)
|+++ + + .+. ...+.+.. . + .++-......+..+|+.+-.+ ++.++..++.++|.+.
T Consensus 335 G~~~-~-~-~~~---~~~~~~~~------------~--T-~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~ 390 (472)
T 1ohv_A 335 GFFH-K-E-EFR---PNAPYRIF------------N--T-WLGDPSKNLLLAEVINIIKRE---DLLSNAAHAGKVLLTG 390 (472)
T ss_dssp EEEE-C-G-GGS---CSSSSSSC------------C--S-SSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHH
T ss_pred CccC-c-h-hhc---cccccccc------------C--c-cCccHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 5443 2 2 111 00000000 0 1 011111112333444444332 3566777788888888
Q ss_pred HHcC----CC-Cc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEec
Q 048643 406 VASD----KR-VS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVG 475 (506)
Q Consensus 406 l~~~----~~-~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 475 (506)
|+++ |. +. + .++.|.+.. ......+.++|.++|+. +.+. +..++|+++
T Consensus 391 L~~l~~~~~~~v~~~~~~g~~~~~~~~~-----------------~~~~~~~~~~l~~~Gv~-~~~~---g~~~iRi~~- 448 (472)
T 1ohv_A 391 LLDLQARYPQFISRVRGRGTFCSFDTPD-----------------ESIRNKLISIARNKGVM-LGGC---GDKSIRFRP- 448 (472)
T ss_dssp HHHHHHHCTTTCEEEEEETTEEEEECSS-----------------HHHHHHHHHHHHHTTEE-CEEE---TTTEEEECC-
T ss_pred HHHHHhhCCCcEEeecCCceEEEEEeCC-----------------hhHHHHHHHHHHHCCeE-EecC---CCCEEEEEC-
Confidence 7653 43 43 3 566665422 12245677778788864 3332 346899988
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 048643 476 ATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 476 ~~~tt~edi~~li~~l~~~~~~l 498 (506)
+..++++||+++++.|+++.+++
T Consensus 449 ~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 449 TLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHhc
Confidence 56788999999999999887653
No 221
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.65 E-value=6.7e-14 Score=144.79 Aligned_cols=306 Identities=12% Similarity=0.039 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
.....++.++++++++ ..+ ..++++|||+|+..++.+||... + ++.+|.+....|....-+...
T Consensus 95 ~~~~~~l~~~la~~~~-~~~-------~v~~~~sgseA~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~ 158 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RGG-------MIRFVNSGTEATMTAIRLARGYT-G-------RDLILKFDGCYHGSHDAVLVA 158 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TTC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEEETCCCCSSGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCeEEEEcCCcCCCCHHHHHh
Confidence 4455667788888874 222 68999999999999999887431 1 334454444445322211101
Q ss_pred -------------hCCC---CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhH
Q 048643 211 -------------VGID---LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKP 270 (506)
Q Consensus 211 -------------~G~g---~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~ 270 (506)
.|+. ...++.+|. .|+++|+++|++.. ..+.+|+++...+++|.+-| +++
T Consensus 159 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 228 (434)
T 2epj_A 159 AGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAA 228 (434)
T ss_dssp CC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHH
T ss_pred cCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHH
Confidence 1220 013556653 38999999997631 12456666666667898887 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCc
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNK 350 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 350 (506)
|.++|++||+++++|++|+++ ...+.......++ ..|.+++ +|+++..+..|++++++ + +.+.+........
T Consensus 229 l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~~~~-~-~~~~l~~~~~~~~-- 300 (434)
T 2epj_A 229 LQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAVAGSR-E-VMSLLTPQGKVFN-- 300 (434)
T ss_dssp HHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECH-H-HHTTBTTTSSBCC--
T ss_pred HHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeeeeecH-H-HHHhhccCCCccc--
Confidence 999999999999999999865 3222111111133 4676544 69998767789888864 2 2223321000000
Q ss_pred cccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---CCc----c--ceEE
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---RVS----P--SAVM 418 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~----p--~~v~ 418 (506)
..+-....+.. ..+|+.+.. +++.++..++.+++.+.|++.. ++. + .++.
T Consensus 301 ---------------~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~ 362 (434)
T 2epj_A 301 ---------------AGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQ 362 (434)
T ss_dssp ---------------CCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEE
T ss_pred ---------------CCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEE
Confidence 00111122333 333443322 3456677778888888886641 232 2 6677
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+.+.........+....+ .....++.+.|.++|+ ++.+.. ...+|++ ...++++|+++++.|+++.+++
T Consensus 363 i~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Gv-~v~~~~---~~~~~~~---~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 363 LFIGVEEVSNAAQARKAD----KKFYVKLHEEMLRRGV-FIAPSN---LEAVFTG---LPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp EEETCSCCSSHHHHTTSC----HHHHHHHHHHHHHTTE-ECCSST---TSCEECC---TTCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCcccchhccccC----HHHHHHHHHHHHHCCe-EEeccC---CCcEEEe---ccCCHHHHHHHHHHHHHHHHHH
Confidence 766431000000000000 1224567777877886 444432 1234443 4568899999999999988776
Q ss_pred H
Q 048643 499 L 499 (506)
Q Consensus 499 ~ 499 (506)
.
T Consensus 432 ~ 432 (434)
T 2epj_A 432 L 432 (434)
T ss_dssp H
T ss_pred h
Confidence 4
No 222
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.64 E-value=1.3e-13 Score=142.38 Aligned_cols=305 Identities=10% Similarity=-0.045 Sum_probs=173.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
......++.+++++.++ +.+ ..++++||++|+..|+..++... + ++.+|......|.+...+..
T Consensus 90 ~~~~~~~la~~l~~~~~-~~~-------~v~~~~ggsea~~~al~~a~~~~-------~-~~~vi~~~~~yhg~~~~~~~ 153 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVP-SIE-------MVRFVNSGTEACMAVLRIMRAYT-------G-RDKIIKFEGCYHGHADMFLV 153 (427)
T ss_dssp CCHHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEEETCCCCSCGGGCS
T ss_pred CCHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCCHHHHH
Confidence 34566777889999987 332 78999999999999998887531 0 23444444445533222111
Q ss_pred HhCC-------CC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hh
Q 048643 210 IVGI-------DL---------KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LK 269 (506)
Q Consensus 210 ~~G~-------g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~ 269 (506)
..|. .. ..++.+|.+ |+++|++++++. +..+.+|+++...+++|.+.| ++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~ 223 (427)
T 3fq8_A 154 KAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLE 223 (427)
T ss_dssp SCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHH
T ss_pred hcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHH
Confidence 1111 00 024444421 899999999763 123567777777788899988 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 048643 270 PLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKN 349 (506)
Q Consensus 270 ~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 349 (506)
+|+++|++||+++++|++|+++ ...........++ ..|.++++ |.++..+..|+++.+ ++. .+.+.....+..
T Consensus 224 ~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~-~~~-~~~~~~~~~~~~- 296 (427)
T 3fq8_A 224 GLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGK-REI-MQLVAPAGPMYQ- 296 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEEC-HHH-HTTBTTTSSBCC-
T ss_pred HHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEEEEc-HHH-HHhhccCCCccc-
Confidence 9999999999999999999865 3221111112222 35766665 999876778888764 332 223321111110
Q ss_pred ccccCCCccCCCCccccCCCCCCchHHHHHH---HHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc--c---ceE
Q 048643 350 KATESKQVVDYKDWQITLSRRFRSLKLWLVI---RNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS--P---SAV 417 (506)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l---~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--p---~~v 417 (506)
..+-....+...+++ +.+..+ ++.++..++.+++++.|++ .+... + .++
T Consensus 297 ----------------~~t~~~~~~~~aa~~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 357 (427)
T 3fq8_A 297 ----------------AGTLSGNPLAMTAGIKTLELLRQP---GTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 357 (427)
T ss_dssp ----------------CCTTTTCHHHHHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEE
T ss_pred ----------------cCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEE
Confidence 011112334334443 333333 3455666666666666654 32211 1 566
Q ss_pred EEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 418 MDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 418 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
.|.+..............+ .....++.+.+.++|++ +.+.. .. |+++ +...++++|++++++|+++.++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~Gi~-v~~~~---~~--r~~~-~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 358 GFFFTEGPVHNYEDAKKSD----LQKFSRFHRGMLEQGIY-LAPSQ---FE--AGFT-SLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp EEESSSCCCCSHHHHTTSC----HHHHHHHHHHHHHTTEE-CCSST---TS--CEEC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcccccccccccc----HHHHHHHHHHHHHCCcE-EecCC---CC--CEEe-eCcCCHHHHHHHHHHHHHHHHh
Confidence 6665432100000000000 12345677788888874 33321 11 4444 4567889999999999988764
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.64 E-value=6.8e-14 Score=145.65 Aligned_cols=308 Identities=12% Similarity=0.007 Sum_probs=172.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..+++.++.+|++++++ ..+ ..++++||++|+..++.+||... + ++.+|++....|....-+..
T Consensus 95 ~~~~~~~la~~l~~~~~-~~~-------~v~~~~gg~eA~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~ 158 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SIR-------KLRFTGSGTETTLLALRVARAFT-G-------RRMILRFEGHYHGWHDFSAS 158 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TCS-------EEEEESCHHHHHHHHHHHHHHHH-C-------CCEEEEECC-----------
T ss_pred CCHHHHHHHHHHHhhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCEEEEEcCCcCCCchhhHh
Confidence 46788999999999986 322 68999999999999999887431 1 33455555444432222211
Q ss_pred H----------hCCCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHH
Q 048643 210 I----------VGIDL---KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLC 272 (506)
Q Consensus 210 ~----------~G~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~ 272 (506)
. .|+.. ..++.+|. .|+++|+++|++.. ..+.+|+++...+++|.+-| +++|+
T Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~tG~~~~~~~~l~~l~ 228 (453)
T 2cy8_A 159 GYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG---SDIAAFIAEPVGSHFGVTPVSDSFLREGA 228 (453)
T ss_dssp -----------------CGGGEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSEHHHHTEECCHHHHHHHH
T ss_pred hcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC---CCEEEEEECCCCCCCCCcCCCHHHHHHHH
Confidence 1 13210 12334432 38999999997531 12446666555566898877 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++|++||+++++|++|+++ ...+.......++ ..|.++ +.|+++.++..|++++++ + +.+.+.... ...
T Consensus 229 ~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~v~~~~-~-~~~~l~~~~----~~~- 297 (453)
T 2cy8_A 229 ELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTC--LAKASAGGLPGGILGGRE-D-VMGVLSRGS----DRK- 297 (453)
T ss_dssp HHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEE--EEGGGGTTSSCEEEEECH-H-HHTTSSSCC--------
T ss_pred HHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEE--EChhhhCCcceEEEechH-H-HHHHhcccc----CCC-
Confidence 9999999999999999865 3221111111222 357654 559998777899988864 2 223332100 000
Q ss_pred cCCCccCCCCccccCCCCCCchHHH---HHHHH-hchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEEE
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLW---LVIRN-YGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVMD 419 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~-~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~f 419 (506)
. ....+-....+... .+++. + . +++.++..++.+++.+.|++. +... + .++.+
T Consensus 298 -------~---~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i 363 (453)
T 2cy8_A 298 -------V---LHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHL 363 (453)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEE
T ss_pred -------c---eeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEE
Confidence 0 00001111233333 34443 3 2 345566777788888887653 3222 2 66667
Q ss_pred eecC-----CC-cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 420 KLKP-----KY-ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 420 ~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+.+ .. .....+....+ .....++.+.+.++|+. +.+. + .+|+ +...++++|+++++.|++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~Gv~-v~~~---~--~~~l---~~~~t~~~i~~~l~~l~~ 430 (453)
T 2cy8_A 364 MPGLPPNTTDTGSITRAEVARPD----VKMIAAMRMALILEGVD-IGGR---G--SVFL---SAQHEREHVEHLVTTFDR 430 (453)
T ss_dssp EETSCTTCCCCHHHHTTCSCCCC----HHHHHHHHHHHHHTTEE-CBTT---T--EEEC---CTTCCHHHHHHHHHHHHH
T ss_pred EEecccccccccccccccccccc----HHHHHHHHHHHHHCCeE-EeCC---C--CEEe---eccCCHHHHHHHHHHHHH
Confidence 6643 10 00000000000 12245677777777864 4321 2 2454 356788999999999999
Q ss_pred HHHHHHcc
Q 048643 494 QLEAFLTT 501 (506)
Q Consensus 494 ~~~~l~~~ 501 (506)
+.+++.+.
T Consensus 431 ~l~~~~~~ 438 (453)
T 2cy8_A 431 VLDRLADE 438 (453)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 98887553
No 224
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.61 E-value=3.8e-13 Score=138.89 Aligned_cols=302 Identities=8% Similarity=0.005 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
....++.++++++++ ..+ ..++++|||+|+..|+.++|... . ++.+|......|.....++...
T Consensus 93 ~~~~~la~~l~~~~~-~~~-------~v~~~~sGsea~~~al~~a~~~~--~------~~~ii~~~~~yhg~~~~~~~~~ 156 (429)
T 4e77_A 93 EMEVKMAQLVTDLVP-TMD-------MVRMVNSGTEATMSAIRLARGYT--G------RDKIIKFEGCYHGHADCLLVKA 156 (429)
T ss_dssp HHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH--C------CCEEEEETTCCCC---------
T ss_pred HHHHHHHHHHHhhCC-CCC-------EEEEeCcHHHHHHHHHHHHHHhh--C------CCEEEEEcCccCCCChhhhhhc
Confidence 455566688888886 222 68999999999999999887531 0 3345555555665544333222
Q ss_pred CCCCC----------------CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHH
Q 048643 212 GIDLK----------------NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPL 271 (506)
Q Consensus 212 G~g~~----------------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I 271 (506)
|.+.. .+..+|. .|+++|++++++. +..+.+|+++...+..|.+.| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~~~~~l~~l 226 (429)
T 4e77_A 157 GSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAFEQY---PQEVACIIVEPVAGNMNCIPPLPEFLPGL 226 (429)
T ss_dssp ---------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred CCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHHHhc---CCCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 22110 1222221 2899999999752 123445666655566788877 9999
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCcc
Q 048643 272 CDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKA 351 (506)
Q Consensus 272 ~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 351 (506)
+++|++||+++++|++|+++ ...........++ ..|.+++ .|.++..+..|+++.+. +. .+.+........
T Consensus 227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~--sK~~~~G~~~G~~~~~~-~~-~~~l~~~~~~~~--- 297 (429)
T 4e77_A 227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCL--GKIIGGGMPVGAFGGRR-EV-MNALAPTGPVYQ--- 297 (429)
T ss_dssp HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEE--EGGGGTTSCCEEEEECH-HH-HTTBTTTSSBCC---
T ss_pred HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeee--cccccCCCCeEEEEECH-HH-HHHhccCCCccc---
Confidence 99999999999999999865 3221111111222 3566655 49998777888877643 22 222221100000
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHH---HHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCCCc--c---ceEEE
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWL---VIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKRVS--P---SAVMD 419 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--p---~~v~f 419 (506)
..+-....+...+ +|+.+.. ++++++..++.+++++.|++ .+... + .++.+
T Consensus 298 --------------~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~ 360 (429)
T 4e77_A 298 --------------AGTLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGL 360 (429)
T ss_dssp ----------------CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEE
T ss_pred --------------cCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEE
Confidence 0011123333333 3443322 34455566666666666654 33222 2 66666
Q ss_pred eecCCC-cccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 048643 420 KLKPKY-ENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLE 496 (506)
Q Consensus 420 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~ 496 (506)
.+.... ...+..-...+ .....++.+.|.++|++ +.+.. ...+|+ +...++++|+++++.|+++.+
T Consensus 361 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Gi~-v~~~~---~~~~~~---~~~~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 361 FFTNADTVTCYQDVMNCD----VERFKRFFHLMLEEGVY-LAPSA---FEAGFM---SLAHSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp ECCSSSCCCSHHHHHTSC----HHHHHHHHHHHHHTTEE-CCSST---TSCEEC---CTTCCHHHHHHHHHHHHHHHT
T ss_pred EEccCccccccccccccc----HHHHHHHHHHHHHCCeE-EeecC---CCCEEE---eccCCHHHHHHHHHHHHHHHH
Confidence 664320 00000000000 12345677888888864 43321 123444 356789999999999998764
No 225
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.58 E-value=5.5e-14 Score=144.08 Aligned_cols=321 Identities=10% Similarity=-0.010 Sum_probs=195.4
Q ss_pred HHHHHHHHHhhc-C-CCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHh
Q 048643 106 AGFLGEMLSSGF-N-VVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 183 (506)
Q Consensus 106 ~~~~~~~l~~~~-n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~ 183 (506)
+..+.+... .+ + .....|....+..++.+.+.+|+.+..+.+... +.-..++|.||++|+..++.+..+.
T Consensus 49 ~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~i~i~~t~G~~~al~~~~~~l~~~---- 120 (405)
T 3k7y_A 49 FDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIED---KKICTIQCIGGTGAIFVLLEFLKML---- 120 (405)
T ss_dssp CHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTT---TCEEEEEEEHHHHHHHHHHHHHHTT----
T ss_pred cHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccc---cceEEEEcCchHHHHHHHHHHHHhc----
Confidence 344555544 32 2 234467777788999999999996655443110 0003588999998887766554431
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecc-CCCC
Q 048643 184 IGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIG-TTAI 262 (506)
Q Consensus 184 ~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~t 262 (506)
.+ ..|+++..++.....+++..|. +++.+|+..++++.+|+++|++++++.. ...+|+++.+ +|+|
T Consensus 121 -----~~-d~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~i~l~~~~~NPT 187 (405)
T 3k7y_A 121 -----NV-ETLYVTNPPYINHVNMIESRGF---NLKYINFFDYNLIDINYDLFLNDLRNIP----NGSSVILQISCYNPC 187 (405)
T ss_dssp -----TC-CEEEEESSCCHHHHHHHHTTTC---EEEEECCEETTTTEECHHHHHHHHHHSC----SSCEEEECCSSCTTT
T ss_pred -----CC-CEEEEeCCCCHhHHHHHHHcCC---eEEEEeccccccCCcCHHHHHHHHHhCC----CCeEEEEeCCCCCCC
Confidence 15 7888999999999999999999 9999998323358999999999997631 1235666654 7999
Q ss_pred Cccc---ChhHHHHHHHHhCCEEEeecccccccccC-c----cchhhhcCCCCCC-eeEEcCccccC-CCCcceEEEE--
Q 048643 263 TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIC-P----EFQHFIDGVEGAD-SFSLNAHKWFF-TTLDCCCLWV-- 330 (506)
Q Consensus 263 G~id---pl~~I~~ia~~~g~~lhVDaA~gg~~~~~-~----~~~~~~~gi~~aD-si~~~~hK~l~-~p~~~g~~~~-- 330 (506)
|.+- .+++|+++|++|++|+++|.+|.....-. + ..+.... . .-. .+..++.|.++ ....+|++++
T Consensus 188 G~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~-~-~~~~i~~~S~SK~~~l~GlRiG~~~~~~ 265 (405)
T 3k7y_A 188 SVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE-K-NIAFSVCQSFSKNMSLYGERAGALHIVC 265 (405)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHT-T-TCCEEEEEECTTTSCCTTTTEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHh-c-CCcEEEEeeCCccCCCccccceEEEEEe
Confidence 9994 47788999999999999999997654211 0 0111111 1 112 33567899998 4578898754
Q ss_pred eCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHHHHHHHHHH
Q 048643 331 KDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRSHVNMAKLF 402 (506)
Q Consensus 331 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~~~~~a~~l 402 (506)
.+++... .+......+... ...+ ...+...++...+. .+.++++.++..+.++++
T Consensus 266 ~~~~~~~-~~~~~l~~~~~~-------------~~~~---~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l 328 (405)
T 3k7y_A 266 KNQEEKK-IVFNNLCFIVRK-------------FYSS---PVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILF 328 (405)
T ss_dssp SSHHHHH-HHHHHHHHHHHT-------------TTSS---CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHH-HHHHHHHHHHhc-------------ccCC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443321 111000000000 0000 01122222222221 123455666788889999
Q ss_pred HHHHH----cCC---CCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEE
Q 048643 403 ERLVA----SDK---RVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAM 470 (506)
Q Consensus 403 ~~~l~----~~~---~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l 470 (506)
.+.|+ +.+ +|+ | +++.|--.+. ++.++|.+.|+ ++.+. +
T Consensus 329 ~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~---------------------~~~~~L~~~gV-~v~p~---~---- 379 (405)
T 3k7y_A 329 FNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA---------------------KIAEHLKTHHI-YIINN---G---- 379 (405)
T ss_dssp HHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG---------------------GGTTTTTTTTE-ECCTT---S----
T ss_pred HHHHHhhhhhcCCCCCCccccCCceEEEecCCCH---------------------HHHHHHHHCCE-eecCC---C----
Confidence 99998 763 255 4 5555421111 22344544454 55542 2
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 471 RFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 471 R~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
|++++. .++++|+.++++|.++.+.
T Consensus 380 Ris~a~--~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 RINVSG--ITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp EEEGGG--CCTTHHHHHHHHHHHHHHC
T ss_pred eEEEec--cCHHHHHHHHHHHHHHHhh
Confidence 999854 4566899999999988753
No 226
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.56 E-value=2.6e-13 Score=138.54 Aligned_cols=288 Identities=11% Similarity=-0.019 Sum_probs=179.8
Q ss_pred cccccChhh-----HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCe----
Q 048643 122 FNWISSPAA-----TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL---- 192 (506)
Q Consensus 122 ~~~~~~p~~-----~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~---- 192 (506)
..|....+. .++++.+.+|+. ..|.+... ....++|+|+++++..++.+..+ ++.
T Consensus 57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~-----------~Gd~~~~ 120 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE----DRYIVVGTGSTQLCQAAVHALSS-----------LARSQPV 120 (391)
T ss_dssp SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS----SSEEEEEEHHHHHHHHHHHHHHH-----------TSSSSSE
T ss_pred hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----------CCCCCcc
Confidence 345555555 889999999887 45654321 12689999999998877766543 444
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHH
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLC 272 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~ 272 (506)
.|+++..+|.++..+++..|. +++.+++|.+ .++ . ..+.+|+++.++|+||.+-+ +|+
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~---~l~--------~------~~~k~v~l~~p~NPtG~~~~--~l~ 178 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRS---GMYKWEGDAW---GFD--------K------KGPYIELVTSPNNPDGTIRE--TVV 178 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCB---TTEEEEEEST---TCC--------C------CSCEEEEEESSCTTTCCCCC--CCC
T ss_pred eEEEcCCCchhHHHHHHHcCC---eEEEecCCHH---HcC--------C------CCCEEEEECCCCCCCchhHH--HHH
Confidence 788999999999999999999 8999998753 232 0 12457778999999999975 554
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCcc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKA 351 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 351 (506)
+.++.+++|+++|.+|+.. ... .+......+.+..+++|.++.| ..+|++++.++... +.+.....+...
