Your job contains 1 sequence.
>048652
MMEGKGCSSSTKKAVGFTGHTVFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVFP
LLEETRMQLRSGLEAMRRAPYAEVIAFEELKPYGANRYGIEVDYWRNTICNSGKEPYKTL
PGDILVLADFKPEKVSDLLRVGRMWTFVSVTMVPDDEVENKNKKKNYYEVKARNNLQVHD
GTKKSFFFIYLTNILPSKRIWNSLHMCGNWKVITQVLGTDSVVEESCELCSLQRKGIWDE
KFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKC
RTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEE
IYLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKK
CRKETEGSKGECKPFLEYVRESFNCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSL
LDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNS
LDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESES
TIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMH
PSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSCRNM
VEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSV
DGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW
GTLVCDAKARQCFFKADEDRNLAKARLEVSKESVEIDAESLTSRSQRGKLCYKPKYEKTT
LCYDKDGETYWEGRSTATDRKAAADPMCSSNPKEVKFNLQEAAEIFAAIGMPDSAVRCFN
DLEKYERAGRFDELMMLEEGSGNFMEAANTAVLGGDIFLATDLLQKAGNFREASKLVLNF
VFSNSLWSPGSRGWPLKQFTQEEELLQKAKSLAKNDSNQFYEFVCAEADILSNDQSNLLM
MNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYSDDRICKSQVS
IETFLYFWNCWKDKIVKIFEYLGCLRMQQDVDDYRSYEDFCLSYFSVWKHCSNLDTTYLL
LKSDAYWVRELNNMYVQKRGQLVFIDLHQLVSAAQSYWSTELLSVGIKVLDKLEALHEQS
IKNSVSVLCQSKCLSYIYDVAKFLLDSKFLYRHWDDKTLQKFVELSTEEFFHCIFPLDWR
ESLSKDMISLRQTEVCRSILEEIVSRYVTSKSKLSYGQIGRIAVMILGSGKLHNGFYRKV
VG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048652
(1382 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 966 6.2e-157 3
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 1442 8.3e-151 2
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 913 1.2e-147 3
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 895 4.7e-140 3
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 908 2.0e-135 2
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 868 1.0e-134 2
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 831 5.4e-124 3
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 1144 4.4e-116 1
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 454 9.5e-48 3
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 485 9.6e-48 4
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 476 1.9e-47 3
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 464 1.0e-42 4
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 411 1.4e-41 2
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 442 1.7e-41 3
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 447 4.0e-41 3
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 451 5.7e-41 4
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 458 1.3e-40 4
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 456 6.0e-40 3
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 416 1.2e-39 3
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 416 1.2e-39 3
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 410 1.9e-39 3
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 439 2.7e-39 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 403 4.1e-39 2
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 460 1.1e-38 3
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 443 3.6e-38 3
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 389 3.9e-38 2
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 389 5.9e-38 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 387 7.3e-37 2
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 408 1.6e-36 4
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 431 4.1e-36 1
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 384 1.9e-35 2
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 378 2.8e-35 2
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 377 3.0e-35 2
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 381 3.9e-35 2
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 381 4.0e-35 2
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 381 4.0e-35 2
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 381 4.0e-35 2
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 381 4.1e-35 2
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 378 7.8e-35 2
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 375 1.2e-33 3
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 350 3.0e-33 2
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 365 7.1e-33 3
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 353 1.4e-32 2
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 351 1.2e-31 2
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 354 2.1e-31 3
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 353 2.1e-31 3
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 342 1.0e-29 3
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 340 1.6e-29 3
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 341 5.5e-28 3
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 344 8.1e-28 2
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 297 3.9e-27 2
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 344 4.7e-27 2
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 209 6.9e-27 3
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 338 1.3e-26 2
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 288 2.5e-26 2
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 288 2.7e-26 2
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 285 7.5e-26 2
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 341 8.8e-26 3
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 338 1.6e-25 2
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 325 3.5e-25 1
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 278 3.8e-25 2
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 278 3.8e-25 2
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 253 4.3e-25 3
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 278 4.9e-25 2
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 281 5.8e-25 2
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 276 7.9e-25 2
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 287 1.0e-24 2
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 277 1.2e-24 2
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 273 1.3e-24 2
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 278 3.4e-24 3
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 291 5.1e-24 2
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 183 1.5e-23 2
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 190 1.5e-23 3
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 335 1.7e-23 4
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 335 1.7e-23 4
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 273 4.1e-23 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 273 4.1e-23 2
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 267 3.3e-22 3
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 255 2.6e-19 3
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 276 3.1e-19 3
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 240 1.6e-18 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 259 1.8e-18 2
WB|WBGene00014208 - symbol:ZK1067.2 species:6239 "Caenorh... 259 4.0e-18 2
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 257 7.8e-18 2
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 179 1.7e-17 3
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 249 1.7e-17 2
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 246 9.4e-17 3
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 186 1.3e-16 3
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 213 1.6e-16 2
MGI|MGI:1891384 - symbol:Mov10l1 "Moloney leukemia virus ... 181 1.6e-16 3
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 174 2.0e-16 4
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 258 2.6e-16 3
ZFIN|ZDB-GENE-060526-371 - symbol:mov10b.2 "Moloney leuke... 224 5.5e-16 2
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 181 7.3e-16 3
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 221 7.9e-16 2
MGI|MGI:2138982 - symbol:Znfx1 "zinc finger, NFX1-type co... 247 1.2e-15 2
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 246 1.8e-15 2
UNIPROTKB|Q9P2E3 - symbol:ZNFX1 "NFX1-type zinc finger-co... 248 1.9e-15 2
POMBASE|SPCC1739.03 - symbol:hrr1 "Helicase Required for ... 231 2.4e-15 3
FB|FBgn0033889 - symbol:CG6701 species:7227 "Drosophila m... 217 3.3e-15 3
WARNING: Descriptions of 70 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 966 (345.1 bits), Expect = 6.2e-157, Sum P(3) = 6.2e-157
Identities = 201/360 (55%), Positives = 258/360 (71%)
Query: 526 RRSECLSVLRNLWNSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLN 585
R +CL +L ++ S+ LP SK L+ C A L F TASSS +LH P+
Sbjct: 500 RTQDCLEMLTSISMSI---KLPDFISKFELQKLCLDNAYLLFCTASSSARLHMSS--PIQ 554
Query: 586 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTL 645
LVIDEAAQLKE ES IPLQL G+ HA+LIGDE QLPAM++S I+ A GRSLFERL L
Sbjct: 555 LLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERLVL 614
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINI 705
L H+K LL++QYRMHPSIS+FPN +FY +ILD +V+ +SYEK +LP +GPY+FINI
Sbjct: 615 LGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINI 674
Query: 706 IGGREEFIY-HSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIG 764
GRE+F +S +N+VEVSVV +I+ KLY + + +S+GV+SPY AQV AI+++IG
Sbjct: 675 AYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERIG 734
Query: 765 SEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCL 824
+Y + FTV V+SVDGFQGGEEDIIIISTVR N G+IGF+SN QR NVALTRAR+CL
Sbjct: 735 EKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCL 794
Query: 825 WILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSKESVEIDAESLTSR 884
WILGNE TL ++ S+W LV DAKAR CF A+ED +LA+ +E S +++ D L ++
Sbjct: 795 WILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQC-IERSTTALD-DLNKLQNK 852
Score = 564 (203.6 bits), Expect = 6.2e-157, Sum P(3) = 6.2e-157
Identities = 134/389 (34%), Positives = 210/389 (53%)
Query: 22 VFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP- 80
VFSWSL ++ N +L++ QV KIP +F S K+YF SFV P++EET L S + +RRA
Sbjct: 26 VFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTIRRAQA 85
Query: 81 --YAEVIAFEELKPYGANRYGIEVDYWRNTICNSGKEPYKTLPGDILVLADFKPEKVSDL 138
+ E+ ++ KP Y + + + G+ + D++ + D +P ++ DL
Sbjct: 86 FKFWEIKPGKDFKPPRDLYYEVTLQMTNEYMTKGGQNLLEV--NDLIAVTDKRPIRIDDL 143
Query: 139 LRVGRMWTFVSVTMVPDDXXXXXXXXXXX-----XXXXARNNLQVHDGTKKS--FFFIYL 191
+ V V ++ + + + G +KS FF + L
Sbjct: 144 RFSHEPYLLALVCGVNENNPHLITILASKPIIFDDDDDIKTSSKRGKGERKSLSFFGVNL 203
Query: 192 TNILPSKRIWNSLHMC---GNWKVITQVLGTDSVVEE-SCELCSLQRKGIWDEKFGPSLS 247
N++ + RIW +LH GN K+I++VL +++ V+ SC C + + + L
Sbjct: 204 INMMTNIRIWTALHPNPEGGNLKLISRVLQSNNEVDGGSCVSCKENSESVVSDYSARMLR 263
Query: 248 S-TLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACT 306
S LN Q A+ CL C+H + ++L WGPPGTGKTKT S+LL + L+++CRTL C
Sbjct: 264 SFKLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCA 323
Query: 307 PTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFE--EIYLD 364
PTN+A+ E+ SR ++LV ES + D LGDI+LFGNK+R+K++ + +++L+
Sbjct: 324 PTNIAVLEVCSRLVKLVSESLRFDGYG------LGDIVLFGNKERMKIDDREDLFDVFLE 377
Query: 365 YRVKRLMECFAPLSGWRHCFSSMIDLLED 393
YRV L CF L+GWR + MI LL D
Sbjct: 378 YRVDELYRCFMALTGWRANVNRMICLLSD 406
Score = 43 (20.2 bits), Expect = 6.2e-157, Sum P(3) = 6.2e-157
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 435 FLEYVRESFNCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLL 481
F ++V E + L + C HLP + +S + M +LL
Sbjct: 424 FKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEKMNQTNNLL 470
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 1442 (512.7 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 356/909 (39%), Positives = 501/909 (55%)
Query: 22 VFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 81
V SWSL+ + N L+K QVEKIP F+S YF +F+ PL+EET L S + + +AP
Sbjct: 15 VLSWSLDEVLNVDLYKGQVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQAPV 74
Query: 82 AEVIAFEELKPYGANRYGIEVDYWRNTICNSGKEPYKTLPGDILVLADFKPEKVSDLLRV 141
E+ + Y + ++ Y S + K +P D++ L D +P V D +
Sbjct: 75 VEISYIMQTAEY---KLPNDLFYKVRLSGISNEASTKLMPRDLISLTDQRPNHV-DGFNI 130
Query: 142 GRMWTFVSVTMVPDDXXXXXXXXXXXXXXXARNNLQVHDGTKKSFFFIYLTNILPSKRIW 201
V++ D + + + K+ F I+L N+ + RIW
Sbjct: 131 SSEPYIVALVCKVDPDRPNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLTTNIRIW 190
Query: 202 NSLHMCG---NWKVITQVLGTDSVVEESCELCSLQRKGIWDEKFGPSLSSTLNEPQVGAV 258
N+LH N +I++VL +S E C C LQ +G + P LN Q A+
Sbjct: 191 NALHPGDEGVNLNLISRVLRRNSEDEGFCIQC-LQ-EG--SDGLAPRRFLKLNPSQEDAI 246
Query: 259 FACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASR 318
CL C H + V L WGPPGTGKTKT S+LLF+LL KCRTL C PTNV++ E+ASR
Sbjct: 247 LNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTNVSVLEVASR 306
Query: 319 ALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFE--EIYLDYRVKRLMECFAP 376
L+LV S K + LGD++LFGN +R+K+ + I++D RV +L CF P
Sbjct: 307 VLKLVSGSLKIGNYG------LGDVVLFGNDERMKIKDRKDLVNIFIDERVDKLYPCFMP 360
Query: 377 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRKETEGSKG------ 430
GW+ MI LLED QY++Y+E L + + RK E ++
Sbjct: 361 FYGWKATIDGMIRLLEDPKGQYNLYLENLARANNVKRKDTGSVFKRKGNEQNENIVEQVS 420
Query: 431 ECKP--FLEYVRESFNCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLLDSFRSLL 488
+ +P F +Y+ E F+ L CTHLP +S + M L+ L
Sbjct: 421 DTRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTALLSSQAATRMYEAIDLVRDVTILA 480
Query: 489 FQKNVVSEELEK-LFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL-NL 546
V E ++ L + D R+ Q + L +LR S+ E+ L
Sbjct: 481 ILDGVTGEGVKSVLIPNGEGSD--------RFSSQHVTVEDDYLKLLR----SIPEIFPL 528
Query: 547 PCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQL 606
P + + L+K+ C A L FSTAS S +L++ P+ LVIDEAAQLKE ES+IP+QL
Sbjct: 529 PAVSDRHLIKELCLGHACLLFSTASCSARLYTGT--PIQLLVIDEAAQLKECESSIPMQL 586
Query: 607 AGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLF 666
G+ H +L+GDE QLPAMVES+I+ A FGRSLFERL LL H K++L+IQYRMH SIS F
Sbjct: 587 PGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCSISSF 646
Query: 667 PNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIY---HSCRNMVEV 723
PN + Y +ILD V+ ++Y K YLPG +GPY+FINI GREE+ S +N VEV
Sbjct: 647 PNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEV 706
Query: 724 SVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDG--FTVKVKSVD 781
VV I+ L + +K +++GV+SPY AQV+AI++KI G F++++++VD
Sbjct: 707 VVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVD 766
Query: 782 GFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWG 841
GFQGGEEDIII+STVR N G +GF+ N +R NV LTRAR CLWILGNE TL++S+S+W
Sbjct: 767 GFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWR 826
Query: 842 TLVCDAKARQCFFKADEDRNLAKARLEVSKESVEIDAESLTSRSQRGKLCYKPKYEKTTL 901
L+ DAK R CF A ED +LA+A ++ ++E L + + KLC+ +++K +
Sbjct: 827 NLIQDAKERGCFHSAGEDESLAQA---IASTNIEF--RPLNN--SKWKLCFSDEFKKY-V 878
Query: 902 CYDKDGETY 910
K+ ETY
Sbjct: 879 GEIKNPETY 887
Score = 51 (23.0 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 1031 SRGWPLKQFTQEEELLQKAKSLAKNDSNQFYEFVCAEADILSND 1074
S+GW ++ T+ E L+ ++ L ++ + + A DIL D
Sbjct: 898 SQGWLKEEETERENLVSSSQLLKQSKIDDVLRIIWA-VDILKED 940
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 913 (326.5 bits), Expect = 1.2e-147, Sum P(3) = 1.2e-147
Identities = 184/364 (50%), Positives = 245/364 (67%)
Query: 529 ECLSVLRNLWNSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLV 588
+CL LR L + +P + ++ FC + A + TAS + +++ + + LV
Sbjct: 475 DCLKALRLLPKRFE---IPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLV 531
Query: 589 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNH 648
+DEAAQLKE ES LQL G+ HA+LIGDE QLPAMV +++ + A FGRSLFERL LL H
Sbjct: 532 VDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGH 591
Query: 649 SKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGG 708
+KHLLD+QYRMHPSIS FPN +FY +I D NVK Y+K +L G FG ++FIN+ G
Sbjct: 592 NKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRG 651
Query: 709 REEF-IYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEY 767
+EEF HS +NMVEV+VV +I+ L+K + VS+GVVSPY Q+ AI++KIG +Y
Sbjct: 652 KEEFGDGHSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKY 711
Query: 768 ENKDG--FTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLW 825
+ G F + V+SVDGFQGGEEDIIIISTVR N+ G +GF++N QR NVALTRARHCLW
Sbjct: 712 SSLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLW 771
Query: 826 ILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSKESVEIDAESLTSRS 885
++GNE TL S SIW TL+ +++ R CF+ A ++ NL A E E V SL+ R+
Sbjct: 772 VIGNETTLALSGSIWATLISESRTRGCFYDATDEMNLRNAMNEALLEDVSSSLGSLSIRN 831
Query: 886 QRGK 889
G+
Sbjct: 832 GHGR 835
Score = 438 (159.2 bits), Expect = 1.2e-147, Sum P(3) = 1.2e-147
Identities = 131/388 (33%), Positives = 205/388 (52%)
Query: 187 FFIYLTNILPSKRIWNSLHMCGNWKVITQVLGTDSVVEESCELCSLQRKGIWD-EKFGPS 245
F ++L + + RIWN+LH N I+ + T SV++ + K + D F
Sbjct: 161 FGVFLMTLTTNTRIWNALH---NEAAISTL--TKSVLQANTVNNVFVLKMMGDLTLFLDI 215
Query: 246 LSST-LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLA 304
+ ST LN Q A+ CL +C HK+ V+L WGPPGTGKTKTV+ LLF+LL+++C+T+
Sbjct: 216 IRSTKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVV 275
Query: 305 CTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFE---EI 361
C PTN AI ++ASR L L KE+ S N T LG+I+L GN+DR+ ++ ++
Sbjct: 276 CAPTNTAIVQVASRLLSLFKEN--STSENAT--YRLGNIILSGNRDRMGIHKNDHVLLDV 331
Query: 362 YLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKC 421
+LD R+ +L + F+P SGW S+I LE+ +Y +V +L+E E + EE+
Sbjct: 332 FLDERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVE-----RMEEEAE 386
Query: 422 RKETEGSKGECKPFL-EYVRESFNCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSL 480
R+E + P + E+V+++FN + CI THLPK Y+ + + M+A +
Sbjct: 387 RQEVVVNI----PTIGEFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVKIMIASRQS 442
Query: 481 LDSFRSLLFQKN--VVSEELEKLFSH----SVDEDFSLAFVGKRY----LLQLHQRRSEC 530
L R L + + V EE F SVD +L + KR+ +L+ R C
Sbjct: 443 LQRIRYFLRENSSRVDFEEGNFRFDCFKRLSVDCLKALRLLPKRFEIPDMLENEDIRKFC 502
Query: 531 LS---VLRNLWNSLDELNLPCTTSKQLL 555
L ++ + E+N+ T + +LL
Sbjct: 503 LQNADIILCTASGAAEMNVERTGNVELL 530
Score = 144 (55.7 bits), Expect = 1.2e-147, Sum P(3) = 1.2e-147
Identities = 35/120 (29%), Positives = 66/120 (55%)
Query: 22 VFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 81
VFSWS+++I N+ +K + +P+ F+SV +Y+ FV LL E +L S L+++ ++P+
Sbjct: 13 VFSWSIKDILNKDFYKQKT--VPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVSKSPF 70
Query: 82 AEVIAFEELKPYGANRYGIEVDY---WRNTICNSGKEPYKTLPGDILVLADFKPEKVSDL 138
++ + E + ++ Y + T S K Y+ GD++ L KP +++DL
Sbjct: 71 VQIRSMETKTKQSSGSSSNKLFYDITLKATESLSAK--YQPKCGDLIALTMDKPRRINDL 128
Score = 43 (20.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 38/169 (22%), Positives = 69/169 (40%)
Query: 1026 LWSPGSRGWPLKQFTQEEELLQKAKSLAKNDSNQFYEFVCAEADILSND-QSNLLMMNQQ 1084
L+SP S GW + E L+Q ++ YE E + + + + +++N
Sbjct: 343 LFSPFS-GW----MQRLESLIQFLENPEGKYERHVYEL--EEVERMEEEAERQEVVVNIP 395
Query: 1085 FIDS--KRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYSDDRIC------K 1136
I K++ N E + + I+D H ++D ++ + S RI
Sbjct: 396 TIGEFVKKNFNSLSEEVET-CIVDLFTHLPKVYLPYDDVKIMIASRQSLQRIRYFLRENS 454
Query: 1137 SQVSIETFLYFWNCWKDKIVKIFEYLGCLRMQQDVDDYRSYED---FCL 1182
S+V E + ++C+K V + L L + ++ D ED FCL
Sbjct: 455 SRVDFEEGNFRFDCFKRLSVDCLKALRLLPKRFEIPDMLENEDIRKFCL 503
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 895 (320.1 bits), Expect = 4.7e-140, Sum P(3) = 4.7e-140
Identities = 177/337 (52%), Positives = 235/337 (69%)
Query: 555 LKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 614
++ FC + A + F TASS ++ +I ++ LV+DE AQLKE ES LQL G+ HA+L
Sbjct: 531 IRKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALL 590
Query: 615 IGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRN 674
IGDE QLPAMV ++ D A FGRSLFERL L+ HSKHLL++QYRMHPSIS FPN +FY
Sbjct: 591 IGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGG 650
Query: 675 QILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEF-IYHSCRNMVEVSVVIKILQKL 733
+I D ANV+ YEK +L G FG ++FIN+ G+EEF HS +NMVEV+V+ KI+ L
Sbjct: 651 RITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNL 710
Query: 734 YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDG---FTVKVKSVDGFQGGEEDI 790
+K KQ +S+GV+SPY QV AI++++G +Y + FT+ V+SVDGFQGGE D+
Sbjct: 711 FKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDV 770
Query: 791 IIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKAR 850
IIISTVRCN G++GF+SN QR NVALTRARHCLW++GN TL S SIW L+ +++ R
Sbjct: 771 IIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRTR 830
Query: 851 QCFFKADEDRNLAKARLEVSKESVEIDAESLTSRSQR 887
CF+ A +D+NL A + + V SL+ R+ R
Sbjct: 831 GCFYDAVDDKNLRDAMSDALLDDVSSSFGSLSIRNGR 867
Score = 367 (134.2 bits), Expect = 4.7e-140, Sum P(3) = 4.7e-140
Identities = 101/315 (32%), Positives = 161/315 (51%)
Query: 24 SWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAE 83
SWSL++I N+ L K+++ IP+ F SV +Y FV LLEETR +L S ++ ++P +
Sbjct: 24 SWSLKDILNEDLSKEKIMTIPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSR 83
Query: 84 VIAFEELKPYGANRYGIEV--DYWRNTICNSGKEPYKTLPGDILVLADF-----KPEKVS 136
+++ E + R I+ D + E Y+ GDI+ L+ +P ++
Sbjct: 84 ILSVETKVIEYSGRSSIKWFHDIKLMDYADDKNEIYEPKCGDIIALSPLSLTEERP-RID 142
Query: 137 DL--LRVGRMWTFVSVTMVPDDXXXXXXXXXXXXXXXARNNLQVHDGTKKSFFF-IYLTN 193
DL L +G +++ + + +R+ + K +F ++L N
Sbjct: 143 DLDPLLLGYVFSVYGDSKI--------------SVHFSRS---ISQSEKHTFCTGVFLIN 185
Query: 194 ILPSKRIWNSLHM-CGNWKVITQVLGTDSVVEESCELCSLQRKGIWDEKFGPSL-SSTLN 251
I + RIWN+LH + +I VL D+ E C C G ++ + S+ LN
Sbjct: 186 ITTNTRIWNALHKDAADSTLIQSVLQEDASATEQCFSCENDVDGSDSDRVVDIIRSAKLN 245
Query: 252 EPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVA 311
Q A+ L+ +C HK V+L WGPPGTGKTKTV+ LL +L+++KC+T+ C PTN
Sbjct: 246 SSQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCAPTNTT 305
Query: 312 ITELASRALRLVKES 326
I +ASR L L KE+
Sbjct: 306 IVAVASRLLSLSKET 320
Score = 163 (62.4 bits), Expect = 4.7e-140, Sum P(3) = 4.7e-140
Identities = 60/219 (27%), Positives = 100/219 (45%)
Query: 287 TVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLF 346
T+ + LL + T+ C PTN AI E+ SR Y T + +G+I+L
Sbjct: 305 TIVAVASRLLSLSKETIVCAPTNSAIAEVVSR-FEFSTLFYGTSILERTTY-GMGNIVLS 362
Query: 347 GNKDRLKV--NPGFEEIYLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK 404
GN++R+ + N ++ + RV +L F GW+ S+ID LE+ ++Y +V +
Sbjct: 363 GNRERMGITSNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQHVNE 422
Query: 405 LK-EREDCNENQSEEKKCRKETEGSKGECKPFLEYVRESFNCAVIPLRNCIFIF-CTHLP 462
L+ ER +E + EE + R E + L +SF + ++N I H
Sbjct: 423 LELERMTEDEKKKEEVEERTMQEVDMADLSTHLP---KSFISSK-DVKNLIAACQALHRV 478
Query: 463 KTYISENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKL 501
+ ++ ENS +D K FR F K + + L+ L
Sbjct: 479 RYFLQENSSRD--DFKK--GGFRFNCFNKLISVDALQAL 513
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 908 (324.7 bits), Expect = 2.0e-135, Sum P(2) = 2.0e-135
Identities = 191/405 (47%), Positives = 260/405 (64%)
Query: 490 QKNVVSEELEKLFSHSVDEDFS-LAFVGKRYLLQLHQRRSE-CLSVLRNLWNSLDELNLP 547
+K + S + + + + E+ S + F + +R S+ CL LR L + +P
Sbjct: 271 KKMIASRQTLQRIRYFLRENSSRVDFEEGNFRFDCFKRLSDDCLKALRLLPKRFE---IP 327
Query: 548 CTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLA 607
+ ++ FC + A + TAS + +++ + + LV+DEAAQLKE ES LQL
Sbjct: 328 DMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLP 387
Query: 608 GINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFP 667
G+ HA+LIGDE QLPAMV +++ + A FGRSLFERL LL H+KHLLD+QYRMHPSIS FP
Sbjct: 388 GLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFP 447
Query: 668 NLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEF-IYHSCRNMVEVSVV 726
N +FY +I D NVK Y+K +L G F ++FIN+ G+EEF HS +NMVEV+V+
Sbjct: 448 NKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMVEVAVI 507
Query: 727 IKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDG--FTVKVKSVDGFQ 784
+I+ LYK + VS+GVVSPY Q+ AI++KIG +Y + G FT+ V+SVDGFQ
Sbjct: 508 SEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQ 567
Query: 785 GGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
GGEEDIIIISTVR N G +GF++N QR NVALTRARHCLW++GNE TL S SIW TL+
Sbjct: 568 GGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLI 627
Query: 845 CDAKARQCFFKADEDRNLAKARLEVSKESVEIDAESLTSRSQRGK 889
+++ R CF A ++ NL A E E V SL+ R+ G+
Sbjct: 628 SESRTRGCFHDATDEMNLRDAMNEALLEDVSSSLGSLSLRNGHGR 672
Score = 451 (163.8 bits), Expect = 2.0e-135, Sum P(2) = 2.0e-135
Identities = 108/294 (36%), Positives = 164/294 (55%)
Query: 199 RIWNSLHMCGNWKVITQ-VLGTDSVVEESCELCSLQRKGIWDEKFGPSLSSTLNEPQVGA 257
RIWN+LH + +T+ VL ++ E C CS + G D S+ LN Q A
Sbjct: 8 RIWNALHNEADISTLTKSVLQANTEGTEQC-FCS-ENDGRSDLVLDIIRSTKLNSSQEDA 65
Query: 258 VFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELAS 317
+ CL +C HK+ V+L WGPP TGKTKTV+ LLF+LL+++C+T+ C PTN AI ++ S
Sbjct: 66 ILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQVTS 125
Query: 318 RALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFE---EIYLDYRVKRLMECF 374
R L L KE+ + N + LG+I+L GN+DR+ +N +++LD R+ +L + F
Sbjct: 126 RLLSLFKEN---STAENATY-RLGNIILSGNRDRMGINKNDHVLLDVFLDERIGKLGKLF 181
Query: 375 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRKETEGSKGECKP 434
+P SGW S+I LE+ +Y +V +L+E E NE E++ R+E +
Sbjct: 182 SPFSGWMQRLESLIQFLENPEGKYERHVYELEEVERMNE---EDE--REEVVVN---IPT 233
Query: 435 FLEYVRESFNCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLLDSFRSLL 488
F E+V+++FN ++ CI THLPK Y+ + M+A + L R L
Sbjct: 234 FGEFVQKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQTLQRIRYFL 287
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 868 (310.6 bits), Expect = 1.0e-134, Sum P(2) = 1.0e-134
Identities = 180/362 (49%), Positives = 241/362 (66%)
Query: 530 CLSVLRNLWNSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVI 589
CL +LR L + ++ K FC + A + F TAS + ++ ++ ++ LV+
Sbjct: 334 CLQILRLLPERFEVSDM---LENNDTKTFCLQNADIIFCTASGAADMNPIRTGSVDLLVV 390
Query: 590 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHS 649
DEAAQLKE ES LQL+G+ HAVLIGDE QLPAMV ++ A FGRSLFERL LL H+
Sbjct: 391 DEAAQLKECESVAALQLSGLRHAVLIGDELQLPAMVHNE----AKFGRSLFERLVLLGHN 446
Query: 650 KHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGR 709
KHLL++QYRMHPSIS FPN +FY +I D ANV+ Y+K +L G FG ++FIN+ G
Sbjct: 447 KHLLNVQYRMHPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGE 506
Query: 710 EEF-IYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYE 768
EEF HS +NMVEV+V+ +I+ L+K + +S+GVVSPY QV AI+++ ++Y
Sbjct: 507 EEFGDGHSPKNMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYS 566
Query: 769 NKDG-FTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWIL 827
+ G FT+ V+SVDGFQGGEEDIIIISTVR N G +GF++N QR NVALTRARHCLW++
Sbjct: 567 SLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVI 626
Query: 828 GNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSKESVEIDAESLTSRSQR 887
GNE TL S S W L+ +++ CF+ A +++NL A E E V SL+ R+
Sbjct: 627 GNETTLALSGSSWAKLISESRTLGCFYDAADEKNLRDAMNEALLEDVSTSFGSLSIRNGY 686
Query: 888 GK 889
GK
Sbjct: 687 GK 688
Score = 487 (176.5 bits), Expect = 1.0e-134, Sum P(2) = 1.0e-134
Identities = 116/317 (36%), Positives = 179/317 (56%)
Query: 187 FFIYLTNILPSKRIWNSLHM-CGNWKVITQVLGTDSVVEESCELCSLQRKGIWDEKFGPS 245
F ++L N+ + RIWN+LH N +I VL +++ E C +C G D
Sbjct: 12 FGVFLMNLTTNTRIWNALHNEAANSTLIKSVLQENTLTTEQC-VCESGAHGS-DRVTNII 69
Query: 246 LSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLAC 305
S+ LN Q A+ +CL+ +C+HK V+L WGPPGTGKTKTV+ LLF LL++ C+T+ C
Sbjct: 70 RSAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVC 129
Query: 306 TPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRL--KVNPGFEEIYL 363
PTN AI E+ SR L L K S S ++T LG+I+L GN+ R+ K N +++L
Sbjct: 130 APTNTAIVEVTSRLLSLFKTS---SSEHST--YGLGNIVLSGNQARMGIKENDVLLDVFL 184
Query: 364 DYRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRK 423
D R+ L F+P SGW+ S+ID LE+ ++Y YV LKE E +E ++E+KK
Sbjct: 185 DERIGILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYVHLLKEVERMSE-EAEKKKKGA 243
Query: 424 ETEGSKGECKPFLEYVRESFNCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLLDS 483
+ + + F E+V+++F+ L + THLPK++I+ + + MV + L
Sbjct: 244 DKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSMVTARKALQR 303
Query: 484 FRSLLFQKNVVSEELEK 500
R L ++N ++ +K
Sbjct: 304 VRYFL-KENFSRDDFKK 319
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 831 (297.6 bits), Expect = 5.4e-124, Sum P(3) = 5.4e-124
Identities = 172/317 (54%), Positives = 215/317 (67%)
Query: 561 KRASLFFSTASSSYKLHSV---------KIEPLNFLVIDEAAQLKESESTIPLQLAGINH 611
K LF ST L S+ K + LV+DEAAQLKE ES LQL G+ H
Sbjct: 316 KLRKLFLSTCGWKQSLESIIDLLENTETKTGNIEVLVVDEAAQLKECESVAALQLPGLRH 375
Query: 612 AVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQF 671
A+LIGDE QLPAMV + + A FGRSLFERL LL H KHLLD+QYRMHPSIS FP +F
Sbjct: 376 AILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGHKKHLLDVQYRMHPSISRFPYKEF 435
Query: 672 YRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEF-IYHSCRNMVEVSVVIKIL 730
Y +I D ANV+ Y+K +L G FG ++FIN+ G+EEF S +NMVEV+VV +I+
Sbjct: 436 YGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGDSPKNMVEVAVVSEII 495
Query: 731 QKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDG--FTVKVKSVDGFQGGEE 788
L+K K +S+GV++PY QV AI+++I +Y + G FTV V+SVDGFQGGEE
Sbjct: 496 SNLFKVSRERKMKMSVGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEE 555
Query: 789 DIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAK 848
DIIIISTVR N+ G +GF+SN QR NVALTRARHCLW++GNE TL S SIW L+ D+K
Sbjct: 556 DIIIISTVRSNSNGKVGFLSNRQRANVALTRARHCLWVIGNESTLARSGSIWANLISDSK 615
Query: 849 ARQCFFKADEDRNLAKA 865
R+CF+ A +D+ L A
Sbjct: 616 RRKCFYDAKDDKRLRDA 632
Score = 273 (101.2 bits), Expect = 5.4e-124, Sum P(3) = 5.4e-124
Identities = 59/149 (39%), Positives = 86/149 (57%)
Query: 247 SSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACT 306
SS LN Q A+ +CL D +HK+ V+L WGP KTKTV+ LL LL+++C+T+ C
Sbjct: 201 SSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKLRCKTVVCA 257
Query: 307 PTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPG--FEEIYLD 364
PTN AI E+ SR L L Y + LG+I L GN+ R+++ ++LD
Sbjct: 258 PTNTAIVEVTSRLLAL-SNKYSEHATYG-----LGNIFLAGNQKRMRIKDTDYLRNVFLD 311
Query: 365 YRVKRLMECFAPLSGWRHCFSSMIDLLED 393
+R+ +L + F GW+ S+IDLLE+
Sbjct: 312 HRISKLRKLFLSTCGWKQSLESIIDLLEN 340
Score = 174 (66.3 bits), Expect = 5.4e-124, Sum P(3) = 5.4e-124
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 22 VFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 81
+FSWS+E+I N+ L+K +++ IP+ F SV +Y FV LLEETR +L + +++ +A
Sbjct: 13 IFSWSMEDILNKDLYKQKIKTIPDKFSSVNEYLKCFVPHLLEETRTELSTSFKSLSKAHL 72
Query: 82 AEVIAFEELKPYGANRYGIEVDYWRN-TICNSGKEPYKTLPGDILVLADFKPEKVSDL 138
E+ + E + + ++ Y + S +E Y+ GD++ L +P V DL
Sbjct: 73 FEISSLETMTKESSGSLSNKLFYDMSINDALSIREKYQPKCGDLIALTKERPRGVDDL 130
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
Identities = 280/663 (42%), Positives = 393/663 (59%)
Query: 190 YLTNILPSKRIWNSLHMC-GNWKVITQVLGTDSVVEESCELCSLQRKGIWDEKFGPSLSS 248
+L + + RIW +LH GN +I VL ++ E S+ + + S+
Sbjct: 52 FLIYLTTNTRIWKALHNGDGNLSLIKSVLQANTADTEQ----SVSSRNWGNHVLDIIRSA 107
Query: 249 TLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPT 308
LN Q A+ ACL + K+ V+L WGPPGTG TKTV+ LLF+LL + C+T+ CTPT
Sbjct: 108 NLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCTPT 167
Query: 309 NVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKV----NPGFEEIYLD 364
N A+ +ASR L L KES S ++ + LG+I+L GN+ R+ + N ++LD
Sbjct: 168 NTAVVAVASRLLALFKES---SSTEHSTY-GLGNIVLVGNRVRMGIDERGNDDLLNVFLD 223
Query: 365 YRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRKE 424
R+ +L E F+P + W ++ID+LE+ S Y Y+ L ER+ ENQ E K
Sbjct: 224 DRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYL-LLSERK---ENQ-ETKNIL-- 276
Query: 425 TEGSKGECKPFL--EYVRESFNCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLLD 482
T + K FL + E ++ + L +T + +DMV L + L
Sbjct: 277 TAFGEFVMKMFLGSKETPEKEEEIILTFGEFVMEKFDGLSETM--KKIQKDMVDLYTHLP 334
Query: 483 -SFRSLLFQKNVV--SEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWN 539
SF S KN++ + L + + ++ S F + + +CL LR L
Sbjct: 335 KSFLSSNDVKNMIVARQALRQARTFLQEKQGSFTFDCFNKFVCV-----DCLRTLRLLSK 389
Query: 540 SLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESE 599
+ +P K+ ++ FC + A + F TAS + ++ + + ++ LV+DEAAQLKE E
Sbjct: 390 RFE---IPALLMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLVVDEAAQLKECE 446
Query: 600 STIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRM 659
S LQL G++HAVLIGDE QLPAMV+S++ + A F RSLFERL L H KHLL++QYRM
Sbjct: 447 SVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRM 506
Query: 660 HPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEF-IYHSCR 718
HPSISLFPN++FY +I D VK +Y+K +L G FG ++FIN+ G+EEF HS +
Sbjct: 507 HPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEEFGDGHSPK 566
Query: 719 NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYEN-KDG-FTVK 776
NMVE++VV +IL L K +K +S+GV+SPY AQV AI+++IG +Y + D FT+
Sbjct: 567 NMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLN 626
Query: 777 VKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISS 836
V+SVDGFQGGEEDIIIISTVR N G+IGF+SN QR NVALTRARHCLW++GNERTL S
Sbjct: 627 VRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTLSLS 686
Query: 837 ESI 839
SI
Sbjct: 687 GSI 689
Score = 407 (148.3 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 111/328 (33%), Positives = 172/328 (52%)
Query: 183 KKSFFFIYLTNILPSKRIWNSLHMC-GNWKVITQVLGTDSVVEESCELCSLQRKGIWDEK 241
+ FF IYLT + RIW +LH GN +I VL ++ E S+ + +
Sbjct: 48 RSGFFLIYLTT---NTRIWKALHNGDGNLSLIKSVLQANTADTEQ----SVSSRNWGNHV 100
Query: 242 FGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCR 301
S+ LN Q A+ ACL + K+ V+L WGPPGTG TKTV+ LLF+LL + C+
Sbjct: 101 LDIIRSANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCK 160
Query: 302 TLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKV----NPG 357
T+ CTPTN A+ +ASR L L KES S ++ + LG+I+L GN+ R+ + N
Sbjct: 161 TVVCTPTNTAVVAVASRLLALFKES---SSTEHSTY-GLGNIVLVGNRVRMGIDERGNDD 216
Query: 358 FEEIYLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQS- 416
++LD R+ +L E F+P + W ++ID+LE+ S Y Y+ L ER++ E ++
Sbjct: 217 LLNVFLDDRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYL-LLSERKENQETKNI 275
Query: 417 ----EEKKCR-----KETEGSKGEC-KPFLEYVRESFNC---AVIPLRNCIFIFCTHLPK 463
E + KET + E F E+V E F+ + ++ + THLPK
Sbjct: 276 LTAFGEFVMKMFLGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKDMVDLYTHLPK 335
Query: 464 TYISENSFQDMVALKSLLDSFRSLLFQK 491
+++S N ++M+ + L R+ L +K
Sbjct: 336 SFLSSNDVKNMIVARQALRQARTFLQEK 363
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 454 (164.9 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 111/313 (35%), Positives = 173/313 (55%)
Query: 562 RASLFFSTASSS-YKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 620
R+ + ST S S Y + + +++DEAAQ E + IPL+ + +L+GD Q
Sbjct: 1584 RSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLR-HDVKKCILVGDPQQ 1642
Query: 621 LPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
LP SK++ + SLF+RL + +L QYRMHP IS FP+ FYR ++ DG
Sbjct: 1643 LPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGK 1702
Query: 681 NVKSKSYEKHYLPGTEFGPYTFINIIG--GREEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
NV+ + + + FGP F ++ G + S RN EV + I+ +L +
Sbjct: 1703 NVREYKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYP 1762
Query: 739 GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRC 798
+K + IGV++PY +Q V + Y+N V+V ++DGFQG E+D +I S+VR
Sbjct: 1763 NTKDL-EIGVITPYKSQSVDLFNAFKG-YQN-----VEVSTIDGFQGKEKDFVIFSSVRA 1815
Query: 799 NTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAK-ARQCFFKAD 857
++G SIGF+S+ +R+NV LTRA++ + ILGN +L+S+ WG LV D + C+F
Sbjct: 1816 HSGHSIGFLSDIRRMNVGLTRAKYSMVILGNS-SLLSNNDDWGNLVNDLRQTNNCYFPIS 1874
Query: 858 EDRNLAKARLEVS 870
+++ K LE S
Sbjct: 1875 S-KSIDKGVLEKS 1886
Score = 150 (57.9 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 75/267 (28%), Positives = 127/267 (47%)
Query: 191 LTNILPSKRIWNSLHMCGNWKVITQVLGTDSVVEESCELCSLQRKGIWDEKFGPSLSSTL 250
+T++ R + +LHM G + T ++ + + S + I D+ F L S+L
Sbjct: 1316 VTSLSTISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFK--IPDKLF-QKLRSSL 1372
Query: 251 NEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLL--FS--LLRIKC-----R 301
NE Q+ A+ + L+ L G L GPPGTGKTKT+ LL F+ L I+ +
Sbjct: 1373 NESQLSAIASTLKNL-----GGFSLLQGPPGTGKTKTILSLLSVFTTVLTNIEKSHSDPK 1427
Query: 302 TLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEI 361
L C P+N A+ E+A LR+ K+ +N F P+ I GN+ ++P ++I
Sbjct: 1428 ILVCAPSNAAVDEIA---LRIKKDGLI--DKNGNKFKPV--ICRIGNQSH--IHPSVQDI 1478
Query: 362 YLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQY-HIYVEKLKEREDCNENQSEEKK 420
V+ L+ L ++ S++ + ED + + + K+KE++ + Q ++
Sbjct: 1479 ----SVESLI-----LGEYKDKNSAIAN--EDQKKENTRLKIIKIKEKQVEIDKQIKDLA 1527
Query: 421 CR-KETEGSK--GECKPFLEYVRESFN 444
R K+ E +K E L Y RE +N
Sbjct: 1528 ERLKQQEDNKLRNEITK-LNYTREKYN 1553
Score = 51 (23.0 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 39 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLE 74
+++ +P +F +K Y F L+EE R Q+ L+
Sbjct: 1156 ELKPVPGTFDDLKHYIDIFQPLLIEEFRAQVIRNLD 1191
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 485 (175.8 bits), Expect = 9.6e-48, Sum P(4) = 9.6e-48
Identities = 120/301 (39%), Positives = 165/301 (54%)
Query: 563 ASLFFSTASSS-YKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 621
A + F+T SSS KL S + +VIDEAAQ E PL L G VL+GD QL
Sbjct: 753 AEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQL 811
Query: 622 PAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
PA V SK + + RSLFER L LL +QYRMHP I FP+ FY+ ++ D +
Sbjct: 812 PATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDSES 871
Query: 682 VKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSC--RNMVEVSVVIKI---LQKLYKA 736
+ S E +Y PY F NI GRE S N+ E + + LQK K+
Sbjct: 872 ISSAPDEIYYKDPV-LRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHLQKTLKS 930
Query: 737 WVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTV 796
K VS+GV++PY Q+ ++ + G+ + + + +VD FQG E D+II+S V
Sbjct: 931 LGAGK--VSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIMSCV 988
Query: 797 RCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKA 856
R + G +GF+S+ +R+NVALTRAR LW++GN L+ SE W L+ DA+ R CF +
Sbjct: 989 RAS-GHGVGFVSDIRRMNVALTRARRALWVMGNASALMKSED-WAALISDARGRNCFMEM 1046
Query: 857 D 857
D
Sbjct: 1047 D 1047
Score = 76 (31.8 bits), Expect = 9.6e-48, Sum P(4) = 9.6e-48
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 39 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSG-LEAMRRAPYAEVIAFEELKPYGANR 97
++ +PE F+S+++Y F L EE R QL S +E Y +V +K
Sbjct: 253 ELRSVPERFESMEEYVRVFEPLLFEECRAQLYSTWVELAEANTYVKV----RIKSIERRE 308
Query: 98 YGIEVDYWRNTICNS--G-KEPYKTLPGDILVLADFKPEKVSDLLRVGRM 144
G W + I NS G K +K GD+ VL+ PE D GR+
Sbjct: 309 RG-----WYDVILNSLNGCKWAFKE--GDVAVLSTPLPESDEDHEDAGRV 351
Score = 67 (28.6 bits), Expect = 9.6e-48, Sum P(4) = 9.6e-48
Identities = 20/55 (36%), Positives = 25/55 (45%)
Query: 242 FGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELR--W------GPPGTGKTKTV 288
F L + N PQ+ A+ SGV+ + W GPPGTGKT TV
Sbjct: 458 FVDHLHRSFNAPQLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHTV 512
Score = 56 (24.8 bits), Expect = 9.6e-48, Sum P(4) = 9.6e-48
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 299 KCRTLACTPTNVAITELASRAL 320
K R L C P+N A EL SR L
Sbjct: 578 KPRMLVCAPSNAATDELLSRVL 599
Score = 42 (19.8 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 218 GTDSVVEESCELCSLQRKGIWDEKFGPSLSSTLNE 252
GT S +++S L L+ + IW SL++T E
Sbjct: 380 GTGSKIDDSHILRKLKPQDIWHLTVLGSLATTQRE 414
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 476 (172.6 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 117/301 (38%), Positives = 166/301 (55%)
Query: 563 ASLFFSTASSS-YKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 621
A + F+T SSS KL S + +VIDEAAQ E PL L G VL+GD QL
Sbjct: 916 AEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQL 974
Query: 622 PAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
PA V SK + + RSLFER L LL +QYRMHP I FP+ FY+ ++ D +
Sbjct: 975 PATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDSES 1034
Query: 682 VKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSC--RNMVEVSVVIKI---LQKLYKA 736
V + E +Y PY F +I GRE S N+ E + + LQ+ K+
Sbjct: 1035 VSTAPDEIYYKDSV-LKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYLHLQRTLKS 1093
Query: 737 WVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTV 796
G K VS+GV++PY Q+ ++ + G+ + + + +VD FQG E D+II+S V
