BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048648
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 86/142 (60%), Gaps = 18/142 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQQ P P D++I L NA+I G T +DGG FKLTL+FT++YP KPP
Sbjct: 10 MRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV AI +IQ +L DPN S AN +AA M
Sbjct: 70 VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 129
Query: 160 LTGGRIDYYKKAQRIVELSWKA 181
+ + +Y +K + +VE SW A
Sbjct: 130 YSENKREYNRKVREVVEQSWTA 151
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 18/142 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQQ P P D++IML NA+I G T +DGG FKL+L+F+++YP KPP
Sbjct: 10 MRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV AI +IQ +L DPN S AN +AA M
Sbjct: 70 VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 129
Query: 160 LTGGRIDYYKKAQRIVELSWKA 181
+ + +Y ++ + +VE SW A
Sbjct: 130 FSESKREYNRRVREVVEQSWTA 151
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 18/142 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQQ P P D++IML NA+I G T +DGG FKL+L+F+++YP KPP
Sbjct: 10 MRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV AI +IQ +L DPN S AN +AA M
Sbjct: 70 VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 129
Query: 160 LTGGRIDYYKKAQRIVELSWKA 181
+ + +Y ++ + +VE SW A
Sbjct: 130 YSESKREYNRRVRDVVEQSWTA 151
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 85/141 (60%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ+ P P +++IM+ NA+I G GT F+ G FKLT++FT+EYP KPP
Sbjct: 10 MRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV +I +IQ +L +PN S AN QAA +
Sbjct: 70 VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
+ +Y K+ IVE SW+
Sbjct: 130 YQENKREYEKRVSAIVEQSWR 150
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 85/141 (60%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ+ P P +++IM+ NA+I G GT F+ G FKLT++FT+EYP KPP
Sbjct: 10 MRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV +I +IQ +L +PN S AN QAA +
Sbjct: 70 VRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
+ +Y K+ IVE SW+
Sbjct: 130 YQENKREYEKRVSAIVEQSWR 150
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 86/142 (60%), Gaps = 18/142 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ P P D++IML NA+I G T +DGG FKL+L+F+++YP KPP
Sbjct: 10 MRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV AI +IQ +L DPN S AN +AA M
Sbjct: 70 VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM 129
Query: 160 LTGGRIDYYKKAQRIVELSWKA 181
+ + +Y ++ + +VE SW A
Sbjct: 130 FSENKREYNRRVREVVEQSWTA 151
>sp|P23566|UBC2_SCHPO Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rhp6 PE=1 SV=3
Length = 151
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 18/142 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+QQ P P D++ML NA+I+G T F+ G FKL L F ++YP KPP+
Sbjct: 10 MRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPL 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV AI +IQ +L DPN S AN +AA +
Sbjct: 70 VKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSWKA 181
+ +Y ++ ++ VE SW++
Sbjct: 130 HRENKKEYVRRVRKTVEDSWES 151
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ+ P P +++IM NA+I G GT F+ G FKL ++F++EYP KPP
Sbjct: 10 MRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV +I +IQ +L +PN S AN QAA +
Sbjct: 70 VRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ +Y K+ IVE SW
Sbjct: 130 YQENKREYEKRVSAIVEQSW 149
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ+ P P +++IM NA+I G GT F+ G FKL ++F++EYP KPP
Sbjct: 10 MRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV +I +IQ +L +PN S AN QAA +
Sbjct: 70 VRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ +Y K+ IVE SW
Sbjct: 130 YQENKREYEKRVSAIVEQSW 149
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ+ P P +++IM NA+I G GT F+ G FKL ++F++EYP KPP
Sbjct: 10 MRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV +I +IQ +L +PN S AN QAA +
Sbjct: 70 VRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ +Y K+ IVE SW
Sbjct: 130 YQENKREYEKRVSAIVEQSW 149
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ+ P P +++IM NA+I G GT F+ G FKL ++F++EYP KPP
Sbjct: 10 MRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV +I +IQ +L +PN S AN QAA +
Sbjct: 70 VRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ +Y K+ IVE SW
Sbjct: 130 YQENKREYEKRVSAIVEQSW 149
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ+ P P +++IM NA+I G GT F+ G FKL ++F++EYP KPP
Sbjct: 10 MRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV +I +IQ +L +PN S AN QAA +
Sbjct: 70 VRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ +Y K+ IVE SW
Sbjct: 130 YQENKREYEKRVSAIVEQSW 149
