Query 048654
Match_columns 723
No_of_seqs 690 out of 2969
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 11:42:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048654.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048654hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0488 Uup ATPase components 100.0 5.2E-90 1.1E-94 776.6 56.4 518 164-713 2-527 (530)
2 KOG0066 eIF2-interacting prote 100.0 3.1E-90 6.7E-95 723.7 39.5 539 158-718 257-798 (807)
3 PLN03073 ABC transporter F fam 100.0 3.4E-85 7.4E-90 767.4 68.3 532 160-713 172-716 (718)
4 PRK10636 putative ABC transpor 100.0 4.9E-85 1.1E-89 763.0 63.8 511 165-712 1-518 (638)
5 KOG0927 Predicted transporter 100.0 4.5E-86 9.7E-91 713.6 44.6 538 155-721 65-606 (614)
6 PRK11147 ABC transporter ATPas 100.0 6.2E-82 1.3E-86 738.1 63.0 517 164-711 2-528 (635)
7 KOG0062 ATPase component of AB 100.0 2.6E-84 5.5E-89 696.6 34.8 500 162-720 77-578 (582)
8 PRK15064 ABC transporter ATP-b 100.0 7.6E-80 1.7E-84 707.9 64.3 519 165-712 1-526 (530)
9 PRK11819 putative ABC transpor 100.0 1.3E-78 2.9E-83 700.7 65.0 520 164-713 5-535 (556)
10 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.9E-78 1.1E-82 695.6 65.6 520 165-714 4-534 (552)
11 COG1123 ATPase components of v 100.0 3.3E-78 7.2E-83 668.5 47.4 473 165-709 5-517 (539)
12 PRK13549 xylose transporter AT 100.0 8E-77 1.7E-81 679.3 46.2 459 164-709 4-492 (506)
13 TIGR03269 met_CoM_red_A2 methy 100.0 4.8E-76 1E-80 675.2 49.8 462 166-712 1-518 (520)
14 PRK15134 microcin C ABC transp 100.0 7.8E-76 1.7E-80 674.6 48.8 465 164-710 4-514 (529)
15 PRK10261 glutathione transport 100.0 3.3E-75 7.2E-80 679.6 49.1 499 163-710 10-552 (623)
16 TIGR02633 xylG D-xylose ABC tr 100.0 1.9E-75 4.1E-80 667.3 45.9 459 165-709 1-490 (500)
17 PRK09700 D-allose transporter 100.0 5E-75 1.1E-79 665.2 45.6 450 164-702 4-490 (510)
18 PRK15439 autoinducer 2 ABC tra 100.0 8.5E-75 1.8E-79 662.7 42.8 454 165-710 11-491 (510)
19 PRK10762 D-ribose transporter 100.0 4.1E-74 8.8E-79 656.2 45.0 449 165-709 4-482 (501)
20 PRK10938 putative molybdenum t 100.0 4.9E-74 1.1E-78 654.2 45.4 455 165-702 3-484 (490)
21 PRK11288 araG L-arabinose tran 100.0 7.5E-74 1.6E-78 654.0 45.4 453 164-710 3-484 (501)
22 PRK10982 galactose/methyl gala 100.0 1.5E-73 3.3E-78 650.1 44.2 449 168-710 1-479 (491)
23 COG4172 ABC-type uncharacteriz 100.0 1.5E-71 3.2E-76 581.9 39.7 466 163-710 4-515 (534)
24 PRK13409 putative ATPase RIL; 100.0 7.4E-68 1.6E-72 610.8 48.4 440 170-701 78-533 (590)
25 COG1129 MglA ABC-type sugar tr 100.0 5.4E-66 1.2E-70 568.0 37.4 443 163-701 6-481 (500)
26 KOG0055 Multidrug/pheromone ex 100.0 6.6E-63 1.4E-67 580.9 43.9 247 132-407 321-576 (1228)
27 COG3845 ABC-type uncharacteriz 100.0 1.4E-60 3.1E-65 514.5 40.6 454 165-708 4-489 (501)
28 TIGR01257 rim_protein retinal- 100.0 1.2E-56 2.5E-61 560.5 57.5 211 494-713 1936-2161(2272)
29 PLN03130 ABC transporter C fam 100.0 5.5E-57 1.2E-61 568.5 51.3 202 494-711 1236-1461(1622)
30 PLN03232 ABC transporter C fam 100.0 3.8E-57 8.2E-62 569.5 49.3 202 495-711 1234-1458(1495)
31 PTZ00265 multidrug resistance 100.0 3.3E-56 7.1E-61 556.6 53.1 204 495-711 1165-1452(1466)
32 TIGR00957 MRP_assoc_pro multi 100.0 7.5E-56 1.6E-60 558.5 52.5 204 494-712 1283-1509(1522)
33 PTZ00243 ABC transporter; Prov 100.0 4.7E-54 1E-58 541.1 51.7 202 495-711 1308-1533(1560)
34 TIGR01271 CFTR_protein cystic 100.0 8.9E-53 1.9E-57 529.2 50.3 202 494-711 1216-1440(1490)
35 TIGR00956 3a01205 Pleiotropic 100.0 8.1E-53 1.7E-57 525.7 48.9 204 495-706 759-988 (1394)
36 PLN03140 ABC transporter G fam 100.0 3.9E-51 8.4E-56 509.0 42.5 205 495-706 867-1105(1470)
37 KOG0054 Multidrug resistance-a 100.0 6.2E-50 1.4E-54 481.7 44.2 205 491-711 1134-1362(1381)
38 COG1245 Predicted ATPase, RNas 100.0 6.8E-49 1.5E-53 416.8 32.9 423 188-695 97-530 (591)
39 COG1126 GlnQ ABC-type polar am 100.0 8.1E-48 1.8E-52 376.9 24.6 221 165-407 2-225 (240)
40 COG1126 GlnQ ABC-type polar am 100.0 1.5E-47 3.3E-52 374.9 20.6 208 494-711 1-225 (240)
41 COG1120 FepC ABC-type cobalami 100.0 4.8E-45 1E-49 374.2 23.4 212 495-718 2-236 (258)
42 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.6E-44 3.6E-49 368.4 24.1 209 493-711 2-227 (254)
43 COG1125 OpuBA ABC-type proline 100.0 3.7E-44 8E-49 357.6 20.7 218 165-406 1-224 (309)
44 COG1135 AbcC ABC-type metal io 100.0 1.3E-43 2.7E-48 363.8 23.4 220 165-405 1-229 (339)
45 COG1120 FepC ABC-type cobalami 100.0 1.5E-43 3.2E-48 363.3 21.5 222 165-406 2-227 (258)
46 COG1127 Ttg2A ABC-type transpo 100.0 1.2E-43 2.6E-48 352.6 20.1 210 493-711 6-235 (263)
47 PRK00349 uvrA excinuclease ABC 100.0 2.9E-42 6.2E-47 410.8 34.6 336 297-711 467-927 (943)
48 COG3638 ABC-type phosphate/pho 100.0 1E-43 2.3E-48 352.2 18.2 217 494-719 2-245 (258)
49 COG1135 AbcC ABC-type metal io 100.0 1.4E-43 3.1E-48 363.4 19.7 207 495-710 1-230 (339)
50 COG1127 Ttg2A ABC-type transpo 100.0 6.5E-43 1.4E-47 347.4 22.7 226 163-407 6-235 (263)
51 PRK00635 excinuclease ABC subu 100.0 7.7E-42 1.7E-46 421.6 36.3 330 303-711 459-906 (1809)
52 COG1116 TauB ABC-type nitrate/ 100.0 1E-42 2.2E-47 350.8 23.3 196 494-699 2-211 (248)
53 COG1125 OpuBA ABC-type proline 100.0 2.5E-43 5.5E-48 351.6 17.6 204 495-711 1-225 (309)
54 COG1124 DppF ABC-type dipeptid 100.0 9.7E-43 2.1E-47 347.8 20.9 203 494-702 2-223 (252)
55 COG1136 SalX ABC-type antimicr 100.0 4.2E-42 9E-47 346.1 22.5 198 495-700 1-221 (226)
56 COG1124 DppF ABC-type dipeptid 100.0 2.5E-42 5.4E-47 344.9 19.7 219 164-405 2-229 (252)
57 COG1116 TauB ABC-type nitrate/ 100.0 2.9E-42 6.4E-47 347.4 20.1 200 165-393 3-207 (248)
58 TIGR00630 uvra excinuclease AB 100.0 7.6E-41 1.7E-45 397.9 35.2 330 302-709 469-923 (924)
59 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.7E-42 2.1E-46 348.1 22.2 219 164-407 3-227 (254)
60 COG3638 ABC-type phosphate/pho 100.0 9.2E-42 2E-46 338.3 20.9 222 164-405 2-235 (258)
61 COG1122 CbiO ABC-type cobalt t 100.0 1.8E-41 4E-46 347.2 23.8 209 494-712 2-229 (235)
62 COG2884 FtsE Predicted ATPase 100.0 1.5E-41 3.3E-46 325.7 18.0 200 495-703 1-219 (223)
63 COG3842 PotA ABC-type spermidi 100.0 2.7E-41 5.9E-46 360.8 19.8 209 493-711 3-226 (352)
64 COG1136 SalX ABC-type antimicr 100.0 1.7E-40 3.6E-45 334.5 23.7 212 165-396 1-221 (226)
65 COG1117 PstB ABC-type phosphat 100.0 1.2E-40 2.7E-45 324.9 20.1 223 164-406 6-236 (253)
66 COG1131 CcmA ABC-type multidru 100.0 1.9E-40 4.1E-45 352.7 23.1 209 494-712 3-227 (293)
67 COG3842 PotA ABC-type spermidi 100.0 8.6E-41 1.9E-45 356.9 20.2 218 164-407 4-226 (352)
68 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-40 2.4E-45 341.3 19.4 207 495-710 2-226 (345)
69 PRK13537 nodulation ABC transp 100.0 5.9E-40 1.3E-44 351.6 25.4 210 492-712 4-228 (306)
70 TIGR02314 ABC_MetN D-methionin 100.0 5.4E-40 1.2E-44 355.7 24.6 207 495-710 1-229 (343)
71 cd03261 ABC_Org_Solvent_Resist 100.0 5.2E-40 1.1E-44 339.3 23.0 205 496-710 1-225 (235)
72 COG1122 CbiO ABC-type cobalt t 100.0 4E-40 8.8E-45 337.3 21.1 221 164-406 2-227 (235)
73 TIGR00960 3a0501s02 Type II (G 100.0 6.4E-40 1.4E-44 334.3 22.3 197 495-699 1-216 (216)
74 PRK13536 nodulation factor exp 100.0 1.2E-39 2.6E-44 353.3 25.5 211 491-712 37-262 (340)
75 COG3839 MalK ABC-type sugar tr 100.0 4E-40 8.7E-45 350.0 21.3 206 495-711 3-223 (338)
76 COG4555 NatA ABC-type Na+ tran 100.0 2.7E-40 5.8E-45 319.6 18.0 216 165-405 1-220 (245)
77 TIGR02314 ABC_MetN D-methionin 100.0 1.7E-39 3.7E-44 351.8 26.3 220 165-405 1-228 (343)
78 cd03261 ABC_Org_Solvent_Resist 100.0 2E-39 4.2E-44 335.1 25.6 220 166-405 1-224 (235)
79 PRK00635 excinuclease ABC subu 100.0 3.8E-38 8.2E-43 389.0 41.3 185 295-543 785-981 (1809)
80 COG1131 CcmA ABC-type multidru 100.0 1.8E-39 3.9E-44 345.2 25.4 216 165-405 4-224 (293)
81 COG1118 CysA ABC-type sulfate/ 100.0 1.8E-40 3.9E-45 339.7 16.3 218 165-405 2-225 (345)
82 TIGR01288 nodI ATP-binding ABC 100.0 2.3E-39 5E-44 347.0 24.6 207 494-711 3-224 (303)
83 TIGR00960 3a0501s02 Type II (G 100.0 4.3E-39 9.3E-44 328.2 24.7 211 165-395 1-216 (216)
84 PRK13537 nodulation ABC transp 100.0 4.3E-39 9.4E-44 345.0 25.8 216 165-405 7-225 (306)
85 cd03226 ABC_cobalt_CbiO_domain 100.0 3E-39 6.4E-44 326.9 22.6 194 497-700 1-205 (205)
86 cd03265 ABC_DrrA DrrA is the A 100.0 2.2E-39 4.7E-44 331.4 21.7 202 496-708 1-218 (220)
87 COG3839 MalK ABC-type sugar tr 100.0 1.4E-39 3E-44 346.0 20.8 215 164-405 2-221 (338)
88 cd03259 ABC_Carb_Solutes_like 100.0 3.3E-39 7.2E-44 328.4 22.4 196 496-701 1-211 (213)
89 COG2884 FtsE Predicted ATPase 100.0 1E-39 2.2E-44 313.2 17.3 213 165-398 1-218 (223)
90 PRK11650 ugpC glycerol-3-phosp 100.0 3.7E-39 8.1E-44 351.5 24.2 206 495-711 3-224 (356)
91 PRK13651 cobalt transporter AT 100.0 5.1E-39 1.1E-43 344.0 24.8 208 495-710 2-253 (305)
92 PRK15079 oligopeptide ABC tran 100.0 5.2E-39 1.1E-43 347.3 25.1 213 492-710 5-250 (331)
93 PRK11432 fbpC ferric transport 100.0 5E-39 1.1E-43 349.6 24.7 208 493-711 4-226 (351)
94 PRK13634 cbiO cobalt transport 100.0 4.8E-39 1E-43 342.4 23.8 207 496-710 3-234 (290)
95 COG4555 NatA ABC-type Na+ tran 100.0 6.2E-40 1.3E-44 317.1 15.4 208 495-712 1-223 (245)
96 PRK11153 metN DL-methionine tr 100.0 6E-39 1.3E-43 349.0 24.9 207 495-710 1-229 (343)
97 PRK11831 putative ABC transpor 100.0 5E-39 1.1E-43 338.8 23.5 209 493-711 5-233 (269)
98 PRK13643 cbiO cobalt transport 100.0 6.1E-39 1.3E-43 341.2 24.2 208 495-710 1-232 (288)
99 COG0488 Uup ATPase components 100.0 5E-39 1.1E-43 363.1 24.9 211 494-713 2-242 (530)
100 PRK13637 cbiO cobalt transport 100.0 7.5E-39 1.6E-43 340.4 24.8 209 495-711 2-234 (287)
101 TIGR03265 PhnT2 putative 2-ami 100.0 6.1E-39 1.3E-43 349.5 24.6 207 494-711 3-224 (353)
102 COG4598 HisP ABC-type histidin 100.0 1.7E-39 3.8E-44 308.0 17.2 232 164-406 5-240 (256)
103 PRK13536 nodulation factor exp 100.0 1E-38 2.2E-43 346.0 25.8 217 164-405 40-259 (340)
104 TIGR02315 ABC_phnC phosphonate 100.0 1.2E-38 2.7E-43 330.6 24.8 210 495-712 1-236 (243)
105 PRK13631 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 342.8 25.8 211 492-710 18-264 (320)
106 PRK09536 btuD corrinoid ABC tr 100.0 5.5E-39 1.2E-43 353.8 23.3 207 494-710 2-227 (402)
107 PRK15112 antimicrobial peptide 100.0 1.2E-38 2.6E-43 335.6 24.7 213 493-711 2-239 (267)
108 COG0411 LivG ABC-type branched 100.0 1.1E-39 2.4E-44 326.2 15.9 210 493-711 2-239 (250)
109 PRK13641 cbiO cobalt transport 100.0 9.9E-39 2.1E-43 339.6 24.1 208 495-710 2-233 (287)
110 COG0411 LivG ABC-type branched 100.0 4.8E-40 1.1E-44 328.8 13.2 227 164-407 3-239 (250)
111 PRK11308 dppF dipeptide transp 100.0 1.4E-38 3.1E-43 343.6 25.5 211 493-710 3-243 (327)
112 cd03257 ABC_NikE_OppD_transpor 100.0 1.2E-38 2.5E-43 327.4 23.5 201 495-701 1-226 (228)
113 PRK13647 cbiO cobalt transport 100.0 9.8E-39 2.1E-43 337.4 23.5 206 494-709 3-225 (274)
114 cd03296 ABC_CysA_sulfate_impor 100.0 1.1E-38 2.5E-43 330.3 23.5 206 495-710 2-225 (239)
115 PRK11247 ssuB aliphatic sulfon 100.0 1.9E-38 4.1E-43 331.9 25.2 195 493-701 10-214 (257)
116 cd03256 ABC_PhnC_transporter A 100.0 1.9E-38 4E-43 328.7 24.9 209 496-712 1-235 (241)
117 COG1117 PstB ABC-type phosphat 100.0 1.8E-39 3.8E-44 316.9 16.0 207 493-709 5-235 (253)
118 PRK10619 histidine/lysine/argi 100.0 1.4E-38 3E-43 333.2 24.1 209 493-710 3-240 (257)
119 cd03263 ABC_subfamily_A The AB 100.0 1E-38 2.2E-43 326.3 22.4 205 496-709 1-219 (220)
120 PRK11432 fbpC ferric transport 100.0 1.8E-38 3.8E-43 345.4 25.6 217 163-405 4-224 (351)
121 PRK11629 lolD lipoprotein tran 100.0 2.2E-38 4.8E-43 326.8 24.9 200 493-701 3-225 (233)
122 PRK11701 phnK phosphonate C-P 100.0 2.8E-38 6E-43 331.1 25.6 209 493-710 4-240 (258)
123 PRK11000 maltose/maltodextrin 100.0 1.4E-38 3.1E-43 348.9 24.5 206 495-711 3-223 (369)
124 PRK13646 cbiO cobalt transport 100.0 1.4E-38 3E-43 338.2 23.6 209 495-711 2-235 (286)
125 cd03219 ABC_Mj1267_LivG_branch 100.0 1.3E-38 2.9E-43 328.9 22.6 205 496-710 1-231 (236)
126 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-38 3.7E-43 346.4 24.6 215 165-405 3-222 (356)
127 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1E-38 2.2E-43 325.8 21.5 195 496-699 1-218 (218)
128 PRK11831 putative ABC transpor 100.0 3.1E-38 6.6E-43 332.8 25.7 223 164-406 6-232 (269)
129 TIGR03522 GldA_ABC_ATP gliding 100.0 2.1E-38 4.6E-43 339.2 24.8 206 495-711 2-221 (301)
130 PRK11022 dppD dipeptide transp 100.0 2.7E-38 5.8E-43 341.5 25.7 226 165-405 3-241 (326)
131 PRK11264 putative amino-acid A 100.0 1.7E-38 3.7E-43 331.0 23.3 206 495-710 3-232 (250)
132 TIGR02769 nickel_nikE nickel i 100.0 2.6E-38 5.6E-43 332.7 24.8 209 495-710 2-239 (265)
133 cd03301 ABC_MalK_N The N-termi 100.0 1.8E-38 3.9E-43 322.8 22.8 197 496-702 1-212 (213)
134 cd03266 ABC_NatA_sodium_export 100.0 1.7E-38 3.6E-43 324.2 22.6 199 495-701 1-216 (218)
135 PRK09452 potA putrescine/sperm 100.0 2.1E-38 4.6E-43 347.1 24.9 209 492-711 11-234 (375)
136 TIGR01288 nodI ATP-binding ABC 100.0 2.8E-38 6E-43 338.6 25.3 216 165-405 4-222 (303)
137 cd03259 ABC_Carb_Solutes_like 100.0 1.5E-38 3.3E-43 323.4 22.1 207 166-397 1-211 (213)
138 cd03260 ABC_PstB_phosphate_tra 100.0 1.2E-38 2.6E-43 327.4 21.4 204 496-708 1-226 (227)
139 TIGR03258 PhnT 2-aminoethylpho 100.0 1.9E-38 4.1E-43 346.3 24.0 206 495-711 5-228 (362)
140 PRK13638 cbiO cobalt transport 100.0 1.8E-38 4E-43 334.9 23.2 205 495-710 1-224 (271)
141 PRK10636 putative ABC transpor 100.0 2.7E-38 5.9E-43 369.8 26.9 210 495-711 1-236 (638)
142 PRK13636 cbiO cobalt transport 100.0 2.7E-38 5.8E-43 335.6 24.4 210 493-711 3-231 (283)
143 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.5E-38 5.4E-43 323.6 23.4 198 496-701 1-214 (220)
144 cd03265 ABC_DrrA DrrA is the A 100.0 1.2E-38 2.5E-43 326.0 20.9 212 166-402 1-216 (220)
145 TIGR03265 PhnT2 putative 2-ami 100.0 3.3E-38 7.1E-43 343.7 25.7 216 164-405 3-222 (353)
146 PRK10851 sulfate/thiosulfate t 100.0 2.2E-38 4.8E-43 345.1 24.3 207 495-711 2-226 (353)