Sbjct: 1094 LGGGK--VSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERDVIIMSCV 1151
Query: 797 RCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKA 856
R + G +GF+++ +R+NVALTRA+ LW++GN L+ E W L+ DAKAR CF +
Sbjct: 1152 RASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALITDAKARNCFMEM 1209
Query: 857 D 857
+
Sbjct: 1210 E 1210
Score = 110 (43.8 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 80/315 (25%), Positives = 128/315 (40%)
Query: 5 KGCSSSTKKAVGFTGH--TVFSWSLENIFNQSLF---KD-QVEKIPESFQSVKQYFGSFV 58
K +S K+A T + T L + N+ + +D ++ +PE F+S+ +Y F
Sbjct: 377 KKFTSFKKQATNSTQYQDTSVERLLREVTNEKFWHHPEDTDLQSVPERFESMDEYVRVFE 436
Query: 59 FPLLEETRMQLRSGLEAMRRA-PYAEV-IAFEELKPYGANRYGIEVDYWRNTICNSGKE- 115
L EE R QL S E + A Y +V I F E + G W + I NS E
Sbjct: 437 PLLFEECRAQLYSTWEELAEANSYMKVRIKFIERRERG----------WYDVILNSVNEC 486
Query: 116 PYKTLPGDILVLADFKPEKVSDLLRVGRMWTFVSVTMVPDDXXXXXXXXXXXXXXXARNN 175
+ GD+ VL++ PE + VGR+ V +P D A ++
Sbjct: 487 KWAFKEGDVAVLSNPVPESEGEHDDVGRVAGTVR-RYIPVDTRDPHGAILHFYVGDAYDS 545
Query: 176 -LQVHDG-------TKKSFFFIYLTNILPSKRIWNSLHMCGNWKVITQVLGTDSVVEESC 227
++ D K+ + L +I ++R + +LH Q +++++ S
Sbjct: 546 GSKIDDNHILRKLKPKEIWHLTVLGSIATTQREYVALHAFSQLNPQMQ----NAILKPSP 601
Query: 228 ELCSL--QRKGIWDEKFGPSLSSTL----NEPQVGAVFACLRRLDCDHKSGVELR--W-- 277
E ++ + F PS + L N PQ+ A+ SGV+ + W
Sbjct: 602 EQFPNYGEQTPTVPDCFTPSFAGHLHRSFNAPQLAAIHWAAMHTAAGTSSGVKRQDPWPF 661
Query: 278 ----GPPGTGKTKTV 288
GPPGTGKT TV
Sbjct: 662 TLVQGPPGTGKTHTV 676
Score = 56 (24.8 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 299 KCRTLACTPTNVAITELASRAL 320
K R L C P+N A EL SR L
Sbjct: 741 KPRMLVCAPSNAATDELLSRVL 762
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 464 (168.4 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 107/282 (37%), Positives = 171/282 (60%)
Query: 562 RASLFFSTASSSYKLHSVKIE-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 620
RAS+ FST S S +VK + +++DE+ Q E S IPL + I +L+GD Q
Sbjct: 1357 RASIVFSTLSGSGS-ETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQ 1415
Query: 621 LPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
LP + S S SLFERL+ + + +L +QYRMHP+IS FP+ QFYR+++LDG
Sbjct: 1416 LPPTIFSTESAENGLNISLFERLSKVLPVE-MLHVQYRMHPTISRFPSNQFYRDRLLDGD 1474
Query: 681 NVKSKSYEKH-YLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVG 739
NVKS Y +H + ++GP F ++I +EE S +N +E+++V +++KL + +
Sbjct: 1475 NVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPE 1534
Query: 740 SKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCN 799
K+ S G+++PY Q I+++ ++ ++ ++DGFQG E+DIII+S VR
Sbjct: 1535 CKKF-SFGIITPYKLQKSEIKEQ-HKQFNYP--LNIETSTIDGFQGSEKDIIILSCVRSE 1590
Query: 800 TGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWG 841
IGF+S+ +R+NVALTRA+ L+++GN + L+ + WG
Sbjct: 1591 R---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1628
Score = 112 (44.5 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 49/200 (24%), Positives = 90/200 (45%)
Query: 173 RNNLQVHDGTKKSFFFIYLTNILPSKRIWNSLHMCGNWKVI-TQVLGTDSVVEESCELCS 231
+N L+ + K+ +FI ++N + R N++ N ++ Q+L + ++ S
Sbjct: 1169 KNYLKDSNTIKEKLYFIKVSNCITFIRELNAIKDFRNSGILFDQILQPS---RKDHDILS 1225
Query: 232 LQRKGIWDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSML 291
+R I LN Q ++ L G+ L GPPGTGKT T+ L
Sbjct: 1226 SKRMAI-PSLLRSMCIQELNTSQFNSIETSLST------KGITLIQGPPGTGKTTTIYYL 1278
Query: 292 LFSLLRI--KCRTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNK 349
L LL I + + L C P++ ++ E+A R + K+ D + P+ P +++ G K
Sbjct: 1279 LSILLAINPEFKILVCGPSHASVDEIAKRCSK--KKLIGLDGK---PYLP--NMVRIGKK 1331
Query: 350 DRLKVNPGFEEIYLDYRVKR 369
+ ++P I + + +R
Sbjct: 1332 EN--ISPDCHSISIFNKTQR 1349
Score = 38 (18.4 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 37 KDQVEKIPESFQSVKQYFGS 56
K +++IP++ S K GS
Sbjct: 559 KPTIKQIPQTVASTKSVIGS 578
Score = 38 (18.4 bits), Expect = 1.0e-42, Sum P(4) = 1.0e-42
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 72 GLEAMRRAPYAEVIAFEELKPYGANRYGIEVD 103
GL+ ++ + +F+E+ Y ++ I+V+
Sbjct: 1068 GLDKIKMIDGPTIHSFKEISDYSIMKFEIDVN 1099
Score = 38 (18.4 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 385 SSMIDLLEDCVSQYHIYVEKLKE 407
S +ID LED + + + K++E
Sbjct: 305 SILIDSLEDIENYFPTFQSKIQE 327
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 411 (149.7 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 105/287 (36%), Positives = 159/287 (55%)
Query: 561 KRASLFFST-ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 619
K AS+ FST A S K P + ++IDE+ Q E S IPL L + +L+GD
Sbjct: 1305 KSASIVFSTLAGSGSKAIFENFSP-DIVLIDESTQSSEPTSIIPLSLGSVKKLILVGDPV 1363
Query: 620 QLPAMVESKISDGASFGR--SLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQIL 677
QLP + SK GA G SLFERL + L+ QYRMHP S F + +FY +
Sbjct: 1364 QLPPTIFSK--QGADCGLKISLFERLAK-SIDVQFLNTQYRMHPVTSKFISEEFYNGTLK 1420
Query: 678 DGANVKSKSYEK---HYLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLY 734
DG NV SY H+ P FGP F ++ ++ I S N E+ V ++++L
Sbjct: 1421 DGENVSIDSYNNCKFHFDPS--FGPMKFFDLPKSNQKVIKKSIMNQDEIDKVFTLIKELI 1478
Query: 735 KAWVGSKQMVSIGVVSPYTAQVVAIRKKIG-SEYENKDGFTVKVKSVDGFQGGEEDIIII 793
+ + K++ S G+++PY Q+ I++++ SE+ N + V ++DG QG E+DIII+
Sbjct: 1479 EKYPECKKL-SFGIITPYKLQMNQIKEQLNRSEHHN---LNISVSTIDGVQGSEKDIIIM 1534
Query: 794 STVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
S VR IGF+S+ +R+NVALTRA+ L+++G + L + ++ W
Sbjct: 1535 SCVRSIEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKVL-AKDNTW 1580
Score = 130 (50.8 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 241 KFGPSLSST----LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL 296
KF P+L + LNE Q+ A+ + L +SG+ L GPPGTGKT T++ LL LL
Sbjct: 1180 KFPPTLETICKEKLNESQLNAIKSSLV------ESGITLIQGPPGTGKTTTINYLLSVLL 1233
Query: 297 RI--KCRTLACTPTNVAITELASRALR 321
I K + L C P++ ++ E+A R L+
Sbjct: 1234 AIDKKFKILVCGPSHASVDEVAKRCLK 1260
Score = 40 (19.1 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 471 FQDMVALKSLLDSFRSLLFQKNVVSEELEKLFSHSVDED 509
F+D ++ +L+ LL +N +L KL ++ED
Sbjct: 751 FEDPKSVLFILNELNKLLKNENNNQNKLNKL-KRIIEED 788
Score = 39 (18.8 bits), Expect = 5.1e-32, Sum P(2) = 5.1e-32
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 310 VAITELASRALRLVKESYKRDSRNNTPFCPLGDILLF 346
+ + +++ + + E +RN +GDILLF
Sbjct: 1045 IEVVQISRQTKFITVELIIHGNRNKLEEISVGDILLF 1081
Score = 37 (18.1 bits), Expect = 8.2e-32, Sum P(2) = 8.2e-32
Identities = 16/68 (23%), Positives = 29/68 (42%)
Query: 385 SSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRKETEGSKGECKPFLEYVRESFN 444
S ++ + ED S I E K ++ N NQ++ K ++ E + + + N
Sbjct: 745 SLLMKIFEDPKSVLFILNELNKLLKNENNNQNKLNKLKRIIEEDTKSFEQQINNCNRTLN 804
Query: 445 CAVIPLRN 452
+IP N
Sbjct: 805 -QLIPSEN 811
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 442 (160.7 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 111/327 (33%), Positives = 174/327 (53%)
Query: 561 KRASLFFSTAS-SSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 619
+ A++ F+T S S L + + ++IDEAAQ E + IPL L+GD
Sbjct: 460 EEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATR-CKQVFLVGDPK 518
Query: 620 QLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
QLPA V S ++ + +G S+FERL + +L QYRMHP I FP+ QFY + DG
Sbjct: 519 QLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDG 578
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGREEF---IYHSCRNMVEVSVVIKILQKLYKA 736
+++++++ + + FGP+ F +I G+E S N+ EV V+ I +L
Sbjct: 579 SDIEAQT-TRDWHKYRCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTM 637
Query: 737 WVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTV 796
+ K + ++SPY QV + + + + V + +VDGFQG E+D+ I S V
Sbjct: 638 YPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCV 697
Query: 797 RCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKA 856
R N G IGF+SN +R+NV +TRA+ + ++G+ TL S+ +W L+ A+ R FK
Sbjct: 698 RANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-KSDPLWKNLIESAEQRNRLFKV 756
Query: 857 DEDRN--LAKARLEVSK--ESVEI-DA 878
+ N ++ LE K E +EI DA
Sbjct: 757 SKPLNNFFSEENLETMKLTEDMEIPDA 783
Score = 78 (32.5 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 33/109 (30%), Positives = 55/109 (50%)
Query: 198 KRIWNSLHMCGNWKVITQVLGTDSVVE---ESCELCSLQRK-GIWDEKF---GPS---LS 247
KR++ SL +CG +I + + SV + + ++ G DE + GP +
Sbjct: 197 KRVF-SLKLCGLSTIIREYIALRSVSSLPFKDLIFTAAEKSCGFGDEAWKISGPLNEFFN 255
Query: 248 STLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL 296
LN+ Q A+ L R KS V ++ GPPGTGKT+T+ +L +++
Sbjct: 256 ENLNKSQKEAIDVGLSR-----KSFVLIQ-GPPGTGKTQTILSILGAIM 298
Score = 52 (23.4 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 297 RIKCRTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNP 356
+ + R L C P+N A+ E+ LRL+ RD T + P I+ G LK +
Sbjct: 372 KYRLRVLVCAPSNSALDEIV---LRLLSSGL-RDENAQT-YTP--KIVRIG----LKAHH 420
Query: 357 GFEEIYLDYRV 367
+ LD+ V
Sbjct: 421 SVASVSLDHLV 431
Score = 43 (20.2 bits), Expect = 7.4e-38, Sum P(3) = 7.4e-38
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 9 SSTKKAVGFTGHT-VFSWSLENIFNQSLFKDQVEKI 43
++ +K+ GF S L FN++L K Q E I
Sbjct: 231 TAAEKSCGFGDEAWKISGPLNEFFNENLNKSQKEAI 266
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 447 (162.4 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 101/282 (35%), Positives = 168/282 (59%)
Query: 561 KRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 620
+ A++ F+T S+S N +++DE+ Q E S IPL + I +L+GD Q
Sbjct: 1707 RNATIIFATLSASGSKPIRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQ 1766
Query: 621 LPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
LP + S S SLFERL+ + + +L+ QYRMHP+IS FP+ QFY++++LDG
Sbjct: 1767 LPPTIFSSESAKNGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLDGD 1825
Query: 681 NVKSKSYEKH-YLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVG 739
NVKS Y +H + ++GP F ++I +EE S +N +E+++V +++KL + +
Sbjct: 1826 NVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPE 1885
Query: 740 SKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCN 799
K+ S G+++PY Q I+++ ++ ++ ++DG QG E+DIII+S VR
Sbjct: 1886 CKKF-SFGIITPYKLQKSEIKEQ-HKQFNYP--LNIETSTIDGVQGSEKDIIILSCVRSE 1941
Query: 800 TGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWG 841
IGF+S+ +R+NVALTRA+ L+++GN + L+ + WG
Sbjct: 1942 R---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1979
Score = 110 (43.8 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 272 GVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALR 321
G+ L GPPGTGKT T+ LL LL I K + L C P++ ++ E+A R L+
Sbjct: 1610 GITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVDEVAKRCLK 1661
Score = 57 (25.1 bits), Expect = 2.8e-37, Sum P(2) = 2.8e-37
Identities = 36/150 (24%), Positives = 64/150 (42%)
Query: 463 KTYISENSFQ---DMVALKSLLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRY 519
+ I+E+ Q ++ +K L + S + + N ++ +EK+++ S+ L F
Sbjct: 1160 RNIINESKIQFNTNINGIKHRLKTDFSKIQKNNTSNQNIEKIYNKSLSLMVLLEFNHFSQ 1219
Query: 520 LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQLLKDFCFKR-ASLFFSTAS---SSYK 575
+L ++ C L L + L + N ++K F S F ST S+ K
Sbjct: 1220 YSELREKTKTCRQYLNQLNSELAKNNKMKLEFSDIVKGKFFDNLVSNFESTTKINGSTLK 1279
Query: 576 LHSVKI---EPLNF---LVIDEAAQLKESE 599
+ S K+ E L L +E QL +SE
Sbjct: 1280 IPSFKLLNSEKLGLISKLQFNEIYQLIKSE 1309
Score = 52 (23.4 bits), Expect = 9.5e-37, Sum P(2) = 9.5e-37
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 486 SLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRY-LLQLHQRRSECLSVLRNL-WNSLDE 543
S L Q+N + E +K F+ +D L F + + LL +H +R C+ V + S+D
Sbjct: 935 SNLSQRNYIKEYFDKNFTVENSQDI-LNFKLEAFNLLNIHHQRF-CIKVEAFIDQKSIDI 992
Query: 544 LN 545
LN
Sbjct: 993 LN 994
Score = 43 (20.2 bits), Expect = 8.3e-36, Sum P(2) = 8.3e-36
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 476 ALKSLLDSF-RSLLFQKNVVSEELEKLFSHSVD 507
A K ++ F R + F KN S+ +++L SV+
Sbjct: 882 ATKDIISLFKRKIEFHKNNTSKAVQELLISSVN 914
Score = 42 (19.8 bits), Expect = 3.7e-34, Sum P(3) = 3.7e-34
Identities = 7/25 (28%), Positives = 18/25 (72%)
Query: 471 FQDMVALKSLLDSFRSLLFQKNVVS 495
+ + +A K + D FR+L+ +K++++
Sbjct: 274 YTENIASKEISDKFRNLVQKKDLLN 298
Score = 42 (19.8 bits), Expect = 4.7e-34, Sum P(3) = 4.7e-34
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 472 QDMVALK---SLLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRS 528
+D+VA+K + D + + +++ L K F H+ F+L V +L+ ++
Sbjct: 1447 EDLVAIKFNIKVKDELEEI-YLNDIL---LFKTFDHTSKPMFALGLVTSNSVLKGKKQII 1502
Query: 529 ECLSVLRNLWNSLDE----LNLPCTTSKQLL 555
C VL + L E ++L TSK +L
Sbjct: 1503 ICEFVLSDSTKPLIEKFYSVSLNSKTSKDIL 1533
Score = 39 (18.8 bits), Expect = 3.7e-34, Sum P(3) = 3.7e-34
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 504 HSVDEDFSLAFVGKRYLLQ 522
H + DF+ GK Y ++
Sbjct: 385 HQISNDFNFVLKGKYYRIK 403
Score = 39 (18.8 bits), Expect = 9.7e-34, Sum P(3) = 9.7e-34
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 329 RDSRNNTP----FCPLGDILLFGNKDRLKVNPGFEEIYLD 364
R N+TP F L + L+ K +KV EEIYL+
Sbjct: 1430 RVKMNDTPTIHSFRELSEDLV-AIKFNIKVKDELEEIYLN 1468
Score = 38 (18.4 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 38 DQVEKIPESFQSVKQYFGSFVFPLL-EETRMQLRSGLEAMRRAPYAE 83
D + + +S+ + F + + PL+ EE R QL + +E
Sbjct: 1375 DNIHSLQDSYSDQSE-FVNLMKPLIVEEYRAQLEGDFNEIEGVSISE 1420
Score = 37 (18.1 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 484 FRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRR 527
F L Q + +LEKL S ++ + L FV L+L +
Sbjct: 673 FNLLEIQHQSLKIDLEKLISQTISSNV-LDFVPVPSKLELKSEK 715
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 451 (163.8 bits), Expect = 5.7e-41, Sum P(4) = 5.7e-41
Identities = 104/283 (36%), Positives = 171/283 (60%)
Query: 561 KRASLFFSTASSSYKLHSVKIE-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 619
+ A++ FST S+S SV+ N +++DE+ Q E S IPL + I +L+GD
Sbjct: 1508 RNANIVFSTLSASGS-GSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPL 1566
Query: 620 QLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
QLP + S S SLFERL+ + + +L+ QYRMHP+IS FP+ QFY++++LDG
Sbjct: 1567 QLPPTIFSSGSAENGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLDG 1625
Query: 680 ANVKSKSYEKH-YLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
NVKS Y +H + ++GP F ++I +EE S +N +E+++V +++KL + +
Sbjct: 1626 DNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYP 1685
Query: 739 GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRC 798
K+ S G+++PY Q I+++ ++ ++ ++DG QG E+DIII+S VR
Sbjct: 1686 ECKKF-SFGIITPYKLQKSEIKEQ-HKQFNYP--LNIETSTIDGVQGSEKDIIILSCVRS 1741
Query: 799 NTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWG 841
IGF+S+ +R+NVALTRA+ L+++GN + L+ + WG
Sbjct: 1742 ER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1780
Score = 115 (45.5 bits), Expect = 5.7e-41, Sum P(4) = 5.7e-41
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 270 KSGVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALR 321
K G+ L GPPGTGKT T+ LL LL I K + L C P++ ++ E+A R L+
Sbjct: 1409 KKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVDEVAKRCLK 1462
Score = 54 (24.1 bits), Expect = 9.0e-36, Sum P(3) = 9.0e-36
Identities = 33/134 (24%), Positives = 57/134 (42%)
Query: 476 ALKSLLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLR 535
A+K+ L + S + + N ++ +EK+++ S+ L F +L ++ C
Sbjct: 978 AIKNRLKTDISKIQKNNTSNQNIEKIYNKSLSLMVLLEFNHFSQYSELKEKTKTCRHKYN 1037
Query: 536 NLWNSLDELNLPCTTSKQLLKDFCFKR-ASLFFSTAS---SSYKLHSVKI---EPLNF-- 586
L + L + N ++K F S F ST S+ K+ S K+ E L
Sbjct: 1038 QLNSELAKKNRTKLEFSNIVKGKFFDNLVSNFESTTKINGSTLKIPSFKLLNSEKLGLIS 1097
Query: 587 -LVIDEAAQLKESE 599
L +E QL +SE
Sbjct: 1098 KLQFNEIHQLIKSE 1111
Score = 40 (19.1 bits), Expect = 2.6e-34, Sum P(3) = 2.6e-34
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 461 LPKTYISENSFQDM----VALKSLLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVG 516
L K+ ++ + F ++ + SL++ F +L+ Q+N + E +K F+ F +
Sbjct: 700 LLKSSVNPSKFNEINETIFTIISLIE-FSNLV-QRNYIKEYFDKNFTVKNSPTFLDSRSE 757
Query: 517 KRYLLQLHQRRSECLSV 533
LL H +R C+ V
Sbjct: 758 AFNLLNTHHQRF-CIKV 773
Score = 39 (18.8 bits), Expect = 5.7e-41, Sum P(4) = 5.7e-41
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 38 DQVEKIPESFQSVKQYFGSFVFPLL-EETRMQLRSGLEAMRRAPYAE 83
D + + +S+ + F + + PL+ EE R QL + + +E
Sbjct: 1175 DNIHSLQDSYSDQSE-FVNLMKPLIVEEYRAQLEGDFDEIEGISISE 1220
Score = 38 (18.4 bits), Expect = 4.9e-33, Sum P(4) = 4.9e-33
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 498 LEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCT-TSKQLLK 556
L K F H+ F+L+ V + L+ +++ C VL + L E + SK+ K
Sbjct: 1272 LFKAFDHTNKPMFALSLVTRSSELKSKKQKIICEFVLSDSTKPLIEKFYSVSLNSKRYSK 1331
Query: 557 D 557
D
Sbjct: 1332 D 1332
Score = 37 (18.1 bits), Expect = 5.7e-41, Sum P(4) = 5.7e-41
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 1204 DAYWVRELNNMYVQKRGQ 1221
D+Y + LNN+ +Q+ Q
Sbjct: 1945 DSYLKKVLNNLEIQEISQ 1962
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 458 (166.3 bits), Expect = 1.3e-40, Sum P(4) = 1.3e-40
Identities = 114/304 (37%), Positives = 180/304 (59%)
Query: 548 CTTSKQL-LKDFCFKRASLFFSTASSS-YKLHSVKIEPLNFLVIDEAAQLKESESTIPLQ 605
C +++L K + +S+ FST S+S L +P N +++DEA Q E+ IPL
Sbjct: 3656 CVFNRRLDEKKMILEHSSICFSTLSASGSNLVQSSFKP-NVVIVDEATQSCETSCIIPLS 3714
Query: 606 LAG--INHAVLIGDECQLPAMVESKISDGASFGRSLFERLT-LLNHSKHLLDIQYRMHPS 662
L + +L+GD QLP + SK S G SLFERL+ +L S +L++QYRMHP
Sbjct: 3715 LGAKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKVLPVS--MLNVQYRMHPL 3772
Query: 663 ISLFPNLQFYRNQILDGANV-KSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSCRNMV 721
IS FP+ QFY + + DG NV S +Y + ++G F ++ REE S +N +
Sbjct: 3773 ISKFPSSQFYHDILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQL 3832
Query: 722 EVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD-GFTVKVKSV 780
E+++V +++KL + +KQ S G+V+PY Q RK+I Y+ + +++K++
Sbjct: 3833 EITMVFTLIKKLTQDHPETKQY-SFGIVTPYKLQ----RKEIEDAYKQLNLSLNIEIKTI 3887
Query: 781 DGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
D FQG E+DI+I+S VR SIGF+S+ +R+NV++TRA++ L+I+GN TL+ + W
Sbjct: 3888 DSFQGSEKDIMIMSCVR---NESIGFLSDRRRINVSITRAKYGLFIIGNA-TLLKLDRTW 3943
Query: 841 GTLV 844
G L+
Sbjct: 3944 GELI 3947
Score = 112 (44.5 bits), Expect = 1.3e-40, Sum P(4) = 1.3e-40
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 247 SSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIK--CRTLA 304
+ TLNE Q+ A+ L H S + L GPPGTGKT T++ L+ +L I + L
Sbjct: 3553 NQTLNESQLAAINESLV-----HSS-ITLIQGPPGTGKTHTITSLISIILAINPDFKILV 3606
Query: 305 CTPTNVAITELASRAL 320
C P++ A+ E+A R +
Sbjct: 3607 CGPSHAAVDEVAKRVI 3622
Score = 79 (32.9 bits), Expect = 9.0e-39, Sum P(3) = 9.0e-39
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 387 MIDLLEDCVSQYHIYVEKLKERED-CNENQSEEKKCRKETEGSKGECKPFLEYVRESFNC 445
MID ++ C+ Y Y+ LK +D N E ++ + + + L V F+
Sbjct: 2019 MIDSIDSCIGLYPNYLPSLKYLKDFINNYPMEFREYSMKLVVQRERTRMDLRKVLGDFSN 2078
Query: 446 AVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLLDSFRS 486
++ P I HL +T I N+F + LK +DS S
Sbjct: 2079 SLNPQIYKEIIAHAHLHRTLIEFNNFFQRMHLKEFMDSISS 2119
Score = 52 (23.4 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 471 FQDMVA---LKSLLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRR 527
+++++A L L F + FQ+ + E ++ + S+ ++ + V +R L +H +
Sbjct: 2085 YKEIIAHAHLHRTLIEFNNF-FQRMHLKEFMDSISSYGQNDQVDESDVSRR-LNNVHSK- 2141
Query: 528 SECLSVLRNLWNSLDELNLPCTTSKQLLKDFCF 560
+ L + R L E++ T+ L+KDF F
Sbjct: 2142 -QILDISRYL-----EMSATVDTNVNLIKDFIF 2168
Score = 44 (20.5 bits), Expect = 1.3e-40, Sum P(4) = 1.3e-40
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 1081 MNQQFIDSKRHQNIRGEILSSR-MILDFHLHSNASTYHWEDEL 1122
+N I++ R Q I+ ++++ + +I DF + ++ + H +EL
Sbjct: 3959 INSNDIENLREQTIQFDLINPQGLITDFG-NDDSDSEHGSEEL 4000
Score = 38 (18.4 bits), Expect = 1.3e-40, Sum P(4) = 1.3e-40
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 35 LFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRS 71
L + + K+ + +++ +Y SF L+EE R L +
Sbjct: 3327 LQSNNIVKLLDCYENHMEYKNSFKPILVEEFRKTLET 3363
Score = 38 (18.4 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 387 MIDLLEDCVSQYHIYVEKLK 406
M+ ++ED +S+Y + ++L+
Sbjct: 21 MVTIVEDIISKYPDFNDELE 40
Score = 37 (18.1 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 33/173 (19%), Positives = 72/173 (41%)
Query: 334 NTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSGWRHCFSSMIDLLED 393
+TP P+ + + +++ + + I+ DY+V R+++ + S + ++++
Sbjct: 1655 STPIEPITQEGIVNSVNKIGI---LKTIFKDYKVSRIIQTLEEMVRVYPQHSDTLLVIKE 1711
Query: 394 CVSQYHIYVEKLKEREDC-NENQSEE-KKCRK-ETEGSKGECKPFLEYV--RESFNCAVI 448
+ + + D EN E KK E E + +Y+ R C I
Sbjct: 1712 IMMGKEDGKKDFSYKTDIYKENAIREFKKIMGFENEQQIIDSDIIRKYIAFRVFIECCRI 1771
Query: 449 PLRNCIFIFCT-HLPKTYISENSFQDMVALKSLLD-SFRSLLFQ---KNVVSE 496
R C+ L + + F ++ +L + + SF+ ++F+ KN+ SE
Sbjct: 1772 YQRKCLKEAAQITLINSAKKQTFFAELCSLHNNANVSFKDIIFKEYNKNISSE 1824
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 456 (165.6 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 133/408 (32%), Positives = 218/408 (53%)
Query: 484 FRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDE 543
+ S++ +++ + E+LEK S ++ S+ R + + + L +R S +
Sbjct: 1414 YDSIIKKRDSLREDLEKF--RSTGKNSSILEAQLREITKQKNMLEQSLDDMRERQRSTNR 1471
Query: 544 LNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEP-LNF--LVIDEAAQLKESES 600
NL K+ +++ + A + +T S+S H + + L F ++IDEAAQ E S
Sbjct: 1472 -NLDVL--KKQIQNQLLQEADIVCATLSASG--HELLLNAGLTFRTVIIDEAAQAVELSS 1526
Query: 601 TIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL-NHSKHLLDIQYRM 659
IPL+ G V++GD QLP V SK S + +SL+ R+ N S LL IQYRM
Sbjct: 1527 IIPLKY-GCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRM 1585
Query: 660 HPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYH-SCR 718
+P IS FP+ FY +++LDG N+ + + + + + G Y F N+ G E F S
Sbjct: 1586 NPEISRFPSKFFYNSKLLDGPNMSAVT-SRPWHEDPQLGIYRFFNV-HGTEAFSNSKSLY 1643
Query: 719 NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVK 778
N+ E S ++ + ++L + ++ IGVV+PY +QV +R + +Y + + +
Sbjct: 1644 NVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIH 1703
Query: 779 SVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSES 838
+VDGFQG E+DIII S VR + G IGF+ + +R+NVALTRA+ L+I+GN + L+ E
Sbjct: 1704 TVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQ-ED 1762
Query: 839 IWGTLVCDAKARQCFFKADEDRNLAKARLEVSKESVEIDAESLTSRSQ 886
I+ +L+ DAK R + D N K +S S + + +L S+
Sbjct: 1763 IFYSLIEDAKTRGVW--RDLSANQFKNSKSISNVSTHLASNNLNLASR 1808
Score = 78 (32.5 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 239 DEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL 296
D+K S +NEPQ A++A G L GPPGTGKTKT+ ++ ++L
Sbjct: 1260 DKKQKIMKSYGVNEPQAYAIYAS------SVNDGFTLIQGPPGTGKTKTILGMIGAVL 1311
Score = 45 (20.9 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 299 KCRTLACTPTNVAITELASR 318
K + L C P+N AI E+ R
Sbjct: 1331 KNKILICAPSNAAIDEILLR 1350
Score = 39 (18.8 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 17/74 (22%), Positives = 32/74 (43%)
Query: 448 IPLRNCIFIFCTHLPKTYIS--ENSFQDMVAL--KSL------LDSFRSLL-----FQKN 492
+ +R C+F+F Y+ + + + L K + LD F+SL F N
Sbjct: 54 VAVRECLFLFSFQNDNEYLVWFKKHLNERLQLCPKCIVKYHQSLDDFKSLCLNIFHFDPN 113
Query: 493 VVSEELEKLFSHSV 506
+ +EK++S +
Sbjct: 114 TLEIVMEKIYSWDI 127
Score = 37 (18.1 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 351 RLKVNPGFEEIY 362
RL++NP +E Y
Sbjct: 1052 RLRLNPDVQEFY 1063
Score = 37 (18.1 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 409 EDCNENQSEEKKCRKETEGSKG 430
+D N + S+E E E S G
Sbjct: 978 DDKNTSTSDEDTSESEEESSNG 999
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 416 (151.5 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 109/297 (36%), Positives = 164/297 (55%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDGASFGRSLFERLTL 645
++IDE+ Q E E IP+ + G +L+GD QL P +++ K +D A +SLFERL
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAAD-AGLKQSLFERLVF 659
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFG-PYTF-I 703
L H L++QYRMHP +S FP+ FY + +G + E+ P P F
Sbjct: 660 LGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWA 719
Query: 704 NIIGGREEFIY--HSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVA 758
N GREE +S N VE V KI+ KL+K + +Q IGV++PY Q +V
Sbjct: 720 NY--GREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQ 774
Query: 759 IRKKIGSEYENKDGF-TVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVAL 817
+ + +D + V++ SVD FQG E+D II+S VR N SIGF+S+P+R+NVAL
Sbjct: 775 FMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVAL 834
Query: 818 TRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSKESV 874
TRA++ L ILGN R+L + +W L+ + + C D NL + ++++ ++
Sbjct: 835 TRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD-NLQLSMVQLNTNNM 889
Score = 111 (44.1 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 240 EKFG-PSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI 298
+KF P L+ LN Q AV L+R + L GPPGTGKT T + +++ L ++
Sbjct: 431 KKFSHPKLTE-LNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKL 482
Query: 299 -KCRTLACTPTNVAITELASR 318
K + L C P+NVA+ LA++
Sbjct: 483 NKQKILVCAPSNVAVDHLAAK 503
Score = 37 (18.1 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 859 DRNLAKARLEVSKESVEIDAESLTSRSQRG 888
D+N R ++E D +S+TS G
Sbjct: 987 DKNYGGGRYTNDGNNIEDDIKSITSTFAAG 1016
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 416 (151.5 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 109/297 (36%), Positives = 164/297 (55%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDGASFGRSLFERLTL 645
++IDE+ Q E E IP+ + G +L+GD QL P +++ K +D A +SLFERL
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAAD-AGLKQSLFERLVF 659
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFG-PYTF-I 703
L H L++QYRMHP +S FP+ FY + +G + E+ P P F
Sbjct: 660 LGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWA 719
Query: 704 NIIGGREEFIY--HSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVA 758
N GREE +S N VE V KI+ KL+K + +Q IGV++PY Q +V
Sbjct: 720 NY--GREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQ 774
Query: 759 IRKKIGSEYENKDGF-TVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVAL 817
+ + +D + V++ SVD FQG E+D II+S VR N SIGF+S+P+R+NVAL
Sbjct: 775 FMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVAL 834
Query: 818 TRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSKESV 874
TRA++ L ILGN R+L + +W L+ + + C D NL + ++++ ++
Sbjct: 835 TRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD-NLQLSMVQLNTNNM 889
Score = 111 (44.1 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 240 EKFG-PSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI 298
+KF P L+ LN Q AV L+R + L GPPGTGKT T + +++ L ++
Sbjct: 431 KKFSHPKLTE-LNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKL 482
Query: 299 -KCRTLACTPTNVAITELASR 318
K + L C P+NVA+ LA++
Sbjct: 483 NKQKILVCAPSNVAVDHLAAK 503
Score = 37 (18.1 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 859 DRNLAKARLEVSKESVEIDAESLTSRSQRG 888
D+N R ++E D +S+TS G
Sbjct: 987 DKNYGGGRYTNDGNNIEDDIKSITSTFAAG 1016
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 410 (149.4 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 111/279 (39%), Positives = 155/279 (55%)
Query: 582 EPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFE 641
EP + ++IDEA+Q KE+E+ IP+ L +L+GD QLP V S+ + F +SL
Sbjct: 1953 EPFSCVIIDEASQAKETETLIPM-LYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMA 2011
Query: 642 RLTLLNHSKH-------LLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG 694
RL H + LL +QYRMHP I FP+ Y + + + K + P
Sbjct: 2012 RLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDCETAQKRCSLSW-P- 2069
Query: 695 TEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTA 754
F PY +++ GRE S N EVS+V +L+ L K +Q V +GV++PY A
Sbjct: 2070 --FKPYKVFDVMDGRETKERDSFINHKEVSLVGLLLKLLCK-----EQAVRVGVITPYNA 2122
Query: 755 QVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTG-GSIGFISNPQRV 813
Q I I + NK V+V +VDGFQG E D II+S VR ++ GSIGF+ N QR+
Sbjct: 2123 QKHRILDAIKTSGINKQ-LQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRM 2181
Query: 814 NVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQC 852
NV +TRA+ L+ILG+ RTL +S WG L+ DA R+C
Sbjct: 2182 NVTITRAKFSLFILGHLRTL-REQSDWGALIEDAGRREC 2219
Score = 124 (48.7 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 278 GPPGTGKTKTVSMLLFSLLRI----------------KCRTLACTPTNVAITELASRALR 321
GPPGTGK+KT+ LL+ LL + R L C P+N AI L + +
Sbjct: 1744 GPPGTGKSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRVLLCAPSNAAIDSLMKKVIL 1803
Query: 322 LVKESYKRDSRN-NTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVK-RLMECFAPLSG 379
+ KE RN N P GDI L + ++ + LD++ K R +
Sbjct: 1804 IFKEK----CRNINAPQGNCGDINLVRLGNERTISKSLKPFSLDHQTKARAQRAQQTVES 1859
Query: 380 WRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRKETEGSKGECKPFLEYV 439
H +D + + +S H + K + ++K+ KE EG + K
Sbjct: 1860 DVHRRKEQLDQMIENLS--HQCAKTQKNSTEFKNLLEQKKQFLKEREGLSRQIKECRGRR 1917
Query: 440 RESFNCAVIPLRNCIFIFCT-HLPKTYISENSFQ 472
+ES + L+N I CT + + EN+F+
Sbjct: 1918 QES---QALVLQNAHVICCTLSTSGSIVLENAFR 1948
Score = 45 (20.9 bits), Expect = 1.9e-39, Sum P(3) = 1.9e-39
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 40 VEKIPESFQSVKQYFGSFVFPLL 62
++++P +F S +YF + ++PLL
Sbjct: 1520 LKEVPVNFSSYLEYFNT-LYPLL 1541
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 439 (159.6 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 106/276 (38%), Positives = 160/276 (57%)
Query: 578 SVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGR 637
S+++E ++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + + +
Sbjct: 1569 SLQVE-FETVIIDEAAQCVELSALIPLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQ 1626
Query: 638 SLFERLTLLNHSK-HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTE 696
SLF R+ + K HLLD QYRMHP ISL+P+ +FY + DG+++ +K ++ +
Sbjct: 1627 SLFVRMQQNHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDM-AKLRQQPWHDNPL 1685
Query: 697 FGPYTFINIIGGREEFIY-HSCRNMVEVSVVIKILQKLYKAWVGSKQMVS-IGVVSPYTA 754
GPY F ++ G +E S N E++V I+I K + S M IG+++PY A
Sbjct: 1686 LGPYRFFDVEGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKA 1745
Query: 755 QVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVN 814
Q+ A+R+K + ++ + D FQG E +III S VR + G IGF+++ +R+N
Sbjct: 1746 QLFALRQKFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMN 1805
Query: 815 VALTRARHCLWILGNERTLISSESIWGTLVCDAKAR 850
V LTRAR LWILG+ R L E W L+ D+KAR
Sbjct: 1806 VGLTRARSSLWILGDSRALRQGE-FWNKLIEDSKAR 1840
Score = 82 (33.9 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 41/145 (28%), Positives = 59/145 (40%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACT--- 306
LN Q A+ ++ G L GPPGTGKTKT+ ++ +LL K T
Sbjct: 1327 LNRGQAAAI------INAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIK 1380
Query: 307 PTNVAITELASRAL------RLVKESYKR------DSRNNTPFCPLGDILLFGNKDRLKV 354
P N A +A + L V E R D+ NT ++L G D +
Sbjct: 1381 PANGADEPMAQKLLVCAPSNAAVDELVLRLKAGIKDTNGNTHKI---NVLRLGRSDA--I 1435
Query: 355 NPGFEEIYLDYRVKRLMECFAPLSG 379
N ++ LD VK M+ ++G
Sbjct: 1436 NAAVRDVTLDELVKEKMDAALNVNG 1460
Score = 44 (20.5 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 240 EKFGPSLSSTLNEPQVGAVFACLRRLDC 267
++ GP SSTL + + AV A L C
Sbjct: 158 KEHGPMKSSTLTKKEPTAVVALYEALCC 185
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 403 (146.9 bits), Expect = 4.1e-39, Sum P(2) = 4.1e-39
Identities = 123/374 (32%), Positives = 190/374 (50%)
Query: 507 DEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS-KQLLKDF---CFKR 562
D + S++F+ ++++ E L+ L+ L + L EL+ KQL K
Sbjct: 532 DVESSVSFLALHEQVRMNDTNPE-LAKLQQLKSELGELSSQDEKKFKQLTKAAEREILSN 590
Query: 563 ASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 622
A + T + K++ N L IDE+ Q E E IPL L G VL+GD QL
Sbjct: 591 ADVVCCTCVGAGDPRLAKLKFRNVL-IDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLG 648
Query: 623 AMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANV 682
++ +K + A +SLFERL L + L++QYRMHP +S FP+ FY + +G +
Sbjct: 649 PVIMNKKAAKAGLNQSLFERLVKLGLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTI 708
Query: 683 KSKSYEKHYLPGTEFG-PYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGS 740
+ + P P F + +G E S N E S V K++ + +KA V
Sbjct: 709 QQRLRRDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNRTEASNVEKLVTRFFKAGV-- 766
Query: 741 KQMVSIGVVSPYTAQ---VVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVR 797
+ IGVV+PY Q +V+ + G+ ++ + V+V SVD FQG E+D I++S VR
Sbjct: 767 -KPGDIGVVTPYEGQRSYIVSTMQNTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVR 824
Query: 798 CNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKAD 857
N IGF+S+P+R+NVALTRA++ + I+GN + L S +W L+ + R+C
Sbjct: 825 SNESQGIGFLSDPRRLNVALTRAKYGVVIIGNPKVL-SKHELWHHLLIHFRDRKCLVDGP 883
Query: 858 EDRNLAKARLEVSK 871
NL + L+ SK
Sbjct: 884 LT-NLQASLLQFSK 896
Score = 109 (43.4 bits), Expect = 4.1e-39, Sum P(2) = 4.1e-39
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 240 EKF-GPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI 298
+KF P L LN Q+ A+ A L + + L GPPGTGKT T + +++ L ++
Sbjct: 442 KKFTAPGLPD-LNGSQISAIKAVL-------STPLSLIQGPPGTGKTVTSATIIYHLAKM 493
Query: 299 K-CRTLACTPTNVAITELASRALR 321
+ L C P+NVA+ +L R R
Sbjct: 494 NGSQVLVCAPSNVAVDQLCERVHR 517
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 460 (167.0 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 104/271 (38%), Positives = 160/271 (59%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1587 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1644
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-HYLPGTEFGPYTFINI 705
N S +LLD+QYRMHPSIS FP+ +FY+ ++ DG + + H L PY F +I
Sbjct: 1645 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLE--PLAPYKFFDI 1702
Query: 706 IGGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVS-IGVVSPYTAQVVAIRKK 762
I GR+E S NM E+ V I+++ L++ + IG++SPY Q+ +RK+
Sbjct: 1703 ISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKE 1762
Query: 763 IGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCN-TGGSIGFISNPQRVNVALTRAR 821
+ ++ ++DGFQG E++II+IS VR + T S+GF+ + +R+NVALTRA+
Sbjct: 1763 FARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAK 1822
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQC 852
+W+LG++R+L S+ +W L+ DAK R C
Sbjct: 1823 TSIWVLGHQRSLAKSK-LWRDLIEDAKDRSC 1852
Score = 72 (30.4 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 270 KSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKE 325
K G L GPPGTGKTKT+ ++ L K + V + + +S +L+K+
Sbjct: 1349 KEGFSLIQGPPGTGKTKTILGIIGYFLSTK-NASSSNVIKVPLEKNSSNTEQLLKK 1403
Score = 52 (23.4 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 295 LLRIKCRTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKV 354
LL+ K + L C P+N A+ E+ LRL Y + P ++ G D V
Sbjct: 1400 LLK-KQKILICAPSNAAVDEIC---LRLKSGVYDKQGHQFKP-----QLVRVGRSD--VV 1448
Query: 355 NPGFEEIYLDYRV-KRLME 372
N +++ L+ V KR+ E
Sbjct: 1449 NVAIKDLTLEELVDKRIGE 1467
Score = 38 (18.4 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 292 LFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKR-DSRNNTPFCPLGDILLFGNKD 350
LF++ + K + + N + + + A L K+ + R N PL +I+L +
Sbjct: 1068 LFAIAKAKGKGIQTVDINGKVVKRQTAA-ELAKQELEHMRKRLNVDMNPLYEIILQWDYT 1126
Query: 351 RLKVNPGFEEI--YLDYR 366
R P E I Y D +
Sbjct: 1127 RNSEYPDDEPIGNYSDVK 1144
Score = 37 (18.1 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 254 QVGAVFACLRRLDCDHKSGVEL 275
+V AVF LR + + +G+ +
Sbjct: 157 RVEAVFPILRNISVNDNTGINI 178
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 443 (161.0 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 121/367 (32%), Positives = 196/367 (53%)
Query: 496 EELEK-LFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL 554
+EL K L + S++E K + ++++RSE L N +++
Sbjct: 1447 DELRKRLATESLEEKEITELEEK--IRAINKKRSELAKKLDEQREKASIANRTKEINRRN 1504
Query: 555 LKDFCFKRASLFFSTAS-SSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAV 613
++ A + ST S S++ L + + ++IDEA Q E + IPL+ G +
Sbjct: 1505 IQARILSEAQVLCSTLSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRY-GCKKCI 1563
Query: 614 LIGDECQLPAMVESKISDGASFGRSLFERLTLLNH--SKHLLDIQYRMHPSISLFPNLQF 671
++GD QLP V S+ + ++ +SLF R+ NH S ++LD+QYRMHP IS FP+ +F
Sbjct: 1564 MVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK-NHPDSVYMLDVQYRMHPMISKFPSSEF 1622
Query: 672 YRNQILDGANVKSKSYEK-HYLPGTEFGPYTFINIIGGREEF-IYHSCRNMVEVSVVIKI 729
Y +++ DG + + H P PY F +I+G E+ + S N E V +++
Sbjct: 1623 YNSKLKDGDGMLELNTRPWHKDP--PLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQL 1680
Query: 730 LQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEED 789
KL + K IG++SPY Q+ I++ +Y + +VDGFQG E++
Sbjct: 1681 TDKLMQLLPQDKFSGKIGIISPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKE 1740
Query: 790 IIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKA 849
III+S VR + G++GF+S+ +R+NVALTRA+ LWILGN+ +L +E +W L+ DA
Sbjct: 1741 IIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILGNKDSLSRNE-VWKKLLTDAGE 1799
Query: 850 RQCFFKA 856
R C +A
Sbjct: 1800 RNCITQA 1806
Score = 65 (27.9 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 272 GVELRWGPPGTGKTKTVSMLL-FSLLRIK 299
G L GPPGTGKTKT+ ++ +SL + K
Sbjct: 1313 GFSLIQGPPGTGKTKTILGIVGYSLSQEK 1341
Score = 55 (24.4 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 299 KCRTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGF 358
K + L C P+N A+ EL LRL ++ + S + P ++ G D +N
Sbjct: 1360 KAKILICAPSNAAVDELV---LRL-RDGVRNSSGEHMPL----KVVRLGRSDA--INSSV 1409
Query: 359 EEIYLDYRVKRLME 372
++ L+ V + ++
Sbjct: 1410 RDLTLEELVDKELQ 1423
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 389 (142.0 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 105/283 (37%), Positives = 158/283 (55%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDGASFGRSLFERLTL 645
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D A +SLFERL
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFG-PYTF-I 703
L H L++QYRM+P +S FP+ FY + +G ++ ++ P G P F
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 704 NIIGGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRK 761
N GREE + S N +E +I+ KL++ V +Q IGV++PY Q I +
Sbjct: 687 NY--GREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQ 741
Query: 762 KIGSEYE-NKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTR 819
+ +KD + V+V SVD FQG E+D II+S VR N +IGF+ +P+R+NV LTR
Sbjct: 742 YMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTR 801
Query: 820 ARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNL 862
A++ L ILGN R+L + ++W L+ + + C + D NL
Sbjct: 802 AKYGLVILGNPRSL-ARNTLWNHLLIHFREKGCLVEGTLD-NL 842
Score = 112 (44.5 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN Q AV L+R + L GPPGTGKT T + +++ L +I K R L C P+
Sbjct: 409 LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPS 461
Query: 309 NVAITELASR----ALRLVKESYK--RDSRNNTPFCPLGDILLFGNKDRLK 353
NVA+ LA++ L++V+ + K D ++ L +++ G K LK
Sbjct: 462 NVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
Score = 38 (18.4 bits), Expect = 2.2e-30, Sum P(2) = 2.2e-30
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 406 KEREDCNENQSEEKKCRKETEGSKGECKPFLE 437
K RED + S G+KGE K L+
Sbjct: 485 KSREDVESSVSNLALHNLVGRGAKGELKNLLK 516
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 389 (142.0 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 106/299 (35%), Positives = 161/299 (53%)
Query: 580 KIEPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGR 637
++ L F ++IDE+ Q E E IPL L G VL+GD QL ++ +K + A +
Sbjct: 577 RLAKLKFRTVLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQ 635
Query: 638 SLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEF 697
SLFERL +L S L++QYRMHP +S FP+ FY + +G + + P
Sbjct: 636 SLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPIL 695
Query: 698 -GPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ 755
P F + +G E S N E + V KI+ + +KA V K IG+++PY Q
Sbjct: 696 DSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITPYEGQ 752
Query: 756 ---VVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQR 812
+V+ + G+ ++ + ++V SVD FQG E+D II+S VR N IGF+S+P+R
Sbjct: 753 RSYIVSSMQATGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRR 811
Query: 813 VNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+NVALTRA++ L ILGN + L S +W L+ K R + NL ++ ++ S+
Sbjct: 812 LNVALTRAKYGLVILGNPKVL-SKHPLWNCLLQHFKERHTLVEGPLS-NLQESLIQFSR 868
Score = 112 (44.5 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 228 ELCSLQRKGIWDEKFG-PSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTK 286
E+ + K +KF P L LN Q+ AV + L+R + L GPPGTGKT
Sbjct: 402 EVAAAPMKTQMPKKFSVPGLPE-LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTV 453
Query: 287 TVSMLLFSLLRIKC-RTLACTPTNVAITELASRALR 321
T + +++ L ++ + L C P+NVA+ +L R R
Sbjct: 454 TSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHR 489
Score = 37 (18.1 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 12/53 (22%), Positives = 19/53 (35%)
Query: 546 LPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKES 598