T Consensus 179 ~~~~~~~~~ii~De~y~~~-----~~~-~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~-~~l~~~~~~~~~-- 249 (391)
T 3bwn_A 179 NRPDDDEAKVIHDFAYYWP-----HYT-PITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVA-KKMVEYIIVNSI-- 249 (391)
T ss_dssp -----CCCEEEEECTTCST-----TTS-CCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHH-HHHHHHHHHHHS--
T ss_pred HHhhcCCCEEEEeCCCCCC-----CCC-ccccCCCCeEEEEechhhcCCCccceEEEEecCHHHH-HHHHHHhccccc--
Confidence 4222233999999999731 110 1111224577888999998754 55788887554433 222211111000
Q ss_pred ccCCCccCCCCccccCCCCCCchHHHHHHHHh--c----------hhHHHHHHHHHHHHHHHHHHHHHcCCCCc---c--
Q 048643 352 TESKQVVDYKDWQITLSRRFRSLKLWLVIRNY--G----------VANLRHFLRSHVNMAKLFERLVASDKRVS---P-- 414 (506)
Q Consensus 352 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--G----------~~g~~~~i~~~~~~a~~l~~~l~~~~~~~---p-- 414 (506)
+ ...+..+++...+ + .+.++++.++..++.+++.+.|++.|+++ |
T Consensus 250 ---------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~ 311 (391)
T 3bwn_A 250 ---------------G---VSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPE 311 (391)
T ss_dssp ---------------S---CCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCC
T ss_pred ---------------C---CCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence 0 0112222222222 1 35678888889999999999999987665 3
Q ss_pred c--------------eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-CEEEEEEEecCCCC
Q 048643 415 S--------------AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-GIYAMRFAVGATLT 479 (506)
Q Consensus 415 ~--------------~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t 479 (506)
. .+.+++... +.+.+.+.+.|+....+..+. +..++|+++.+
T Consensus 312 ~~~~f~~~~~~~~g~~~~~~~~~~--------------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~--- 368 (391)
T 3bwn_A 312 AFCNYFGKSLESYPAFAWLGTKEE--------------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS--- 368 (391)
T ss_dssp EEETTTTEEECCCCSEEEEEESSS--------------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS---
T ss_pred cccccccccCCCcceEEEecCCcH--------------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC---
Confidence 1 233444211 233444556676544333332 25689999963
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 048643 480 EERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 480 t~edi~~li~~l~~~~~~ 497 (506)
++++|+++++.|+++.++
T Consensus 369 ~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 369 REDVFNVFLERLANMKLI 386 (391)
T ss_dssp CHHHHHHHHHHHHSCC--
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 788999999999876543
No 227
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.56 E-value=1.1e-13 Score=147.19 Aligned_cols=346 Identities=8% Similarity=-0.006 Sum_probs=189.8
Q ss_pred ccccChhhHHHHHH-HHHHHHHHcCCC--C-ccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC
Q 048643 123 NWISSPAATELENI-VMDWLGQMLKLP--K-SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD 198 (506)
Q Consensus 123 ~~~~~p~~~~lE~~-~~~~la~l~g~~--~-~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~ 198 (506)
.|...++...+.++ +..|+.+.++.. . +. ...++|+|+++++..++.+...+.+- .++..|+++.
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-----~~I~~t~G~~eal~~~~~~l~~~~l~------~~Gd~Vlv~~ 201 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSES-----VNLFAVEGGTAAMAYIFESLKLNGLL------KAGDKVAIGM 201 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGG-----EEEEEEEHHHHHHHHHHHHHHHTTSS------CTTCEEEEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCc-----ceEEEECCHHHHHHHHHHHhhhhhcC------CCCCEEEEeC
Confidence 44444344445544 556667765431 1 11 27889999998887766553211000 1556788888
Q ss_pred CCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC---hhHHHHHH
Q 048643 199 QTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---LKPLCDVA 275 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---l~~I~~ia 275 (506)
.+|..+..++.+.+.|. +++.+|+++++++.+|+++|++++.. .+.+|+++.++|+||.+-+ +++|+++|
T Consensus 202 P~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a 274 (546)
T 2zy4_A 202 PVFTPYIEIPELAQYAL-EEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274 (546)
T ss_dssp SCCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCHHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCc-EEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence 99999988877654321 78889987655678999999887632 2447777899999999965 67788888
Q ss_pred --HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCc--------
Q 048643 276 --KQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNP-------- 344 (506)
Q Consensus 276 --~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~-------- 344 (506)
+++|+++++|++|+.+..-....... ....+.+..+++|+++.| +.+|+++..+...........+
T Consensus 275 ~~~~~~~~ii~De~y~~~~~~~~s~~~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~ 351 (546)
T 2zy4_A 275 AEHRPDLMILTDDVYGTFADDFQSLFAI---CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALD 351 (546)
T ss_dssp HHTCTTCEEEEECTTGGGSTTCCCHHHH---CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHH
T ss_pred HhccCCcEEEEeCcchhhcccCcCHHHh---CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHH
Confidence 77899999999998654211111111 113456778899999754 5689988876522221111000
Q ss_pred -cccCCccccCCCccCC--------CCccccCCCCCCchHHH----HHH-HHh--chhHHHHHHHHHHHHHHHHHHHHHc
Q 048643 345 -EYLKNKATESKQVVDY--------KDWQITLSRRFRSLKLW----LVI-RNY--GVANLRHFLRSHVNMAKLFERLVAS 408 (506)
Q Consensus 345 -~yl~~~~~~~~~~~~~--------~~~~~~~sr~~~al~~~----~~l-~~~--G~~g~~~~i~~~~~~a~~l~~~l~~ 408 (506)
.|-.... ......+ .......+.......-. +++ ..+ +....+++.+...++.+++.+.|.
T Consensus 352 ~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~- 428 (546)
T 2zy4_A 352 HRYRSLLP--DVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG- 428 (546)
T ss_dssp HHHTTTCS--CGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-
T ss_pred HHhhhccc--cccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 0100000 0000000 00000000000111101 011 112 234456666666667777878775
Q ss_pred CCCCc---c--ce-EEEeecCCCcccccccccchH-HHH--H-HHHHHHHHHHHhcCcEEEeeeeEC-CEEEEEEEecCC
Q 048643 409 DKRVS---P--SA-VMDKLKPKYENCHSQQLVTEE-EAI--N-EFNRELLESINASGKAYMTHAVCG-GIYAMRFAVGAT 477 (506)
Q Consensus 409 ~~~~~---p--~~-v~f~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~ 477 (506)
. ++. | +. +.+++.... .... .... ..+ . .....+.+.+.+.|+....+..+. +..++|+++.+
T Consensus 429 ~-~~~~~~~~~~~~l~~~l~~~~--~~~~--~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~- 502 (546)
T 2zy4_A 429 M-PPLRDENAVDYYTLIDLQDVT--AKLY--GEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLAN- 502 (546)
T ss_dssp S-SCCCCTTBCCSEEEEEHHHHH--HHHH--CHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESSS-
T ss_pred C-CcccCCCCeeEEEEEEHHHhh--cccc--cHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEecc-
Confidence 3 343 3 33 344432100 0000 0000 000 0 012345566667787554443332 35689999953
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 048643 478 LTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 478 ~tt~edi~~li~~l~~~~~~l~ 499 (506)
.++++++++++.|+++.++..
T Consensus 503 -~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 503 -LNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHH
Confidence 467899999999998877654
No 228
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.54 E-value=1.8e-12 Score=133.67 Aligned_cols=301 Identities=12% Similarity=0.030 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
..++.++.++++++++ ..+ ..++++||++|+..++.+||... + ++.+|+.....|.....+...
T Consensus 91 ~~~~~~l~~~l~~~~~-~~~-------~v~~~~~g~ea~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~ 154 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FVD-------LVRFVNSGTEATMSALRLARGYT-G-------RPYIVKFRGNYHGHADGLLVE 154 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TCC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEETTCCCCCCGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCEEEEECCCcCCCcHHHHHh
Confidence 4556667788888875 222 68999999999999999877532 1 344555554455422222111
Q ss_pred h-------------CCC---CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhH
Q 048643 211 V-------------GID---LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKP 270 (506)
Q Consensus 211 ~-------------G~g---~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~ 270 (506)
. |+. ..+++.+|. .|+++|++++++.. ..+.+|+++...+++|.+-| +++
T Consensus 155 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 224 (424)
T 2e7u_A 155 AGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKA 224 (424)
T ss_dssp CCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHH
T ss_pred cCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 1 210 013555542 38999999997531 12445666554455898877 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCc
Q 048643 271 LCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNK 350 (506)
Q Consensus 271 I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 350 (506)
|.++ ++||+++++|++|+++ ...........++ ..|.+ +++|+++..+.+|+++.++ + +.+.+........
T Consensus 225 l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~~~~~~-~-~~~~~~~~~~~~~-- 295 (424)
T 2e7u_A 225 LHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLV--TLGKILGGGLPAAAYAGRR-E-IMEKVAPLGPVYQ-- 295 (424)
T ss_dssp HHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEE--EECGGGGTTSSCEEEEECH-H-HHTTBTTTSSBCC--
T ss_pred HHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchh--hhhhhhhCCcceEEEEEcH-H-HHhhhcccCCccc--
Confidence 9999 9999999999999865 3221111111233 35755 4579999777889888764 2 2233321000000
Q ss_pred cccCCCccCCCCccccCCCCCCchHHH---HHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc---c--ceEE
Q 048643 351 ATESKQVVDYKDWQITLSRRFRSLKLW---LVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS---P--SAVM 418 (506)
Q Consensus 351 ~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~---p--~~v~ 418 (506)
..+-....+... .+++.+.. .+++.++..++.+++.+.|++. +... + .++.
T Consensus 296 ---------------~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~ 358 (424)
T 2e7u_A 296 ---------------AGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMIT 358 (424)
T ss_dssp ---------------CCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEE
T ss_pred ---------------CCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEE
Confidence 001111233333 33333322 1456777778888888888764 3221 2 6666
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQ 494 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~ 494 (506)
+.+.+.......+....+ .....++.+.|.++|+ ++.+... ..+|++ ...++++|+++++.|+++
T Consensus 359 i~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Gv-~v~~~~~---~~~~~~---~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 359 VFFTEGPVVTFQDARRTD----TELFKRFFHGLLDRGI-YWPPSNF---EAAFLS---VAHREEDVEKTLEALRKA 423 (424)
T ss_dssp EESSSSCCCSHHHHTTSC----HHHHHHHHHHHHTTTE-ECCSSSS---SCEECC---TTCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcchhhhcccC----HHHHHHHHHHHHHCCe-EEeccCC---CceEee---ccCCHHHHHHHHHHHHHh
Confidence 665431000000000000 1234567778888776 4443321 234443 456888999999999865
No 229
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.54 E-value=5.6e-13 Score=134.26 Aligned_cols=308 Identities=12% Similarity=0.058 Sum_probs=185.6
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcE--EEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCC--
Q 048643 124 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG--VIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQ-- 199 (506)
Q Consensus 124 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g--~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~-- 199 (506)
|...-...++|..+++..+++||++... ++ +=.-+|+.||+.+..+..+ |++.|+.-+.
T Consensus 92 YgGce~vD~iE~la~~rak~lF~a~~A~------w~VNVQP~SGs~AN~avy~All~-----------PGD~ilg~~l~~ 154 (490)
T 3ou5_A 92 YGGAEVVDEIELLCQRRALEAFDLDPAQ------WGVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPD 154 (490)
T ss_dssp ----CHHHHHHHHHHHHHHHHTTCCTTT------EEEECCCSSHHHHHHHHHHHHCC------------CCCEECBC---
T ss_pred cCCChHHHHHHHHHHHHHHHHhCCCccc------cCCCCCcCCHHHHHHHHHHHHcC-----------CCCEEEecccCC
Confidence 3444567899999999999999998652 33 3344889999988877655 5555654433
Q ss_pred -CchHHHH-----HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHH
Q 048643 200 -THCALQK-----AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCD 273 (506)
Q Consensus 200 -~H~s~~k-----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ 273 (506)
.|.+.-. .....|.- -+++..++|++ ++.+|.+.+++..++.+ |-+|++- .+..-..-|++++.+
T Consensus 155 GGHltHg~~~~~~~v~~sg~~-~~~~~Y~vd~~-t~~IDyd~~~~~A~~~k-----PklIi~G--~SaY~r~id~~~~re 225 (490)
T 3ou5_A 155 GGHLTHGYMSDVKRISATSIF-FESMPYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAG--TSAYARLIDYARMRE 225 (490)
T ss_dssp --------------------------CBCEETT-TTEECHHHHHHHHHHHC-----CSEEEEC--CSSCCSCCCHHHHHH
T ss_pred CCcccccccCCCccccccccc-ccccccccCCC-CCcccHHHHHHHHhhcC-----CCeEEEC--CccCccccCHHHHHH
Confidence 4555442 22223331 14455566653 57999999999988763 6666553 345556789999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchh-------------HHhhh
Q 048643 274 VAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSA-------------LVSSL 340 (506)
Q Consensus 274 ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~-------------l~~~~ 340 (506)
||++.|++|++|.||-.+++....+..-+ +.||.+|.+.||+|..|. +|++++++... +.+.+
T Consensus 226 IAd~vGA~Lm~DmAHiaGLVA~g~~psP~---~~ADvVTtTTHKTLrGPr-GG~Il~~~~~~~~~~k~~~~~~~~~~kki 301 (490)
T 3ou5_A 226 VCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRI 301 (490)
T ss_dssp HHHHHTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSSTTCSCS-CEEEEEECSEEEECC--CCEEECCCHHHH
T ss_pred HHhhcccEEEechhhhhhhhcccccCCcc---ccceEEeccccccccCCC-ceEEEeccccccccccccchhHHHHHHHH
Confidence 99999999999999976665544443333 379999999999999997 57888876421 00111
Q ss_pred cCCccccCCccccCCCccCCCCccccCCCCCCc-hHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCCCCc-----c
Q 048643 341 STNPEYLKNKATESKQVVDYKDWQITLSRRFRS-LKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDKRVS-----P 414 (506)
Q Consensus 341 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-----p 414 (506)
.. -++ -+++++-.... .+.-.+++..-...+++..++..++|+.|++.|.+. ||. .
T Consensus 302 n~---aVF--------------Pg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgT 363 (490)
T 3ou5_A 302 NF---AVF--------------PSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGT 363 (490)
T ss_dssp HH---HHT--------------TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSC
T ss_pred Hh---hcC--------------ccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCC
Confidence 00 000 02233322222 222334444345567889999999999999999987 787 2
Q ss_pred --ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-----CEEEEEEEe---cCCCCCHHHH
Q 048643 415 --SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCG-----GIYAMRFAV---GATLTEERHV 484 (506)
Q Consensus 415 --~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lR~~~---~~~~tt~edi 484 (506)
..+.+.+.+.+. + .++..+.|.+.|+..-..+.+. -...||+.+ +..-..++|+
T Consensus 364 dnHlvLvDl~~~g~---------t-------G~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm 427 (490)
T 3ou5_A 364 DNHLVLVDLRPKGL---------D-------GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDF 427 (490)
T ss_dssp SSSEEEEECGGGTC---------C-------HHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHH
T ss_pred CceEEEEeccccCC---------C-------HHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHH
Confidence 666666554321 1 1233344444566432222111 134689987 2334566888
Q ss_pred HHHHHHHHHHH
Q 048643 485 MVAWTMVQEQL 495 (506)
Q Consensus 485 ~~li~~l~~~~ 495 (506)
+++.+.|.++.
T Consensus 428 ~~IA~~I~~~l 438 (490)
T 3ou5_A 428 RRVVDFIDEGV 438 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877654
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.49 E-value=6e-12 Score=129.98 Aligned_cols=303 Identities=11% Similarity=0.006 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh
Q 048643 132 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV 211 (506)
Q Consensus 132 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~ 211 (506)
.+|.++.+.+++++.--+ ...|+++||+||..|+.+||... + ++.+|......|-...-.....
T Consensus 127 ~~~~~lae~l~~~~p~~~--------~v~f~~SGsEA~e~AiklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~ 190 (454)
T 4ao9_A 127 LLEGRLARLICERFPQIE--------QLRFTNSGTEANLMALTAALHFT-------G-RRKIVVFSGGYHGGVLGFGARP 190 (454)
T ss_dssp SSHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-------T-CCEEEEETTCBCSTTCBBSSSB
T ss_pred HHHHHHHHHHHHhCCCCC--------EEEEeCchHHHHHHHHHHHHhcc-------c-CCeEEEEeCCcCCccccccccc
Confidence 345556677888774221 57899999999999999999763 0 2334445555554221110000
Q ss_pred CCC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEEEee
Q 048643 212 GID--LKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVD 285 (506)
Q Consensus 212 G~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lhVD 285 (506)
+-. ...+..+| .-|++++++.+++... ...+|++.-.....|.+-| |++|.++|++||++|++|
T Consensus 191 ~~~~~~~~~~~~p-------~nd~~~l~~~l~~~~~---~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~D 260 (454)
T 4ao9_A 191 SPTTVPFDFLVLP-------YNDAQTARAQIERHGP---EIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFD 260 (454)
T ss_dssp CTTSCCSEEEEEC-------TTCHHHHHHHHHHTGG---GEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCccCCCCcccCC-------CchHHHHHHHHhhcCC---ceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEE
Confidence 100 01223333 2388999999986432 2455666555556788877 999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccc
Q 048643 286 AAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQI 365 (506)
Q Consensus 286 aA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 365 (506)
+++.| .....+.....|+ ..|.+++. |.++..++.|.+..+..- .+.+......+.+
T Consensus 261 EV~tG--R~G~~~a~e~~gv-~PDi~t~g--K~lggG~Piga~~~~~ei--~~~~~~~~~~~~h---------------- 317 (454)
T 4ao9_A 261 EVMTS--RLAPHGLANKLGI-RSDLTTLG--KYIGGGMSFGAFGGRADV--MALFDPRTGPLAH---------------- 317 (454)
T ss_dssp CTTGG--GGSTTCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEECHHH--HGGGCTTTCSCCC----------------
T ss_pred CCCcC--CCccccchhccCC-CCcEEEec--cccCCCCcceeeeeHHHH--HHHHhhccCCccc----------------
Confidence 99875 2222222222345 57888764 888777778888877532 2333221111111
Q ss_pred cCCCCCCch---HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC----CCCc----c-ceEEEeecCCCcccccccc
Q 048643 366 TLSRRFRSL---KLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASD----KRVS----P-SAVMDKLKPKYENCHSQQL 433 (506)
Q Consensus 366 ~~sr~~~al---~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~----p-~~v~f~~~~~~~~~~~~~~ 433 (506)
..+-...++ ...++|+.+-.+ +..++..++.++|+++|+++ +-.. - .++.+.+.....+...+..
T Consensus 318 ~~T~~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~ 394 (454)
T 4ao9_A 318 SGTFNNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLA 394 (454)
T ss_dssp CCTTTTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGT
T ss_pred cCCCCCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHH
Confidence 011112233 334555555443 34556666777777777653 2111 1 4555544332211111110
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 434 VTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 434 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
..+ ..+...+...|.++|+ ++.+. + .+ .+ +.-.|++|||+++++|+++..+..
T Consensus 395 ~~d----~~~~~~~~~~ll~~Gv-~~~p~---~--~~--~~-s~~~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 395 AVD----GRLRQLLFFHLLNEDI-YSSPR---G--FV--VL-SLPLTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp TCC----HHHHHHHHHHHHHTTE-ECCTT---C--EE--EC-CTTCCHHHHHHHHHHHHHHHHHSG
T ss_pred hhh----HHHHHHHHHHHHHCCE-EEcCC---C--CE--EE-eCCCCHHHHHHHHHHHHHHHHhcc
Confidence 111 2345667778888886 45432 1 22 23 233578899999999999987754
No 231
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.45 E-value=3.3e-12 Score=131.14 Aligned_cols=325 Identities=10% Similarity=-0.028 Sum_probs=190.5
Q ss_pred HHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhccc
Q 048643 109 LGEMLSSGFNVVG-FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 187 (506)
Q Consensus 109 ~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~ 187 (506)
+.+......+.+. ..|....+..++.+.+.+++- |-.... +....+-|.|||.|...++......+.
T Consensus 67 Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~---g~~~~~---~~~~~~qt~ggtga~~~a~~~l~~~~~------ 134 (420)
T 4h51_A 67 VRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIY---GNTVEL---ENLVAVQTLSGTGAVSLGAKLLTRVFD------ 134 (420)
T ss_dssp HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHH---C---CG---GGEEEEEEEHHHHHHHHHHHHHTTTSC------
T ss_pred HHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhc---CCCccc---cccceeeecCchHHHHHHHHHHHHhcC------
Confidence 3344333343333 347777788899888877753 321110 011345678888888776655432211
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHhCCCCCC-eEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc-
Q 048643 188 NISKLVVYGSDQTHCALQKAAQIVGIDLKN-FRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV- 265 (506)
Q Consensus 188 ~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i- 265 (506)
.++..|++++.++.+....++..|. + |...+....+++.+|.+.+.+.+.... ....+++.+.++|+||.+
T Consensus 135 -~pgd~V~ip~P~w~~y~~i~~~aG~---~~V~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~~vll~~~p~NPtG~~~ 207 (420)
T 4h51_A 135 -AETTPIYLSDPTWPNHYGVVKAAGW---KNICTYAYYDPKTVSLNFEGMKKDILAAP---DGSVFILHQCAHNPTGVDP 207 (420)
T ss_dssp -TTTSCEEEEESCCTHHHHHHHHTTC---CCEEEEECEEGGGTEECHHHHHHHHHHSC---SSCEEEEESSSCTTTCCCC
T ss_pred -CCCCEEEEecCCchhHHHHHHHcCC---eEEEeeccccccccCCCHHHHHHHHhccC---CCcEEEEeCCCCCCCCCCC
Confidence 1567789999999999999999998 6 444444333457899999998887643 234567778899999998
Q ss_pred --cChhHHHHHHHHhCCEEEeecccccccccCccc-----hhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchh--
Q 048643 266 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF-----QHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSA-- 335 (506)
Q Consensus 266 --dpl~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~-----~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~-- 335 (506)
+.+++|+++|++++++++.|.+|.++..-.... +.... ...--.++.++.|.++.+ .-+|++.+.....