147 PRK11308 dppF dipeptide transp 100.0 4.6E-38 1E-42 339.6 26.2 225 164-405 4-242 (327)
148 cd03258 ABC_MetN_methionine_tr 100.0 2.9E-38 6.2E-43 325.9 23.5 206 495-709 1-228 (233)
149 cd03260 ABC_PstB_phosphate_tra 100.0 1.9E-38 4.1E-43 325.9 21.9 216 166-402 1-224 (227)
150 cd03218 ABC_YhbG The ABC trans 100.0 1.9E-38 4.1E-43 326.9 21.8 204 496-710 1-221 (232)
151 PRK15079 oligopeptide ABC tran 100.0 6E-38 1.3E-42 339.1 26.7 226 163-405 6-249 (331)
152 TIGR02323 CP_lyasePhnK phospho 100.0 3.8E-38 8.3E-43 329.0 24.3 208 494-710 2-237 (253)
153 cd03235 ABC_Metallic_Cations A 100.0 1.2E-38 2.7E-43 324.1 20.1 194 498-699 2-210 (213)
154 PRK11153 metN DL-methionine tr 100.0 5E-38 1.1E-42 341.8 26.2 220 165-405 1-228 (343)
155 PRK09544 znuC high-affinity zi 100.0 3.8E-38 8.1E-43 328.7 24.0 202 494-710 3-208 (251)
156 PRK13649 cbiO cobalt transport 100.0 3.5E-38 7.5E-43 334.3 24.1 209 495-711 2-234 (280)
157 PRK10619 histidine/lysine/argi 100.0 6.3E-38 1.4E-42 328.2 25.7 231 165-405 5-239 (257)
158 TIGR03522 GldA_ABC_ATP gliding 100.0 6.1E-38 1.3E-42 335.6 26.1 216 165-405 2-219 (301)
159 TIGR02673 FtsE cell division A 100.0 2.6E-38 5.5E-43 322.0 21.9 195 495-698 1-214 (214)
160 PRK11022 dppD dipeptide transp 100.0 3.4E-38 7.5E-43 340.6 24.1 209 495-710 3-242 (326)
161 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.4E-38 9.6E-43 325.2 23.9 206 495-712 1-222 (236)
162 cd03269 ABC_putative_ATPase Th 100.0 3.2E-38 6.9E-43 320.4 22.4 196 496-701 1-208 (210)
163 PRK09493 glnQ glutamine ABC tr 100.0 3.4E-38 7.4E-43 326.8 23.0 207 495-711 1-225 (240)
164 TIGR02211 LolD_lipo_ex lipopro 100.0 3.9E-38 8.5E-43 322.2 23.1 197 495-700 1-220 (221)
165 PRK09536 btuD corrinoid ABC tr 100.0 4.4E-38 9.5E-43 346.7 25.2 219 164-405 2-226 (402)
166 TIGR03410 urea_trans_UrtE urea 100.0 3E-38 6.5E-43 325.1 22.3 207 496-716 1-226 (230)
167 PRK10575 iron-hydroxamate tran 100.0 2.6E-38 5.6E-43 332.7 22.3 211 492-711 8-237 (265)
168 PRK09493 glnQ glutamine ABC tr 100.0 9.6E-38 2.1E-42 323.5 26.2 220 165-405 1-223 (240)
169 cd03225 ABC_cobalt_CbiO_domain 100.0 1.7E-38 3.6E-43 322.7 20.0 194 497-698 1-211 (211)
170 TIGR03258 PhnT 2-aminoethylpho 100.0 5.3E-38 1.2E-42 342.7 25.4 218 165-406 5-227 (362)
171 cd03268 ABC_BcrA_bacitracin_re 100.0 3.2E-38 6.9E-43 320.0 21.9 192 496-701 1-206 (208)
172 PRK11264 putative amino-acid A 100.0 9.5E-38 2.1E-42 325.4 25.9 226 165-405 3-231 (250)
173 PRK11248 tauB taurine transpor 100.0 4.8E-38 1E-42 328.7 23.7 197 495-701 1-211 (255)
174 TIGR02673 FtsE cell division A 100.0 5.3E-38 1.1E-42 319.7 23.3 210 165-394 1-214 (214)
175 PRK11607 potG putrescine trans 100.0 5.2E-38 1.1E-42 344.6 24.8 208 493-711 17-239 (377)
176 cd03258 ABC_MetN_methionine_tr 100.0 9.2E-38 2E-42 322.1 25.3 220 165-405 1-228 (233)
177 PRK14250 phosphate ABC transpo 100.0 5.2E-38 1.1E-42 325.8 23.5 202 495-709 3-219 (241)
178 COG0444 DppD ABC-type dipeptid 100.0 5.1E-38 1.1E-42 327.0 23.2 225 166-406 2-242 (316)
179 TIGR00972 3a0107s01c2 phosphat 100.0 1.3E-37 2.9E-42 323.8 26.4 221 165-405 1-230 (247)
180 cd03264 ABC_drug_resistance_li 100.0 3.7E-38 7.9E-43 320.2 21.7 195 496-701 1-209 (211)
181 PRK10851 sulfate/thiosulfate t 100.0 6.3E-38 1.4E-42 341.5 25.0 216 165-405 2-224 (353)
182 PRK10908 cell division protein 100.0 5.7E-38 1.2E-42 321.4 23.2 198 495-701 1-217 (222)
183 PRK13650 cbiO cobalt transport 100.0 5.2E-38 1.1E-42 332.7 23.7 207 494-710 3-228 (279)
184 PRK09984 phosphonate/organopho 100.0 5.8E-38 1.3E-42 329.4 23.7 216 493-717 2-248 (262)
185 cd03256 ABC_PhnC_transporter A 100.0 1.1E-37 2.4E-42 322.9 25.6 220 166-405 1-232 (241)
186 PRK10895 lipopolysaccharide AB 100.0 3.9E-38 8.5E-43 326.6 22.0 207 495-711 3-226 (241)
187 PRK11000 maltose/maltodextrin 100.0 7.3E-38 1.6E-42 343.4 25.3 215 165-405 3-221 (369)
188 PRK10584 putative ABC transpor 100.0 8.6E-38 1.9E-42 321.3 24.3 200 493-701 4-226 (228)
189 PRK11300 livG leucine/isoleuci 100.0 6.4E-38 1.4E-42 327.6 23.7 210 493-711 3-243 (255)
190 cd03219 ABC_Mj1267_LivG_branch 100.0 6.6E-38 1.4E-42 323.7 23.5 218 166-405 1-230 (236)
191 PRK13643 cbiO cobalt transport 100.0 1.1E-37 2.4E-42 331.6 25.8 224 165-406 1-232 (288)
192 PRK13635 cbiO cobalt transport 100.0 5.9E-38 1.3E-42 332.2 23.7 208 493-710 3-228 (279)
193 cd03296 ABC_CysA_sulfate_impor 100.0 7.1E-38 1.5E-42 324.3 23.7 215 165-405 2-224 (239)
194 PRK13652 cbiO cobalt transport 100.0 7.2E-38 1.6E-42 331.3 24.2 208 494-711 2-227 (277)
195 cd03224 ABC_TM1139_LivF_branch 100.0 5.8E-38 1.3E-42 321.0 22.6 202 496-710 1-220 (222)
196 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.8E-38 1.2E-42 320.3 22.5 210 166-395 1-218 (218)
197 PRK11819 putative ABC transpor 100.0 8E-38 1.7E-42 361.4 26.5 212 492-711 3-250 (556)
198 COG1137 YhbG ABC-type (unclass 100.0 1.9E-39 4.1E-44 313.4 10.7 209 494-711 3-228 (243)
199 PRK15093 antimicrobial peptide 100.0 9E-38 2E-42 338.2 25.1 211 494-710 2-247 (330)
200 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.6E-38 1.7E-42 324.7 23.5 206 496-710 1-224 (242)
201 cd03262 ABC_HisP_GlnQ_permease 100.0 9E-38 2E-42 317.6 23.5 210 166-395 1-213 (213)
202 TIGR02315 ABC_phnC phosphonate 100.0 1E-37 2.2E-42 323.8 24.3 221 165-405 1-233 (243)
203 COG0410 LivF ABC-type branched 100.0 3.7E-38 8E-43 313.0 20.0 208 494-712 2-227 (237)
204 PRK14242 phosphate transporter 100.0 9.5E-38 2.1E-42 326.1 24.2 209 493-710 4-236 (253)
205 cd03292 ABC_FtsE_transporter F 100.0 4.7E-38 1E-42 319.9 21.3 195 496-699 1-214 (214)
206 PRK09473 oppD oligopeptide tra 100.0 1.3E-37 2.8E-42 336.5 25.9 212 492-710 9-250 (330)
207 PRK13637 cbiO cobalt transport 100.0 1.6E-37 3.4E-42 330.3 26.0 222 165-406 2-233 (287)
208 PRK14247 phosphate ABC transpo 100.0 1.6E-37 3.6E-42 323.7 25.7 221 164-405 2-232 (250)
209 PRK13634 cbiO cobalt transport 100.0 1.6E-37 3.4E-42 330.7 25.9 223 165-406 2-234 (290)
210 PRK13646 cbiO cobalt transport 100.0 1.8E-37 3.8E-42 329.8 26.2 224 165-406 2-234 (286)
211 PRK13645 cbiO cobalt transport 100.0 9.1E-38 2E-42 332.6 24.1 209 494-710 5-239 (289)
212 TIGR01188 drrA daunorubicin re 100.0 4.6E-38 9.9E-43 336.8 21.8 198 504-712 2-214 (302)
213 PRK15093 antimicrobial peptide 100.0 1.8E-37 3.9E-42 335.8 26.6 227 164-405 2-246 (330)
214 PRK10908 cell division protein 100.0 1.9E-37 4E-42 317.6 25.3 213 165-397 1-217 (222)
215 PRK13639 cbiO cobalt transport 100.0 1E-37 2.3E-42 329.8 24.2 206 495-710 1-225 (275)
216 cd03301 ABC_MalK_N The N-termi 100.0 3.3E-38 7.2E-43 320.9 19.5 208 166-398 1-212 (213)
217 cd03292 ABC_FtsE_transporter F 100.0 1.3E-37 2.9E-42 316.6 23.9 210 166-395 1-214 (214)
218 TIGR01978 sufC FeS assembly AT 100.0 1.7E-37 3.7E-42 321.9 25.2 221 166-405 1-232 (243)
219 PRK15064 ABC transporter ATP-b 100.0 8.6E-38 1.9E-42 359.5 25.4 210 495-711 1-242 (530)
220 PRK14273 phosphate ABC transpo 100.0 1.9E-37 4E-42 324.1 25.5 225 162-405 4-236 (254)
221 cd03262 ABC_HisP_GlnQ_permease 100.0 5E-38 1.1E-42 319.5 20.7 195 496-699 1-213 (213)
222 PRK09452 potA putrescine/sperm 100.0 1.4E-37 3.1E-42 340.6 25.7 217 163-405 12-232 (375)
223 PRK13548 hmuV hemin importer A 100.0 1.3E-37 2.8E-42 326.1 24.2 206 495-711 2-230 (258)
224 TIGR03411 urea_trans_UrtD urea 100.0 2.3E-37 5E-42 321.0 25.8 208 494-711 1-231 (242)
225 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.9E-38 1.3E-42 325.5 21.4 217 166-405 1-223 (242)
226 TIGR00972 3a0107s01c2 phosphat 100.0 1.5E-37 3.3E-42 323.4 24.5 208 495-711 1-232 (247)
227 PRK11124 artP arginine transpo 100.0 1.1E-37 2.4E-42 323.4 23.4 206 495-710 2-229 (242)
228 PRK14250 phosphate ABC transpo 100.0 8.5E-38 1.8E-42 324.2 22.2 214 164-405 2-219 (241)
229 PRK14245 phosphate ABC transpo 100.0 3.1E-37 6.7E-42 321.7 26.5 223 164-406 2-233 (250)
230 cd03266 ABC_NatA_sodium_export 100.0 1.1E-37 2.5E-42 318.1 22.8 209 165-397 1-216 (218)
231 cd03225 ABC_cobalt_CbiO_domain 100.0 1.1E-37 2.4E-42 316.6 22.5 206 167-394 1-211 (211)
232 cd03263 ABC_subfamily_A The AB 100.0 1.5E-37 3.2E-42 317.7 23.6 213 166-403 1-217 (220)
233 TIGR02769 nickel_nikE nickel i 100.0 2.2E-37 4.8E-42 325.6 25.6 224 165-405 2-238 (265)
234 PRK11124 artP arginine transpo 100.0 3.6E-37 7.7E-42 319.6 26.6 223 165-405 2-228 (242)
235 PRK11614 livF leucine/isoleuci 100.0 1.2E-37 2.6E-42 322.1 23.0 206 493-711 3-226 (237)
236 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.7E-38 1.9E-42 329.3 22.3 204 497-711 26-250 (269)
237 PRK09473 oppD oligopeptide tra 100.0 2.8E-37 6.1E-42 333.9 26.8 230 162-406 9-250 (330)
238 PRK13651 cobalt transporter AT 100.0 2E-37 4.4E-42 331.6 25.4 233 165-406 2-253 (305)
239 PRK13647 cbiO cobalt transport 100.0 2.1E-37 4.4E-42 327.3 25.0 218 165-405 4-225 (274)
240 PRK10070 glycine betaine trans 100.0 1.5E-37 3.3E-42 342.2 24.8 192 511-711 42-254 (400)
241 cd03264 ABC_drug_resistance_li 100.0 5.4E-38 1.2E-42 319.0 19.6 207 166-397 1-209 (211)
242 cd03218 ABC_YhbG The ABC trans 100.0 1.8E-37 4E-42 319.6 23.9 217 166-405 1-220 (232)
243 cd03226 ABC_cobalt_CbiO_domain 100.0 7.6E-38 1.6E-42 316.6 20.3 200 168-396 2-205 (205)
244 PRK14242 phosphate transporter 100.0 3.3E-37 7.1E-42 322.0 25.7 223 163-405 4-235 (253)
245 TIGR01978 sufC FeS assembly AT 100.0 1.3E-37 2.9E-42 322.7 22.6 206 496-710 1-233 (243)
246 PRK14247 phosphate ABC transpo 100.0 1.8E-37 4E-42 323.3 23.7 209 494-711 2-234 (250)
247 PRK10418 nikD nickel transport 100.0 3.2E-37 6.9E-42 322.4 25.6 206 494-711 3-230 (254)
248 PRK14268 phosphate ABC transpo 100.0 4.3E-37 9.3E-42 322.1 26.5 223 163-405 10-240 (258)
249 PRK14273 phosphate ABC transpo 100.0 2.3E-37 5E-42 323.4 24.2 209 493-710 5-237 (254)
250 PRK13641 cbiO cobalt transport 100.0 3.4E-37 7.4E-42 327.8 25.8 223 165-406 2-233 (287)
251 PRK10895 lipopolysaccharide AB 100.0 2.1E-37 4.6E-42 321.1 23.7 219 165-405 3-224 (241)
252 PRK14248 phosphate ABC transpo 100.0 3E-37 6.4E-42 325.1 25.1 209 492-711 18-252 (268)
253 TIGR03005 ectoine_ehuA ectoine 100.0 1.7E-37 3.6E-42 324.1 22.6 205 496-710 1-235 (252)
254 PRK13648 cbiO cobalt transport 100.0 2.3E-37 4.9E-42 326.2 23.7 210 492-711 4-231 (269)
255 TIGR01188 drrA daunorubicin re 100.0 2.6E-37 5.6E-42 331.0 24.4 208 173-405 1-211 (302)
256 cd03257 ABC_NikE_OppD_transpor 100.0 2.5E-37 5.4E-42 317.5 23.3 216 165-397 1-226 (228)
257 PRK11231 fecE iron-dicitrate t 100.0 3.4E-37 7.4E-42 322.3 24.5 207 495-711 2-227 (255)
258 PRK13638 cbiO cobalt transport 100.0 3E-37 6.5E-42 325.6 24.3 220 165-405 1-223 (271)
259 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.5E-37 7.6E-42 315.1 24.0 204 166-397 1-214 (220)
260 cd03269 ABC_putative_ATPase Th 100.0 2.3E-37 5E-42 314.1 22.5 205 166-397 1-208 (210)
261 PRK13632 cbiO cobalt transport 100.0 2.4E-37 5.2E-42 326.3 23.2 208 493-710 5-230 (271)
262 PRK14241 phosphate transporter 100.0 5E-37 1.1E-41 321.6 25.4 223 165-405 4-240 (258)
263 PRK14267 phosphate ABC transpo 100.0 6.2E-37 1.3E-41 319.9 26.0 222 165-405 4-235 (253)
264 PRK10253 iron-enterobactin tra 100.0 3.6E-37 7.9E-42 323.9 24.3 208 493-711 5-233 (265)
265 TIGR02211 LolD_lipo_ex lipopro 100.0 4.4E-37 9.5E-42 314.4 24.2 210 166-396 2-220 (221)
266 PRK10744 pstB phosphate transp 100.0 5.7E-37 1.2E-41 321.6 25.7 225 162-405 10-242 (260)
267 PRK14235 phosphate transporter 100.0 7.5E-37 1.6E-41 321.9 26.6 224 162-405 16-249 (267)
268 COG1123 ATPase components of v 100.0 2.2E-37 4.7E-42 343.7 23.6 226 162-406 277-518 (539)
269 PRK13644 cbiO cobalt transport 100.0 2.2E-37 4.8E-42 327.0 22.7 205 495-710 1-223 (274)
270 PRK14268 phosphate ABC transpo 100.0 3.7E-37 8E-42 322.6 24.1 209 492-710 9-241 (258)
271 PRK10419 nikE nickel transport 100.0 4.2E-37 9E-42 324.0 24.6 209 494-709 2-239 (268)
272 TIGR03873 F420-0_ABC_ATP propo 100.0 3.4E-37 7.3E-42 322.5 23.6 207 496-711 2-226 (256)
273 PRK11607 potG putrescine trans 100.0 5.5E-37 1.2E-41 336.5 26.2 218 163-406 17-238 (377)
274 PRK14267 phosphate ABC transpo 100.0 3.7E-37 8.1E-42 321.6 23.8 208 494-710 3-236 (253)
275 PRK13633 cobalt transporter AT 100.0 2.8E-37 6.1E-42 327.3 23.1 208 494-711 3-233 (280)
276 PRK11701 phnK phosphonate C-P 100.0 6.9E-37 1.5E-41 320.6 25.6 225 165-405 6-239 (258)
277 PRK14256 phosphate ABC transpo 100.0 5.8E-37 1.3E-41 320.0 25.0 223 165-405 4-234 (252)
278 PRK10771 thiQ thiamine transpo 100.0 2.8E-37 6.1E-42 318.4 22.3 205 495-712 1-220 (232)
279 PRK13640 cbiO cobalt transport 100.0 3.7E-37 8E-42 326.7 23.8 208 493-710 3-231 (282)
280 cd03224 ABC_TM1139_LivF_branch 100.0 3.7E-37 7.9E-42 315.1 22.8 215 166-405 1-219 (222)
281 PRK13636 cbiO cobalt transport 100.0 9.2E-37 2E-41 323.8 26.7 222 165-407 5-231 (283)
282 COG3840 ThiQ ABC-type thiamine 100.0 7.9E-38 1.7E-42 297.9 16.5 203 495-711 1-219 (231)
283 TIGR01186 proV glycine betaine 100.0 2E-37 4.2E-42 337.6 22.0 197 504-711 2-219 (363)
284 PRK14269 phosphate ABC transpo 100.0 5.1E-37 1.1E-41 319.3 24.2 219 165-405 2-228 (246)
285 PRK14240 phosphate transporter 100.0 8.1E-37 1.7E-41 318.5 25.6 221 165-405 3-232 (250)
286 PRK13631 cbiO cobalt transport 100.0 6.3E-37 1.4E-41 329.8 25.6 234 164-406 20-264 (320)
287 PRK14235 phosphate transporter 100.0 5.3E-37 1.1E-41 323.1 24.4 210 492-710 16-250 (267)
288 PRK11147 ABC transporter ATPas 100.0 5.2E-37 1.1E-41 359.5 27.0 209 494-712 2-244 (635)
289 PRK14274 phosphate ABC transpo 100.0 8.7E-37 1.9E-41 320.0 25.9 222 164-405 11-241 (259)
290 PRK10744 pstB phosphate transp 100.0 5E-37 1.1E-41 322.0 24.1 208 493-711 11-244 (260)
291 PRK14239 phosphate transporter 100.0 8.8E-37 1.9E-41 318.5 25.8 221 165-405 5-234 (252)
292 PRK14271 phosphate ABC transpo 100.0 1.4E-36 3.1E-41 321.1 27.7 226 160-405 16-249 (276)
293 cd03268 ABC_BcrA_bacitracin_re 100.0 3.5E-37 7.6E-42 312.3 22.1 203 166-397 1-206 (208)
294 PRK13649 cbiO cobalt transport 100.0 6.3E-37 1.4E-41 324.7 25.0 223 165-405 2-232 (280)