L C S + C + T + K P+ FL + E +L +S
Sbjct: 471 LVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDS 523
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 387 (141.3 bits), Expect = 7.3e-37, Sum P(2) = 7.3e-37
Identities = 103/290 (35%), Positives = 153/290 (52%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + A +SLFERL L
Sbjct: 653 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTL 711
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + P F +
Sbjct: 712 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQ 771
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V K++ K+ V Q IGV++PY Q +V
Sbjct: 772 LGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYIVNYMA 828
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
+ GS + ++V SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 829 RNGSLRQQLYK-EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 887
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + ILGN + L S + +W L+ K +C + + NL ++ ++ K
Sbjct: 888 YGIVILGNPKVL-SKQPLWNGLLTHYKEHECLVEGPLN-NLKQSMVQFQK 935
Score = 106 (42.4 bits), Expect = 7.3e-37, Sum P(2) = 7.3e-37
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 241 KFG-PSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI- 298
+FG P L LN QV AV + L++ + L GPPGTGKT T + +++ + +
Sbjct: 480 RFGVPGLPE-LNASQVNAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQG 531
Query: 299 KCRTLACTPTNVAITELASR 318
+ + L C P+NVA+ +LA +
Sbjct: 532 QGQVLVCAPSNVAVDQLAEK 551
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 408 (148.7 bits), Expect = 1.6e-36, Sum P(4) = 1.6e-36
Identities = 113/309 (36%), Positives = 165/309 (53%)
Query: 564 SLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPA 623
+L FS AS K+ + ++IDEAAQ E+ + IP+Q G VL+GD QLPA
Sbjct: 569 TLSFSGASLLTKMAG----GFDIVIIDEAAQAVETSTLIPIQ-HGCKKVVLVGDPKQLPA 623
Query: 624 MVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVK 683
+ S ++ + +SLF+RL N S H+L QYRMH I FP+ FY++ +LDG N+
Sbjct: 624 TIISPLAIKYKYDQSLFQRLQEKN-SPHMLTTQYRMHSLIRAFPSRHFYQDLLLDGPNIP 682
Query: 684 SKSYEKHYLPGTEFGPYTFINII-------GGREEFIYHSCRNMVEVSVVIKILQKLYKA 736
S++ HY FGP F ++ GG F H C+ + + ++ K+Y
Sbjct: 683 SRA--THYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECKMAM---YLFQLFTKVYP- 736
Query: 737 WVGSKQMVS-IGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
+ S IG++SPY QV+A+R+ ++N G + + +VDGFQG E +III S
Sbjct: 737 ---DEDFASRIGIISPYRQQVLALREI----FKNYPG--ISIDTVDGFQGREREIIIFSC 787
Query: 796 VRC--NTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCF 853
VR G IGF+S+ +R+NVALTR R L ILGN + L S W L+ + Q
Sbjct: 788 VRAPVEEGAGIGFLSDVRRMNVALTRPRSSLLILGNTKAL-SINKDWNELIQHTQNNQQL 846
Query: 854 FKADEDRNL 862
+D+ L
Sbjct: 847 IPVTKDQPL 855
Score = 68 (29.0 bits), Expect = 1.6e-36, Sum P(4) = 1.6e-36
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 247 SSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL 296
SST N+ Q+ A+ + L + + L GPPGTGKT + L+ LL
Sbjct: 332 SSTYNDSQLNALTSALEG------NAITLIQGPPGTGKTHVILGLISVLL 375
Score = 57 (25.1 bits), Expect = 1.6e-36, Sum P(4) = 1.6e-36
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 299 KCRTLACTPTNVAITELASRALR 321
K R L C P+N A+ E+ SR +R
Sbjct: 461 KRRILLCAPSNGAVDEIVSRLIR 483
Score = 44 (20.5 bits), Expect = 1.6e-36, Sum P(4) = 1.6e-36
Identities = 16/79 (20%), Positives = 30/79 (37%)
Query: 38 DQVEKIPESFQSVKQYFGSFVFPLLEETR-MQLRSGLEAMRRAPYAEVIAFEELKPYGAN 96
D K E + K+ P+ E+ R + L +E + + +K A
Sbjct: 207 DDPNKTTEDIKKKKKVIPPSKTPITEQNRTLHLIGTVEHLDNGGIKVKFYVKGIKGDRAR 266
Query: 97 RYGI----EVDYWRNTICN 111
+ + E+D+W +CN
Sbjct: 267 QVSLLLRYEIDWWTTKLCN 285
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 431 (156.8 bits), Expect = 4.1e-36, P = 4.1e-36
Identities = 126/387 (32%), Positives = 200/387 (51%)
Query: 472 QDMVALKSL--LDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSE 529
Q + L SL L +R + EELEK + D +GK +++++
Sbjct: 1258 QGAIDLGSLQELTRWRDTFYDCIQKIEELEKQIDVARDVAEDTKSLGKELQNKINEKNLA 1317
Query: 530 CLSVLRNLWNSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHS-VKIEPLNF-- 586
V L + N ++ + K+A + +T S S H V LNF
Sbjct: 1318 EQKV-EELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSG--HDLVAHSSLNFST 1374
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDEAAQ E ++ IPL+ G +L+GD QLP V SK + ++ +SLF R+
Sbjct: 1375 VIIDEAAQAVELDTIIPLRY-GAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQK- 1432
Query: 647 NHSKH--LLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFIN 704
N S LL IQYRMHP IS FP+ +FY +++ DG N+ K+ + ++ +F Y +
Sbjct: 1433 NFSNQMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHV-NPKFTQYRLFD 1491
Query: 705 IIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIG 764
+ G S N+ EV ++ ++ +L + IGV++PY +Q+ +R+
Sbjct: 1492 VRGKERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFK 1551
Query: 765 SEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCL 824
+Y T+ +++VDGFQG E+DII S V+ + IGF+ + +R+NVALTRAR L
Sbjct: 1552 VKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSL 1611
Query: 825 WILGNERTLISSESIWGTLVCDAKARQ 851
I+GN TL ++ +WG+LV DA +R+
Sbjct: 1612 LIIGNMETL-KTDDLWGSLVDDALSRK 1637
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 384 (140.2 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 103/290 (35%), Positives = 157/290 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V KI KL KA G+K IG+++PY Q +V +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 814
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 815 FSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 873
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 874 YGVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSK 921
Score = 94 (38.1 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L R L C P+
Sbjct: 477 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 529
Query: 309 NVAITELASR 318
N+A+ +L +
Sbjct: 530 NIAVDQLTEK 539
Score = 38 (18.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 539 NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKES 598
+SL ++N + + L++D CF S S +L + +I ++E + S
Sbjct: 212 SSLKDINWDSSQWQPLIQDRCF--LSWLVKIPSEQEQLRARQITAQQINKLEELWKENPS 269
Query: 599 ESTIPLQLAGIN 610
+ L+ G++
Sbjct: 270 ATLEDLEKPGVD 281
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 378 (138.1 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 102/267 (38%), Positives = 145/267 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDGASFGRSLFERLTL 645
++IDE+ Q E E IPL + G +L+GD QL P ++ K+ D A +SLFERL
Sbjct: 703 ILIDESTQASEPECLIPLMM-GAKQVILVGDHRQLGPVLLCKKVVD-AGLSQSLFERLIS 760
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKHYLPGTEFGPYTFIN 704
L H L IQYRMHPS++ FP+ Y Q++ ++ S K P + P F N
Sbjct: 761 LGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPK-DPMFFFN 819
Query: 705 IIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKI 763
G E S N E S+ KI+ K + +GS IG+++PY Q I +
Sbjct: 820 CTGSEEISSSGTSFINTTEASICEKIVTKFLE--LGSLPG-QIGIITPYEGQRAYITSHM 876
Query: 764 GSEYE-NKDGF-TVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
+ N + + +++V SVD FQG E+D II+S VR N IGF+ +P+R+NVALTRAR
Sbjct: 877 QKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRAR 936
Query: 822 HCLWILGNERTLISSESIWGTLVCDAK 848
L ILGN + L S + +W +L+ K
Sbjct: 937 FGLIILGNAKVL-SKDPLWNSLISHFK 962
Score = 101 (40.6 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR-IKC--RTLACT 306
LNE Q+ AV L + + L GPPGTGKT S ++ L++ +K + L CT
Sbjct: 537 LNESQISAVNKVLT-------APLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCT 589
Query: 307 PTNVAITELASR----ALRLVKESYK 328
P+NVAI +L + L++V+ S K
Sbjct: 590 PSNVAIDQLTGKLHEIGLKVVRLSSK 615
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 377 (137.8 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 106/334 (31%), Positives = 174/334 (52%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY-LPGTEFGPYTFINI 705
L++QYRMHP +S FP+ FY + +G + + + + P E P F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPE-RPMFFL-V 730
Query: 706 IGGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIR 760
G+EE S N E + V KI + KA + +Q IG+++PY Q +V
Sbjct: 731 TQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYM 787
Query: 761 KKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRA 820
+ GS + +++ SVD FQG E+DIII+S VR N IGF+++P+R+NVALTRA
Sbjct: 788 QYQGSLHSRLYQ-EIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRA 846
Query: 821 RHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSKESVEIDAES 880
+ + I+GN + L + + +W L+ K R+ + + NL ++ + K +++ +
Sbjct: 847 KFGIIIVGNPKVL-AKQQLWNHLLNFYKDRKVLVEGSLN-NLKESLIHFQKPKKLVNSMN 904
Query: 881 LTSRSQRGKLCYKPKYEKTTLCYDKDGETYWEGR 914
+ + + + YD+ G Y +GR
Sbjct: 905 IGAHFMSTIIADAKEVMVPGSIYDRSGG-YGQGR 937
Score = 100 (40.3 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRT-LACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L+++ T L C P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 309 NVAITELASRALR 321
N A+ +L + R
Sbjct: 505 NTAVDQLTEKIHR 517
Score = 39 (18.8 bits), Expect = 7.4e-29, Sum P(2) = 7.4e-29
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 539 NSLDELNLPCTTSKQLLKDFCF 560
NSL ++N K L+ D CF
Sbjct: 194 NSLKDMNWDQEQWKPLIADRCF 215
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 381 (139.2 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 103/290 (35%), Positives = 157/290 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 632 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 690
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 691 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 750
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V KI KL KA G+K IG+++PY Q +V +
Sbjct: 751 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 807
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 808 FSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 866
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 867 YGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 914
Score = 94 (38.1 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L R L C P+
Sbjct: 470 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 522
Query: 309 NVAITELASR 318
N+A+ +L +
Sbjct: 523 NIAVDQLTEK 532
Score = 38 (18.4 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 539 NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKES 598
+SL ++N + + L++D CF S S +L + +I ++E + S
Sbjct: 216 SSLKDINWDSSQWQPLIQDRCF--LSWLVKIPSEQEQLRARQITAQQINKLEELWKENPS 273
Query: 599 ESTIPLQLAGIN 610
+ L+ G++
Sbjct: 274 ATLEDLEKPGVD 285
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 381 (139.2 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 103/290 (35%), Positives = 157/290 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 642 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 700
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 701 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 760
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V KI KL KA G+K IG+++PY Q +V +
Sbjct: 761 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 817
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 818 FSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 876
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 877 YGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 924
Score = 94 (38.1 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L R L C P+
Sbjct: 480 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 532
Query: 309 NVAITELASR 318
N+A+ +L +
Sbjct: 533 NIAVDQLTEK 542
Score = 38 (18.4 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 539 NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKES 598
+SL ++N + + L++D CF S S +L + +I ++E + S
Sbjct: 215 SSLKDINWDSSQWQPLIQDRCF--LSWLVKIPSEQEQLRARQITAQQINKLEELWKENPS 272
Query: 599 ESTIPLQLAGIN 610
+ L+ G++
Sbjct: 273 ATLEDLEKPGVD 284
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 381 (139.2 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 103/290 (35%), Positives = 157/290 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 643 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 701
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 702 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 761
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V KI KL KA G+K IG+++PY Q +V +
Sbjct: 762 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 818
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 819 FSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 877
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 878 YGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 925
Score = 94 (38.1 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L R L C P+
Sbjct: 481 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 533
Query: 309 NVAITELASR 318
N+A+ +L +
Sbjct: 534 NIAVDQLTEK 543
Score = 38 (18.4 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 539 NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKES 598
+SL ++N + + L++D CF S S +L + +I ++E + S
Sbjct: 216 SSLKDINWDSSQWQPLIQDRCF--LSWLVKIPSEQEQLRARQITAQQINKLEELWKENPS 273
Query: 599 ESTIPLQLAGIN 610
+ L+ G++
Sbjct: 274 ATLEDLEKPGVD 285
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 381 (139.2 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 103/290 (35%), Positives = 157/290 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 762
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V KI KL KA G+K IG+++PY Q +V +
Sbjct: 763 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 819
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 820 FSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 878
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 879 YGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 926
Score = 94 (38.1 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L R L C P+
Sbjct: 482 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 534
Query: 309 NVAITELASR 318
N+A+ +L +
Sbjct: 535 NIAVDQLTEK 544
Score = 38 (18.4 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 539 NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKES 598
+SL ++N + + L++D CF S S +L + +I ++E + S
Sbjct: 217 SSLKDINWDSSQWQPLIQDRCF--LSWLVKIPSEQEQLRARQITAQQINKLEELWKENPS 274
Query: 599 ESTIPLQLAGIN 610
+ L+ G++
Sbjct: 275 ATLEDLEKPGVD 286
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 381 (139.2 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 103/290 (35%), Positives = 157/290 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 645 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 703
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 704 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 763
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V KI KL KA G+K IG+++PY Q +V +
Sbjct: 764 QGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 820
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 821 FSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 879
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 880 YGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 927
Score = 94 (38.1 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L R L C P+
Sbjct: 483 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 535
Query: 309 NVAITELASR 318
N+A+ +L +
Sbjct: 536 NIAVDQLTEK 545
Score = 38 (18.4 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 539 NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKES 598
+SL ++N + + L++D CF S S +L + +I ++E + S
Sbjct: 218 SSLKDINWDSSQWQPLIQDRCF--LSWLVKIPSEQEQLRARQITAQQINKLEELWKENPS 275
Query: 599 ESTIPLQLAGIN 610
+ L+ G++
Sbjct: 276 ATLEDLEKPGVD 287
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 378 (138.1 bits), Expect = 7.8e-35, Sum P(2) = 7.8e-35
Identities = 102/290 (35%), Positives = 157/290 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDE+ Q E E +P+ L G +L+GD CQL +V K + A +SLFERL +L
Sbjct: 613 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 671
Query: 647 NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 672 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVT 731
Query: 707 GGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVAIRK 761
G+EE S N E + V KI +L KA G+K IG+++PY Q +V +
Sbjct: 732 QGQEEIASSGTSYLNRTEAANVEKITTRLLKA--GAKPD-QIGIITPYEGQRSYLVQYMQ 788
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVALTRAR
Sbjct: 789 FSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 847
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 848 YGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 895
Score = 94 (38.1 bits), Expect = 7.8e-35, Sum P(2) = 7.8e-35
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPT 308
LN QV AV L+R + L GPPGTGKT T + +++ L R L C P+
Sbjct: 451 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 503
Query: 309 NVAITELASR 318
N+A+ +L +
Sbjct: 504 NIAVDQLTEK 513
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 375 (137.1 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 104/304 (34%), Positives = 167/304 (54%)
Query: 581 IEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLF 640
++P + +++DEA Q E E+ IPL + N VL+GD QLP ++S + +G+SL
Sbjct: 2195 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2253
Query: 641 ERL----------TLLNHSKHL-LDIQYRMHPSISLFPNLQFYRNQI-LDGANVKSKSYE 688
RL LL + L +QYRMHP I LFP+ Y + D A +++
Sbjct: 2254 ARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSS 2313
Query: 689 KHYLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGV 748
+ P F PY ++ G EE S N EV +V++I++ + K + IG+
Sbjct: 2314 EW--P---FQPYLVFDVGDGHEERDKDSFSNPQEVKLVLEIIRTI-KEKRKDLGLRRIGI 2367
Query: 749 VSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTG-GSIGFI 807
++PY+AQ I++++ ++N +V +VD FQG E+D II++ VR N+ GSIGF+
Sbjct: 2368 ITPYSAQKKKIQEELDRVFKNNS--PGEVDTVDAFQGREKDCIIVTCVRANSSKGSIGFL 2425
Query: 808 SNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARL 867
++ QR+NV +TRAR L+ILG +TL+ ++ W L+ DA+ R K D++ K L
Sbjct: 2426 ASLQRLNVTITRARFSLFILGRLKTLMENKD-WNKLIQDAQRRGAIIKTS-DKSYKKDAL 2483
Query: 868 EVSK 871
++ K
Sbjct: 2484 KILK 2487
Score = 96 (38.9 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 38/110 (34%), Positives = 49/110 (44%)
Query: 278 GPPGTGKTKTVSMLLFSLLR--------------IKC-RTLACTPTNVAITELASRALRL 322
GPPGTGK+KT+ LL +LR IK R L C P+N AI EL + +
Sbjct: 1987 GPPGTGKSKTIVGLLSRVLRENTRNEKTSKKNAKIKQNRFLVCAPSNAAIDELMKKIIIA 2046
Query: 323 VKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLME 372
KE K +R P GDI L +N LD +V+ M+
Sbjct: 2047 FKE--KCQNRQE-PLGNCGDIKLVRLGAERSINSEVRAFSLDKQVEHRMK 2093
Score = 54 (24.1 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 12 KKAVGFTGHTVFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVFPLL 62
K+ + +T + +F+ S++ +L + V +P FQ YF +F FPL+
Sbjct: 1727 KEVLKWT-YEMFANSIQFGPPSTLVQSVVASVPIRFQGYNDYFNTF-FPLM 1775
Score = 42 (19.8 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 403 EKLKEREDCNENQSEEKKCRKET 425
+ +K++ C++ S EK+ K+T
Sbjct: 1398 KSVKQKAKCSDQPSVEKQREKQT 1420
Score = 40 (19.1 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 391 LEDCVSQYHIYVEKLKEREDCNENQSEEKKC 421
LEDC SQY + ++ + Q ++ C
Sbjct: 1087 LEDCDSQYFEFETEIDVFSVWQDTQEYKQDC 1117
Score = 38 (18.4 bits), Expect = 7.1e-26, Sum P(3) = 7.1e-26
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 294 SLLRIKCRTLACTPTNVAITELASRALRLVKES 326
+L +KC+ CT I + SR L ES
Sbjct: 1564 TLTVVKCKYKDCTEKVKKIGDCCSRHLATNSES 1596
Score = 37 (18.1 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 448 IPLRN--CIFIFCTHLPKTYISENSFQ 472
IP R C +++P+ YIS N Q
Sbjct: 1662 IPTRKQTCRTPSSSNIPQPYISNNVLQ 1688
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 350 (128.3 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 97/301 (32%), Positives = 159/301 (52%)
Query: 583 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFER 642
P + +++DEA Q E E+ PL + N +L+GD QLP V S + + +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 643 LT-LLNHS-KH---------LLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
LL + +H L +QYRMHP I LFP+ Y + ++ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDW 2292
Query: 692 LPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSP 751
P F PY ++ G E S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2293 -P---FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGIITH 2347
Query: 752 YTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNT-GGSIGFISNP 810
Y AQ I+K + E++ K +V +VD FQG ++D +I++ VR N+ GSIGF+++
Sbjct: 2348 YKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASL 2405
Query: 811 QRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVS 870
QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R K D+N +++
Sbjct: 2406 QRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTC-DKNYRHDAVKIL 2463
Query: 871 K 871
K
Sbjct: 2464 K 2464
Score = 118 (46.6 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 51/166 (30%), Positives = 73/166 (43%)
Query: 278 GPPGTGKTKTVSMLLFSLL---------------RIKC-RTLACTPTNVAITELASRALR 321
GPPGTGK+KT+ LL+ LL +IK R L C P+N A+ EL + +
Sbjct: 1963 GPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIIL 2022
Query: 322 LVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSGWR 381
KE K D +N C GDI L +N + LD +V M+ P
Sbjct: 2023 EFKEKCK-DKKNPLGNC--GDINLVRLGPEKSINSEVLKFSLDSQVNHRMKKELPSHVQA 2079
Query: 382 -HCFSSMIDLLEDCVSQYHIYVEKLKE--REDCNENQSEEKKCRKE 424
H +D D +S+ +E R++ +EN S+ K R+E
Sbjct: 2080 MHKRKEFLDYQLDELSRQRALCRGGREIQRQELDENISKVSKERQE 2125
Score = 38 (18.4 bits), Expect = 7.2e-25, Sum P(2) = 7.2e-25
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 394 CVSQYHI--YVEKLKEREDCNENQSEEKKCRKETEGSKGECKPFLEYVRESFN 444
C+ + H +V + +E+ N + E+ + + E S +C F E E F+
Sbjct: 1040 CLEREHPEQHVSTVNSKEEKNPVKEEKTETLFQFEESDSQCFEF-ESSSEVFS 1091
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 365 (133.5 bits), Expect = 7.1e-33, Sum P(3) = 7.1e-33
Identities = 104/273 (38%), Positives = 150/273 (54%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDGASFGRSLFERLTL 645
++IDEA Q E E IPL L G VL+GD QL P ++ K++ AS +SLFERL +
Sbjct: 561 VLIDEATQASEPECMIPLVL-GAKQVVLVGDHQQLGPVVMNKKVAL-ASLSQSLFERLII 618
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY-LPGTE-FGPYTFI 703
L +S L +QYRMHP +S FP+ FY + +G S+ +H P + P F
Sbjct: 619 LGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTT-SERIARHVDFPWIQPDSPLMFY 677
Query: 704 NIIGGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---VVA 758
G +EE S N E S KI+ ++ V +Q IG+V+PY Q +V
Sbjct: 678 ANFG-QEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ---IGIVTPYDGQRSYIVQ 733
Query: 759 IRKKIGSEYENKDGF-TVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVAL 817
+ GS KD + V+V SVD FQG E+D II+S VR + IGF+++P+R+NVAL
Sbjct: 734 YMQNNGSM--QKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVAL 791
Query: 818 TRARHCLWILGNERTLISSESIWGTLVCDAKAR 850
TRA++ + +LGN + L + ++W V K +
Sbjct: 792 TRAKYGVIVLGNPKVL-AKHALWYHFVLHCKEK 823
Score = 94 (38.1 bits), Expect = 7.1e-33, Sum P(3) = 7.1e-33
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 244 PSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCR-- 301
P+L LN Q AV A L + + L GPPGTGKT T + +++ L ++ R
Sbjct: 388 PNLPK-LNASQSEAVRAVLSK-------PLSLIQGPPGTGKTVTSASVVYHLATMQSRKR 439
Query: 302 -----TLACTPTNVAITELASR----ALRLVKESYK--RDSRNNTPFCPL 340
L C P+NVA+ +LA + LR+V+ + K D ++ F L
Sbjct: 440 KSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSREDIESSVSFLSL 489
Score = 40 (19.1 bits), Expect = 7.1e-33, Sum P(3) = 7.1e-33
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 31 FNQSLFKDQVEK--IPESFQSV-KQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAEVIAF 87
+++ L + Q +K + Q++ K+Y F+ P LE ++L G E M+ E+ A
Sbjct: 237 YDKRLKESQTQKDVVVRWDQAINKRYTAWFLLPKLESGEIRLAIGDE-MKLTYEGELRA- 294
Query: 88 EELKPYGANRYGIEV 102
P+ + Y I++
Sbjct: 295 ----PWSSTGYVIKI 305
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 353 (129.3 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 96/291 (32%), Positives = 155/291 (53%)
Query: 583 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFER 642
P + +++DEA Q E E+ PL + N +L+GD QLP V S + + +S+ R
Sbjct: 2197 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2255
Query: 643 LTLL--NHSKH---------LLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
L ++ +H L +QYRMHP I LFP+ Y + ++ +
Sbjct: 2256 FYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDW 2315
Query: 692 LPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSP 751
P F PY ++ G E S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2316 -P---FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2370
Query: 752 YTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNT-GGSIGFISNP 810
Y AQ I+K + E++ K +V +VDGFQG ++D +I++ VR N GSIGF+++
Sbjct: 2371 YKAQKTMIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASL 2428
Query: 811 QRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRN 861
QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R K D+N
Sbjct: 2429 QRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKRGAIIKTC-DKN 2477
Score = 108 (43.1 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 49/166 (29%), Positives = 72/166 (43%)
Query: 278 GPPGTGKTKTVSMLLFSLL---------------RIKC-RTLACTPTNVAITELASRALR 321
GPPGTGK+KT+ LL+ LL +IK R L C P+N A+ EL + +
Sbjct: 1986 GPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIIL 2045
Query: 322 LVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSGWR 381
KE K D +N C GDI L +N + LD +V M+ P
Sbjct: 2046 EFKEKCK-DKKNPLGNC--GDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQE 2102
Query: 382 -HCFSSMIDLLEDCVSQYHIYVEKLKE--REDCNENQSEEKKCRKE 424
H +D D +S+ +E R++ +E ++ K R+E
Sbjct: 2103 MHRRKEFLDRQLDELSRQRALCRGGREIQRQELDEKIAKVSKERQE 2148
Score = 47 (21.6 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 20/113 (17%), Positives = 48/113 (42%)
Query: 495 SEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL 554
++ LEK+ + + D F +GK ++ ++ E + L ++ + L
Sbjct: 762 TDSLEKMSTSNEDFSFKDDVLGKTSKTKIKSQKDEICAKLSHVIKKQHRKSTFIDNIGNL 821
Query: 555 LKDFCFKRASLFFSTASSSYK-----LHSVKIEPLNFLVIDEAAQLKESESTI 602
++ F+S S + +HS+ ++P N ++ D+ + K +S +
Sbjct: 822 EENLTVSNVDNFYSRKESGDQKGDSFMHSLSLDP-NGILDDKNGEQKSHKSLL 873
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 351 (128.6 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 101/299 (33%), Positives = 154/299 (51%)
Query: 563 ASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 622
A + T SS+ KI L IDE+ Q E E + + + G+ VL+GD CQL
Sbjct: 584 ADVICCTCSSAADARLSKIRTRTVL-IDESTQATEPEILVSI-MRGVRQLVLVGDHCQLG 641
Query: 623 AMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANV 682
+V K + A +SLFERL LL L +QYRMHP +S FP+ FY + +G
Sbjct: 642 PVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTE 701
Query: 683 KSK---SYEKHYLPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWV 738
+ + H+ + P F + G E S N E + V K++ KL KA V
Sbjct: 702 NDRHMTGVDWHWPKPNK--PAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGV 759
Query: 739 GSKQMVSIGVVSPYTAQVVAIRKKIGSE--YENKDGFTVKVKSVDGFQGGEEDIIIISTV 796
Q IGV++ Y Q I + ++ +K V++ SVD FQG E+D II++ V
Sbjct: 760 QPHQ---IGVITSYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCV 816
Query: 797 RCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFK 855
R N IGF+S+P+R+NVA+TRA++ L ++GN + L + +W L+ K+++ ++
Sbjct: 817 RSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVL-ARHDLWHELINHYKSKEMLYE 874
Score = 91 (37.1 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL-RIKCRTLACTPT 308
LN Q+ AV L R + L GPPGTGKT + +++ L+ + + L C+P+
Sbjct: 446 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 498
Query: 309 NVAITELASR 318
N+A+ LA +
Sbjct: 499 NIAVDHLAEK 508
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 354 (129.7 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 102/312 (32%), Positives = 162/312 (51%)
Query: 583 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFER 642
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + +S+ R
Sbjct: 2168 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMAR 2226
Query: 643 L-TLLNHS-KH---------LLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
LL + +H L +QYRMHP I LFP+ Y + + ++ +
Sbjct: 2227 FYKLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASRCSSDW 2286
Query: 692 LPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSP 751
P F PY ++ G E S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2287 -P---FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2341
Query: 752 YTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTG-GSIGFISNP 810
Y AQ I+K + E++ K +V +VDGFQG ++D +I++ VR T GSIGF+++
Sbjct: 2342 YKAQKTLIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASL 2399
Query: 811 QRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVS 870
QR+NV +TRA++ L+ILG+ RTL ++ W L+ DA+ R K D+N ++
Sbjct: 2400 QRLNVTITRAKYSLFILGHLRTLRENDH-WNQLIEDAQKRGAIIKTC-DKNYRHDATKIL 2457
Query: 871 KESVEIDAESLT 882
K + SLT
Sbjct: 2458 KPKPVLQ-RSLT 2468
Score = 107 (42.7 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 39/111 (35%), Positives = 50/111 (45%)
Query: 278 GPPGTGKTKTVSMLLFSLL---------------RIKC-RTLACTPTNVAITELASRALR 321
GPPGTGK+KT+ LL+ LL +IK R L C P+N A+ EL + +
Sbjct: 1957 GPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIIL 2016
Query: 322 LVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLME 372
KE K D RN C GDI L +N LD +V M+
Sbjct: 2017 EFKEKCK-DKRNPLGNC--GDINLVRLGPEKSINNEVLRFSLDSQVNHRMK 2064
Score = 44 (20.5 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 42 KIPESFQSVKQYFGSFVFPLL 62
++P FQ YF F FPL+
Sbjct: 1727 RVPVRFQDCGDYFSVF-FPLM 1746
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 353 (129.3 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 100/301 (33%), Positives = 158/301 (52%)
Query: 583 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFER 642
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + +S+ R
Sbjct: 2164 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2222
Query: 643 L-TLLNHS-KH---------LLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
LL S +H L IQYRMHP I LFP+ Y + ++ +
Sbjct: 2223 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTETSRCSSDW 2282
Query: 692 LPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSP 751
P F PY ++ G E S N+ E+ +V++++ KL K +IG+++
Sbjct: 2283 -P---FQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIITH 2337
Query: 752 YTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCN-TGGSIGFISNP 810
Y AQ I+K + E++ K +V +VD FQG ++D +I++ VR N T GSIGF+++
Sbjct: 2338 YKAQKTMIQKDLDKEFDRKGA--AEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 2395
Query: 811 QRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVS 870
QR+NV +TRA++ L+ILG+ RTL+ + W L+ DA+ R K D+N +++
Sbjct: 2396 QRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTC-DKNYRHDAMKIL 2453
Query: 871 K 871
K
Sbjct: 2454 K 2454
Score = 107 (42.7 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 44/139 (31%), Positives = 61/139 (43%)
Query: 251 NEPQVGAV-FACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL------------- 296
NE Q A+ AC + + L GPPGTGK+KT+ +L+ LL
Sbjct: 1925 NEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENS 1984
Query: 297 --RIKC-RTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLK 353
+IK R L C P+N A+ EL + + KE K D +N C GDI L
Sbjct: 1985 NAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCK-DKKNPMGNC--GDINLVRLGPEKS 2041
Query: 354 VNPGFEEIYLDYRVKRLME 372
+N + LD +V M+
Sbjct: 2042 INNEVLKFSLDSQVNHRMK 2060
Score = 45 (20.9 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 34 SLFKDQVEKIPESFQSVKQYFGSFVFPLL 62
SL + ++P FQ YF F FPL+
Sbjct: 1714 SLCQSIERRVPIRFQDCGDYFNVF-FPLM 1741
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 342 (125.4 bits), Expect = 1.0e-29, Sum P(3) = 1.0e-29
Identities = 98/301 (32%), Positives = 157/301 (52%)
Query: 583 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFER 642
P + +++DEA Q E E+ PL + N +L+GD QLP V S + + +S+ R
Sbjct: 2150 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2208
Query: 643 LTLL---NHSKHL--------LDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
L N +++ L IQYRMHP I LFP+ Y + +S +
Sbjct: 2209 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTESIRCSSEW 2268
Query: 692 LPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSP 751
P F PY ++ G E S N+ E+ +V++I+ KL K +IG+++
Sbjct: 2269 -P---FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITH 2323
Query: 752 YTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNT-GGSIGFISNP 810
Y AQ I+K + E++ K +V +VD FQG ++D II++ VR + GSIGF+++
Sbjct: 2324 YKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASL 2381
Query: 811 QRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVS 870
QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R K D N +++
Sbjct: 2382 QRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTS-DPNYRHDAMKIL 2439
Query: 871 K 871
K
Sbjct: 2440 K 2440
Score = 106 (42.4 bits), Expect = 1.0e-29, Sum P(3) = 1.0e-29
Identities = 38/111 (34%), Positives = 51/111 (45%)
Query: 278 GPPGTGKTKTVSMLLFSLL---------------RIKC-RTLACTPTNVAITELASRALR 321
GPPGTGK+KT+ LL+ LL +IK R L C P+N A+ EL + +
Sbjct: 1939 GPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKKIIL 1998
Query: 322 LVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLME 372
KE K D +N C GDI L +N + LD +V M+
Sbjct: 1999 EFKEKCK-DKKNPLGNC--GDINLVRLGPEKSINTEVLKFSLDSQVNHRMK 2046
Score = 54 (24.1 bits), Expect = 5.2e-23, Sum P(4) = 5.2e-23
Identities = 24/68 (35%), Positives = 30/68 (44%)
Query: 444 NCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLLD--SFRSLLFQKNVVSEELEKL 501
N A+ L NC L + I N D V + S S LF+K + SEEL+
Sbjct: 811 NTAISDLENCSGTDGGALKEDSIGHNVPSDPVLDDKHEEQKSQNSSLFKKEIKSEELDN- 869
Query: 502 FSHSVDED 509
S S DED
Sbjct: 870 -SSSDDED 876
Score = 41 (19.5 bits), Expect = 1.0e-29, Sum P(3) = 1.0e-29
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 34 SLFKDQVEKIPESFQSVKQYFGSFVFPLL 62
SL + +P FQ +YF F+ PL+
Sbjct: 1705 SLCQSISRPVPVRFQDCAEYFNVFL-PLI 1732
Score = 40 (19.1 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 214 TQVLGTDSVVEESCELCSLQRKGIWDEKFGPSLSSTLNEPQVG 256
++ L ++S +E ++ S ++ G + PS S++ N P+ G
Sbjct: 692 SEALFSESA-QEQVKI-SAEKSGKESSSYAPSNSTSRNGPEWG 732
Score = 38 (18.4 bits), Expect = 5.2e-23, Sum P(4) = 5.2e-23
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 518 RYLLQLHQRRSECLSVLRNLWNSLDELNLP 547
R +L QR EC+ LR+ ++ ++ P
Sbjct: 1282 RKAFELSQRSLECIVQLRDHGKTVGVVDAP 1311
Score = 38 (18.4 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 391 LEDCVSQYHIYVEKLKEREDCNENQSEEKKC 421
++DC Y YV K + ++E C
Sbjct: 1806 MQDCSHYYCGYVHKFRRTSVMRSGKAECSLC 1836
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 340 (124.7 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 100/303 (33%), Positives = 160/303 (52%)
Query: 583 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFER 642
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + +S+ R
Sbjct: 2151 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 2209
Query: 643 LTLL---NHSKHL--------LDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2210 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNK------NLKTNRLTETI 2263
Query: 692 LPGTE--FGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVV 749
+E F PY ++ G E+ S N+ E+ +V++I+ KL K +IG++
Sbjct: 2264 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2322
Query: 750 SPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNT-GGSIGFIS 808
+ Y AQ I+K + E++ K +V +VD FQG ++D II++ VR + GSIGF++
Sbjct: 2323 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2380
Query: 809 NPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLE 868
+ QR+NV +TRA++ L+ILG+ RTL+ ++ W L+ DA+ R K D N ++
Sbjct: 2381 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTC-DPNYRHDAMK 2438
Query: 869 VSK 871
+ K
Sbjct: 2439 ILK 2441
Score = 106 (42.4 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 38/111 (34%), Positives = 51/111 (45%)
Query: 278 GPPGTGKTKTVSMLLFSLL---------------RIKC-RTLACTPTNVAITELASRALR 321
GPPGTGK+KT+ LL+ LL +IK R L C P+N A+ EL + +
Sbjct: 1940 GPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKKIIL 1999
Query: 322 LVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLME 372
KE K D +N C GDI L +N + LD +V M+
Sbjct: 2000 EFKEKCK-DKKNPLGNC--GDINLVRLGPEKSINTEVLKFSLDSQVSHRMK 2047
Score = 48 (22.0 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 378 SGWR-HCFSSMIDLLED---CVSQYHIYVEKLKEREDCNENQSEEKKCRKETEGSKGECK 433
S W+ H S L ED C++ H+ + C + E+ R + +G K +
Sbjct: 1077 SVWQDHKIDSKSSLQEDQKSCIA--HV-ADSTNNNLGCGADSVSEEVVRNKEKGVKEHAE 1133
Query: 434 PFLEYVRESFNCAV 447
P E F C +
Sbjct: 1134 PHSSVSAEGF-CKI 1146
Score = 45 (20.9 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 22/68 (32%), Positives = 28/68 (41%)
Query: 444 NCAVIPLRNCIFIFCTHLPKTYISENSFQDMVALKSLLD--SFRSLLFQKNVVSEELEKL 501
N A L NC L K I + D V + S S LF+K + SE+L+
Sbjct: 809 NAATSDLENCSGTDRGALKKDTIEHDVSSDSVLNDDHEEQKSKNSSLFKKEIKSEKLDN- 867
Query: 502 FSHSVDED 509
S DED
Sbjct: 868 -SSFDDED 874
Score = 44 (20.5 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 394 CVSQYHIYVEKLKEREDCNE------NQSEEKKCRKETE 426
C + +I K+ DC+E N S EKK KE E
Sbjct: 1014 CGIEGNIEQSKVSRENDCSEQHDLVVNTSVEKKLVKEEE 1052
Score = 43 (20.2 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 516 GKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 550
G R +L QR EC+ LR+ ++ + P T
Sbjct: 1281 GPRKAFELSQRSLECIVQLRDHGKTVGVVEAPKKT 1315
Score = 41 (19.5 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 34 SLFKDQVEKIPESFQSVKQYFGSFVFPLL 62
SL + +P FQ +YF F+ PL+
Sbjct: 1706 SLCQSISRPVPVRFQDCAEYFNVFL-PLI 1733
Score = 38 (18.4 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 394 CVSQYHIYVEKLKEREDCNENQSEEKKC 421
C Q I + + +D +E Q E+K+C
Sbjct: 989 CHEQV-IIISDSDDEDDADE-QDEDKRC 1014
Score = 38 (18.4 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 229 LCSLQRKGIWDEKFGPSLSST---LNEPQVGAVFACLRRLDCDHKSGVELRWGPPG 281
L QRKG DE F + + P AV ++++ + K + + P G
Sbjct: 1958 LTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLG 2013
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 341 (125.1 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 113/356 (31%), Positives = 182/356 (51%)
Query: 519 YLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL-LKDFCFKRASLFFSTASSSYKLH 577
YLLQ Q++ + L ++ N +L+ P T ++ + C RA++ +T SS KL
Sbjct: 1326 YLLQQLQQKEKKLQLISN------QLSPPLTQREEFEISHMCVTRANIICTTLSSCVKLA 1379
Query: 578 SVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGR 637
+ ++ + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK +
Sbjct: 1380 NY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLSN 1437
Query: 638 SLFERL-----TLLNH--SKHLLDIQ-YRMHPSISLFPNLQFYRNQIL-DGANVKSKSYE 688
S+F+R+ T L+ S HL+ + +++ + P + + NQ + + ++
Sbjct: 1438 SMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLINAECTA 1497
Query: 689 KHYLPGTEFGPYTFINI-----IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQM 743
+ P PY IN+ G + S N E V K+L ++ K + SK+
Sbjct: 1498 RFASP---LIPYCVINLKYTCDSNGAQN---KSISNNEEARFVAKLLTEMDKH-MPSKRF 1550
Query: 744 VSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS 803
S G++SPY Q A+ + I S + ++VD +QG E+D+IIIS R T G
Sbjct: 1551 -SYGLISPYQNQCYALSQVIPSH------MNITPQTVDSYQGLEKDVIIISNAR--TRGC 1601
Query: 804 IGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADED 859
GF++N QR+NVALTR R CL I GN L S E +W L+ DA+ R+ +F D D
Sbjct: 1602 -GFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDRD 1655
Score = 79 (32.9 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL------RIKCRTL 303
LNE Q V +R+ D + + L GPPGTGK++ +S L L + + L
Sbjct: 1172 LNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKIL 1231
Query: 304 ACTPTNVAITEL 315
C +N A+ +
Sbjct: 1232 ICAHSNTAVDHI 1243
Score = 45 (20.9 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 37 KDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLE 74
+D + IP F S K Y FV PL+ +++L S +E
Sbjct: 993 QDVLMPIPPEFDSFKNYREIFV-PLM---KLELLSTIE 1026
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 344 (126.2 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 120/421 (28%), Positives = 202/421 (47%)
Query: 475 VALKSLLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKR-YLLQLHQRRSECLSV 533
VA+ +L SL F+K V + K+ + + L +LH E L+
Sbjct: 620 VAVDRVLLGLLSLGFEKFVRVGSVRKIAKPILPYSLHAGSENENEQLKELHGLMKEDLTP 679
Query: 534 LRNLW--NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDE 591
L ++ S+++ L T+K LLK R A ++ +K P+ +V+DE
Sbjct: 680 LERVYVRKSIEQHKLG--TNKTLLKQV---RVVGVTCAACPFPCMNDLKF-PV--VVLDE 731
Query: 592 AAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDGASFGRSLFERLTLLNHSK 650
+Q+ E S +P+ +L+GD QL P + S + ++LF+RL L+ H
Sbjct: 732 CSQITEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLEQTLFDRLCLMGHKP 791