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 82/140 (58%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD K+LQ+ P P +D+I+ AII G T F+ G FKL+L+FT+EYP KPP
Sbjct: 10 MRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV AI +IQ +L +PN S AN AA +
Sbjct: 70 VKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
R +Y K+ Q+IVE SW
Sbjct: 130 YQENRREYEKRVQQIVEQSW 149
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 84/143 (58%), Gaps = 18/143 (12%)
Query: 55 QQWMRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVK 108
++ MRD KRLQ+ P P D++IM+ NA+I G T F+ G FKLT++FT+EYP K
Sbjct: 7 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 66
Query: 109 PPVVPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQA 156
PP V FVS +FH N D+ +W+ YDV AI +IQ +L DPN S AN A
Sbjct: 67 PPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTA 126
Query: 157 ATMLTGGRIDYYKKAQRIVELSW 179
A + R +Y K+ + VE S+
Sbjct: 127 AQLYKENRREYEKRVKACVEQSF 149
>sp|Q6BU36|UBC2_DEBHA Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=UBC2 PE=3 SV=1
Length = 168
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+QQ AP G D++M NA+I+G T F+ G F+L L+F ++YP KPP
Sbjct: 10 MRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPS 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV +I +IQ +L DPN+ S AN +AA +
Sbjct: 70 VKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
R Y K+ + VE SW
Sbjct: 130 YKDHRSQYIKRVRETVENSW 149
>sp|Q75EB8|UBC2_ASHGO Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC2
PE=3 SV=1
Length = 170
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+++ APPG D++M+ NA+I+G T ++ G F+L L+F +EYP KPP
Sbjct: 10 MRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPH 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W YDV +I +IQ + DPN S AN +AAT+
Sbjct: 70 VKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
+ Y K+ + VE SW+
Sbjct: 130 FKDHKSQYVKRVKETVEKSWE 150
>sp|P06104|UBC2_YEAST Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD6 PE=1 SV=1
Length = 172
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+++ APPG D++M+ NA+I+G T ++ G F+L L+F +EYP KPP
Sbjct: 10 MRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPH 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W YDV +I +IQ + DPN S AN +AAT+
Sbjct: 70 VKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
+ Y K+ + VE SW+
Sbjct: 130 FKDHKSQYVKRVKETVEKSWE 150
>sp|Q6CUD9|UBC2_KLULA Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=UBC2 PE=3 SV=1
Length = 164
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+++ +PPG D++M+ NA+I+G T ++ G F+L L+F +EYP KPP
Sbjct: 10 MRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPH 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W YDV +I +IQ + DPN S AN +AAT+
Sbjct: 70 VKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ Y K+ + VE SW
Sbjct: 130 FQDHKSQYVKRVKETVEKSW 149
>sp|P52493|UBC2_NEUCR Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=mus-8 PE=3 SV=3
Length = 151
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+Q P P D++M NA+I+G T F+ G F+L + F ++YP KPP
Sbjct: 10 MRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPS 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV A+ +IQ +L DPN S AN +A+ +
Sbjct: 70 VKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
R +Y+K+ + VE SW+
Sbjct: 130 YKDNRKEYHKRVRETVEKSWE 150
>sp|P78717|UBC2_NECHA Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2
PE=3 SV=1
Length = 151
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+Q P P D++M NA+I+G T F+ G F+L ++F ++YP KPP
Sbjct: 10 MRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQ 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV A+ +IQ +L DPN S AN +A+ +
Sbjct: 70 VKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
R +Y K+ + VE SW+
Sbjct: 130 YKDNRKEYTKRVRETVEKSWE 150
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=UBC2 PE=3 SV=1
Length = 169
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 18/143 (12%)
Query: 55 QQWMRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVK 108
++ +RD KRL AP P D+IM+ NA+I G T F+ G F+LTL FT YP K
Sbjct: 7 RRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNK 66
Query: 109 PPVVPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQA 156
PP V F+S MFH N D+ +W+ YDV AI ++Q +L DPN S AN A
Sbjct: 67 PPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDA 126
Query: 157 ATMLTGGRIDYYKKAQRIVELSW 179
A + +Y ++ ++ VELSW
Sbjct: 127 AQLFKENLKEYERRVKKTVELSW 149
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 18/143 (12%)
Query: 55 QQWMRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVK 108
++ +RD KRL AP P D+IM+ NA+I G T F+ G F+LTL FT YP K