295 TIGR03005 ectoine_ehuA ectoine 100.0 9.1E-37 2E-41 318.5 25.7 225 166-405 1-234 (252)
296 TIGR03740 galliderm_ABC gallid 100.0 3.9E-37 8.4E-42 315.4 22.5 198 496-708 1-210 (223)
297 PRK15112 antimicrobial peptide 100.0 4.3E-37 9.4E-42 323.7 23.5 223 164-406 3-238 (267)
298 PRK11629 lolD lipoprotein tran 100.0 8.6E-37 1.9E-41 315.0 25.2 213 164-397 4-225 (233)
299 PRK09984 phosphonate/organopho 100.0 8.1E-37 1.8E-41 320.7 25.4 225 165-405 4-240 (262)
300 PRK11248 tauB taurine transpor 100.0 6.4E-37 1.4E-41 320.2 24.5 205 165-397 1-211 (255)
301 cd03298 ABC_ThiQ_thiamine_tran 100.0 7.1E-37 1.5E-41 310.8 23.9 194 496-701 1-209 (211)
302 COG0444 DppD ABC-type dipeptid 100.0 2.6E-37 5.6E-42 321.7 21.0 209 495-710 1-242 (316)
303 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.3E-36 2.8E-41 314.3 26.2 216 165-406 1-220 (236)
304 TIGR03411 urea_trans_UrtD urea 100.0 7.4E-37 1.6E-41 317.1 24.4 219 165-405 2-229 (242)
305 TIGR03415 ABC_choXWV_ATP choli 100.0 4.3E-37 9.3E-42 336.4 23.8 200 500-710 29-253 (382)
306 PRK13652 cbiO cobalt transport 100.0 1.2E-36 2.6E-41 322.0 26.3 220 164-406 2-226 (277)
307 PRK14239 phosphate transporter 100.0 8.9E-37 1.9E-41 318.4 24.9 209 493-710 3-235 (252)
308 PRK11247 ssuB aliphatic sulfon 100.0 8.3E-37 1.8E-41 319.5 24.5 205 163-402 10-218 (257)
309 COG4152 ABC-type uncharacteriz 100.0 8.1E-38 1.8E-42 310.3 15.9 214 165-406 2-218 (300)
310 PRK15056 manganese/iron transp 100.0 7.8E-37 1.7E-41 322.6 24.5 208 494-710 5-229 (272)
311 PRK11231 fecE iron-dicitrate t 100.0 2.8E-37 6E-42 323.0 20.8 218 165-405 2-225 (255)
312 PRK14274 phosphate ABC transpo 100.0 8.8E-37 1.9E-41 319.9 24.6 209 492-711 9-243 (259)
313 PRK14248 phosphate ABC transpo 100.0 1.2E-36 2.5E-41 320.7 25.4 223 163-405 19-250 (268)
314 PRK14262 phosphate ABC transpo 100.0 1.6E-36 3.4E-41 316.3 26.0 221 165-405 3-232 (250)
315 PRK14241 phosphate transporter 100.0 8.6E-37 1.9E-41 319.8 24.0 207 495-710 4-241 (258)
316 cd03245 ABCC_bacteriocin_expor 100.0 7.2E-37 1.5E-41 312.6 22.8 193 496-701 3-218 (220)
317 TIGR02323 CP_lyasePhnK phospho 100.0 1.5E-36 3.3E-41 316.9 25.7 225 165-405 3-236 (253)
318 PRK14270 phosphate ABC transpo 100.0 1E-36 2.3E-41 317.9 24.3 209 493-710 2-234 (251)
319 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 9.1E-37 2E-41 352.5 26.3 212 493-712 2-249 (552)
320 COG4161 ArtP ABC-type arginine 100.0 1.1E-36 2.3E-41 284.3 21.7 226 165-408 2-231 (242)
321 PRK14245 phosphate ABC transpo 100.0 1.2E-36 2.5E-41 317.3 24.5 208 494-710 2-233 (250)
322 COG4152 ABC-type uncharacteriz 100.0 1E-37 2.3E-42 309.5 15.7 204 495-712 2-220 (300)
323 PRK13642 cbiO cobalt transport 100.0 1E-36 2.2E-41 322.6 24.3 207 494-710 3-228 (277)
324 PRK14253 phosphate ABC transpo 100.0 1.8E-36 3.9E-41 315.7 25.8 220 164-405 2-231 (249)
325 PRK14237 phosphate transporter 100.0 1.8E-36 3.9E-41 319.0 26.0 224 163-405 18-249 (267)
326 PRK13543 cytochrome c biogenes 100.0 9.5E-37 2.1E-41 310.7 23.1 193 491-696 7-212 (214)
327 PRK15439 autoinducer 2 ABC tra 100.0 1.1E-36 2.4E-41 348.7 26.3 206 493-711 9-229 (510)
328 PRK13650 cbiO cobalt transport 100.0 1.5E-36 3.2E-41 321.6 25.3 218 165-406 4-228 (279)
329 PRK14270 phosphate ABC transpo 100.0 1.9E-36 4.1E-41 315.9 25.8 222 164-405 3-233 (251)
330 PRK14251 phosphate ABC transpo 100.0 1.7E-36 3.6E-41 316.3 25.3 221 165-405 4-233 (251)
331 PRK14256 phosphate ABC transpo 100.0 1.4E-36 3E-41 317.1 24.6 208 494-710 3-235 (252)
332 PRK10584 putative ABC transpor 100.0 1.7E-36 3.7E-41 311.6 24.9 212 164-396 5-225 (228)
333 COG1137 YhbG ABC-type (unclass 100.0 6.1E-38 1.3E-42 303.0 13.0 223 164-408 3-229 (243)
334 PRK14272 phosphate ABC transpo 100.0 1.6E-36 3.5E-41 316.5 24.8 222 165-405 4-234 (252)
335 PRK14251 phosphate ABC transpo 100.0 1.5E-36 3.2E-41 316.6 24.5 208 494-710 3-234 (251)
336 COG4559 ABC-type hemin transpo 100.0 4.6E-37 1E-41 299.3 18.9 213 495-717 1-237 (259)
337 PRK10575 iron-hydroxamate tran 100.0 1.3E-36 2.9E-41 319.6 24.0 219 164-405 10-235 (265)
338 PRK11614 livF leucine/isoleuci 100.0 3.7E-37 8.1E-42 318.5 19.4 217 164-405 4-224 (237)
339 PRK10247 putative ABC transpor 100.0 9.4E-37 2E-41 313.2 22.2 193 493-699 5-217 (225)
340 PRK13639 cbiO cobalt transport 100.0 2.5E-36 5.4E-41 319.2 26.0 221 165-406 1-225 (275)
341 PRK11144 modC molybdate transp 100.0 1.7E-36 3.7E-41 330.9 25.5 197 495-711 1-218 (352)
342 PRK14262 phosphate ABC transpo 100.0 1.6E-36 3.4E-41 316.3 24.1 209 494-711 2-234 (250)
343 PRK14275 phosphate ABC transpo 100.0 1.6E-36 3.4E-41 322.5 24.5 210 492-710 36-269 (286)
344 COG3840 ThiQ ABC-type thiamine 100.0 4.2E-37 9.1E-42 292.9 17.9 215 165-407 1-219 (231)
345 cd03235 ABC_Metallic_Cations A 100.0 5.1E-37 1.1E-41 312.3 19.6 203 168-395 2-210 (213)
346 PRK13644 cbiO cobalt transport 100.0 2.2E-36 4.9E-41 319.4 25.2 219 165-406 1-223 (274)
347 cd03300 ABC_PotA_N PotA is an 100.0 1.9E-36 4E-41 312.4 24.0 205 496-711 1-220 (232)
348 PRK14271 phosphate ABC transpo 100.0 2.4E-36 5.3E-41 319.4 25.4 210 493-711 19-251 (276)
349 PRK10419 nikE nickel transport 100.0 2.7E-36 5.9E-41 317.8 25.5 225 164-405 2-239 (268)
350 PRK13548 hmuV hemin importer A 100.0 1.9E-36 4E-41 317.3 24.1 217 165-405 2-228 (258)
351 PRK14269 phosphate ABC transpo 100.0 1.5E-36 3.3E-41 315.7 23.3 205 495-710 2-229 (246)
352 PRK13645 cbiO cobalt transport 100.0 2.2E-36 4.7E-41 322.0 24.9 224 165-405 6-238 (289)
353 PRK14237 phosphate transporter 100.0 2.6E-36 5.6E-41 317.8 25.2 210 492-710 17-250 (267)
354 TIGR01277 thiQ thiamine ABC tr 100.0 2.1E-36 4.5E-41 307.9 23.5 194 496-701 1-209 (213)
355 PRK10261 glutathione transport 100.0 8.6E-37 1.9E-41 356.8 23.7 212 492-710 9-257 (623)
356 PRK14254 phosphate ABC transpo 100.0 3.5E-36 7.7E-41 319.5 26.1 230 155-405 29-267 (285)
357 TIGR03410 urea_trans_UrtE urea 100.0 2E-36 4.3E-41 311.5 23.4 214 166-405 1-219 (230)
358 TIGR01186 proV glycine betaine 100.0 1.2E-36 2.6E-41 331.4 22.9 213 173-406 1-218 (363)
359 PRK14272 phosphate ABC transpo 100.0 2E-36 4.4E-41 315.8 23.7 207 495-711 4-236 (252)
360 PRK14238 phosphate transporter 100.0 1.9E-36 4.1E-41 319.5 23.7 209 492-710 21-254 (271)
361 PRK10070 glycine betaine trans 100.0 2.3E-36 4.9E-41 332.9 25.2 216 169-405 32-252 (400)
362 PRK14259 phosphate ABC transpo 100.0 2.5E-36 5.3E-41 318.3 24.4 208 492-711 10-253 (269)
363 PRK11300 livG leucine/isoleuci 100.0 2.6E-36 5.6E-41 315.5 24.4 219 165-405 5-241 (255)
364 cd03297 ABC_ModC_molybdenum_tr 100.0 1.2E-36 2.7E-41 309.8 21.4 190 496-701 2-212 (214)
365 PRK10762 D-ribose transporter 100.0 7.2E-37 1.6E-41 349.6 22.0 206 494-709 3-228 (501)
366 TIGR03873 F420-0_ABC_ATP propo 100.0 3.1E-36 6.7E-41 315.3 24.9 217 166-405 2-224 (256)
367 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.2E-36 2.6E-41 320.7 21.9 218 167-405 26-248 (269)
368 PRK09700 D-allose transporter 100.0 1E-36 2.2E-41 349.2 23.1 207 493-709 3-232 (510)
369 PRK14275 phosphate ABC transpo 100.0 3.7E-36 8.1E-41 319.6 25.8 223 163-405 37-268 (286)
370 PRK10253 iron-enterobactin tra 100.0 1E-36 2.2E-41 320.5 21.3 219 164-405 6-231 (265)
371 TIGR02142 modC_ABC molybdenum 100.0 1.4E-36 3.1E-41 331.9 23.1 197 500-711 4-221 (354)
372 PRK14240 phosphate transporter 100.0 2.6E-36 5.7E-41 314.6 24.1 207 495-710 3-233 (250)
373 PRK14254 phosphate ABC transpo 100.0 3.2E-36 7E-41 319.8 25.2 208 492-710 36-268 (285)
374 cd03252 ABCC_Hemolysin The ABC 100.0 2.2E-36 4.7E-41 312.7 23.2 202 496-712 1-226 (237)
375 PRK14249 phosphate ABC transpo 100.0 3.7E-36 8E-41 313.8 25.1 209 493-710 2-234 (251)
376 PRK15134 microcin C ABC transp 100.0 1.7E-36 3.7E-41 348.7 24.8 211 493-710 3-245 (529)
377 PRK14255 phosphate ABC transpo 100.0 3.2E-36 7E-41 314.3 24.5 221 164-404 4-233 (252)
378 cd03214 ABC_Iron-Siderophores_ 100.0 3.5E-36 7.6E-41 298.4 23.4 173 167-396 1-177 (180)
379 COG4181 Predicted ABC-type tra 100.0 8.2E-37 1.8E-41 288.0 17.8 198 494-700 5-225 (228)
380 COG4598 HisP ABC-type histidin 100.0 1.8E-37 3.9E-42 294.4 13.3 208 493-710 4-240 (256)
381 COG4175 ProV ABC-type proline/ 100.0 6.1E-37 1.3E-41 313.9 18.2 204 495-710 4-253 (386)
382 cd03267 ABC_NatA_like Similar 100.0 1.6E-36 3.4E-41 313.7 21.6 189 503-701 29-234 (236)
383 PRK14236 phosphate transporter 100.0 6E-36 1.3E-40 315.9 26.4 224 162-405 22-254 (272)
384 PRK14246 phosphate ABC transpo 100.0 2.4E-36 5.2E-41 316.3 23.1 209 493-711 8-241 (257)
385 PRK14255 phosphate ABC transpo 100.0 4.5E-36 9.7E-41 313.2 25.0 209 493-710 3-235 (252)
386 COG4175 ProV ABC-type proline/ 100.0 1.2E-36 2.6E-41 311.8 20.1 222 165-407 4-254 (386)
387 PRK09580 sufC cysteine desulfu 100.0 3.9E-36 8.5E-41 312.8 24.4 205 495-709 1-233 (248)
388 cd03214 ABC_Iron-Siderophores_ 100.0 9.5E-37 2.1E-41 302.4 18.7 174 497-701 1-178 (180)
389 PRK09580 sufC cysteine desulfu 100.0 2.3E-36 5.1E-41 314.5 22.5 220 165-403 1-231 (248)
390 PRK13549 xylose transporter AT 100.0 1.1E-36 2.4E-41 348.5 21.9 207 493-709 3-230 (506)
391 PRK14249 phosphate ABC transpo 100.0 5.1E-36 1.1E-40 312.7 24.6 221 165-405 4-233 (251)
392 cd03254 ABCC_Glucan_exporter_l 100.0 3.3E-36 7.2E-41 309.6 22.9 200 496-711 3-226 (229)
393 PRK13547 hmuV hemin importer A 100.0 4.8E-36 1E-40 316.3 24.6 205 495-710 1-243 (272)
394 cd03251 ABCC_MsbA MsbA is an e 100.0 3.7E-36 8E-41 310.3 23.1 204 496-711 1-225 (234)
395 PRK13547 hmuV hemin importer A 100.0 5.7E-36 1.2E-40 315.7 24.9 220 165-405 1-242 (272)
396 PRK13640 cbiO cobalt transport 100.0 5.5E-36 1.2E-40 317.7 24.8 220 165-406 5-231 (282)
397 PRK14246 phosphate ABC transpo 100.0 6.4E-36 1.4E-40 313.1 24.9 224 162-405 7-239 (257)
398 PRK14261 phosphate ABC transpo 100.0 3.4E-36 7.4E-41 314.4 22.8 222 164-405 5-235 (253)
399 PRK13635 cbiO cobalt transport 100.0 3.1E-36 6.6E-41 319.1 22.6 218 165-406 5-228 (279)
400 TIGR02324 CP_lyasePhnL phospho 100.0 2.9E-36 6.2E-41 309.2 21.7 193 495-694 1-222 (224)
401 TIGR02982 heterocyst_DevA ABC 100.0 4.1E-36 8.9E-41 307.3 22.7 197 495-699 1-219 (220)
402 cd03299 ABC_ModC_like Archeal 100.0 5.3E-36 1.2E-40 309.6 23.7 204 496-711 1-219 (235)
403 PRK14253 phosphate ABC transpo 100.0 4.8E-36 1E-40 312.5 23.5 208 494-710 2-232 (249)
404 PRK14260 phosphate ABC transpo 100.0 9.9E-36 2.1E-40 312.0 26.0 223 164-405 6-241 (259)
405 PRK14259 phosphate ABC transpo 100.0 8.1E-36 1.8E-40 314.4 25.4 221 164-405 12-251 (269)
406 PRK13538 cytochrome c biogenes 100.0 2.6E-36 5.7E-41 305.2 20.7 187 495-694 1-202 (204)
407 PRK10938 putative molybdenum t 100.0 2.4E-36 5.3E-41 344.4 22.9 201 495-710 3-223 (490)
408 PRK14236 phosphate transporter 100.0 7.7E-36 1.7E-40 315.0 24.8 210 492-710 22-255 (272)
409 CHL00131 ycf16 sulfate ABC tra 100.0 6.5E-36 1.4E-40 312.0 23.9 206 493-707 5-237 (252)
410 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.9E-36 8.4E-41 305.4 21.6 204 166-397 1-209 (211)
411 PRK13545 tagH teichoic acids e 100.0 7.2E-36 1.6E-40 332.9 25.6 211 492-712 18-233 (549)
412 CHL00131 ycf16 sulfate ABC tra 100.0 2.6E-36 5.5E-41 315.0 20.5 222 163-403 5-237 (252)
413 PRK14244 phosphate ABC transpo 100.0 5E-36 1.1E-40 312.8 22.6 207 496-711 6-237 (251)
414 PRK10247 putative ABC transpor 100.0 2.5E-36 5.4E-41 310.0 20.0 206 164-395 6-217 (225)
415 PRK14238 phosphate transporter 100.0 8.8E-36 1.9E-40 314.4 24.6 223 163-405 22-253 (271)
416 PRK13633 cobalt transporter AT 100.0 7.7E-36 1.7E-40 316.3 24.2 219 165-406 4-232 (280)
417 PRK14265 phosphate ABC transpo 100.0 1.1E-35 2.5E-40 314.0 25.4 208 492-710 17-257 (274)
418 TIGR00968 3a0106s01 sulfate AB 100.0 7.1E-36 1.5E-40 309.1 23.3 204 496-710 1-219 (237)
419 PRK14244 phosphate ABC transpo 100.0 1.1E-35 2.4E-40 310.1 25.0 220 166-405 6-235 (251)
420 COG0410 LivF ABC-type branched 100.0 4.4E-36 9.5E-41 298.2 20.6 220 164-408 2-227 (237)
421 PRK14261 phosphate ABC transpo 100.0 9.7E-36 2.1E-40 311.0 24.2 209 493-710 4-236 (253)
422 PRK14243 phosphate transporter 100.0 7.5E-36 1.6E-40 313.8 23.4 207 493-710 8-247 (264)
423 KOG0058 Peptide exporter, ABC 100.0 4.7E-36 1E-40 337.3 23.2 244 133-407 439-691 (716)
424 PRK14265 phosphate ABC transpo 100.0 1.6E-35 3.4E-40 313.0 25.8 223 162-405 17-256 (274)
425 TIGR03269 met_CoM_red_A2 methy 100.0 4.7E-36 1E-40 344.4 23.6 207 496-713 1-260 (520)
426 PRK13632 cbiO cobalt transport 100.0 1.1E-35 2.5E-40 313.6 24.3 218 164-405 6-229 (271)
427 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 8.6E-36 1.9E-40 308.4 23.0 201 496-711 1-226 (238)
428 COG4559 ABC-type hemin transpo 100.0 6E-36 1.3E-40 291.6 20.3 218 165-406 1-229 (259)
429 PRK11288 araG L-arabinose tran 100.0 4.4E-36 9.6E-41 343.1 22.8 200 494-701 3-220 (501)
430 TIGR01184 ntrCD nitrate transp 100.0 3.8E-36 8.1E-41 309.7 20.0 187 513-706 1-199 (230)
431 PRK14266 phosphate ABC transpo 100.0 2E-35 4.3E-40 308.0 25.7 223 164-405 2-232 (250)
432 TIGR02633 xylG D-xylose ABC tr 100.0 3.6E-36 7.8E-41 343.9 21.9 206 495-709 1-228 (500)
433 PRK14258 phosphate ABC transpo 100.0 1.6E-35 3.5E-40 310.7 25.0 209 494-711 6-245 (261)
434 cd03300 ABC_PotA_N PotA is an 100.0 1.7E-35 3.7E-40 305.2 24.6 214 166-405 1-218 (232)
435 PRK13648 cbiO cobalt transport 100.0 1.7E-35 3.6E-40 312.0 25.0 218 164-405 6-229 (269)
436 PRK14260 phosphate ABC transpo 100.0 1.3E-35 2.8E-40 311.1 24.1 208 494-710 6-242 (259)
437 PRK10771 thiQ thiamine transpo 100.0 9E-36 1.9E-40 307.2 22.5 214 165-406 1-218 (232)
438 PRK14258 phosphate ABC transpo 100.0 1.9E-35 4.2E-40 310.2 25.3 221 165-405 7-243 (261)
439 TIGR02770 nickel_nikD nickel i 100.0 9E-36 1.9E-40 306.9 22.1 191 512-710 1-214 (230)
440 cd03244 ABCC_MRP_domain2 Domai 100.0 9.9E-36 2.2E-40 304.4 22.3 193 496-702 3-218 (221)
441 PRK14243 phosphate transporter 100.0 1.7E-35 3.7E-40 311.1 24.6 221 164-405 9-246 (264)
442 PRK10418 nikD nickel transport 100.0 1.2E-35 2.6E-40 310.5 23.2 217 165-405 4-228 (254)
443 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 8.6E-36 1.9E-40 305.8 21.7 197 166-397 23-222 (224)