T Consensus 208 ~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~ 286 (420)
T 4h51_A 208 SQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFAR-RGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK 286 (420)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH-TTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH
T ss_pred CHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHh-hCceEEEEeccccccccccCceEEEEecccCHHH
Confidence 568899999999999999999998765321111 01111 001123445688987654 5688877654321
Q ss_pred HHhhhcCCccccCCccccCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hhHHHHHHHHHHHHHHHHHHHHH
Q 048643 336 LVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWLVIRNYG--------VANLRHFLRSHVNMAKLFERLVA 407 (506)
Q Consensus 336 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G--------~~g~~~~i~~~~~~a~~l~~~l~ 407 (506)
.....+ .-..+... +..+ ........+...+. .+-++.+.++..++++.|.+.|+
T Consensus 287 ~~~~~~-~l~~~~r~-------------~~s~---~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~ 349 (420)
T 4h51_A 287 RADVKS-VMDSLIRE-------------EYTC---PPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELL 349 (420)
T ss_dssp HHHHHH-HHHHHHHT-------------TTSS---CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHhhhc-------------ccCc---chHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111110 00000000 0000 01122222222222 23456677888888999999998
Q ss_pred cCC---CCc----c-ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCC
Q 048643 408 SDK---RVS----P-SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLT 479 (506)
Q Consensus 408 ~~~---~~~----p-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 479 (506)
+.. .|. + ++++|- +- +. +..+.|.+.|+ |+.+. | |++++. .
T Consensus 350 ~~g~~~~~~~i~~q~GmF~~~--gl-----------s~--------e~v~~L~e~~V-y~~~~---g----Ris~Ag--l 398 (420)
T 4h51_A 350 RLQTPGSWEHVINQIGMFSFL--GL-----------SK--------AQCEYCQNHNI-FITVS---G----RANMAG--L 398 (420)
T ss_dssp HTTCSSCCTHHHHCCSSEEEC--CC-----------CH--------HHHHHHHHTTE-ECCTT---C----EEEGGG--C
T ss_pred HhCCCCCCCeecCCCceEEec--Cc-----------CH--------HHHHHHHhCCE-EEcCC---C----EEEecc--C
Confidence 752 244 2 666652 22 11 11244555665 44432 2 999864 4
Q ss_pred CHHHHHHHHHHHHHHHHHHHcc
Q 048643 480 EERHVMVAWTMVQEQLEAFLTT 501 (506)
Q Consensus 480 t~edi~~li~~l~~~~~~l~~~ 501 (506)
+++.|+.+.++|.++.+++.++
T Consensus 399 ~~~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 399 THETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp CHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHHHHHhhcC
Confidence 7779999999999999887653
No 232
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.39 E-value=2.9e-12 Score=132.26 Aligned_cols=285 Identities=8% Similarity=-0.057 Sum_probs=173.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHH
Q 048643 130 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQ 209 (506)
Q Consensus 130 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~ 209 (506)
..++++.+.+|+.+..+...+ ....++|+|+++++..++.+.... .......++..|+++...|..+...++
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~-----~~~iv~t~G~~~al~~~~~~l~~~---~~~~~~~~Gd~Vlv~~P~y~~~~~~~~ 173 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAK-----DRYIVFGVGVTQLIHGLVISLSPN---MTATPDAPESKVVAHAPFYPVFREQTK 173 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCT-----TCEEEEESHHHHHHHHHHHHHSCC---TTTCTTSCCEEEEECSSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCcCCC-----CCEEEEeCCHHHHHHHHHHHHhhc---cccccCCCCCEEEEeCCCcccHHHHHH
Confidence 688999999999876553211 126899999999887776654100 000000166789999999999999999
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 289 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~g 289 (506)
..|. +++. +.+|+++|++++++. +.+|+++.++|+||.+-+ + + ++ +++.+.|.++.
T Consensus 174 ~~g~---~~~~--------~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~ 229 (427)
T 2hox_A 174 YFDK---KGYV--------WAGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYY 229 (427)
T ss_dssp HSCB---TTEE--------EEEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTC
T ss_pred HcCC---eeee--------ecCCHHHHHHhhcCC------ceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeeccc
Confidence 9998 6653 356778888777543 347788899999999988 4 2 23 66788887763
Q ss_pred cccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCC
Q 048643 290 GSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLS 368 (506)
Q Consensus 290 g~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 368 (506)
... ...... ....+.+..+++|.++.| ..+|+++++++.... .+.....+...
T Consensus 230 ~~~---~s~~~~---~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~-~l~~~~~~~~~------------------- 283 (427)
T 2hox_A 230 WPH---YTPIKY---KADEDILLFTMSKFTGHSGSRFGWALIKDESVYN-NLLNYMTKNTE------------------- 283 (427)
T ss_dssp STT---TSCCCS---CBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHH-HHHHHHHHHTS-------------------
T ss_pred CCC---CCcccc---CCCceEEEEeChhcCCCCCceEEEEEECCHHHHH-HHHHHHHhcCC-------------------
Confidence 211 011111 035788999999998754 458998887655433 22111111100
Q ss_pred CCCCchHHHHHHHHh--c-----------hhHHHHHHHHHHHHHHHHHHHHHcCCCC--------------c---c---c
Q 048643 369 RRFRSLKLWLVIRNY--G-----------VANLRHFLRSHVNMAKLFERLVASDKRV--------------S---P---S 415 (506)
Q Consensus 369 r~~~al~~~~~l~~~--G-----------~~g~~~~i~~~~~~a~~l~~~l~~~~~~--------------~---p---~ 415 (506)
....+..+++...+ + .+.++++.++..++.+++.+.|++.+++ + | .
T Consensus 284 -~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~ 362 (427)
T 2hox_A 284 -GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPS 362 (427)
T ss_dssp -SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCS
T ss_pred -CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCce
Confidence 00112222222222 1 2334566677888899999999886432 2 3 2
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC-CEEEEEEEecCCCCCHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESIN-ASGKAYMTHAVCG-GIYAMRFAVGATLTEERHVMVAWTMVQE 493 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~edi~~li~~l~~ 493 (506)
.+.+++... ..++.+++. +.|+....+..+. +..++|+++.+ ++++|+++++.|.+
T Consensus 363 f~~~~~~~~-------------------~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~---~~e~l~~~l~~l~~ 420 (427)
T 2hox_A 363 YAWVKCEWE-------------------EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK---TQDDFDQLMYYLKD 420 (427)
T ss_dssp EEEEEECSG-------------------GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS---CHHHHHHHHHHHHH
T ss_pred EEEEECCCc-------------------HHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC---CHHHHHHHHHHHHH
Confidence 333444321 123444443 4576433333232 35789999963 77789999988877
Q ss_pred HH
Q 048643 494 QL 495 (506)
Q Consensus 494 ~~ 495 (506)
+.
T Consensus 421 ~~ 422 (427)
T 2hox_A 421 MV 422 (427)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 233
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.34 E-value=6.7e-10 Score=115.47 Aligned_cols=327 Identities=9% Similarity=0.036 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHH
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQI 210 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~ 210 (506)
++.+.++.+.|+++...+-+ ..+|+++||+||..|+.+||.....+ |..+ +..+|-.....|-...-++..
T Consensus 110 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGsEA~e~AiKlAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~ 180 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDSG-------RVFYTNSGSEANDTMVKMLWFLHAAE-GKPQ-KRKILTRWNAYHGVTAVSASM 180 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSSC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCcc-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-cceEEEeeceECCCccccccc
Confidence 34455567888888765433 57899999999999999998754332 2111 233444455566444444433
Q ss_pred hC--------CCCCCeEEEecCCC----CCccc-------CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----
Q 048643 211 VG--------IDLKNFRAIKTTKS----SSYGL-------SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP---- 267 (506)
Q Consensus 211 ~G--------~g~~~v~~v~~~~~----~~~~~-------d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp---- 267 (506)
.| .....+..++.... ..+.. ..++|++.|.+.. .....+|++.-.....|.+-|
T Consensus 181 tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~~f 258 (473)
T 4e3q_A 181 TGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAKGY 258 (473)
T ss_dssp SCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTH
T ss_pred cccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCHHH
Confidence 33 22234555554210 00111 1234555554421 123455666544445676644
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 048643 268 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEY 346 (506)
Q Consensus 268 l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 346 (506)
+++|.++|++||+.|++|+.+.|+.....-+.....|+ ..|.+++. |.++.. ++.|+++++++-. +.+......
T Consensus 259 l~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~~--K~l~gG~~Pl~av~~~~~i~--~~~~~~~~~ 333 (473)
T 4e3q_A 259 FQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIISS--KNLTAGFFPMGAVILGPELS--KRLETAIEA 333 (473)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEEC--GGGGTTSSCCEEEEECHHHH--HHHHHHHHH
T ss_pred HHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHhc--ccccCCCCCcccccccHHHH--HHhcccccc
Confidence 89999999999999999999988755443333333345 57888865 888665 6788888876421 222111000
Q ss_pred cCCccccCCCccCCCCccccCCCCCCchHH---HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcC---CCCc-c----c
Q 048643 347 LKNKATESKQVVDYKDWQITLSRRFRSLKL---WLVIRNYGVANLRHFLRSHVNMAKLFERLVASD---KRVS-P----S 415 (506)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~-p----~ 415 (506)
... +....+-...++.. ..+|+.+-+++ ++++..++..+|.++|+++ |.+. . .
T Consensus 334 ~~~-------------~~hg~T~~Gnpla~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl 397 (473)
T 4e3q_A 334 IEE-------------FPHGFTASGHPVGCAIALKAIDVVMNEG---LAENVRRLAPRFEERLKHIAERPNIGEYRGIGF 397 (473)
T ss_dssp HSC-------------CCCCCTTTTCHHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETT
T ss_pred ccc-------------cccCCCCCCCcchhhhhhhhhhhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCeeEEeecce
Confidence 000 00001111233333 44455554444 4455566778888887654 3322 1 3
Q ss_pred eEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 048643 416 AVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQL 495 (506)
Q Consensus 416 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~ 495 (506)
++.+.+........ ..+ .......++.+.+.++|.+ +.+. | ..+|++. ....|++|||++++.|+++.
T Consensus 398 ~~gielv~~~~~~~----~~~--~~~~~~~~~~~~~~~~Gll-~~~~---g-~~i~l~P-PL~it~~eid~~~~~l~~al 465 (473)
T 4e3q_A 398 MWALEAVKDKASKT----PFD--GNLSVSERIANTCTDLGLI-CRPL---G-QSVVLCP-PFILTEAQMDEMFDKLEKAL 465 (473)
T ss_dssp EEEEEECSBTTTTB----CCC--GGGCHHHHHHHHHHHTTEE-CEEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCccccc----ccc--ccHHHHHHHHHHHHHCCcE-EEec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Confidence 34444432210000 000 0012456778888888974 3322 2 3688875 35678999999999999998
Q ss_pred HHHHcc
Q 048643 496 EAFLTT 501 (506)
Q Consensus 496 ~~l~~~ 501 (506)
+++.++
T Consensus 466 ~~v~ae 471 (473)
T 4e3q_A 466 DKVFAE 471 (473)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.32 E-value=3e-09 Score=110.18 Aligned_cols=313 Identities=12% Similarity=0.025 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhC
Q 048643 133 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVG 212 (506)
Q Consensus 133 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G 212 (506)
.+.++.+.|++++..+.. ...+|+++||+||..||..||...- ++.+|......|-...-+....|
T Consensus 108 ~~~~lae~L~~~~p~~~~------~~v~f~~sGsEA~e~AlklAr~~t~--------r~~ii~~~~~yHG~t~~als~t~ 173 (456)
T 4atq_A 108 GYVAVTEQLNRLTPGDHA------KRTVLFNSGAEAVENAVKVARLATG--------RDAVVAFDHAYHGRTNLTMALTA 173 (456)
T ss_dssp HHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHHC--------CCEEEEETTCCCCSSHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCCCC------cEEEEeCChHHHHHHHHHHHhhhhc--------CCeEEEEecccCCcccccccccc
Confidence 344556778888743321 1468899999999999999987530 23344455556644443433333
Q ss_pred CC----------CCCeEEEecCCC----CCcccCHHHHHHHHHHHHh--cCCccEEEEEeccCCCCCcccC----hhHHH
Q 048643 213 ID----------LKNFRAIKTTKS----SSYGLSPDSLLTQINLDVE--AGLVPLFLCATIGTTAITAVDP----LKPLC 272 (506)
Q Consensus 213 ~g----------~~~v~~v~~~~~----~~~~~d~~~L~~~i~~~~~--~g~~p~~Vv~t~gtt~tG~idp----l~~I~ 272 (506)
-. ...+..+|.... .....+.+.+++.++...+ .+..+..|++.-.....|.+-| +++|.
T Consensus 174 ~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr 253 (456)
T 4atq_A 174 KAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALS 253 (456)
T ss_dssp CCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHH
T ss_pred CccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHH
Confidence 21 124666765321 0112345566655543221 2334556666544445676644 89999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 048643 273 DVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLSTNPEYLKNKAT 352 (506)
Q Consensus 273 ~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 352 (506)
++|++||+.|++|+.+.|+.....-+.....|+ ..|.+++. |.++..++.|.++.+++- ...+. +....
T Consensus 254 ~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av~~~~~i--~~~~~--~~~~~---- 322 (456)
T 4atq_A 254 EWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAITGRADL--LDAVH--PGGLG---- 322 (456)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEEEEEHHH--HTTSC--TTSSC----
T ss_pred HHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceeeEecHHH--Hhccc--ccCCC----
Confidence 999999999999999988654433333333355 57988886 777766778888887542 12221 10000
Q ss_pred cCCCccCCCCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHc----CCC-----Cc-c----ceEE
Q 048643 353 ESKQVVDYKDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVAS----DKR-----VS-P----SAVM 418 (506)
Q Consensus 353 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~----~~~-----~~-p----~~v~ 418 (506)
.|+ .+.+.......++|+.+-++++ +++..++.++|.+.|++ .+. +. . .++.
T Consensus 323 ----------~Tf-~gnpla~aaala~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~g 388 (456)
T 4atq_A 323 ----------GTY-GGNPVACAAALAAIDTMEQHDL---NGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLA 388 (456)
T ss_dssp ----------CSS-SSCHHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEE
T ss_pred ----------CCC-CCChHHHHhhHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEE
Confidence 011 1111122333444555544544 44555566666666654 221 11 1 3344
Q ss_pred EeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 048643 419 DKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEA 497 (506)
Q Consensus 419 f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~ 497 (506)
+.+..+... . ...+...++.+.+.++|.+...... . ...||++. ....|+++||++++.|++..+.
T Consensus 389 iel~~~~~~------~----~~~~~~~~v~~~~~~~Gvl~~~~g~-~-~~~irl~P-pL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 389 IELVQPGSK------E----PNAELTKAVAAACLKEGVIILTCGT-Y-GNVIRLLP-PLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp EEEBCTTSC------C----BCHHHHHHHHHHHHHTTEECEEECT-T-SCEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCC------C----cCHHHHHHHHHHHHHCCCEEEecCC-C-CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 444322100 0 0134567788888899975432211 2 25789886 3456889999999999988653
No 235
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.93 E-value=3.9e-13 Score=139.68 Aligned_cols=304 Identities=10% Similarity=-0.057 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHH--
Q 048643 131 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAA-- 208 (506)
Q Consensus 131 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~-- 208 (506)
...+.++.+.|+++++ ..+ ..++++|||+||..|+.++|... . ++.+|......|-+...+.
T Consensus 139 ~~~~~~Lae~L~~~~p-~~~-------~v~~~nSGseA~~~Aik~ar~~t-g-------r~~ii~~~~~yHG~~~~~~sg 202 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SID-------LVRFTNSGTEANLMALATATAIT-G-------RKTVLAFDGGYHGGLLNFASG 202 (465)
Confidence 4455566677777773 122 56899999999999999987531 0 2234444444554444333
Q ss_pred -HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC----hhHHHHHHHHhCCEEE
Q 048643 209 -QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVH 283 (506)
Q Consensus 209 -~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp----l~~I~~ia~~~g~~lh 283 (506)
...|+.. .++.+| ..|+++|+++|++. +..+.+|++....+++|.+-| +++|+++|++||++++
T Consensus 203 ~~~~g~~~-~~~~~~-------~~d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI 271 (465)
T 2yky_A 203 HAPTNAPY-HVVLGV-------YNDVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLI 271 (465)
Confidence 1122211 223333 13789999999742 112335666554556897766 9999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEcCccccCCCCcceEEEEeCchhHHhhhcC---CccccCCccccCCCccCC
Q 048643 284 VDAAYAGSACICPEFQHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSALVSSLST---NPEYLKNKATESKQVVDY 360 (506)
Q Consensus 284 VDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~~~ 360 (506)
+|++|. + ...+.......++ ..|.++ ..|+++..+..|+++.+..- .+.+.. .+-+...
T Consensus 272 ~DEv~~-~-r~g~~~a~~~~gv-~pDi~t--~sK~lg~G~piG~v~~~~~i--~~~l~~~~~g~~~~~~----------- 333 (465)
T 2yky_A 272 FDEVMT-S-RLSGGGAQEMLGI-SADLTT--LGKYIGGGMSFGAFGGRRDL--MERFDPARDGAFAHAG----------- 333 (465)
Confidence 999998 4 2211110001122 356554 56999877778887776431 222221 0001100
Q ss_pred CCccccCCCCCCchHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHcCC---CC--c-c---ceEEEeecCCCcccccc
Q 048643 361 KDWQITLSRRFRSLKLWLVIRNYGVANLRHFLRSHVNMAKLFERLVASDK---RV--S-P---SAVMDKLKPKYENCHSQ 431 (506)
Q Consensus 361 ~~~~~~~sr~~~al~~~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~---~~--~-p---~~v~f~~~~~~~~~~~~ 431 (506)
++ .+.+.......++|+.+-.+ ++.++..++.++|+++|++.. ++ . + .++.|.+........
T Consensus 334 ---T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~-- 404 (465)
T 2yky_A 334 ---TF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSA-- 404 (465)
Confidence 11 11111222333445544333 356677777888888876641 12 1 2 556665532100000
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 048643 432 QLVTEEEAINEFNRELLESINASGKAYMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAFL 499 (506)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l~ 499 (506)
......-.+...++.+.+.++|++ +.+.... . ++ ...+++||++++++|+++.+++.
T Consensus 405 --~~~~~~d~~~~~~~~~~ll~~GV~-v~p~~~~---~--~s---~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 405 --GDVRAADQQLKELFFFHMLRKGIY-LAPRGMY---A--LS---LEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 000000012345677788888874 4332221 1 33 34578899999999998877653
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.10 E-value=2.7e-09 Score=118.26 Aligned_cols=323 Identities=14% Similarity=0.019 Sum_probs=167.9
Q ss_pred HHHHHHHHHcCCCCccccCCCCcEEEcCCchHHHHHHHHHHHHHHHHhhcccC-------CCCeEEEeCCCCchHHHHHH
Q 048643 136 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN-------ISKLVVYGSDQTHCALQKAA 208 (506)
Q Consensus 136 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~-------~~~~~v~~s~~~H~s~~ka~ 208 (506)
++.+.|+++++-+.- ...+|+++||+||..||.+|+..+....|... .+..+|......|-+..-++
T Consensus 428 ~Lae~L~~~~p~~~l------~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gal 501 (831)
T 4a0g_A 428 KCAELLLDGVGKGWA------SRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAM 501 (831)
T ss_dssp HHHHHHHHTTTTTTC------CEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHH
T ss_pred HHHHHHHHhCCCCCC------CEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeee
Confidence 445667777653211 15799999999999999999543322222210 12235555666787777777
Q ss_pred HHhCCCC-------------------------CCeEEEecCCC------CC-cccC------------------HHHHHH
Q 048643 209 QIVGIDL-------------------------KNFRAIKTTKS------SS-YGLS------------------PDSLLT 238 (506)
Q Consensus 209 ~~~G~g~-------------------------~~v~~v~~~~~------~~-~~~d------------------~~~L~~ 238 (506)
...|... ..+..++.... ++ ..-+ .++|++
T Consensus 502 s~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 581 (831)
T 4a0g_A 502 EAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSK 581 (831)
T ss_dssp HTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHH
T ss_pred eccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHH
Confidence 7665310 01112222110 00 0011 256777
Q ss_pred HHHHHH--hcCCccEEEEEecc-CCCCCcccC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCee
Q 048643 239 QINLDV--EAGLVPLFLCATIG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFQHFIDGVEGADSF 311 (506)
Q Consensus 239 ~i~~~~--~~g~~p~~Vv~t~g-tt~tG~idp----l~~I~~ia~~~g~~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi 311 (506)
.|++.. ..+..+.+|++.-. ....|.+-+ +++|.++|++||+++++|.++.|+......+.....|+ ..|.+
T Consensus 582 ~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDii 660 (831)
T 4a0g_A 582 HLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-KPDIA 660 (831)
T ss_dssp HC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-CCSEE
T ss_pred HHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-CCcEE
Confidence 665421 11233445555432 345566644 99999999999999999999887644333222222244 46877
Q ss_pred EEcCccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccCCCccCCCCccccCCCCCCch---HHHHHHHHhchhH
Q 048643 312 SLNAHKWFFTT-LDCCCLWVKDPSALVSSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSL---KLWLVIRNYGVAN 387 (506)
Q Consensus 312 ~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al---~~~~~l~~~G~~g 387 (506)
|+ -|.++.. .+.|++++++. +.+.+...... ..+....+....++ ...++|+.+-.+.