Query: 651 HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGRE 710
LL QYR HP+IS N FY ++DG + + +LP F NI G +
Sbjct: 792 VLLRTQYRCHPAISDISNDLFYEGNLVDGISETERGPLLEWLP-----TLCFYNIKGPEQ 846
Query: 711 EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGS-EYEN 769
+S N+ E + +K++Q L + + IGV++ Y +Q+ + + + +++N
Sbjct: 847 IERDNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSAVDFDN 903
Query: 770 KDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGN 829
D V+V +VD FQG E++III+S VR +GFI + +R+NVALTR R L I+GN
Sbjct: 904 PDIKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHLLIVGN 960
Query: 830 ERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLE-VSKESVEIDAESLTSRSQRG 888
L + +WG ++ + R+ + + + +L + KE E AE +S++
Sbjct: 961 LACLRKNR-LWGRVIQHCEGRR---DGLQHASQCEPQLNHLLKEYFEKRAEEKQKKSEKD 1016
Query: 889 K 889
K
Sbjct: 1017 K 1017
Score = 61 (26.5 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 23 FSWSLENIFNQSLFKDQVEKIPE----SFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 78
F W LE + L Q E +P +S+ Y S PL EE ++ +R G + R+
Sbjct: 306 FKW-LEEVTPGYL--TQEESLPSIVLSDIKSIGLYLRSQNIPLFEECQLLVRKGFDFQRK 362
Query: 79 APYAEVIAFEELKP 92
Y ++ F + P
Sbjct: 363 Q-YGKLKKFNAVNP 375
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 297 (109.6 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 91/295 (30%), Positives = 154/295 (52%)
Query: 552 KQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINH 611
+QL K A + +T + + + + ++IDE AQ E I L L G +
Sbjct: 332 QQLAVSDVIKNADVILTTLTGALT-RKLDNRTFDLVIIDEGAQALEVACWIAL-LKG-SR 388
Query: 612 AVLIGDECQLPAMVESKISDGASFGRSLFERLTLL--NHSKHLLDIQYRMHPSISLFPNL 669
+L GD QLP ++S ++ GR+LFERL L + K +L +QYRMH I + +
Sbjct: 389 CILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSK 448
Query: 670 QFYRNQILDGANVKSKS-YEKHYLPGTEFGPYTFINI-IGG----REEFIYHSCRNMVEV 723
+ Y N+I ++V S ++ + + T + + G ++ S N E
Sbjct: 449 ELYDNKITAHSSVASHMLFDLENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEA 508
Query: 724 SVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGF 783
V + ++L ++ V Q IG+++PY AQV+ +R G E + KD +++ +VDGF
Sbjct: 509 EVAMAHAKRLMESGV---QPSDIGIITPYAAQVMLLRILRGKEEKLKD---MEISTVDGF 562
Query: 784 QGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSES 838
QG E++ IIIS VR N+ +GF+ + +R+NVA+TR+R I+ + T +SS++
Sbjct: 563 QGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCCIVCDTET-VSSDA 616
Score = 95 (38.5 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 231 SLQRKGIWDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSM 290
S+ +K + + F P + L++ Q A+ L D V L GPPGTGKT TV
Sbjct: 174 SVSKKDV--KSFTP-FNKNLDQSQKDAITKALSSKD------VFLLHGPPGTGKTTTVVE 224
Query: 291 LLFSLLRIKCRTLACTPTNVAITELASR 318
++ ++ + LAC +N+A+ + R
Sbjct: 225 IVLQEVKRGSKILACAASNIAVDNIVER 252
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 344 (126.2 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 92/307 (29%), Positives = 162/307 (52%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDGASFGRSLFERLTL 645
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + G ++LF+RL L
Sbjct: 623 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCL 682
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINI 705
+ H L QYR HP IS N FY +++G + + +S +LP F N+
Sbjct: 683 MGHKPIQLRTQYRCHPVISAIANDLFYEGNLVNGISERERSPVLEWLP-----TLCFYNV 737
Query: 706 IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGS 765
G + +S N+ E + +K+++ L + + IGV++ Y +Q+ I + +
Sbjct: 738 TGTEQVERENSFVNVAEAAFTLKLIRSLIASGLEGSM---IGVITLYKSQMYKICSLLSA 794
Query: 766 -EYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCL 824
+ ++ D V+V +VD FQG E++III+S VR +GFI + +R+NVALTR R L
Sbjct: 795 VDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 851
Query: 825 WILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLE-VSKESVEIDAESLTS 883
I+G+ L ++ +WG ++ K R+ + + + +L+ + KE +E AE
Sbjct: 852 LIIGSLSCLRKNQ-LWGRVIQHCKGRE---DGLQHASQCEPQLDRLLKEYLEKQAEEKQK 907
Query: 884 RSQRGKL 890
++++ KL
Sbjct: 908 KTEKEKL 914
Score = 52 (23.4 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 23 FSWSLENIFNQSLFKD--QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 78
F W LE++ + L ++ Q I +S+ Y S + EE ++ LR G + ++
Sbjct: 202 FKW-LEDVTPEQLSQNESQPNMIFNDIKSIGSYLRSQKIAVYEECQLLLRKGFDFQKK 258
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 209 (78.6 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 63/203 (31%), Positives = 106/203 (52%)
Query: 562 RASLFFST--ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 619
++ + F+T A+ +L +K P+ +++DEA Q E+ + +PL L GI + V +GDE
Sbjct: 792 QSQIIFTTNIAAGGRELKVIKECPV--VIMDEATQSSEASTLVPLSLPGIRNFVFVGDEK 849
Query: 620 QLPAMVESKISDGASFGRSLFERLTLLNHSKH--LLDIQYRMHPSISLFPNLQFYRNQIL 677
QL S S+ SLFER+ K+ +LD QYRMHP IS FP + Y ++
Sbjct: 850 QL-----SSFSNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELK 904
Query: 678 DGANVKSKSYE--KH--YLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKL 733
DG + K++ +H + + GP + + + + + + N E ++KI+Q L
Sbjct: 905 DGVTDEQKAWPGVQHPLFFYQCDLGPESRVR--STQRDIVGFTYENKHECVEIVKIIQIL 962
Query: 734 YKAWVGSK-QMVSIGVVSPYTAQ 755
+ K + IGV++PY+AQ
Sbjct: 963 M---LDKKVPLEEIGVITPYSAQ 982
Score = 159 (61.0 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 777 VKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISS 836
V +VD FQG E+ II S VR NT IGF+ + +R+NVALTRA+H L ++GN+ L
Sbjct: 1038 VATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKG 1097
Query: 837 ESIWGTLVCDAKARQCFF 854
+ +W + + ++ F
Sbjct: 1098 DPLWKDYITYLEEQEVIF 1115
Score = 84 (34.6 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 21/83 (25%), Positives = 43/83 (51%)
Query: 271 SGVELRWGPPGTGKTKTVSMLLFSLL-RIKCRTLACTP-TNVAITELASRAL------RL 322
+ + + GPPGTGKT T+ ++ ++ R + C +N+AI +A + + ++
Sbjct: 663 NSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKI 722
Query: 323 VKESYKRDSRNNTPFCPLGDILL 345
++ K+ + + PLG+I L
Sbjct: 723 LRILSKKKEQQYSDDHPLGEICL 745
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 679 GANVKSKSYEKHYLP 693
G K++S +KH LP
Sbjct: 304 GGKGKNESVDKHQLP 318
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 338 (124.0 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 86/269 (31%), Positives = 145/269 (53%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGA---SFGRSLFERL 643
+V+DE +Q+ E S +P+ +L+GD QLP ++ SD A ++LF+RL
Sbjct: 628 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQG--SDAAHENGLEQTLFDRL 685
Query: 644 TLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFI 703
L+ H LL QYR HP+IS N FY+ +++G +S +LP F
Sbjct: 686 CLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFY 740
Query: 704 NIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKI 763
N+ G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 741 NVKGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLL 797
Query: 764 GS-EYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARH 822
+ ++ + D TV+V +VD FQG E++III+S VR +GFI + +R+NVALTR +
Sbjct: 798 SAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKR 854
Query: 823 CLWILGNERTLISSESIWGTLVCDAKARQ 851
L I+GN L ++ +WG ++ + R+
Sbjct: 855 HLLIVGNLACLRKNQ-LWGRVIQHCEGRE 882
Score = 54 (24.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 48 QSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAEVIAFEELKP 92
+S+ Y S PL EE ++ +R G + R+ Y ++ F + P
Sbjct: 233 KSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQ-YGKLKKFTTVNP 276
Score = 42 (19.8 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 1 MMEGKGCSS-STKKAVGFTGHTVFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVF 59
++ G C + S K +G + S + I + L + Q+ IP FQS Y +F
Sbjct: 66 VLGGSTCYNYSVKDLQEISGSELCFPSGQKIKSAYLPQRQIH-IPAVFQSPAHYKQTFTS 124
Query: 60 PLLEETRMQLRSGLEAMRRA 79
L+E + L + +++A
Sbjct: 125 CLIEHLNILLFGLAQNLQKA 144
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 288 (106.4 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 108/353 (30%), Positives = 166/353 (47%)
Query: 506 VDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQ--LLKDFCFKRA 563
+ +D AFV R Q RR + ++WN + L ++ +L+
Sbjct: 295 IRKDIDQAFVNNR---QTQDRREKS-----SVWNEVKLLRKELKEREEAAMLESLTSAAV 346
Query: 564 SLFFST-ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 622
L +T ASS L + + +VIDE AQ E+ IPL A +L GD QLP
Sbjct: 347 VLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKA--RKCILAGDHKQLP 404
Query: 623 AMVESKISDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
S + A SL ERL + ++ L +QYRMH +I + + Y Q+
Sbjct: 405 PTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHP 464
Query: 681 NVKSKSYEKHYLPGT----EFG-PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIKILQ 731
+V LPG E G P ++ G G E+ S N EV +V +Q
Sbjct: 465 SVAGHLLRD--LPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQ 522
Query: 732 KLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDII 791
L A V Q I V++PY QV +R+ + + +++KSVDGFQG E++ +
Sbjct: 523 ALVDAGV---QASDIAVITPYNLQVDLLRQSLAHRHPE-----LEIKSVDGFQGREKEAV 574
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
++S VR N G +GF++ +R+NVA+TRAR + ++ + RT +S+ + TLV
Sbjct: 575 VLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTLV 626
Score = 104 (41.7 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALR 321
GPPGTGKT TV ++ +R + L C P+N+A+ L R R
Sbjct: 213 GPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDNLVERLAR 256
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 288 (106.4 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 108/353 (30%), Positives = 166/353 (47%)
Query: 506 VDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQ--LLKDFCFKRA 563
+ +D AFV R Q RR + ++WN + L ++ +L+
Sbjct: 295 IRKDIDQAFVNNR---QTQDRREKS-----SVWNEVKLLRKELKEREEAAMLESLTSAAV 346
Query: 564 SLFFST-ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 622
L +T ASS L + + +VIDE AQ E+ IPL A +L GD QLP
Sbjct: 347 VLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKA--RKCILAGDHKQLP 404
Query: 623 AMVESKISDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
S + A SL ERL + ++ L +QYRMH +I + + Y Q+
Sbjct: 405 PTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHP 464
Query: 681 NVKSKSYEKHYLPGT----EFG-PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIKILQ 731
+V LPG E G P ++ G G E+ S N EV +V +Q
Sbjct: 465 SVAGHLLRD--LPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQ 522
Query: 732 KLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDII 791
L A V Q I V++PY QV +R+ + + +++KSVDGFQG E++ +
Sbjct: 523 ALVDAGV---QASDIAVITPYNLQVDLLRQSLAHRHPE-----LEIKSVDGFQGREKEAV 574
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
++S VR N G +GF++ +R+NVA+TRAR + ++ + RT +S+ + TLV
Sbjct: 575 VLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTLV 626
Score = 104 (41.7 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALR 321
GPPGTGKT TV ++ +R + L C P+N+A+ L R R
Sbjct: 213 GPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDNLVERLAR 256
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 285 (105.4 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 96/320 (30%), Positives = 160/320 (50%)
Query: 535 RNLWNSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQ 594
R + +S+ EL + ++ L +++ ST + + I+ +++VIDE AQ
Sbjct: 369 RVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGASDSSLKGIDNFDWVVIDECAQ 428
Query: 595 LKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRS--LFERLTLL--NHSK 650
E+ IP+Q N +L GD QLP + S + A G S LFER+ +
Sbjct: 429 ALEASCWIPIQKG--NKLLLAGDHQQLPPTIHSM--EAAKMGLSITLFERIIKQYGDQVS 484
Query: 651 HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG-----TEFGPYTFINI 705
LL++QYRM+ I + +++FY ++++ +V + P T P I+
Sbjct: 485 RLLNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDT 544
Query: 706 IG-GREEFIY---HSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRK 761
G EE S N EV VV + ++KL + V IGV++PY QV ++
Sbjct: 545 SGCDMEESQDDEGESKFNNGEVIVVKRHIEKLIECGVKPND---IGVITPYNGQVKLLKS 601
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGG--SIGFISNPQRVNVALTR 819
+ +Y + +++ +VDGFQG E+D+IIIS VR NT +GF++ +R NVA+TR
Sbjct: 602 YLSKKYSS-----MEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTEDRRTNVAITR 656
Query: 820 ARHCLWILGNERTLISSESI 839
AR + ++ + T+ S E +
Sbjct: 657 ARKHVVVVCDTDTISSHEPL 676
Score = 103 (41.3 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 240 EKFGPSL-SSTLNEPQVGAVFACLRRLD--CDHKSGVELRWGPPGTGKTKTVSMLLFSLL 296
EKF L + LN+ Q A+ L D C H GPPGTGKT TV + L+
Sbjct: 224 EKFEQQLINKGLNQSQKEAILFSLSSNDVACIH--------GPPGTGKTTTVVEFIVQLI 275
Query: 297 RIKCRTLACTPTNVAITELASRALRLVKES 326
+ + LAC P+N+++ + + L S
Sbjct: 276 KSGKKVLACGPSNLSVDNMLEKLLEYSNSS 305
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 341 (125.1 bits), Expect = 8.8e-26, Sum P(3) = 8.8e-26
Identities = 122/436 (27%), Positives = 215/436 (49%)
Query: 475 VALKSLLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKR----YLLQLHQRRSEC 530
VA+ +L SL F+K V + K+ + +SL + G L +LH E
Sbjct: 522 VAVDRVLLGLLSLGFEKFVRVGSVRKIAKPVLP--YSL-YAGSENENEQLKELHALMKED 578
Query: 531 LSVLRNLW--NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLV 588
L+ + ++ S+++ L T+K LLK R A ++ +K P+ +V
Sbjct: 579 LTPVERVYVRKSIEQHKLG--TNKTLLKQV---RVVGVTCAACPFPCMNDLKF-PV--VV 630
Query: 589 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGA---SFGRSLFERLTL 645
+DE +Q+ E S +P+ +L+GD QLP ++ SD A ++LF+RL L
Sbjct: 631 LDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQG--SDAAHENGLEQTLFDRLCL 688
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINI 705
+ H LL QYR HP+IS N FY +++G + +S +LP F N+
Sbjct: 689 MGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP-----TLCFYNV 743
Query: 706 IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGS 765
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + + +
Sbjct: 744 KGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 800
Query: 766 -EYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCL 824
++++ + V+V +VD FQG E++III+S VR +GFI + +R+NVALTR R L
Sbjct: 801 MDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 857
Query: 825 WILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLE-VSKESVEIDAESLTS 883
I+GN L + +WG ++ + R+ + + + +L+ + K+ +E AE
Sbjct: 858 LIVGNLACLRKNR-LWGRVIQHCEGREGGL---QHASQYEPQLDHLLKDYLEKQAEEKQK 913
Query: 884 R-SQRGKLCYKPKYEK 898
+ +++ KL K Y +
Sbjct: 914 KKAEKDKLTDKKSYSQ 929
Score = 51 (23.0 bits), Expect = 8.8e-26, Sum P(3) = 8.8e-26
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 48 QSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAEVIAFEELKP 92
+S+ Y S PL EE ++ +R G + R+ Y ++ F + P
Sbjct: 234 KSIGFYLRSQKIPLYEECQLFVRKGFDFQRKR-YGKLKKFTTVDP 277
Score = 40 (19.1 bits), Expect = 8.8e-26, Sum P(3) = 8.8e-26
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 436 LEYVRESFNCAVIPLRNCIFIFC--THLPKTYISENSFQDMVALKSLLDSFRSLLFQKNV 493
L+ +R+ FN A +PL + T +++ F A ++ F L + +
Sbjct: 368 LKNIRDCFNPATLPLTQYLLTMSSSTTTSNKRVNKRKFIPP-AFSNINTKFELLSIEATL 426
Query: 494 -VSEELEKLFSHSVDEDFSLAFV 515
++ EL ++ H +++D + A +
Sbjct: 427 KLASELIQV--HKLNKDQAAALI 447
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 338 (124.0 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 86/269 (31%), Positives = 145/269 (53%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGA---SFGRSLFERL 643
+V+DE +Q+ E S +P+ +L+GD QLP ++ SD A ++LF+RL
Sbjct: 1806 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQG--SDAAHENGLEQTLFDRL 1863
Query: 644 TLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFI 703
L+ H LL QYR HP+IS N FY+ +++G +S +LP F
Sbjct: 1864 CLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFY 1918
Query: 704 NIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKI 763
N+ G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1919 NVKGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLL 1975
Query: 764 GS-EYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARH 822
+ ++ + D TV+V +VD FQG E++III+S VR +GFI + +R+NVALTR +
Sbjct: 1976 SAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKR 2032
Query: 823 CLWILGNERTLISSESIWGTLVCDAKARQ 851
L I+GN L ++ +WG ++ + R+
Sbjct: 2033 HLLIVGNLACLRKNQ-LWGRVIQHCEGRE 2060
Score = 54 (24.1 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 48 QSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAEVIAFEELKP 92
+S+ Y S PL EE ++ +R G + R+ Y ++ F + P
Sbjct: 1411 KSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQ-YGKLKKFTTVNP 1454
Score = 42 (19.8 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 1 MMEGKGCSS-STKKAVGFTGHTVFSWSLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVF 59
++ G C + S K +G + S + I + L + Q+ IP FQS Y +F
Sbjct: 1244 VLGGSTCYNYSVKDLQEISGSELCFPSGQKIKSAYLPQRQIH-IPAVFQSPAHYKQTFTS 1302
Query: 60 PLLEETRMQLRSGLEAMRRA 79
L+E + L + +++A
Sbjct: 1303 CLIEHLNILLFGLAQNLQKA 1322
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 325 (119.5 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 90/278 (32%), Positives = 146/278 (52%)
Query: 581 IEPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKIS-DGASFGR 637
++ L F +V+DE +Q+ E S +P+ VL+GD QLP ++ S +
Sbjct: 616 LDTLKFPVVVLDECSQMTEPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQ 675
Query: 638 SLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEF 697
+LF+RL L+ H LL QYR HP+IS N FY ++DG + K +S +LP F
Sbjct: 676 TLFDRLCLMGHKTILLRTQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLDWLPTLCF 735
Query: 698 GPYTFINIIGGREEFIY-HSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
Y+ + G E+ +S NM EV +K +Q L + + ++GV++ Y +Q+
Sbjct: 736 --YS----VNGLEQIERDNSFYNMAEVHFTVKFIQALIASGIDGS---AVGVITFYKSQM 786
Query: 757 VAIRKKIGSEYENKDGFTVK---VKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRV 813
++ + S + + F VK V +VD FQG E++I+++S VR GF + +R+
Sbjct: 787 YKLQNLLRSIHS--EAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTR---QTGFTDSEKRM 841
Query: 814 NVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQ 851
NVALTRA+ L I+GN L S ++ ++ K R+
Sbjct: 842 NVALTRAKRHLLIVGNLACL-SKNRLYERVINHCKGRE 878
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 278 (102.9 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 93/286 (32%), Positives = 146/286 (51%)
Query: 570 ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 629
AS+ L + + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASTDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHKQLPPTTVSHK 411
Query: 630 SDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 687
+ A RSL ERL + + +L +QYRMH +I+ + + Y Q+ +V
Sbjct: 412 AALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLL 471
Query: 688 EKHYLPG---TEFG--PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
+ LPG TE P I+ G G EE S N EV +V +Q L A V
Sbjct: 472 KD--LPGVADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV 529
Query: 739 GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRC 798
Q I V++PY QV +R+ + +++ +++KSVDGFQG E++ +I++ VR
Sbjct: 530 ---QAGDIAVIAPYNLQVDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRS 581
Query: 799 NTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
N G +GF++ +R+NVA+TRAR + ++ + T +++ + TLV
Sbjct: 582 NRKGEVGFLAEDRRINVAVTRARRHVAVICDSHT-VNNHAFLKTLV 626
Score = 103 (41.3 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKR 329
GPPGTGKT TV ++ ++ + L C P+N+A+ L R L L K+ R
Sbjct: 213 GPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVER-LALCKKQILR 263
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 278 (102.9 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 93/286 (32%), Positives = 146/286 (51%)
Query: 570 ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 629
AS+ L + + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASTDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHKQLPPTTVSHK 411
Query: 630 SDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 687
+ A RSL ERL + + +L +QYRMH +I+ + + Y Q+ +V
Sbjct: 412 AALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLL 471
Query: 688 EKHYLPG---TEFG--PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
+ LPG TE P I+ G G EE S N EV +V +Q L A V
Sbjct: 472 KD--LPGVADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV 529
Query: 739 GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRC 798
Q I V++PY QV +R+ + +++ +++KSVDGFQG E++ +I++ VR
Sbjct: 530 ---QAGDIAVIAPYNLQVDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVILTFVRS 581
Query: 799 NTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
N G +GF++ +R+NVA+TRAR + ++ + T +++ + TLV
Sbjct: 582 NRKGEVGFLAEDRRINVAVTRARRHVAVICDSHT-VNNHAFLKTLV 626
Score = 103 (41.3 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKR 329
GPPGTGKT TV ++ ++ + L C P+N+A+ L R L L K+ R
Sbjct: 213 GPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVER-LALCKKQILR 263
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 253 (94.1 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 77/241 (31%), Positives = 124/241 (51%)
Query: 657 YRMHPSISLFPNLQFYRNQILDGAN-VKSKSY-EKHYLPGTEFGPYTFINIIGGRE-EFI 713
YR HP+I PN FY N++ AN ++ +++ + +LP F P F ++G E E
Sbjct: 748 YRSHPAILKIPNELFYENELQVFANQMEREAFCQWEHLPRKGF-PVVFHGVMGKDEREAN 806
Query: 714 YHSCRNMVEVSVVIKILQKLYKAWVGSKQMVS-----IGVVSPYTAQVVAIRKKIGSEYE 768
S N+ E+ V++ L L + G K + IG+++PY QV IRK + + E
Sbjct: 807 SPSFFNVTEIEVIVNYLNNLMQTQ-GKKGLPKLGPNDIGIIAPYRKQVEKIRKALNTVGE 865
Query: 769 NKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGG-------SIGFISNPQRVNVALTRAR 821
K +KV SV+ FQG E +II+STVR + +IGF+SN +R NVA+TRA+
Sbjct: 866 LKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEKRFNVAMTRAK 925
Query: 822 HCLWILGNERTLISSESIWGTLV--CDAKARQCFF-----KADEDRNLAKARLEVSKESV 874
L ++GN ++S + W + C+ + F + +ED A L++S +
Sbjct: 926 GLLIVVGNP-VILSKDPTWQKFIQYCEQEQGYTGFDYKDAEGEEDVVSRLASLKISSDDT 984
Query: 875 E 875
+
Sbjct: 985 D 985
Score = 95 (38.5 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 52/167 (31%), Positives = 72/167 (43%)
Query: 538 WNSL-DELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHS--VKIEPLNFLVIDEAAQ 594
WN D LP SK+ L + S+ T ++ +L S V + + IDEA Q
Sbjct: 616 WNEAQDSFLLP---SKETLIGY-----SIIVVTLVTAGRLVSGGVAMGHFTHIFIDEAGQ 667
Query: 595 LKESESTIPLQLAGI-----NHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLN-- 647
E E I + AG+ VL GD QL ++ S ++ G+SL ERL N
Sbjct: 668 AVEPECIIGI--AGLLDPLKGQLVLAGDPQQLGPVLRSPLAQLHGLGQSLLERLMKRNAL 725
Query: 648 -------HSKH------LLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
+SK+ L YR HP+I PN FY N++ AN
Sbjct: 726 YQKSQDDNSKYDSRFVTKLLRNYRSHPAILKIPNELFYENELQVFAN 772
Score = 83 (34.3 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 275 LRWGPPGTGKTKTVSMLLFSLLRIKCRT--LACTPTNVAITELASRAL 320
L +GPPGTGKT TV + + + K ++ LAC P+N A L R L
Sbjct: 538 LIFGPPGTGKTVTVVEAIKQVDKSKAQSHILACAPSNSACDLLCERLL 585
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 278 (102.9 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 93/286 (32%), Positives = 144/286 (50%)
Query: 570 ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 629
ASS L + + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHRQLPPTTVSHR 411
Query: 630 SDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 687
+ A RSL ERL + + +L +QYRMH +I + + Y Q +V
Sbjct: 412 AALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLL 471
Query: 688 EKHYLPG---TEFG--PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
+ LPG TE P I+ G G EE S N EV +V +Q L A V
Sbjct: 472 KD--LPGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV 529
Query: 739 GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRC 798
Q I V++PY QV +R+ + +++ +++KSVDGFQG E++ ++++ VR
Sbjct: 530 ---QAGDIAVIAPYNLQVDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVLLTFVRS 581
Query: 799 NTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
N G +GF++ +R+NVA+TRAR + ++ + T +++ + TLV
Sbjct: 582 NRKGEVGFLAEDRRINVAVTRARRHVAVICDSHT-VNNHAFLETLV 626
Score = 102 (41.0 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKR 329
GPPGTGKT TV ++ ++ + L C P+N+A+ L R L L K+ R
Sbjct: 213 GPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVER-LALCKKRILR 263
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 281 (104.0 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 109/353 (30%), Positives = 166/353 (47%)
Query: 506 VDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQLLKDFCFKRASL 565
V +D AF K Q R LS ++ L L E T+ AS+
Sbjct: 292 VRKDIDQAFA-KSKKAQDKGERGHFLSEIKALRKELKEREETAMTA-------ALTHASV 343
Query: 566 FFSTASSSYKLHSVKIEPLNF---LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 622
+T + + +K+ P N+ +VIDE AQ E+ IPL A +L GD QLP
Sbjct: 344 VLATNTGASSDGPLKLLPENYFDLVVIDECAQALEASCWIPLLKAP--KCILAGDHKQLP 401
Query: 623 AMVESKISDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
+ S + SL ER+ K +L +QYRMH +I + + + Y ++
Sbjct: 402 PTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQYRMHEAIMQWASSEMYGGRLTAHP 461
Query: 681 NVKSKSYEKHYLPG---TEFG--PYTFINIIG-GREEFIYH---SCRNMVEVSVVIKILQ 731
+V + LPG TE P I+ G G E S N EV +V +Q
Sbjct: 462 SVAQHLLKD--LPGVTCTEETTIPLLLIDTAGCGLLELEVEDEQSKGNPGEVQLVGLHIQ 519
Query: 732 KLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDII 791
L A V ++ + VV+PY QV +R+ + Y +++KSVDGFQG E++ +
Sbjct: 520 ALVDAGVKARD---VAVVAPYNLQVDMLREHLCHRYPE-----LEIKSVDGFQGREKEAV 571
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
I+S VR N G +GF++ +R+NVA+TRAR + I+ + RT + S++ G L+
Sbjct: 572 ILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIICDSRT-VGSQAFLGRLL 623
Score = 98 (39.6 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASR 318
GPPGTGKT TV ++ ++ + L C P+NVA+ L R
Sbjct: 210 GPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNVAVDNLVER 250
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 276 (102.2 bits), Expect = 7.9e-25, Sum P(2) = 7.9e-25
Identities = 93/286 (32%), Positives = 143/286 (50%)
Query: 570 ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 629
ASS L + + +VIDE AQ E+ +PL A +L GD QLP + S
Sbjct: 352 ASSDGPLKLLPDGHFDVVVIDECAQALEASCWVPLLKA--RKCILAGDHKQLPPTIISHK 409
Query: 630 SDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 687
+ A SL ERL + +L +QYRMH +I+ + + Y ++ A+V
Sbjct: 410 AALAGLALSLMERLVEERGAGVLRMLTVQYRMHQAIAQWASEALYHGRLTAHASVAGHLL 469
Query: 688 EKHYLPGT----EFG-PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
LPG E G P ++ G G EE S N EV +V +Q L A V
Sbjct: 470 RD--LPGVAATEETGIPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVRLHVQALVDAGV 527
Query: 739 GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRC 798
+ + V++PY QV +R+ + + +++KSVDGFQG E++ +I+S VR
Sbjct: 528 PAGD---VAVITPYNLQVDLLRQSLAQRHPE-----LEIKSVDGFQGREKEAVILSFVRS 579
Query: 799 NTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
N G +GF++ +R+NVA+TRAR + ++ + RT +S+ + TLV
Sbjct: 580 NRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTLV 624
Score = 102 (41.0 bits), Expect = 7.9e-25, Sum P(2) = 7.9e-25
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALR 321
GPPGTGKT TV ++ ++ + L C P+NVA+ L R R
Sbjct: 211 GPPGTGKTTTVVEIILQAVKQGSKVLCCAPSNVAVDNLVERLAR 254
Score = 37 (18.1 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 309 NVAITELASRALRLVK 324
NV++ EL SR + L+K
Sbjct: 34 NVSLKELQSRGVCLLK 49
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 287 (106.1 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 102/327 (31%), Positives = 158/327 (48%)
Query: 530 CLSVLRNLWNSLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSY----KLHS-----VK 580
CLS + N + + ++L KD+ A + S+S LH +K
Sbjct: 321 CLSKITKTKNGRERREI-YKNIRELRKDYRKYEAKTVANIVSASKVVFCTLHGAGSRQLK 379
Query: 581 IEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLF 640
+ + ++IDEA+Q E + IPL G+N +L GD QL V+SK + S+F
Sbjct: 380 GQRFDAVIIDEASQALEPQCWIPL--LGMNKVILAGDHMQLSPNVQSK----RPY-ISMF 432
Query: 641 ERLTLLNHS--KHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY-EKHYLPGTEF 697
ERL K L+IQYRMH IS FP+ FY ++++ VK + + + TE
Sbjct: 433 ERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETEL 492
Query: 698 --GPYTFINIIGGREE---------FIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSI 746
P F + +G +E F S N E +V + L +A + +K I
Sbjct: 493 TDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKD---I 549
Query: 747 GVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGF 806
VV+PY AQV IR+ + + G V++ SVD QG E++ II S VR N +GF
Sbjct: 550 AVVTPYNAQVALIRQLL-----KEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDVREVGF 604
Query: 807 ISNPQRVNVALTRARHCLWILGNERTL 833
++ +R+NVA+TR + L ++G+ T+
Sbjct: 605 LAEKRRLNVAITRPKRHLCVIGDSNTV 631
Score = 83 (34.3 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 231 SLQRKGIWDEKFGPSLSSTLNEPQVGAV-FA-CLRRLDCDHKSGVELRWGPPGTGKTKTV 288
S+ +K I D K+ + LN Q AV F+ ++ L H GPPGTGKT T+
Sbjct: 194 SIDQKLIGDIKY---FNKELNASQKKAVKFSIAVKELSLIH--------GPPGTGKTHTL 242
Query: 289 SMLLFSLLRIKCRTLACTPTNVAITELASR 318
++ L+ R L C +N+A+ + R
Sbjct: 243 VEIIQQLVLRNKRILVCGASNLAVDNIVDR 272
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 277 (102.6 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 96/296 (32%), Positives = 148/296 (50%)
Query: 563 ASLFFSTASSSYKLHSVKIEP---LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 619
AS+ +T + + +K+ P + +VIDE AQ E+ IPL A +L GD
Sbjct: 342 ASVVLATNTGASADGPLKLLPDSHFDMVVIDECAQALEASCWIPLLKA--RKCILAGDHK 399
Query: 620 QLPAMVESKISDGASFGRSLFERLTLLNHSKHL--LDIQYRMHPSISLFPNLQFYRNQIL 677
QLP + S + A SL ERL + + L L +QYRMH +I+ + + Y Q+
Sbjct: 400 QLPPTIVSHKAALAGLSLSLMERLAERHGAGALRMLTVQYRMHQAIARWASEALYHGQLT 459
Query: 678 DGANVKSKSYEKHYLPGT----EFG-PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIK 728
+V LPG E G P ++ G G EE S N EV +V
Sbjct: 460 AHPSVAGHLLRD--LPGVAATEETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGL 517
Query: 729 ILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEE 788
+Q L A V + I V++PY QV +R+ + ++++SVDGFQG E+
Sbjct: 518 HVQALVDAGV---RAADIAVITPYNLQVDLLRQSLAHRLPE-----LEIRSVDGFQGREK 569
Query: 789 DIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
+ +I+S VR N G +GF++ +R+NVA+TRAR + ++ + RT +S+ + TLV
Sbjct: 570 EAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTLV 624
Score = 99 (39.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASR 318
GPPGTGKT TV ++ ++ + L C P+NVA+ L R
Sbjct: 211 GPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVDNLVER 251
Score = 37 (18.1 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 309 NVAITELASRALRLVK 324
NV++ EL SR + L+K
Sbjct: 34 NVSLKELQSRGVCLLK 49
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 273 (101.2 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 96/296 (32%), Positives = 149/296 (50%)
Query: 563 ASLFFSTASSSYKLHSVKIEPLNF---LVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 619
A++ +T + + +K+ P ++ +VIDE AQ E+ IPL A +L GD
Sbjct: 345 ANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKA--RKCILAGDHK 402
Query: 620 QLPAMVESKISDGASFGRSLFERLTLLNHSK--HLLDIQYRMHPSISLFPNLQFYRNQIL 677
QLP S + A SL ERL ++ L +QYRMH +I + + Y Q+
Sbjct: 403 QLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLT 462
Query: 678 DGANVKSKSYEKHYLPGT----EFG-PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIK 728
++V LPG E G P ++ G G EE S N EV +V
Sbjct: 463 AHSSVARHLLRD--LPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSL 520
Query: 729 ILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEE 788
+Q L A V ++ I VVSPY QV +R+ + + +++KSVDGFQG E+
Sbjct: 521 HIQALVDAGVPARD---IAVVSPYNLQVDLLRQSLVHRHPE-----LEIKSVDGFQGREK 572
Query: 789 DIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
+ +I+S VR N G +GF++ +R+NVA+TRAR + ++ + RT +++ + TLV
Sbjct: 573 EAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRT-VNNHAFLKTLV 627
Score = 103 (41.3 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKR 329
GPPGTGKT TV ++ ++ + L C P+N+A+ L R L L K+ R
Sbjct: 214 GPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVER-LALCKQRILR 264
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 278 (102.9 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 94/287 (32%), Positives = 146/287 (50%)
Query: 570 ASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 629
ASS L + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASSDGPLKLLPENHFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHRQLPPTTISHK 411
Query: 630 SDGASFGRSLFERLTLLNHSK---HLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 686
+ A RSL ERL + H +L +QYRMH +I+ + + Y Q+ +V
Sbjct: 412 AALAGLSRSLMERL-VEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHL 470
Query: 687 YEKHYLPG---TEFG--PYTFINIIG-GR---EEFIYHSCRNMVEVSVVIKILQKLYKAW 737
+ LPG TE P I+ G G +E S N EV +V +Q L A
Sbjct: 471 LKD--LPGVADTEETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAG 528
Query: 738 VGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVR 797
V + I V++PY QV +R+ + +++ +++KSVDGFQG E++ +I++ VR
Sbjct: 529 VHAGD---IAVIAPYNLQVDLLRQSLSNKHPE-----LEIKSVDGFQGREKEAVILTFVR 580
Query: 798 CNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
N G +GF++ +R+NVA+TRAR + ++ + RT +++ + TLV
Sbjct: 581 SNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRT-VNNHAFLKTLV 626
Score = 102 (41.0 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKR 329
GPPGTGKT TV ++ ++ + L C P+NVA+ L R L L K+ R
Sbjct: 213 GPPGTGKTTTVVEIILQAVKQGLKILCCAPSNVAVDNLVER-LALCKKRILR 263
Score = 41 (19.5 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 220 DSVVEESCELCSLQRKGIWDEKFGPSLSSTLNEPQVGAVFACLRRL 265
+S V + EL L+R +E+ S+L E Q V CL +L
Sbjct: 7 ESFVAQQLELLELERDAEVEERRSWQEHSSLKELQSRGV--CLLKL 50
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 291 (107.5 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 108/342 (31%), Positives = 167/342 (48%)
Query: 542 DELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNF--LVIDEAAQLKESE 599
DEL C K L + +K L ST S+ L++ + +F +++DEA Q E E
Sbjct: 501 DELIFKCPPLKALTR---YK---LVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPE 554
Query: 600 STIPLQLAGINHAVLI--GDECQLPAMVESKISDGASFGRSLFERLTLLNH-----SKHL 652
+ I + + V++ GD QL ++ S+ ++ G+S ERL ++ ++
Sbjct: 555 NMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYV 614
Query: 653 LDI--QYRMHPSISLFPNLQFYRNQILDGA-NVKSKSYEKHYLPGTEFGPYTFINIIGGR 709
+ YR HP I P+ FY +++ + S ++LP EF P F I G
Sbjct: 615 TKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEF-PMVFYGIQGCD 673
Query: 710 E-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYE 768
E E S N +E+S VI+ +++L Q IGV++PY QV+ I++ + +
Sbjct: 674 EREGNNPSWFNRIEISKVIETIKRLTAN--DCVQEEDIGVITPYRQQVMKIKEVL----D 727
Query: 769 NKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS-------IGFISNPQRVNVALTRAR 821
D VKV SV+ FQG E+ +IIISTVR + +GF+SNP+R NVA+TRA
Sbjct: 728 RLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAI 787
Query: 822 HCLWILGNERTLISSESIWGTLV--C-DAKARQ-CFFKADED 859
L I+GN +I + W L+ C D A Q C E+
Sbjct: 788 SLLVIIGNPH-IICKDMNWNKLLWRCVDNNAYQGCGLPEQEE 828
Score = 79 (32.9 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 234 RKGIWDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLF 293
++ I + F P +S LN Q+ ++ L C + GPPGTGKT T+ +
Sbjct: 382 KRMIKTKPFVP-ISPALNAEQICSIEMVL---GCKGAPPYVIH-GPPGTGKTMTLVEAIV 436
Query: 294 SLLRIK--CRTLACTPTNVAITELASRALRL 322
L + R L C P+N A + + L L
Sbjct: 437 QLYTTQRNARVLVCAPSNSAADHILEKLLCL 467
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 183 (69.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 61/201 (30%), Positives = 97/201 (48%)
Query: 583 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFER 642
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + +S+ R
Sbjct: 23 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 81
Query: 643 LTLL---NHSKHL--------LDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 82 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNK------NLKTNRLTETI 135
Query: 692 LPGTE--FGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVV 749
+E F PY ++ G E+ S N+ E+ +V++I+ KL K +IG++
Sbjct: 136 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 194
Query: 750 SPYTAQVVAIRKKIGSEYENK 770
+ Y AQ I+K + E++ K
Sbjct: 195 THYKAQKTMIQKDLEKEFDKK 215
Score = 171 (65.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 43/110 (39%), Positives = 67/110 (60%)
Query: 765 SEYENKDGFT--VKVKSVDGFQGGEEDIIIISTVRCNT-GGSIGFISNPQRVNVALTRAR 821
S EN T +V +VD FQG ++D II++ VR + GSIGF+++ QR+NV +TRA+
Sbjct: 261 SSLENGATHTGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAK 320
Query: 822 HCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
+ L+ILG+ RTL+ ++ W L+ DA+ R K D N +++ K
Sbjct: 321 YSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTC-DPNYRHDAMKILK 368
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 190 (71.9 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 62/181 (34%), Positives = 90/181 (49%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
++IDEA Q E + IPL L + VL+GD+ QL S I + SLFER+ LL
Sbjct: 807 VIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCF--SLIPN---LSLSLFERV-LL 860
Query: 647 N---HSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFI 703
N + H+LD QYRMHP IS FP +FY + DG + ++ E G P F
Sbjct: 861 NGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSE-----GVISSPLYFW 915
Query: 704 NIIGG-REEFIYHSCR--------NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTA 754
+ G RE+ + + R N E+ + ++L+ L G K IG+++PY+
Sbjct: 916 DTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIIT-KGVKPE-QIGIITPYSG 973
Query: 755 Q 755
Q
Sbjct: 974 Q 974
Score = 159 (61.0 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 29/66 (43%), Positives = 49/66 (74%)
Query: 775 VKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLI 834
+ + S+D FQG E+D +I+S VR NT G IGF+ + +R+NVALTRA++ L ++G+++ L
Sbjct: 1019 IMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQ 1078
Query: 835 SSESIW 840
+ + +W
Sbjct: 1079 NGDKLW 1084
Score = 71 (30.1 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRT---LACTPTNVAITELASRAL 320
GPPGTGKT T+ ++ LL T L +N+AI +A + +
Sbjct: 661 GPPGTGKTSTIYEIILQLLD-SLNTYPILVVAASNIAIDNIAEKLM 705
Score = 42 (19.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 124 ILVLADFKPEKVSDLLRVGRMWTFVSVTMVPDD 156
+++ KPE++ + +S T+V DD
Sbjct: 954 LIITKGVKPEQIGIITPYSGQRDLISATLVKDD 986
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 335 (123.0 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 87/267 (32%), Positives = 143/267 (53%)
Query: 582 EPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFE 641
E ++IDE AQ E + IPL N+ VLIGD QLP + S + +SL E
Sbjct: 1918 EKFERVIIDECAQSIEPSNLIPLGHY-CNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLE 1976
Query: 642 RLTLLNHSK-HLLDIQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKHYLPGTEFG 698
R + + HLL+ Q RMH SI +FPN FY N+ L ANV +++ K +L
Sbjct: 1977 RFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNK-LKTANVTEENRPIIKGFLWPNPKC 2035
Query: 699 PYTFINII----GGREEFIYHSCR-NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYT 753
FI++ G + E Y + + N+ E+ +I +L+ + G + IG+++ Y
Sbjct: 2036 RLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE--GCVSVDEIGILTAYD 2093
Query: 754 AQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRV 813
AQ + ++K + + + +++ S+DGFQG E+D+I+ S VR N +GF+ + +R+
Sbjct: 2094 AQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRL 2153
Query: 814 NVALTRARHCLWILGNERTLISSESIW 840
NV LTRA+ + + G++ TL + + W
Sbjct: 2154 NVMLTRAKRGVILFGDQFTLANDPANW 2180
Score = 56 (24.8 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKC--RTLACTPTNVAITEL 315
GPPGTGKT ++ S + + LA +NVA L
Sbjct: 1798 GPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAANNL 1837
Score = 46 (21.3 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 389 DLLEDCVSQYHIYVEKLKEREDCNENQSEEK 419
D E+ + ++H Y + LK R+ N Q E K
Sbjct: 1858 DFHEEAIMEFHRYKDLLKLRK--NNMQKEAK 1886
Score = 39 (18.8 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 26 SLENIFNQSLFKDQVE-KIPES-FQSVKQYFGSFVFPLLEETRMQL 69
+LEN FN +++ +E KI +Q+ Q+ + L+ R+ +
Sbjct: 887 NLENKFNNNVYSCNIEWKINNKLYQASAQHEHEKIAELVATQRLYM 932
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 335 (123.0 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 87/267 (32%), Positives = 143/267 (53%)
Query: 582 EPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFE 641
E ++IDE AQ E + IPL N+ VLIGD QLP + S + +SL E
Sbjct: 1918 EKFERVIIDECAQSIEPSNLIPLGHY-CNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLE 1976
Query: 642 RLTLLNHSK-HLLDIQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKHYLPGTEFG 698
R + + HLL+ Q RMH SI +FPN FY N+ L ANV +++ K +L
Sbjct: 1977 RFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNK-LKTANVTEENRPIIKGFLWPNPKC 2035
Query: 699 PYTFINII----GGREEFIYHSCR-NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYT 753
FI++ G + E Y + + N+ E+ +I +L+ + G + IG+++ Y
Sbjct: 2036 RLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE--GCVSVDEIGILTAYD 2093