444 cd03216 ABC_Carb_Monos_I This 100.0 9.7E-36 2.1E-40 290.6 20.8 158 496-700 1-161 (163)
445 cd03223 ABCD_peroxisomal_ALDP 100.0 1.1E-35 2.3E-40 291.1 21.2 164 496-698 1-164 (166)
446 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.8E-36 1.7E-40 306.2 21.1 195 496-701 23-222 (224)
447 cd03221 ABCF_EF-3 ABCF_EF-3 E 100.0 8.9E-36 1.9E-40 284.9 20.1 144 496-698 1-144 (144)
448 TIGR03608 L_ocin_972_ABC putat 100.0 6.7E-36 1.4E-40 302.3 20.1 186 498-694 1-206 (206)
449 cd03234 ABCG_White The White s 100.0 1.2E-35 2.5E-40 305.2 22.1 200 495-701 3-224 (226)
450 PRK14252 phosphate ABC transpo 100.0 2.7E-35 5.8E-40 309.8 25.3 226 162-405 13-247 (265)
451 PRK14257 phosphate ABC transpo 100.0 2.6E-35 5.7E-40 318.2 25.7 211 492-710 77-312 (329)
452 cd03215 ABC_Carb_Monos_II This 100.0 8.3E-36 1.8E-40 296.2 19.7 165 493-699 2-182 (182)
453 cd03248 ABCC_TAP TAP, the Tran 100.0 1.3E-35 2.7E-40 304.8 21.7 197 492-699 8-226 (226)
454 cd03231 ABC_CcmA_heme_exporter 100.0 1.5E-35 3.2E-40 299.1 21.7 185 496-694 1-198 (201)
455 cd03297 ABC_ModC_molybdenum_tr 100.0 1.7E-35 3.8E-40 301.3 22.3 207 166-397 2-212 (214)
456 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.8E-35 4E-40 311.8 23.0 199 496-711 3-225 (275)
457 PRK14252 phosphate ABC transpo 100.0 4E-35 8.6E-40 308.5 25.5 210 492-710 13-248 (265)
458 cd03299 ABC_ModC_like Archeal 100.0 3.3E-35 7.2E-40 303.6 24.4 213 166-405 1-217 (235)
459 PRK13642 cbiO cobalt transport 100.0 2.7E-35 5.8E-40 311.7 24.1 218 165-406 4-228 (277)
460 PRK14264 phosphate ABC transpo 100.0 3.9E-35 8.5E-40 314.5 25.6 211 492-711 42-289 (305)
461 TIGR02982 heterocyst_DevA ABC 100.0 3.7E-35 8.1E-40 300.2 24.1 209 166-395 2-219 (220)
462 COG4604 CeuD ABC-type enteroch 100.0 2.4E-36 5.2E-41 291.0 14.1 219 165-406 1-224 (252)
463 PRK09544 znuC high-affinity zi 100.0 2.9E-35 6.3E-40 306.9 23.4 200 165-405 4-207 (251)
464 COG1119 ModF ABC-type molybden 100.0 3.3E-36 7.2E-41 301.2 15.5 202 491-700 27-252 (257)
465 cd03253 ABCC_ATM1_transporter 100.0 2.8E-35 6E-40 304.1 23.0 200 496-711 1-224 (236)
466 PRK13546 teichoic acids export 100.0 3.5E-35 7.7E-40 308.2 24.1 192 510-712 37-233 (264)
467 PRK11144 modC molybdate transp 100.0 2.4E-35 5.2E-40 321.8 23.7 212 165-405 1-216 (352)
468 COG4608 AppF ABC-type oligopep 100.0 1.2E-35 2.6E-40 303.3 19.8 182 164-405 3-197 (268)
469 COG4604 CeuD ABC-type enteroch 100.0 7.3E-37 1.6E-41 294.6 10.2 212 495-718 1-233 (252)
470 TIGR03740 galliderm_ABC gallid 100.0 2.9E-35 6.3E-40 301.6 22.8 205 166-402 1-208 (223)
471 TIGR00968 3a0106s01 sulfate AB 100.0 4.2E-35 9E-40 303.3 24.0 214 166-405 1-218 (237)
472 cd03267 ABC_NatA_like Similar 100.0 1.8E-35 3.9E-40 305.8 21.2 201 173-397 29-234 (236)
473 TIGR03608 L_ocin_972_ABC putat 100.0 2.8E-35 6.1E-40 297.7 22.0 203 168-390 1-206 (206)
474 cd03247 ABCC_cytochrome_bd The 100.0 2.3E-35 5E-40 292.0 20.9 164 496-701 1-176 (178)
475 PRK14257 phosphate ABC transpo 100.0 5.1E-35 1.1E-39 316.0 25.4 223 164-406 79-312 (329)
476 cd03246 ABCC_Protease_Secretio 100.0 2E-35 4.3E-40 291.1 20.0 159 496-699 1-173 (173)
477 PRK13538 cytochrome c biogenes 100.0 2.8E-35 6.1E-40 297.7 21.5 199 165-390 1-202 (204)
478 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.3E-35 1.8E-39 294.8 24.9 187 494-702 5-204 (207)
479 COG2274 SunT ABC-type bacterio 100.0 1.2E-35 2.7E-40 345.6 21.5 204 494-712 470-697 (709)
480 TIGR01277 thiQ thiamine ABC tr 100.0 4.1E-35 8.9E-40 298.4 22.6 206 166-398 1-210 (213)
481 PRK14266 phosphate ABC transpo 100.0 4.3E-35 9.3E-40 305.5 23.3 205 495-710 3-233 (250)
482 COG4181 Predicted ABC-type tra 100.0 5E-36 1.1E-40 282.7 14.4 211 165-396 6-225 (228)
483 COG1119 ModF ABC-type molybden 100.0 1.1E-35 2.4E-40 297.5 17.7 217 161-397 27-253 (257)
484 TIGR03415 ABC_choXWV_ATP choli 100.0 2.2E-35 4.8E-40 322.9 21.7 216 170-406 29-253 (382)
485 cd03245 ABCC_bacteriocin_expor 100.0 2.2E-35 4.8E-40 301.6 20.2 202 165-397 2-218 (220)
486 PRK10982 galactose/methyl gala 100.0 2.6E-35 5.6E-40 336.1 22.9 202 498-709 1-221 (491)
487 cd03230 ABC_DR_subfamily_A Thi 100.0 1.9E-35 4.1E-40 291.3 18.8 160 496-699 1-173 (173)
488 COG4608 AppF ABC-type oligopep 100.0 1.6E-35 3.4E-40 302.3 18.3 185 493-709 2-197 (268)
489 TIGR02324 CP_lyasePhnL phospho 100.0 5.9E-35 1.3E-39 299.4 22.6 208 165-391 1-223 (224)
490 cd03254 ABCC_Glucan_exporter_l 100.0 3.9E-35 8.4E-40 301.7 21.2 213 165-405 2-224 (229)
491 PRK13539 cytochrome c biogenes 100.0 4E-35 8.7E-40 297.3 20.7 186 495-696 2-200 (207)
492 TIGR02142 modC_ABC molybdenum 100.0 2.2E-35 4.8E-40 322.5 20.2 212 170-405 4-219 (354)
493 PRK13543 cytochrome c biogenes 100.0 2.1E-35 4.5E-40 300.9 18.6 200 164-392 10-212 (214)
494 PRK14264 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 309.9 26.0 222 165-405 45-287 (305)
495 COG4525 TauB ABC-type taurine 100.0 2.4E-35 5.2E-40 283.6 17.5 200 494-701 2-215 (259)
496 PRK15056 manganese/iron transp 100.0 5.6E-35 1.2E-39 308.5 22.1 216 165-405 6-228 (272)
497 COG2274 SunT ABC-type bacterio 100.0 3.7E-35 7.9E-40 341.7 22.5 246 132-407 443-696 (709)
498 cd03248 ABCC_TAP TAP, the Tran 100.0 2.3E-35 5.1E-40 302.8 18.4 210 162-395 8-226 (226)
499 cd03216 ABC_Carb_Monos_I This 100.0 6.4E-35 1.4E-39 284.8 20.5 158 166-396 1-161 (163)
500 PRK14263 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 303.5 24.5 208 493-711 6-245 (261)
No 1
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.2e-90 Score=776.58 Aligned_cols=518 Identities=41% Similarity=0.654 Sum_probs=404.4
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcE------EEEEeeeeecCC-Ch
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNI------DVLLVEQEVVGD-DR 236 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~------~i~~~~q~~~~~-~~ 236 (723)
.+|+++|++++|+++++|+|+||+|.+|++|||||+||||||||||+|+|...|..|++ .+.+..|+.... ..
T Consensus 2 ~~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~~~ 81 (530)
T COG0488 2 SMITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDPEK 81 (530)
T ss_pred ceEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCCCc
Confidence 46999999999999999999999999999999999999999999999999987777664 467777776543 34
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCC
Q 048654 237 SAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGR 316 (723)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~ 316 (723)
+.+..++....+...+..+...+.... +.. ....+..+...+..+..+..++++..+|..||++.. ++
T Consensus 82 tv~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~ 149 (530)
T COG0488 82 TVLDYVIEGFGELRELLAELEEAYALL-------ADP---DDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DR 149 (530)
T ss_pred cHHHHHHhhhHHHHHHHHHHHHHHHhc-------ccc---hhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cC
Confidence 666666555544444444333221100 000 111222233333344457788999999999999854 79
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
++.+||||||+||+||+||+.+|+||||||||||||..++.||.++|.++..|||+||||++|++++|++|+.++.|++.
T Consensus 150 ~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~ 229 (530)
T COG0488 150 PVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLT 229 (530)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCcee
Confidence 99999999999999999999999999999999999999999999999999779999999999999999999999999999
Q ss_pred EecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccc
Q 048654 397 FYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKW 476 (723)
Q Consensus 397 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (723)
.|.|+|+.|.+.++.+.....+.++.+++++++......+......+. + +...+.+...++..... ...+ ..
T Consensus 230 ~y~Gny~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~--k----~a~sr~k~l~k~~~~~~-~~~~-~~ 301 (530)
T COG0488 230 PYKGNYSSYLEQKAERLRQEAAAYEKQQKELAKEQEWIRRGKAAASKA--K----KAKSRIKRLEKLEARLA-EERP-VE 301 (530)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH--H----HHHHHHHHHHHHHhhhh-hccc-cc
Confidence 999999999998887776666666655555554432211110000000 0 00000011111111000 0001 00
Q ss_pred cccceeeecCCCC-CCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEE
Q 048654 477 RDYSVEFHFPEPT-ELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVR 555 (723)
Q Consensus 477 ~~~~~~~~~~~~~-~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~ 555 (723)
......+.|+.+. ..+.++++++|+++.|++. ..+++++||.|.+|++||||||||+|||||||+|+|.+.|.+|.|.
T Consensus 302 ~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~ 380 (530)
T COG0488 302 EGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVK 380 (530)
T ss_pred ccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEE
Confidence 1122334555544 3568899999999999764 4689999999999999999999999999999999999999999999
Q ss_pred ECCceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 556 RSQKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 556 ~~~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
+....++||+.|+..... ...+++.++...++.. ....++.+|++|++......+++..||||||.||+||++++
T Consensus 381 ~g~~v~igyf~Q~~~~l~-~~~t~~d~l~~~~~~~----~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~ 455 (530)
T COG0488 381 VGETVKIGYFDQHRDELD-PDKTVLEELSEGFPDG----DEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLL 455 (530)
T ss_pred eCCceEEEEEEehhhhcC-ccCcHHHHHHhhCccc----cHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhc
Confidence 998899999999874433 4456777765555432 25779999999999988888999999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKEDL 713 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~~ 713 (723)
.+|+||||||||||||+.++++|.++|.+|.+|||+||||.+|+..+| +++|++++ .+..|.|++++|.+..
T Consensus 456 ~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f~Gtvl~VSHDr~Fl~~va-----~~i~~~~~-~~~~~~g~y~~y~~~~ 527 (530)
T COG0488 456 QPPNLLLLDEPTNHLDIESLEALEEALLDFEGTVLLVSHDRYFLDRVA-----TRIWLVED-KVEEFEGGYEDYLEQK 527 (530)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhc-----ceEEEEcC-ceeEcCCCHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999 49999998 8888999999997753
No 2
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.1e-90 Score=723.74 Aligned_cols=539 Identities=52% Similarity=0.879 Sum_probs=466.5
Q ss_pred cccCCccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChH
Q 048654 158 DADANVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRS 237 (723)
Q Consensus 158 ~~~~~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~ 237 (723)
++..+.++|.|+|++++-.|+.+|.|.||.|-.|.+||||||||-||||||+.|+-.-...|.++.+.+++|++..++.+
T Consensus 257 A~lEna~DIKiEnF~ISA~Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~RalaIPpnIDvLlCEQEvvad~t~ 336 (807)
T KOG0066|consen 257 AQLENAMDIKIENFDISAQGKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARALAIPPNIDVLLCEQEVVADSTS 336 (807)
T ss_pred HHHhhcccceeeeeeeecccceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhccCCCCCceEeeeeeeeecCcH
Confidence 34567789999999999999999999999999999999999999999999999998777788999999999999988888
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCC
Q 048654 238 AIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRP 317 (723)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 317 (723)
++..++..+.....+..+...++..... + .....+++..++..+..++.+.++++++.+|..|||+..+.++|
T Consensus 337 Ai~tvl~aD~kRl~lLeee~~L~~q~e~-----G--d~taaErl~~v~~ELraiGA~sAEarARRILAGLGFskEMQ~rP 409 (807)
T KOG0066|consen 337 AIDTVLKADKKRLALLEEEAKLMSQIEE-----G--DTTAAERLKEVADELRAIGADSAEARARRILAGLGFSKEMQERP 409 (807)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHc-----C--chHHHHHHHHHHHHHHHhccccchhHHHHHHhhcCCChhHhcCC
Confidence 8888877766655555544433221100 1 23556778888888888999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
...+|||||+||+|||||+.+|.+|+|||||||||..++.||-+||+.|++|++|||||-.|+.++|+.||+|++.++++
T Consensus 410 t~kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWkKTLLIVSHDQgFLD~VCtdIIHLD~qkLhy 489 (807)
T KOG0066|consen 410 TTKFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLHY 489 (807)
T ss_pred ccccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHHhhhhheeEEEecccchHHHHHHHHhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhh--HHHHHHHHHHHHHHHhhhhcc-CcccCCCCCCCCCc
Q 048654 398 YRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQ--EKVKDRAKSAAAKEASKNKAK-GKVDEDEPLPEAPK 474 (723)
Q Consensus 398 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 474 (723)
|+|+|.-|..+|.+.+.++.+.|+.++++++.++..|....+ ..++... .+.+.+.+.+ ...+++..+++...
T Consensus 490 YrGNY~~FKKmY~Qk~~e~~K~yekQeK~LkelKa~GkS~KqAEkq~Ke~l----trKq~K~~~Knq~dded~gapELL~ 565 (807)
T KOG0066|consen 490 YRGNYTLFKKMYAQKMQEHEKNYEKQEKQLKELKAEGKSAKQAEKQVKEQL----TRKQKKGGKKNQNDDEDAGAPELLQ 565 (807)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH----HHHHHhccccccCccccccCHHHHh
Confidence 999999999999999999999999999999998877753322 1122111 1111111111 12223333333344
Q ss_pred cccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceE
Q 048654 475 KWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEV 554 (723)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I 554 (723)
+..+|.+.|.||.|+...+|+|-+.+|+|.|++. .++|.+++|-|....+||||||||.||||||++|.|-+.|+.|+.
T Consensus 566 RpKEY~VkF~FPep~~L~PPvLGlH~VtFgy~gq-kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~ 644 (807)
T KOG0066|consen 566 RPKEYSVKFQFPEPTKLNPPVLGLHDVTFGYPGQ-KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGEL 644 (807)
T ss_pred CchheEEEEecCCCCCCCCCeeecccccccCCCC-CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchh
Confidence 5567899999999999999999999999999875 578999999999999999999999999999999999999999999
Q ss_pred EECCceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 555 RRSQKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 555 ~~~~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral 634 (723)
+.+.+.+||++.|+....+...+++++|+.+.|.. ..+.++..|..|||..+.+.-.+..|||||+.||+||-..