T Consensus 661 tl--sK~L~gG~~Plgav~~~~~--i~~~~~~~~~~--------------~~~~hg~T~~g~Pla~Aaala~L~~i~~~~ 722 (831)
T 4a0g_A 661 CF--AKLLTGGMVPLAVTLATDA--VFDSFSGDSKL--------------KALLHGHSYSAHAMGCATAAKAIQWFKDPE 722 (831)
T ss_dssp EE--CGGGGTTSSCCEEEEECHH--HHHTTCSSCGG--------------GSCCCCCTTTTCHHHHHHHHHHHHHHHCTT
T ss_pred EE--ecccccCccCcEEEEECHH--HHHHHhccccc--------------ccceeecCCcccHHHHHHHHHHHHHHHhhH
Confidence 65 5888765 36788887653 22333221100 00000111112333 3344444443333
Q ss_pred HHHHHHHH-HHH----HHHHHHHHHcCCCCc---c--ceEEEeecCCCcccccccccchHHHHHHHHHHHHHHHHhcCcE
Q 048643 388 LRHFLRSH-VNM----AKLFERLVASDKRVS---P--SAVMDKLKPKYENCHSQQLVTEEEAINEFNRELLESINASGKA 457 (506)
Q Consensus 388 ~~~~i~~~-~~~----a~~l~~~l~~~~~~~---p--~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 457 (506)
+.+.+.+. ..+ .+.+.+.+.+.|.+. . .++.+.+..... ..........++.+.+.++|.+
T Consensus 723 l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~---------~~~~~~~~a~~~~~~l~e~Gv~ 793 (831)
T 4a0g_A 723 TNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADAS---------NSGYASLYAKSLLIMLREDGIF 793 (831)
T ss_dssp TCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC------------------CHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCcc---------ccccchHHHHHHHHHHHHCCcE
Confidence 22222111 111 223445566666544 1 555555543200 0000012345677888888874
Q ss_pred EEeeeeECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 048643 458 YMTHAVCGGIYAMRFAVGATLTEERHVMVAWTMVQEQLEAF 498 (506)
Q Consensus 458 ~~~~~~~~g~~~lR~~~~~~~tt~edi~~li~~l~~~~~~l 498 (506)
+.+. + ..+|++. .+.+++++|+++++.|.++.+++
T Consensus 794 -v~p~---g-~~lrl~p-p~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 794 -TRPL---G-NVIYLMC-GPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp -CCCB---T-TEEEEEC-CTTCCHHHHHHHHHHHHHHHTTT
T ss_pred -EEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 4432 2 5799987 46779999999999999887654
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=71.94 E-value=21 Score=33.40 Aligned_cols=67 Identities=12% Similarity=0.013 Sum_probs=43.8
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
++++. -.--...+.++-+|- ++..+++| --|.+++++.+++..++-.+.-++|-++|....+.+.++
T Consensus 56 V~i~~-r~~~~l~~~~~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~ 122 (273)
T 4fgs_A 56 VFITG-RRKDVLDAAIAEIGG---GAVGIQAD-----SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEV 122 (273)
T ss_dssp EEEEE-SCHHHHHHHHHHHCT---TCEEEECC-----TTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSC
T ss_pred EEEEE-CCHHHHHHHHHHcCC---CeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhc
Confidence 44444 333456677777776 78888887 447888888877665443345567778887777666543
No 238
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=71.30 E-value=19 Score=32.40 Aligned_cols=71 Identities=6% Similarity=0.020 Sum_probs=52.5
Q ss_pred chHHHHHHHHh-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--cChhHHHHHHHH
Q 048643 201 HCALQKAAQIV-GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--DPLKPLCDVAKQ 277 (506)
Q Consensus 201 H~s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--dpl~~I~~ia~~ 277 (506)
-.+++.++.++ .+|...+.+.|.. |.-.++.|++.-+.+.++|. .+ -+||-| |++++|.++|.+
T Consensus 144 ~V~vetAiaml~dmG~~SvKffPm~----Gl~~l~E~~avAka~a~~g~-----~l----EPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 144 IVPLETAIALLKDMGGSSIKYFPMG----GLKHRAEFEAVAKACAAHDF-----WL----EPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp EEEHHHHHHHHHHTTCCEEEECCCT----TTTTHHHHHHHHHHHHHTTC-----EE----EEBSSCCTTTHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhhHHHHHHHHHH
Confidence 34567666554 5666689999985 46678899988888888884 11 257777 689999999999
Q ss_pred hCCEEEe
Q 048643 278 FGIWVHV 284 (506)
Q Consensus 278 ~g~~lhV 284 (506)
.|+..++
T Consensus 211 aGv~~vi 217 (249)
T 3m0z_A 211 AGVSKII 217 (249)
T ss_dssp HTCSCBC
T ss_pred cCCCeec
Confidence 9976644
No 239
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=67.51 E-value=40 Score=31.09 Aligned_cols=67 Identities=10% Similarity=-0.005 Sum_probs=43.4
Q ss_pred EEEeCCCCchHHHHHHH---HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 193 VVYGSDQTHCALQKAAQ---IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
.|++.+.......+.++ -.|. ++..+.+| --|.+++++.+++..++...+-++|-++|....+.+.+
T Consensus 35 ~Vvi~~~~~~~~~~~~~~l~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~ 104 (255)
T 4g81_D 35 RVILNDIRATLLAESVDTLTRKGY---DAHGVAFD-----VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVE 104 (255)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTC---CEEECCCC-----TTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGG
T ss_pred EEEEEECCHHHHHHHHHHHHhcCC---cEEEEEee-----CCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhh
Confidence 34444333334444433 3355 78888877 45788999988887766556667888888777766643
No 240
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=63.59 E-value=24 Score=32.18 Aligned_cols=70 Identities=7% Similarity=0.110 Sum_probs=50.9
Q ss_pred hHHHHHHHHh-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc--cChhHHHHHHHHh
Q 048643 202 CALQKAAQIV-GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV--DPLKPLCDVAKQF 278 (506)
Q Consensus 202 ~s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i--dpl~~I~~ia~~~ 278 (506)
.+++.++.++ .+|...+.+.|.. |.-.++.|++.-+.+.++|. ++ -+||-| |++++|.++|.+.
T Consensus 168 V~vetAiaml~dmG~~SvKffPM~----Gl~~leEl~avAkAca~~g~-----~l----EPTGGIdl~Nf~~I~~i~l~a 234 (275)
T 3m6y_A 168 VPIKTAIALVRDMGGNSLKYFPMK----GLAHEEEYRAVAKACAEEGF-----AL----EPTGGIDKENFETIVRIALEA 234 (275)
T ss_dssp EEHHHHHHHHHHHTCCEEEECCCT----TTTTHHHHHHHHHHHHHHTC-----EE----EEBSSCCTTTHHHHHHHHHHT
T ss_pred eeHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhHHHHHHHHHHHc
Confidence 3566666554 4455688999985 45678899888888888774 11 257777 6899999999999
Q ss_pred CCEEEe
Q 048643 279 GIWVHV 284 (506)
Q Consensus 279 g~~lhV 284 (506)
|+..++
T Consensus 235 Gv~~vi 240 (275)
T 3m6y_A 235 NVEQVI 240 (275)
T ss_dssp TCSCBC
T ss_pred CCCeec
Confidence 976543
No 241
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=62.76 E-value=13 Score=33.03 Aligned_cols=51 Identities=18% Similarity=0.138 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
.-+=|.+++-.+-+|..|..|++..-.+..|..-.++++.++|++||+.++
T Consensus 143 ~GHTEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 143 RGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CCHHHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CCcHHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 335567777777789999998887775678999999999999999999875
No 242
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=62.57 E-value=12 Score=35.76 Aligned_cols=58 Identities=17% Similarity=0.089 Sum_probs=45.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 30 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 3679999999999999888887777777777777777777778888877664 366654
No 243
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=62.41 E-value=10 Score=36.42 Aligned_cols=58 Identities=10% Similarity=0.036 Sum_probs=47.6
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh--CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~--g~~lhV 284 (506)
.++.+|.+.|++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 4679999999999999988887777778888888887888888888887775 467765
No 244
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=62.37 E-value=10 Score=36.18 Aligned_cols=58 Identities=17% Similarity=0.067 Sum_probs=45.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
.++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4679999999999998888887777777777777777777777888877664 466655
No 245
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=60.46 E-value=12 Score=35.41 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=45.6
Q ss_pred CCcccCHHHHHHHHHHHHh-cCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVE-AGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~-~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...+ .|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 17 ~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 17 EDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp TTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3579999999999999888 887777777888887777778888888877764 366653
No 246
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=58.79 E-value=57 Score=29.91 Aligned_cols=60 Identities=12% Similarity=-0.053 Sum_probs=35.4
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
......+.+..+|. ++..+.+| --|.+.+++.+++..+....+-+||-++|....+.+.+
T Consensus 60 ~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~ 119 (266)
T 3grp_A 60 REDKLKEIAADLGK---DVFVFSAN-----LSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVR 119 (266)
T ss_dssp CHHHHHHHHHHHCS---SEEEEECC-----TTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CC
T ss_pred CHHHHHHHHHHhCC---ceEEEEee-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 33445556666676 88888887 34777888777765443234557777888766555443
No 247
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.05 E-value=6.8 Score=37.42 Aligned_cols=58 Identities=12% Similarity=0.261 Sum_probs=44.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.+++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888887777777777777777777777888877664 466655
No 248
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=56.76 E-value=25 Score=31.29 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEecc-CCCCCcccChhHHHHHHHHhCCEEE
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIG-TTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~g-tt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
..+=|.+++-.+-+|..|..|++... .+..|..-.++++.++|++||+.++
T Consensus 142 ~GhTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 142 PGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp CCHHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CChHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 34667778777778999998888772 5678999999999999999999885
No 249
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=56.64 E-value=4.6 Score=38.59 Aligned_cols=58 Identities=10% Similarity=0.076 Sum_probs=43.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 26 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 26 INGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 3579999999999998888887666677777777666667777777777654 355543
No 250
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=55.27 E-value=11 Score=35.79 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=44.6
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++++|.+.+++.++...+.|-.-++++.|.|...+=+.+.-.++.+.+.+. .+.+++
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3679999999999998888887777777777777777777777888877664 356655
No 251
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=55.23 E-value=9.5 Score=36.61 Aligned_cols=59 Identities=15% Similarity=0.127 Sum_probs=46.9
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 226 SSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 226 ~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++++.+|.+.+++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 37 ~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 37 AADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34679999999999999888887777778888887777778888888887764 355554
No 252
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=55.19 E-value=16 Score=35.74 Aligned_cols=58 Identities=14% Similarity=0.109 Sum_probs=44.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++++|.+.|++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 73 ~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4679999999999998888887777777777777777777777777776654 366655
No 253
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=54.75 E-value=12 Score=35.58 Aligned_cols=52 Identities=10% Similarity=0.064 Sum_probs=42.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+.
T Consensus 17 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 17 TDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 3679999999999999888887777777777777777777788888888775
No 254
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=54.64 E-value=10 Score=36.32 Aligned_cols=57 Identities=18% Similarity=0.102 Sum_probs=47.0
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++.+|.+.|++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 579999999999999888888788888888888888888888888888765 355544
No 255
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=54.57 E-value=59 Score=29.32 Aligned_cols=65 Identities=22% Similarity=0.055 Sum_probs=39.7
Q ss_pred EEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 194 VYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 194 v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
|++.........+.+..+|. ++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+.
T Consensus 33 V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 97 (247)
T 3rwb_A 33 VIVSDINAEGAKAAAASIGK---KARAIAAD-----ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWD 97 (247)
T ss_dssp EEEECSCHHHHHHHHHHHCT---TEEECCCC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGG
T ss_pred EEEEeCCHHHHHHHHHHhCC---ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcc
Confidence 33333334455566666666 88888877 3477888887776543322345677788876665553
No 256
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=53.69 E-value=70 Score=29.49 Aligned_cols=65 Identities=14% Similarity=0.008 Sum_probs=40.0
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
+++++ .......+.+..+|- ++..+++| --|.+.+++.+++..+.-..+-++|-++|....+.+.
T Consensus 54 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~ 118 (277)
T 4dqx_A 54 VVVAD-VNEDAAVRVANEIGS---KAFGVRVD-----VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVV 118 (277)
T ss_dssp EEEEE-SSHHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred EEEEe-CCHHHHHHHHHHhCC---ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcc
Confidence 44443 333445555555666 78888887 3477888887776544322455778888866655553
No 257
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=53.67 E-value=13 Score=36.04 Aligned_cols=58 Identities=7% Similarity=-0.040 Sum_probs=44.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 48 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 48 EAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888887666777777777776777777888877664 366655
No 258
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=53.61 E-value=11 Score=35.73 Aligned_cols=57 Identities=19% Similarity=0.162 Sum_probs=43.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEE
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVH 283 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lh 283 (506)
+++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.++
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (292)
T 2ojp_A 15 EKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVI 74 (292)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 3579999999999998888887767777777777777777777888877664 35554
No 259
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=53.55 E-value=10 Score=36.42 Aligned_cols=58 Identities=9% Similarity=0.133 Sum_probs=45.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 36 ~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 36 DNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4679999999999999888887777777777777777777778888877764 355554
No 260
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=53.54 E-value=11 Score=35.70 Aligned_cols=58 Identities=14% Similarity=0.157 Sum_probs=44.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 15 KDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3679999999999998888887777777777777777777778888877664 355554
No 261
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=53.18 E-value=11 Score=36.03 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=45.4
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
.++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 37 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 37 AQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4679999999999998888887777777888887777778888888877664 356655
No 262
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=53.14 E-value=12 Score=35.80 Aligned_cols=58 Identities=5% Similarity=-0.052 Sum_probs=46.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++++|.+.|++.++...+.|-.-++|+.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 28 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 28 ATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp TTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 3579999999999998888887777788888888887788888888888775 466654
No 263
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=52.80 E-value=65 Score=29.72 Aligned_cols=65 Identities=17% Similarity=0.073 Sum_probs=39.6
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++++. .......+.+..+|. ++..+++| --|.+.+++.+++..+.-..+-++|-++|....+.+.
T Consensus 56 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~ 120 (277)
T 3gvc_A 56 VLCAD-IDGDAADAAATKIGC---GAAACRVD-----VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLI 120 (277)
T ss_dssp EEEEE-SSHHHHHHHHHHHCS---SCEEEECC-----TTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTT
T ss_pred EEEEe-CCHHHHHHHHHHcCC---cceEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChh
Confidence 34443 333455556666666 78888877 3477888887776544323455777788766555543
No 264
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=51.90 E-value=86 Score=28.37 Aligned_cols=64 Identities=17% Similarity=0.071 Sum_probs=40.1
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++ .......+.+..++- ++..+++| --|.+.+++.+++..+....+-+||-++|....+.+
T Consensus 35 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 98 (259)
T 4e6p_A 35 VAIAD-IDIERARQAAAEIGP---AAYAVQMD-----VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPI 98 (259)
T ss_dssp EEEEE-SCHHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCG
T ss_pred EEEEe-CCHHHHHHHHHHhCC---CceEEEee-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 34443 334445555666665 78888876 347888888887665443345677778876655544
No 265
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=51.69 E-value=29 Score=31.88 Aligned_cols=77 Identities=10% Similarity=0.067 Sum_probs=52.2
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC--CcccChhHHHHHHHH--
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI--TAVDPLKPLCDVAKQ-- 277 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t--G~idpl~~I~~ia~~-- 277 (506)
-.+.+-|+-+|+ .++.|.. +.-.|+.+...+.|+...+.|.++ ....|.-.. ....+..++.+.+++
T Consensus 88 ~~yl~~~k~lGf---~~iEiS~---G~i~l~~~~~~~~I~~~~~~G~~v---~~EvG~k~~~~~~~~~~~~~I~~~~~~L 158 (251)
T 1qwg_A 88 DEFLNECEKLGF---EAVEISD---GSSDISLEERNNAIKRAKDNGFMV---LTEVGKKMPDKDKQLTIDDRIKLINFDL 158 (251)
T ss_dssp HHHHHHHHHHTC---CEEEECC---SSSCCCHHHHHHHHHHHHHTTCEE---EEEECCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---CEEEECC---CcccCCHHHHHHHHHHHHHCCCEE---eeeccccCCcccCCCCHHHHHHHHHHHH
Confidence 356778889999 8888863 346789999999999988888543 334444333 344566667666664
Q ss_pred -hCCEEEeecc
Q 048643 278 -FGIWVHVDAA 287 (506)
Q Consensus 278 -~g~~lhVDaA 287 (506)
.|+|.++=.+
T Consensus 159 eAGA~~ViiEa 169 (251)
T 1qwg_A 159 DAGADYVIIEG 169 (251)
T ss_dssp HHTCSEEEECC
T ss_pred HCCCcEEEEee
Confidence 5876654333
No 266
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=51.13 E-value=12 Score=35.42 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=41.3
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 13 KDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 3579999999999999888887666677777777776677778888887765
No 267
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=50.30 E-value=1.3e+02 Score=26.76 Aligned_cols=49 Identities=14% Similarity=-0.003 Sum_probs=33.9
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
..|. ++..+.+| --|.+.+++.+++..+....+-+|+-++|....+.+.
T Consensus 51 ~~~~---~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~ 99 (247)
T 3lyl_A 51 EKGF---KARGLVLN-----ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMM 99 (247)
T ss_dssp HTTC---CEEEEECC-----TTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGG
T ss_pred hcCC---ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchh
Confidence 3355 78888887 3478888888887665544566788888876655543
No 268
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=50.25 E-value=11 Score=36.12 Aligned_cols=58 Identities=10% Similarity=0.045 Sum_probs=45.0
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 21 EDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4679999999999998888887777777787777777777788888887775 355544
No 269
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=50.10 E-value=80 Score=28.43 Aligned_cols=69 Identities=17% Similarity=0.083 Sum_probs=48.8
Q ss_pred CCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChh
Q 048643 190 SKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLK 269 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~ 269 (506)
++..++.....-+.+...+.++|+ ++.....+ +.++++..+++..++|.. +||+..
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~~---~i~~~~~~-------~~ee~~~~i~~l~~~G~~--vVVG~~------------ 162 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFNL---RLDQRSYI-------TEEDARGQINELKANGTE--AVVGAG------------ 162 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHTC---CEEEEEES-------SHHHHHHHHHHHHHTTCC--EEEESH------------
T ss_pred CcEEEEeCchhhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCC--EEECCH------------
Confidence 455555555566778888999999 88888765 567888888888888743 233321
Q ss_pred HHHHHHHHhCCEE
Q 048643 270 PLCDVAKQFGIWV 282 (506)
Q Consensus 270 ~I~~ia~~~g~~l 282 (506)
-.+++|+++|+.-
T Consensus 163 ~~~~~A~~~Gl~~ 175 (225)
T 2pju_A 163 LITDLAEEAGMTG 175 (225)
T ss_dssp HHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCcE
Confidence 2378999999864
No 270
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=50.07 E-value=10 Score=35.80 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=40.8
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
+++.+|.+.+++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 13 KQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 3579999999999999888887666677777777766667777777777664
No 271
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=49.86 E-value=1.3e+02 Score=27.53 Aligned_cols=44 Identities=14% Similarity=0.076 Sum_probs=30.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 76 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 119 (271)
T 4ibo_A 76 DAEAVAFD-----VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPM 119 (271)
T ss_dssp CEEECCCC-----TTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCG
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 78888876 447888888887765544456678888886655544
No 272
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=49.44 E-value=34 Score=30.65 Aligned_cols=50 Identities=12% Similarity=0.069 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 233 PDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
..+=|.+++=.+-+|..|..|++..- +..|..-..+++.++|++||+.++
T Consensus 151 ~GhTEAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 151 GGHTEATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp CSHHHHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred CCcHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 34557777777778999988887765 466889999999999999999875
No 273
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=49.35 E-value=18 Score=35.17 Aligned_cols=58 Identities=16% Similarity=0.162 Sum_probs=42.0
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
+++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+-.-++.+++
T Consensus 40 ~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 40 QDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888887777777777777776667777777763333455543
No 274
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=49.26 E-value=16 Score=34.51 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=43.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEE
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVH 283 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lh 283 (506)
+++ +|.+.+++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. ++.++
T Consensus 16 ~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (291)
T 3a5f_A 16 NTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVI 74 (291)
T ss_dssp SSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 468 999999999998888887777777777777777777777888877664 35554
No 275
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=49.19 E-value=14 Score=35.97 Aligned_cols=57 Identities=18% Similarity=0.152 Sum_probs=42.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 579999999999998888887777777777777777777777777777654 355543
No 276
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=49.12 E-value=66 Score=29.16 Aligned_cols=64 Identities=8% Similarity=0.061 Sum_probs=38.7
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++ .......+....+|. ++..+++| --|.+.+++.+++..+.-..+-+++-++|....+.+
T Consensus 35 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (255)
T 4eso_A 35 VLLTG-RNESNIARIREEFGP---RVHALRSD-----IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPF 98 (255)
T ss_dssp EEEEE-SCHHHHHHHHHHHGG---GEEEEECC-----TTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCG
T ss_pred EEEEe-CCHHHHHHHHHHhCC---cceEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 44444 333455555555665 78888887 347777777776554332345567777776655544
No 277
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=47.89 E-value=11 Score=36.07 Aligned_cols=57 Identities=9% Similarity=0.093 Sum_probs=39.0
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 468888888888888777776666666666666666666667777766654 355544
No 278
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=47.87 E-value=14 Score=35.22 Aligned_cols=57 Identities=16% Similarity=0.178 Sum_probs=44.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh----CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF----GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~----g~~lhV 284 (506)
++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 579999999999999888887777777777777777777777888877664 467765
No 279
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=47.10 E-value=12 Score=35.85 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=46.8
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 25 KTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999999888887777888888888888888888888887765 356654
No 280
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=46.37 E-value=13 Score=35.62 Aligned_cols=58 Identities=9% Similarity=0.102 Sum_probs=42.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
+++.+|.+.|++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 26 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 26 GTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp TTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 3579999999999998888886666666677776666667777777777653 466654
No 281
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=45.73 E-value=1e+02 Score=28.16 Aligned_cols=45 Identities=11% Similarity=-0.044 Sum_probs=29.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+.