Query: 754 AQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRV 813
AQ + ++K + + + +++ S+DGFQG E+D+I+ S VR N +GF+ + +R+
Sbjct: 2094 AQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRL 2153
Query: 814 NVALTRARHCLWILGNERTLISSESIW 840
NV LTRA+ + + G++ TL + + W
Sbjct: 2154 NVMLTRAKRGVILFGDQFTLANDPANW 2180
Score = 56 (24.8 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKC--RTLACTPTNVAITEL 315
GPPGTGKT ++ S + + LA +NVA L
Sbjct: 1798 GPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAANNL 1837
Score = 46 (21.3 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 389 DLLEDCVSQYHIYVEKLKEREDCNENQSEEK 419
D E+ + ++H Y + LK R+ N Q E K
Sbjct: 1858 DFHEEAIMEFHRYKDLLKLRK--NNMQKEAK 1886
Score = 39 (18.8 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 26 SLENIFNQSLFKDQVE-KIPES-FQSVKQYFGSFVFPLLEETRMQL 69
+LEN FN +++ +E KI +Q+ Q+ + L+ R+ +
Sbjct: 887 NLENKFNNNVYSCNIEWKINNKLYQASAQHEHEKIAELVATQRLYM 932
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 273 (101.2 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 82/224 (36%), Positives = 122/224 (54%)
Query: 627 SKISDGASFGRSLFERLTLLNHS---KHLLDIQYRMHPSISLFPNLQFYRNQILDGANVK 683
S S + +LF+RL H K LLD+QYRM+ SI FP++Q Y NQ+ +V+
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVR 518
Query: 684 SKSYEKHYLPGTEFGPYTFINII-----GGR-EEFIYHSCR-----NMVEVSVVIKILQK 732
S LPG E T I GG E I S N +E+ VV ++K
Sbjct: 519 EISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKK 576
Query: 733 LYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIG-------SEYENKDGFTVKVKSVDGFQG 785
L + V Q IGV++PY+AQV ++K++G S +KDG +++ +VDGFQG
Sbjct: 577 LLSSGV---QPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDG-QIEISTVDGFQG 632
Query: 786 GEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGN 829
E+++II++ VR N IGF+S +R+NVA+TR + L ++G+
Sbjct: 633 REKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGD 676
Score = 154 (59.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 54/156 (34%), Positives = 78/156 (50%)
Query: 571 SSSYKL-HSVKI---EPLNF--LVIDEAAQLKESESTIPLQLAG-INHAVLIGDECQLPA 623
S SY+L +SV E + F ++IDE +Q E + IPL L+ V+ GD QLP
Sbjct: 386 SGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPP 445
Query: 624 MVESKISDGAS----------FGRSLFERLTLLNHS---KHLLDIQYRMHPSISLFPNLQ 670
++++ S+ +S +LF+RL H K LLD+QYRM+ SI FP++Q
Sbjct: 446 TIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQ 505
Query: 671 FYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
Y NQ+ +V+ S LPG E T I
Sbjct: 506 LYDNQLKCDDSVREISLVD--LPGVEINDDTMTKCI 539
Score = 84 (34.6 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 271 SGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASR 318
S + + GPPGTGKT T+ L+ L + L C P+N+++ + R
Sbjct: 237 SNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTILER 284
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 273 (101.2 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 82/224 (36%), Positives = 122/224 (54%)
Query: 627 SKISDGASFGRSLFERLTLLNHS---KHLLDIQYRMHPSISLFPNLQFYRNQILDGANVK 683
S S + +LF+RL H K LLD+QYRM+ SI FP++Q Y NQ+ +V+
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVR 518
Query: 684 SKSYEKHYLPGTEFGPYTFINII-----GGR-EEFIYHSCR-----NMVEVSVVIKILQK 732
S LPG E T I GG E I S N +E+ VV ++K
Sbjct: 519 EISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKK 576
Query: 733 LYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIG-------SEYENKDGFTVKVKSVDGFQG 785
L + V Q IGV++PY+AQV ++K++G S +KDG +++ +VDGFQG
Sbjct: 577 LLSSGV---QPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDG-QIEISTVDGFQG 632
Query: 786 GEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGN 829
E+++II++ VR N IGF+S +R+NVA+TR + L ++G+
Sbjct: 633 REKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGD 676
Score = 154 (59.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 54/156 (34%), Positives = 78/156 (50%)
Query: 571 SSSYKL-HSVKI---EPLNF--LVIDEAAQLKESESTIPLQLAG-INHAVLIGDECQLPA 623
S SY+L +SV E + F ++IDE +Q E + IPL L+ V+ GD QLP
Sbjct: 386 SGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPP 445
Query: 624 MVESKISDGAS----------FGRSLFERLTLLNHS---KHLLDIQYRMHPSISLFPNLQ 670
++++ S+ +S +LF+RL H K LLD+QYRM+ SI FP++Q
Sbjct: 446 TIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQ 505
Query: 671 FYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINII 706
Y NQ+ +V+ S LPG E T I
Sbjct: 506 LYDNQLKCDDSVREISLVD--LPGVEINDDTMTKCI 539
Score = 84 (34.6 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 271 SGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASR 318
S + + GPPGTGKT T+ L+ L + L C P+N+++ + R
Sbjct: 237 SNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTILER 284
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 267 (99.0 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 90/271 (33%), Positives = 140/271 (51%)
Query: 587 LVIDEAAQLKESESTIPLQLAGIN--HA-VLIGDECQLPAMVESKISDGA--SFGRSLFE 641
L+IDE +Q E + IPL +A N H VL GD QLP ++++ + +LF+
Sbjct: 392 LIIDEVSQAMEPQCWIPL-IAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFD 450
Query: 642 RLTLLNHSKHL---LDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFG 698
R+ + + + L++QYRM+ I FP+ Y ++L A V ++ LP +
Sbjct: 451 RIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLID--LPTVDAT 508
Query: 699 PY-----TFINIIG---GREEF--------IYHSCRNMVEVSVVIKILQKLYKAWVGSKQ 742
P T I +I +EF I S N E+++V + ++ L V
Sbjct: 509 PSEDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPEN- 567
Query: 743 MVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGG 802
SIGV+SPY AQV ++K I E + D +++ +VDGFQG E+D+II+S VR N
Sbjct: 568 --SIGVISPYNAQVSHLKKLIHDELKLTD---IEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 803 SIGFISNPQRVNVALTRARHCLWILGNERTL 833
+GF+ +R+NVA+TR R L ++GN L
Sbjct: 623 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVL 653
Score = 86 (35.3 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 246 LSSTLNEPQVGAV-FACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKC---R 301
L+ LN+ Q A+ FA L H GPPGTGKT T+ L+ LL IK R
Sbjct: 204 LNPNLNDSQKTAINFAINNDLTIIH--------GPPGTGKTFTLIELIQQLL-IKNPEER 254
Query: 302 TLACTPTNVAITELASRALRLV 323
L C P+N+++ + R LV
Sbjct: 255 ILICGPSNISVDTILERLTPLV 276
Score = 41 (19.5 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 403 EKLKEREDCNENQSEEKKCRKETEGSKGECKPFLEYVRES 442
+KLK + EN +E K RK+ + K E K + + +S
Sbjct: 324 KKLKNYKQRKENWNEIKLLRKDLK--KREFKTIKDLIIQS 361
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 255 (94.8 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 93/302 (30%), Positives = 149/302 (49%)
Query: 552 KQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINH 611
K+ +K+ A + F+T + ++E + +VIDEA Q E IP+ L G
Sbjct: 631 KETVKEI-LSNAQVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSCWIPI-LQG-KR 687
Query: 612 AVLIGDECQL-PAMVESKISDGASFGRSLFERLTLLNHSKHL---LDIQYRMHPSISLFP 667
+L GD CQL P ++ K +G G SL ER L H L L QYRM+ I+ +
Sbjct: 688 CILSGDPCQLAPVVLSRKALEGG-LGVSLLERAASL-HDGVLATKLTTQYRMNDVIAGWA 745
Query: 668 NLQFYRNQILDGANVKSKSY-EKHYLPGTEFG-----------PYTFINIIGGREEFI-- 713
+ + Y + +V S + ++ T PY +++ G EE +
Sbjct: 746 SKEMYGGWLKSAPSVASHLLIDSPFVKATWITQCPLVLLDTRMPYGSLSV--GCEERLDP 803
Query: 714 --YHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD 771
S N E +V+ + L A V ++I V SPY AQV +R+++ ++ D
Sbjct: 804 AGTGSLYNEGEADIVVNHVISLIYAGVSP---MAIAVQSPYVAQVQLLRERL-DDFPVAD 859
Query: 772 GFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNER 831
G V+V ++D FQG E D +IIS VR N G++GF+ + +R+NVA+TRAR + ++ +
Sbjct: 860 G--VEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSS 917
Query: 832 TL 833
T+
Sbjct: 918 TI 919
Score = 81 (33.6 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 250 LNEPQVGAVFACLRR----LDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLAC 305
L++ V +F +R L + K V + GPPGTGKT + ++ ++ R L
Sbjct: 478 LSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQGERVLVT 537
Query: 306 TPTNVAITELASRALRL 322
PTN A+ + + L L
Sbjct: 538 APTNAAVDNMVEKLLHL 554
Score = 38 (18.4 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 313 TELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLK 353
++LAS R E K D R + C D+L G + LK
Sbjct: 582 SKLAS--FRAELERKKSDLRKDLRQCLRDDVLAAGIRQLLK 620
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 276 (102.2 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 96/328 (29%), Positives = 155/328 (47%)
Query: 556 KDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPL-QLAGINHAVL 614
+ F R + T S + S+KI + +++DEA E E+ IPL Q VL
Sbjct: 2327 RKFELDRHEVILCTCSCAASA-SLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVL 2385
Query: 615 IGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRN 674
+GD QL +V+++ RSLFER + H+LD QYRMH I FP++ FY++
Sbjct: 2386 LGDHKQLRPVVKNERLQNLGLDRSLFERY---HEDAHMLDTQYRMHEGICAFPSVAFYKS 2442
Query: 675 QILDGANVKSK-SYEKHYLPGTEFGPYTFINIIGGREEFIY-------HSCRNMVEVSVV 726
++ ++ S H G E P F ++ G + +S N+ EV+ V
Sbjct: 2443 KLKTWQGLRRPPSVLGH--AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEV 2500
Query: 727 IKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFT-VKVKSVDGFQG 785
++I ++L Q I V++PY AQ I K + ++G V V S+ QG
Sbjct: 2501 VRITKQLTLGRTVEPQ--DIAVLTPYNAQASEISKAL-----RREGIAGVAVSSITKSQG 2553
Query: 786 GEEDIIIISTVR-CNTGGS------------IGFISNPQRVNVALTRARHCLWILGNERT 832
E +++STVR C +GF+ +P +VNVA+TRA+ L ++G +
Sbjct: 2554 SEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIG-DHL 2612
Query: 833 LISSESIWGTLVCDAKARQCFFKADEDR 860
L+ +W +L+ +A+Q A + R
Sbjct: 2613 LLRCCPLWRSLLDFCEAQQTLVPAGQVR 2640
Score = 167 (63.8 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 81/297 (27%), Positives = 137/297 (46%)
Query: 562 RASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQ 620
R + +T S + +L V + + ++IDEAAQ+ E E+ PL A VL GD Q
Sbjct: 640 RHRVVVTTTSQARELR-VPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQ 698
Query: 621 LPAMVESKISDGASFGRSLFERLTLL----NH-----SKHLLDIQYRMHPSISLFPNLQF 671
+ + S ++ + +L RL L H S+ + YR +I F + F
Sbjct: 699 VTPRLFS-VARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHF 757
Query: 672 Y---RNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVI 727
Y N I A K + +HY P F ++ G + + S N+ E++ V+
Sbjct: 758 YVAKGNPI--HARGKVPPHPRHY-------PLMFCHVAGSPDRDMSMASWLNLAEIAQVV 808
Query: 728 KILQKLYKAWV---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQ 784
+ +Q+ Y W G ++ I VVS + AQV A+R+ E +D V V S +
Sbjct: 809 EKVQEAYNTWPSCWGGREQRCICVVS-HGAQVSALRQ----ELRRRDLGQVSVGSFEILP 863
Query: 785 GGEEDIIIISTVR-CNT---GGSIG--FISNPQRVNVALTRARHCLWILGNERTLIS 835
G + ++++STV C + G++ F ++ + +N LTRA+ L ++G+ L S
Sbjct: 864 GRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCS 920
Score = 72 (30.4 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 275 LRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPTNVA 311
L +GP GTGKT T++M ++R + + L CT TN A
Sbjct: 541 LIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSA 578
Score = 47 (21.6 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 278 GPPGTGKT 285
GPPGTGKT
Sbjct: 2174 GPPGTGKT 2181
Score = 43 (20.2 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 80 PYAEVIAFEELKPYG-ANRYGIEVDYWRNTICNS-GKEPYKTLPGDI 124
PY + E P+ A R G+ + WR + ++ G P LPG +
Sbjct: 1772 PYGSLQLAEH--PHALAGRPGLRL-LWRRRVYSAQGSSPPLPLPGTV 1815
Score = 42 (19.8 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 1290 LYRHWDDKTLQKFVELSTEEFFHCIF 1315
LY + L+K + E + HC F
Sbjct: 1109 LYENLPPAALRKLLHAEPERYRHCSF 1134
Score = 41 (19.5 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 30/137 (21%), Positives = 50/137 (36%)
Query: 310 VAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKR 369
V E SR RL+ S + + P P G + L + L PG ++ RV
Sbjct: 1744 VVDVEAGSRCFRLLFPSNRETLPDPCPV-PYGSLQLAEHPHALAGRPGLRLLWRR-RVYS 1801
Query: 370 LMECFAPLS--GW---RHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRKE 424
PL G H + L + + + +++ E + + E + R+
Sbjct: 1802 AQGSSPPLPLPGTVPDPHTLAVETALWKQLLEL--VELQRWPEAAALIQEKGEASQRREL 1859
Query: 425 TEGSKGECKPFLEYVRE 441
+ + C FLE RE
Sbjct: 1860 VQVQRSHCGHFLEVARE 1876
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 303 LACTPTNVAITELASRALRLVK----ESYKRDSR-NNTPFCPLGDILLFGNKDRL-KVNP 356
L C P+N ++ LA LR ++ Y + + P +G L R + N
Sbjct: 2217 LYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQ 2276
Query: 357 GFEEIYLDYRVKR 369
I L +R+++
Sbjct: 2277 SLRSITLHHRIRQ 2289
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 240 (89.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 72/202 (35%), Positives = 107/202 (52%)
Query: 657 YRMHPSISLFPNLQFYRNQILDGAN-VKSKSY-EKHYLPGTEFGPYTFINIIGGRE-EFI 713
YR HPSI PN FY N++ A+ + S+ Y +LP F P F ++G E E
Sbjct: 754 YRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGF-PVIFHGVVGKDEREST 812
Query: 714 YHSCRNMVEVSVVIKILQKLY----KAWVGSKQMVSIGVVSPYTAQVVAIRK--KIGSEY 767
S N E+ ++ L+KL K + IG+++PY QV IR+ KI E
Sbjct: 813 SPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIKIHREL 872
Query: 768 ENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG-------SIGFISNPQRVNVALTR 819
++ G +KV SV+ FQG E +II+STVR + +IGF+ N +R NVA+TR
Sbjct: 873 KSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNVAVTR 932
Query: 820 ARHCLWILGNERTLISSESIWG 841
A+ L ++GN ++ ++ IWG
Sbjct: 933 AKALLIMVGNP-IILRTDEIWG 953
Score = 126 (49.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 60/218 (27%), Positives = 97/218 (44%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHA-----VLIGDECQLPAMVESKISDGASFGRSLFE 641
+ +DEA E E I + +AG+ +A VL GD QL ++ S + G SL E
Sbjct: 669 IFVDEAGHAVEPE--IVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGLGLSLLE 726
Query: 642 RLTLLNH----------SKHLLDI--QYRMHPSISLFPNLQFYRNQILDGAN-VKSKSY- 687
RL N ++++ + YR HPSI PN FY N++ A+ + S+ Y
Sbjct: 727 RLMTQNELYQKGDTGFDNRYVTKLLQNYRSHPSILKVPNELFYDNELKACADEISSRQYC 786
Query: 688 EKHYLPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSI 746
+LP F P F ++G E E S N E+ ++ L+KL +K+ I
Sbjct: 787 TWEHLPKRGF-PVIFHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLLLTQ--AKK--GI 841
Query: 747 GVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQ 784
+SP ++A +K + ++KS+ G +
Sbjct: 842 AKISPKDIGIIAPYRKQVEKIRQAIKIHRELKSLSGIE 879
Score = 79 (32.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 275 LRWGPPGTGKTKTVSMLLFSLLRIK--CRTLACTPTNVAITELASRALRLVKESYKRDSR 332
L +GPPGTGKT T+ + + + R LAC P+N A +L + + S D+R
Sbjct: 547 LVFGPPGTGKTVTIVEAIKQVEKNTGGARILACAPSNSAADQLGEKLIT----SQHVDAR 602
Query: 333 N 333
N
Sbjct: 603 N 603
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 259 (96.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 84/285 (29%), Positives = 139/285 (48%)
Query: 587 LVIDEAAQLKESESTIPL-QLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTL 645
++IDEA E E+ IPL + VL+GD QL +V+++ RSLFER +
Sbjct: 2627 ILIDEAGMATEPETLIPLVAFSKAEKVVLLGDHKQLRPVVKNEQLQNLGLDRSLFERYHV 2686
Query: 646 LNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINI 705
H+LD QYRMH I FP+++FY ++ ++ ++ G E F ++
Sbjct: 2687 ---DAHMLDTQYRMHEGICAFPSMEFYEKKLKTWQGLRRPPSILGHI-GKESCSVIFGHV 2742
Query: 706 IGGREEFIY-------HSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVA 758
G + + +S N EV+ V++I ++L + + + +++PY AQ
Sbjct: 2743 QGHEQSLLVSTDEGNENSKANPEEVAAVVRIAKQLTLG--RTVEPKDVAILTPYNAQAAE 2800
Query: 759 IRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVR-CNTGGS------------IG 805
I K++ E G TV S+ QG E +++STVR C +G
Sbjct: 2801 ISKRLVRE--GVSGVTVC--SITKSQGSEWRYVLVSTVRTCQESDLDQRPTKSWLKRFLG 2856
Query: 806 FISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV--CDAK 848
F+ +P +VNVA+TRAR L ++G+ R L+S +W + C+A+
Sbjct: 2857 FVVDPNQVNVAITRAREGLCVIGDHR-LLSCCPLWRRFLDFCEAQ 2900
Score = 175 (66.7 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 78/300 (26%), Positives = 137/300 (45%)
Query: 568 STASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMVE 626
+T S + +L V + ++IDEAAQ+ E E+ PL+ A VL GD Q+ +
Sbjct: 893 TTTSQARELR-VPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRVVLAGDHMQVTPRLF 951
Query: 627 SKISDGASFGRSLFERL---------TLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQIL 677
S + + G +L RL + S+ + YR +I F + FY +
Sbjct: 952 S-VPRAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRHFY---VA 1007
Query: 678 DGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYH-SCRNMVEVSVVIKILQKLYKA 736
G+ + + P P F ++ G E + S N EV+ V++ ++ L+
Sbjct: 1008 KGSPIHASG---RVPPHPRLHPLMFCHVAGNPERDLSSTSWLNAAEVAQVVEQVRDLHDG 1064
Query: 737 WV---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIII 793
W G+++ I VVS + AQV A+R+ E ++ V V S + G E ++++
Sbjct: 1065 WPSCWGAREQKHICVVS-HGAQVTALRQ----ELRKRNLGQVSVGSFEILPGREFRVVVL 1119
Query: 794 STVR-----CNTG-GSIGFISNPQRVNVALTRARHCLWILGNERTLISS---ESIWGTLV 844
STV ++G S+GF ++ + +N +TRA+ + +GN L SS +W + +
Sbjct: 1120 STVHNHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALCSSGACSKLWKSFI 1179
Score = 70 (29.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 275 LRWGPPGTGKTKTVSMLLFSLLRIK-CRTLACTPTNVA 311
L +GP GTGKT T++M ++R + L CT TN A
Sbjct: 788 LIYGPFGTGKTYTLAMASLEVIRQPHTKVLICTHTNSA 825
Score = 55 (24.4 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 244 PSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLF 293
P TLN Q AV A L+ K ++ GPPGTGKT ++F
Sbjct: 2417 PGGPHTLNRSQNRAVRAALK------KQFTVIQ-GPPGTGKTVVAFHIVF 2459
Score = 45 (20.9 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1291 YRHWDDKTLQKFVELSTEEFFHCIF 1315
Y H TLQK + E + HC F
Sbjct: 1345 YTHLPRATLQKLLCSEPELYRHCAF 1369
Score = 37 (18.1 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 873 SVEIDAESLTSRSQRGKLCYKPKYEKTTLCYDKD-GETY 910
S+ D + + R RG C + + + C D G Y
Sbjct: 2204 SISWDVKQMPQRRLRGSFCLESSF-LSEHCIDLSFGHCY 2241
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 259 (96.2 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 102/364 (28%), Positives = 174/364 (47%)
Query: 495 SEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK-- 552
S+ + K + + FSLA + KR+ L + + V NL + E C K
Sbjct: 1369 SQPVPKKDLNDIKYIFSLARL-KRWSLYITWCDALRSIVTENLPRQIREYREACENFKNA 1427
Query: 553 QLLKDFCFKRASLFF-STASSSYKLHSV--KIEPLNFLVIDEAAQLKESESTIPLQLAGI 609
Q D R ++ +T + +L K+ P L+++EAA++ E+ I ++ +
Sbjct: 1428 QNRVDAEIMRMTMIIGATTTGCSRLRPTLEKVGP-RILIVEEAAEVLEAH-IISAMISTV 1485
Query: 610 NHAVLIGDECQL---PAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSIS-L 665
H V+IGD QL PA+ E ++ G S+FERL L Q+RM+ +IS
Sbjct: 1486 EHVVMIGDHKQLRPNPAVHELGVAYGLRI--SMFERLVERGLPFSQLRQQHRMNLTISDK 1543
Query: 666 FPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSV 725
L FY N + D NV + F +T + +E S N E+S+
Sbjct: 1544 IVKLSFYDN-VTDAENVGLYPDVQGMATNLFFWSHTSME--ESPDEV---SWLNKHEISM 1597
Query: 726 VIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEY-ENKDGFTVKVKSVDGFQ 784
+ +++ L K + +V V++ Y+AQ + ++ + + D + V++VD FQ
Sbjct: 1598 TVALVKHLLKQNYTTNDIV---VLATYSAQKNLMYREYANVFGSTPDSNVIPVETVDSFQ 1654
Query: 785 GGEEDIIIISTVRCNTGG----SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
G E I+I+S VR + GG IGF++ R+ VALTRA+H ++I+GN ++++ +W
Sbjct: 1655 GKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTRAQHGMYIIGNGAYIMNNSELW 1714
Query: 841 GTLV 844
+V
Sbjct: 1715 NKIV 1718
Score = 65 (27.9 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 270 KSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTP------TNVAITELASRALRLV 323
K + L GPPGTGKT ++ ++L+ + P TN + L R +++
Sbjct: 1053 KYELSLIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTNSGLDNLLERIYQMI 1112
Query: 324 KESYKRDSRNNTPFCPLGDILLFGNK---DRLK-VNPGFEEIYLDYRVK 368
+ + N P I+ FG+K + LK N +++Y Y+ K
Sbjct: 1113 ENDEELSKDNGRP-----KIIRFGSKCDSNYLKRQNVMRQDVYEQYKSK 1156
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 257 (95.5 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 98/330 (29%), Positives = 157/330 (47%)
Query: 561 KRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQ-LAGINHAVLIGDEC 619
+R S+ T S + S+K + ++IDEA E E+ IPL + VL+GD
Sbjct: 2627 ERHSVILCTCSCAAS-GSLKALNVRQILIDEAGMATEPETLIPLVCFSKTEKVVLLGDHK 2685
Query: 620 QLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
QL +V+++ RSLFER + +LD QYRMH I FP+++FY ++
Sbjct: 2686 QLRPVVKNEQLRNLGMDRSLFERY---HRDAIMLDTQYRMHKDICSFPSMEFYGGKLKTW 2742
Query: 680 ANVKSK-SYEKHYLPGTEFGPYTFINIIGGREEFIY-------HSCRNMVEVSVVIKILQ 731
+++K S H G + P F ++ G ++ + +S N EV+ V++I++
Sbjct: 2743 SDLKRPPSLLGHV--GKQSCPVIFGSVQGYEQKLLVSTEEGNENSRANPEEVTEVVRIIK 2800
Query: 732 KL-YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDI 790
+L V K + V++PY AQ AI + G G TV S+ QG E
Sbjct: 2801 QLTLDRTVDPKD---VAVLTPYNAQAAAISR--GLMQRGVTGVTVT--SITKSQGSEWRY 2853
Query: 791 IIISTVR-CNTGGS------------IGFISNPQRVNVALTRARHCLWILGNERTLISSE 837
+I+STVR C +GF+ +P +VNVA+TRA+ L I+G + L+
Sbjct: 2854 VIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIG-DHLLLRCC 2912
Query: 838 SIWGTLVCDAKARQCFFKADEDRNLAKARL 867
+W L+ +A+ A+ R K+ L
Sbjct: 2913 PLWHRLLGFCEAQNSLVPAERVRVQRKSAL 2942
Score = 187 (70.9 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 89/321 (27%), Positives = 143/321 (44%)
Query: 562 RASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLA-GINHAVLIGDECQ 620
R L +T S + +L V + + IDEAAQ+ E E+ IPL A + VL GD Q
Sbjct: 885 RHRLVVTTTSQARELQ-VPAGFFSHIFIDEAAQMLECEALIPLSYALTLTRVVLAGDHMQ 943
Query: 621 LPAMVESKISDGASFGRSLFERLTLL---------NHSKHLLDIQYRMHPSISLFPNLQF 671
+ + S D A+ G L RL L HS+ + YR +I F + F
Sbjct: 944 VTPRLFSVPRDKAA-GHMLLHRLFLYYQQEVHKIAQHSRIVFHENYRSTAAIINFVSRHF 1002
Query: 672 Y--RNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYH-SCRNMVEVSVVIK 728
Y + + A+ K + +HY P F ++ G E+ + S N EV+ V++
Sbjct: 1003 YVAKGNPIQ-ASGKVPRHPQHY-------PLMFCHVAGSPEQDMSRTSWLNSAEVTQVVE 1054
Query: 729 ILQKLYKAWV---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQG 785
+Q++Y W G ++ I VS + AQV A+R+ E ++ V V S + G
Sbjct: 1055 KVQEIYNTWPHCWGPREQRHICAVS-HGAQVSALRQ----ELRRRNLGEVSVGSFEILPG 1109
Query: 786 GEEDIIIISTVRC-NTGGSIG-----FISNPQRVNVALTRARHCLWILGNERTLISS--- 836
E ++++S+V N+ S G F + P+ +N +TRA+ L +G+ L SS
Sbjct: 1110 REFRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGAC 1169
Query: 837 ESIWGTLVCDAKARQCFFKAD 857
+W + + F D
Sbjct: 1170 RKLWKNFIRECIEHHSIFPED 1190
Score = 66 (28.3 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 275 LRWGPPGTGKTKTVSMLLFSLLRIK-CRTLACTPTNVA 311
L +GP GTGKT T++M +++ + L CT TN A
Sbjct: 786 LIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHTNSA 823
Score = 47 (21.6 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 278 GPPGTGKT 285
GPPGTGKT
Sbjct: 2468 GPPGTGKT 2475
Score = 38 (18.4 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 1080 MMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHW 1118
++++Q D ++ + +RG +S +++ L HW
Sbjct: 2328 VLSKQLPDLRKEEAVRGLKNASPLVISIALGLPILEPHW 2366
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 179 (68.1 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 69/202 (34%), Positives = 98/202 (48%)
Query: 657 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTEFGPYTFINIIGG--RE 710
YR H ++ P+ FY ++ D V S +EK LP F P F + G RE
Sbjct: 337 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEARE 393
Query: 711 --EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYE 768
+ S V+V +L + + V SK IGV++PY QV +KI
Sbjct: 394 GRSPSWFSPAEAVQVMRYCCLLARNVSSQVSSKD---IGVITPYRKQV----EKIKILLR 446
Query: 769 NKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS------IGFISNPQRVNVALTRARH 822
N D +KV SV+ FQG E +I+ISTVR N +GF+SN +R NVA+TR +
Sbjct: 447 NVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKA 506
Query: 823 CLWILGNERTLISSESIWGTLV 844
L +LGN L+ + +G L+
Sbjct: 507 LLIVLGNPHVLVR-DPCFGALL 527
Score = 96 (38.9 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 562 RASLFFSTASSS---YKLHSVKIEPLNFLVIDEAAQLKESESTIPLQL-AGIN-HAVLIG 616
R + +T SS+ Y++ V++ + +DEA Q E E IPL L + IN VL G
Sbjct: 221 RFRIIITTCSSAGLFYQI-GVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAG 279
Query: 617 DECQLPAMVESKISDGASFGRSLFERL 643
D QL +++S+++ S+ ERL
Sbjct: 280 DPMQLGPVIKSRLAMAYGLNVSMLERL 306
Score = 74 (31.1 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 239 DEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTV--SMLLFSLL 296
D++F + LNE Q AV L DC + + +GPPGTGKT T+ ++L
Sbjct: 102 DKEF---FNPVLNENQKLAVRRILSG-DC--RPLPYILFGPPGTGKTVTIIEAVLQVHYA 155
Query: 297 RIKCRTLACTPTNVA 311
R L C P+N A
Sbjct: 156 LPDSRILVCAPSNSA 170
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 249 (92.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 100/321 (31%), Positives = 149/321 (46%)
Query: 569 TASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 628
T SS+ K ++ ++IDE A E E+ IPL VL+GD Q+ +V+
Sbjct: 185 TCSSALKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQIVLLGDHQQIRPIVQCG 244
Query: 629 ISDGASFGRSLFER-LTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN-----V 682
+SLFER + L N +LD QYRMH I FP+ +FY ++ GA +
Sbjct: 245 HVKNKGMEKSLFERYMDLAN----MLDTQYRMHAEICSFPSDEFYDGKLKTGAERGPCCL 300
Query: 683 KSKSYEKH-YLPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSK 741
+KS E L G G ++++ E+ +S N E + + L K S
Sbjct: 301 LNKSKEPTAMLFGHIEGKE--VSLVVSTEKGNENSMANTEEAEQAVCVADLLIKQSGVSP 358
Query: 742 QMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVR-CNT 800
+ ++I ++PY AQV I+ + E K+ V V +V QG E +I+STVR C+T
Sbjct: 359 EHIAI--LTPYNAQVSEIKMTL----EKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCST 412
Query: 801 ---------------GGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVC 845
G +GF+++ +VNVA+TRA+ L ILGN L E +W L+
Sbjct: 413 SDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLD 471
Query: 846 DAKARQCFFKADED-RNLAKA 865
+ C D R AKA
Sbjct: 472 HYYRKSCVVNPASDIRVKAKA 492
Score = 49 (22.3 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 278 GPPGTGKTKTVSMLLFSLLR 297
GPPGTGKT ++F +
Sbjct: 22 GPPGTGKTVVGIHIVFQFFK 41
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 246 (91.7 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 95/309 (30%), Positives = 144/309 (46%)
Query: 581 IEPLNF--LVIDEAAQLKESESTIPLQLAGINHA---VLIGDECQLPAMVESKISDGASF 635
+E LN ++IDE A E E+ IPL HA VL+GD QL +V +
Sbjct: 2265 LEKLNVKQILIDECAMSTEPETLIPL--VSHKHAEKVVLLGDHKQLKPVVNNDFCKSLGM 2322
Query: 636 GRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN---VKSKSYEKHYL 692
SLFER +LD QYRMH +I FP+ +FY +++ + S Y K+
Sbjct: 2323 ETSLFERY---QKQAWMLDTQYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSVLYHKN-- 2377
Query: 693 PGTEFGPYTFINIIGGREEFIY-------HSCRNMVEVSVVIKILQKLYKAWVGSKQMVS 745
P F ++ G + + +S N EV ++ ++L G+ + S
Sbjct: 2378 --NRCCPIIFGHVEGKEQSLVISTEEGNENSKANPEEVEQAVRTAKQL--TLDGTIRPQS 2433
Query: 746 IGVVSPYTAQVVAIRKKIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVR-CN---- 799
I ++SPY AQV I K++ K+G V V ++ QG E +I+STVR C+
Sbjct: 2434 IAILSPYNAQVSEINKRL-----LKEGIRGVTVCTIMKSQGSEWRYVILSTVRSCSRHEI 2488
Query: 800 ----TGG----SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQ 851
T +GF+++P +VNVA+TRA+ L I+GN R L+ +W L+
Sbjct: 2489 DKKPTKSWQKKHLGFVTDPNQVNVAITRAQEGLCIIGN-RYLLECNPLWRRLLQHYIDHN 2547
Query: 852 CFFKADEDR 860
C+ E R
Sbjct: 2548 CYTSGQEIR 2556
Score = 182 (69.1 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 92/336 (27%), Positives = 148/336 (44%)
Query: 579 VKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMVESKISDGASF 635
+K+ P F ++IDEAAQ+ E E+ IPL A VL GD Q+ + ++DG S
Sbjct: 651 LKVAPGYFTHIMIDEAAQMLECEALIPLSYATFETRIVLAGDHMQITPKLFC-VADGQSA 709
Query: 636 GRSLFERL-TLLNHSKH--------LLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 686
+L RL KH + + YR I F + FY I G + +
Sbjct: 710 YHTLLNRLFQFYQKEKHEVAMKSRIIFNENYRSTAGIIEFVSKHFY---IGKGNAIHASG 766
Query: 687 YEKHYLPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWV---GSKQ 742
+ P E P F ++ G E + S N E++ V++ ++++Y+ W G++
Sbjct: 767 ---NIPPHPEIYPLMFCHVPGVAERDMSMISWHNASEITQVVEKVEEIYQRWPHEWGAQD 823
Query: 743 MVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTV------ 796
I VVS + QV AIR+ E K V V++ + G E +IIISTV
Sbjct: 824 QKRICVVS-HGVQVSAIRQ----ELRKKQLPEVVVENYENLPGREFRVIIISTVHTSESL 878
Query: 797 RCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISS---ESIWGTLVCDAKARQCF 853
R + + F + + +N +TRA+ + ++G+ L S +W + ++C
Sbjct: 879 RVSASHNHEFFNEARVLNTIMTRAQSQVIVVGDAVALCSHGQCSKVWKRFI-----QECI 933
Query: 854 FKAD-EDRNLAKARLEVSKESVEIDAESLTSRSQRG 888
K NL A++ K++ D ES RS G
Sbjct: 934 EKGSISPANLTMAQI---KQAA-CDKESWCRRSPEG 965
Score = 74 (31.1 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 275 LRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPTNVA 311
L +GP GTGKT T++M ++R R L CT TN A
Sbjct: 538 LIYGPFGTGKTFTLAMATLEVIRQPNTRVLICTHTNSA 575
Score = 47 (21.6 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 278 GPPGTGKT 285
GPPGTGKT
Sbjct: 2089 GPPGTGKT 2096
Score = 45 (20.9 bits), Expect = 9.4e-17, Sum P(3) = 9.4e-17
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 352 LKVNPG-FEEIYLDYRVKRLMECFA--PLS 378
LKV PG F I +D +++EC A PLS
Sbjct: 651 LKVAPGYFTHIMID-EAAQMLECEALIPLS 679
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 1307 TEEFFHCIFPLDWRESL 1323
T+ +F +FPL+ RESL
Sbjct: 1670 TDRYFKALFPLN-RESL 1685
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 186 (70.5 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 69/200 (34%), Positives = 98/200 (49%)
Query: 657 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTEFGPYTFINIIGGR-EE 711
YR H ++ + P+ FY ++ D V S +EK LP F P F + G E
Sbjct: 972 YRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEK--LPKKGF-PLIFHGVRGSEARE 1028
Query: 712 FIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVS-IGVVSPYTAQVVAIRKKIGSEYENK 770
S N E V++ L + + S+ S IGV++PY QV IR + N
Sbjct: 1029 GKSPSWFNPAEAVQVLRYCCLLAHS-ISSQVSASDIGVITPYRKQVEKIRILL----RNV 1083
Query: 771 DGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS------IGFISNPQRVNVALTRARHCL 824
D +KV SV+ FQG E +IIISTVR N +GF+SN +R NVA+TR + L
Sbjct: 1084 DLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1143
Query: 825 WILGNERTLISSESIWGTLV 844
+LGN L+ + +G L+
Sbjct: 1144 IVLGNPHVLVR-DPCFGALL 1162
Score = 94 (38.1 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 541 LDELNLPCTTSKQLLKDFCFKRASLFFSTASSS---YKLHSVKIEPLNFLVIDEAAQLKE 597
+D + C + + K F+ + +T SSS Y++ V++ + +DEA Q E
Sbjct: 838 IDAVKPYCRDGEDIWKASRFR---IIITTCSSSGLFYQI-GVRVGHFTHVFVDEAGQASE 893
Query: 598 SESTIPLQL-AGIN-HAVLIGDECQLPAMVESKISDGASFGRSLFERL 643
E IPL L + I+ VL GD QL +++S+++ S ERL
Sbjct: 894 PECLIPLGLMSDISGQIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERL 941
Score = 74 (31.1 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTV--SMLLFSLLRIKCRTLACTP 307
LNE Q AV L DC + + +GPPGTGKT T+ ++L R L C P
Sbjct: 745 LNENQKLAVKRILSG-DC--RPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAP 801
Query: 308 TNVA 311
+N A
Sbjct: 802 SNSA 805
Score = 49 (22.3 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 295 LLRIKCRTLACTPTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDILLFGNKDRLKV 354
LL + +A N L + + V + ++ DSRN+ G +L G L
Sbjct: 70 LLNVGQEVIAVVEENKVSNGLKAIRVEAVSDKWEDDSRNHGSPSDCGPRVLIGCVTSLVE 129
Query: 355 NPGFEEIYLDYRVKRLMECFAPLSG-W 380
G + ++ + E F P G W
Sbjct: 130 GAGCISQTTYFSLESVCEGFEPCKGDW 156
Score = 42 (19.8 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 352 LKVNPGFEEIY 362
LK+NP FE+ Y
Sbjct: 614 LKINPEFEQAY 624
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 213 (80.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 88/289 (30%), Positives = 147/289 (50%)
Query: 577 HSV-KIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKIS-DGA 633
HS+ ++ +IDEA+Q+ PLQLA VL+GD QLP +V+ S+ S DG
Sbjct: 1051 HSIFNKRKFDYCIIDEASQIPLPICLGPLQLA--EKFVLVGDHYQLPPLVKNSRTSKDGL 1108
Query: 634 SFGRSLFERLTLLNHSKHL--LDIQYRMHPSISLFPNLQFYRNQILDGANVKS------- 684
S SLF+ L+ H + + L +QYRM+ I+ + Y ++ G+ S
Sbjct: 1109 SL--SLFKLLSE-KHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILP 1165
Query: 685 KSYEKHYLPGTEFGPYTFINIIGGREEFIYHSCRNMVEV-SVVIKILQKLYKAWV----- 738
K++ LP + + +I I+ + +++ V S IL+ +A++
Sbjct: 1166 KAHLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIEQAV 1225
Query: 739 ------GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIII 792
G KQ SIG++S Y +QV + K + S E +++ +VD +QG ++DII+
Sbjct: 1226 SSFLERGVKQS-SIGIISIYKSQVELLSKNLKSFTE------IEINTVDRYQGRDKDIIL 1278
Query: 793 ISTVRCNTGGSIG-FISNPQRVNVALTRAR-HCLWILGNERTLISSESI 839
IS VR N+ +G + + R+NVAL+RA+ C+ + G+ TL SS +
Sbjct: 1279 ISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCI-MFGSLSTLSSSNIV 1326
Score = 91 (37.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 244 PSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTL 303
P LNE Q+ A+ C +H S L G PGTGKT T+S L+ SLL K + L
Sbjct: 926 PEFLKCLNEDQITALKKCHA---AEHYS---LILGMPGTGKTTTISSLIRSLLAKKKKIL 979
Query: 304 ACTPTNVAITEL 315
+ T++A+ +
Sbjct: 980 LTSFTHLAVDNI 991
Score = 51 (23.0 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 27/110 (24%), Positives = 46/110 (41%)
Query: 176 LQVHDGT--KKSFFFIYLTNILPSKRIWNSLHMCGNWKVITQVLGTDSVVEESCELCSLQ 233
L+VH+ + F L IL + I + L + G+W + +G DS+ E+
Sbjct: 363 LEVHEDFIFHEGNHFRQLKLILEANDILHQLFLRGDWTETSIFVG-DSIRVEAT--FDKD 419
Query: 234 RKGIWDEKFGPSL---SSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPP 280
I D G + ++ V + F CLR+ + G+ +GPP
Sbjct: 420 NTAIVDNDKGLIIIHPKILMSATAVASSFPCLRKAVISDRVGI---YGPP 466
Score = 39 (18.8 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 463 KTYISENSFQDMVA--LKSLLDSFRSLLFQKNVVSEEL 498
KTYIS+ F D+ ++ LD+ LL K++V L
Sbjct: 503 KTYISDIYFADLSLDEIREELDARLPLL--KSIVERYL 538
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 181 (68.8 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 70/202 (34%), Positives = 98/202 (48%)
Query: 657 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTEFGPYTFINIIGG--RE 710
YR H ++ P+ FY ++ D V S +EK LP F P F + G RE
Sbjct: 974 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLIFHGVRGNEARE 1030
Query: 711 --EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYE 768
+ S V+V +L + + V SK IGV++PY QV +KI
Sbjct: 1031 GRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKD---IGVITPYRKQV----EKIKILLR 1083
Query: 769 NKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS------IGFISNPQRVNVALTRARH 822
N D +KV SV+ FQG E +I+ISTVR N +GF+SN +R NVA+TR +
Sbjct: 1084 NVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKA 1143
Query: 823 CLWILGNERTLISSESIWGTLV 844
L ILGN L+ + +G L+
Sbjct: 1144 LLIILGNPHVLVR-DPCFGALL 1164
Score = 98 (39.6 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 541 LDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESES 600
+D + C + + + F+ S+A Y++ V++ + +DEA Q E E
Sbjct: 840 IDAIKPYCRDGEDIWRASRFRIIITTCSSAGLFYQI-GVRVGYFTHVFVDEAGQASEPEC 898
Query: 601 TIPLQL-AGIN-HAVLIGDECQLPAMVESKISDGASFGRSLFERL 643
IPL L + IN VL GD QL +++S+++ S+ ERL
Sbjct: 899 LIPLGLISDINGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERL 943
Score = 74 (31.1 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 239 DEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTV--SMLLFSLL 296
D++F + LNE Q AV L DC + + +GPPGTGKT T+ ++L
Sbjct: 739 DKEF---FNPVLNENQKLAVRRILSG-DC--RPLPYILFGPPGTGKTVTIIEAVLQVHYA 792
Query: 297 RIKCRTLACTPTNVA 311
R L C P+N A
Sbjct: 793 LPDSRILVCAPSNSA 807
Score = 52 (23.4 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 340 LGDILLFGNKD-RLKVNPGFEEIY 362
+G ++ +D LK+NPGFE++Y
Sbjct: 541 IGYVMEIHEEDVTLKLNPGFEQMY 564
Score = 39 (18.8 bits), Expect = 6.1e-13, Sum P(3) = 6.1e-13
Identities = 17/88 (19%), Positives = 34/88 (38%)
Query: 295 LLRIKCRTLACTPTNVAITELASRALRLVKESYKRDSRNNTP-FCPLGDILLFGNKDRLK 353
LL + +A N L + + V + ++ DS+N++ +L G +
Sbjct: 18 LLNVGQEVIAVVEENKVSNGLKAIRVEAVSDKWEDDSKNSSKGLSDSSPRVLIGCVTSML 77
Query: 354 VNPGFEEIYLDYRVKRLMECFAPLSG-W 380
G+ + ++ + E F P G W
Sbjct: 78 EGAGYISQTTYFSLESVCEGFHPCKGDW 105
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 174 (66.3 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 62/188 (32%), Positives = 94/188 (50%)
Query: 657 YRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY--LPGTEFGPYTFINIIGGREEFIY 714
YR H ++ P+ FY ++ A+ S H+ LP F P F + G+E
Sbjct: 979 YRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGF-PLIFHGV-RGKETREG 1036
Query: 715 HSCR--NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDG 772
HS N E V++ L K + + IGV++PY QV I+ + S + D
Sbjct: 1037 HSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQVEKIKFLLRS-IDLSD- 1094
Query: 773 FTVKVKSVDGFQGGEEDIIIISTVRC--NTGGS----IGFISNPQRVNVALTRARHCLWI 826
+KV +V+ FQG E + I+STVR +T +GF+SNP+R NVA+TRA+ L +
Sbjct: 1095 --IKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAITRAKALLIV 1152
Query: 827 LGNERTLI 834
+GN L+
Sbjct: 1153 IGNPHLLV 1160
Score = 109 (43.4 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 541 LDELNLP-CTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESE 599
+D++ P C + K F+ S+A Y+ ++ +++DEA Q E E
Sbjct: 844 IDDIVKPYCKDGDDIWKAVWFRIIITTCSSAGMFYQT-GTRLGHFTHVILDEAGQASEPE 902
Query: 600 STIPLQLAG-IN-HAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLD 654
S IP+ L +N VL+GD QL +++S+I+ SL ERL ++ +L D
Sbjct: 903 SLIPIGLISEVNGQIVLVGDPKQLGPLIKSRIAVAFGLNISLLERL--ISRDMYLRD 957
Score = 79 (32.9 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 40/112 (35%), Positives = 53/112 (47%)
Query: 213 ITQVLGTDSVVEESCELCSLQRKGIWDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSG 272
+T + T +VEE+ E R G E F P L N+ Q AV L +C +
Sbjct: 724 VTASVETSQLVEET-ETIKW-RAG---EFFNPML----NKQQKLAVKRILSG-EC--RPT 771
Query: 273 VELRWGPPGTGKTKTV--SMLLFSLLRIKCRTLACTPTNVAITELASRALRL 322
+ +GPPGTGKT TV ++L R L C P+N A T+L LRL
Sbjct: 772 PYILFGPPGTGKTITVVEAILQIHFTLPDSRILVCAPSNAA-TDLI--CLRL 820
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 103 DYWRNTICNSGKEPYKTLPGDILVLA 128
DY +T CN+ + K L G+I L+
Sbjct: 52 DY--STACNASELRMKILVGNITSLS 75
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 258 (95.9 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 90/309 (29%), Positives = 149/309 (48%)
Query: 562 RASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPL-QLAGINHAVLIGDECQ 620
R L + ++S L V I + ++DEA E E+ IPL + + VL+GD Q
Sbjct: 2567 RVLLCTCSCAASASLRDVNIRQI---LVDEAGLASEPETLIPLVSFSQVEKVVLLGDHKQ 2623
Query: 621 LPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQIL--D 678
L +V+S+ RSL +R +LD+QY +H SI FP+++FY+ ++
Sbjct: 2624 LRPVVKSEQLQNLGLDRSLLQRY---RRDASMLDLQYCVHESICAFPSMEFYKKKLKTWQ 2680
Query: 679 GANVKSK--SYEKHYLPGTEFGPYTFI--NIIGGREEFIYHSCRNMVEVSVVIKILQKLY 734
G + Y K FG +++ EE +S N + ++V+ + ++L
Sbjct: 2681 GLRLPPSILGYGKENC-SVIFGDVQSPEESLVVSTEEGRENSKVNKEQAALVVCLAKQLV 2739
Query: 735 KAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIS 794
V K M +++PY AQV+ I K++ E G TV S+ QG + +++S
Sbjct: 2740 SGRVDPKDMA---ILTPYHAQVLEISKRL--EEARVAGVTVC--SITKSQGRQWRYVLVS 2792
Query: 795 TVR-CNTGG------------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWG 841
TVR C S+GF+ +P +VNVALTRA+ LW++G +R L+ +W
Sbjct: 2793 TVRTCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVG-DRLLLRCCPLWS 2851
Query: 842 TLV--CDAK 848
+ C+A+
Sbjct: 2852 RFLDFCEAQ 2860
Score = 60 (26.2 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIK-CRTLACTPTN 309
GP GTGKT ++M ++R + L CT TN
Sbjct: 788 GPFGTGKTYALAMASLEVIRQPGTKVLICTHTN 820
Score = 51 (23.0 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 200 IWNSLHMCGNWKVITQV--LGTDSVVEESCELCSLQ-RKGIWDEKFGPSLSSTLNEPQVG 256
+W + + + + T++ L T V S + SL RKG+ FGPS +++ Q
Sbjct: 1788 VWKCIQLAAHSRDFTRLADLITTDDVHPSLAVASLDWRKGLGRAGFGPS---SVSREQAN 1844
Query: 257 AVFA 260
FA
Sbjct: 1845 THFA 1848
Score = 47 (21.6 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 278 GPPGTGKT 285
GPPGTGKT
Sbjct: 2406 GPPGTGKT 2413
Score = 44 (20.5 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 119 TLPGDILVLADFKPEKVSDLLR-VGRMWTF 147
T P +IL LA FKP S L R V R TF
Sbjct: 54 TCPCEIL-LARFKPAAKSSLWRKVDRPPTF 82
Score = 41 (19.5 bits), Expect = 4.3e-14, Sum P(4) = 4.3e-14
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 203 SLHMCGN-WK-VITQVLGTDSVVEESCELCSLQRKGIWDEKF 242
S C WK I + + S+ E L +Q+ +W +++
Sbjct: 1164 SFGTCSRLWKGFIRECVAHQSICPEGLSLEQIQQSVVWRQRW 1205
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 224 (83.9 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 70/209 (33%), Positives = 109/209 (52%)
Query: 653 LDIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYEK-HYLPGTEFGPYTFINIIGGRE 710
L + YR HP I PN FY ++ A+ + S Y +LP F P F + G E
Sbjct: 755 LIMNYRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGF-PVIFHGVPGKDE 813
Query: 711 -EFIYHSCRNMVEVSVVIKILQKLY----KAWVGSKQMVSIGVVSPYTAQVVAIRKKIGS 765
E S N+ E+++++ L+KL K + IG+++PY QV I++ I +
Sbjct: 814 RESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRAIDA 873
Query: 766 EYENKD--GF-TVKVKSVDGFQGGEEDIIIISTVRCNTGG-------SIGFISNPQRVNV 815
+ + +D G +KV SV+ FQG E +I++STVR + +IGF+ N +R NV