T Consensus 645 RKnhrL~iG~FdQh~~E~L~~Eetp~EyLqr~FNl-----pyq~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLa 719 (807)
T KOG0066|consen 645 RKNHRLRIGWFDQHANEALNGEETPVEYLQRKFNL-----PYQEARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELA 719 (807)
T ss_pred hccceeeeechhhhhHHhhccccCHHHHHHHhcCC-----ChHHHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHh
Confidence 99999999999999988999999999998776643 3567899999999998887778899999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHHHH
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKEDLQ 714 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~~~ 714 (723)
+..|+|||||||||+||++++.+|.++|++|.++|||||||..++.+.- ..+||+++..|..++|++++|+.+++
T Consensus 720 l~~PDvlILDEPTNNLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~-----C~LwVvE~Q~i~eIdGdFeDYkkEVL 794 (807)
T KOG0066|consen 720 LGGPDVLILDEPTNNLDIESIDALAEAINEYNGGVIMVSHDERLIVETD-----CNLWVVENQGIDEIDGDFEDYKKEVL 794 (807)
T ss_pred cCCCCEEEecCCCCCcchhhHHHHHHHHHhccCcEEEEecccceeeecC-----ceEEEEccCChhhccccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987652 47999999999999999999999988
Q ss_pred HHHH
Q 048654 715 REIK 718 (723)
Q Consensus 715 ~~~~ 718 (723)
..+-
T Consensus 795 daLG 798 (807)
T KOG0066|consen 795 DALG 798 (807)
T ss_pred HHHH
Confidence 7764
No 3
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.4e-85 Score=767.44 Aligned_cols=532 Identities=47% Similarity=0.823 Sum_probs=395.2
Q ss_pred cCCccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCC-CCCCcEEEEEeeeeecCCChHH
Q 048654 160 DANVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKI-PVPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 160 ~~~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~-~~~~~~~i~~~~q~~~~~~~~~ 238 (723)
.....+|+++||+++|+++++|+|+||+|.+|+++||||+|||||||||++|+|... ..|..+.|.+++|++.+.+.+.
T Consensus 172 ~~~~~~I~i~nls~~y~~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~~g~p~~g~I~~~~Q~~~g~~~t~ 251 (718)
T PLN03073 172 GPAIKDIHMENFSISVGGRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPKNCQILHVEQEVVGDDTTA 251 (718)
T ss_pred CCCceeEEEceEEEEeCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCCCCEEEEEeccCCCCCCCH
Confidence 345678999999999999999999999999999999999999999999999998642 2467788999898866554444
Q ss_pred HHHHHHhhHHHHH-HHHHHHhhhcC------cCCC----CCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhC
Q 048654 239 IQAVVSAHEELVK-LREEVASLQNS------TSVD----GEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGL 307 (723)
Q Consensus 239 ~~~~~~~~~~~~~-l~~~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~l 307 (723)
.+.+.....+... +...+.++.+. .... .............++..+++.+...+.+..++++..+|..+
T Consensus 252 ~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~L~~l 331 (718)
T PLN03073 252 LQCVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDKDAVSQRLEEIYKRLELIDAYTAEARAASILAGL 331 (718)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHC
Confidence 4333222222111 11222222110 0000 00001112233455666667776667778889999999999
Q ss_pred CCCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEE
Q 048654 308 GFTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEI 387 (723)
Q Consensus 308 gl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~I 387 (723)
||.....++++.+|||||||||+|||||+.+|+||||||||||||+.++.||.++|++++.|||+||||++++..+||+|
T Consensus 332 gl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~tviivsHd~~~l~~~~d~i 411 (718)
T PLN03073 332 SFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREFLNTVVTDI 411 (718)
T ss_pred CCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEE
Confidence 99755567899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCC
Q 048654 388 IHLHDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDE 467 (723)
Q Consensus 388 i~L~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (723)
++|++|++..|.|+|+.|......++....+.++.++++.+..+....+ ....+.... ......+...++....
T Consensus 412 ~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~e~~~k~~~~l~~~i~~-----~~~~a~~~~-~~~s~~k~l~~~~~~~ 485 (718)
T PLN03073 412 LHLHGQKLVTYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQAFIDK-----FRYNAKRAS-LVQSRIKALDRLGHVD 485 (718)
T ss_pred EEEECCEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhhhhhhH-HHhhcchHHHHHhhhh
Confidence 9999999988999999998776666655555666555555443321110 000000000 0000000000110000
Q ss_pred CCCCCCccccccceeeecCCCC-CCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcC
Q 048654 468 PLPEAPKKWRDYSVEFHFPEPT-ELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGD 546 (723)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl 546 (723)
.... .....+.++.+. ..+.++|+++||++.|++. ..+|+||||+|.+|++++|+|||||||||||++|+|+
T Consensus 486 ~~~~------~~~~~~~~~~~~~~~~~~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gl 558 (718)
T PLN03073 486 AVVN------DPDYKFEFPTPDDRPGPPIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGE 558 (718)
T ss_pred cccc------CCCceeecCCCccCCCCceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCC
Confidence 0000 011223344321 2245799999999999643 3589999999999999999999999999999999999
Q ss_pred CCCCcceEEECCceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHH
Q 048654 547 LSPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKA 626 (723)
Q Consensus 547 ~~p~~G~I~~~~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkq 626 (723)
++|++|+|.+.++.+++|++|++...+.+..+....+...++.. ..+.++.+|+.|||......+++.+|||||||
T Consensus 559 l~p~~G~I~~~~~~~igyv~Q~~~~~l~~~~~~~~~~~~~~~~~----~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkq 634 (718)
T PLN03073 559 LQPSSGTVFRSAKVRMAVFSQHHVDGLDLSSNPLLYMMRCFPGV----PEQKLRAHLGSFGVTGNLALQPMYTLSGGQKS 634 (718)
T ss_pred CCCCCceEEECCceeEEEEeccccccCCcchhHHHHHHHhcCCC----CHHHHHHHHHHCCCChHHhcCCccccCHHHHH
Confidence 99999999998878899999986444444444332222222211 24568899999999754445678999999999
Q ss_pred HHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 627 RVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 627 Rv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
||+|||+|+.+|+||||||||+|||+.++..+.+.|.++.+|||+||||++++..+|| +||+|++|+|+.+.|++
T Consensus 635 RvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~d-----rv~~l~~G~i~~~~g~~ 709 (718)
T PLN03073 635 RVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVD-----ELWVVSEGKVTPFHGTF 709 (718)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCC-----EEEEEECCEEEEeCCCH
Confidence 9999999999999999999999999999999999999988899999999999999995 99999999998788999
Q ss_pred HHHHHHH
Q 048654 707 EEYKEDL 713 (723)
Q Consensus 707 ~~~~~~~ 713 (723)
++|++.+
T Consensus 710 ~~~~~~~ 716 (718)
T PLN03073 710 HDYKKTL 716 (718)
T ss_pred HHHHHHh
Confidence 9887654
No 4
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-85 Score=763.00 Aligned_cols=511 Identities=37% Similarity=0.642 Sum_probs=372.5
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEE------EEEeeeeecCCChHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNID------VLLVEQEVVGDDRSA 238 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~------i~~~~q~~~~~~~~~ 238 (723)
+|+++||+++|+++++|+||||+|.+|+++|||||||||||||||+|+|+..|..|.+. +.|+.|.......+.
T Consensus 1 ~i~i~nls~~~g~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~~~~~~ 80 (638)
T PRK10636 1 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPALPQPA 80 (638)
T ss_pred CEEEEEEEEEeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCCCH
Confidence 48899999999999999999999999999999999999999999999998766544432 122333221111223
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
+..+.........+...+....... . ...+......+...+.+....++..+|+.|||.....++++
T Consensus 81 ~~~v~~~~~~~~~l~~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 147 (638)
T PRK10636 81 LEYVIDGDREYRQLEAQLHDANERN----------D---GHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPV 147 (638)
T ss_pred HHHHHHhhHHHHHHHHHHHHHhccC----------C---HHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCch
Confidence 3322211111111111111110000 0 00111111111122233456789999999999644457999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
.+|||||||||+|||||+.+|+||||||||||||+.++.||.++|++++.|||+||||++++..+||+|++|++|++..|
T Consensus 148 ~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~ 227 (638)
T PRK10636 148 SDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFEY 227 (638)
T ss_pred hhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEe
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999989
Q ss_pred cCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHH-hhhhccCcccCCCCCCCCCcccc
Q 048654 399 RGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEA-SKNKAKGKVDEDEPLPEAPKKWR 477 (723)
Q Consensus 399 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 477 (723)
.|+|+.|......+.....+.++.+++.+++......+.. ..+.. .+.+ .+.+...++....+ +. .
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~-----~~a~~--~~~a~~r~~~l~~~~~~~~----~~--~ 294 (638)
T PRK10636 228 TGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFR-----AKATK--AKQAQSRIKMLERMELIAP----AH--V 294 (638)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhhhh--HHHHHHHHHHHHHhhcccc----cc--c
Confidence 9999999876665555555555555555544322111000 00000 0000 00000011110000 00 0
Q ss_pred ccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEEC
Q 048654 478 DYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRS 557 (723)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~ 557 (723)
.....+.|+.+...+.++|+++||++.|+++ .+|+||||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~--~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~ 372 (638)
T PRK10636 295 DNPFHFSFRAPESLPNPLLKMEKVSAGYGDR--IILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLA 372 (638)
T ss_pred CCceeEecCCCccCCCceEEEEeeEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEC
Confidence 1234456665544567899999999999753 58999999999999999999999999999999999999999999987
Q ss_pred CceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 558 QKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 558 ~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
....+||++|+....+....++...+....+. .....++.+|..|++......+++..|||||||||+||++|+.+
T Consensus 373 ~~~~igy~~Q~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 373 KGIKLGYFAQHQLEFLRADESPLQHLARLAPQ----ELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred CCEEEEEecCcchhhCCccchHHHHHHHhCch----hhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 66789999996433333333443332222111 13456889999999975444578899999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
|+||||||||||||+.++..|.++|.++.+|||+||||++++..+|| +|++|++|+|+.+.|++++|.+.
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~~gtvi~vSHd~~~~~~~~d-----~i~~l~~G~i~~~~g~~~~~~~~ 518 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDFEGALVVVSHDRHLLRSTTD-----DLYLVHDGKVEPFDGDLEDYQQW 518 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHhCC-----EEEEEECCEEEEcCCCHHHHHHH
Confidence 99999999999999999999999999998899999999999999995 99999999998789999998543
No 5
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=4.5e-86 Score=713.59 Aligned_cols=538 Identities=44% Similarity=0.795 Sum_probs=442.5
Q ss_pred CCccccCCccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCC
Q 048654 155 GQDDADANVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGD 234 (723)
Q Consensus 155 ~~~~~~~~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~ 234 (723)
|.......+.++.+.|++++|.++.+++|+.|++.+|+.|||+|+|||||||+|++|+|...|.|.+..+++..+++...
T Consensus 65 g~l~s~~~s~dvk~~sls~s~~g~~l~kd~~~El~~g~rygLiG~nG~Gkst~L~~i~~~e~P~p~~~d~y~ls~e~~ps 144 (614)
T KOG0927|consen 65 GNLFSHPISRDVKIESLSLSFHGVELIKDVTLELNRGRRYGLIGPNGSGKSTFLRAIAGREVPIPEHIDFYLLSREIEPS 144 (614)
T ss_pred cccccCcccccceeeeeeeccCCceeeeeeeEEecCCceEEEEcCCCCcHhHHHHHHhcCCCCCCcccchhhhcccCCCc
Confidence 43344556678999999999999999999999999999999999999999999999999999999999998888877655
Q ss_pred ChHHHHHHH-HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccc
Q 048654 235 DRSAIQAVV-SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEM 313 (723)
Q Consensus 235 ~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~ 313 (723)
..+.+..++ ....+..++....-.+.... .....+.+...++++..++.+..+.++..+|..+||...+
T Consensus 145 ~~~av~~v~~~~~~e~~rle~~~E~l~~~~----------d~~~~~~l~~~~~r~~~~d~~~~~~k~~~il~glgf~~~m 214 (614)
T KOG0927|consen 145 EKQAVQAVVMETDHERKRLEYLAEDLAQAC----------DDKEKDELDELYERLDEMDNDTFEAKAAKILHGLGFLSEM 214 (614)
T ss_pred hHHHHHHHhhhhHHHHHHHHHHHHHHHhhc----------cchhhhHHHHHHHHHHhhCchhHHHHHHHHHHhcCCCHhH
Confidence 555555555 22233333322222221110 0011234455677777778888899999999999999888
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCc-EEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 314 QGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKK-TLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 314 ~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~-TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
.++.+..||||||+|++|||+|+.+|++|||||||||||+.++.||.++|.++.. ++|+++|+.+|++.+|++||+|++
T Consensus 215 ~~k~~~~~SgGwrmR~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLee~L~k~d~~~lVi~sh~QDfln~vCT~Ii~l~~ 294 (614)
T KOG0927|consen 215 QDKKVKDLSGGWRMRAALARALFQKPDLLLLDEPTNHLDLEAIVWLEEYLAKYDRIILVIVSHSQDFLNGVCTNIIHLDN 294 (614)
T ss_pred HHHHhhccCchHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHhccCceEEEEecchhhhhhHhhhhheecc
Confidence 8999999999999999999999999999999999999999999999999999987 899999999999999999999999
Q ss_pred CEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhH--HHHHHHHHHHHHHHhhhhccCcccCCCCCC
Q 048654 393 QKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQE--KVKDRAKSAAAKEASKNKAKGKVDEDEPLP 470 (723)
Q Consensus 393 G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (723)
+++++|.|||+.|...+.+......+.|+.+++++...+......... ....++. .+.+-..++....- .
T Consensus 295 kkl~~y~Gnydqy~~tr~E~~~~q~K~~~kqqk~i~~~K~~ia~~g~g~a~~~rka~-------s~~K~~~km~~~gL-~ 366 (614)
T KOG0927|consen 295 KKLIYYEGNYDQYVKTRSELEENQMKAYEKQQKQIAHMKDLIARFGHGSAKLGRKAQ-------SKEKTLDKMEADGL-T 366 (614)
T ss_pred cceeeecCCHHHHhhHHHHHhHHHHHHHHHHHhHHHHhhHHHHhhcccchhhhHHHh-------hhhhhHHHHhhccc-c
Confidence 999999999999998888888888888888888877655332211111 1111111 01111112221110 1
Q ss_pred CCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC
Q 048654 471 EAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT 550 (723)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~ 550 (723)
+.+ ..+....|.|+.-...++|++.+.||+|+|.+.. .++++++|.|..++++++|||||+|||||||+|+|.+.|+
T Consensus 367 ek~--~~~k~l~~~f~~vg~~p~pvi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~ 443 (614)
T KOG0927|consen 367 EKV--VGEKVLSFRFPEVGKIPPPVIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPT 443 (614)
T ss_pred ccc--cCCceEEEEcccccCCCCCeEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccc
Confidence 111 1234567778776666789999999999998764 7899999999999999999999999999999999999999
Q ss_pred cceEEECCceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHH
Q 048654 551 EGEVRRSQKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 551 ~G~I~~~~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~l 630 (723)
.|.|..+...+++++.|+..+.+.+..+.+++++..+++. ...+.++.+|++|||.+.....|+.+||+|||.||+|
T Consensus 444 ~G~vs~~~H~~~~~y~Qh~~e~ldl~~s~le~~~~~~~~~---~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlF 520 (614)
T KOG0927|consen 444 IGMVSRHSHNKLPRYNQHLAEQLDLDKSSLEFMMPKFPDE---KELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLF 520 (614)
T ss_pred cccccccccccchhhhhhhHhhcCcchhHHHHHHHhcccc---chHHHHHHHHHHhCCCccccccchhhcccccchhHHH
Confidence 9999998888899999998888888888888887777641 2567899999999999888889999999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+.++.+|+||||||||||||+.+++++.++|++|.++||+||||+.++.++++ +||++.+|.+..++|++..|+
T Consensus 521 a~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~~Ggvv~vSHDfrlI~qVae-----Ei~~c~~~~~~~~~G~i~~yk 595 (614)
T KOG0927|consen 521 ARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEFPGGVVLVSHDFRLISQVAE-----EIWVCENGTVTKWDGDIEIYK 595 (614)
T ss_pred HHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhccCCceeeeechhhHHHHHHH-----HhHhhccCceeecCccHHHHH
Confidence 999999999999999999999999999999999999999999999999999994 999999999999999999999
Q ss_pred HHHHHHHHhhh
Q 048654 711 EDLQREIKAEV 721 (723)
Q Consensus 711 ~~~~~~~~~~~ 721 (723)
+.+.+.+..|.
T Consensus 596 ~~l~~~~~~e~ 606 (614)
T KOG0927|consen 596 EHLKKKRAKED 606 (614)
T ss_pred HHHHHHHhhhh
Confidence 98887776654
No 6
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=6.2e-82 Score=738.09 Aligned_cols=517 Identities=27% Similarity=0.470 Sum_probs=363.9
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeee--------eecC-C
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQ--------EVVG-D 234 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q--------~~~~-~ 234 (723)
.+|+++||+++|+++++|+||||+|++|+++||||||||||||||++|+|+..|.. |.|.+.+. .... .
T Consensus 2 ~~l~i~~ls~~~~~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~--G~I~~~~~~~~~~l~q~~~~~~ 79 (635)
T PRK11147 2 SLISIHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDD--GRIIYEQDLIVARLQQDPPRNV 79 (635)
T ss_pred cEEEEeeEEEEeCCceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCC--eEEEeCCCCEEEEeccCCCCCC
Confidence 36999999999999999999999999999999999999999999999999876544 44443321 1100 0
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcccc
Q 048654 235 DRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQ 314 (723)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~ 314 (723)
.......+................+...... .. .......+..+...+...+......++.++|+.|||. .
T Consensus 80 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---~ 150 (635)
T PRK11147 80 EGTVYDFVAEGIEEQAEYLKRYHDISHLVET----DP--SEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---P 150 (635)
T ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHhcc----Cc--hHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC---C
Confidence 1111221110000000000000001000000 00 0000111111111122222234567889999999996 2
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++++.+|||||||||+|||||+.+|+||||||||||||+.++.||.++|.+++.|||+||||++++..+||+|++|++|+
T Consensus 151 ~~~~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~ 230 (635)
T PRK11147 151 DAALSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGK 230 (635)
T ss_pred CCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 68999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred EEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCc
Q 048654 395 LHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPK 474 (723)
Q Consensus 395 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (723)
++.|.|+|+.|...++.+.......++.+++.+++......+. .+ +... +...+.+...++... . .. +.
T Consensus 231 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--a~~~--~~~~r~~~~~~~~~~-~-~~-~~ 299 (635)
T PRK11147 231 LVSYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQG----IK--ARRT--RNEGRVRALKALRRE-R-SE-RR 299 (635)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hh--hhhh--hHHHHHHHHHHhhhh-h-cc-cc
Confidence 9889999999988766655444444444444443322111100 00 0000 000000000011000 0 00 00
Q ss_pred cccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceE
Q 048654 475 KWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEV 554 (723)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I 554 (723)
. ......+.|+.+...+.++|+++||++.|+++ .+|++|||+|.+|++++|+|||||||||||++|+|+++|++|+|
T Consensus 300 ~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i 376 (635)
T PRK11147 300 E-VMGTAKMQVEEASRSGKIVFEMENVNYQIDGK--QLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRI 376 (635)
T ss_pred c-cCCceeEEeCCCCCCCCceEEEeeeEEEECCe--EEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEE
Confidence 0 01123455554444467799999999999753 58999999999999999999999999999999999999999999
Q ss_pred EECCceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 555 RRSQKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 555 ~~~~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral 634 (723)
.+.....+||++|+.. .+....++...+...............++.+|+.|++......+++.+|||||||||+||++|
T Consensus 377 ~~~~~~~i~y~~q~~~-~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al 455 (635)
T PRK11147 377 HCGTKLEVAYFDQHRA-ELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLF 455 (635)
T ss_pred EECCCcEEEEEeCccc-ccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHH
Confidence 9865567999999642 122222333332221111000012346788999999965444578899999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEE-CCeEEecCCCHHHHHH
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVE-NGTVSRFPGTFEEYKE 711 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~-~G~i~~~~g~~~~~~~ 711 (723)
+.+|+||||||||||||+.++..|.++|+++++|||+||||++++..+|| +||+|+ +|+|+.|.|++++|.+
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d-----~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVT-----ECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcC-----EEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999998899999999999999995 999998 8999999999999965
No 7
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.6e-84 Score=696.59 Aligned_cols=500 Identities=47% Similarity=0.761 Sum_probs=401.6
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
...+|.+.+++..||++.+|++.++++..|.+|||||+||+|||||||+|+. +++++..++|++.+........