T Consensus 54 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~ 98 (264)
T 3tfo_A 54 TALAQVLD-----VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLA 98 (264)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 77788876 3477788877776544323455777888876655543
No 282
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=45.52 E-value=16 Score=34.43 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=42.0
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++++|.+.+++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 468999999999988888886666677777777766667777777777654 355543
No 283
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=45.47 E-value=18 Score=34.21 Aligned_cols=57 Identities=18% Similarity=0.262 Sum_probs=41.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++++|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 469999999999998888886666666777776666667777777777654 356543
No 284
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=45.33 E-value=1.4e+02 Score=26.87 Aligned_cols=67 Identities=15% Similarity=-0.030 Sum_probs=36.9
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++. ......+....+.-...++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 99 (257)
T 3imf_A 33 VVITGR-TKEKLEEAKLEIEQFPGQILTVQMD-----VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPA 99 (257)
T ss_dssp EEEEES-CHHHHHHHHHHHCCSTTCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred EEEEeC-CHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 444443 2334444444432212278888877 347778888777654432234567777776555444
No 285
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=45.08 E-value=42 Score=30.27 Aligned_cols=51 Identities=12% Similarity=-0.004 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
..-+=|..++-.+-+|..|..|++..- +..|..-..+++.++|++||+.++
T Consensus 161 R~GHTEaaVdLarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~i 211 (227)
T 1snn_A 161 RQGHTEMTVALAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYL 211 (227)
T ss_dssp CCSHHHHHHHHHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEE
T ss_pred CCCchHHHHHHHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEE
Confidence 334667777777778999998888776 455999999999999999999885
No 286
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=44.93 E-value=73 Score=28.43 Aligned_cols=64 Identities=19% Similarity=0.150 Sum_probs=35.5
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++. .-....+....++- ++..+.+|- -|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 30 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 93 (235)
T 3l6e_A 30 VSMMGR-RYQRLQQQELLLGN---AVIGIVADL-----AHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPV 93 (235)
T ss_dssp EEEEES-CHHHHHHHHHHHGG---GEEEEECCT-----TSHHHHHHHHHHHHHHHCSCSEEEEECCCC-----
T ss_pred EEEEEC-CHHHHHHHHHHhcC---CceEEECCC-----CCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCh
Confidence 444443 23345555555554 678888763 47788887777654432345567778876655544
No 287
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=44.76 E-value=1.2e+02 Score=27.36 Aligned_cols=45 Identities=20% Similarity=0.096 Sum_probs=30.0
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
.++..+++|- -|.+.+++.+++..+....+-+||-++|....+.+
T Consensus 73 ~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~ 117 (266)
T 3o38_A 73 GRVEAVVCDV-----TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPV 117 (266)
T ss_dssp SCEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred CceEEEEeCC-----CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCc
Confidence 4788888873 47788888777654433345577778876655554
No 288
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=44.17 E-value=1.2e+02 Score=27.36 Aligned_cols=43 Identities=9% Similarity=-0.007 Sum_probs=30.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+. ..+-++|-++|....+.+
T Consensus 57 ~~~~~~~D-----v~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~ 99 (252)
T 3h7a_A 57 RIVARSLD-----ARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPI 99 (252)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCG
T ss_pred eEEEEECc-----CCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCc
Confidence 78888887 34788888888776555 456677888886665544
No 289
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=44.01 E-value=1.7e+02 Score=26.23 Aligned_cols=64 Identities=13% Similarity=-0.044 Sum_probs=36.8
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++.. -....+.+..+|. ++..+.+| --|.+.+++.+++..+.-..+-+||-++|....+.+
T Consensus 33 V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 96 (253)
T 1hxh_A 33 VAFSDIN-EAAGQQLAAELGE---RSMFVRHD-----VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM 96 (253)
T ss_dssp EEEECSC-HHHHHHHHHHHCT---TEEEECCC-----TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCT
T ss_pred EEEEeCC-HHHHHHHHHHcCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 4444432 2334444444555 78888876 347888888777654332234567777776555444
No 290
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=43.27 E-value=97 Score=27.82 Aligned_cols=58 Identities=14% Similarity=0.071 Sum_probs=35.3
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
......+....++- ++..+++| --|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 42 ~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 99 (248)
T 3op4_A 42 SESGAQAISDYLGD---NGKGMALN-----VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLL 99 (248)
T ss_dssp SHHHHHHHHHHHGG---GEEEEECC-----TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred CHHHHHHHHHHhcc---cceEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 33345555555555 66777776 347788888777654432234567777776655544
No 291
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.09 E-value=60 Score=28.48 Aligned_cols=68 Identities=13% Similarity=0.220 Sum_probs=43.6
Q ss_pred CeEEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhH
Q 048643 191 KLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKP 270 (506)
Q Consensus 191 ~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~ 270 (506)
+..++.....-..+...+.++|+ ++.....+ +.+++++.+++..++|.. +||... -
T Consensus 96 kIavvg~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~l~~~G~~--vvVG~~------------~ 151 (196)
T 2q5c_A 96 ELALIAYKHSIVDKHEIEAMLGV---KIKEFLFS-------SEDEITTLISKVKTENIK--IVVSGK------------T 151 (196)
T ss_dssp EEEEEEESSCSSCHHHHHHHHTC---EEEEEEEC-------SGGGHHHHHHHHHHTTCC--EEEECH------------H
T ss_pred cEEEEeCcchhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCe--EEECCH------------H
Confidence 44444444555677888899999 88887765 334556677777777733 233321 1
Q ss_pred HHHHHHHhCCEE
Q 048643 271 LCDVAKQFGIWV 282 (506)
Q Consensus 271 I~~ia~~~g~~l 282 (506)
.+++|+++|+.-
T Consensus 152 ~~~~A~~~Gl~~ 163 (196)
T 2q5c_A 152 VTDEAIKQGLYG 163 (196)
T ss_dssp HHHHHHHTTCEE
T ss_pred HHHHHHHcCCcE
Confidence 378899999764
No 292
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=42.75 E-value=15 Score=34.66 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=40.6
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
++.+|.+.+++.++...++|-.-++++.|.|...+=+.+.-.++.+.+.+.
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA 63 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 469999999999998888887666677777777777777778888877765
No 293
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=42.72 E-value=11 Score=35.85 Aligned_cols=58 Identities=12% Similarity=0.032 Sum_probs=44.8
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
.++++|.+.+++.++...++|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 18 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 18 AEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999999888887777777777777777777778888877764 355544
No 294
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=42.48 E-value=1.2e+02 Score=27.69 Aligned_cols=60 Identities=27% Similarity=0.177 Sum_probs=36.2
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA 261 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~ 261 (506)
+++++. ......+.+..++- ++..+++|- -|.+.+++.+++..+....+-++|-++|...
T Consensus 55 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 114 (272)
T 4dyv_A 55 VALAGR-RLDALQETAAEIGD---DALCVPTDV-----TDPDSVRALFTATVEKFGRVDVLFNNAGTGA 114 (272)
T ss_dssp EEEEES-CHHHHHHHHHHHTS---CCEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred EEEEEC-CHHHHHHHHHHhCC---CeEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 444443 33455566666665 788888773 4777888777765433224556777777543
No 295
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=40.96 E-value=1.1e+02 Score=28.00 Aligned_cols=45 Identities=13% Similarity=-0.002 Sum_probs=29.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+| --|.+.+++.+++..+.-..+-+||-++|....+.+.
T Consensus 74 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 118 (279)
T 3sju_A 74 DVDGSSCD-----VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETA 118 (279)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChh
Confidence 78888877 3478888888776544322455777788876655553
No 296
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=40.47 E-value=1.7e+02 Score=26.37 Aligned_cols=44 Identities=9% Similarity=-0.041 Sum_probs=29.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 55 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (258)
T 3oid_A 55 KVLVVKAN-----VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPV 98 (258)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 78888887 347888888887654433345577778876555544
No 297
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=40.04 E-value=1.3e+02 Score=23.32 Aligned_cols=73 Identities=8% Similarity=0.139 Sum_probs=45.7
Q ss_pred CCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 190 SKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 190 ~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
.+.+||....+.+| +.+...-+|+ ....+.++.. -|.+.+++.+.+.......|.+++ +....|..|+
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L~~~~i---~~~~~dvd~~----~~~~~~~~~l~~~~g~~tvP~vfi---~g~~igG~d~ 86 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELFSSLGV---ECNVLELDQV----DDGARVQEVLSEITNQKTVPNIFV---NKVHVGGCDQ 86 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTC---CCEEEETTTS----TTHHHHHHHHHHHHSCCSSCEEEE---TTEEEESHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCC---CcEEEEecCC----CChHHHHHHHHHHhCCCccCEEEE---CCEEEeCHHH
Confidence 67888888777765 3455566788 7888888742 256677777765544445576544 3345566676
Q ss_pred hhHHH
Q 048643 268 LKPLC 272 (506)
Q Consensus 268 l~~I~ 272 (506)
+.++.
T Consensus 87 l~~l~ 91 (114)
T 3h8q_A 87 TFQAY 91 (114)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 298
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=39.51 E-value=1.8e+02 Score=26.90 Aligned_cols=69 Identities=16% Similarity=0.120 Sum_probs=38.7
Q ss_pred EEEeCCCCchHHHHHHHHh-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 193 VVYGSDQTHCALQKAAQIV-GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
+++++.. -....+.+..+ ..+..++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+++
T Consensus 68 V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~ 137 (293)
T 3rih_A 68 VAVAARS-PRELSSVTAELGELGAGNVIGVRLD-----VSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDT 137 (293)
T ss_dssp EEEEESS-GGGGHHHHHHHTTSSSSCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTT
T ss_pred EEEEECC-HHHHHHHHHHHHhhCCCcEEEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 4444433 22334444333 2233478888887 34788888877765443223456777887766665543
No 299
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=39.33 E-value=20 Score=34.22 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=44.0
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIV 86 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 469999999999998888887777777787877777777778888877664 355543
No 300
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=39.11 E-value=1.3e+02 Score=27.90 Aligned_cols=45 Identities=4% Similarity=-0.065 Sum_probs=29.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+|- -|.+.+++.+++..+....+-+||-++|....+.+.
T Consensus 81 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 125 (301)
T 3tjr_A 81 DAHGVVCDV-----RHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLA 125 (301)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGG
T ss_pred ceEEEEccC-----CCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcc
Confidence 788888873 477888887776544322355778888876665543
No 301
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=38.80 E-value=2.1e+02 Score=25.48 Aligned_cols=60 Identities=12% Similarity=0.027 Sum_probs=36.6
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA 261 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~ 261 (506)
+++++ -......+.+..++. ++..+.+|- -|.+.+++.+++..+....+-+|+-++|...
T Consensus 36 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 95 (261)
T 3n74_A 36 VVIVD-RDKAGAERVAGEIGD---AALAVAADI-----SKEADVDAAVEAALSKFGKVDILVNNAGIGH 95 (261)
T ss_dssp EEEEE-SCHHHHHHHHHHHCT---TEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred EEEEc-CCHHHHHHHHHHhCC---ceEEEEecC-----CCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 44444 333455566666666 888888873 4677777777765443223556777777543
No 302
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=38.61 E-value=57 Score=29.14 Aligned_cols=101 Identities=13% Similarity=0.086 Sum_probs=59.2
Q ss_pred CeEEEeC-CCCch----HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 191 KLVVYGS-DQTHC----ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 191 ~~~v~~s-~~~H~----s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+.++.+. ...|- -+....+..|. +|+.+.. .+.++.+.+++.+.. |-+|.++.....+...
T Consensus 94 ~vll~~v~gd~HdiG~~iv~~~l~~~G~---~Vi~LG~------~vp~e~iv~~~~~~~-----~d~v~l~~S~l~~~~~ 159 (215)
T 3ezx_A 94 LAITFVAEGDIHDIGHRLVTTMLGANGF---QIVDLGV------DVLNENVVEEAAKHK-----GEKVLLVGSALMTTSM 159 (215)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHHTSC---EEEECCS------SCCHHHHHHHHHHTT-----TSCEEEEEECSSHHHH
T ss_pred eEEEEeCCCChhHHHHHHHHHHHHHCCC---eEEEcCC------CCCHHHHHHHHHHcC-----CCEEEEEchhcccCcH
Confidence 3344333 45673 34445566788 7877654 457888877776643 3356663333444566
Q ss_pred cChhHHHHHHHHhCC----EEEeecccccccccCccchhhhcCCCCCCeeEEc
Q 048643 266 DPLKPLCDVAKQFGI----WVHVDAAYAGSACICPEFQHFIDGVEGADSFSLN 314 (506)
Q Consensus 266 dpl~~I~~ia~~~g~----~lhVDaA~gg~~~~~~~~~~~~~gi~~aDsi~~~ 314 (506)
+.+.++.+.+++.+. .+.| |+..+.+++...+ +||.++-|
T Consensus 160 ~~~~~~i~~l~~~~~~~~v~v~v-----GG~~~~~~~a~~i----Gad~~~~d 203 (215)
T 3ezx_A 160 LGQKDLMDRLNEEKLRDSVKCMF-----GGAPVSDKWIEEI----GADATAEN 203 (215)
T ss_dssp THHHHHHHHHHHTTCGGGSEEEE-----ESSSCCHHHHHHH----TCCBCCSS
T ss_pred HHHHHHHHHHHHcCCCCCCEEEE-----ECCCCCHHHHHHh----CCeEEECC
Confidence 778999999998864 5555 3344444443322 56665533
No 303
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=37.91 E-value=1.2e+02 Score=27.81 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=30.5
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC-CCCcc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT-AITAV 265 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt-~tG~i 265 (506)
-.|. ++..+++| --|.+++++.+++..++-.++-++|-++|.. ..+.+
T Consensus 53 ~~g~---~~~~~~~D-----vt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~ 101 (254)
T 4fn4_A 53 GMGK---EVLGVKAD-----VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPV 101 (254)
T ss_dssp HTTC---CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCG
T ss_pred hcCC---cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCh
Confidence 3455 88888887 4478888888877654433455677777743 33434
No 304
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=37.77 E-value=2e+02 Score=26.37 Aligned_cols=62 Identities=11% Similarity=-0.132 Sum_probs=34.7
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
++++.. ......+.+..+.-...++..+++| --|.+.+++.+++..+....+-++|-++|..
T Consensus 55 V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 55 VGALGR-TRTEVEEVADEIVGAGGQAIALEAD-----VSDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp EEEEES-SHHHHHHHHHHHTTTTCCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEeC-CHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 444443 3334444444432212278888877 3477888888776544323455677777754
No 305
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=37.54 E-value=18 Score=34.27 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=38.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
++++|.+.+++.++...++|-.-++++.|.|...+=+.+.-.++.+.+.+.
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~ 65 (297)
T 2rfg_A 15 NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQ 65 (297)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHH
Confidence 468999999998888877776666666777777666667777777776653
No 306
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=37.08 E-value=1.3e+02 Score=27.42 Aligned_cols=56 Identities=14% Similarity=-0.071 Sum_probs=34.6
Q ss_pred hHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 202 CALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 202 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
....+....++- ++..+.+| --|.+.+++.+++..+....+-+|+-++|....+.+
T Consensus 40 ~~~~~~~~~~~~---~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 95 (281)
T 3m1a_A 40 EALDDLVAAYPD---RAEAISLD-----VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAF 95 (281)
T ss_dssp GGGHHHHHHCTT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCT
T ss_pred HHHHHHHHhccC---CceEEEee-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCh
Confidence 344555555555 78888876 347788888777654332235567777776555544
No 307
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=36.80 E-value=15 Score=37.09 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=27.9
Q ss_pred cCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 258 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 258 gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
..+-.|..++++++++-||++|+.+++|.++
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3567899999999999999999999999864
No 308
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=36.27 E-value=2.3e+02 Score=25.34 Aligned_cols=44 Identities=7% Similarity=-0.107 Sum_probs=27.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 56 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~ 99 (260)
T 1x1t_A 56 KVLYDGAD-----LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALI 99 (260)
T ss_dssp CEEEECCC-----TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence 78888876 347788888777643332234467777775554443
No 309
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=35.80 E-value=11 Score=35.63 Aligned_cols=55 Identities=7% Similarity=-0.093 Sum_probs=38.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEe
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 284 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhV 284 (506)
++.+|.+.+++.++...++ -.-++++.|.|...+=+.+.-.++.+.+.+ ++.+++
T Consensus 13 dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvia 67 (283)
T 2pcq_A 13 EGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLV 67 (283)
T ss_dssp TCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEE
T ss_pred CCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEE
Confidence 5799999999999877665 445556666666666666666777777666 555543
No 310
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=35.36 E-value=2e+02 Score=25.59 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=28.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+.
T Consensus 57 ~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 101 (247)
T 2jah_A 57 KVHVLELD-----VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVE 101 (247)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCST
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchh
Confidence 78888876 3477888887776543322344677777766555443
No 311
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=34.93 E-value=1.5e+02 Score=26.99 Aligned_cols=44 Identities=5% Similarity=0.009 Sum_probs=28.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+|- -|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 78 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 121 (277)
T 4fc7_A 78 RCLPLSMDV-----RAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPA 121 (277)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCc
Confidence 788888873 47788888777654432245567777775554444
No 312
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=34.56 E-value=1.1e+02 Score=28.27 Aligned_cols=62 Identities=16% Similarity=0.084 Sum_probs=41.9
Q ss_pred cCHHHHHHHHHHHHhcCCccEEEEEec--c-CCCCCcccChhHHHHHHHHhCCEEEeeccccccc
Q 048643 231 LSPDSLLTQINLDVEAGLVPLFLCATI--G-TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 292 (506)
Q Consensus 231 ~d~~~L~~~i~~~~~~g~~p~~Vv~t~--g-tt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~ 292 (506)
.+++.+..+++.....|..-+.++--. . +++.=..-+|..|..+.+.+++.+++|..|+++.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 489999999987777775444444421 1 1222222357888888888899999999998664
No 313
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=34.49 E-value=2.7e+02 Score=25.40 Aligned_cols=62 Identities=11% Similarity=-0.124 Sum_probs=33.4
Q ss_pred EEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 194 VYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 194 v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
|++....-....+.+..+.-...++..+.+| --|.+.+++.+++..+.-..+-++|-++|..
T Consensus 35 V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 35 VVVTARNGNALAELTDEIAGGGGEAAALAGD-----VGDEALHEALVELAVRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp EEECCSCHHHHHHHHHHHTTTTCCEEECCCC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEECCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 4433333334444444442222378888876 3467777777766543322345677777743
No 314
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=34.31 E-value=1.2e+02 Score=27.30 Aligned_cols=53 Identities=11% Similarity=-0.047 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 204 LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 204 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
..+.+..++. ++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.
T Consensus 44 ~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 96 (257)
T 3tpc_A 44 GEEPAAELGA---AVRFRNAD-----VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEK 96 (257)
T ss_dssp --------------CEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHhCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence 3444444454 67888876 34778888877765443223556777777654443
No 315
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=34.02 E-value=65 Score=29.12 Aligned_cols=50 Identities=16% Similarity=0.128 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeccCCC----------CCcccChhHHHHHHHHhCCEEE
Q 048643 234 DSLLTQINLDVEAGLVPLFLCATIGTTA----------ITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 234 ~~L~~~i~~~~~~g~~p~~Vv~t~gtt~----------tG~idpl~~I~~ia~~~g~~lh 283 (506)
-+=|.+++-.+-+|..|..|++..-.-. .|..-.++++.++|++||+.++
T Consensus 152 GHTEAaVDLarLAGl~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~ii 211 (233)
T 1k4i_A 152 GHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVC 211 (233)
T ss_dssp SHHHHHHHHHHHTTCCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHcCCCceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3557777777778999988887665321 5889999999999999999885
No 316
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=33.93 E-value=2.3e+02 Score=25.19 Aligned_cols=65 Identities=9% Similarity=-0.022 Sum_probs=35.9
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++........+.++..|. ++..+++|- -|.+.+++.+++..+.-..+-+||-++|....+.+
T Consensus 34 V~~~~r~~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (249)
T 2ew8_A 34 IAIADLVPAPEAEAAIRNLGR---RVLTVKCDV-----SQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPF 98 (249)
T ss_dssp EEEEESSCCHHHHHHHHHTTC---CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred EEEEcCCchhHHHHHHHhcCC---cEEEEEeec-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 444444331333333333454 788888763 47778887776644332234567777776555443
No 317
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=33.81 E-value=19 Score=34.02 Aligned_cols=51 Identities=14% Similarity=0.251 Sum_probs=39.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh
Q 048643 228 SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF 278 (506)
Q Consensus 228 ~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~ 278 (506)
++.+|.+.+++.++...+.|-.-++++.|.|...+=..+.-.++.+.+.+.
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 65 (292)
T 2vc6_A 15 DDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKT 65 (292)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 569999999999998888886666666777777766667777777777654
No 318
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.76 E-value=2.6e+02 Score=25.02 Aligned_cols=45 Identities=16% Similarity=-0.026 Sum_probs=28.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC-CCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT-AITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt-~tG~id 266 (506)
++..+.+| --|.+.+++.+++..+.-..+-++|-++|.. ..+.+.
T Consensus 59 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~ 104 (259)
T 3edm_A 59 SALAIKAD-----LTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIA 104 (259)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTT
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChh
Confidence 67888877 3477888888776544323455667677644 444443
No 319
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=33.60 E-value=28 Score=32.83 Aligned_cols=57 Identities=11% Similarity=0.153 Sum_probs=43.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHh---CCEEEe
Q 048643 227 SSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 284 (506)
Q Consensus 227 ~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~---g~~lhV 284 (506)
++ .+|.+.+++.++...+.|-.-+++..|.|...+=..+.-.++.+.+.+. ++.+++
T Consensus 17 ~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 76 (292)
T 3daq_A 17 NN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA 76 (292)
T ss_dssp TT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 36 8999999999988888887777777777777777777777788877664 355554
No 320
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=33.59 E-value=2.4e+02 Score=25.55 Aligned_cols=44 Identities=14% Similarity=-0.105 Sum_probs=28.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+.-..+-+||-++|....+.+
T Consensus 72 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~ 115 (277)
T 2rhc_B 72 EADGRTCD-----VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGAT 115 (277)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCG
T ss_pred ceEEEECC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 77888876 347888888877654433334567777776554443
No 321
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=33.53 E-value=2.4e+02 Score=25.58 Aligned_cols=49 Identities=10% Similarity=-0.054 Sum_probs=31.0
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
..|. ++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+.
T Consensus 74 ~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~ 122 (270)
T 3ftp_A 74 QAGL---EGRGAVLN-----VNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAM 122 (270)
T ss_dssp HHTC---CCEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred hcCC---cEEEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 3465 77778776 3477888887776544322355677788766655543
No 322
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=33.16 E-value=2.1e+02 Score=25.84 Aligned_cols=44 Identities=7% Similarity=-0.119 Sum_probs=27.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+|- -|.+.+++++++..+.-..+-+||-++|....+.+
T Consensus 72 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 115 (267)
T 1vl8_A 72 ETMAFRCDV-----SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPA 115 (267)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence 788888763 47788888777644322234467777776554443
No 323
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=32.77 E-value=1.7e+02 Score=26.65 Aligned_cols=44 Identities=16% Similarity=-0.040 Sum_probs=29.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 79 ~~~~~~~D-----~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 122 (269)
T 4dmm_A 79 EAFAVKAD-----VSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLL 122 (269)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888887 347788888777654432245567778876665544
No 324
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.73 E-value=1.8e+02 Score=26.35 Aligned_cols=64 Identities=11% Similarity=-0.041 Sum_probs=36.1
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++. ......+.+..++. ++..+++|- -|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 96 (263)
T 2a4k_A 33 LVAVDR-EERLLAEAVAALEA---EAIAVVADV-----SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS 96 (263)
T ss_dssp EEEEES-CHHHHHHHHHTCCS---SEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC-
T ss_pred EEEEeC-CHHHHHHHHHHhcC---ceEEEEcCC-----CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 444443 22344444444443 678888763 47888888877654332234567777776555443
No 325
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=32.24 E-value=2.1e+02 Score=25.82 Aligned_cols=45 Identities=9% Similarity=-0.062 Sum_probs=29.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+.
T Consensus 60 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 104 (265)
T 3lf2_A 60 RLFASVCD-----VLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFA 104 (265)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTT
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 58888877 3477787777766544322355677788876665553
No 326
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.03 E-value=2.4e+02 Score=25.37 Aligned_cols=46 Identities=13% Similarity=-0.015 Sum_probs=29.4
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 216 KNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 216 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
.++..+.+|- -|.+.+++.+++..++-..+-++|-++|....+.+.
T Consensus 60 ~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 105 (262)
T 3pk0_A 60 GKVIGVQTDV-----SDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLA 105 (262)
T ss_dssp SCEEEEECCT-----TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTT
T ss_pred CcEEEEEcCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChh
Confidence 3788888773 477788877766544322355677777766555443
No 327
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=31.59 E-value=68 Score=25.77 Aligned_cols=47 Identities=17% Similarity=0.130 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
..+...+.+++..+.|-+ .|+++.|.. + +++.++|+++|+.+. ..|.
T Consensus 67 p~~~v~~~v~e~~~~g~k--~v~~~~G~~-----~--~e~~~~a~~~Girvv-~nC~ 113 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLKPK--RVIFNPGTE-----N--EELEEILSENGIEPV-IGCT 113 (122)
T ss_dssp CHHHHGGGHHHHHHHCCS--EEEECTTCC-----C--HHHHHHHHHTTCEEE-ESCH
T ss_pred CHHHHHHHHHHHHhcCCC--EEEECCCCC-----h--HHHHHHHHHcCCeEE-CCcC
Confidence 456666667776666644 366776642 2 799999999999886 4554
No 328
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=31.52 E-value=2.5e+02 Score=25.40 Aligned_cols=44 Identities=14% Similarity=0.031 Sum_probs=29.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+|- -|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 78 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~ 121 (267)
T 3u5t_A 78 KALTAQADV-----SDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTI 121 (267)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCG
T ss_pred eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 788888873 47788888777654433345577778876655554
No 329
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=31.47 E-value=2e+02 Score=28.15 Aligned_cols=81 Identities=15% Similarity=0.048 Sum_probs=52.8
Q ss_pred chHHHHHHHHhCCCCCCeEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEeccCCCC-C---cccChhHHHHHH
Q 048643 201 HCALQKAAQIVGIDLKNFRAIKTTKSSSYG-LSPDSLLTQINLDVEAGLVPLFLCATIGTTAI-T---AVDPLKPLCDVA 275 (506)
Q Consensus 201 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G---~idpl~~I~~ia 275 (506)
+..+.+.+.-.|. .+.+.. |. .+++.++.+++.....|...+ +++-.|++.+ . ..-++..|..+.