Sbjct: 874 DKDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEKRFNV 933
Query: 816 ALTRARHCLWILGNERTLISSESIWGTLV 844
A+TRA+ L ++GN L + ES WG +
Sbjct: 934 AVTRAKSLLIMVGNPMILRTDES-WGRFI 961
Score = 111 (44.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 52/169 (30%), Positives = 79/169 (46%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHA-----VLIGDECQLPAMVESKISDGASFGRSL 639
NF +DEA ESE+ I +AG+ +A VL GD QL ++ S ++ SL
Sbjct: 674 NF--VDEAGHAVESETII--SVAGLLNAEKGQLVLAGDPKQLGPILRSPLAINHGLDVSL 729
Query: 640 FERLTLLNH----------SKHL--LDIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKS 686
ERL N ++++ L + YR HP I PN FY ++ A+ + S
Sbjct: 730 LERLMTQNDLYKRGDVEFDNRYVSKLIMNYRSHPYILEVPNRLFYDGELKACADEISSNQ 789
Query: 687 YEK-HYLPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKL 733
Y +LP F P F + G E E S N+ E+++++ L+KL
Sbjct: 790 YCMWEHLPSKGF-PVIFHGVPGKDERESNSPSFFNIYEINILVDYLKKL 837
Score = 71 (30.1 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 275 LRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRAL 320
L +GPPGTGKT T+ + + + LAC P+N A +L + +
Sbjct: 552 LVFGPPGTGKTVTIVEAIKQVEKNIPDAYILACAPSNSAADQLCEKLI 599
Score = 42 (19.8 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 594 QLKESESTIPLQLAGINHA-----VLIGDECQLPAMVESKISDGASFGRSLFERLTLLN 647
+LK+ +S + L N+A +L +ECQ+ ++ D + R +RL LN
Sbjct: 353 KLKDLQSLLQSPLTFDNYAERFDLLLYLEECQMHVDIKRYNKDSVTLHRDRDKRLMGLN 411
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 181 (68.8 bits), Expect = 7.3e-16, Sum P(3) = 7.3e-16
Identities = 67/199 (33%), Positives = 93/199 (46%)
Query: 657 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTEFGPYTFINIIGGR-EE 711
YR H ++ P+ FY ++ D V S +EK LP F P F + G E
Sbjct: 970 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEK--LPRKGF-PLVFHGVRGTEARE 1026
Query: 712 FIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD 771
S N E V++ L ++ IGV++PY QV +KI N
Sbjct: 1027 GRSPSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQV----EKIKILLRNVG 1082
Query: 772 GFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS------IGFISNPQRVNVALTRARHCLW 825
VKV SV+ FQG E +IIISTVR N +GF+SN +R NVA+TR + L
Sbjct: 1083 LAEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 1142
Query: 826 ILGNERTLISSESIWGTLV 844
+LGN L+ + +G L+
Sbjct: 1143 VLGNPHVLVRQDPCFGALL 1161
Score = 92 (37.4 bits), Expect = 7.3e-16, Sum P(3) = 7.3e-16
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 541 LDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESES 600
LD + C + + + F+ S+A Y++ +++ + +DEA Q E E
Sbjct: 836 LDAIKPYCRDGEDVWRASRFRVVITTCSSAGLFYQI-GLRVGHFTHVFVDEAGQASEPEC 894
Query: 601 TIPLQL-AGIN-HAVLIGDECQLPAMVESKISDGASFGRSLFERL 643
IPL L + I+ +L GD QL +++S+++ S+ ERL
Sbjct: 895 LIPLGLISDIDGQIILAGDPMQLGPVIKSRLAMAYGLNVSMLERL 939
Score = 74 (31.1 bits), Expect = 7.3e-16, Sum P(3) = 7.3e-16
Identities = 26/64 (40%), Positives = 30/64 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTP 307
LNE Q AV L DC V +GPPGTGKT TV + + R L C P
Sbjct: 743 LNENQQLAVKRILSG-DCRPLPYV--LFGPPGTGKTVTVIEAVLQVFHALPDSRILVCAP 799
Query: 308 TNVA 311
+N A
Sbjct: 800 SNSA 803
Score = 42 (19.8 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 25/99 (25%), Positives = 37/99 (37%)
Query: 352 LKVNPGFEEIY----LD----YRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVE 403
LK+NP FE+ Y +D Y C L H + ++ E + +
Sbjct: 615 LKLNPEFEQTYNFEPMDVEFTYNRTTSRRCHFALEQVVHLGAKVLFPEEVILQSPQVTWN 674
Query: 404 KLKEREDCNENQSEEKKCRKETEGSKGECKPFLEYVRES 442
R+ + QS K RK T K + KP E R +
Sbjct: 675 WSHARDPPQDGQSTSKNNRKAT---KDQTKPAPEEQRRA 710
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 221 (82.9 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 86/269 (31%), Positives = 131/269 (48%)
Query: 587 LVIDEAAQLKESESTIPLQLAGIN-----HAVLIGDECQLPAMVESKISDGASFGRSLFE 641
+ IDEA E E+ I + GI H +L GD QL A+++S + RSL E
Sbjct: 474 IFIDEAGASTEPEALIGIM--GIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLME 531
Query: 642 RLTLL---------NHSKHL---LDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 689
RL N+ ++ L YR HP I N +Y ++ A +
Sbjct: 532 RLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAA 591
Query: 690 HY--LPGTEFGPYTFINIIG--GREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVS 745
++ L +F P F G RE+ S N+ E V+ +++L V ++
Sbjct: 592 NWSVLTNPQF-PIIFQATHGVTNREQNSTSSYNNL-EAEVICWYVKRLINDRVVGQE--D 647
Query: 746 IGVVSPYTAQVVAIRKKIGSE-YENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSI 804
+G+V+PYTAQ + K + S+ Y N V+V SV+ +QG E+ III S V+ T ++
Sbjct: 648 VGIVAPYTAQGKLVTKLLQSKGYPN-----VEVGSVETYQGREKTIIIASLVKSFT--NM 700
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTL 833
GF+ NP+RVNV L+RA+ L ++GN TL
Sbjct: 701 GFMCNPRRVNVLLSRAKALLILVGNPVTL 729
Score = 70 (29.7 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 246 LSSTL--NEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTV--SMLLFSLLRIKCR 301
L+ST+ N Q+ AV R + G + +GPPGTGKT T+ ++L L + + R
Sbjct: 305 LNSTIYSNAEQLEAV---QRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSR 361
Query: 302 TLACTPTNVAITELASRALRLVKESYK 328
L +N A +A + ++ + +
Sbjct: 362 ILVTAGSNSACDTIALKLCEYIESNIR 388
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 247 (92.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 94/334 (28%), Positives = 162/334 (48%)
Query: 518 RYLLQLHQR--RSECLSVLRNL--W-NSLDELNLPCTTSKQLLKDFCFKRASLFFSTASS 572
R LQ++Q R LS R W + EL L +LKD +T ++
Sbjct: 928 RLWLQMYQADTRRRILSYERQYRTWAERMAELRLQ--EDLHILKD---AEVVGMTTTGAA 982
Query: 573 SYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISD 631
Y+ ++EP ++++EAA++ E+ + L A H +LIGD QL P+ ++
Sbjct: 983 KYRQILQQVEP-RIVIVEEAAEVLEAHTIATLSKA-CQHLILIGDHQQLRPSANVYDLAK 1040
Query: 632 GASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY 691
+ SLFERL +N L+ Q+RM P I+ Y++ L+ K YE+
Sbjct: 1041 NFNLEVSLFERLVKVNIPFVRLNYQHRMRPEIARLLTPHIYQD--LENHPSVLK-YEQ-- 1095
Query: 692 LPGTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLY-KAWVGSKQMVSIGVVS 750
+ G + + +E S +N E V+++ Q L + ++ S+ I +++
Sbjct: 1096 IKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQEYLPSQ----ITILT 1151
Query: 751 PYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNP 810
YT Q+ +RK + K +KV VD +QG E DII++S VR N G +GF+ P
Sbjct: 1152 TYTGQLFCLRKLMPV----KTFAGIKVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQIP 1207
Query: 811 QRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
R+ VAL+RA+ ++ +GN + +++ +W ++
Sbjct: 1208 NRICVALSRAKKGMYCIGNMQ-MLAKVPLWSRII 1240
Score = 51 (23.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 24/68 (35%), Positives = 31/68 (45%)
Query: 278 GPPGTGKT----KTVSMLLF--SLLRIKCRT---LACTPTNVAITELASRALRLVKESYK 328
GPPGTGKT K V LL S+ +I +T L TN A+ + K S
Sbjct: 612 GPPGTGKTYVGLKIVQALLTNKSVWQINTQTFPILVVCYTNHALDQFLEGIYGCQKTSIV 671
Query: 329 R-DSRNNT 335
R R+N+
Sbjct: 672 RVGGRSNS 679
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 246 (91.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 98/333 (29%), Positives = 153/333 (45%)
Query: 552 KQLLKDFCF---KRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAG 608
K+LL D +R + T +++ + K ++IDE A E ++ +PL
Sbjct: 2455 KKLLNDARLHELERHDIILCTCTAAASPNLKKTLSARQILIDECAMATEPQTLVPLVSFK 2514
Query: 609 INHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPN 668
VL+GD QL +V++ RSLFER ++ + +LD QYRMH I FP+
Sbjct: 2515 PEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERY--MDRAI-MLDTQYRMHEEICKFPS 2571
Query: 669 LQFY----------RNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSCR 718
+Y R +L+ A + + K L G G I ++ +S
Sbjct: 2572 EAYYNDMLKTVVRERTSVLN-AETEGRRQSKRILFGDIRGEE--IGLVVSTARGNENSKA 2628
Query: 719 NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVK 778
N EV ++I +L VG + I ++SPY AQV IR+++ S++E K GFTV
Sbjct: 2629 NFDEVKKAVEICIQLVT--VGRVRPEDIAILSPYNAQVAQIRERL-SDFELK-GFTVT-- 2682
Query: 779 SVDGFQGGEEDIIIISTVR-CNT------------GGSIGFISNPQRVNVALTRARHCLW 825
++ QG E +I+S VR C + IGF+ + ++NV +TRA+ L
Sbjct: 2683 TITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKHIGFVGDENQINVGITRAQVGLC 2742
Query: 826 ILGNERTLISSESIWGTLVCDAKARQCFFKADE 858
ILGN+ L S + W L+ C AD+
Sbjct: 2743 ILGNQAVLNCSPA-WQKLLKHYSGHGCVVTADQ 2774
Score = 164 (62.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 91/339 (26%), Positives = 149/339 (43%)
Query: 565 LFFSTASSSYKLHSVKIEPLNF---LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQ 620
+ +T S + LH +K+ P F ++IDEA+Q+ E E+ + L LA + VL GD Q
Sbjct: 660 IIITTTSIARHLHELKL-PKGFFTHILIDEASQMLEGEALMALGLADKHTRVVLAGDHMQ 718
Query: 621 L-P---AMVESKISDGASFGRSLF-----ERLTLLNHSKHLLDIQYRMHPSISLFPNLQF 671
+ P ++ + K S+ R LF + + + S+ + + YR I F + F
Sbjct: 719 MAPKLFSVTDDKRSEHTLLNR-LFHYYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTYF 777
Query: 672 YRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGG---REEFIYHSCRNMVEVSVVIK 728
Y + DG +K++ + H P P F ++ G S N EV+ V+
Sbjct: 778 Y---VSDG--IKARG-DVH--PHPRLKPLIFHHVRGECHLSSTITSTSWLNYAEVNSVVN 829
Query: 729 ILQKLYKAWV---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQG 785
++Q L W G K I V+S QV AIR + K + V V+++ QG
Sbjct: 830 MVQVLLTDWPMEWGDKDPKQICVLSE-GQQVAAIRIHL----RRKGFYGVSVQNLANIQG 884
Query: 786 GEEDIIIISTVRCNT------GGSIGFISNPQRVNVALTRARHCLWILGNERTLI---SS 836
+ +III+TV F + + +N ALTRA+ + ++G+ L
Sbjct: 885 KQFRVIIITTVHTRDKLLQLDSSCPEFFDDIRALNTALTRAQSLVVVIGDAGALCCFGKC 944
Query: 837 ESIWGTLV--CDAKARQCFFKADE-DRN-LAKARLEVSK 871
+W + C +K K D R+ L + LE+SK
Sbjct: 945 SKVWRAYIEHCISKGS---IKPDHFTRDVLQREVLEISK 980
Score = 65 (27.9 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 248 STLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL-RIKCRTLACT 306
S LN Q A+ L + + D + L +GP GTGKT ++ L R + + L CT
Sbjct: 529 SQLNNKQQIALNFILGKCEDDKVAAPLLIYGPFGTGKTLCLASAAKELAHRSQNKVLICT 588
Query: 307 PTN 309
TN
Sbjct: 589 YTN 591
Score = 54 (24.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTL 303
GPPGTGKT + +++ ++ R L
Sbjct: 2311 GPPGTGKTVVGAYIVYWFSQLNSRNL 2336
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 292 LFSLLRIKCRTLACTPTNVAITELASRAL---RLVKESYKRDSRNN 334
LF+ L++ C +P V + AL + K S + RN+
Sbjct: 402 LFANLKVSCSLTPDSPEGVVLKRGVQMALVNCKSTKASMSAEHRNH 447
Score = 39 (18.8 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 23/90 (25%), Positives = 35/90 (38%)
Query: 496 EELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQLL 555
EEL +F+H V + F + + L + S L + N EL +P S L
Sbjct: 1442 EELNIMFNHEVSK-FLSEYTDTKSCTPLRCQDSPNAEALEKISNQHMEL-IPF--SSHLT 1497
Query: 556 KDFCFKRASLFFSTASSSYKLHSVKIEPLN 585
+R L + + Y L S + P N
Sbjct: 1498 FHLERQRMDLNNAVTFTVYSLGSRYVHPNN 1527
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 248 (92.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 93/332 (28%), Positives = 163/332 (49%)
Query: 518 RYLLQLHQR--RSECLSVLRNLWNSLDEL-NLPCTTSKQLLKDFCFKRASLFFSTASSSY 574
R LQL+Q R + LS R S + + L +LKD + +T ++ Y
Sbjct: 935 RLWLQLYQADTRRKILSYERQYRTSAERMAELRLQEDLHILKD---AQVVGMTTTGAAKY 991
Query: 575 KLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDGA 633
+ K+EP ++++EAA++ E+ + L A H +LIGD QL P+ ++
Sbjct: 992 RQILQKVEP-RIVIVEEAAEVLEAHTIATLSKA-CQHLILIGDHQQLRPSANVYDLAKNF 1049
Query: 634 SFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLP 693
+ SLFERL +N L+ Q+RM P I+ Y++ L+ K YEK +
Sbjct: 1050 NLEVSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQD--LENHPSVLK-YEK--IK 1104
Query: 694 GTEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQK-LYKAWVGSKQMVSIGVVSPY 752
G + + +E S +N E V+++ + L + ++ S+ I +++ Y
Sbjct: 1105 GVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQ----ITILTTY 1160
Query: 753 TAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQR 812
T Q+ +RK + + K V+V VD +QG E DII++S VR N G +GF+ R
Sbjct: 1161 TGQLFCLRKLMPA----KTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNR 1216
Query: 813 VNVALTRARHCLWILGNERTLISSESIWGTLV 844
+ VAL+RA+ ++ +GN + +++ +W ++
Sbjct: 1217 ICVALSRAKKGMYCIGNMQ-MLAKVPLWSKII 1247
Score = 48 (22.0 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 278 GPPGTGKTKTVSMLLFSLL 296
GPPGTGKT ++ +LL
Sbjct: 619 GPPGTGKTYVGLKIVQALL 637
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 231 (86.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 81/276 (29%), Positives = 132/276 (47%)
Query: 568 STASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVE 626
+T + Y+ +I P I+EAA + E IP + VLIGD QL P
Sbjct: 690 TTGLNKYRDILERINP-KICFIEEAADVLEGP-IIPAVFPSLEQLVLIGDHKQLRPGCST 747
Query: 627 SKI-SDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSK 685
+ D + S+FERL + L +Q RMHP I + Y + L + +K
Sbjct: 748 YALRQDPFNLSISMFERLVENDMEYTRLTMQRRMHPQIRRLVS-SVYED--LSDYEI-TK 803
Query: 686 SYEKHYLPGT-EFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMV 744
+ +PG E + F+ + + S N+ E ++++ L V +++
Sbjct: 804 YWPS--IPGMGEIRRF-FLTHSRIEDNDGFASKINLFEAQMLVQFAVYLINNGVEPQKIT 860
Query: 745 SIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSI 804
+ Y AQ I + + SE N++ +KV +VDG+QG E D++++S VR N +
Sbjct: 861 CLTF---YAAQKDLIERLL-SESLNREKHFIKVATVDGYQGEENDVVLLSLVRNNDRTEV 916
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
GF+S+P RV V+L+RAR L+I GN + + S +W
Sbjct: 917 GFLSSPHRVCVSLSRARRGLFIFGNAQLVAESNPLW 952
Score = 61 (26.5 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 278 GPPGTGKT----KTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYKRDSRN 333
GPPGTGK+ K + LL + L TN A+ ++ R L + SR
Sbjct: 393 GPPGTGKSFVTLKAIETLLENTHSHVLPILVACQTNHAVDQILIRLLHQGASVMRLGSRT 452
Query: 334 NTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKR 369
P + + +F K + F+ Y + R K+
Sbjct: 453 KDP--EIAAVTIFQKAKHTKHS--FKAAYNEIRHKK 484
Score = 45 (20.9 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 473 DMVALKSLLDSFRSLLFQKNVVSEELEKLFSHS---VDEDFSLAFVGKR--YLLQ----L 523
+++ + D F L EE++K S ++E+ F+ R YL L
Sbjct: 554 ELITPSEITDGFEEELQIDPEKLEEIQKEAEDSGALMEEELRGKFINLRCKYLFSKLTTL 613
Query: 524 HQRRSECLSVLRNLWN 539
H++ + L + N+W+
Sbjct: 614 HEKEIDTLLTIPNIWD 629
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 217 (81.4 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 79/266 (29%), Positives = 131/266 (49%)
Query: 589 IDEAAQLKESEST--IPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT-- 644
+DEAA E+E I L+ + +L GD QL +++S+ ++ G +LFERL
Sbjct: 692 VDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQR 751
Query: 645 ----LLNHSKHLLDIQ------YRMHPSI-SLFPNLQFYRNQILDGA--NVKSKSYEKHY 691
+ + +Q +R HP I SL+ N+ +Y + A + + + Y
Sbjct: 752 KCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNM-YYEGHLRTEAPMEIVCRFHNWFY 810
Query: 692 LPGTEFGPYTFINIIGG--REEFIYHSCRNMVEVSVVIKILQKL-YKAWVGSKQM-VSIG 747
LP F P F ++ G + C N E+ VV+ ++ L Y G K + IG
Sbjct: 811 LPNATF-PIMFHSVFGTTMNTKSSVSLCNNK-EIDVVMDYVKDLMYFGLNGEKLLQTDIG 868
Query: 748 VVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFI 807
++SPY Q I++++ ++ + SV+ FQG E+ +II+S VR T +GF+
Sbjct: 869 IISPYKNQYQRIQEQLNM----RNWSQIDCGSVELFQGKEKHVIIVSFVRSFTP-KLGFL 923
Query: 808 SNPQRVNVALTRARHCLWILGNERTL 833
+N +R+NV L+R L ++GN RTL
Sbjct: 924 NNERRLNVLLSRPISLLILIGNPRTL 949
Score = 86 (35.3 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 277 WGPPGTGKTKTVSMLLFSLL--RIKCRTLACTPTNVAITELASRALRLVKESYKRDSRNN 334
+GPPGTGKT T+ ++ L R + L +N A E+A R LR + ++ + R
Sbjct: 564 FGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPRPL 623
Query: 335 TPF----CP-----LGDILL-FGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSG 379
T C + D+LL + N + P + ++ YR+ + C L+G
Sbjct: 624 TRIFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVH-QYRI---VICTLSLAG 674
Score = 37 (18.1 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 127 LADFKPEKVSDLLRVGRMWTFVSVTMVP 154
L DF+ EK + L R+ S T VP
Sbjct: 67 LMDFRKEKFNLLDEQHRLRGIASTTDVP 94
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 182 (69.1 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 66/199 (33%), Positives = 94/199 (47%)
Query: 657 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKHYLPGTEFGPYTFINIIGGR-EE 711
YR H ++ P+ FY ++ D V S +EK LP F P F + G E
Sbjct: 975 YRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEK--LPRKGF-PLIFHGVRGNEARE 1031
Query: 712 FIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD 771
S N E V++ L ++ IGV++PY QV +KI N D
Sbjct: 1032 GRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQV----EKIKILLRNVD 1087
Query: 772 GFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS------IGFISNPQRVNVALTRARHCLW 825
+KV SV+ FQG E ++IISTVR N +GF+SN +R NVA+TR + L
Sbjct: 1088 LMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 1147
Query: 826 ILGNERTLISSESIWGTLV 844
+LGN L+ + +G L+
Sbjct: 1148 VLGNPHVLVR-DPCFGALL 1165
Score = 90 (36.7 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 548 CTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLA 607
C + + K F+ S+A Y++ +++ + +DEA Q E E IPL L
Sbjct: 848 CRDGEDVWKASRFRVLITTCSSAGLFYQI-GLRVGHFTHVFVDEAGQASEPECLIPLGLV 906
Query: 608 G--INHAVLIGDECQLPAMVESKISDGASFGRSLFERL 643
VL GD QL +++S+++ S+ ERL
Sbjct: 907 SDVSGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERL 944
Score = 77 (32.2 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 32/89 (35%), Positives = 41/89 (46%)
Query: 240 EKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI- 298
EKF + LNE Q AV L DC + + +GPPGTGKT T+ + +
Sbjct: 741 EKF---FNPMLNENQKLAVRRILSG-DC--RPIPYVLFGPPGTGKTVTIIEAILQVFHAL 794
Query: 299 -KCRTLACTPTNVAITELA-----SRALR 321
R L C P+N A + SRALR
Sbjct: 795 PDSRILVCAPSNSAADLVCLRLHESRALR 823
Score = 41 (19.5 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 340 LGDILLFGNKD-RLKVNPGFEEIY 362
+G ++ +D LK+NP FE+ Y
Sbjct: 604 IGYVVEIHEEDVTLKLNPEFEQAY 627
Score = 39 (18.8 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 315 LASRALRLVKESYKRDSRNNTP-FCP 339
LAS +V + KR+SR P F P
Sbjct: 474 LASTKTTVVVTTQKRNSRRQLPSFLP 499
Score = 37 (18.1 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 32 NQSLFKDQVEKIPESFQSVKQ 52
N+ KDQ + PE Q+ Q
Sbjct: 695 NRRAVKDQTKHAPEEHQAGAQ 715
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 199 (75.1 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 85/267 (31%), Positives = 121/267 (45%)
Query: 613 VLIGDECQLPAMVESKISDGASFGRSLFERL---TLLNHSKH----LLDIQ----YRMHP 661
VL GD QL +V+S+++ G SL ERL +L + LL + YR H
Sbjct: 839 VLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRSHE 898
Query: 662 SISLFPNLQFYRNQILDGANVKSKSYEKHY--LPGTEFGPYTFINIIGGR-EEFIYHSCR 718
++ P+ FY ++ A + H+ LP F P F + G E S
Sbjct: 899 ALLDLPSRLFYAGELCVRAQRAAVDSLCHWNKLPTRGF-PLIFHGVRGSEMREGCNPSWF 957
Query: 719 NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGF-TVKV 777
N E V+ +L K IGV++PY QV IR + + G VKV
Sbjct: 958 NPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLGEVKV 1012
Query: 778 KSVDGFQGGEEDIIIISTVRCNTG-------GSIGFISNPQRVNVALTRARHCLWILGNE 830
SV+ FQG E I+I+STVR N +GF+SNP+R NVA+TRA+ L ++GN
Sbjct: 1013 GSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLIVIGNP 1072
Query: 831 RTLISSESIWGTLVCDAKARQCFFKAD 857
LI E + L+ + + F D
Sbjct: 1073 HVLIK-EPCFSALLQYSYDNRAFIGCD 1098
Score = 174 (66.3 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 79/251 (31%), Positives = 112/251 (44%)
Query: 568 STASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAG--INHAVLIGDECQLPA 623
ST SS+ + + + +F + +DEA Q E E+ IPL L VL GD QL
Sbjct: 790 STCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQLGP 849
Query: 624 MVESKISDGASFGRSLFERL---TLLNHSKH----LLDIQ----YRMHPSISLFPNLQFY 672
+V+S+++ G SL ERL +L + LL + YR H ++ P+ FY
Sbjct: 850 VVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRSHEALLDLPSRLFY 909
Query: 673 RNQILDGANVKSKSYEKHY--LPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKI 729
++ A + H+ LP F P F + G E S N E V+
Sbjct: 910 AGELCVRAQRAAVDSLCHWNKLPTRGF-PLIFHGVRGSEMREGCNPSWFNPAEAVQVMMY 968
Query: 730 LQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGF-TVKVKSVDGFQGGEE 788
+L K IGV++PY QV IR + + G VKV SV+ FQG E
Sbjct: 969 CCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLGEVKVGSVEEFQGQEF 1023
Query: 789 DIIIISTVRCN 799
I+I+STVR N
Sbjct: 1024 LIMILSTVRSN 1034
Score = 89 (36.4 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 29/78 (37%), Positives = 38/78 (48%)
Query: 243 GPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKT-VSMLLFSLLRIKC- 300
G + LN Q AV R L + + + +GPPGTGKT T + +L RI C
Sbjct: 666 GQFFNPDLNAAQKQAV---RRILSGESRPTPYVLFGPPGTGKTITLIEAILQVHHRISCS 722
Query: 301 RTLACTPTNVAITELASR 318
R L CTP+N A + R
Sbjct: 723 RVLVCTPSNSAADLICMR 740
Score = 51 (23.0 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 930 SNPKEVKFNLQEAAEIFAAIGMPDSAVR--CFNDLEKYERAGR 970
SNPK + A + IG P ++ CF+ L +Y R
Sbjct: 1050 SNPKRFNVAITRAKALLIVIGNPHVLIKEPCFSALLQYSYDNR 1092
Score = 48 (22.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 25/104 (24%), Positives = 38/104 (36%)
Query: 345 LFGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK 404
+F N D L V PGF D ++E L WR + + C Q +
Sbjct: 203 VFFNLDSLIVPPGFRPTRGDLVNLVVLESSQSLYSWRALCMTPLQRSAQCSEQKEPDADL 262
Query: 405 ---LKEREDCNENQSEEKKCRKETEGSKGECKPFLEYVRESFNC 445
L+E+ +Q + C G+C L +V+ NC
Sbjct: 263 QALLQEKGGLQVSQQNQSVCLL-----MGDCSELLIWVQ---NC 298
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 223 (83.6 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 65/175 (37%), Positives = 99/175 (56%)
Query: 702 FINIIGGREEFIYH--SCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ---V 756
F + G+EE S N E + V KI KL KA G+K IG+++PY Q +
Sbjct: 20 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYL 76
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVA 816
V + GS + K V++ SVD FQG E+D II+S VR N IGF+++P+R+NVA
Sbjct: 77 VQYMQFSGSLH-TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 135
Query: 817 LTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEVSK 871
LTRAR+ + I+GN + L S + +W L+ K ++ + + NL ++ ++ SK
Sbjct: 136 LTRARYGVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSK 188
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 175 (66.7 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 59/176 (33%), Positives = 87/176 (49%)
Query: 702 FINIIG-GREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIR 760
F IIG R+ S N EV V + LY+A V + Q IG+++PY QV +R
Sbjct: 1089 FYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQ---IGIITPYQKQVKMLR 1145
Query: 761 KKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCN-------TGGSIGFISNPQRV 813
S + D K+ SV+ FQG E DII+ISTVR + S+GF+ +R+
Sbjct: 1146 ----SMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRL 1201
Query: 814 NVALTRARHCLWILGNERTLISSESIWGTLVCDAKARQCFFKADEDRNLAKARLEV 869
NVA++RAR + I GN L++ + W L+ +F D + + + EV
Sbjct: 1202 NVAVSRARAMMIIFGNPH-LLAVDECWRQLILFCVKNNAYFGCDLPQMVINQKDEV 1256
Score = 88 (36.0 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHA--VLIGDECQLPAMVESKISDGASFGRSLFERLT 644
++ DEA Q E E+ +P+ + + VL GD QL ++V S+I+ F S ERL
Sbjct: 945 VLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERL- 1003
Query: 645 LLNHSKHLLDIQ 656
L S + D+Q
Sbjct: 1004 -LERSPYRKDLQ 1014
Score = 77 (32.2 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 237 IWDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLL 296
++D K + +LN Q AVF LR + ++ + +GPPG+GKT T+ L L+
Sbjct: 772 LYDSKL-EWYNQSLNSIQKRAVFNILRG---EAENIPYVLFGPPGSGKTMTLIETLLQLV 827
Query: 297 RIK--CRTLACTPTNVAITELASRAL 320
R R L TP+N + +L ++ L
Sbjct: 828 RNLPGARILVGTPSNSS-ADLVTKRL 852
Score = 40 (19.1 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 498 LEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRN 536
+E+ +S + E S+ R+ L LH EC RN
Sbjct: 600 IEQHYSF-LTEPLSIKTYMHRFRLLLHLEEIECFVNFRN 637
Score = 40 (19.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 23 FSWS-LENIFNQSLFKDQVEKIPES 46
FS S LE + +S ++ +++ PES
Sbjct: 995 FSISFLERLLERSPYRKDLQRFPES 1019
Score = 38 (18.4 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 2 MEGKGCSSSTKKAVGFTGHTVF-SWSLEN-IFNQSLFK 37
+E K SS ++ V F HT F ++E + N L K
Sbjct: 466 LESKEISSGSEITVTFEIHTQFLGEAIEKYVLNFDLLK 503
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 157 (60.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 42/133 (31%), Positives = 74/133 (55%)
Query: 699 PYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F+N + E+ N++E +V+ + KA G K IG+++PY Q+
Sbjct: 891 PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 947
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNV 815
I + ++ G V+V +VD +QG ++ I+++S VR N G++G + + +R+NV
Sbjct: 948 KVISDLLA---QSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNV 1003
Query: 816 ALTRARHCLWILG 828
A+TRA+H L +LG
Sbjct: 1004 AITRAKHKLILLG 1016
Score = 113 (44.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 757 DFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 814
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
++ L +QYRM+ I N Y ++ G++
Sbjct: 815 QNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 851
Score = 54 (24.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 626 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYACGFSVLLTSYTH 679
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 680 SAVDNIL---LKLAK 691
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 157 (60.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 42/133 (31%), Positives = 74/133 (55%)
Query: 699 PYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F+N + E+ N++E +V+ + KA G K IG+++PY Q+
Sbjct: 967 PVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 1023
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNV 815
I + ++ G V+V +VD +QG ++ I+++S VR N G++G + + +R+NV
Sbjct: 1024 KVISDLLA---QSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNV 1079
Query: 816 ALTRARHCLWILG 828
A+TRA+H L +LG
Sbjct: 1080 AITRAKHKLILLG 1092
Score = 113 (44.8 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 833 DFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 890
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
++ L +QYRM+ I N Y ++ G++
Sbjct: 891 QNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 927
Score = 54 (24.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 702 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYACGFSVLLTSYTH 755
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 756 SAVDNIL---LKLAK 767
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 210 (79.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 87/294 (29%), Positives = 132/294 (44%)
Query: 561 KRASLFFSTASSSYKLHSVKIEPLNF----LVIDEAAQLKESESTIPLQLAGINHA---- 612
K A + T++ + + +I L F +V++EAAQ+ E ES IP L +
Sbjct: 1034 KEARIIAMTSTHA-AMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTALQNMKEGQLPL 1092
Query: 613 ---VLIGDECQLPAMVES-KISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPN 668
VL GD Q ++++ A F +SLF RL L LD Q R PSI+
Sbjct: 1093 KRIVLCGDHLQNSPIIQNLAFRQYAHFEQSLFLRLIRLGVPAITLDQQGRARPSIA---E 1149
Query: 669 LQFYRNQILDGANVKSKSYE-KHYLPGTEFGPYTFINIIG----GREEFIYHSCRNMVEV 723
L +R Q L + ++ E K G +F Y FIN+ G E H +N+ E
Sbjct: 1150 LFRWRYQNLGNLPIVEQAPEFKQANAGFQF-EYQFINVPDYQGTGEREPTPHFVQNLGEA 1208
Query: 724 SVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVK--VKSVD 781
+ I Q Y +G I +++ Y Q I+ + F + V +VD
Sbjct: 1209 EYAVAIFQ--YMRLLGYPAS-KISILATYAGQTALIKDVLNHRCSKNTLFGMPKIVTTVD 1265
Query: 782 GFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLIS 835
+QG + D II+S R T +G++ + +R+ VAL+RAR L+ILG S
Sbjct: 1266 RYQGEQNDYIILSLTRTRT---VGYLRDVRRLTVALSRARLGLYILGRREVFES 1316
Score = 65 (27.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 250 LNEPQVGAV-F--ACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLA 304
++ P++ AV F A ++ + + G+ + GPPGTGKT + ++ ++ RTL
Sbjct: 798 VDAPRLNAVRFTPAQIQAIASGTQPGLTVIVGPPGTGKTDVATQIINNIYHNFPTERTLL 857
Query: 305 CTPTNVAITELASRALRL 322
+N A+ +L + + L
Sbjct: 858 VAHSNQALNQLFQKIVAL 875
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 207 (77.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 78/281 (27%), Positives = 132/281 (46%)
Query: 573 SYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDG 632
++ + S KI +F ++DEA+Q+ + PL + VL+GD QLP +V ++ +
Sbjct: 69 NHPIFSRKI--FDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARA 124
Query: 633 ASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDG----AN------- 681
SLF+RL + L +QYRM+ I N Y ++ G AN
Sbjct: 125 LGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRH 184
Query: 682 ---VKSK-----SYEKH-YLPGT--EFGPYTFINI--IGGREEFIYHSCRNMVEVSVVIK 728
VK + Y + +L G P F+N + E+ N+ E +++
Sbjct: 185 FKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVF 244
Query: 729 ILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEE 788
+ KA IG+++PY Q+ I + G V+V +VD +QG ++
Sbjct: 245 LTSIFVKAGCSPSD---IGIIAPYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDK 296
Query: 789 DIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWILG 828
I+++S VR N G++G + + +R+NVA+TRA+H L +LG
Sbjct: 297 SIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLG 337
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 148 (57.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 42/133 (31%), Positives = 71/133 (53%)
Query: 699 PYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F+N + E+ N+ E +++ + KA G K IG+++PY Q+
Sbjct: 470 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 526
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNV 815
I + + + V+V +VD +QG ++ II++S VR N G IG + + +R+NV
Sbjct: 527 KIINDLL---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 582
Query: 816 ALTRARHCLWILG 828
A+TRA+H L +LG
Sbjct: 583 AITRAKHKLILLG 595
Score = 110 (43.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 336 DFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 393
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
++ L +QYRM+ I N Y ++ G++
Sbjct: 394 QNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 430
Score = 54 (24.1 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 205 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYTCGFSVLLTSYTH 258
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 259 SAVDNIL---LKLAK 270
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 216 (81.1 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 75/272 (27%), Positives = 129/272 (47%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 757 DFCIVDEASQISQPICLGPLFFS--RRFVLVGDHKQLPPLVLNREARALGMSESLFKRLE 814
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA-----------NVKSKSYEKH--- 690
+ L IQYRM+ I N Y ++ G+ N+K E +
Sbjct: 815 RNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFYADY 874
Query: 691 ----YLPGT--EFGPYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQ 742
+L G P F+N + E+ N+ E +++ + KA
Sbjct: 875 SDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCSPSD 934
Query: 743 MVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGG 802
IG+++PY Q+ I + + G V+V +VD +QG ++ +I++S VR N G
Sbjct: 935 ---IGIIAPYRQQLRTITDLLA---RSSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDG 987
Query: 803 SIG-FISNPQRVNVALTRARHCLWILGNERTL 833
++G + + +R+NVA+TRA+H L +LG+ +L
Sbjct: 988 TLGELLKDWRRLNVAITRAKHKLILLGSVSSL 1019
Score = 53 (23.7 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 626 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICALVRILSACGFSVLLTSYTH 679
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 680 SAVDNIL---LKLAK 691
Score = 47 (21.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 466 ISENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKLFSH-SVDEDFSLAFVGKRYLL-QL 523
+ E+S + V +L F + V+S ++ + +V+ + +++LL +
Sbjct: 12 LEEDSGAEAVPRMEILQKKADAFFAETVLSRGVDNRYLVLAVETKLNERGAEEKHLLITV 71
Query: 524 HQR-RSECLSVLRNLWNSL 541
Q E L +LRN W+S+
Sbjct: 72 SQEGEQEVLCILRNGWSSV 90
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 155 (59.6 bits), Expect = 6.0e-13, Sum P(4) = 6.0e-13
Identities = 43/117 (36%), Positives = 69/117 (58%)
Query: 719 NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGF-TVKV 777
N E +V ++ L KA G + IGV++PY Q+ K+ S D F ++V
Sbjct: 1231 NHTEAVLVQGLVTLLLKA--GCRAC-DIGVIAPYRQQL-----KVISSLLQGDAFKALEV 1282
Query: 778 KSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWILGNERTL 833
+VD +QG ++ +II+S VR N G++G + + +R+NVA+TRA+H L +LG+ TL
Sbjct: 1283 NTVDKYQGRDKSVIIVSFVRSNAEGNLGELLQDWRRLNVAITRAKHKLLMLGSAPTL 1339
Score = 117 (46.2 bits), Expect = 6.0e-13, Sum P(4) = 6.0e-13
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL A VL+GD QLP +V++ + SLF+RL
Sbjct: 1074 DFCIVDEASQISQPVCIGPLFYA--QRFVLVGDHQQLPPIVQNAEARSLGMDESLFKRLE 1131
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
+ L++QYRM+ +I N Y ++ G+
Sbjct: 1132 HHRDAVVQLNVQYRMNSAIMSLSNALMYEGRLECGS 1167
Score = 54 (24.1 bits), Expect = 6.0e-13, Sum P(4) = 6.0e-13
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 944 LNKPQKQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILHACGFSVLLTSYTH 997
Query: 310 VAITELASRALRLVKESYKRDSR 332
A+ + + L+ K + R R
Sbjct: 998 SAVDNILLK-LKRFKIGFLRLGR 1019
Score = 42 (19.8 bits), Expect = 6.0e-13, Sum P(4) = 6.0e-13
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 30 IFNQSLFKDQVEKIPESFQSVKQ 52
I+N+++ +D VEK E+ Q+ Q
Sbjct: 723 IYNRAVERDPVEKCSENPQAFVQ 745
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 35/164 (21%), Positives = 59/164 (35%)
Query: 589 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDGASFGRSLF-ERLTLL 646
++E QL E + G+ H + + E S+IS G + +R L+
Sbjct: 1043 LEELEQLYSRELIVATTCMGVKHPIFSRRRFDFCIVDEASQISQPVCIGPLFYAQRFVLV 1102
Query: 647 NHSKHLLDI-QYRMHPSI----SLFPNLQFYRNQILD-------GANVKSKSYEKHYLPG 694
+ L I Q S+ SLF L+ +R+ ++ + + S S Y
Sbjct: 1103 GDHQQLPPIVQNAEARSLGMDESLFKRLEHHRDAVVQLNVQYRMNSAIMSLSNALMYEGR 1162
Query: 695 TEFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
E G N + + R E + + + Q Y AWV
Sbjct: 1163 LECGSEKTANAV------LQLPSRAQAEEELELYVCQPQYSAWV 1200
Score = 37 (18.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 491 KNVVSEELEKLFSHSVDEDF---SLAFVGKR 518
+N SE L+K FS S ++ S++ G R
Sbjct: 174 QNKYSETLQKAFSKSPEKKIKTESVSLEGSR 204
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 180 (68.4 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 61/159 (38%), Positives = 85/159 (53%)
Query: 699 PYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSK--QMVS---IGVVSPY 752
P F + G E E S N E+ VV++ LQKL ++ G + +S IG++SPY
Sbjct: 540 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQ-GRRGCPTISPKEIGIISPY 598
Query: 753 TAQVVAIRKKIGSE----YENKDGFTVKVKSVDGFQGGEEDIIIISTVR-CNT------G 801
QV IR I S+ D +KV SV+ FQG E +I+ISTVR C+
Sbjct: 599 RKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQT 658
Query: 802 GSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
+GF+ NP+R+NVALTRA+ L ++GN L S + W
Sbjct: 659 FRLGFLKNPKRLNVALTRAKALLIVVGNAAVL-SKDPHW 696
Score = 99 (39.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 60/217 (27%), Positives = 93/217 (42%)
Query: 551 SKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAG 608
SK+LLK + + +T ++ +L S P F + IDE E ES + + AG
Sbjct: 370 SKKLLKPY-----RILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAI--AG 422
Query: 609 I------------NHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLN--HSKH--- 651
+ VL GD QL ++ S ++ G SL ERL L N ++K
Sbjct: 423 LLTTMDPDTNRNGGQLVLAGDPQQLGPVLRSPLAAQHGLGTSLLERLMLHNALYAKSDEG 482
Query: 652 -------LLDIQYRMHPSISLFPNLQFYRNQI--LDGANVKSKSYEKHY--LPGTEFGPY 700
L YR H +I PN FY +++ +G+ +++ + LP P
Sbjct: 483 YNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGV-PI 541
Query: 701 TFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKA 736
F + G E E S N E+ VV++ LQKL ++
Sbjct: 542 IFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQS 578
Score = 83 (34.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 36/114 (31%), Positives = 51/114 (44%)
Query: 218 GTDSVVEESCELCSLQRKGIWDEK-FGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELR 276
G DSV+ S GI+ + F + + NE Q AV + + + L
Sbjct: 228 GLDSVLFPSASCQRSLFTGIFQPRWFDRKVEA--NEEQCQAVKHIVTGMS---RPAPYLI 282
Query: 277 WGPPGTGKTKT-VSML--LFSLLRIKCRTLACTPTNVAITELASRALRLVKESY 327
+GPPGTGKT T V + ++S + R LAC P+N A L R L + Y
Sbjct: 283 FGPPGTGKTVTLVEAIKQVWSCFK-DARILACAPSNSAADLLCQRLLTNIAPRY 335
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 153 (58.9 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 699 PYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F+N + E+ N+ E +++ + KA IGV++PY Q+
Sbjct: 892 PVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCSPSD---IGVIAPYRQQL 948
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNV 815
I + + G V+V +VD +QG ++ +I++S VR N G++G + + +R+NV
Sbjct: 949 RIISDLLA---RSSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNV 1004
Query: 816 ALTRARHCLWILGNERTLISSESIWGTLVCDAKARQ 851
ALTRA+H L +LG+ +L + GTL A Q
Sbjct: 1005 ALTRAKHKLILLGSVSSLKRFPPL-GTLFDHLNAEQ 1039
Score = 110 (43.8 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 758 DFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVVNREARALGMSESLFKRLE 815
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
+ L +QYRM+ I N Y ++ G++
Sbjct: 816 RNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSD 852
Score = 53 (23.7 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 627 LNKPQRQAMKRVL--LSKDYTLIV----GMPGTGKTTTICALVRILSACGFSVLLTSYTH 680
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 681 SAVDNIL---LKLAK 692
Score = 45 (20.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 22/102 (21%), Positives = 44/102 (43%)
Query: 466 ISENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKLF---SHSVDEDFSLAFVGKRYLLQ 522
+ E+ + V LL LF + V+S ++ + + ++ A + ++
Sbjct: 12 LEEDGGAEAVPRVELLRKKADALFPETVLSRGVDNRYLVLAVETSQNERGAEEKRLHVTA 71
Query: 523 LHQRRSECLSVLRNLWNSL-----DELNLP--CTTSKQLLKD 557
R E L +LRN W+S+ D ++L CT+ ++ D
Sbjct: 72 SQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWIIDD 113
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 657 YRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 695
+++HP I F + R++ + + Y H + T
Sbjct: 704 HKVHPDIQKFTEEEICRSRSIASLAHLEELYNSHPIVAT 742
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 180 (68.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 61/159 (38%), Positives = 85/159 (53%)
Query: 699 PYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSK--QMVS---IGVVSPY 752
P F + G E E S N E+ VV++ LQKL ++ G + +S IG++SPY
Sbjct: 772 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQ-GRRGCPTISPKEIGIISPY 830
Query: 753 TAQVVAIRKKIGSE----YENKDGFTVKVKSVDGFQGGEEDIIIISTVR-CNT------G 801
QV IR I S+ D +KV SV+ FQG E +I+ISTVR C+
Sbjct: 831 RKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQT 890
Query: 802 GSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
+GF+ NP+R+NVALTRA+ L ++GN L S + W
Sbjct: 891 FRLGFLKNPKRLNVALTRAKALLIVVGNAAVL-SKDPHW 928
Score = 96 (38.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 60/217 (27%), Positives = 92/217 (42%)
Query: 551 SKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAG 608
SK+LLK + + +T ++ +L S P F + IDE E ES + + AG
Sbjct: 602 SKKLLKPY-----RILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAI--AG 654
Query: 609 I------------NHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLLN--HSKH--- 651
+ VL GD QL + S ++ G SL ERL L N ++K
Sbjct: 655 LLTTMDPDTNPNGGQLVLAGDPQQLGPVPRSPLAAQHGLGTSLLERLMLHNALYAKSDEG 714
Query: 652 -------LLDIQYRMHPSISLFPNLQFYRNQI--LDGANVKSKSYEKHY--LPGTEFGPY 700
L YR H +I PN FY +++ +G+ +++ + LP P
Sbjct: 715 YNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGV-PI 773
Query: 701 TFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKA 736
F + G E E S N E+ VV++ LQKL ++
Sbjct: 774 IFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQS 810
Score = 83 (34.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 36/114 (31%), Positives = 51/114 (44%)
Query: 218 GTDSVVEESCELCSLQRKGIWDEK-FGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELR 276
G DSV+ S GI+ + F + + NE Q AV + + + L
Sbjct: 460 GLDSVLFPSASCQRSLFTGIFQPRWFDRKVEA--NEEQCQAVKHIVTGMS---RPAPYLI 514
Query: 277 WGPPGTGKTKT-VSML--LFSLLRIKCRTLACTPTNVAITELASRALRLVKESY 327
+GPPGTGKT T V + ++S + R LAC P+N A L R L + Y
Sbjct: 515 FGPPGTGKTVTLVEAIKQVWSCFK-DARILACAPSNSAADLLCQRLLTNIAPRY 567
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 148 (57.2 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 42/133 (31%), Positives = 71/133 (53%)
Query: 699 PYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F+N + E+ N+ E +++ + KA G K IG+++PY Q+
Sbjct: 859 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 915
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNV 815
I + + + V+V +VD +QG ++ II++S VR N G IG + + +R+NV
Sbjct: 916 KIINDLL---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 971
Query: 816 ALTRARHCLWILG 828
A+TRA+H L +LG
Sbjct: 972 AITRAKHKLILLG 984
Score = 110 (43.8 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 725 DFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 782