Sbjct: 7 RRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNK 66
Query: 109 PPVVPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQA 156
PP V F+S MFH N D+ +W+ YDV AI ++Q +L DPN S AN A
Sbjct: 67 PPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDA 126
Query: 157 ATMLTGGRIDYYKKAQRIVELSW 179
A + +Y ++ ++ VELSW
Sbjct: 127 AQLFKENLKEYERRVKKTVELSW 149
>sp|Q58FS2|UBC2_TRIHA Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2
PE=2 SV=1
Length = 151
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+Q P G D++M NA+I+G T F+ G F+L ++F ++YP KPP
Sbjct: 10 MRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQ 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV A+ +IQ +L DPN S AN +A+ +
Sbjct: 70 VKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
R +Y K+ + VE SW+
Sbjct: 130 YKDNRREYIKRVRETVERSWE 150
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 83/140 (59%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
M D KRLQ+ P P D++IM NA+I G T +DGG FKLTL FT++YP KPP+
Sbjct: 10 MWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPI 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV A+ +IQ +L DPN S AN +AA +
Sbjct: 70 VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ + +Y +K IVE S+
Sbjct: 130 FSENKREYNRKVIEIVEQSY 149
>sp|Q6C093|UBC2_YARLI Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=UBC2 PE=3 SV=1
Length = 151
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+QQ P P D+++ NA+I+G T F+ G F++ L+F ++YP KPP
Sbjct: 10 MRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPA 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V FVS MFH N D+ +W+ YDV AI ++Q +L DPN S AN +A+ +
Sbjct: 70 VKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASML 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
R Y K+ + VE SW
Sbjct: 130 YKDHRQQYEKRVRDTVEASW 149
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+++ +PPG D++M+ NA+I+G T ++ G F+L L+F ++YP KPP
Sbjct: 10 MRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPH 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W YDV +I +IQ + DPN S AN +AAT+
Sbjct: 70 VKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
+ Y K+ + VE SW
Sbjct: 130 FKDHKSQYIKRVKETVEKSW 149
>sp|Q96UP5|UBC2_EMENI Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=uvsJ PE=3 SV=1
Length = 151
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+Q P G D++M NA+I+G T F+ G F+L + F ++YP KPP
Sbjct: 10 MRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPG 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV AI +IQ +L DPN S AN +A+ +
Sbjct: 70 VKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
R +Y K+ + VE SW+
Sbjct: 130 YRDNRKEYIKRVRETVEKSWE 150
>sp|Q4WLA7|UBC2_ASPFU Ubiquitin-conjugating enzyme E2 2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ubc2
PE=3 SV=1
Length = 151
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 18/141 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+Q P G D++M NA+I+G T F+ G F+L + F ++YP KPP
Sbjct: 10 MRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPG 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV AI +IQ +L DPN S AN +A+ +
Sbjct: 70 VKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNL 129
Query: 160 LTGGRIDYYKKAQRIVELSWK 180
R +Y K+ + VE SW+
Sbjct: 130 YKDNRKEYIKRVRETVEKSWE 150
>sp|O74201|UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=UBC2 PE=2 SV=1
Length = 179
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 18/140 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KR+QQ P G D++M NA+I+G T F+ G F+L L F ++YP KPP
Sbjct: 10 MRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQ 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YDV +I ++Q +L DPN+ S AN +AA +
Sbjct: 70 VKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANL 129
Query: 160 LTGGRIDYYKKAQRIVELSW 179
R Y K+ + VE SW
Sbjct: 130 YKDHRSLYVKRVRETVENSW 149
>sp|Q4PFA5|UBC2_USTMA Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=UBC2 PE=3 SV=1
Length = 185
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 18/143 (12%)
Query: 55 QQWMRDLKRLQQGAP------PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVK 108
++ +RD KRL P P D++M+ NA+I G T F+ G FKL L F + YP K
Sbjct: 7 KRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNK 66
Query: 109 PPVVPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQA 156
PP V F+S MFH N D+ +W+ YDV AI +IQ +L DPN S AN +A
Sbjct: 67 PPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEA 126
Query: 157 ATMLTGGRIDYYKKAQRIVELSW 179
A++ +Y ++ + VE SW
Sbjct: 127 ASLYRENMKEYVRRVKATVEASW 149
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 18/142 (12%)