T Consensus 238 n~~LL~~~a~~gk----PVilk~-----G~~~t~~e~~~Ave~i~~~Gn~~i-~L~~rG~s~yp~~~~~~ldl~~i~~lk 307 (385)
T 3nvt_A 238 NFELLKAAGRVDK----PILLKR-----GLSATIEEFIGAAEYIMSQGNGKI-ILCERGIRTYEKATRNTLDISAVPILK 307 (385)
T ss_dssp CHHHHHHHHTSSS----CEEEEC-----CTTCCHHHHHHHHHHHHTTTCCCE-EEEECCBCCSCCSSSSBCCTTHHHHHH
T ss_pred CHHHHHHHHccCC----cEEEec-----CCCCCHHHHHHHHHHHHHcCCCeE-EEEECCCCCCCCCCccccCHHHHHHHH
Confidence 4444554443333 455553 34 799999999988777776554 4444443322 1 123788888888
Q ss_pred HHhCCEEEeecccccc
Q 048643 276 KQFGIWVHVDAAYAGS 291 (506)
Q Consensus 276 ~~~g~~lhVDaA~gg~ 291 (506)
+..++.+++|.+|+++
T Consensus 308 ~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 308 KETHLPVMVDVTHSTG 323 (385)
T ss_dssp HHBSSCEEEEHHHHHC
T ss_pred HhcCCCEEEcCCCCCC
Confidence 8899999999999864
No 330
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=31.37 E-value=21 Score=35.89 Aligned_cols=30 Identities=10% Similarity=0.058 Sum_probs=26.6
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
....|..++++++++-||++|+.+++|.++
T Consensus 58 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 58 QSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 456789999999999999999999999865
No 331
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=31.20 E-value=2.8e+02 Score=24.89 Aligned_cols=62 Identities=5% Similarity=-0.029 Sum_probs=32.7
Q ss_pred EEEeCCCCchHHHHHHHHh-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 193 VVYGSDQTHCALQKAAQIV-GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
++++... -....+..+.+ ..+..++..+++| --|.+++++.+++..++-..+-++|-++|..
T Consensus 35 Vvi~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 35 LVFTYRK-ERSRKELEKLLEQLNQPEAHLYQID-----VQSDEEVINGFEQIGKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp EEEEESS-GGGHHHHHHHHGGGTCSSCEEEECC-----TTCHHHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred EEEEECC-HHHHHHHHHHHHhcCCCcEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEeccccc
Confidence 4454433 23344443332 2233377888877 3477788877776544322333566666643
No 332
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=31.13 E-value=2.5e+02 Score=25.12 Aligned_cols=44 Identities=9% Similarity=0.026 Sum_probs=27.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++|- -|.+.+++.+++..+.-..+-+||-++|....+.+
T Consensus 58 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 101 (263)
T 3ai3_A 58 RVLEVAVDV-----ATPEGVDAVVESVRSSFGGADILVNNAGTGSNETI 101 (263)
T ss_dssp CEEEEECCT-----TSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCT
T ss_pred ceEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 788888763 47788888776543322234467777776554444
No 333
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=31.05 E-value=2.8e+02 Score=24.61 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=28.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+.-..+-+||-++|....+.+
T Consensus 52 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 95 (256)
T 1geg_A 52 HAVAVKVD-----VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI 95 (256)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCG
T ss_pred cEEEEEec-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 78888876 347888888887654433345567777776554443
No 334
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=30.95 E-value=2.7e+02 Score=25.39 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=28.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..+++| --|.+.+++++++..+....+-+|+-++|....+.
T Consensus 77 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~ 119 (302)
T 1w6u_A 77 KVHAIQCD-----VRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP 119 (302)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSC
T ss_pred ceEEEEeC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence 78888876 34788888888775443334556777777554443
No 335
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=30.88 E-value=1.7e+02 Score=26.26 Aligned_cols=64 Identities=13% Similarity=-0.092 Sum_probs=35.1
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+++++.. .....+.+..+|. ++..+++|- -|.+.+++.+++..+.-..+-+||-++|....+.+
T Consensus 32 V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 95 (254)
T 1hdc_A 32 VVLADVL-DEEGAATARELGD---AARYQHLDV-----TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL 95 (254)
T ss_dssp EEEEESC-HHHHHHHHHTTGG---GEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCG
T ss_pred EEEEeCC-HHHHHHHHHHhCC---ceeEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 4444432 2334444444444 677787763 36778887776544332234567777776554433
No 336
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=30.71 E-value=2.7e+02 Score=25.51 Aligned_cols=44 Identities=9% Similarity=-0.041 Sum_probs=28.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++++++..+.-..+-+||-++|....+.+
T Consensus 84 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 127 (291)
T 3cxt_A 84 NAHGYVCD-----VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPM 127 (291)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCG
T ss_pred eEEEEEec-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCcCCCCCc
Confidence 67778776 347888888887654433345567777776555443
No 337
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=30.61 E-value=2.4e+02 Score=25.67 Aligned_cols=44 Identities=11% Similarity=-0.056 Sum_probs=29.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 94 ~~~~~~~D-----l~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 137 (285)
T 2c07_A 94 ESSGYAGD-----VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF 137 (285)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCT
T ss_pred ceeEEECC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCch
Confidence 78888876 347888888887654433345567777776655544
No 338
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.07 E-value=1.8e+02 Score=26.38 Aligned_cols=49 Identities=12% Similarity=0.019 Sum_probs=32.1
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
..|. ++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+.
T Consensus 65 ~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 113 (270)
T 3is3_A 65 ALGS---DAIAIKAD-----IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLK 113 (270)
T ss_dssp HTTC---CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGG
T ss_pred hcCC---cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 3455 78888887 3477888888776544322455677777776666553
No 339
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=29.99 E-value=2.8e+02 Score=25.09 Aligned_cols=44 Identities=18% Similarity=0.069 Sum_probs=29.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 82 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (271)
T 3v2g_A 82 RAVAIRAD-----NRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPL 125 (271)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 78888887 347888888887654432245567777776655544
No 340
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=29.77 E-value=1.7e+02 Score=25.70 Aligned_cols=48 Identities=10% Similarity=-0.076 Sum_probs=30.4
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
.|. ++..+++| --|.+.+++.+++..+....+-+++-++|....+.+.
T Consensus 50 ~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~ 97 (235)
T 3l77_A 50 QGV---EVFYHHLD-----VSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLE 97 (235)
T ss_dssp HCC---CEEEEECC-----TTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTT
T ss_pred cCC---eEEEEEec-----cCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcc
Confidence 455 88888887 3477788777765433322355777888876665553
No 341
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.44 E-value=2.2e+02 Score=26.51 Aligned_cols=46 Identities=13% Similarity=-0.014 Sum_probs=30.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+.+
T Consensus 108 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~ 153 (317)
T 3oec_A 108 RIIARQAD-----VRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVS 153 (317)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTT
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 78888887 34778888877765443234557777888766665543
No 342
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=29.33 E-value=3.1e+02 Score=24.60 Aligned_cols=44 Identities=5% Similarity=-0.044 Sum_probs=28.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| -.|.+.+++.+++..+....+-+||-++|....+.+
T Consensus 81 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~ 124 (272)
T 1yb1_A 81 KVHTFVVD-----CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDL 124 (272)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCC
T ss_pred eEEEEEee-----CCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcch
Confidence 78888876 347888888887654433345567777776555444
No 343
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=29.27 E-value=2.4e+02 Score=25.57 Aligned_cols=44 Identities=11% Similarity=-0.126 Sum_probs=29.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 78 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 121 (280)
T 3pgx_A 78 KALTRVLD-----VRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRV 121 (280)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCG
T ss_pred eEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888876 347788888777654432245567778877665544
No 344
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=29.22 E-value=2.2e+02 Score=25.99 Aligned_cols=59 Identities=14% Similarity=-0.135 Sum_probs=35.6
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
+++++. ......+....++- ++..+.+| --|.+.+++.+++..+....+-++|-++|..
T Consensus 32 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 90 (281)
T 3zv4_A 32 VAVLDK-SAERLRELEVAHGG---NAVGVVGD-----VRSLQDQKRAAERCLAAFGKIDTLIPNAGIW 90 (281)
T ss_dssp EEEEES-CHHHHHHHHHHTBT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred EEEEeC-CHHHHHHHHHHcCC---cEEEEEcC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 444443 33345555555665 78888887 3477888887776544323455677777653
No 345
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=29.16 E-value=2.3e+02 Score=25.58 Aligned_cols=47 Identities=17% Similarity=0.087 Sum_probs=27.2
Q ss_pred hCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 211 VGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 211 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
.|. ++..+.+|- -|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 68 ~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 114 (266)
T 4egf_A 68 FGT---DVHTVAIDL-----AEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPV 114 (266)
T ss_dssp HCC---CEEEEECCT-----TSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCG
T ss_pred cCC---cEEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence 455 788888874 34555555555443322234467777776655544
No 346
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=29.01 E-value=1.4e+02 Score=22.09 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=38.5
Q ss_pred CCeEEEeCCCCchHH-----HH---HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHh--cCCccEEEEEeccC
Q 048643 190 SKLVVYGSDQTHCAL-----QK---AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVE--AGLVPLFLCATIGT 259 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~-----~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~--~g~~p~~Vv~t~gt 259 (506)
++.+||.+..++++- .+ ...-.|+ .+..+.++. |. .+++.+.+... ....|.+++ .|
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i---~~~~~di~~------~~-~~~~~l~~~~g~~~~~vP~ifi--~g- 68 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRI---QYQLVDISQ------DN-ALRDEMRTLAGNPKATPPQIVN--GN- 68 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTC---CCEEEETTS------CH-HHHHHHHHHTTCTTCCSCEEEE--TT-
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHHCCC---ceEEEECCC------CH-HHHHHHHHHhCCCCCCCCEEEE--CC-
Confidence 467889888888772 33 3345577 788888763 33 34444544432 114565433 22
Q ss_pred CCCCcccChhHH
Q 048643 260 TAITAVDPLKPL 271 (506)
Q Consensus 260 t~tG~idpl~~I 271 (506)
...|..|++.++
T Consensus 69 ~~igG~d~l~~l 80 (93)
T 1t1v_A 69 HYCGDYELFVEA 80 (93)
T ss_dssp EEEEEHHHHHHH
T ss_pred EEEeCHHHHHHH
Confidence 345666665554
No 347
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=28.79 E-value=1.6e+02 Score=26.98 Aligned_cols=44 Identities=11% Similarity=0.029 Sum_probs=28.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 82 ~~~~~~~D-----l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (276)
T 3r1i_A 82 KALPIRCD-----VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM 125 (276)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred eEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 77888876 347788888777654432235567777876665544
No 348
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=28.76 E-value=1.5e+02 Score=20.71 Aligned_cols=53 Identities=9% Similarity=0.191 Sum_probs=30.1
Q ss_pred CeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE
Q 048643 191 KLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFL 253 (506)
Q Consensus 191 ~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~V 253 (506)
+.++|....+.+| +...+...|+ .+..++++.+ . .+.+.+.+....+..|.++
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i---~~~~~~i~~~------~-~~~~~~~~~~~~~~vP~l~ 56 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGV---SFQELPIDGN------A-AKREEMIKRSGRTTVPQIF 56 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTC---CCEEEECTTC------S-HHHHHHHHHHSSCCSCEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHCCC---CcEEEECCCC------H-HHHHHHHHHhCCCCcCEEE
Confidence 4567776666654 3345566788 8888888642 1 2233333333345678654
No 349
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=28.67 E-value=3.1e+02 Score=24.38 Aligned_cols=49 Identities=22% Similarity=-0.012 Sum_probs=32.9
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
..|. ++..+++| --|.+.+++.+++..+....+-++|-++|....+.+.
T Consensus 70 ~~~~---~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~ 118 (267)
T 3gdg_A 70 TYGI---KAKAYKCQ-----VDSYESCEKLVKDVVADFGQIDAFIANAGATADSGIL 118 (267)
T ss_dssp HHCC---CEECCBCC-----TTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTT
T ss_pred hcCC---ceeEEecC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcc
Confidence 4466 88888887 3478888888877654433455777788766655443
No 350
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=28.64 E-value=2e+02 Score=26.10 Aligned_cols=44 Identities=20% Similarity=0.005 Sum_probs=29.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 74 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 117 (277)
T 3tsc_A 74 RIVAAVVD-----TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAW 117 (277)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 78888877 347888888877654432235567777876665544
No 351
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=28.62 E-value=1.5e+02 Score=23.72 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=39.7
Q ss_pred CCeEEEeCCCCchHHH---HHHHHhC---CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 190 SKLVVYGSDQTHCALQ---KAAQIVG---IDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~---ka~~~~G---~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
.+.++|....+.+|.. +.+...| + .+..++++.+. +-..+++.+.+.......|.++ .-| ...|
T Consensus 37 ~~Vvvy~~~~Cp~C~~a~k~~L~~~~~~~i---~~~~vdvd~~~----~~~~~~~~L~~~~g~~tVP~vf--i~g-~~ig 106 (129)
T 3ctg_A 37 KEVFVAAKTYCPYCKATLSTLFQELNVPKS---KALVLELDEMS----NGSEIQDALEEISGQKTVPNVY--ING-KHIG 106 (129)
T ss_dssp SSEEEEECTTCHHHHHHHHHHHTTSCCCGG---GEEEEEGGGST----THHHHHHHHHHHHSCCSSCEEE--ETT-EEEE
T ss_pred CCEEEEECCCCCchHHHHHHHHHhcCccCC---CcEEEEccccC----CHHHHHHHHHHHhCCCCCCEEE--ECC-EEEc
Confidence 5688888877777643 3333445 4 67778876421 3345555665544334467542 233 3445
Q ss_pred cccChhHH
Q 048643 264 AVDPLKPL 271 (506)
Q Consensus 264 ~idpl~~I 271 (506)
..|++.++
T Consensus 107 G~d~l~~l 114 (129)
T 3ctg_A 107 GNSDLETL 114 (129)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 55665544
No 352
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=28.59 E-value=1.8e+02 Score=23.66 Aligned_cols=68 Identities=12% Similarity=0.177 Sum_probs=37.9
Q ss_pred CCeEEEeC-----CCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 190 SKLVVYGS-----DQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 190 ~~~~v~~s-----~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
.+.+||.. ..+.+| +.+.+.-.|+ .+..+.++. |. .+++.+.+.......|.++ .-| ...
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv---~y~~vdI~~------d~-~~~~~L~~~~G~~tvP~Vf--I~G-~~i 101 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGE---RFAYVDILQ------NP-DIRAELPKYANWPTFPQLW--VDG-ELV 101 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCS---CCEEEEGGG------CH-HHHHHHHHHHTCCSSCEEE--ETT-EEE
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCC---ceEEEECCC------CH-HHHHHHHHHHCCCCcCEEE--ECC-EEE
Confidence 67788876 456554 3345556677 788888753 33 3455555544333456433 233 345
Q ss_pred CcccChhH
Q 048643 263 TAVDPLKP 270 (506)
Q Consensus 263 G~idpl~~ 270 (506)
|..|++.+
T Consensus 102 GG~d~l~~ 109 (135)
T 2wci_A 102 GGCDIVIE 109 (135)
T ss_dssp ESHHHHHH
T ss_pred EChHHHHH
Confidence 66676653
No 353
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=28.57 E-value=2.9e+02 Score=24.54 Aligned_cols=44 Identities=7% Similarity=-0.238 Sum_probs=29.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 60 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 103 (250)
T 3nyw_A 60 EPIVLPLD-----ITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL 103 (250)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
T ss_pred cceEEecc-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC
Confidence 67888877 347788888877654433345677888887666555
No 354
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=28.45 E-value=2e+02 Score=25.99 Aligned_cols=47 Identities=13% Similarity=-0.002 Sum_probs=31.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccCh
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPL 268 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl 268 (506)
++..+.+| --|.+++++.+++..++-...-++|-++|....+.+.++
T Consensus 48 ~~~~~~~D-----v~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~ 94 (247)
T 3ged_A 48 NLFYFHGD-----VADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSL 94 (247)
T ss_dssp TEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTC
T ss_pred CEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence 67888876 447788888877665443345567778887777766543
No 355
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=28.44 E-value=3.4e+02 Score=24.66 Aligned_cols=69 Identities=9% Similarity=0.079 Sum_probs=39.5
Q ss_pred EEEeCCCCchHHHHHHHHh-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 193 VVYGSDQTHCALQKAAQIV-GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++++....-....+.+..+ .....++..+++| --|.+.+++.+++..+.-..+-++|-++|....+.+.
T Consensus 52 V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~ 121 (281)
T 3v2h_A 52 IVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPAD-----MTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIE 121 (281)
T ss_dssp EEEECCCCHHHHHHHHHHHHTTCSSCEEEECCC-----TTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGG
T ss_pred EEEEeCCChHHHHHHHHHHhhccCCcEEEEeCC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcc
Confidence 4555442333344433322 2222378888876 3478888888876554433455777888876666553
No 356
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=28.43 E-value=3.3e+02 Score=24.53 Aligned_cols=102 Identities=17% Similarity=0.027 Sum_probs=54.3
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCC---------CCchHHHHHHHHhCCCCCCeEEEecCCCCC
Q 048643 158 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSD---------QTHCALQKAAQIVGIDLKNFRAIKTTKSSS 228 (506)
Q Consensus 158 ~g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~---------~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~ 228 (506)
..+..|||..+.+++..+ ++. |.+- .......+. ..+..+.+.|+.+|+ .+..+++....
T Consensus 7 vvvl~SGGkDSs~al~~l-~~~-----G~eV-~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGI---pl~~v~~~g~~- 75 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWA-IKN-----RFSV-KFLVTMVSENEESYMYHTINANLTDLQARALGI---PLVKGFTQGEK- 75 (237)
T ss_dssp EEEECCSSHHHHHHHHHH-HHT-----TCEE-EEEEEEECC--------CCSSSHHHHHHHHHTC---CEEEEEC-----
T ss_pred EEEEecCcHHHHHHHHHH-HHc-----CCeE-EEEEEEcCCCCCccccCCccHHHHHHHHHHcCC---CEEEEECCCCc-
Confidence 467889999888655543 321 1110 000111111 223467788999999 88888875321
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc---ChhHHHHHHHHhCCEEE
Q 048643 229 YGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 229 ~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id---pl~~I~~ia~~~g~~lh 283 (506)
.--.++|.+++++. |.. .| .+|.|+ --..+-.+|.+.|+...
T Consensus 76 -~~e~e~l~~~l~~~---~i~--~v-------v~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 76 -EKEVEDLKRVLSGL---KIQ--GI-------VAGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp ---CHHHHHHHHTTS---CCS--EE-------ECC---CCSHHHHHHHHHHHTTCEEE
T ss_pred -hHHHHHHHHHHHhc---CCc--EE-------EECCcchHHHHHHHHHHHHHcCCEEE
Confidence 23467777777542 211 11 256663 24567778999998764
No 357
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=28.17 E-value=29 Score=35.26 Aligned_cols=30 Identities=13% Similarity=0.009 Sum_probs=26.5
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
.+..|..++++++++-||++|+.+++|.++
T Consensus 72 d~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 72 RTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 456788999999999999999999999864
No 358
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=28.11 E-value=3e+02 Score=24.48 Aligned_cols=60 Identities=23% Similarity=0.200 Sum_probs=35.9
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
.|+..........+....+|. ++..+.+|- -|.+.+++.+++..+....+-++|-++|..
T Consensus 30 ~v~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 89 (254)
T 3kzv_A 30 VVYGVARSEAPLKKLKEKYGD---RFFYVVGDI-----TEDSVLKQLVNAAVKGHGKIDSLVANAGVL 89 (254)
T ss_dssp EEEEEESCHHHHHHHHHHHGG---GEEEEESCT-----TSHHHHHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred EEEEecCCHHHHHHHHHHhCC---ceEEEECCC-----CCHHHHHHHHHHHHHhcCCccEEEECCccc
Confidence 343332333445555555665 788888873 477888887776544333455677777753
No 359
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=28.03 E-value=2e+02 Score=25.82 Aligned_cols=44 Identities=9% Similarity=-0.142 Sum_probs=27.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccC-CCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGT-TAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gt-t~tG~i 265 (506)
++..+.+|- -|.+.+++.+++..+....+-+||-++|. ...+.+
T Consensus 79 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~ 123 (262)
T 3rkr_A 79 EAESHACDL-----SHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL 123 (262)
T ss_dssp EEEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCG
T ss_pred ceeEEEecC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCc
Confidence 778888763 47778887777654332245567777775 333444
No 360
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=27.97 E-value=30 Score=34.64 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=25.4
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
.+..|..++++++++-||++|+.+++|.++
T Consensus 80 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 80 ETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 455788888999999999999999999864
No 361
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=27.93 E-value=30 Score=35.11 Aligned_cols=30 Identities=20% Similarity=0.023 Sum_probs=26.4
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
....|..++++++++-||++|+.+++|.++
T Consensus 74 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 74 RTKYGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 345788999999999999999999999865
No 362
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=27.85 E-value=2.7e+02 Score=24.94 Aligned_cols=41 Identities=5% Similarity=-0.171 Sum_probs=25.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAI 262 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t 262 (506)
++..+++|- -|.+.+++.+++..+.-..+-+||-++|....
T Consensus 65 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 105 (267)
T 1iy8_A 65 EVLTTVADV-----SDEAQVEAYVTATTERFGRIDGFFNNAGIEGK 105 (267)
T ss_dssp CEEEEECCT-----TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred eEEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 788888763 47788888777644322234467777775433
No 363
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=27.76 E-value=3.5e+02 Score=27.50 Aligned_cols=52 Identities=4% Similarity=-0.136 Sum_probs=35.6
Q ss_pred HHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccC
Q 048643 207 AAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDP 267 (506)
Q Consensus 207 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idp 267 (506)
.++-.|. ++..+.+| --|.+++++.+++.. +...+-.||-++|....+.+.+
T Consensus 309 ~l~~~g~---~v~~~~~D-----vtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~ 360 (525)
T 3qp9_A 309 ELADLGA---TATVVTCD-----LTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAA 360 (525)
T ss_dssp HHHHHTC---EEEEEECC-----TTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTT
T ss_pred HHHhcCC---EEEEEECC-----CCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhh
Confidence 3344577 88999987 447889999888755 3234456777788776666644
No 364
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=27.71 E-value=28 Score=34.87 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=19.9
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
....|..++++++++-||++|+.+++|.++
T Consensus 63 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 63 KAEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344566677777777777777777777653
No 365
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=27.60 E-value=2.6e+02 Score=25.19 Aligned_cols=45 Identities=13% Similarity=-0.076 Sum_probs=29.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+|- -|.+.+++.+++..+.-..+-+||-++|....+.+.