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
++ L +QYRM+ I N Y ++ G++
Sbjct: 783 QNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 819
Score = 54 (24.1 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 594 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYTCGFSVLLTSYTH 647
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 648 SAVDNIL---LKLAK 659
Score = 41 (19.5 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 466 ISENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKLFSHS 505
+ E +FQ + ++ L + +R L Q+ V E E L S S
Sbjct: 152 LQEFAFQTVQEIRHLKEMYRLNLNQEEVKQEVEEYLPSFS 191
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 148 (57.2 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 42/133 (31%), Positives = 71/133 (53%)
Query: 699 PYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F+N + E+ N+ E +++ + KA G K IG+++PY Q+
Sbjct: 890 PVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQL 946
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNV 815
I + + + V+V +VD +QG ++ II++S VR N G IG + + +R+NV
Sbjct: 947 KIINDLL---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNV 1002
Query: 816 ALTRARHCLWILG 828
A+TRA+H L +LG
Sbjct: 1003 AITRAKHKLILLG 1015
Score = 110 (43.8 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 756 DFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 813
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
++ L +QYRM+ I N Y ++ G++
Sbjct: 814 QNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 850
Score = 54 (24.1 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 625 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYTCGFSVLLTSYTH 678
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 679 SAVDNIL---LKLAK 690
Score = 41 (19.5 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 466 ISENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKLFSHS 505
+ E +FQ + ++ L + +R L Q+ V E E L S S
Sbjct: 178 LQEFAFQTVQEIRHLKEMYRLNLNQEEVKQEVEEYLPSFS 217
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 207 (77.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 78/281 (27%), Positives = 132/281 (46%)
Query: 573 SYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDG 632
++ + S KI +F ++DEA+Q+ + PL + VL+GD QLP +V ++ +
Sbjct: 747 NHPIFSRKI--FDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARA 802
Query: 633 ASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDG----AN------- 681
SLF+RL + L +QYRM+ I N Y ++ G AN
Sbjct: 803 LGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRH 862
Query: 682 ---VKSK-----SYEKH-YLPGT--EFGPYTFINI--IGGREEFIYHSCRNMVEVSVVIK 728
VK + Y + +L G P F+N + E+ N+ E +++
Sbjct: 863 FKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVF 922
Query: 729 ILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEE 788
+ KA IG+++PY Q+ I + G V+V +VD +QG ++
Sbjct: 923 LTSIFVKAGCSPSD---IGIIAPYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDK 974
Query: 789 DIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWILG 828
I+++S VR N G++G + + +R+NVA+TRA+H L +LG
Sbjct: 975 SIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLG 1015
Score = 54 (24.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 626 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYACGFSVLLTSYTH 679
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 680 SAVDNIL---LKLAK 691
Score = 45 (20.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 417 EEKKCRKETEGSKGECKPFLEYVRESFNCAVIPL 450
EEK C+ ++ G C + V + +C+ +P+
Sbjct: 389 EEKTCKYCSQ--IGNCALYSRAVEQQMDCSSVPI 420
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 156 (60.0 bits), Expect = 2.7e-12, Sum P(4) = 2.7e-12
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 775 VKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLI 834
+K+ ++D +QG E DI+I + R N G IGF+S PQR+NV L+RAR L ++GN T
Sbjct: 960 IKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSNTFT 1019
Query: 835 SS---ESIW 840
+S + +W
Sbjct: 1020 NSRKGKEVW 1028
Score = 127 (49.8 bits), Expect = 2.7e-12, Sum P(4) = 2.7e-12
Identities = 48/187 (25%), Positives = 91/187 (48%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVES---KISDGASF--GRSLFE 641
++++EA ++ ES L + ++IGD QL + + + G+ + RSLFE
Sbjct: 745 VLLEEAGEILESHVLTALG-SHTKQLIMIGDHQQLRPKINNYALSVEKGSGYDLNRSLFE 803
Query: 642 RLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEF---- 697
RL + L Q+RM P IS Y + +LDG K++ + F
Sbjct: 804 RLVESGYPHSTLAKQHRMAPEISALVRRLTYPD-LLDGDKTKTRLAPRGLQNRVVFIDHS 862
Query: 698 GPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F++ + R+ + S +N EV +V+KI++ L + G+ ++V +++PY Q+
Sbjct: 863 QPEGFLHGVSDRDGDGGKGSKQNTFEVKLVLKIVKYLGQQGYGTDKLV---ILTPYLGQL 919
Query: 757 VAIRKKI 763
+R+++
Sbjct: 920 HLLREEL 926
Score = 51 (23.0 bits), Expect = 2.7e-12, Sum P(4) = 2.7e-12
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 273 VELRWGPPGTGKTKTVSMLLFSLLRIKCRT-LACTPTNVAITE 314
V L GPPGTGK+ +++ +L + T L TN A+ +
Sbjct: 478 VSLIQGPPGTGKSFVGALIAKALYKHSKETILVMCYTNHALDQ 520
Score = 37 (18.1 bits), Expect = 2.7e-12, Sum P(4) = 2.7e-12
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 344 LLFGNKDRLKVNPGFEEIYLDYRVKRLMECFAP 376
+ F K+N + YL++ +E F P
Sbjct: 585 MAFSAYSSFKLNYDTLQEYLEFEEPEFLEAFVP 617
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 207 (77.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 78/281 (27%), Positives = 132/281 (46%)
Query: 573 SYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDG 632
++ + S KI +F ++DEA+Q+ + PL + VL+GD QLP +V ++ +
Sbjct: 833 NHPIFSRKI--FDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARA 888
Query: 633 ASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDG----AN------- 681
SLF+RL + L +QYRM+ I N Y ++ G AN
Sbjct: 889 LGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRH 948
Query: 682 ---VKSK-----SYEKH-YLPGT--EFGPYTFINI--IGGREEFIYHSCRNMVEVSVVIK 728
VK + Y + +L G P F+N + E+ N+ E +++
Sbjct: 949 FKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVF 1008
Query: 729 ILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEE 788
+ KA IG+++PY Q+ I + G V+V +VD +QG ++
Sbjct: 1009 LTSIFVKAGCSPSD---IGIIAPYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDK 1060
Query: 789 DIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWILG 828
I+++S VR N G++G + + +R+NVA+TRA+H L +LG
Sbjct: 1061 SIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLG 1101
Score = 54 (24.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 712 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYACGFSVLLTSYTH 765
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 766 SAVDNIL---LKLAK 777
Score = 45 (20.9 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 417 EEKKCRKETEGSKGECKPFLEYVRESFNCAVIPL 450
EEK C+ ++ G C + V + +C+ +P+
Sbjct: 475 EEKTCKYCSQ--IGNCALYSRAVEQQMDCSSVPI 506
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 183 (69.5 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 832 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 887
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 888 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 940
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 941 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 996
Query: 796 VR 797
VR
Sbjct: 997 VR 998
Score = 69 (29.3 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L + + GP GTGKT T++ + +L+
Sbjct: 634 WDEQLDPRL----NAKQKEAVLAITTPLAIQLPPVLII--GPYGTGKTFTLAQAVKHILQ 687
Query: 298 IK--CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 688 QQETSRILICTHSNSA 703
Score = 58 (25.5 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1057
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 171 (65.3 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 58/165 (35%), Positives = 84/165 (50%)
Query: 692 LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVGSKQMV--SI 746
LP F P F ++G E E S N E + V L++L + G ++ S+
Sbjct: 769 LPRQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSV 827
Query: 747 GVVSPYTAQVVAIRK---KIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG 802
GV+SPY QV IR K+ E D +KV SV+ FQG E +I+ISTVR +
Sbjct: 828 GVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 887
Query: 803 -------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
++GF+ NP+R NVA+TRA+ L ++GN L+ + W
Sbjct: 888 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 931
Score = 164 (62.8 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 74/244 (30%), Positives = 112/244 (45%)
Query: 577 HSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFG 636
HS+ EP + + I ++KE+++ P G VL GD QL ++ ++ G
Sbjct: 649 HSM--EPESLVAIAGLLEVKEADN--P---GG--QLVLAGDPRQLGPVLRCPLTQKHGLG 699
Query: 637 RSLFERLTLLN----------HSKHLLDI--QYRMHPSISLFPNLQFYRNQILDGANVKS 684
SL ERL N + + + + YR HP+I PN +Y ++ A+V
Sbjct: 700 YSLLERLLTYNALYKKGPDGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVD 759
Query: 685 KSYEKHY--LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVG 739
+ + LP F P F ++G E E S N E + V L++L + G
Sbjct: 760 RERFCRWEGLPRQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKG 818
Query: 740 SKQMV--SIGVVSPYTAQVVAIRK---KIGSEYENKDGFT-VKVKSVDGFQGGEEDIIII 793
++ S+GV+SPY QV IR K+ E D +KV SV+ FQG E +I+I
Sbjct: 819 KARLSPRSVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILI 878
Query: 794 STVR 797
STVR
Sbjct: 879 STVR 882
Score = 74 (31.1 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
+GPPGTGKT T+ + +++ K LAC P+N L R LR+
Sbjct: 523 FGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQR-LRV 569
Score = 63 (27.2 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 565 LFFSTASSSYKLHSVK--IEPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 614
+ +T ++ +L S + I+ + IDEA E ES + + L + A VL
Sbjct: 618 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLLEVKEADNPGGQLVL 677
Query: 615 IGDECQLPAMVESKISDGASFGRSLFERLTLLN 647
GD QL ++ ++ G SL ERL N
Sbjct: 678 AGDPRQLGPVLRCPLTQKHGLGYSLLERLLTYN 710
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 183 (69.5 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 831
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 832 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 887
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 888 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 940
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 941 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 996
Query: 796 VR 797
VR
Sbjct: 997 VR 998
Score = 76 (31.8 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L C V L GP GTGKT T++ + +L+
Sbjct: 634 WDEQLDPRL----NAKQKEAVLAITTPL-CIQLPPV-LIIGPYGTGKTFTLAQAVKHILQ 687
Query: 298 IK--CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 688 QQETSRILICTHSNSA 703
Score = 58 (25.5 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPVALCS 1057
Score = 43 (20.2 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 467 SENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKL-FSHSVD 507
SEN +++L++ + S L + V+SE LE + HS D
Sbjct: 226 SENKQLSGSYMETLIEKWMSSLSPEKVLSECLEGVQVEHSPD 267
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 185 (70.2 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 760 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFV 819
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 820 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 875
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 876 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 928
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 929 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVSVERVLNVQGKQFRVLFLST 984
Query: 796 VR 797
VR
Sbjct: 985 VR 986
Score = 71 (30.1 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L + + GP GTGKT T++ + +L+
Sbjct: 622 WDEQLDPRL----NAKQKEAVLAITTPLSIQLPPVLII--GPYGTGKTFTLAQAVKHILQ 675
Query: 298 IK--CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 676 QQDTSRILICTHSNSA 691
Score = 58 (25.5 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1015 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1045
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 183 (69.5 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 831 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 886
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 887 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 939
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 940 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 995
Query: 796 VR 797
VR
Sbjct: 996 VR 997
Score = 73 (30.8 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L + + GP GTGKT T++ + +L+
Sbjct: 634 WDEQLDPRL----NAKQKEAVLAITTPLSIQLPPVLII--GPYGTGKTFTLAQAVKHILQ 687
Query: 298 IK-CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 688 QQETRILICTHSNSA 702
Score = 58 (25.5 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 183 (69.5 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 831 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 886
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 887 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 939
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 940 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 995
Query: 796 VR 797
VR
Sbjct: 996 VR 997
Score = 73 (30.8 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L + + GP GTGKT T++ + +L+
Sbjct: 634 WDEQLDPRL----NAKQKEAVLAITTPLSIQLPPVLII--GPYGTGKTFTLAQAVKHILQ 687
Query: 298 IK-CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 688 QQETRILICTHSNSA 702
Score = 58 (25.5 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 185 (70.2 bits), Expect = 8.5e-12, Sum P(3) = 8.5e-12
Identities = 77/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T S+S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLSTSQYLCQLDLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 831 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 886
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 887 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 939
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 940 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 995
Query: 796 VR 797
VR
Sbjct: 996 VR 997
Score = 71 (30.1 bits), Expect = 8.5e-12, Sum P(3) = 8.5e-12
Identities = 26/75 (34%), Positives = 35/75 (46%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L + + GP GTGKT T++ +L+
Sbjct: 634 WDEQLDPRL----NAKQKEAVLAITTPLSIQLPPVLII--GPYGTGKTFTLAQAAKHILQ 687
Query: 298 IK-CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 688 QQETRILICTHSNSA 702
Score = 58 (25.5 bits), Expect = 8.5e-12, Sum P(3) = 8.5e-12
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPVALCS 1056
Score = 41 (19.5 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 467 SENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKL-FSHSVD 507
SEN +++L++ + S L + V+SE +E + HS D
Sbjct: 226 SENKQLSGSYMETLIEKWMSSLSPEKVLSECIEGVQVEHSPD 267
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 193 (73.0 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 77/240 (32%), Positives = 115/240 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLA-GINHAVLIGDECQLPAMV 625
T S+S L + +EP F +++DEAAQ E E+ +PL LA VL GD QL V
Sbjct: 764 TLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALAVKSTRVVLAGDHMQLSPFV 823
Query: 626 ESKISDGASFGRSLFERLTLLNHSKH----LLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
S+ + + SL +RL S++ LL YR H +I + + FY +++ A+
Sbjct: 824 YSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLM--AS 881
Query: 682 VKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV-- 738
K P +F P TF G +E + N EV +++ ++++ K W
Sbjct: 882 GKQP-------PHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVS 934
Query: 739 -GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVR 797
G + SIGVVSPY QV IR +E K V V+ V QG + ++ +STVR
Sbjct: 935 WGKLEEGSIGVVSPYADQVFRIR----AELRKKRMSEVSVERVLNVQGKQFRVLFLSTVR 990
Score = 75 (31.5 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q A+ A L + + + GP GTGKT T++ + +L+
Sbjct: 627 WDEQLDPRL----NAKQKEAILAITTPLSINLPPVLII--GPYGTGKTFTLAQAVKHILK 680
Query: 298 I-KCRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 681 QPESRVLICTHSNSA 695
Score = 61 (26.5 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS---SESIWGTLV 844
GF+SN + +N A+TRA+ + ++G+ L S W T +
Sbjct: 1019 GFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETFI 1061
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 921 KAAADPMCSSNPKEVKFNLQEA 942
+A P S+ P VK+ LQEA
Sbjct: 1597 QAPFPPDHSAGPLPVKYLLQEA 1618
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 1009 NFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQEEELLQKAKSLAKNDSN 1058
N R A+ ++ S SP G +Q T E+ELLQ+ K D N
Sbjct: 1228 NLRPAASRTSPVLYGFSHASP--LGLNQQQNT-EKELLQEPSGNGKMDIN 1274
Score = 37 (18.1 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 1351 KSKLSYGQIGRIAVMILGSGKLHNGFY 1377
+SK + I + + +GS NG+Y
Sbjct: 1830 QSKKNSDPISLLQELSIGSSNSSNGYY 1856
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 183 (69.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 830
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 831 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 886
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 887 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 939
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 940 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 995
Query: 796 VR 797
VR
Sbjct: 996 VR 997
Score = 71 (30.1 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L + + GP GTGKT T++ + +L+
Sbjct: 634 WDEQLDPRL----NAKQKEAVLAITTPLAIQLPPVLII--GPYGTGKTFTLAQAVKHILQ 687
Query: 298 IK-CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 688 QQETRILICTHSNSA 702
Score = 58 (25.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 188 (71.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 99/373 (26%), Positives = 164/373 (43%)
Query: 480 LLDSFRSLLFQKNVVSEELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWN 539
L + S +F +++ LFS + D +A R++ Q+ ++ E L N
Sbjct: 963 LAEGIISEIFPFTGFFKDIPDLFSGNNSADLKVAHSCWRHIEQIFEKLDE-FRAFELLRN 1021
Query: 540 SLDELNLPCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNF----LVIDEAAQL 595
D ++ LL K A + T + + L ++ L F +V++EAAQ+
Sbjct: 1022 GRDR-------TEYLL----VKEAKIIAMTCTHA-ALRRNELVKLGFRYDNIVMEEAAQI 1069
Query: 596 KESESTIPLQLA----GINHA---VLIGDECQLPAMVESK-ISDGASFGRSLFERLTLLN 647
E E+ IPL L G N ++IGD QLP +V+++ ++ +SLF RL L+
Sbjct: 1070 LEVETFIPLLLQNPQDGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLS 1129
Query: 648 HSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINI-- 705
LD Q R I+ Q+ N + + +V ++ G F P+ FI+I
Sbjct: 1130 VPNVQLDRQGRARAQIAEL--YQWRYNGLGNLPHVDGLPQFQNANAGFAF-PFQFIDIPD 1186
Query: 706 IGGREEF--IYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKI 763
G E H +N+ E + Y +G I +++ Y Q IR
Sbjct: 1187 FNGHGETQPSPHFYQNLGEAEYACALYT--YMRILGYPAE-KISILTTYNGQAQLIRDVF 1243
Query: 764 GSEYENKD--GFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
+ G KV +VD +QG + D II+S V+ +IG I + +R+ VAL+RAR
Sbjct: 1244 QRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKTR---NIGHIRDVRRLVVALSRAR 1300
Query: 822 HCLWILGNERTLI 834
L++LG + +
Sbjct: 1301 LGLYVLGRSKVFM 1313
Score = 69 (29.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 272 GVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
G+ + GPPGTGKT ++ ++ RTL T +N A+ +L + + L
Sbjct: 821 GLTMVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQALNQLFEKIIAL 873
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 200 (75.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 77/268 (28%), Positives = 127/268 (47%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL A VL+GD QLP +V+++ + SLF+RL
Sbjct: 763 DFCIVDEASQISQPVCVGPLFYA--RRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRLE 820
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY-EKHYLPGT--EFGPYT 701
L + L++QYRM+ I N Y ++ G+ + S LP E G
Sbjct: 821 LHRDAVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLA 880
Query: 702 FINI-IGGREEFIYHSCRNMVEVSVVIK----------ILQKLYKAWV--GSKQMVSIGV 748
+I + + C + + V + ++ KL + G K IGV
Sbjct: 881 WIQATLLPSNPVCFLDCSAVPALETVEQGGISNHTEAALIHKLLLLLIKAGCKPG-DIGV 939
Query: 749 VSPYTAQVVAIRKKIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTG-GSIG- 805
++PY Q+ I S FT V+V +VD +QG ++ +I++S VR G +G
Sbjct: 940 IAPYRQQLRTI-----SGLLQASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPLGE 994
Query: 806 FISNPQRVNVALTRARHCLWILGNERTL 833
+ + +R+NVA+TRA+ L +LG+ TL
Sbjct: 995 LLKDWRRLNVAITRAKSKLLMLGSATTL 1022
Score = 53 (23.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 633 LNKPQKQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILHACGFSVLLTSYTH 686
Query: 310 VAITELASRALR 321
A+ + + R
Sbjct: 687 SAVDNILLKLKR 698
Score = 51 (23.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 307 PTNVAITELASRALRLVKESYKRDSRNNTPFCPLGDIL-LFGNKD 350
P +T SR+L + RD TP C GD++ L G +D
Sbjct: 19 PGQTTLTVSCSRSLSPTETCLLRDGWEMTPVCR-GDVVHLEGQRD 62
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 174 (66.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 59/169 (34%), Positives = 86/169 (50%)
Query: 692 LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVGSKQMV--SI 746
LP F P F ++G E E S N E + V L++L + G ++ S+
Sbjct: 770 LPQQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSV 828
Query: 747 GVVSPYTAQVVAIR---KKIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG 802
GV+SPY QV IR K+ E D +KV SV+ FQG E +I+ISTVR +
Sbjct: 829 GVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 888
Query: 803 -------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
++GF+ NP+R NVA+TRA+ L ++GN L+ + W T +
Sbjct: 889 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKTFL 936
Score = 79 (32.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
+GPPGTGKT T+ + +++ K LACTP+N L R LR+
Sbjct: 524 FGPPGTGKTVTLVEAIKQVVKHLPKAHILACTPSNSGADLLCQR-LRV 570
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 183 (69.5 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 832 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 887
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ Y P TF G +E + N EV V++ +++L + W
Sbjct: 888 ASGKQPAHKDFY-------PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 940
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 941 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 996
Query: 796 VR 797
VR
Sbjct: 997 VR 998
Score = 69 (29.3 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 238 WDEKFGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLR 297
WDE+ P L N Q AV A L + + GP GTGKT T++ + +L+
Sbjct: 634 WDEQLDPRL----NAKQKEAVLAITTPLAIQLPPVLII--GPYGTGKTFTLAQAVKHILQ 687
Query: 298 IK--CRTLACTPTNVA 311
+ R L CT +N A
Sbjct: 688 QQETSRILICTHSNSA 703
Score = 58 (25.5 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1057
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 159 (61.0 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 38/126 (30%), Positives = 72/126 (57%)
Query: 709 REEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYE 768
REE + N VE +V+++++ L V + + IGV++ Y +Q+ ++ K+
Sbjct: 1445 REEAKGNRIVNPVEAQLVVQLVESLMTLGVPANE---IGVMTHYRSQLALLKHKLLRGKN 1501
Query: 769 NKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWIL 827
D V++ + D FQG +++++++S VR N IG + + +R+NVA TRA+ L ++
Sbjct: 1502 TGDATAVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVAFTRAKTKLLVI 1561
Query: 828 GNERTL 833
G+ TL
Sbjct: 1562 GSRETL 1567
Score = 91 (37.1 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHA---VLIGDECQLPAMVESKISDGASFGRSLFE 641
++ ++DEA+Q+ T+P+ L I A VL+GD QLP +V+++ + SLF+
Sbjct: 1278 DYCIVDEASQI-----TLPICLGPIRMARTFVLVGDHNQLPPLVQNEEARKGGLDVSLFK 1332
Query: 642 RLTLLNHSKHL-LDIQYRMHPSISLFPNLQFYRNQILDG 679
L+ + + L+ QYRM + N Y + G
Sbjct: 1333 LLSDTHPDSVVNLEHQYRMCEDVMALSNELIYEGHLKCG 1371
Score = 60 (26.2 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITEL 315
G PGTGKT T++ ++ +L+R L + T+ A+ +
Sbjct: 1172 GMPGTGKTTTIAHIIRALIRQGKSVLLTSYTHSAVDNI 1209
Score = 46 (21.3 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 1296 DKTLQKFVELSTEEFFHCIFPLDWRES 1322
D+ L KFV L + + C P D ES
Sbjct: 1573 DEMLSKFVRLMEDRNWVCDLPADALES 1599
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 159 (61.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 644 TLLNHSKHLLDI---QYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHY---LPGTEF 697
T H++ D+ +Y +H ++ P + +RN + D + S E+ L E
Sbjct: 317 TCFYHNQLKTDVKCHEYSLHTILN--PQPKKFRN-LFDPLVLIDTSLERDVEKRLETYEH 373
Query: 698 GPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ-- 755
+ +I ++ F Y N+ E + I Q+L K V Q I +++PY Q
Sbjct: 374 AVFDTNSINKTKQGFSY---ANLAEAKIAIGHYQRLLKYGV---QPSDIAIITPYKGQTS 427
Query: 756 -VVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVN 814
V + ++ G+E D + +VD QG E +++I + VR N ++GF+S +R+N
Sbjct: 428 LVTKLMEEFGAETGYTDFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLN 487
Query: 815 VALTRARHCLWILGNERTLISSE 837
V +TRA+ +GN L S+
Sbjct: 488 VVITRAKRHFMFIGNGYLLAESK 510
Score = 123 (48.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 567 FSTASSSYK---LHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPA 623
F+T +S+ + K +P +IDEAAQ+ E++ T P + + V+ GD QLPA
Sbjct: 213 FATIGASFVDFVMKHKKFDPC-LCIIDEAAQVMEAQ-TWPA-VYKMKRIVMAGDPKQLPA 269
Query: 624 MVESKISDGASFGRSLFERLTLL--NHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
+V + + S+ +R+ N S +L+ QYR + I+ + N FY NQ+ +
Sbjct: 270 LVFTDEAKAFGLQNSVMDRILEKKNNFSWIMLENQYRSNAKIATWSNTCFYHNQLK--TD 327
Query: 682 VKSKSYEKHYLPGTEFGPYTFINI 705
VK Y H + + P F N+
Sbjct: 328 VKCHEYSLHTILNPQ--PKKFRNL 349
Score = 85 (35.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVK 324
GPPGTGKT T+++LL L++ K + + PT A+ + + +K
Sbjct: 89 GPPGTGKTFTLTLLLCRLIQQKKQVVVLAPTREALANIRMMTKKTLK 135
Score = 37 (18.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 1296 DKTLQKFVELSTEEFFHCIF 1315
D +L++ VE E + H +F
Sbjct: 357 DTSLERDVEKRLETYEHAVF 376
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 178 (67.7 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 69/232 (29%), Positives = 114/232 (49%)
Query: 608 GINHAVLIGDECQLPAMVESK-ISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLF 666
G+ +LIGD QLP +V+++ ++ + F +SLF RL L LD Q R PSIS
Sbjct: 1194 GLKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSISEL 1253
Query: 667 PNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINI-----IG-GREEFIYHSCRNM 720
+ + Y+ + D VK + K PG + Y IN+ G G E + +N+
Sbjct: 1254 FSWK-YKG-LQDLPLVKEQLQFKLANPGLAYD-YQLINVDESDGYGVGESEPTPYFYQNL 1310
Query: 721 VEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD------GFT 774
E ++ + Q L S++ I V++ Y Q +R ++ +D G
Sbjct: 1311 GEAEYIVAMFQYLIAIGYPSEK---ITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLP 1367
Query: 775 VKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWI 826
+K+ ++D +QG + DII++S VR G I + +R+ VA++RAR L+I
Sbjct: 1368 LKITTIDKYQGQQNDIILLSLVRTK---QYGHIRDVRRLIVAMSRARLGLYI 1416
Score = 76 (31.8 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 47/212 (22%), Positives = 86/212 (40%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKC--RTLACTPTNVAITELASRALRL-VKESYK-RDSRN 333
GPPGTGKT ++ ++ RTL T +N A+ +L + RL + E Y R
Sbjct: 886 GPPGTGKTDIAVQIISNIYHSSPNERTLIITHSNQALNQLFEKIYRLDINERYLLRLGHG 945
Query: 334 NTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSGWRHCFSSMIDLLED 393
KD K G + +LD R+K+L + + S D+
Sbjct: 946 QKQLSSTNST----QKDFTKT--GRIDFWLDLRLKKLDQ----VDKLAKSISVTDDVSYT 995
Query: 394 CVSQYHIYVEKLKEREDCNENQSEEKKCRKETEGSKGECKPFLEYVRESFNCAVIPLRNC 453
C + H + + R + + Q + + + +G + + K +++E++ + N
Sbjct: 996 CDTALHFFSYHILSRFE--KFQYDLSLLQDDDDGDEKKIK----FIKENYPFKKFFIENS 1049
Query: 454 IF----IFCTHLPKTYISENSFQDMVALKSLL 481
I +F T T + +N Q ++ +K L
Sbjct: 1050 ILKNDKLFDTTTTTTSV-DNHHQSLLNIKKNL 1080
Score = 57 (25.1 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 524 HQRRSECLSVLRNLWNSLDELNLPCTTSK--QLLK------DFCFKRASLFFSTASSSYK 575
HQ L LWN + E+ K +LLK ++ + S + +
Sbjct: 1070 HQSLLNIKKNLIELWNYIKEIFKELEECKVFELLKSPNDRYNYLLLKQSKIVAMTCTHAA 1129
Query: 576 LHSVKIEPLNF----LVIDEAAQLKESESTIPLQL 606
L ++ L F L+++E+AQ+ + ES IPLQL
Sbjct: 1130 LKRNELLRLGFKFDNLLMEESAQISDIESFIPLQL 1164
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 403 EKLKEREDCNENQSEEKKCRKETEGS 428
+KLKE ++ N N + K + E +
Sbjct: 802 DKLKEEQENNNNNNNNFKIKFNNENN 827
Score = 39 (18.8 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 13/55 (23%), Positives = 31/55 (56%)
Query: 23 FSWSLENIFNQSLFKDQVEKIP-ESFQSVKQY-FGSFVFPLLEETRMQLRSGLEA 75
+++ ++N + L KDQ I ++ Q +++ F +F P ++E ++ S +E+
Sbjct: 352 YNFDIDNFTGEELTKDQATGIHYQNIQELQKIVFKNF--PEIKEIALRNVSFVES 404
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 311 AITELASRALRLVKESYKRDSRNNT 335
+++E + LRL K+ ++ S NN+
Sbjct: 224 SLSEPLEKKLRLFKKKIEKLSNNNS 248
Score = 39 (18.8 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 528 SECLSVLRNLWNSLDE 543
S C +R+ WNS+ E
Sbjct: 572 SSCKPHIRDEWNSIKE 587
Score = 39 (18.8 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 10/63 (15%), Positives = 31/63 (49%)
Query: 352 LKVNPGFEEIYLDYRV---KRLMECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKER 408
+K N F++ +++ + +L + + + S++++ ++ + ++ E KE
Sbjct: 1035 IKENYPFKKFFIENSILKNDKLFDTTTTTTSVDNHHQSLLNIKKNLIELWNYIKEIFKEL 1094
Query: 409 EDC 411
E+C
Sbjct: 1095 EEC 1097
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 192 (72.6 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 70/247 (28%), Positives = 118/247 (47%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 729 DFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 786
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFIN 704
++ L +QYRM+ I N Y ++ G++ + + LP +
Sbjct: 787 QNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVN--LPN--------LK 836
Query: 705 IIGGREEFIYHSCRN--MVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKK 762
+ EF N M+ + L G K IG+++PY Q+ I
Sbjct: 837 DVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKAGCKPS-DIGIIAPYRQQLKIINDL 895
Query: 763 IGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNVALTRAR 821
+ + + V+V +VD +QG ++ II++S VR N G IG + + +R+NVA+TRA+
Sbjct: 896 L---FHSSIRM-VEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAK 951
Query: 822 HCLWILG 828
H L +LG
Sbjct: 952 HKLILLG 958
Score = 54 (24.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTN 309
LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L + T+
Sbjct: 598 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYTCGFSVLLTSYTH 651
Query: 310 VAITELASRALRLVK 324
A+ + L+L K
Sbjct: 652 SAVDNIL---LKLAK 663
Score = 41 (19.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 466 ISENSFQDMVALKSLLDSFRSLLFQKNVVSEELEKLFSHS 505
+ E +FQ + ++ L + +R L Q+ V E E L S S
Sbjct: 149 LQEFAFQTVQEIRHLKEMYRLNLNQEEVKQEVEEYLPSFS 188
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 172 (65.6 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 57/165 (34%), Positives = 85/165 (51%)
Query: 692 LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVGSKQMV--SI 746
LP +F P F ++G E E S N E + V L++L + G ++ S+
Sbjct: 769 LPRQDF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSV 827
Query: 747 GVVSPYTAQVVAIR---KKIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG 802
GV+SPY QV IR K+ + D +KV SV+ FQG E +I+ISTVR +
Sbjct: 828 GVISPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 887
Query: 803 -------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
++GF+ NP+R NVA+TRA+ L ++GN L+ + W
Sbjct: 888 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 931
Score = 74 (31.1 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
+GPPGTGKT T+ + +++ K LAC P+N L R LR+
Sbjct: 523 FGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQR-LRV 569
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 190 (71.9 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 84/317 (26%), Positives = 148/317 (46%)
Query: 534 LRNLWNSLDELNL--PCTTSKQLLKDFCFKRASLFFSTASSSYKLHSVKIEPLNF----L 587
+ +++N L+E T K K A + T + + L ++ L F +
Sbjct: 1017 ISDIFNELEEFRAFELLRTGLDRSKYLLVKEAKIIAMTCTHA-ALKRKELVNLGFRYDNI 1075
Query: 588 VIDEAAQLKESESTIPLQLA----GINHA---VLIGDECQLPAMVESK-ISDGASFGRSL 639
+++E+AQ+ E E+ IPL L G+N ++IGD QLP ++++ ++ +SL
Sbjct: 1076 LMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSL 1135
Query: 640 FERLTLLNHSKHLLDIQYRMHPSI-SLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFG 698
F RL L LD Q R SI SL+ ++ ++ D ++ + K PG
Sbjct: 1136 FTRLVRLGVPTVDLDGQGRARASICSLY---KWRYKKLEDLQHIFERDEYKQANPGFVHD 1192
Query: 699 PYTFINI-----IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYT 753
Y IN+ +G E Y +N+ E ++ + +Y +G I +++ Y
Sbjct: 1193 -YQLINVEDFKGVGESEPNPYFY-QNLAEAEYIVAVY--MYMRLLGYPA-AKISILTTYN 1247
Query: 754 AQVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQ 811
Q IR I + N G+ K+ +VD +QG + D I+IS VR ++G + + +
Sbjct: 1248 GQKHLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTK---AVGHLRDVR 1304
Query: 812 RVNVALTRARHCLWILG 828
R+ VA++RAR L++ G
Sbjct: 1305 RLVVAMSRARLGLYVFG 1321
Score = 71 (30.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 272 GVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
G+ L GPPGTGKT ++ ++ RTL T +N A+ +L + + L
Sbjct: 830 GLTLVVGPPGTGKTDVAVQIISNIYHNHPNQRTLIVTHSNQALNQLFEKIMAL 882
Score = 45 (20.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 370 LMECFAPLSGWRHCFSSM-IDLLED------CVSQYHIYVEKLKERE--DCNENQSEEKK 420
L E A L HCF+SM I+L + +S +H + +E+E + E + K+
Sbjct: 158 LRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRRREQELREVPEWRKYWKR 217
Query: 421 CRKETEGSKGE 431
K+ + SK E
Sbjct: 218 LLKKEKDSKPE 228
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 187 FFIYLTNILPSKRIWNSL 204
F I L +LP++R +N++
Sbjct: 270 FIIDLEALLPTRRFFNTV 287
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 171 (65.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 58/169 (34%), Positives = 86/169 (50%)
Query: 692 LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVGSKQMV--SI 746
LP F P F ++G E E S N E + V L++L + G ++ ++
Sbjct: 770 LPQQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNV 828
Query: 747 GVVSPYTAQVVAIR---KKIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG 802
GV+SPY QV IR K+ E D +KV SV+ FQG E +I+ISTVR +
Sbjct: 829 GVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 888
Query: 803 -------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLV 844
++GF+ NP+R NVA+TRA+ L ++GN L+ + W T +
Sbjct: 889 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKTFL 936
Score = 74 (31.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
+GPPGTGKT T+ + +++ K LAC P+N L R LR+
Sbjct: 524 FGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQR-LRV 570
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 166 (63.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 72/254 (28%), Positives = 119/254 (46%)
Query: 587 LVIDEAAQLKESESTIPLQL-------AGINHAVLIGDECQLPAMVESKISDGAS-FGRS 638
L+++E+AQ+ E E+ IP+ L A + +LIGD QLP +V++ S +S
Sbjct: 1120 LLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQS 1179
Query: 639 LFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFG 698
LF R L L+ Q R PS++ N + YR+ + D + VK + G +
Sbjct: 1180 LFTRFVRLGIPYIELNAQGRARPSLAKLYNWR-YRD-LGDLSIVKEAPIFQRANAGFSY- 1236
Query: 699 PYTFINI--IGGREEFIYHSC--RNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTA 754
Y +N+ GR E +N E ++ + +Y +G I +++ Y
Sbjct: 1237 EYQLVNVPDYEGRGESTPSPWFYQNQGEAEYIVSVY--IYMRLLGYPAN-KISILTTYNG 1293
Query: 755 QVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQR 812
Q + IR I G KV +VD FQG + D I++S VR +G + + +R
Sbjct: 1294 QKLLIRDVINRRCVPYPFIGPPSKVTTVDKFQGQQNDFILLSLVRTRF---VGHLRDVRR 1350
Query: 813 VNVALTRARHCLWI 826
+ VA++RAR L++
Sbjct: 1351 LVVAMSRARLGLYV 1364
Score = 81 (33.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 244 PSLSSTLNEP-QVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKC-- 300
P +S P QVGA+ + ++ G+ + GPPGTGKT T +L ++L C
Sbjct: 859 PKQNSVKFTPTQVGAIISGIQ-------PGLTMVVGPPGTGKTDTAVQIL-NVLYHNCPS 910
Query: 301 -RTLACTPTNVAITELASRAL 320
RTL T +N A+ +L + +
Sbjct: 911 QRTLIITHSNQALNDLFEKIM 931
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 168 (64.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 58/165 (35%), Positives = 83/165 (50%)
Query: 692 LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVGSKQMV--SI 746
LP F P F ++G E E S N E + V L+ L + G ++ S+
Sbjct: 749 LPRQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSV 807
Query: 747 GVVSPYTAQVVAIRK---KIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG 802
GV+SPY QV IR K+ E D +KV SV+ FQG E +I+ISTVR +
Sbjct: 808 GVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 867
Query: 803 -------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
++GF+ NP+R NVA+TRA+ L ++GN L+ + W
Sbjct: 868 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 911
Score = 74 (31.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
+GPPGTGKT T+ + +++ K LAC P+N L R LR+
Sbjct: 503 FGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQR-LRV 549
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 168 (64.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 58/165 (35%), Positives = 83/165 (50%)
Query: 692 LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVGSKQMV--SI 746
LP F P F ++G E E S N E + V L+ L + G ++ S+
Sbjct: 769 LPRQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSV 827
Query: 747 GVVSPYTAQVVAIRK---KIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG 802
GV+SPY QV IR K+ E D +KV SV+ FQG E +I+ISTVR +
Sbjct: 828 GVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 887
Query: 803 -------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
++GF+ NP+R NVA+TRA+ L ++GN L+ + W
Sbjct: 888 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 931
Score = 74 (31.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
+GPPGTGKT T+ + +++ K LAC P+N L R LR+
Sbjct: 523 FGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQR-LRV 569
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 168 (64.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 59/165 (35%), Positives = 83/165 (50%)
Query: 692 LPGTEFGPYTFINIIGGRE-EFIYHSCRNMVEVSVVIKILQKLY--KAWVGSKQMV--SI 746
LP F P F ++G E E S N E + V L+ L + G ++ S+
Sbjct: 769 LPRQGF-PIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSV 827
Query: 747 GVVSPYTAQVVAIR---KKIGSEYENKDGFT-VKVKSVDGFQGGEEDIIIISTVRCNTGG 802
GV+SPY QV IR K+ E D +KV SV+ FQG E +I+ISTVR +
Sbjct: 828 GVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSF 887
Query: 803 -------SIGFISNPQRVNVALTRARHCLWILGNERTLISSESIW 840
++GF+ NP+R NVA+TRA+ L I+GN L+ + W
Sbjct: 888 VQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNP-LLLGHDPDW 931
Score = 74 (31.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
+GPPGTGKT T+ + +++ K LAC P+N L R LR+
Sbjct: 523 FGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQR-LRV 569
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 152 (58.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 85/335 (25%), Positives = 145/335 (43%)
Query: 514 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL--LKDFCFKRASLFFSTAS 571
F G+ Y + C ++ ++ L+E L K K A + T +
Sbjct: 981 FKGRTYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1039
Query: 572 -SSYKLHS-VKIE-PLNFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQL 621
++ K H VK+ + ++++EAAQ+ E E+ IPL L + ++IGD QL
Sbjct: 1040 HAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQL 1099
Query: 622 PAMVESK-ISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
P ++++ ++ +SLF R + LD Q R S+ NL +R + L
Sbjct: 1100 PPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--G 1154
Query: 681 NVKSKSYEKHYLPGTEFGPYTF--INI-----IGGREEFIYHSCRNMVEVSVVIKILQKL 733
N+ + Y F IN+ +G E Y +N+ E V+ + +
Sbjct: 1155 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1211
Query: 734 YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDII 791
Y +G I +++ Y Q IR I + G KV +VD FQG + D I
Sbjct: 1212 YMCLLGYPAD-KISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYI 1270
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWI 826
++S VR ++G + + +R+ VA++RAR L+I
Sbjct: 1271 LLSLVRTR---AVGHLRDVRRLVVAMSRARLGLYI 1302
Score = 88 (36.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/141 (24%), Positives = 61/141 (43%)
Query: 272 GVELRWGPPGTGKTKTVSMLLFSLLRI-KCRTLACTPTNVAITELASRALRL-VKESYK- 328
G+ + GPPGTGKT ++ ++ + RTL TP+N A+ +L + + L + E +
Sbjct: 817 GLTMVVGPPGTGKTDVAVQIISNIYHFPEQRTLIVTPSNPALNQLFEKIMALDIDERHLL 876
Query: 329 RDSRNNTPFCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLMECFA-PLSGWRHCFSSM 387
R D +G + + I L VKRL + P C ++
Sbjct: 877 RLGHGEEELETEKDFSRYGRVNYVLAR----RIELLEEVKRLQKSLGVPGDASYTCETAG 932
Query: 388 IDLLEDCVSQYHIYVEKLKER 408