T Consensus 77 ~~~Di~~~~fdLa~G~k~LL~~a~L~L~~GrRYGLvGrNG~GKsTLLRaia~------~~v~~f~veqE~~g~~t~~~~~ 150 (582)
T KOG0062|consen 77 KSKDIHIDNFDLAYGGKILLNKANLTLSRGRRYGLVGRNGIGKSTLLRAIAN------GQVSGFHVEQEVRGDDTEALQS 150 (582)
T ss_pred cccceeeeeeeeeecchhhhcCCceeeecccccceeCCCCCcHHHHHHHHHh------cCcCccCchhheeccchHHHhh
Confidence 3568999999999999999999999999999999999999999999999984 3445555666766655444333
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCch-HHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSD-AAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
+...+.....+... .-. +... ...+.+.++|..|||++++..+++.+
T Consensus 151 ~l~~D~~~~dfl~~-------------------------------e~~-l~~~~~l~ei~~~~L~glGFt~emq~~pt~s 198 (582)
T KOG0062|consen 151 VLESDTERLDFLAE-------------------------------EKE-LLAGLTLEEIYDKILAGLGFTPEMQLQPTKS 198 (582)
T ss_pred hhhccHHHHHHHHh-------------------------------hhh-hhccchHHHHHHHHHHhCCCCHHHHhccccc
Confidence 33222211111100 000 0000 11222333899999999999999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||||||+|++|||||+.+|||||||||||+||..++.||.++|..|+.|+|+||||..|++++|+.||++++-++.+|.|
T Consensus 199 lSGGWrMrlaLARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~~~T~liVSHDr~FLn~V~tdIIH~~~~kL~~YkG 278 (582)
T KOG0062|consen 199 LSGGWRMRLALARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTWKITSLIVSHDRNFLNTVCTDIIHLENLKLDYYKG 278 (582)
T ss_pred cCcchhhHHHHHHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhCCceEEEEeccHHHHHHHHHHHHHHhhhhhhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccccc
Q 048654 401 NFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDYS 480 (723)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (723)
||+.|.....++...++..|+.+.+.....+.+.. +.+..+..+. ..+.+.+-.+++ +.......+..
T Consensus 279 N~~~Fvk~k~E~~~n~qrefe~q~~~R~h~q~fid-----~FrYna~ra~-svqSRIk~L~kl------~~lk~~~~~~~ 346 (582)
T KOG0062|consen 279 NYSQFVKTKPEAKKNQQREFEVQMKYRAHLQVFID-----KFRYNAARAS-SVQSRIKMLGKL------PALKSTLIEVL 346 (582)
T ss_pred cHHHHHHhhHHhhhhhhhhcchHHHHHHHHHHHHH-----HhccCcccch-hHHHHHHHhccC------CCCCccceecc
Confidence 99999998888887777777765554443322111 0001010000 000011111111 11111122344
Q ss_pred eeeecCCC-CCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc
Q 048654 481 VEFHFPEP-TELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK 559 (723)
Q Consensus 481 ~~~~~~~~-~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~ 559 (723)
+.|.||++ ....+|+|++.+|+|.|+....+.+.++++.++.-++++++|+||+||||+++++.|.+.|..|.+.++++
T Consensus 347 ~~~~fP~~~e~~~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~r 426 (582)
T KOG0062|consen 347 IGFLFPTEGEVLSPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHPR 426 (582)
T ss_pred cceecCCCCCcCCCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeeccc
Confidence 67788874 34568999999999999865436789999999999999999999999999999999999999999999999
Q ss_pred eeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 560 LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 560 ~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
.+++|++|+..+.+....+.+.++...++.. .++.++..|+.|||++.+..+++.+||||||-||+||.+.+.+|+
T Consensus 427 ~ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~----~~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~Ph 502 (582)
T KOG0062|consen 427 LRIKYFAQHHVDFLDKNVNAVDFMEKSFPGK----TEEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPH 502 (582)
T ss_pred ceecchhHhhhhHHHHHhHHHHHHHHhCCCC----CHHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCc
Confidence 9999999998888777767777776666654 567899999999999988888899999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHHHHHHHHh
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKEDLQREIKA 719 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~~~~~~~~ 719 (723)
+|||||||||||..+..+|.++|+.|+++|||||||.+|+..+|+ ++|++++|+|+.+.|...+|+.-...++++
T Consensus 503 lLVLDEPTNhLD~dsl~AL~~Al~~F~GGVv~VSHd~~fi~~~c~-----E~Wvve~g~vt~ieg~~~~yKkl~~~e~~~ 577 (582)
T KOG0062|consen 503 LLVLDEPTNHLDRDSLGALAKALKNFNGGVVLVSHDEEFISSLCK-----ELWVVEDGKVTPIEGGIDKYKKLLGAELRA 577 (582)
T ss_pred EEEecCCCccccHHHHHHHHHHHHhcCCcEEEEECcHHHHhhcCc-----eeEEEcCCcEEeeeccHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999994 999999999999999999999888877765
Q ss_pred h
Q 048654 720 E 720 (723)
Q Consensus 720 ~ 720 (723)
.
T Consensus 578 ~ 578 (582)
T KOG0062|consen 578 K 578 (582)
T ss_pred h
Confidence 4
No 8
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-80 Score=707.92 Aligned_cols=519 Identities=31% Similarity=0.554 Sum_probs=358.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEE------EEEeeeeecC-CChH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNID------VLLVEQEVVG-DDRS 237 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~------i~~~~q~~~~-~~~~ 237 (723)
+|+++|++++|+++++|+|+||+|.+|++++|+|||||||||||++|+|+..|..|.+. +.++.|+... ...+
T Consensus 1 ml~i~~ls~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~~t 80 (530)
T PRK15064 1 MLSTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEEFT 80 (530)
T ss_pred CEEEEEEEEEeCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCCCc
Confidence 48899999999999999999999999999999999999999999999998766555432 2333343221 1223
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCC
Q 048654 238 AIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRP 317 (723)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 317 (723)
..+++................+...... .... ...+......+..........++.++|+.+|+.....+++
T Consensus 81 v~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 152 (530)
T PRK15064 81 VLDTVIMGHTELWEVKQERDRIYALPEM-----SEED---GMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGL 152 (530)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhccccc-----ccch---HHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCc
Confidence 3333321100000000000000000000 0000 0111111111222222334567889999999974344578
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|.+.+.|||+||||++++..+||+|++|++|+++.
T Consensus 153 ~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~ 232 (530)
T PRK15064 153 MSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRV 232 (530)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEE
Confidence 89999999999999999999999999999999999999999999999888999999999999999999999999999977
Q ss_pred ecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCcccc
Q 048654 398 YRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWR 477 (723)
Q Consensus 398 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (723)
+.|++++|............+.++.++++++.......+..... ...... ... .+........ ... +....
T Consensus 233 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~--~~~~~~~~~~-~~~--~~~~~ 303 (530)
T PRK15064 233 YPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA--SKAKQA--TSR--AKQIDKIKLE-EVK--PSSRQ 303 (530)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--hhhHHH--HHH--HHHHhhcccc-ccC--Ccccc
Confidence 88999998765554433333333334433332221100000000 000000 000 0000000000 000 00000
Q ss_pred ccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEEC
Q 048654 478 DYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRS 557 (723)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~ 557 (723)
. ....++......+++|+++||++.|+++ .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.
T Consensus 304 ~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~ 379 (530)
T PRK15064 304 N--PFIRFEQDKKLHRNALEVENLTKGFDNG--PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWS 379 (530)
T ss_pred C--ceeeCCCCCCCCCceEEEEeeEEeeCCc--eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC
Confidence 0 0112222222245799999999999753 48999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 558 QKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 558 ~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
++..++|++|.....+....+....+. .+... ......++.+|+.+|+.....++++.+|||||||||+|||+|+.+
T Consensus 380 ~~~~i~~~~q~~~~~~~~~~t~~~~~~-~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~ 456 (530)
T PRK15064 380 ENANIGYYAQDHAYDFENDLTLFDWMS-QWRQE--GDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQK 456 (530)
T ss_pred CceEEEEEcccccccCCCCCcHHHHHH-HhccC--CccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcC
Confidence 888899999975321211122222221 11111 112456788999999953334577899999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
|+||||||||+|||+.++..|.+.|+++++|||+||||++++..+|| +|++|++|+++.+.|++.++.+.
T Consensus 457 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d-----~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 457 PNVLVMDEPTNHMDMESIESLNMALEKYEGTLIFVSHDREFVSSLAT-----RIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCeEEEcCCCHHHHHHH
Confidence 99999999999999999999999999998899999999999999995 99999999997678888877543
No 9
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-78 Score=700.66 Aligned_cols=520 Identities=27% Similarity=0.411 Sum_probs=359.9
Q ss_pred cceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEE------EEEeeeeecCC-C
Q 048654 164 KDITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNID------VLLVEQEVVGD-D 235 (723)
Q Consensus 164 ~~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~------i~~~~q~~~~~-~ 235 (723)
++|+++||+++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+..|..|.+. +.|+.|+.... .
T Consensus 5 ~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~ 84 (556)
T PRK11819 5 YIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDPE 84 (556)
T ss_pred EEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCC
Confidence 3699999999998 78999999999999999999999999999999999998777665542 44555554322 2
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhh-cCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcccc
Q 048654 236 RSAIQAVVSAHEELVKLREEVASLQ-NSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQ 314 (723)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~ 314 (723)
.+..+++................+. ..... .............+.+.+...+.+....++..+++.+|+. . .
T Consensus 85 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~-~ 157 (556)
T PRK11819 85 KTVRENVEEGVAEVKAALDRFNEIYAAYAEP-----DADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP-P-W 157 (556)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHHHHhccC-----chhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC-c-c
Confidence 2444433211000000000000000 00000 0000000111112222223333334467789999999995 3 4
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++++.+|||||||||+|||||+.+|+|||||||||+||+.++.+|.++|++++.|||+||||++++..+||+|++|++|+
T Consensus 158 ~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~ 237 (556)
T PRK11819 158 DAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGR 237 (556)
T ss_pred cCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCE
Confidence 78999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred EEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCc
Q 048654 395 LHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPK 474 (723)
Q Consensus 395 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (723)
++.|.|+++.|..............++..++++.+.......... .. .. .. . ...+...+.... .....+
T Consensus 238 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~-~~-~---~~~~~~~~~~~~-~~~~~~- 307 (556)
T PRK11819 238 GIPWEGNYSSWLEQKAKRLAQEEKQEAARQKALKRELEWVRQSPK--AR-QA-KS-K---ARLARYEELLSE-EYQKRN- 307 (556)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hh-HH-HH-H---HHHHHHHHhhcc-cccccC-
Confidence 987899999987655433333222232222222221111000000 00 00 00 0 000000000000 000000
Q ss_pred cccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceE
Q 048654 475 KWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEV 554 (723)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I 554 (723)
....+.++.......++|+++||++.|+++ .+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|
T Consensus 308 ----~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i 381 (556)
T PRK11819 308 ----ETNEIFIPPGPRLGDKVIEAENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTI 381 (556)
T ss_pred ----CCceeecCCCCCCCCeEEEEEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEE
Confidence 001122232222245799999999999753 58999999999999999999999999999999999999999999
Q ss_pred EECCceeEEEEccccccccCccccHHHHHHhhCCCCCCC-cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 555 RRSQKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGL-SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 555 ~~~~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
.+.+...+||++|... .+....++.+.+.... ...+. .....++.+|+.||+.....++++.+|||||||||+|||+
T Consensus 382 ~~~~~~~i~~v~q~~~-~~~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~a 459 (556)
T PRK11819 382 KIGETVKLAYVDQSRD-ALDPNKTVWEEISGGL-DIIKVGNREIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKT 459 (556)
T ss_pred EECCceEEEEEeCchh-hcCCCCCHHHHHHhhc-ccccccccHHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHH
Confidence 9866667999999741 1111223332221111 00010 1123456789999996433356789999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEEC-CeEEecCCCHHHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVEN-GTVSRFPGTFEEYKED 712 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~-G~i~~~~g~~~~~~~~ 712 (723)
|+.+|+||||||||+|||+.++..|.++|.++.+|||+||||++++..+|| +|++|++ |++..+.|++++|.+.
T Consensus 460 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d-----~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 460 LKQGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAVVISHDRWFLDRIAT-----HILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCC-----EEEEEECCCeEEEecCCHHHHHHH
Confidence 999999999999999999999999999999998899999999999999995 9999986 8888889999988765
Q ss_pred H
Q 048654 713 L 713 (723)
Q Consensus 713 ~ 713 (723)
.
T Consensus 535 ~ 535 (556)
T PRK11819 535 K 535 (556)
T ss_pred H
Confidence 4
No 10
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.9e-78 Score=695.64 Aligned_cols=520 Identities=28% Similarity=0.407 Sum_probs=360.3
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEE------EEEeeeeecC-CCh
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNID------VLLVEQEVVG-DDR 236 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~------i~~~~q~~~~-~~~ 236 (723)
+|+++||+++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+..|..|.+. |.|+.|.+.. ...
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~~ 83 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDPTK 83 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCCCC
Confidence 689999999998 78899999999999999999999999999999999998777665542 4455555432 223
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccC
Q 048654 237 SAIQAVVSAHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQG 315 (723)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~ 315 (723)
+..+++.............+... ...... ..+..........+.+.+..++.+....++.++++.+|+. . .+
T Consensus 84 tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~-~~ 156 (552)
T TIGR03719 84 TVRENVEEGVAEIKDALDRFNEISAKFAEP-----DADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP-P-WD 156 (552)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHHHHhccC-----chhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC-c-cc
Confidence 44444321100000000000000 000000 0000000001112222333344444556788999999995 3 47
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+++.+|||||||||+|||||+.+|+|||||||||+||+.++.+|.++|++++.|||+||||++++..+||+|++|++|++
T Consensus 157 ~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i 236 (552)
T TIGR03719 157 ADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRG 236 (552)
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEE
Confidence 89999999999999999999999999999999999999999999999999888999999999999999999999999998
Q ss_pred EEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCcc
Q 048654 396 HFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKK 475 (723)
Q Consensus 396 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (723)
+.+.|++++|.+............++.+++++.+........ ... ..+.... . .....+.... .....+
T Consensus 237 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~----~~~~~~~~~~-~~~~~~-- 305 (552)
T TIGR03719 237 IPWEGNYSSWLEQKEKRLEQEEKEESARQKALKRELEWVRSS--PKA-RQAKSKA-R----LARYEELLSQ-EFQKRN-- 305 (552)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhh-HHHHHHH-H----HHHHHhhhhh-cccccC--
Confidence 878899999876554333333333333333332211100000 000 0000000 0 0000000000 000000
Q ss_pred ccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEE
Q 048654 476 WRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVR 555 (723)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~ 555 (723)
....+.++.+.....++|+++|+++.|+++ .+|+||||+|.+|++++|+|||||||||||++|+|+++|++|+|+
T Consensus 306 ---~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~ 380 (552)
T TIGR03719 306 ---ETAEIYIPPGPRLGDKVIEAENLSKGFGDK--LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIK 380 (552)
T ss_pred ---CCceeecCCCCCCCCeEEEEeeEEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEE
Confidence 011122232222246799999999999753 589999999999999999999999999999999999999999999
Q ss_pred ECCceeEEEEccccccccCccccHHHHHHhhCCCCCCC-cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 556 RSQKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGL-SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 556 ~~~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral 634 (723)
+.+...++|++|.... +....++...+..... ..+. .....++.+|+.+||.....++++.+|||||||||+|||+|
T Consensus 381 ~~~~~~i~~v~q~~~~-~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al 458 (552)
T TIGR03719 381 IGETVKLAYVDQSRDA-LDPNKTVWEEISGGLD-IIQLGKREVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTL 458 (552)
T ss_pred ECCceEEEEEeCCccc-cCCCCcHHHHHHhhcc-ccccCcchHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHH
Confidence 8666679999997421 1111233332221111 0011 11234667899999964434567899999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEEC-CeEEecCCCHHHHHHHH
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVEN-GTVSRFPGTFEEYKEDL 713 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~-G~i~~~~g~~~~~~~~~ 713 (723)
+.+|+||||||||+|||+.++..|.++|.++.++||+||||++++..+|| +|++|++ |++..+.|++++|.+..
T Consensus 459 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d-----~i~~l~~~~~~~~~~g~~~~~~~~~ 533 (552)
T TIGR03719 459 KSGGNVLLLDEPTNDLDVETLRALEEALLEFAGCAVVISHDRWFLDRIAT-----HILAFEGDSHVEWFEGNYSEYEEDK 533 (552)
T ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCC-----EEEEEECCCeEEEeCCCHHHHHHHH
Confidence 99999999999999999999999999999998899999999999999995 9999987 68887899998887654
Q ss_pred H
Q 048654 714 Q 714 (723)
Q Consensus 714 ~ 714 (723)
.
T Consensus 534 ~ 534 (552)
T TIGR03719 534 K 534 (552)
T ss_pred H
Confidence 4
No 11
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.3e-78 Score=668.50 Aligned_cols=473 Identities=24% Similarity=0.345 Sum_probs=353.3
Q ss_pred ceEEEeEEEEeCCe----eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC--CcEEEEEeeeeecCCChHH
Q 048654 165 DITIDNFSVAARGK----ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP--KNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 165 ~I~l~nls~~y~~~----~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~--~~~~i~~~~q~~~~~~~~~ 238 (723)
.|+++||++.|... ++++||||+|.+||++||||.|||||||++++|.|+..+.+ ..|+|.|.++++.+.....
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 69999999998532 69999999999999999999999999999999999865432 3688988887665544332
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcccc-CCC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQ-GRP 317 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~-~~~ 317 (723)
...+ ....++++.+.... ...+...++..+.+.+........++..+++.++|+.+||++... +++
T Consensus 85 ~r~~---------rg~~Ia~i~Q~p~~----slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~y 151 (539)
T COG1123 85 MRKL---------RGKRIAMIFQDPMT----SLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRY 151 (539)
T ss_pred HHHh---------ccccEEEEecCchh----hcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccC
Confidence 2111 11223333221111 012234566666665544333346778899999999999986543 369
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++|||||||||+||+||+++|+|||+||||.+||+..+.+|.++|+++ +.++|+||||+..+.++||||+||++|
T Consensus 152 PheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G 231 (539)
T COG1123 152 PHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKG 231 (539)
T ss_pred CcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECC
Confidence 9999999999999999999999999999999999999999999998754 689999999999999999999999999
Q ss_pred EEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCC
Q 048654 394 KLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAP 473 (723)
Q Consensus 394 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (723)
+++.. |+.+++.... ...|.+.+-.. .|
T Consensus 232 ~iVE~-G~~~~i~~~p----------~hpYT~~Ll~a-----------------------------------------~p 259 (539)
T COG1123 232 EIVET-GPTEEILSNP----------QHPYTRGLLAA-----------------------------------------VP 259 (539)
T ss_pred EEEEe-cCHHHHHhcc----------CCcccHHHHhh-----------------------------------------CC
Confidence 99864 7776653311 01111111000 00
Q ss_pred ccccccceeeecCCCCCCCCCeEEEEEEEEEcCCC---------cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHH
Q 048654 474 KKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNR---------EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLA 544 (723)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~---------~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~ 544 (723)
..............+ ....|+++++||++.|..+ ...+++||||+|.+||++||||++|||||||.|+|+
T Consensus 260 ~~~~~~~~~~~~~~~-~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~ 338 (539)
T COG1123 260 RLGDEKIIRLPRRGP-LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILA 338 (539)
T ss_pred Ccccccccccccccc-cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHh
Confidence 000000000000000 1157899999999999741 235799999999999999999999999999999999
Q ss_pred cCCCCCcceEEECCce-------------eEEEEccccccccCccccHHHHH---HhhCCCCCCCcHHHHHHHHHHhCCC
Q 048654 545 GDLSPTEGEVRRSQKL-------------RIGRYSQHFVDLLTMEETPVSYL---LRLHPDQEGLSKQEAVRAKLGKFGL 608 (723)
Q Consensus 545 Gl~~p~~G~I~~~~~~-------------~ig~~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~~gl 608 (723)
|+++|++|.|.+.+.. ++-+++|++...+....++...+ +..+.........+++.++|+.+||
T Consensus 339 gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL 418 (539)
T COG1123 339 GLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGL 418 (539)
T ss_pred CCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCC
Confidence 9999999999987632 46678888655554444432222 2222211111233568889999999
Q ss_pred CCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcC
Q 048654 609 PSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCD 684 (723)
Q Consensus 609 ~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d 684 (723)
+.....+.+.+|||||||||+|||||+.+|+|||+||||+.||+..+..+.++|+++ +.|.|+||||+.++..+||
T Consensus 419 ~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~d 498 (539)
T COG1123 419 PPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIAD 498 (539)
T ss_pred CHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCc
Confidence 875445667999999999999999999999999999999999999999999998776 4699999999999999995
Q ss_pred cCCCcEEEEEECCeEEecCCCHHHH
Q 048654 685 DEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 685 ~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||+||++|+|++. |+.+.+
T Consensus 499 -----rv~vm~~G~iVE~-G~~~~v 517 (539)
T COG1123 499 -----RVAVMYDGRIVEE-GPTEKV 517 (539)
T ss_pred -----eEEEEECCeEEEe-CCHHHH
Confidence 9999999999974 665554
No 12
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-77 Score=679.27 Aligned_cols=459 Identities=20% Similarity=0.268 Sum_probs=333.6
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
++|+++|++++|+++++|+||||+|.+|++++|+||||||||||+++|+|+..|.|..|.|.+.+.++.......