Query: 58 MRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPV 111
MRD KRLQ P G +++I++ A+I G ++++G FKL+L+F++EYP P
Sbjct: 10 MRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPT 69
Query: 112 VPFVSGMFHRN---------DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATM 159
V F+S MFH N D+ +W+ YD+ AI +IQ +L DPN S AN ++A +
Sbjct: 70 VKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARL 129
Query: 160 LTGGRIDYYKKAQRIVELSWKA 181
+ +Y +K + IVE SW +
Sbjct: 130 FRENKREYNRKVKEIVEQSWSS 151
>sp|Q8L7T3|UBC20_ARATH Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20
PE=2 SV=1
Length = 180
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Query: 70 PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPVVPFVSGMFHRN------- 122
P +D+I I G T+F+G ++L+L F+ +YP KPP V F + FH N
Sbjct: 59 PEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNI 118
Query: 123 --DL---KWNSDYDVVAIFATIQLMLGDPNLYSAANQQAATMLTGGRIDYYKKAQRI 174
D+ KW+S YDV I +IQ +LG+PN+ S N QAA L + +Y K +++
Sbjct: 119 CLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAA-QLWSNQEEYRKMVEKL 174
>sp|Q9LJZ5|UBC19_ARATH Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana GN=UBC19
PE=1 SV=1
Length = 181
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 26/139 (18%)
Query: 61 LKRLQQ-------GAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
LKRLQ GA PG +D+I I G T+F+G ++L+L F+ +YP
Sbjct: 38 LKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPF 97
Query: 108 KPPVVPFVSGMFHRN-DL-----------KWNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
K P V F + FH N DL KW+S YDV I +IQ +LG+PN+ S N Q
Sbjct: 98 KSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQ 157
Query: 156 AATMLTGGRIDYYKKAQRI 174
AA L + +Y K +++
Sbjct: 158 AA-QLWSNQEEYRKMVEKL 175
>sp|B4R6G1|UBE2S_DROSI Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343
PE=3 SV=1
Length = 209
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + GIF++ L K++P+
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPL 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|B4IF39|UBE2S_DROSE Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia
GN=GM13299 PE=3 SV=1
Length = 209
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + GIF++ L K++P+
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPL 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|Q9VX25|UBE2S_DROME Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster
GN=CG8188 PE=1 SV=2
Length = 209
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + GIF++ L K++P+
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPL 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|A7SE05|UBE2S_NEMVE Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis
GN=v1g237158 PE=3 SV=1
Length = 204
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q R++ L P G D+DI A I G GT ++GGIFK+ L K++P
Sbjct: 16 IKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLVLGKDFPA 75
Query: 108 KPPVVPFVSGMFHRNDLK------------WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N K W D + + T++ +L PN SA N++
Sbjct: 76 APPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVELSWK 180
A +L DY K+A+ E+ K
Sbjct: 136 AGKLLLERYDDYSKRAKMFTEIHAK 160
>sp|B3MQV3|UBE2S_DROAN Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae
GN=GF21161 PE=3 SV=1
Length = 209
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + GIF++ L K++P
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|B4Q2J2|UBE2S_DROYA Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576
PE=3 SV=1
Length = 209
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + G+F++ L K++P
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|B5DKM4|UBE2S_DROPS Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura
pseudoobscura GN=GA22810 PE=3 SV=1
Length = 209
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + GIF++ L +K++P
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|B4H9W2|UBE2S_DROPE Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis
GN=GL16001 PE=3 SV=1
Length = 209
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + GIF++ L +K++P
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|B3NWW9|UBE2S_DROER Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165
PE=3 SV=1
Length = 209
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + G+F++ L K++P
Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|B4N208|UBE2S_DROWI Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni
GN=GK16201 PE=3 SV=1
Length = 208
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q MR+L+ ++ P G + D+ A+I G GT + G+F++ L +K++P
Sbjct: 16 IRQVMRELQEMENTPPEGIKVLINESDVTDIQALIDGPAGTPYAIGVFRVKLTLSKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|Q95044|UBE2C_SPISO Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C