T Consensus 76 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~ 120 (269)
T 3gk3_A 76 DFKAYAVDV-----ADFESCERCAEKVLADFGKVDVLINNAGITRDATFM 120 (269)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTT
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchh
Confidence 788888773 477788777766543322355778888866655543
No 366
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=27.54 E-value=3.1e+02 Score=24.47 Aligned_cols=44 Identities=7% Similarity=-0.077 Sum_probs=28.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 62 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 105 (256)
T 3gaf_A 62 KAIGLECN-----VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF 105 (256)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC
Confidence 78888887 347778887777654432245567777776555544
No 367
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=27.51 E-value=1.7e+02 Score=27.40 Aligned_cols=44 Identities=9% Similarity=0.049 Sum_probs=30.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.++++++...+....+-+||-++|....+.+
T Consensus 60 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 103 (319)
T 3ioy_A 60 EVMGVQLD-----VASREGFKMAADEVEARFGPVSILCNNAGVNLFQPI 103 (319)
T ss_dssp GEEEEECC-----TTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCG
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence 57778776 347888888887765544456678888886655554
No 368
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=27.34 E-value=29 Score=35.64 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=26.6
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
.+..|..++++++++-||++|+.+++|.++
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345788999999999999999999999864
No 369
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=27.02 E-value=31 Score=34.97 Aligned_cols=30 Identities=23% Similarity=0.143 Sum_probs=26.7
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
....|..++++++++-||++|+.+++|.++
T Consensus 76 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 76 RTKYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 456788999999999999999999999864
No 370
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=26.97 E-value=3e+02 Score=24.56 Aligned_cols=39 Identities=15% Similarity=0.068 Sum_probs=24.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
++..+++|- -|.+.+++.+++..+.-..+-+||-++|..
T Consensus 57 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 57 EARSYVCDV-----TSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cEEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 688888763 477888877776543322344677777754
No 371
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=26.95 E-value=3.3e+02 Score=24.00 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=27.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 55 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (246)
T 2uvd_A 55 DAIAVRAD-----VANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLL 98 (246)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 78888876 347788888777654332234567777776555443
No 372
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=26.72 E-value=30 Score=35.64 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=21.6
Q ss_pred CCCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 260 TAITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 260 t~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
...|..++++++++-||++|+.+++|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5567778888888888888888888864
No 373
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=26.58 E-value=30 Score=35.02 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=26.4
Q ss_pred ccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 257 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
......|..++++++++-||++|+.+++|.++
T Consensus 89 ~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 89 SLNENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp EECTTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34566788899999999999999999999764
No 374
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=26.43 E-value=2.9e+02 Score=25.09 Aligned_cols=42 Identities=14% Similarity=-0.012 Sum_probs=27.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..+++| --|.+.+++.+++..+....+-++|-++|....+
T Consensus 77 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 118 (286)
T 3uve_A 77 RIVTAEVD-----VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG 118 (286)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC
Confidence 78888887 3477888887776544322455677777765544
No 375
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=26.33 E-value=2e+02 Score=27.78 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=51.9
Q ss_pred CchHHHHHHHHhCCCCCCeEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEeccC-C---CCCcccChhHHHHH
Q 048643 200 THCALQKAAQIVGIDLKNFRAIKTTKSSSYG-LSPDSLLTQINLDVEAGLVPLFLCATIGT-T---AITAVDPLKPLCDV 274 (506)
Q Consensus 200 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~p~~Vv~t~gt-t---~tG~idpl~~I~~i 274 (506)
.+..+.+.+.-.| ..+.+.. |. .+++.++.+++.....|...+++ +-.|+ + ++=..-++..|..+
T Consensus 201 ~n~~LL~~va~~~----kPVilk~-----G~~~tl~ei~~Ave~i~~~GN~~viL-ceRG~~typ~~~~~~vdl~ai~~l 270 (350)
T 1vr6_A 201 QNFRLLSKAGSYN----KPVLLKR-----GFMNTIEEFLLSAEYIANSGNTKIIL-CERGIRTFEKATRNTLDISAVPII 270 (350)
T ss_dssp TCHHHHHHHHTTC----SCEEEEC-----CTTCCHHHHHHHHHHHHHTTCCCEEE-EECCBCCSCCSSSSBCCTTHHHHH
T ss_pred cCHHHHHHHHccC----CcEEEcC-----CCCCCHHHHHHHHHHHHHCCCCeEEE-EeCCCCCCCCcChhhhhHHHHHHH
Confidence 3444444443233 4555653 34 48999999998877777654444 32332 2 22233467888888
Q ss_pred HHHhCCEEEeecccccc
Q 048643 275 AKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 275 a~~~g~~lhVDaA~gg~ 291 (506)
.+.+++.+.+|..|+.+
T Consensus 271 k~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 271 RKESHLPILVDPSHSGG 287 (350)
T ss_dssp HHHBSSCEEECHHHHHC
T ss_pred HHhhCCCEEEeCCCCCc
Confidence 88889999999999865
No 376
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=26.16 E-value=91 Score=24.94 Aligned_cols=50 Identities=8% Similarity=0.133 Sum_probs=33.0
Q ss_pred ccCHHHHHHHHHHHHhcC-----CccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEE
Q 048643 230 GLSPDSLLTQINLDVEAG-----LVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 283 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~g-----~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lh 283 (506)
..|++.+.+.|++..++. ..|+++-+..-. .-.++.+|.++|+++|+.++
T Consensus 24 ~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 24 EAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp SCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 347888888887665442 345544443222 23579999999999998774
No 377
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=26.02 E-value=3.4e+02 Score=23.91 Aligned_cols=44 Identities=11% Similarity=0.006 Sum_probs=26.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCC-CCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTA-ITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~-tG~i 265 (506)
++..+++| --|.+.+++++++..+....+-+|+-++|... .+.+
T Consensus 63 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~ 107 (260)
T 3awd_A 63 DVSSVVMD-----VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKA 107 (260)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCT
T ss_pred ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCc
Confidence 78888876 34778888877754333223446777776544 3443
No 378
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=25.97 E-value=3.1e+02 Score=24.24 Aligned_cols=53 Identities=13% Similarity=-0.027 Sum_probs=31.8
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
...+..+.++. ++..+++|- -|.+.+++++++..+....+-+||-++|....+
T Consensus 48 ~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~ 100 (265)
T 2o23_A 48 GGEAQAKKLGN---NCVFAPADV-----TSEKDVQTALALAKGKFGRVDVAVNCAGIAVAS 100 (265)
T ss_dssp SHHHHHHHHCT---TEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred hHHHHHHHhCC---ceEEEEcCC-----CCHHHHHHHHHHHHHHCCCCCEEEECCccCCCC
Confidence 34444455565 788888773 477788877765443322344677777755444
No 379
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=25.87 E-value=3.4e+02 Score=23.88 Aligned_cols=49 Identities=18% Similarity=0.031 Sum_probs=31.7
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
..|. ++..+++| --|.+.+++.+++..+....+-++|-++|....+.+.
T Consensus 51 ~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 99 (246)
T 3osu_A 51 AKGV---DSFAIQAN-----VADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLM 99 (246)
T ss_dssp HTTS---CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTT
T ss_pred hcCC---cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 3455 78888876 3477888887776544322455677788766655543
No 380
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=25.57 E-value=3.7e+02 Score=24.16 Aligned_cols=44 Identities=11% Similarity=-0.108 Sum_probs=28.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAG-LVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++++++..+.- ..+-++|-++|....+.+
T Consensus 71 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 115 (273)
T 1ae1_A 71 NVEGSVCD-----LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEA 115 (273)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCT
T ss_pred ceEEEECC-----CCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCCh
Confidence 78888876 347788888777654432 234567777776555544
No 381
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=25.43 E-value=28 Score=34.91 Aligned_cols=29 Identities=28% Similarity=0.454 Sum_probs=23.3
Q ss_pred CCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 260 TAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 260 t~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+..|..++++++++-||++|+.+++|.++
T Consensus 78 ~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 78 PEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 44677788888888888888888888754
No 382
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=25.40 E-value=32 Score=34.05 Aligned_cols=29 Identities=17% Similarity=0.145 Sum_probs=24.2
Q ss_pred CCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 260 TAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 260 t~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
...|..++++++++-||++|+.+++|.++
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 45688888999999999999999998764
No 383
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=25.21 E-value=2.2e+02 Score=21.42 Aligned_cols=69 Identities=12% Similarity=0.129 Sum_probs=38.8
Q ss_pred CCeEEEeCCCCchH--HHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-hcCCccEEEEEeccCCCCCccc
Q 048643 190 SKLVVYGSDQTHCA--LQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDV-EAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 190 ~~~~v~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p~~Vv~t~gtt~tG~id 266 (506)
.+.+||....+.+| +.+.+.-.|+ .+..+.++. +. .+++.+.+.. .....|.+++ -| ...|..|
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~~i---~y~~idI~~------~~-~~~~~l~~~~~g~~~vP~ifi--~g-~~igG~d 82 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRKGV---EFQEYCIDG------DN-EAREAMAARANGKRSLPQIFI--DD-QHIGGCD 82 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHHTC---CCEEEECTT------CH-HHHHHHHHHTTTCCCSCEEEE--TT-EEEESHH
T ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC---CCEEEEcCC------CH-HHHHHHHHHhCCCCCCCEEEE--CC-EEEeChH
Confidence 56778877777765 3355666788 888888864 33 3344444433 3344675432 23 3445555
Q ss_pred ChhHH
Q 048643 267 PLKPL 271 (506)
Q Consensus 267 pl~~I 271 (506)
++.++
T Consensus 83 ~l~~~ 87 (99)
T 3qmx_A 83 DIYAL 87 (99)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 384
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=25.07 E-value=2.8e+02 Score=25.05 Aligned_cols=45 Identities=9% Similarity=-0.073 Sum_probs=29.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+++| --|.+.+++.+++..+....+-++|-++|....+.+.
T Consensus 72 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 116 (281)
T 3s55_A 72 RCISAKVD-----VKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLP 116 (281)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTT
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence 78888887 3477888887776544322455677778766655553
No 385
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.90 E-value=29 Score=30.59 Aligned_cols=48 Identities=23% Similarity=0.324 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhC--CEEEeeccccc
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAG 290 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g--~~lhVDaA~gg 290 (506)
|.+.|+++++...+ +|++ .+|.+..|+++.+.++++| +.+|+|-.-|.
T Consensus 18 ~~~~l~~al~s~~~------~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl 67 (192)
T 3kts_A 18 NQKDMEKILELDLT------YMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVNGL 67 (192)
T ss_dssp SSHHHHHHTTSSCC------EEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEETC
T ss_pred CHHHHHHHHcCCCC------EEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchhcc
Confidence 67789988865422 2333 2477899999999999997 56788876543
No 386
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=24.89 E-value=3.6e+02 Score=24.18 Aligned_cols=45 Identities=16% Similarity=-0.136 Sum_probs=26.3
Q ss_pred CeEEEecCCCCCcccCH----HHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 217 NFRAIKTTKSSSYGLSP----DSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~----~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
++..+.+|-. |. +.+++.+++..+....+-+||-++|....+.+.
T Consensus 63 ~~~~~~~Dl~-----~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 111 (276)
T 1mxh_A 63 SAVLCKGDLS-----LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLL 111 (276)
T ss_dssp CEEEEECCCS-----SSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSC
T ss_pred ceEEEeccCC-----CccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence 7888887642 44 667766665433222345677777765544443
No 387
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=24.87 E-value=2.9e+02 Score=24.67 Aligned_cols=44 Identities=16% Similarity=0.077 Sum_probs=26.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+.-..+-+||-++|....+.+
T Consensus 54 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~ 97 (260)
T 1nff_A 54 AARYVHLD-----VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI 97 (260)
T ss_dssp GEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred CceEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 46777776 347788888777544332234567777776555444
No 388
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=24.83 E-value=78 Score=29.31 Aligned_cols=23 Identities=35% Similarity=0.444 Sum_probs=19.0
Q ss_pred cccChhHHHHHHHHhCCEEEeec
Q 048643 264 AVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 264 ~idpl~~I~~ia~~~g~~lhVDa 286 (506)
..+.++++.++|+++|+.+++|-
T Consensus 88 ~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 88 MLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEe
Confidence 34668999999999999997764
No 389
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=24.80 E-value=2.9e+02 Score=24.59 Aligned_cols=44 Identities=16% Similarity=0.104 Sum_probs=26.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++++++..+....+-+||-++|....+.+
T Consensus 59 ~~~~~~~D-----~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~ 102 (263)
T 3ak4_A 59 GGFAVEVD-----VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPA 102 (263)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCG
T ss_pred CCeEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence 56677766 347788887776544332234567777775544433
No 390
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=24.74 E-value=82 Score=30.90 Aligned_cols=58 Identities=19% Similarity=0.219 Sum_probs=38.6
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEeccCC-CCCcccChhHHHHHHHHhCCEEEeecc
Q 048643 230 GLSPDSLLTQINLDVEAGLVPLFLCATIGTT-AITAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 230 ~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt-~tG~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
.-+.+...+.|+...+.|..-++..+-.+.. ..-.+..+++|.+.|+++|+-+++|=+
T Consensus 37 ~~~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVs 95 (385)
T 1x7f_A 37 HSTKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVA 95 (385)
T ss_dssp GSCHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 3456677788888888887655544433322 223446799999999999999999964
No 391
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=24.58 E-value=69 Score=29.25 Aligned_cols=36 Identities=31% Similarity=0.387 Sum_probs=28.2
Q ss_pred ccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeec
Q 048643 249 VPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 286 (506)
Q Consensus 249 ~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDa 286 (506)
.-.+|++|-|.+..|. ||+ +.+++++++|+-+|+=|
T Consensus 10 ~k~iillTDG~~~~g~-~p~-~aa~~a~~~gi~v~tIG 45 (242)
T 3rag_A 10 IRQILVITDGCSNIGP-DPV-EAARRAHRHGIVVNVIG 45 (242)
T ss_dssp EEEEEEEESSCCCSSS-CHH-HHHHHHHHTTCEEEEEE
T ss_pred ccEEEEEccCCCCCCC-CHH-HHHHHHHHCCCEEEEEE
Confidence 4467889999988886 777 55678999999988744
No 392
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=24.52 E-value=2.8e+02 Score=25.44 Aligned_cols=43 Identities=9% Similarity=-0.089 Sum_probs=28.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
++..+++| --|.+.+++.+++..+....+-++|-++|....+.
T Consensus 90 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 132 (299)
T 3t7c_A 90 RIIASQVD-----VRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGT 132 (299)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred ceEEEECC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 78888887 34788888887765443224556777777655443
No 393
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=24.51 E-value=3e+02 Score=24.49 Aligned_cols=44 Identities=11% Similarity=-0.053 Sum_probs=27.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+.-..+-++|-++|....+.+
T Consensus 54 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 97 (258)
T 3a28_C 54 KAVFVGLD-----VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPL 97 (258)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 78888876 347778877776543322234467777776554443
No 394
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=24.40 E-value=1.7e+02 Score=27.51 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=23.4
Q ss_pred CeEEEeCCCC-chHHHHHHHHhCCCCCCeEEEecC
Q 048643 191 KLVVYGSDQT-HCALQKAAQIVGIDLKNFRAIKTT 224 (506)
Q Consensus 191 ~~~v~~s~~~-H~s~~ka~~~~G~g~~~v~~v~~~ 224 (506)
+.+|+++... -..-.+.++.+|. +|+.++.+
T Consensus 97 ~~~iv~p~~~~~~~k~~~~~~~GA---~v~~~~~~ 128 (325)
T 1j0a_A 97 DAILVLRGKEELKGNYLLDKIMGI---ETRVYDAK 128 (325)
T ss_dssp EEEEEEESCCCSCHHHHHHHHTTC---EEEEESCC
T ss_pred cEEEEECCCCCCCchHHHHHHCCC---EEEEeCcc
Confidence 4677788776 5566677888999 99888754
No 395
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=24.32 E-value=2.7e+02 Score=25.16 Aligned_cols=59 Identities=15% Similarity=0.004 Sum_probs=34.3
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
+++++. ......+.+..+|. ++..+.+|- -|.+.+++.+++..+.-..+-++|-++|..
T Consensus 38 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 38 VVLADL-PETDLAGAAASVGR---GAVHHVVDL-----TNEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp EEEEEC-TTSCHHHHHHHHCT---TCEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEcC-CHHHHHHHHHHhCC---CeEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 444443 23345555555566 778888763 477788877776543322344677777654
No 396
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=24.30 E-value=3.8e+02 Score=25.01 Aligned_cols=49 Identities=12% Similarity=0.030 Sum_probs=32.4
Q ss_pred HhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 210 IVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 210 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
..|. ++..+++| --|.+.+++++++..+....+-+||-++|....|.+.
T Consensus 56 ~~~~---~~~~~~~D-----vtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~ 104 (324)
T 3u9l_A 56 DNDV---DLRTLELD-----VQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAE 104 (324)
T ss_dssp HHTC---CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGG
T ss_pred hcCC---cEEEEEee-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChh
Confidence 3465 78888887 3478888888876544323455778888866666553
No 397
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=24.29 E-value=2.8e+02 Score=24.51 Aligned_cols=38 Identities=8% Similarity=-0.055 Sum_probs=24.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGT 259 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gt 259 (506)
++..+++| --|.+.+++.+++..+....+-+|+-++|.
T Consensus 59 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 59 TAISVAVD-----VSDPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp EEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 77888876 347778877777654332235567777765
No 398
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=24.10 E-value=38 Score=34.72 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=22.2
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
....|..++++++++-||++|+.+++|.++
T Consensus 73 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 73 DPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 445677777888888888888888887754
No 399
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=23.99 E-value=2.3e+02 Score=25.48 Aligned_cols=44 Identities=5% Similarity=-0.033 Sum_probs=29.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 64 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 107 (262)
T 3ksu_A 64 KVALYQSD-----LSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPI 107 (262)
T ss_dssp EEEEEECC-----CCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888887 347888888877654443345577778876665554
No 400
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=23.86 E-value=2.9e+02 Score=25.75 Aligned_cols=44 Identities=16% Similarity=-0.105 Sum_probs=28.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+
T Consensus 87 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 130 (322)
T 3qlj_A 87 EAVADGSN-----VADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMI 130 (322)
T ss_dssp EEEEECCC-----TTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 77888776 347788888777654432235577778876665544
No 401
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.83 E-value=3.2e+02 Score=24.57 Aligned_cols=42 Identities=7% Similarity=-0.075 Sum_probs=23.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..+++| --|.+.+++++++..+.-..+-+||-++|....+
T Consensus 59 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~ 100 (278)
T 1spx_A 59 NVNSVVAD-----VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 100 (278)
T ss_dssp GEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCC-----
T ss_pred ceeEEecc-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCc
Confidence 67778876 3477888887765433222344677777755444
No 402
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=23.63 E-value=4.2e+02 Score=24.39 Aligned_cols=84 Identities=13% Similarity=-0.024 Sum_probs=53.0
Q ss_pred CCchHHHHHHHHhCCCCCCeEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC---cccChhHHHHH
Q 048643 199 QTHCALQKAAQIVGIDLKNFRAIKTTKSSSYG-LSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT---AVDPLKPLCDV 274 (506)
Q Consensus 199 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG---~idpl~~I~~i 274 (506)
..+..+.+.+.-.|. .+.+.. |. .+++.++.+++.....|...++++--..++..+ ..-++..|..+
T Consensus 132 ~~n~~ll~~~a~~~k----PV~lk~-----G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~l 202 (276)
T 1vs1_A 132 MQNFPLLREVGRSGK----PVLLKR-----GFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVL 202 (276)
T ss_dssp TTCHHHHHHHHHHTC----CEEEEC-----CTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHH
T ss_pred ccCHHHHHHHHccCC----eEEEcC-----CCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHH
Confidence 345555655554554 455653 34 499999999988777775443332212223223 22457778887
Q ss_pred HHHhCCEEEeecccccc
Q 048643 275 AKQFGIWVHVDAAYAGS 291 (506)
Q Consensus 275 a~~~g~~lhVDaA~gg~ 291 (506)
.+.+++.+.+|..|+.+
T Consensus 203 k~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 203 KEATHLPVIVDPSHPAG 219 (276)
T ss_dssp HHHBSSCEEECCHHHHC
T ss_pred HHHhCCCEEEeCCCCCC
Confidence 77789999899999865
No 403
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=23.61 E-value=3.5e+02 Score=24.26 Aligned_cols=49 Identities=16% Similarity=0.106 Sum_probs=31.6
Q ss_pred HHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 209 QIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 209 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
+..|. ++..+++|- -|.+.+++.+++..+....+-+||-++|....+.+
T Consensus 75 ~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 123 (271)
T 4iin_A 75 EEKGY---KAAVIKFDA-----ASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLA 123 (271)
T ss_dssp HHTTC---CEEEEECCT-----TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCG
T ss_pred HhcCC---ceEEEECCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCccc
Confidence 33455 788888873 47778777777654432345577888877665544
No 404
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=23.57 E-value=3.6e+02 Score=24.11 Aligned_cols=44 Identities=9% Similarity=-0.021 Sum_probs=29.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+|- -|.+.+++.+++..+....+-+||-++|....+.+
T Consensus 77 ~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~ 120 (267)
T 4iiu_A 77 NGRLLSFDV-----ANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAF 120 (267)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCcc
Confidence 788888763 47788888877654433345567777776665554
No 405
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=23.47 E-value=4.3e+02 Score=24.22 Aligned_cols=64 Identities=11% Similarity=0.054 Sum_probs=39.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~ 293 (506)
.++.|-+. ..+++.|+++++.. +..|.++-.. .++ .++-.++.+.|+++|+-+++=+..+++.+
T Consensus 155 kir~iGvS-----n~~~~~l~~~~~~~---~~~p~~~Q~~--~~~---~~~~~~l~~~~~~~gi~v~a~spL~~G~l 218 (283)
T 3o0k_A 155 RVKSIGVS-----NFRTADLERLIKES---GVTPVLNQIE--LHP---QFQQDELRLFHGKHDIATEAWSPLGQGKL 218 (283)
T ss_dssp SEEEEEEE-----SCCHHHHHHHHHHH---SCCCSEEEEE--CBT---TBCCHHHHHHHHHTTCEEEEESTTCCC-C
T ss_pred CcceEEec-----cCcHHHHHHHHHhC---CCCeEEEEee--cCc---ccCcHHHHHHHHHCCcEEEEecCCCCCcc
Confidence 58888775 34678888887643 2334332222 122 22346899999999999987766665543
No 406
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.34 E-value=4e+02 Score=23.77 Aligned_cols=38 Identities=5% Similarity=-0.149 Sum_probs=25.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGT 259 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gt 259 (506)
++..+.+|- -|.+.+++.+++..+.-..+-++|-++|.