T Consensus 4 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~----- 78 (506)
T PRK13549 4 YLLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRD----- 78 (506)
T ss_pred ceEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH-----
Confidence 369999999999999999999999999999999999999999999999998765346788887776553221110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH--HhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL--QILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
..+..++++.+.... .....+.+++....... ..........++.++++.+|+.. ..++++.+|
T Consensus 79 -------~~~~~i~~v~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 144 (506)
T PRK13549 79 -------TERAGIAIIHQELAL------VKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-NPATPVGNL 144 (506)
T ss_pred -------HHHCCeEEEEecccc------CCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-CcccchhhC
Confidence 011122333221100 00112222221111000 00112234567889999999964 457999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
||||||||+|||||+.+|+||||||||++||+.++.+|.++|.++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 145 SgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~- 223 (506)
T PRK13549 145 GLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIG- 223 (506)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEee-
Confidence 999999999999999999999999999999999999999998765 5799999999999999999999999999864
Q ss_pred cCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccc
Q 048654 399 RGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRD 478 (723)
Q Consensus 399 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (723)
.|+.+++... .. ++.. .+. . .. ...+.
T Consensus 224 ~~~~~~~~~~------~~----------~~~~--~~~-----------------------~---~~-----~~~~~---- 250 (506)
T PRK13549 224 TRPAAGMTED------DI----------ITMM--VGR-----------------------E---LT-----ALYPR---- 250 (506)
T ss_pred ecccccCCHH------HH----------HHHh--hCc-----------------------C---cc-----ccccc----
Confidence 4665444210 00 0000 000 0 00 00000
Q ss_pred cceeeecCCCCCCCCCeEEEEEEEEEcCC-CcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-CCcceEEE
Q 048654 479 YSVEFHFPEPTELTPPLLQLIEVSFSYPN-REDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-PTEGEVRR 556 (723)
Q Consensus 479 ~~~~~~~~~~~~~~~~~l~~~~ls~~y~~-~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-p~~G~I~~ 556 (723)
+ +.....++|+++||++.|+. ....+|+||||+|++|++++|+||||||||||+++|+|+++ |++|+|.+
T Consensus 251 -------~-~~~~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~ 322 (506)
T PRK13549 251 -------E-PHTIGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFI 322 (506)
T ss_pred -------c-ccCCCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEE
Confidence 0 00113568999999999952 12358999999999999999999999999999999999998 59999998
Q ss_pred CCc------------eeEEEEccccc-----cccCccccHHHHHHhhCCC---CCCCcHHHHHHHHHHhCCCCCCCCcCC
Q 048654 557 SQK------------LRIGRYSQHFV-----DLLTMEETPVSYLLRLHPD---QEGLSKQEAVRAKLGKFGLPSHNHLTP 616 (723)
Q Consensus 557 ~~~------------~~ig~~~q~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~~gl~~~~~~~~ 616 (723)
+++ ..++|++|... ..+++.++........+.. .......+.+.++|+.|++.....+++
T Consensus 323 ~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 402 (506)
T PRK13549 323 DGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELA 402 (506)
T ss_pred CCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccc
Confidence 652 23899999742 2233333321110000100 000012345788999999963334577
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEE
Q 048654 617 IAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWV 693 (723)
Q Consensus 617 i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~v 693 (723)
+.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++.++|| ++++
T Consensus 403 ~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d-----~v~~ 477 (506)
T PRK13549 403 IARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSD-----RVLV 477 (506)
T ss_pred cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCC-----EEEE
Confidence 8999999999999999999999999999999999999999999998876 4689999999999999995 9999
Q ss_pred EECCeEEecCCCHHHH
Q 048654 694 VENGTVSRFPGTFEEY 709 (723)
Q Consensus 694 l~~G~i~~~~g~~~~~ 709 (723)
|++|+|+ +.|+++++
T Consensus 478 l~~G~i~-~~~~~~~~ 492 (506)
T PRK13549 478 MHEGKLK-GDLINHNL 492 (506)
T ss_pred EECCEEE-EEeccccC
Confidence 9999997 45677666
No 13
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.8e-76 Score=675.18 Aligned_cols=462 Identities=23% Similarity=0.333 Sum_probs=331.0
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEee----------eeec---
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVE----------QEVV--- 232 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~----------q~~~--- 232 (723)
|+++|++++|+++++|+|+||+|.+|++++|+|||||||||||++|+|+....|..|+|.+.+ |...
T Consensus 1 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~ 80 (520)
T TIGR03269 1 IEVKNLTKKFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGE 80 (520)
T ss_pred CEEEEEEEEECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccc
Confidence 578999999998899999999999999999999999999999999999852124456665531 1000
Q ss_pred -----CCChHH-HHHHHH-hhHHHHHHHHHHHhhhcC-cCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 048654 233 -----GDDRSA-IQAVVS-AHEELVKLREEVASLQNS-TSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKIL 304 (723)
Q Consensus 233 -----~~~~~~-~~~~~~-~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L 304 (723)
+.+... ...+.. .......++..++++.+. ... .....+.+.+...+.. ..........++.++|
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~------~~~~tv~~~l~~~~~~-~~~~~~~~~~~~~~~l 153 (520)
T TIGR03269 81 PCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFAL------YGDDTVLDNVLEALEE-IGYEGKEAVGRAVDLI 153 (520)
T ss_pred ccccccccccccchhhhccCHHHHHHhhhcEEEEecccccc------CCCCCHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 000000 000000 000111122333333321 100 0111223333222111 1122334457889999
Q ss_pred HhCCCCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHH
Q 048654 305 AGLGFTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFL 380 (723)
Q Consensus 305 ~~lgl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l 380 (723)
+.+|+.. ..++++.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++
T Consensus 154 ~~~gl~~-~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~ 232 (520)
T TIGR03269 154 EMVQLSH-RITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVI 232 (520)
T ss_pred HHcCChh-hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHH
Confidence 9999964 457899999999999999999999999999999999999999999998888654 57999999999999
Q ss_pred HhhCCEEEEEeCCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhcc
Q 048654 381 NTVCTEIIHLHDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAK 460 (723)
Q Consensus 381 ~~iad~Ii~L~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (723)
..+||+|++|++|+++. .|+++++..... .... .
T Consensus 233 ~~~~d~i~~l~~G~i~~-~g~~~~~~~~~~-----------------~~~~----------------~------------ 266 (520)
T TIGR03269 233 EDLSDKAIWLENGEIKE-EGTPDEVVAVFM-----------------EGVS----------------E------------ 266 (520)
T ss_pred HHhcCEEEEEeCCEEee-ecCHHHHHHHHH-----------------hhch----------------h------------
Confidence 99999999999999864 577765521100 0000 0
Q ss_pred CcccCCCCCCCCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCC---CcccceeceEEEEecCcEEEEEcCCCCcHH
Q 048654 461 GKVDEDEPLPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPN---REDFKLSDVDVGIDMGTRVAIVGPNGAGKS 537 (723)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~---~~~~~L~~isl~i~~Ge~vaIvGpNGsGKS 537 (723)
.. .. .+.....++|+++||++.|++ ....+|+|+||+|.+|++++|+||||||||
T Consensus 267 --~~-------~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKS 324 (520)
T TIGR03269 267 --VE-------KE-------------CEVEVGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKT 324 (520)
T ss_pred --hc-------cc-------------cccCCCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHH
Confidence 00 00 000013468999999999953 223589999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcceEEEC-Cc-----------------eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHH
Q 048654 538 TLLNLLAGDLSPTEGEVRRS-QK-----------------LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQE 597 (723)
Q Consensus 538 TLlk~L~Gl~~p~~G~I~~~-~~-----------------~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (723)
||+++|+|+++|++|+|.++ +. .+++|++|... ..+++.++.... ... .........
T Consensus 325 TLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~-~~~--~~~~~~~~~ 401 (520)
T TIGR03269 325 TLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEA-IGL--ELPDELARM 401 (520)
T ss_pred HHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHH-HHc--CCCHHHHHH
Confidence 99999999999999999884 21 24899999742 223333332111 111 100001234
Q ss_pred HHHHHHHhCCCCCC----CCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceE
Q 048654 598 AVRAKLGKFGLPSH----NHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGV 669 (723)
Q Consensus 598 ~~~~~L~~~gl~~~----~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tV 669 (723)
.+.++|+.+||... ..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|+++ +.||
T Consensus 402 ~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tv 481 (520)
T TIGR03269 402 KAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTF 481 (520)
T ss_pred HHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEE
Confidence 57789999999742 235678999999999999999999999999999999999999999999999654 4689
Q ss_pred EEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 670 VLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 670 IivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
|+||||++++..+|| +|++|++|+++ +.|+++++.+.
T Consensus 482 i~vsHd~~~~~~~~d-----~i~~l~~G~i~-~~g~~~~~~~~ 518 (520)
T TIGR03269 482 IIVSHDMDFVLDVCD-----RAALMRDGKIV-KIGDPEEIVEE 518 (520)
T ss_pred EEEeCCHHHHHHhCC-----EEEEEECCEEE-EECCHHHHHhh
Confidence 999999999999995 99999999997 45777776543
No 14
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=7.8e-76 Score=674.56 Aligned_cols=465 Identities=22% Similarity=0.341 Sum_probs=334.1
Q ss_pred cceEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCCh
Q 048654 164 KDITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDR 236 (723)
Q Consensus 164 ~~I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~ 236 (723)
++|+++|++++|++ +++|+||||+|.+|+++||+|||||||||||++|+|+..|. +..|+|.+.+..+.....
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 83 (529)
T PRK15134 4 PLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASE 83 (529)
T ss_pred ceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCH
Confidence 36999999999963 68999999999999999999999999999999999987653 257888877766532221
Q ss_pred HHHHHHHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcc--c
Q 048654 237 SAIQAVVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKE--M 313 (723)
Q Consensus 237 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~--~ 313 (723)
... ..++ ..++++.+..... ......+.+.+.................++.++|+.+|+... .
T Consensus 84 ~~~----------~~~~~~~ig~v~Q~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (529)
T PRK15134 84 QTL----------RGVRGNKIAMIFQEPMVS----LNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKR 149 (529)
T ss_pred HHH----------HHHhcCceEEEecCchhh----cCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH
Confidence 110 0111 1233332211000 000111112221111100112233456788999999999641 3
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEE
Q 048654 314 QGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIH 389 (723)
Q Consensus 314 ~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~ 389 (723)
.++++.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++
T Consensus 150 ~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~ 229 (529)
T PRK15134 150 LTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAV 229 (529)
T ss_pred HhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEE
Confidence 47899999999999999999999999999999999999999999999999763 67999999999999999999999
Q ss_pred EeCCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCC
Q 048654 390 LHDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPL 469 (723)
Q Consensus 390 L~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (723)
|++|+++.+ |+..++...... . +... +. . . ..
T Consensus 230 l~~G~i~~~-g~~~~~~~~~~~---~-------~~~~---------------~~----~---~------~~--------- 261 (529)
T PRK15134 230 MQNGRCVEQ-NRAATLFSAPTH---P-------YTQK---------------LL----N---S------EP--------- 261 (529)
T ss_pred EECCEEEEe-CCHHHHhhCCCC---H-------HHHH---------------HH----H---h------Cc---------
Confidence 999999744 665444210000 0 0000 00 0 0 00
Q ss_pred CCCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCC---------cccceeceEEEEecCcEEEEEcCCCCcHHHHH
Q 048654 470 PEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNR---------EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLL 540 (723)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~---------~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLl 540 (723)
...+ .+.+ ....++|+++|+++.|+.. ...+|++|||+|.+|++++|+||||||||||+
T Consensus 262 ~~~~-----------~~~~-~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl 329 (529)
T PRK15134 262 SGDP-----------VPLP-EPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTG 329 (529)
T ss_pred cccc-----------cccC-CCCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHH
Confidence 0000 0000 1135689999999999621 23589999999999999999999999999999
Q ss_pred HHHHcCCCCCcceEEECCc--------------eeEEEEccccc----cccCccccHHHHHHhhCCC-CCCCcHHHHHHH
Q 048654 541 NLLAGDLSPTEGEVRRSQK--------------LRIGRYSQHFV----DLLTMEETPVSYLLRLHPD-QEGLSKQEAVRA 601 (723)
Q Consensus 541 k~L~Gl~~p~~G~I~~~~~--------------~~ig~~~q~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 601 (723)
++|+|+++ ++|+|++++. ..++|++|... ..+++.++.... ...+.. .........+.+
T Consensus 330 k~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~~ 407 (529)
T PRK15134 330 LALLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEG-LRVHQPTLSAAQREQQVIA 407 (529)
T ss_pred HHHhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHH-HHhccccCChHHHHHHHHH
Confidence 99999985 8999998762 24899999742 223333332211 111110 000112346788
Q ss_pred HHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHH
Q 048654 602 KLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSR 677 (723)
Q Consensus 602 ~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~ 677 (723)
+|+.|||.....++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++
T Consensus 408 ~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~ 487 (529)
T PRK15134 408 VMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH 487 (529)
T ss_pred HHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH
Confidence 9999999633335678999999999999999999999999999999999999999999999865 468999999999
Q ss_pred HHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 678 LISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 678 ~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
++..+|| +|++|++|+|+. .|+++++.
T Consensus 488 ~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 514 (529)
T PRK15134 488 VVRALCH-----QVIVLRQGEVVE-QGDCERVF 514 (529)
T ss_pred HHHHhcC-----eEEEEECCEEEE-EcCHHHHh
Confidence 9999995 999999999974 57777764
No 15
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-75 Score=679.61 Aligned_cols=499 Identities=19% Similarity=0.248 Sum_probs=337.8
Q ss_pred ccceEEEeEEEEeC----CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHH
Q 048654 163 VKDITIDNFSVAAR----GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 163 ~~~I~l~nls~~y~----~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~ 238 (723)
.++|+++||++.|+ +.++|+||||+|.+|+++||||+||||||||+++|+|++.| ..|.|.+.+..+.+.....
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p--~~G~i~~~g~~~~~~~~~~ 87 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQ--AGGLVQCDKMLLRRRSRQV 87 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCC--CCeEEEECCEEeccccccc
Confidence 34699999999996 35799999999999999999999999999999999998755 4556655444331110000
Q ss_pred HHHHHH-hhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc--ccc
Q 048654 239 IQAVVS-AHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK--EMQ 314 (723)
Q Consensus 239 ~~~~~~-~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~--~~~ 314 (723)
. .+.. .......++ ..++++.+.... .......+.+++.........+.......++.++|+.+||.. ...
T Consensus 88 ~-~~~~~~~~~~~~~r~~~ig~v~Q~~~~----~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~ 162 (623)
T PRK10261 88 I-ELSEQSAAQMRHVRGADMAMIFQEPMT----SLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTIL 162 (623)
T ss_pred c-ccccCCHHHHHHHhCCCEEEEEeCchh----hcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHH
Confidence 0 0000 000111111 123333321100 000112334444332221112233455678999999999953 235
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEE
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHL 390 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L 390 (723)
++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl 242 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 242 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEe
Confidence 7899999999999999999999999999999999999999999888888754 679999999999999999999999
Q ss_pred eCCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCC
Q 048654 391 HDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLP 470 (723)
Q Consensus 391 ~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (723)
++|+++. .|+++++..... ..|.+.+... ..... . . .... .....+..
T Consensus 243 ~~G~i~~-~g~~~~~~~~~~----------~~~~~~l~~~---~~~~~-~-~---------------~~~~-~~~~~~~~ 290 (623)
T PRK10261 243 YQGEAVE-TGSVEQIFHAPQ----------HPYTRALLAA---VPQLG-A-M---------------KGLD-YPRRFPLI 290 (623)
T ss_pred eCCeecc-cCCHHHhhcCCC----------Chhhhhhhhc---cCccc-c-c---------------cccc-CCcccccc
Confidence 9999974 577766532100 0000000000 00000 0 0 0000 00000000
Q ss_pred C-CCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCC---------cccceeceEEEEecCcEEEEEcCCCCcHHHHH
Q 048654 471 E-APKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNR---------EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLL 540 (723)
Q Consensus 471 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~---------~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLl 540 (723)
. ....... ...++.......++|+++||++.|+.. ...+|+||||+|.+|++++|+|+||||||||+
T Consensus 291 ~~~~~~~~~---~~~~~~~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLl 367 (623)
T PRK10261 291 SLEHPAKQE---PPIEQDTVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTG 367 (623)
T ss_pred ccccccccC---cccccccccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHH
Confidence 0 0000000 000111111235799999999999621 13589999999999999999999999999999
Q ss_pred HHHHcCCCCCcceEEECCc--------------eeEEEEccccc----cccCccccHHHHHHhhCCCCCCCcHHHHHHHH
Q 048654 541 NLLAGDLSPTEGEVRRSQK--------------LRIGRYSQHFV----DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAK 602 (723)
Q Consensus 541 k~L~Gl~~p~~G~I~~~~~--------------~~ig~~~q~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (723)
++|+|+++|++|+|++++. ..++|++|+.. ..+++.++.... +..............+.++
T Consensus 368 k~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~-~~~~~~~~~~~~~~~~~~~ 446 (623)
T PRK10261 368 RALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEP-LRVHGLLPGKAAAARVAWL 446 (623)
T ss_pred HHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHH-HHHcCCCCHHHHHHHHHHH
Confidence 9999999999999998663 24899999742 222333332211 1111100000123567889
Q ss_pred HHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHH
Q 048654 603 LGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRL 678 (723)
Q Consensus 603 L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~ 678 (723)
|+.+||.....++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||+++
T Consensus 447 L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~ 526 (623)
T PRK10261 447 LERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAV 526 (623)
T ss_pred HHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 999999633334677999999999999999999999999999999999999999999999664 4689999999999
Q ss_pred HHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 679 ISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 679 ~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+..+|| ||++|++|+|+. .|+++++.
T Consensus 527 v~~~~d-----ri~vl~~G~iv~-~g~~~~i~ 552 (623)
T PRK10261 527 VERISH-----RVAVMYLGQIVE-IGPRRAVF 552 (623)
T ss_pred HHHhCC-----EEEEEECCEEEE-ecCHHHHh
Confidence 999995 999999999975 57776653
No 16
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.9e-75 Score=667.35 Aligned_cols=459 Identities=19% Similarity=0.298 Sum_probs=328.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++|++++|+++++|+||||+|++|++++|+||||||||||+++|+|+..|.|.+|.|.+.++.+.......