PE=1 SV=1
Length = 177
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 53 QLQQWMRDLKRLQQGAP-----PGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
+LQQ +R L L G P P D++ A + G T+++ +KLTL+F +YP
Sbjct: 34 RLQQELRTL--LMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPY 91
Query: 108 KPPVVPFVSGMFHRN------------DLKWNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
KPPVV F + +H N W + YDV I ++Q +LG+PN S N Q
Sbjct: 92 KPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQ 151
Query: 156 AATMLTGGRIDYYK 169
AA M + + +Y K
Sbjct: 152 AADMWS-NQTEYKK 164
>sp|Q95LM1|UBE2U_MACFA Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U
PE=2 SV=1
Length = 322
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 21/124 (16%)
Query: 59 RDLKRLQQG------APPGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPVV 112
RD L++ A P +D+M I GL +++ G +F+LT+ FT EY PPVV
Sbjct: 11 RDFYDLKENNYKGITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVV 70
Query: 113 PFVSGMFH---------------RNDLKWNSDYDVVAIFATIQLMLGDPNLYSAANQQAA 157
FV+ FH N KWN++Y + +I +Q+ML +P L + N +AA
Sbjct: 71 KFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAA 130
Query: 158 TMLT 161
+LT
Sbjct: 131 RILT 134
>sp|O00102|UBC7_SCHPO Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc7 PE=2 SV=2
Length = 166
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 32/154 (20%)
Query: 54 LQQWMRDLKRLQQGAPPG-------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYP 106
L++ M++ K L + P G +DD + +I G GT F+GG++ TLKF +YP
Sbjct: 7 LRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYP 66
Query: 107 VKPPVVPFVSGMFHRN-------------------------DLKWNSDYDVVAIFATIQL 141
+ PP + F FH N +W+ V I ++
Sbjct: 67 LGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMS 126
Query: 142 MLGDPNLYSAANQQAATMLTGGRIDYYKKAQRIV 175
ML +PN S AN A M R +Y + +R+
Sbjct: 127 MLAEPNDESGANIDACKMWREDREEYCRVVRRLA 160
>sp|B4L7V4|UBE2S_DROMO Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis
GN=GI11085 PE=3 SV=1
Length = 206
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 18/147 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q M++L+ ++ P G + D+ A+I G GT + GIF++ L +K++P
Sbjct: 16 IRQVMKELQDMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVELSWKAI 182
A ML DY ++A+ + E+ + +
Sbjct: 136 AGKMLLERYDDYSQRARMMTEIHAQPV 162
>sp|B4JKB7|UBE2S_DROGR Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi
GN=GH12079 PE=3 SV=1
Length = 208
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 54 LQQWMRDLKRLQQGAPPG------DDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPV 107
++Q M++L+ ++ P G + D+ A+I G GT + GIF++ L +K++P
Sbjct: 16 IRQVMKELQDMESTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQ 75
Query: 108 KPPVVPFVSGMFHR----------NDLK--WNSDYDVVAIFATIQLMLGDPNLYSAANQQ 155
PP F++ +FH N LK W D + I TI+ +L PN SA N++
Sbjct: 76 TPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEE 135
Query: 156 AATMLTGGRIDYYKKAQRIVEL 177
A ML DY ++A+ + E+
Sbjct: 136 AGKMLLERYDDYSQRARMMTEI 157
>sp|Q5VVX9|UBE2U_HUMAN Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1
SV=1
Length = 321
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 21/123 (17%)
Query: 59 RDLKRLQQG------APPGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEYPVKPPVV 112
RD L++ A P +D+M I GL +++ G +F+LT+ FT EY PPVV
Sbjct: 11 RDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVV 70
Query: 113 PFVSGMFH---------------RNDLKWNSDYDVVAIFATIQLMLGDPNLYSAANQQAA 157
F++ FH N KWN++Y + +I +Q+ML +P L + N +AA
Sbjct: 71 KFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAA 130
Query: 158 TML 160
+L
Sbjct: 131 RIL 133
>sp|P52492|UBC11_YEAST Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC11 PE=1 SV=1
Length = 156
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 46 VGGGLKCQLQQWMRDLKRLQQGAPPGDDDIMLRNAIIVGLGGTLFDGGIFKLTLKFTKEY 105
V L+ +L Q + P D+D+ I G T + G FK++LKF + Y
Sbjct: 9 VTKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNY 68
Query: 106 PVKPPVVPFVSGMFHRN------------DLKWNSDYDVVAIFATIQLMLGDPNLYSAAN 153
P PP++ F+S M+H N KW++ Y+V I ++Q +LG+PN S N
Sbjct: 69 PFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLN 128
Query: 154 QQAATMLTGGRIDYYKKAQRIVE 176
AA + +Y KK E
Sbjct: 129 AVAAELWDADMEEYRKKVLACYE 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,126,643
Number of Sequences: 539616
Number of extensions: 2961539
Number of successful extensions: 6453
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 6050
Number of HSP's gapped (non-prelim): 301
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)