T Consensus 61 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 61 RALSVGTDI-----TDDAQVAHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHTSCCSEEEECCCS
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCcEEEECCCC
Confidence 788888873 47888888887655443344566666654
No 407
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=23.30 E-value=99 Score=30.15 Aligned_cols=56 Identities=18% Similarity=0.132 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEeccCCCC-CcccChhHHHHHHHHhCCEEEeecc
Q 048643 232 SPDSLLTQINLDVEAGLVPLFLCATIGTTAI-TAVDPLKPLCDVAKQFGIWVHVDAA 287 (506)
Q Consensus 232 d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~t-G~idpl~~I~~ia~~~g~~lhVDaA 287 (506)
..+.-++.|+...+.|..-++..+-.+.... -.+..+++|.++|+++|+-+++|=+
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIs 71 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDIS 71 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 4455567788888888876665555443222 3346789999999999999999964
No 408
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=23.28 E-value=2.8e+02 Score=25.23 Aligned_cols=53 Identities=11% Similarity=-0.023 Sum_probs=33.8
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
+.....|. ++..+.+| --|.+.+++.+++..+....+-++|-++|....+.+.
T Consensus 58 ~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 110 (285)
T 3sc4_A 58 KEIEEAGG---QALPIVGD-----IRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIE 110 (285)
T ss_dssp HHHHHHTS---EEEEEECC-----TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTT
T ss_pred HHHHhcCC---cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 33344466 78888887 3477888887776544322455677888876666554
No 409
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=22.90 E-value=4.2e+02 Score=23.88 Aligned_cols=44 Identities=18% Similarity=-0.029 Sum_probs=28.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++++++..+.-..+-+||-++|....+.+
T Consensus 78 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 121 (276)
T 2b4q_A 78 DCQAIPAD-----LSSEAGARRLAQALGELSARLDILVNNAGTSWGAAL 121 (276)
T ss_dssp CEEECCCC-----TTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCT
T ss_pred ceEEEEee-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence 57777776 347888888877654433345567777776555544
No 410
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=22.87 E-value=4.5e+02 Score=24.18 Aligned_cols=120 Identities=8% Similarity=0.001 Sum_probs=59.0
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEe---------cCCCC--
Q 048643 159 GVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIK---------TTKSS-- 227 (506)
Q Consensus 159 g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~---------~~~~~-- 227 (506)
.....||+.+|. |..++|- |.+ ...+-.+.+..-..+.+.++-.|+....++.++ ++..+
T Consensus 34 ~~~~~GG~~~Nv-A~~la~L------G~~--~~~i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~g~~~ 104 (320)
T 3ie7_A 34 TEFDCGGKGLHV-SGVLSKF------GIK--NEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNG 104 (320)
T ss_dssp EEEEEESHHHHH-HHHHHHH------TCC--EEEEEEEESTTHHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEETTCSC
T ss_pred eeecCCchHHHH-HHHHHHc------CCC--eEEEEEecCchHHHHHHHHHHcCCceEEEEecCCCCceEEEEEECCCce
Confidence 456677887774 4444432 111 122222344322356667777787544331211 11111
Q ss_pred -------CcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc-ccChhHHHHHHHHhCCEEEeeccc
Q 048643 228 -------SYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA-VDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 228 -------~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~-idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
+-.++.+.+.+.++.....-...-+|++ .|..+.+. .+-+.++.+.|+++|+.+.+|-..
T Consensus 105 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 172 (320)
T 3ie7_A 105 STMIPEAGFTVSQTNKDNLLKQIAKKVKKEDMVVI-AGSPPPHYTLSDFKELLRTVKATGAFLGCDNSG 172 (320)
T ss_dssp CEEEECCCCCCCHHHHHHHHHHHHHHCCTTCEEEE-ESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHhcCCCEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh
Confidence 1145667766554332111111223443 33333222 234678888889999999999753
No 411
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=22.84 E-value=37 Score=35.47 Aligned_cols=29 Identities=31% Similarity=0.433 Sum_probs=17.4
Q ss_pred CCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 260 TAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 260 t~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
...|..++++++++-||++|+.+++|.++
T Consensus 217 p~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 217 PHFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34555566666666666666666666543
No 412
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=22.81 E-value=3.7e+02 Score=23.56 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=31.7
Q ss_pred HHHHHHHHhCCCCCCe-EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 203 ALQKAAQIVGIDLKNF-RAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v-~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
...+....++. ++ ..+..| --|.+.+++++++..+.+ .+-+|+-++|....+.+
T Consensus 47 ~~~~~~~~~~~---~~~~~~~~D-----~~~~~~~~~~~~~~~~~~-~id~li~~Ag~~~~~~~ 101 (254)
T 2wsb_A 47 ALDRAAQELGA---AVAARIVAD-----VTDAEAMTAAAAEAEAVA-PVSILVNSAGIARLHDA 101 (254)
T ss_dssp HHHHHHHHHGG---GEEEEEECC-----TTCHHHHHHHHHHHHHHS-CCCEEEECCCCCCCBCS
T ss_pred HHHHHHHHhcc---cceeEEEEe-----cCCHHHHHHHHHHHHhhC-CCcEEEECCccCCCCCc
Confidence 34444444454 56 677766 347888888876644322 34567777776555544
No 413
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=22.70 E-value=3.1e+02 Score=24.81 Aligned_cols=43 Identities=5% Similarity=-0.089 Sum_probs=25.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+.+|- -|.+.+++.+++..+.| .+-++|-++|....+.+
T Consensus 83 ~~~~~~~Dv-----~~~~~~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~ 125 (275)
T 4imr_A 83 TAQELAGDL-----SEAGAGTDLIERAEAIA-PVDILVINASAQINATL 125 (275)
T ss_dssp CEEEEECCT-----TSTTHHHHHHHHHHHHS-CCCEEEECCCCCCCBCG
T ss_pred eEEEEEecC-----CCHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCc
Confidence 788888774 24556666665544333 34567777776555544
No 414
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=22.56 E-value=3.3e+02 Score=24.38 Aligned_cols=61 Identities=13% Similarity=0.017 Sum_probs=33.7
Q ss_pred EEEeCCCCchHHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhc-C--CccEEEEEeccCCC
Q 048643 193 VVYGSDQTHCALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEA-G--LVPLFLCATIGTTA 261 (506)
Q Consensus 193 ~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g--~~p~~Vv~t~gtt~ 261 (506)
+++++........+....++- ++..+++| --|.+.+++.+++..+. | ..+-++|-++|...
T Consensus 36 V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~ 99 (269)
T 2h7i_A 36 LVLTGFDRLRLIQRITDRLPA---KAPLLELD-----VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMP 99 (269)
T ss_dssp EEEEECSCHHHHHHHHTTSSS---CCCEEECC-----TTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCC
T ss_pred EEEEecChHHHHHHHHHhcCC---CceEEEcc-----CCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCc
Confidence 444444333223444444443 56677776 34777888777765432 2 14556777777544
No 415
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=22.52 E-value=4.2e+02 Score=24.09 Aligned_cols=39 Identities=5% Similarity=-0.126 Sum_probs=25.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|..
T Consensus 98 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 98 KCVLLPGD-----LSDEQHCKDIVQETVRQLGSLNILVNNVAQQ 136 (291)
T ss_dssp CEEEEESC-----TTSHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCc
Confidence 78888887 3477888887776544322344566666643
No 416
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=22.48 E-value=3.5e+02 Score=25.69 Aligned_cols=53 Identities=8% Similarity=-0.061 Sum_probs=33.5
Q ss_pred HHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCccc
Q 048643 206 KAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVD 266 (506)
Q Consensus 206 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~id 266 (506)
+..+..|. ++..+.+| --|.+.+++++++..+.-..+-+||-++|....+.+.
T Consensus 94 ~~~~~~g~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~ 146 (346)
T 3kvo_A 94 EEIEAVGG---KALPCIVD-----VRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTL 146 (346)
T ss_dssp HHHHHTTC---EEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTT
T ss_pred HHHHhcCC---eEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 33344455 78888876 3478888888876654322455777778766555443
No 417
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=22.25 E-value=32 Score=34.86 Aligned_cols=30 Identities=17% Similarity=0.205 Sum_probs=26.4
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
.+..|..++++++++-||++|+.+++|.++
T Consensus 68 dp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 68 NTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp EETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345788999999999999999999999864
No 418
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=22.22 E-value=4.1e+02 Score=23.53 Aligned_cols=44 Identities=11% Similarity=-0.114 Sum_probs=28.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAG-LVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++.+++..+.- ..+-+||-++|....+.+
T Consensus 59 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 103 (260)
T 2ae2_A 59 KVEASVCD-----LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEA 103 (260)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCCh
Confidence 67778776 347888888887654432 245567777776554443
No 419
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.18 E-value=34 Score=34.52 Aligned_cols=16 Identities=13% Similarity=0.285 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhcCC
Q 048643 233 PDSLLTQINLDVEAGL 248 (506)
Q Consensus 233 ~~~L~~~i~~~~~~g~ 248 (506)
.++|++.+++..++|.
T Consensus 96 ~~df~~lv~~~h~~Gi 111 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGV 111 (475)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCC
Confidence 4566666666655553
No 420
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=22.18 E-value=34 Score=34.70 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=24.6
Q ss_pred ccCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 257 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 257 ~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
......|..++++++++-||++|+.+++|.++
T Consensus 89 ~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 89 DVNSNFGTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp EECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34456777888888888888888888888754
No 421
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=21.93 E-value=3.2e+02 Score=24.65 Aligned_cols=44 Identities=11% Similarity=-0.069 Sum_probs=26.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccC-CCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGT-TAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gt-t~tG~i 265 (506)
++..+.+| --|.+.+++.+++..+....+-++|-++|. ...+.+
T Consensus 64 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 108 (281)
T 3svt_A 64 AIRYEPTD-----ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPI 108 (281)
T ss_dssp EEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCG
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCc
Confidence 57777776 347788888887654432234567777764 333433
No 422
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=21.91 E-value=36 Score=34.54 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=25.8
Q ss_pred CCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 259 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 259 tt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
....|..++++++++-||++|+.+++|.++
T Consensus 75 dp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 75 NPDYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 445788899999999999999999999864
No 423
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=21.47 E-value=4e+02 Score=23.13 Aligned_cols=44 Identities=14% Similarity=-0.043 Sum_probs=28.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+..| --|.+.+++++++..+.-..+-+|+-++|....+.+
T Consensus 58 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~ 101 (248)
T 2pnf_A 58 KAHGVEMN-----LLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLF 101 (248)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCG
T ss_pred ceEEEEcc-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCcc
Confidence 78888876 347888888887654432234467777776554443
No 424
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.30 E-value=4.5e+02 Score=23.58 Aligned_cols=42 Identities=7% Similarity=-0.074 Sum_probs=28.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..+++| --|.+.+++.+++..+....+-++|-++|....+
T Consensus 72 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 113 (287)
T 3pxx_A 72 KAYTAEVD-----VRDRAAVSRELANAVAEFGKLDVVVANAGICPLG 113 (287)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc
Confidence 78888887 3478888887776544323455677777766555
No 425
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=21.18 E-value=2.8e+02 Score=24.71 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=25.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIG 258 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~g 258 (506)
++..+.+|- -|.+.+++.+++..+....+-+||-++|
T Consensus 58 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 58 RLQFVQADV-----TKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp GEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 788888773 4778888887765443224556777777
No 426
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=21.16 E-value=39 Score=33.71 Aligned_cols=31 Identities=19% Similarity=0.137 Sum_probs=27.1
Q ss_pred cCCCCCcccChhHHHHHHHHhCCEEEeeccc
Q 048643 258 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 288 (506)
Q Consensus 258 gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~ 288 (506)
.....|..++++++++-||++|+.+++|.++
T Consensus 74 idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 74 IDPNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3456788999999999999999999999865
No 427
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=20.94 E-value=2.9e+02 Score=21.97 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=42.3
Q ss_pred CCeEEEeCCCCchHHH--HHHHHh---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCc
Q 048643 190 SKLVVYGSDQTHCALQ--KAAQIV---GIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITA 264 (506)
Q Consensus 190 ~~~~v~~s~~~H~s~~--ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~ 264 (506)
.+.+||....+.+|.. +...-. |+ ....+.++. .-|.+.+++.+.+.......|.+++ .| ...|.
T Consensus 14 ~~Vvvysk~~Cp~C~~ak~lL~~~~~~~v---~~~~idid~----~~d~~~~~~~l~~~~G~~tVP~IfI--~G-~~IGG 83 (127)
T 3l4n_A 14 SPIIIFSKSTCSYSKGMKELLENEYQFIP---NYYIIELDK----HGHGEELQEYIKLVTGRGTVPNLLV--NG-VSRGG 83 (127)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHHEEEES---CCEEEEGGG----STTHHHHHHHHHHHHSCCSSCEEEE--TT-EECCC
T ss_pred CCEEEEEcCCCccHHHHHHHHHHhcccCC---CcEEEEecC----CCCHHHHHHHHHHHcCCCCcceEEE--CC-EEEcC
Confidence 5678887776666532 333332 45 677777763 2366778888876554445675433 33 34566
Q ss_pred ccChhHH
Q 048643 265 VDPLKPL 271 (506)
Q Consensus 265 idpl~~I 271 (506)
.|++.++
T Consensus 84 ~ddl~~l 90 (127)
T 3l4n_A 84 NEEIKKL 90 (127)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6766544
No 428
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.83 E-value=4e+02 Score=23.47 Aligned_cols=54 Identities=7% Similarity=0.129 Sum_probs=32.6
Q ss_pred EEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHhCCCCCCeEEEec
Q 048643 160 VIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIVGIDLKNFRAIKT 223 (506)
Q Consensus 160 ~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~G~g~~~v~~v~~ 223 (506)
++.|| +.+|+.+|.-+... +.- .-+.+.++|+..-..+.+.|+..|+ .+..++.
T Consensus 7 vl~Sg-~Gsnl~ali~~~~~-----~~l-~~eI~~Visn~~~a~v~~~A~~~gI---p~~~~~~ 60 (211)
T 3p9x_A 7 IFASG-SGTNAEAIIQSQKA-----GQL-PCEVALLITDKPGAKVVERVKVHEI---PVCALDP 60 (211)
T ss_dssp EECCT-TCHHHHHHHHHHHT-----TCC-SSEEEEEEESCSSSHHHHHHHTTTC---CEEECCG
T ss_pred EEEeC-CchHHHHHHHHHHc-----CCC-CcEEEEEEECCCCcHHHHHHHHcCC---CEEEeCh
Confidence 44443 44688888765432 100 0245566666555567788888999 7777654
No 429
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=20.79 E-value=4.2e+02 Score=23.05 Aligned_cols=42 Identities=19% Similarity=0.094 Sum_probs=23.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCC
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAIT 263 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG 263 (506)
++..+..|- -|.+.+++.+++..+....+-+|+-++|....+
T Consensus 56 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~ 97 (247)
T 2hq1_A 56 NVVVAKGDV-----KNPEDVENMVKTAMDAFGRIDILVNNAGITRDT 97 (247)
T ss_dssp CEEEEESCT-----TSHHHHHHHHHHHHHHHSCCCEEEECC------
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 788888763 477888887775433322344677776654433
No 430
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=20.65 E-value=4.4e+02 Score=23.25 Aligned_cols=44 Identities=9% Similarity=-0.105 Sum_probs=27.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAV 265 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~i 265 (506)
++..+++| --|.+.+++++++..+.-..+-+||-++|....+.+
T Consensus 52 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 95 (255)
T 2q2v_A 52 KAVHHPAD-----LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPV 95 (255)
T ss_dssp CEEEECCC-----TTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCG
T ss_pred ceEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 67778776 347788888777544332234467777775544433
No 431
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=20.60 E-value=30 Score=34.43 Aligned_cols=14 Identities=43% Similarity=0.624 Sum_probs=9.0
Q ss_pred CCCeeEEcCccccC
Q 048643 307 GADSFSLNAHKWFF 320 (506)
Q Consensus 307 ~aDsi~~~~hK~l~ 320 (506)
++|-+-+|.-|.+.
T Consensus 166 gvDGfR~D~~~~~~ 179 (422)
T 1ua7_A 166 GADGFRFDAAKHIE 179 (422)
T ss_dssp TCCEEEETTGGGSC
T ss_pred CCCEEEEEhhhhcC
Confidence 56777777666554
No 432
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=20.60 E-value=5.8 Score=26.67 Aligned_cols=44 Identities=20% Similarity=0.403 Sum_probs=21.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Q 048643 1 MGSLTSDQLDGNSGLVINPLDPEEFRRQAHMVIDFIADYYKNVD 44 (506)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (506)
|||.+.-+..++-...+..+..+-+++.=..++++.++|++.+.
T Consensus 3 ~~~~~~~~ip~~l~~lL~~~~~evlr~qP~Di~~Faa~yF~~l~ 46 (50)
T 2kyg_A 3 MGSMSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLR 46 (50)
T ss_dssp CCTTCCCCCCTTHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred ccccchhcCCccHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 56665444333333333333333344444456666777776543
No 433
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=20.52 E-value=4.3e+02 Score=23.07 Aligned_cols=103 Identities=14% Similarity=0.119 Sum_probs=57.9
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHhhcccCCCCeEEEeCCCCchHHHHHHHHh-CCCCCCeEEEecCC----CCCcccCH
Q 048643 159 GVIQGTTCEAILCTLTAARDRVLNKIGRENISKLVVYGSDQTHCALQKAAQIV-GIDLKNFRAIKTTK----SSSYGLSP 233 (506)
Q Consensus 159 g~~t~ggt~a~l~al~~ar~~~~~~~~~~~~~~~~v~~s~~~H~s~~ka~~~~-G~g~~~v~~v~~~~----~~~~~~d~ 233 (506)
-+|-..|.+-.-..+..|.++.... +++ .+|+.| ..-.+-.+++..+ |+ +++.|.... .+...|+.
T Consensus 18 ~YF~~~G~eNT~~tl~la~era~e~----~Ik-~iVVAS-~sG~TA~k~~e~~~~i---~lVvVTh~~GF~~pg~~e~~~ 88 (201)
T 1vp8_A 18 VYFNKPGRENTEETLRLAVERAKEL----GIK-HLVVAS-SYGDTAMKALEMAEGL---EVVVVTYHTGFVREGENTMPP 88 (201)
T ss_dssp EEESSCSGGGHHHHHHHHHHHHHHH----TCC-EEEEEC-SSSHHHHHHHHHCTTC---EEEEEECCTTSSSTTCCSSCH
T ss_pred EEecCCCcccHHHHHHHHHHHHHHc----CCC-EEEEEe-CCChHHHHHHHHhcCC---eEEEEeCcCCCCCCCCCcCCH
Confidence 4566666665656666666654322 223 344444 4556777777766 66 788776422 22457787
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeccC--------CCCCcccChhHHHHHHH
Q 048643 234 DSLLTQINLDVEAGLVPLFLCATIGT--------TAITAVDPLKPLCDVAK 276 (506)
Q Consensus 234 ~~L~~~i~~~~~~g~~p~~Vv~t~gt--------t~tG~idpl~~I~~ia~ 276 (506)
+..++ |++ .| ..++..|+.- +-+|-+.|.+-|++..|
T Consensus 89 e~~~~-L~~---~G--~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR 133 (201)
T 1vp8_A 89 EVEEE-LRK---RG--AKIVRQSHILSGLERSISRKLGGVSRTEAIAEALR 133 (201)
T ss_dssp HHHHH-HHH---TT--CEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHH-HHh---CC--CEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHH
Confidence 65544 433 33 1134444432 23456678888888777
No 434
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=20.35 E-value=3.6e+02 Score=25.21 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=42.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCCCCCcccChhHHHHHHHHhCCEEEeecccccccc
Q 048643 217 NFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 293 (506)
Q Consensus 217 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt~tG~idpl~~I~~ia~~~g~~lhVDaA~gg~~~ 293 (506)
.|+.|-+. ..+.+.|++++......|..++.++ ....+.. .-++-.++.+.|+++|+-++.=...+++.+
T Consensus 132 kir~iGvS-----n~~~~~l~~~~~~~~~~g~~~~~~~-Q~~~~~~-~~~~e~~l~~~~~~~gi~v~a~spL~~G~L 201 (327)
T 1gve_A 132 KFVELGLS-----NYVSWEVAEICTLCKKNGWIMPTVY-QGMYNAI-TRQVETELFPCLRHFGLRFYAFNPLAGGLL 201 (327)
T ss_dssp SEEEEEEE-----SCCHHHHHHHHHHHHHHTCCCEEEE-EEECBTT-BCGGGTTHHHHHHHHTCEEEEECTTGGGGG
T ss_pred ceeEEEec-----CCCHHHHHHHHHHHHHcCCCCeEEE-eccCcce-ecccHHHHHHHHHHcCCeEEEecccccccc
Confidence 58888775 3467788888776555564443332 2222221 112235899999999999987666655543
No 435
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=20.14 E-value=1.2e+02 Score=28.13 Aligned_cols=41 Identities=12% Similarity=0.098 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCCCCeEEEecCCCCCc-ccCHHHHHHHHHHHHhcC
Q 048643 204 LQKAAQIVGIDLKNFRAIKTTKSSSY-GLSPDSLLTQINLDVEAG 247 (506)
Q Consensus 204 ~~ka~~~~G~g~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g 247 (506)
..+.++-+|+ +++++|+.....+ ....+.|++.|+...+.|
T Consensus 37 ~~~~lk~~G~---N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~G 78 (302)
T 1bqc_A 37 AFADIKSHGA---NTVRVVLSNGVRWSKNGPSDVANVISLCKQNR 78 (302)
T ss_dssp HHHHHHHTTC---SEEEEEECCSSSSCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCC---CEEEEEccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 3445556899 9999998632111 112344444554444444
No 436
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=20.01 E-value=3.1e+02 Score=24.29 Aligned_cols=50 Identities=12% Similarity=-0.025 Sum_probs=31.0
Q ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEeccCC
Q 048643 203 ALQKAAQIVGIDLKNFRAIKTTKSSSYGLSPDSLLTQINLDVEAGLVPLFLCATIGTT 260 (506)
Q Consensus 203 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~Vv~t~gtt 260 (506)
...+....++- ++..+++| --|.+.+++.+++..+.-..+-++|-++|..
T Consensus 36 ~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 85 (248)
T 3asu_A 36 RLQELKDELGD---NLYIAQLD-----VRNRAAIEEMLASLPAEWCNIDILVNNAGLA 85 (248)
T ss_dssp HHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHTSCTTTCCCCEEEECCCCC
T ss_pred HHHHHHHHhcC---ceEEEEcC-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 34445555554 78888876 3478888888876443322345677777754
Done!