L +S++ Y+ K+K +
Sbjct: 933 YFFLYQVMSRWEEYISKVKNK 953
Score = 44 (20.5 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 496 EELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL 544
+ L+K D ++ G +L Q+ R E +S ++N N L ++
Sbjct: 912 KRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNMLPDV 960
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 468 ENSFQDMVALKSLLDSFRSLL 488
E SFQ+ L L+ F S+L
Sbjct: 213 EQSFQERRFLSQLIQKFISVL 233
Score = 37 (18.1 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 371 MECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED 410
+E P W F++++D D H Y+ L RE+
Sbjct: 260 LEALLPTRRW---FNTILD---DSHLLVHCYLSNLVHREE 293
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 182 (69.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 76/242 (31%), Positives = 116/242 (47%)
Query: 569 TASSSYKLHSVKIEPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 625
T ++S L + +EP F +++DEAAQ E E+ +PL LA + VL GD QL V
Sbjct: 776 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLAGDHMQLSPFV 835
Query: 626 ESKISDGASFGRSLFERLTLLNH------SKHLLDIQYRMHPSISLFPNLQFYRNQILDG 679
S+ + + SL +RL H + LL YR H +I + + FY +++
Sbjct: 836 YSEFARERNLHVSLLDRL--YEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM-- 891
Query: 680 ANVKSKSYEKHYLPGTEFGPYTFINIIGGR-EEFIYHSCRNMVEVSVVIKILQKLYKAWV 738
A+ K +++ EF P TF G +E + N EV V++ +++L + W
Sbjct: 892 ASGKQPAHK-------EFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 944
Query: 739 ---GSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIST 795
G SIGVV+PY QV IR +E K V V+ V QG + ++ +ST
Sbjct: 945 VAWGKLDDGSIGVVTPYADQVFRIR----AELRKKRLSDVNVERVLNVQGKQFRVLFLST 1000
Query: 796 VR 797
VR
Sbjct: 1001 VR 1002
Score = 58 (25.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 805 GFISNPQRVNVALTRARHCLWILGNERTLIS 835
GF+SN + +N A+TRA+ + ++G+ L S
Sbjct: 1031 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1061
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 120 (47.3 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 38/124 (30%), Positives = 69/124 (55%)
Query: 719 NMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVK 778
N E +V+ +L+ L K+ + + IGV++PY AQV + KK+ S+ + ++
Sbjct: 944 NYCEAGIVMHLLRYLLKSGYEASR---IGVIAPYRAQV-ELFKKLASKLDTD----LECN 995
Query: 779 SVDGFQGGEEDIIIISTVRCNTGGSIG---------FISNPQRVNVALTRARHCLWILGN 829
+VD FQG ++++II S + TGG + + +R+ VA+TRA++ L +LG+
Sbjct: 996 TVDQFQGRDKNLIIYSCSK--TGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGD 1053
Query: 830 ERTL 833
+ L
Sbjct: 1054 IKCL 1057
Score = 100 (40.3 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
++ ++DEA Q+ + T+ L + VL+GD QLP +V SK + +LF+RL
Sbjct: 766 DYCIVDEATQVLQP--TVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLD 823
Query: 645 LLNHSKHLLDIQYRMHPSISLFPN 668
+ +L +QYRM+ +I+ N
Sbjct: 824 S-EKATAVLSLQYRMNKTITRLAN 846
Score = 59 (25.8 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTP-TNVAITELASRAL 320
G PGTGKT+T+ + L LL + +++ T T+ A+ L R L
Sbjct: 659 GLPGTGKTQTL-VALVRLLHLLGKSVLITAQTHSAVDNLIMRLL 701
Score = 39 (18.8 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 340 LGDILLFGNKDRLKVNPGF----EEIYLDYRVKR 369
LG+ ++ + RL V GF E LD R++R
Sbjct: 531 LGEYVVISSTSRLAVAAGFIVSIEARRLDLRLER 564
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 169 (64.5 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 80/288 (27%), Positives = 129/288 (44%)
Query: 587 LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMVESKISDGASFGRSLFERLTL 645
+ +DEAAQ E E+ +PL LA + VL GD Q+ + S + SL ERL
Sbjct: 954 IFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPELFSAFAKERKLHISLLERLYD 1013
Query: 646 LNHS----KHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYT 701
S K LL YR H +I F + FY +++ A+ K +++ Y P T F T
Sbjct: 1014 HYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLV--ASGKQPRHDRFY-PLTFFT--T 1068
Query: 702 FINIIGGREEFIYHSCRNMVEVSVVIKILQKLY-KAWVGSKQMVSIGVVSPYTAQVVAIR 760
+ + +++ + EV + L+K + AW G SIG+++PY+ QV IR
Sbjct: 1069 RGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAW-GKLNDTSIGIMTPYSDQVFRIR 1127
Query: 761 KKI------GSEYE---NKDG------F--TVKVKSVDGFQGGEEDIIIISTVRCNTGGS 803
++ G E N G F TV+ + QG +++ +
Sbjct: 1128 SELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSASTTSIG-DADAD 1186
Query: 804 IGFISNPQRVNVALTRARHCLWILGNERTLIS---SESIWGTLV--CD 846
GF+SN + +N A+TRA+ + ++G+ L S +W + CD
Sbjct: 1187 YGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICD 1234
Score = 66 (28.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 27/77 (35%), Positives = 35/77 (45%)
Query: 238 WDEK--FGPSLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSL 295
W K + S LN Q AV A L K L GP GTGKT T++ + L
Sbjct: 792 WTPKKQWADSCEPKLNAKQREAVNAITTALSI--KLPPILLIGPFGTGKTYTLAQAIKQL 849
Query: 296 L-RIKCRTLACTPTNVA 311
L + + + L CT +N A
Sbjct: 850 LTQPEAKILICTHSNSA 866
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 170 (64.9 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 70/261 (26%), Positives = 113/261 (43%)
Query: 614 LIGDECQLPAMVESKISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYR 673
LI +C + + SLF+RL + L +QYRM+ I N Y
Sbjct: 780 LIHHQCFKGCVKSVSLVRELGMSESLFKRLERNQEAVVQLTVQYRMNSQIMALSNKLVYE 839
Query: 674 -----------NQILDGANVKSKSYEKHYLPGTEF----------GPYTFINI--IGGRE 710
N ++ ++K+ E + E P F+N I E
Sbjct: 840 GRLECASDRVSNAVVKLPHIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNTEKIPALE 899
Query: 711 EFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENK 770
N +E +V + + KA G + IG+++PY Q+ K I + + +
Sbjct: 900 TEEKGGISNWIEAKLVFCLTKLFLKA--GCRPS-DIGIIAPYRQQL----KVISNYFNSL 952
Query: 771 DGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWILGN 829
V+V +VD +QG ++ +II+S VR N G +G + + +R+NVALTRA+H L +LG
Sbjct: 953 SASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGC 1012
Query: 830 ERTLISSESIWGTLVCDAKAR 850
TL S L+C K++
Sbjct: 1013 VPTL-SRFLCLEQLICHLKSK 1032
Score = 58 (25.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLAC 305
LN+PQ A+ L L D+ V G PGTGKT T+ L+ S L +K T +C
Sbjct: 627 LNKPQKQAMKRVL--LSKDYTLIV----GMPGTGKTTTICTLV-STLHLKTCT-SC 674
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 112 (44.5 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL + VL+GD QLP +V ++ + SLF+RL
Sbjct: 14 DFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 71
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGAN 681
++ L +QYRM+ I N Y ++ G++
Sbjct: 72 QNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 108
Score = 99 (39.9 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 699 PYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV 756
P F+N + E+ N+ E +V+ + KA G +IG+++PY Q+
Sbjct: 148 PVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYLTSIFVKA--GCNPC-NIGIIAPYRQQL 204
Query: 757 VAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSI 804
I + + G V+V +VD +QG ++ II++S VR N G++
Sbjct: 205 KVINDLLS---HSSVGM-VEVNTVDKYQGRDKSIILVSFVRSNRDGTV 248
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 172 (65.6 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 719 NMVEVSVVIKILQKLY-KAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKV 777
N +E +V L KLY KA G + IG+++PY Q+ K I + + + V+V
Sbjct: 913 NWIEAKLVFH-LTKLYLKA--GCRPS-DIGIIAPYRQQL----KMISNYFNSLSASAVEV 964
Query: 778 KSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWILGNERTLISS 836
+VD +QG ++ +II+S VR N G +G + + +R+NVALTRA+H L +LG TL
Sbjct: 965 NTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRF 1024
Query: 837 ESIWGTLVCDAKARQCFFKADE 858
+ + L+C+ K + E
Sbjct: 1025 DCL-EQLICNLKTENQIYDLPE 1045
Score = 138 (53.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 63/237 (26%), Positives = 104/237 (43%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
+F ++DEA+Q+ + PL A + VL+GD QLP +V+S + SLF+RL
Sbjct: 758 DFCIVDEASQISQPICLGPLFFA--DRFVLVGDHQQLPPLVKSAEARELGMSESLFKRLE 815
Query: 645 LLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKS-----YEKHYLPGTEFGP 699
+ L +QYRM+ I N Y ++ ++ S + + K L EF
Sbjct: 816 RNQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRE 875
Query: 700 YTFINIIGGREEFIYHSCRNMVEVSVVIKILQKL-YKAWVGSKQMVSIGVV------SPY 752
I E C E ++ +K W+ +K + + + P
Sbjct: 876 SQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFHLTKLYLKAGCRPS 935
Query: 753 TAQVVA-IRK--KIGSEYENK-DGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG 805
++A R+ K+ S Y N V+V +VD +QG ++ +II+S VR N G +G
Sbjct: 936 DIGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 992
Score = 55 (24.4 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 245 SLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLA 304
S+ LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L
Sbjct: 622 SILRGLNKPQKQAMKRVL--LSKDYTLIV----GMPGTGKTTTICTLVRILYACGFSVLL 675
Query: 305 CTPTNVAITEL 315
+ T+ A+ +
Sbjct: 676 TSYTHSAVDNI 686
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 121 (47.7 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 38/97 (39%), Positives = 61/97 (62%)
Query: 746 IGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNT---GG 802
IGV++ Y AQ+ + KKI ++ DG +++ + D FQG ++ IIIS VR N+ GG
Sbjct: 1361 IGVMTLYRAQL-RLLKKIFNK-NVYDG--LEILTADQFQGRDKKCIIISMVRRNSQLNGG 1416
Query: 803 SIGFISNPQRVNVALTRARHCLWILGNERTLISSESI 839
++ + +RVNVA+TRA+ L I+G++ T+ S I
Sbjct: 1417 AL--LKELRRVNVAMTRAKSKLIIIGSKSTIGSVPEI 1451
Score = 107 (42.7 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 576 LHSVKIEPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASF 635
L ++ + +++++DEA+Q+ + PL+ N +++GD QLP +V++ +
Sbjct: 1172 LFTLNEKDFDYVILDEASQISMPVALGPLRYG--NRFIMVGDHYQLPPLVKNDAARLGGL 1229
Query: 636 GRSLFERLTLLNHSKHL--LDIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYE 688
SLF+ H + + L +QYRM I N Y N++ G N V ++S E
Sbjct: 1230 EESLFKTFCE-KHPESVAELTLQYRMCGDIVTLSNFLIYDNKLKCGNNEVFAQSLE 1284
Score = 54 (24.1 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 245 SLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLA 304
S +TLN Q A+ +R D L G PGTGKT ++ ++ L+ R L
Sbjct: 1047 SKDTTLNLNQKEAIDKVMRAED------YALILGMPGTGKTTVIAEIIKILVSEGKRVLL 1100
Query: 305 CTPTNVAITEL 315
+ T+ A+ +
Sbjct: 1101 TSYTHSAVDNI 1111
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 169 (64.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 67/252 (26%), Positives = 115/252 (45%)
Query: 577 HSVKIEP-LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASF 635
H + ++ +F ++DEA+Q+ + PL + VL+GD QLP +V++ +
Sbjct: 766 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 823
Query: 636 GRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA-----------NVK- 683
SLF+RL ++ L +QYRM+ I N Y ++ G+ N+K
Sbjct: 824 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKM 883
Query: 684 --------SKSYEKHYLPGTEFGPYTFINI--IGGREEFIYHSCRNMVEVSVVIKILQKL 733
SK++ K L + P F+N + E N+ E +V +
Sbjct: 884 LKLEFADASKTWLKEVLEPDK--PVCFLNTEKVPAPEHTEKGGVCNVTEAKLVFFLTTLF 941
Query: 734 YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIII 793
KA G + IG++SPY Q+ I + EN+ V+V ++D +QG ++ III+
Sbjct: 942 IKA--GCRPS-DIGIISPYRHQLKVITDLMARLKENR----VEVNTIDKYQGRDKSIIIV 994
Query: 794 STVRCNTGGSIG 805
S VR + ++G
Sbjct: 995 SFVRNSNDENLG 1006
Score = 60 (26.2 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 246 LSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLAC 305
L +LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L
Sbjct: 640 LKGSLNKPQKQAMKQVL--LSRDYTLIV----GMPGTGKTTTICALVRILSACGFSVLLT 693
Query: 306 TPTNVAITELASRALRLVK 324
+ T+ A+ + L+L K
Sbjct: 694 SFTHTAVDNIL---LKLAK 709
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 19/74 (25%), Positives = 28/74 (37%)
Query: 56 SFVFPLLEETRMQLRSGLEAMRRAPYAEVIAFEELKPYGANRYGIEVDYWRNTIC--NSG 113
SF + + + LRSGL R V+ E P + +C +G
Sbjct: 44 SFRKAMADPSNAALRSGLNNRYRVLEVRVVRGEGRDPEKHLAVSSDPSLGDTELCVLQNG 103
Query: 114 KEPYKTLPGDILVL 127
E +PGDI+ L
Sbjct: 104 WESVPVVPGDIVHL 117
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 157 (60.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 86/335 (25%), Positives = 145/335 (43%)
Query: 514 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL--LKDFCFKRASLFFSTAS 571
F G+ Y + C ++ ++ L+E L K K A + T +
Sbjct: 986 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1044
Query: 572 -SSYKLHS-VKIE-PLNFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQL 621
++ K H VK+ + ++++EAAQ+ E E+ IPL L + ++IGD QL
Sbjct: 1045 HAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQL 1104
Query: 622 PAMVESK-ISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
P ++++ ++ +SLF R + LD Q R S+ NL +R + L
Sbjct: 1105 PPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--G 1159
Query: 681 NVKSKSYEKHYLPGTEFGPYTF--INI-----IGGREEFIYHSCRNMVEVSVVIKILQKL 733
N+ + Y F IN+ +G E Y +N+ E V+ + +
Sbjct: 1160 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1216
Query: 734 YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDII 791
Y +G I +++ Y Q IR I N G KV +VD FQG + D I
Sbjct: 1217 YMCLLGYPAD-KISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYI 1275
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWI 826
++S VR ++G + + +R+ VA++RAR L+I
Sbjct: 1276 LLSLVRTR---AVGHLRDVRRLVVAMSRARLGLYI 1307
Score = 70 (29.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 272 GVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
G+ + GPPGTGKT ++ ++ + RTL T +N A+ +L + + L
Sbjct: 817 GLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMAL 869
Score = 37 (18.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 371 MECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED 410
+E P W F++++D D H Y+ L RE+
Sbjct: 260 LEALLPTRRW---FNTILD---DSHLLVHCYLSSLVHREE 293
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 167 (63.8 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 83/319 (26%), Positives = 144/319 (45%)
Query: 530 CLSVLRNLWNSLDELNL--PCTTSKQLLKDFCFKRASLFFSTAS-SSYKLHSVKIEPLNF 586
C +R ++ L+E + K K A + T + ++ K H + +E L F
Sbjct: 996 CYRHIRKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VE-LGF 1053
Query: 587 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESK-ISDGAS 634
++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ ++
Sbjct: 1054 KYDNILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1113
Query: 635 FGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG 694
+SLF R L LD Q R S+ N ++ Q+ + +V+ + + PG
Sbjct: 1114 MEQSLFTRFVRLGVPTVDLDAQGRARASLCNLYNWRY--KQLGNLPHVQLQPEFRTPNPG 1171
Query: 695 TEFGPYTFINI-----IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVV 749
F + IN+ +G E Y +N+ E + + +Y +G I ++
Sbjct: 1172 FTFD-FQLINVEDFNGVGESEPNPYFY-QNLAEAEYSVALY--MYMRLLGYPAE-RISIL 1226
Query: 750 SPYTAQVVAIRKKIGSEYENKDGF--TVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFI 807
+ Y Q IR I + F KV +VD FQG + D II+S VR ++G +
Sbjct: 1227 TTYNGQKHLIRDVIHQRCASNSFFGQPSKVTTVDRFQGQQNDYIILSLVRTK---AVGHL 1283
Query: 808 SNPQRVNVALTRARHCLWI 826
+ +R+ VA++RAR L+I
Sbjct: 1284 RDVRRLVVAMSRARLGLYI 1302
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 149 (57.5 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 83/321 (25%), Positives = 139/321 (43%)
Query: 530 CLSVLRNLWNSLDELNL--PCTTSKQLLKDFCFKRASLFFSTAS-SSYKLHSVKIEPLNF 586
C L+ ++ L+E + K K A + T + ++ K H + +E L F
Sbjct: 1006 CFRHLKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VE-LGF 1063
Query: 587 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESK-ISDGAS 634
++++E+AQ+ E E+ IPL L + ++IGD QLP ++++ ++
Sbjct: 1064 KYDNILMEESAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1123
Query: 635 FGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPG 694
+SLF R + LD Q R S+ NL +R + L N+ +
Sbjct: 1124 MEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLMPEFRTA 1178
Query: 695 TEFGPYTF--INI-----IGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIG 747
Y F IN+ +G E Y +N+ E V+ + +Y +G I
Sbjct: 1179 NAGFLYDFQLINVEDFNGVGESEPNPYFY-QNLGEAEYVVAVF--MYMCLLGYPAD-RIS 1234
Query: 748 VVSPYTAQVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG 805
+++ Y Q IR I N G KV +VD FQG + D I++S VR G +
Sbjct: 1235 ILTTYNGQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTKAVGHLR 1294
Query: 806 FISNPQRVNVALTRARHCLWI 826
+ +R+ VA++RAR L+I
Sbjct: 1295 --RDVRRLVVAMSRARLGLYI 1313
Score = 72 (30.4 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 272 GVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
G+ + GPPGTGKT ++ +L + RTL T +N A+ +L + + L
Sbjct: 826 GLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMAL 878
Score = 44 (20.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 406 KEREDCNENQSEEKK 420
K +ED NE +SEE K
Sbjct: 770 KRKEDENEEKSEEAK 784
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 137 (53.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 74/290 (25%), Positives = 122/290 (42%)
Query: 552 KQLLKDFCFKRASLFFSTASSSYKLHSVKIE-PLNFLVIDEAAQLKESESTIPLQLAGIN 610
K++ K++ + A + +T S + S+ E + +V+DE + + + L
Sbjct: 304 KEVEKEY-IENAKVIGATLSKC-AIDSLIYERTFDLVVVDEVSMAFVPQIALAASLG--K 359
Query: 611 HAVLIGDECQLP--AMVESKISDGASFGRSLFERLTLL---NHSK-H----LLDIQYRMH 660
V+ GD QLP AM ++ G +F ++ N S+ H +L Q RMH
Sbjct: 360 RIVVCGDFLQLPPIAMANHELVR-KWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMH 418
Query: 661 PSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSCRNM 720
IS F N Y+N++ D +V + P F G + +
Sbjct: 419 ADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSR 478
Query: 721 VEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV----VAIRKKIG-SEYENKDGFTV 775
+ + +Q + + Q SIG+V+PY AQ IR+ + ++Y+N V
Sbjct: 479 FNIMSGLVAMQMMLIGLLDGVQ--SIGIVTPYRAQSRFLSTCIREMLQRTKYQN---IPV 533
Query: 776 KVKSVDGFQGGEEDIIIISTVRCNTGGSIGFI----SNPQRVNVALTRAR 821
+V FQG E D++I TV G + N + VNVA+TRAR
Sbjct: 534 LAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRAR 583
Score = 73 (30.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYK 328
WGPPGTGK+ +S ++ + + L +N A+ L S + +++ K
Sbjct: 171 WGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKK 222
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 137 (53.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 74/290 (25%), Positives = 122/290 (42%)
Query: 552 KQLLKDFCFKRASLFFSTASSSYKLHSVKIE-PLNFLVIDEAAQLKESESTIPLQLAGIN 610
K++ K++ + A + +T S + S+ E + +V+DE + + + L
Sbjct: 304 KEVEKEY-IENAKVIGATLSKC-AIDSLIYERTFDLVVVDEVSMAFVPQIALAASLG--K 359
Query: 611 HAVLIGDECQLP--AMVESKISDGASFGRSLFERLTLL---NHSK-H----LLDIQYRMH 660
V+ GD QLP AM ++ G +F ++ N S+ H +L Q RMH
Sbjct: 360 RIVVCGDFLQLPPIAMANHELVR-KWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMH 418
Query: 661 PSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGGREEFIYHSCRNM 720
IS F N Y+N++ D +V + P F G + +
Sbjct: 419 ADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSR 478
Query: 721 VEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQV----VAIRKKIG-SEYENKDGFTV 775
+ + +Q + + Q SIG+V+PY AQ IR+ + ++Y+N V
Sbjct: 479 FNIMSGLVAMQMMLIGLLDGVQ--SIGIVTPYRAQSRFLSTCIREMLQRTKYQN---IPV 533
Query: 776 KVKSVDGFQGGEEDIIIISTVRCNTGGSIGFI----SNPQRVNVALTRAR 821
+V FQG E D++I TV G + N + VNVA+TRAR
Sbjct: 534 LAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRAR 583
Score = 73 (30.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 277 WGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKESYK 328
WGPPGTGK+ +S ++ + + L +N A+ L S + +++ K
Sbjct: 171 WGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKK 222
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 154 (59.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 65/258 (25%), Positives = 126/258 (48%)
Query: 587 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLTLL 646
+++DEA+ + E +P+ LA N VL+GD QL +V S+ + G S E+L
Sbjct: 823 VIVDEASMVLEP-LLLPV-LATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQ- 879
Query: 647 NHSKHLLDI--QYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEK--HYLPGTEFGPYT 701
+H ++ + QYRM+ IS+ + FY N+++ G +V S ++ Y+ + G
Sbjct: 880 SHPGVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDH 939
Query: 702 FINIIGG--REEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVS-------IGVVSPY 752
+ G ++ ++ ++ + + + + G +++S + V P+
Sbjct: 940 IRKALSGDIKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPH 999
Query: 753 TAQVV-AIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIIS-TVRCNTGGSIGFISNP 810
V+ A R+++ + ++V ++D +QG E+ +II S T N+ + +
Sbjct: 1000 EIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDE 1059
Query: 811 QRVNVALTRARHCLWILG 828
+RVNVALTRAR L ++G
Sbjct: 1060 RRVNVALTRARQKLVVVG 1077
Score = 59 (25.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITELASRALRLVKE-SYKRDSRNNTP 336
G PG+GKT +S+L+ L+ + L T+ A+ + ++ L KE + ++ R +
Sbjct: 708 GLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTK---LTKEVAAEKILRLGSS 764
Query: 337 FCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLME 372
DI K +L+ N EE Y V+++M+
Sbjct: 765 SSIKDDIKKMTLKAKLE-NETSEEYYA--AVRKVMK 797
Score = 49 (22.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 314 ELASRALRLVKESYKRDSRNNTP-FCPLGDILLFGNKDRLKVNPGF---EEIYLDYRVKR 369
E+++ ++ S K +NTP F P GD+ L NK + + GF +E+ D ++ +
Sbjct: 551 EMSNSQKIIISFSRKFLKSSNTPTFRP-GDVCLLSNKKHIAI--GFALIDEVSDDQQIVK 607
Query: 370 L 370
+
Sbjct: 608 I 608
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 486 SLLFQKNVVSEELEKLFSHS---VDEDFSLA--FVGKRYLLQLHQRRSECLSVLRNLWNS 540
+L F + + EL+ FS +++ + L+ F KR L E + N+W+S
Sbjct: 288 ALSFTPSCLDAELQPYFSIICGWINKHYPLSNSFFSKREPLPSKSELLEVYDIEENIWDS 347
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 151 (58.2 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 85/335 (25%), Positives = 145/335 (43%)
Query: 514 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL--LKDFCFKRASLFFSTAS 571
F G+ Y + C ++ ++ L+E L K K A + T +
Sbjct: 964 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1022
Query: 572 -SSYKLHS-VKIE-PLNFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQL 621
++ K H VK+ + ++++EAAQ+ E E+ IPL L + ++IGD QL
Sbjct: 1023 HAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQL 1082
Query: 622 PAMVESK-ISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
P ++++ ++ +SLF R + LD Q R S+ NL +R + L
Sbjct: 1083 PPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--G 1137
Query: 681 NVKSKSYEKHYLPGTEFGPYTF--INI-----IGGREEFIYHSCRNMVEVSVVIKILQKL 733
N+ + Y F IN+ +G E Y +N+ E V+ + +
Sbjct: 1138 NLPHVQLLLEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1194
Query: 734 YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDII 791
Y +G I +++ Y Q IR I + G KV +VD FQG + D I
Sbjct: 1195 YMCLLGYPAD-KISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYI 1253
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWI 826
++S VR ++G + + +R+ VA++RAR L+I
Sbjct: 1254 LLSLVRTR---AVGHLRDVRRLVVAMSRARLGLYI 1285
Score = 70 (29.7 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 272 GVELRWGPPGTGKTKTVSMLLFSLLRI--KCRTLACTPTNVAITELASRALRL 322
G+ + GPPGTGKT ++ ++ + RTL T +N A+ +L + + L
Sbjct: 800 GLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMAL 852
Score = 44 (20.5 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 496 EELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL 544
+ L+K D ++ G +L Q+ R E +S ++N N++ ++
Sbjct: 895 KRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKSNTMPDI 943
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/151 (21%), Positives = 58/151 (38%)
Query: 371 MECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNENQSEEKKCRK-----ET 425
+E P W F++++D D H Y+ L RE+ S+ K E
Sbjct: 260 LEALLPTRRW---FNTILD---DSHVLVHCYLSNLVRREEDGHLFSQLLDMLKFYTGFEI 313
Query: 426 EGSKGECKPFLEYVRESFNCAVIPLRNCIFIFCTHLPKTY-ISENSFQDMVALKSLLDSF 484
G E ++ + L+ F H P+ Y + ++ ++ +SL+ F
Sbjct: 314 NDQTGNALTENEMTTIHYD-RITSLQRAAF---AHFPELYDFALSNVAEVDTRESLVKFF 369
Query: 485 RSLLFQKNVVSEELEKLFSHSVDEDFSLAFV 515
L + +S+ + +V FSLAF+
Sbjct: 370 GPLSYFCTALSDIICCTTILTVKTSFSLAFL 400
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 155 (59.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 69/255 (27%), Positives = 112/255 (43%)
Query: 589 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLF-ERLTLLN 647
IDEA+QL L +L+GD QLP E + A R+ E LTL
Sbjct: 320 IDEASQLALYVLGSLATLLPKTRIILVGDMHQLPPYTEDALP--AELKRAAVGEPLTLAV 377
Query: 648 HSKHLLDIQY-RMHPSISLFPNLQ---FYRNQILDGANVKSKS--YEKHYLPGTEFGPYT 701
+ + R+H + +L FY N + ++ E LP P+
Sbjct: 378 KGRRWSSMHLTRVHRCPKMITDLLGAVFYGNTLTSTRKAVNRVPILEAMELPSHH--PFV 435
Query: 702 FINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRK 761
F+N I + + + S N E ++++ L + VS+ V++ Y AQ +
Sbjct: 436 FVNYISQQTQ-VGKSFSNENEARYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSYVYS 494
Query: 762 KIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRAR 821
I +DG V+V ++DG QG E D+ I+ R + F+ NP R+NVAL+R++
Sbjct: 495 -IA-----EDG--VRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNPNRINVALSRSK 546
Query: 822 HCLWILGNERTLISS 836
++G +R LI +
Sbjct: 547 MATVVIG-QRHLIGN 560
>UNIPROTKB|Q8EA89 [details] [associations]
symbol:SO_4019 "P-loop containing nucleoside triphosphate
hydrolase superfamily" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001261 PROSITE:PS00758 GO:GO:0006508
GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_719549.1 ProteinModelPortal:Q8EA89 GeneID:1171647
KEGG:son:SO_4019 PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 147 (56.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 87/361 (24%), Positives = 165/361 (45%)
Query: 497 ELEKLFSHSVD-EDFSLAFVGKRYL-LQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL 554
EL+KL + ED SL +YL L H R ++ L R+ S ++KQL
Sbjct: 434 ELDKLTALIAQKEDLSL-----KYLQLATHYRLNQLLKHKRSTLVSFASALRARQSAKQL 488
Query: 555 ---LK-DF-CFKRA-SLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAG 608
K DF K+ ++ S+ +S +K+ ++ + + ++IDEA Q + LQ A
Sbjct: 489 DGFYKTDFDALKQTFPIWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAACLPALQRA- 547
Query: 609 INHAVLIGDECQL----------PAMVESKIS---D--GASFGR--SLFERLT--LLNHS 649
A+++GD QL +++++ D G R S+ + ++ L + S
Sbjct: 548 -KAALVVGDSKQLRHFSFLSRAKQTQIQTQLGLAPDCRGLMSYRDASMLDLVSQSLASQS 606
Query: 650 KHL-LDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGG 708
+ + L+ +R P + F N QFY+ + K + + P T G +++ G
Sbjct: 607 QVVFLNEHFRSKPELIQFSNQQFYQGML--------KIMQ--HRPCTSSGHLHRVHVTGS 656
Query: 709 REEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEY- 767
R+ N +E +I+ L +L + SIGV+S + Q + ++I + +
Sbjct: 657 RDS----KGINAIEAEALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFS 712
Query: 768 -ENKDGFTVKVKSVDGFQGGEEDIIIIS-TVRCNTGGSIGFISNPQRVNVALTRARHCLW 825
+ + +++ + GFQG E DI+++S ++ N + +++ NVA+TRA+ W
Sbjct: 713 AQQLERHQLRIATPFGFQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAKQMQW 772
Query: 826 I 826
+
Sbjct: 773 L 773
Score = 61 (26.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 278 GPPGTGKTKTVSMLLFS-LLRIKCRTLACTPTNVAITELASR 318
GPPGTGK+ T++ + +LR K L T+VA+ +A +
Sbjct: 280 GPPGTGKSYTIATVAAEQVLRGKS-VLIVAHTDVAVDVIADK 320
>TIGR_CMR|SO_4019 [details] [associations]
symbol:SO_4019 "hypothetical protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001261
PROSITE:PS00758 GO:GO:0006508 GO:GO:0008237 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_719549.1
ProteinModelPortal:Q8EA89 GeneID:1171647 KEGG:son:SO_4019
PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 147 (56.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 87/361 (24%), Positives = 165/361 (45%)
Query: 497 ELEKLFSHSVD-EDFSLAFVGKRYL-LQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL 554
EL+KL + ED SL +YL L H R ++ L R+ S ++KQL
Sbjct: 434 ELDKLTALIAQKEDLSL-----KYLQLATHYRLNQLLKHKRSTLVSFASALRARQSAKQL 488
Query: 555 ---LK-DF-CFKRA-SLFFSTASSSYKLHSVKIEPLNFLVIDEAAQLKESESTIPLQLAG 608
K DF K+ ++ S+ +S +K+ ++ + + ++IDEA Q + LQ A
Sbjct: 489 DGFYKTDFDALKQTFPIWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAACLPALQRA- 547
Query: 609 INHAVLIGDECQL----------PAMVESKIS---D--GASFGR--SLFERLT--LLNHS 649
A+++GD QL +++++ D G R S+ + ++ L + S
Sbjct: 548 -KAALVVGDSKQLRHFSFLSRAKQTQIQTQLGLAPDCRGLMSYRDASMLDLVSQSLASQS 606
Query: 650 KHL-LDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGTEFGPYTFINIIGG 708
+ + L+ +R P + F N QFY+ + K + + P T G +++ G
Sbjct: 607 QVVFLNEHFRSKPELIQFSNQQFYQGML--------KIMQ--HRPCTSSGHLHRVHVTGS 656
Query: 709 REEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEY- 767
R+ N +E +I+ L +L + SIGV+S + Q + ++I + +
Sbjct: 657 RDS----KGINAIEAEALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFS 712
Query: 768 -ENKDGFTVKVKSVDGFQGGEEDIIIIS-TVRCNTGGSIGFISNPQRVNVALTRARHCLW 825
+ + +++ + GFQG E DI+++S ++ N + +++ NVA+TRA+ W
Sbjct: 713 AQQLERHQLRIATPFGFQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAKQMQW 772
Query: 826 I 826
+
Sbjct: 773 L 773
Score = 61 (26.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 278 GPPGTGKTKTVSMLLFS-LLRIKCRTLACTPTNVAITELASR 318
GPPGTGK+ T++ + +LR K L T+VA+ +A +
Sbjct: 280 GPPGTGKSYTIATVAAEQVLRGKS-VLIVAHTDVAVDVIADK 320
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 150 (57.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 42/139 (30%), Positives = 73/139 (52%)
Query: 692 LPGTEFGPYTFI-NIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVS 750
+PGT G T I ++ E+ N+ E +++ + KA IG+++
Sbjct: 649 MPGT--GKTTTICTLVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSD---IGIIA 703
Query: 751 PYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISN 809
PY Q+ I + G V+V +VD +QG ++ I+++S VR N G++G + +
Sbjct: 704 PYRQQLKIINDLLARSI----GM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKD 758
Query: 810 PQRVNVALTRARHCLWILG 828
+R+NVA+TRA+H L +LG
Sbjct: 759 WRRLNVAITRAKHKLILLG 777
Score = 50 (22.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 250 LNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLL 292
LN+PQ A+ L L D+ V G PGTGKT T+ L+
Sbjct: 626 LNKPQRQAMKKVL--LSKDYTLIV----GMPGTGKTTTICTLV 662
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 417 EEKKCRKETEGSKGECKPFLEYVRESFNCAVIPL 450
EEK C+ ++ G C + V + +C+ +P+
Sbjct: 389 EEKTCKYCSQ--IGNCALYSRAVEQQMDCSSVPI 420
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 107 (42.7 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 33/110 (30%), Positives = 58/110 (52%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
++ +IDEA+ L + S P+ VL+GD QLP +V +K + SLF++L+
Sbjct: 1452 DYCIIDEASILSQPISMGPILKC--KSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLS 1509
Query: 645 LLNHSKHLLDI--QYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKHY 691
+H + ++ QYRM SI N Y N+++ G ++ + S + +Y
Sbjct: 1510 T-SHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNY 1558
Score = 104 (41.7 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 777 VKSVDGFQGGEEDIIIISTVRCNTGGSIG-FISNPQRVNVALTRARHCLWILGNERTL 833
+ ++D FQG ++D IIIS VR N IG I + +R+NVA TRA+ L +G++ +L
Sbjct: 1753 ILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSL 1810
Score = 57 (25.1 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITEL 315
G PGTGKT V L+ L R+ + L + T+ ++ L
Sbjct: 1344 GMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHL 1381
Score = 38 (18.4 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 719 NMVEVSVVIKILQKLY-KAWVGSKQMVSIGVVSPYTAQVVAIRKKI 763
N E ++V + L K + Q IG+++P Q+ I+K I
Sbjct: 1610 NQTEANIVAILTNCLINKLNINQSQ---IGIITPIRFQLNFIKKSI 1652
Score = 37 (18.1 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 466 ISENSFQDMVALKSLLDSFRSLLFQKNVVSEELEK 500
I EN + M LK +DS + K E+ K
Sbjct: 822 IEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSK 856
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 156 (60.0 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 79/275 (28%), Positives = 130/275 (47%)
Query: 585 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFERLT 644
++ ++DEA+Q+ S PL+ A V D+ Q P + RSLF L
Sbjct: 1096 DYCIVDEASQITLPVSLGPLRFAKKFVMVGDHDQLQ-PLVTHPDKRVKQELSRSLFSLLA 1154
Query: 645 LLN-HSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLP-------GTE 696
+ S L QYRM+ I N Y N++ G+ +++ K P G +
Sbjct: 1155 KEHPDSVSHLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQVAQNSLKIPHPEVLNSFIGED 1214
Query: 697 FGPYT-FINIIGGREE---FIYHSCRNMVEVSV---VIK-----ILQKLYKAWV-GSKQM 743
P + +I+ I + F+ + VE +V VI ++Q++ A V G +
Sbjct: 1215 VSPDSQWIHKIFDEKNNVLFLDYDAVPAVEENVGEMVINTKEALLIQQIVNALVHGGVKE 1274
Query: 744 VSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGS 803
IGV+S Y AQ+ ++K + + KD +++ + D +QG +++ IIIS VR N
Sbjct: 1275 DEIGVMSFYRAQLSVLKKNLNNL---KD---LEILTADQYQGRDKECIIISLVRSNERKF 1328
Query: 804 IG-FISNPQRVNVALTRARHCLWILGNERTLISSE 837
G + +R+NVA TRA+ L ILG+ TL ++E
Sbjct: 1329 AGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNE 1363
Score = 58 (25.5 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 278 GPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVAITEL 315
G PGTGKT ++ L+ L+ + L + TN A+ +
Sbjct: 989 GMPGTGKTTVIAQLIKVLVAQRKSVLLTSYTNSAVDNI 1026
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 263 RRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACT 306
++L+C K+ + R+ PGT T+ +++ ++ + CT
Sbjct: 463 QQLNCSRKTVILSRYKFPGTS---TIPIIVGEIVHFIFQECICT 503
Score = 38 (18.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 37 KDQVEKIPESFQSVKQYFGSFVFP 60
KD + + +S + +QY +++ P
Sbjct: 1051 KDYIPEFKDSITTYEQYVNTYMRP 1074
Score = 37 (18.1 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 26 SLENIFNQSLFKDQVEKIPESFQSVKQYFGSFVF 59
S +N+ +++ K+Q+ E +++ GS +F
Sbjct: 560 SKKNLIDETSEKEQIMFAVEEALDIEEEIGSPIF 593
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 146 (56.5 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 62/253 (24%), Positives = 112/253 (44%)
Query: 577 HSVKIEP-LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDGASF 635
H + ++ +F ++DEA+Q+ + PL + VL+GD QLP +V++ +
Sbjct: 717 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 774
Query: 636 GRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKHYLPGT 695
SLF+RL ++ L +QYRM+ I N Y ++ G+ S + LP
Sbjct: 775 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATAN--LPNL 832
Query: 696 EFGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQ 755
+ F + + ++ + ++E + L KA G + IG++SPY Q
Sbjct: 833 KMLKLEFAD---ASKTWL----KEVLEPDKPVCFLNT-EKA--GCRPS-DIGIISPYRHQ 881
Query: 756 VVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNV 815
+ I + EN+ + G + II+ N + + +R+NV
Sbjct: 882 LKVITDLMARLKENRVEVNT-IDKYQGRD--KSIIIVSFVRNSNDENLGALLKDWRRLNV 938
Query: 816 ALTRARHCLWILG 828
A+TRA+H L ++G
Sbjct: 939 AITRAKHKLIMVG 951
Score = 57 (25.1 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 245 SLSSTLNEPQVGAVFACLRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLA 304
S+ LN+PQ A+ L L D+ V G PGTGKT T+ L+ L L
Sbjct: 590 SILKGLNKPQKQAMKQVL--LSRDYTLIV----GMPGTGKTTTICALVRILSACGFSVLL 643
Query: 305 CTPTNVAITELASRALRLVK 324
+ T+ A+ + L+L K
Sbjct: 644 TSFTHTAVDNIL---LKLAK 660
Score = 42 (19.8 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 17/69 (24%), Positives = 26/69 (37%)
Query: 61 LLEETRMQLRSGLEAMRRAPYAEVIAFEELKPYGANRYGIEVDYWRNTIC--NSGKEPYK 118
+ + + LRSGL R V+ E P + +C +G E
Sbjct: 1 MADPSNAALRSGLNNRYRVLEVRVVRGEGRDPEKHLAVSSDPSLGDTELCVLQNGWESVP 60
Query: 119 TLPGDILVL 127
+PGDI+ L
Sbjct: 61 VVPGDIVHL 69
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 47/137 (34%), Positives = 67/137 (48%)
Query: 746 IGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTVR-CNT---- 800
I +++PY AQV I+ + E K+ V V +V QG E +I+STVR C+T
Sbjct: 75 IAILTPYNAQVSEIKMTL----EKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQ 130
Query: 801 -----------GGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESIWGTLVCDAKA 849
G +GF+++ +VNVA+TRA+ L ILGN L E +W L+
Sbjct: 131 AYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLDHYYR 189
Query: 850 RQCFFKADED-RNLAKA 865
+ C D R AKA
Sbjct: 190 KSCVVNPASDIRVKAKA 206
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 157 (60.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 86/335 (25%), Positives = 145/335 (43%)
Query: 514 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL--LKDFCFKRASLFFSTAS 571
F G+ Y + C ++ ++ L+E L K K A + T +
Sbjct: 982 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1040
Query: 572 -SSYKLHS-VKIE-PLNFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQL 621
++ K H VK+ + ++++EAAQ+ E E+ IPL L + ++IGD QL
Sbjct: 1041 HAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQL 1100
Query: 622 PAMVESK-ISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
P ++++ ++ +SLF R + LD Q R S+ NL +R + L
Sbjct: 1101 PPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--G 1155
Query: 681 NVKSKSYEKHYLPGTEFGPYTF--INI-----IGGREEFIYHSCRNMVEVSVVIKILQKL 733
N+ + Y F IN+ +G E Y +N+ E V+ + +
Sbjct: 1156 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1212
Query: 734 YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDII 791
Y +G I +++ Y Q IR I N G KV +VD FQG + D I
Sbjct: 1213 YMCLLGYPAD-KISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYI 1271
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWI 826
++S VR ++G + + +R+ VA++RAR L+I
Sbjct: 1272 LLSLVRTR---AVGHLRDVRRLVVAMSRARLGLYI 1303
Score = 37 (18.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 371 MECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED 410
+E P W F++++D D H Y+ L RE+
Sbjct: 260 LEALLPTRRW---FNTILD---DSHLLVHCYLSSLVHREE 293
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 584 LNFLVIDEAAQLKESESTIP--LQLAGINHAVLIGDECQLPAMVESKISDGASFGRSLFE 641
L++++IDEA+Q + +P L L+ + +++GD QL A + K+ A E
Sbjct: 333 LDYVIIDEASQ----QDIVPGVLALSCAKNLIIVGDRKQL-AHIPEKLGLEAPAPWYDCE 387
Query: 642 RLTLLNHS---------KHLLDIQYRMHPSISLFPNLQFYRNQIL 677
+LL+ LL YR HP I F N QFY NQ++
Sbjct: 388 TYSLLDSCVGVFGDSIPMTLLKEHYRCHPRIIQFCNQQFYDNQLV 432
Score = 74 (31.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 262 LRRLDCDHKSGVELRWGPPGTGKTKTVSMLLFSLLRIKCRTLACTPTNVA 311
L+ ++ S + L GPPGTGKT+T+ ++ ++L ++ +T+A N A
Sbjct: 35 LKAVEQAFSSQISLIEGPPGTGKTQTILNIIANIL-LQGKTVAVVSNNNA 83
Score = 69 (29.3 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 30/140 (21%), Positives = 65/140 (46%)
Query: 687 YEKHYLPGTE-FGPYTFINIIGGREEFIYHSCRNMVEVSVVIKILQKLYKA-WVGSKQMV 744
Y+ +P T+ G + ++ + ++ N+ E+ ++ +L ++ W G
Sbjct: 427 YDNQLVPMTQDAGEQSLTLLVTAKGNHTRNNS-NLRELDSLLAVLDGSGESIWEGEDGR- 484
Query: 745 SIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKSVDGFQGGEEDIIIISTV--RCNTGG 802
G ++P+ Q + +++ N +V FQG E D I+ STV + +
Sbjct: 485 --GFIAPFKNQATLSGSCLPADFIND--------TVHKFQGRECDEIVFSTVLDKHKSPE 534
Query: 803 SIGFISNPQRVNVALTRARH 822
+ F+ + + VNVA++RA++
Sbjct: 535 RLSFVDDARMVNVAVSRAKN 554
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 157 (60.3 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 86/335 (25%), Positives = 145/335 (43%)
Query: 514 FVGKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKQL--LKDFCFKRASLFFSTAS 571
F G+ Y + C ++ ++ L+E L K K A + T +
Sbjct: 982 FKGRSYEEDMEIAEG-CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCT 1040
Query: 572 -SSYKLHS-VKIE-PLNFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQL 621
++ K H VK+ + ++++EAAQ+ E E+ IPL L + ++IGD QL
Sbjct: 1041 HAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQL 1100
Query: 622 PAMVESK-ISDGASFGRSLFERLTLLNHSKHLLDIQYRMHPSISLFPNLQFYRNQILDGA 680
P ++++ ++ +SLF R + LD Q R S+ NL +R + L
Sbjct: 1101 PPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--G 1155
Query: 681 NVKSKSYEKHYLPGTEFGPYTF--INI-----IGGREEFIYHSCRNMVEVSVVIKILQKL 733
N+ + Y F IN+ +G E Y +N+ E V+ + +
Sbjct: 1156 NLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--M 1212
Query: 734 YKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKD--GFTVKVKSVDGFQGGEEDII 791
Y +G I +++ Y Q IR I N G KV +VD FQG + D I
Sbjct: 1213 YMCLLGYPAD-KISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYI 1271
Query: 792 IISTVRCNTGGSIGFISNPQRVNVALTRARHCLWI 826
++S VR ++G + + +R+ VA++RAR L+I
Sbjct: 1272 LLSLVRTR---AVGHLRDVRRLVVAMSRARLGLYI 1303
Score = 41 (19.5 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 496 EELEKLFSHSVDEDFSLAFVGKRYLLQLHQRRSECLSVLRNLWNSLDEL 544
+ L+K D ++ G +L Q+ R E +S ++N ++L ++
Sbjct: 913 KRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDV 961
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 371 MECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED 410
+E P W F++++D D H Y+ L RE+
Sbjct: 260 LEALLPTRRW---FNTILD---DSHLLVHCYLSNLVRREE 293
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1382 1367 0.00088 124 3 11 22 0.37 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 170
No. of states in DFA: 632 (67 KB)
Total size of DFA: 638 KB (2280 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 116.69u 0.10s 116.79t Elapsed: 00:00:05
Total cpu time: 116.75u 0.10s 116.85t Elapsed: 00:00:05
Start: Sat May 11 12:13:30 2013 End: Sat May 11 12:13:35 2013
WARNINGS ISSUED: 1