T Consensus 1 ~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~------ 74 (500)
T TIGR02633 1 LLEMKGIVKTFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRD------ 74 (500)
T ss_pred CEEEEeEEEEeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH------
Confidence 37899999999999999999999999999999999999999999999998654345788887776653222110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH-H--hcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL-Q--ILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~--~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
..+..++++.+.... .....+.+++....... . .........++.++++.+|+.....++++.+|
T Consensus 75 ------~~~~~i~~v~q~~~~------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~L 142 (500)
T TIGR02633 75 ------TERAGIVIIHQELTL------VPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDY 142 (500)
T ss_pred ------HHhCCEEEEeecccc------CCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhC
Confidence 001112222221100 00112222221111000 0 01122345678899999999643335789999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+++.+
T Consensus 143 SgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~ 222 (500)
T TIGR02633 143 GGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVAT 222 (500)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeee
Confidence 999999999999999999999999999999999999999998764 57999999999999999999999999998743
Q ss_pred cCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccc
Q 048654 399 RGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRD 478 (723)
Q Consensus 399 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (723)
++...+... .. ..... + .. . . ...+.
T Consensus 223 -~~~~~~~~~------~~----------~~~~~--~-----------------------~~---~----~-~~~~~---- 248 (500)
T TIGR02633 223 -KDMSTMSED------DI----------ITMMV--G-----------------------RE---I----T-SLYPH---- 248 (500)
T ss_pred -cCcccCCHH------HH----------HHHHh--C-----------------------cc---c----c-ccccc----
Confidence 444332110 00 00000 0 00 0 0 00000
Q ss_pred cceeeecCCCCCCCCCeEEEEEEEEEcCCC-cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-CcceEEE
Q 048654 479 YSVEFHFPEPTELTPPLLQLIEVSFSYPNR-EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-TEGEVRR 556 (723)
Q Consensus 479 ~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~-~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-~~G~I~~ 556 (723)
.+....+++|+++|+++.|++. ...+|+|+||+|.+|++++|+|||||||||||++|+|+++| ++|+|.+
T Consensus 249 --------~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~ 320 (500)
T TIGR02633 249 --------EPHEIGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFI 320 (500)
T ss_pred --------cccCCCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEE
Confidence 0001134689999999999421 23589999999999999999999999999999999999995 8999998
Q ss_pred CCc------------eeEEEEccccc-----cccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCC
Q 048654 557 SQK------------LRIGRYSQHFV-----DLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTP 616 (723)
Q Consensus 557 ~~~------------~~ig~~~q~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~ 616 (723)
+++ ..++|++|.+. ..+++.++................ ....+.++|+.|++.....+++
T Consensus 321 ~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 400 (500)
T TIGR02633 321 NGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLP 400 (500)
T ss_pred CCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCc
Confidence 652 24799999742 122222221110000010000111 2345788999999964334578
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEE
Q 048654 617 IAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWV 693 (723)
Q Consensus 617 i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~v 693 (723)
+.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++
T Consensus 401 ~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d-----~v~~ 475 (500)
T TIGR02633 401 IGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSD-----RVLV 475 (500)
T ss_pred cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC-----EEEE
Confidence 8999999999999999999999999999999999999999999888776 4689999999999999995 9999
Q ss_pred EECCeEEecCCCHHHH
Q 048654 694 VENGTVSRFPGTFEEY 709 (723)
Q Consensus 694 l~~G~i~~~~g~~~~~ 709 (723)
|++|+|+. ..+..++
T Consensus 476 l~~G~i~~-~~~~~~~ 490 (500)
T TIGR02633 476 IGEGKLKG-DFVNHAL 490 (500)
T ss_pred EECCEEEE-EEccccC
Confidence 99999974 3443443
No 17
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-75 Score=665.24 Aligned_cols=450 Identities=19% Similarity=0.263 Sum_probs=326.3
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
++|+++|++++|+++++|+|+||+|++|+++||+|||||||||||++|+|+..| ..|+|.+.+.++........
T Consensus 4 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~---- 77 (510)
T PRK09700 4 PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINYNKLDHKLA---- 77 (510)
T ss_pred ceEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEECCCCCHHHH----
Confidence 369999999999999999999999999999999999999999999999998654 45677776665532221100
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH---HHh---cCchHHHHHHHHHHHhCCCCccccCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK---LQI---LGSDAAEAQASKILAGLGFTKEMQGRP 317 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~---~~~~~~~~~~~~~L~~lgl~~~~~~~~ 317 (723)
.+..++++.+.... .....+.+.+...... ... ........++.++|+.+|+.. ..+++
T Consensus 78 --------~~~~i~~v~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~ 142 (510)
T PRK09700 78 --------AQLGIGIIYQELSV------IDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-DLDEK 142 (510)
T ss_pred --------HHCCeEEEeecccc------cCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-Ccccc
Confidence 01112222221100 0011122222110000 000 011234567889999999974 45899
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 143 ~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~ 222 (510)
T PRK09700 143 VANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGS 222 (510)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999998765 5799999999999999999999999999
Q ss_pred EEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCc
Q 048654 395 LHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPK 474 (723)
Q Consensus 395 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (723)
++ +.|+++++... .. .+.. .+.. ... .. +.
T Consensus 223 i~-~~g~~~~~~~~------~~----------~~~~--~~~~--------------------------~~~--~~---~~ 252 (510)
T PRK09700 223 SV-CSGMVSDVSND------DI----------VRLM--VGRE--------------------------LQN--RF---NA 252 (510)
T ss_pred Ee-eecchhhCCHH------HH----------HHHh--cCCC--------------------------ccc--cc---cc
Confidence 96 56777655311 00 0000 0000 000 00 00
Q ss_pred cccccceeeecCC-CCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcce
Q 048654 475 KWRDYSVEFHFPE-PTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGE 553 (723)
Q Consensus 475 ~~~~~~~~~~~~~-~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~ 553 (723)
. .+. .....+++|+++|+++.|+ .+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+
T Consensus 253 ~---------~~~~~~~~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~ 319 (510)
T PRK09700 253 M---------KENVSNLAHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGE 319 (510)
T ss_pred c---------ccccccCCCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCe
Confidence 0 000 0011356899999999763 2799999999999999999999999999999999999999999
Q ss_pred EEECCc------------eeEEEEccccc-cccCccccHHHHHHhh-C------CCCCCC----cHHHHHHHHHHhCCCC
Q 048654 554 VRRSQK------------LRIGRYSQHFV-DLLTMEETPVSYLLRL-H------PDQEGL----SKQEAVRAKLGKFGLP 609 (723)
Q Consensus 554 I~~~~~------------~~ig~~~q~~~-~~~~~~~~~~~~~~~~-~------~~~~~~----~~~~~~~~~L~~~gl~ 609 (723)
|++++. ..++|++|... ..+....++...+... . ....+. .....+.++|+.|||.
T Consensus 320 I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 399 (510)
T PRK09700 320 IRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALK 399 (510)
T ss_pred EEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCC
Confidence 998662 24899999631 1111112222222110 0 000010 1224577899999996
Q ss_pred CCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcC
Q 048654 610 SHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDE 686 (723)
Q Consensus 610 ~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~ 686 (723)
....++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+||
T Consensus 400 ~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d-- 477 (510)
T PRK09700 400 CHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCD-- 477 (510)
T ss_pred CCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCC--
Confidence 33345788999999999999999999999999999999999999999999999876 4689999999999999995
Q ss_pred CCcEEEEEECCeEEec
Q 048654 687 ERSEIWVVENGTVSRF 702 (723)
Q Consensus 687 ~~drv~vl~~G~i~~~ 702 (723)
+|++|++|+|+..
T Consensus 478 ---~i~~l~~G~i~~~ 490 (510)
T PRK09700 478 ---RIAVFCEGRLTQI 490 (510)
T ss_pred ---EEEEEECCEEEEE
Confidence 9999999999753
No 18
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=8.5e-75 Score=662.71 Aligned_cols=454 Identities=18% Similarity=0.233 Sum_probs=328.3
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|.|.+.+..+........
T Consensus 11 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~----- 83 (510)
T PRK15439 11 LLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPCARLTPAKA----- 83 (510)
T ss_pred eEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHH-----
Confidence 69999999999999999999999999999999999999999999999998654 56677776655432221110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
....++++.+.... .....+.+++.... ........++.++++.+|+.. ..++++.+||||
T Consensus 84 -------~~~~i~~v~q~~~~------~~~~tv~e~l~~~~-----~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG 144 (510)
T PRK15439 84 -------HQLGIYLVPQEPLL------FPNLSVKENILFGL-----PKRQASMQKMKQLLAALGCQL-DLDSSAGSLEVA 144 (510)
T ss_pred -------HhCCEEEEeccCcc------CCCCcHHHHhhccc-----ccchHHHHHHHHHHHHcCCCc-cccCChhhCCHH
Confidence 00112222221100 01112222221110 011234567889999999974 457999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+
T Consensus 145 ~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~-~~g~ 223 (510)
T PRK15439 145 DRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIA-LSGK 223 (510)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecC
Confidence 999999999999999999999999999999999999998765 579999999999999999999999999996 4688
Q ss_pred hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccccce
Q 048654 402 FDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDYSV 481 (723)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (723)
++++.... . ++... +.... . .... ... .
T Consensus 224 ~~~~~~~~------~----------~~~~~--~~~~~-------------------~---~~~~-------~~~-----~ 251 (510)
T PRK15439 224 TADLSTDD------I----------IQAIT--PAARE-------------------K---SLSA-------SQK-----L 251 (510)
T ss_pred hHHcCHHH------H----------HHHHh--Ccccc-------------------c---cccc-------ccc-----c
Confidence 76653210 0 00000 00000 0 0000 000 0
Q ss_pred eeecCC---CCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECC
Q 048654 482 EFHFPE---PTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQ 558 (723)
Q Consensus 482 ~~~~~~---~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~ 558 (723)
.+.++. +....+++|+++|+++ . +|++|||+|++|++++|+||||||||||+++|+|+++|++|+|.+++
T Consensus 252 ~~~~~~~~~~~~~~~~~l~~~~l~~--~-----~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g 324 (510)
T PRK15439 252 WLELPGNRRQQAAGAPVLTVEDLTG--E-----GFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNG 324 (510)
T ss_pred cccccccccccCCCCceEEEeCCCC--C-----CccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECC
Confidence 000110 1112456899999983 1 58999999999999999999999999999999999999999999876
Q ss_pred c------------eeEEEEccccc-cccCccccHHHHHHhh----CCCC-CCCcHHHHHHHHHHhCCCCCCCCcCCCCCC
Q 048654 559 K------------LRIGRYSQHFV-DLLTMEETPVSYLLRL----HPDQ-EGLSKQEAVRAKLGKFGLPSHNHLTPIAKL 620 (723)
Q Consensus 559 ~------------~~ig~~~q~~~-~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~L~~~gl~~~~~~~~i~~L 620 (723)
. ..++|++|.+. ..+....+....+... .... ......+.+.++|+.|||.....++++.+|
T Consensus 325 ~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~L 404 (510)
T PRK15439 325 KEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAARTL 404 (510)
T ss_pred EECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCccccC
Confidence 3 24899998632 1111111222221110 0000 001123457789999999633345778999
Q ss_pred CHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECC
Q 048654 621 SGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENG 697 (723)
Q Consensus 621 SGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G 697 (723)
||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++.++|| ++++|++|
T Consensus 405 SgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d-----~i~~l~~G 479 (510)
T PRK15439 405 SGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMAD-----RVLVMHQG 479 (510)
T ss_pred CcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC-----EEEEEECC
Confidence 999999999999999999999999999999999999999999876 4689999999999999995 99999999
Q ss_pred eEEecCCCHHHHH
Q 048654 698 TVSRFPGTFEEYK 710 (723)
Q Consensus 698 ~i~~~~g~~~~~~ 710 (723)
+|+. .|+++++.
T Consensus 480 ~i~~-~~~~~~~~ 491 (510)
T PRK15439 480 EISG-ALTGAAIN 491 (510)
T ss_pred EEEE-EEccccCC
Confidence 9974 56665543
No 19
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.1e-74 Score=656.21 Aligned_cols=449 Identities=22% Similarity=0.300 Sum_probs=325.0
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++|+++++|+|+||+|.+|+++||+|||||||||||++|+|+..| ..|.|.+.+.++........
T Consensus 4 ~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~----- 76 (501)
T PRK10762 4 LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVTFNGPKSS----- 76 (501)
T ss_pred eEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCHHHH-----
Confidence 59999999999999999999999999999999999999999999999998755 45667766665432211100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH---HhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL---QILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
.+..++++.+.... .....+.+++....... ..........++.++++.+|+.. ..++++.+|
T Consensus 77 -------~~~~i~~v~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 142 (501)
T PRK10762 77 -------QEAGIGIIHQELNL------IPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-SSDKLVGEL 142 (501)
T ss_pred -------HhCCEEEEEcchhc------cCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-CccCchhhC
Confidence 01112222211000 00112222221111000 00112234567889999999974 457899999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 143 SgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~- 221 (501)
T PRK10762 143 SIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIA- 221 (501)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-
Confidence 999999999999999999999999999999999999999888764 5799999999999999999999999999964
Q ss_pred cCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccc
Q 048654 399 RGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRD 478 (723)
Q Consensus 399 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (723)
.|+.+++... .. .+.. .+. ... ...+.
T Consensus 222 ~~~~~~~~~~------~~----------~~~~--~~~--------------------------~~~-----~~~~~---- 248 (501)
T PRK10762 222 EREVADLTED------SL----------IEMM--VGR--------------------------KLE-----DQYPR---- 248 (501)
T ss_pred ecCcCcCCHH------HH----------HHHh--cCC--------------------------Ccc-----ccccc----
Confidence 4555443110 00 0000 000 000 00000
Q ss_pred cceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECC
Q 048654 479 YSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQ 558 (723)
Q Consensus 479 ~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~ 558 (723)
++. ....++|+++|+++ .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++
T Consensus 249 ------~~~--~~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g 313 (501)
T PRK10762 249 ------LDK--APGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDG 313 (501)
T ss_pred ------ccc--CCCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECC
Confidence 000 11346899999984 259999999999999999999999999999999999999999999876
Q ss_pred c------------eeEEEEccccc-----cccCccccHHHHHHhhCCCCCC-C---cHHHHHHHHHHhCCCCCCCCcCCC
Q 048654 559 K------------LRIGRYSQHFV-----DLLTMEETPVSYLLRLHPDQEG-L---SKQEAVRAKLGKFGLPSHNHLTPI 617 (723)
Q Consensus 559 ~------------~~ig~~~q~~~-----~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~L~~~gl~~~~~~~~i 617 (723)
. ..++|++|... ..+++.++.............+ . ...+.++++|+.|||.....++++
T Consensus 314 ~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 393 (501)
T PRK10762 314 HEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI 393 (501)
T ss_pred EECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch
Confidence 2 24899999742 2223332221100000000000 1 123457889999999533345788
Q ss_pred CCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEE
Q 048654 618 AKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVV 694 (723)
Q Consensus 618 ~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl 694 (723)
.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|
T Consensus 394 ~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d-----~v~~l 468 (501)
T PRK10762 394 GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSD-----RILVM 468 (501)
T ss_pred hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCC-----EEEEE
Confidence 9999999999999999999999999999999999999999999998873 589999999999999995 99999
Q ss_pred ECCeEEecCCCHHHH
Q 048654 695 ENGTVSRFPGTFEEY 709 (723)
Q Consensus 695 ~~G~i~~~~g~~~~~ 709 (723)
++|+|+. .|+++++
T Consensus 469 ~~G~i~~-~~~~~~~ 482 (501)
T PRK10762 469 HEGRISG-EFTREQA 482 (501)
T ss_pred ECCEEEE-EeccccC
Confidence 9999974 4565554
No 20
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.9e-74 Score=654.16 Aligned_cols=455 Identities=24% Similarity=0.284 Sum_probs=321.5
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++|+++++|+|+||+|.+|++++|+|||||||||||++|+|+..| .+|.|.+.++.+.......
T Consensus 3 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p--~~G~i~~~~~~~~~~~~~~------ 74 (490)
T PRK10938 3 SLQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPL--LSGERQSQFSHITRLSFEQ------ 74 (490)
T ss_pred eEEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCceEEECCcccccCCHHH------
Confidence 59999999999988899999999999999999999999999999999998655 4456655444332111110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
++..++++.+....... ... ..... ..+.+.+. . ......++.++++.+|+.+ ..++++.+||||
T Consensus 75 -------~~~~i~~~~q~~~~~~~-~~~-~~~~~---~~~~~~~~-~-~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG 139 (490)
T PRK10938 75 -------LQKLVSDEWQRNNTDML-SPG-EDDTG---RTTAEIIQ-D-EVKDPARCEQLAQQFGITA-LLDRRFKYLSTG 139 (490)
T ss_pred -------HHHHhceeccCcchhhc-ccc-hhhcc---ccHHHhcc-c-chhHHHHHHHHHHHcCCHh-hhhCCcccCCHH
Confidence 11122222211000000 000 00000 00111110 0 1123567889999999964 458999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++. .|+
T Consensus 140 ~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~ 218 (490)
T PRK10938 140 ETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAE-TGE 218 (490)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEE-eCC
Confidence 999999999999999999999999999999999999999876 5799999999999999999999999999974 466
Q ss_pred hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccccce
Q 048654 402 FDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDYSV 481 (723)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (723)
++++.... .+..... . ..+... +.+.... .
T Consensus 219 ~~~~~~~~----------------~~~~~~~---------------~------------~~~~~~-~~~~~~~----~-- 248 (490)
T PRK10938 219 REEILQQA----------------LVAQLAH---------------S------------EQLEGV-QLPEPDE----P-- 248 (490)
T ss_pred HHHHhcch----------------hhhhhhh---------------h------------hccCcc-ccCcccc----c--
Confidence 55442110 0000000 0 000000 0000000 0
Q ss_pred eeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-CcceEEECCc-
Q 048654 482 EFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-TEGEVRRSQK- 559 (723)
Q Consensus 482 ~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-~~G~I~~~~~- 559 (723)
..+.......++|+++|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+.+| ++|+|+++++
T Consensus 249 --~~~~~~~~~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~ 324 (490)
T PRK10938 249 --SARHALPANEPRIVLNNGVVSYNDR--PILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRR 324 (490)
T ss_pred --ccccccCCCCceEEEeceEEEECCe--eEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEeccc
Confidence 0000001235789999999999753 489999999999999999999999999999999998876 6999988652
Q ss_pred -----------eeEEEEccccccccCccccHHHHHHh-hCC--CC-CCCc--HHHHHHHHHHhCCCCCCCCcCCCCCCCH
Q 048654 560 -----------LRIGRYSQHFVDLLTMEETPVSYLLR-LHP--DQ-EGLS--KQEAVRAKLGKFGLPSHNHLTPIAKLSG 622 (723)
Q Consensus 560 -----------~~ig~~~q~~~~~~~~~~~~~~~~~~-~~~--~~-~~~~--~~~~~~~~L~~~gl~~~~~~~~i~~LSG 622 (723)
..++|++|..........+....... ... .. .... ..+.+.++++.+||.....++++.+|||
T Consensus 325 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSg 404 (490)
T PRK10938 325 RGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTADAPFHSLSW 404 (490)
T ss_pred CCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhccCchhhCCH
Confidence 23789998642111111111111111 010 00 0011 2346788999999975234577899999
Q ss_pred HHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHh-cCcCCCcEEEEEECC
Q 048654 623 GQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRV-CDDEERSEIWVVENG 697 (723)
Q Consensus 623 GqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~-~d~~~~drv~vl~~G 697 (723)
||||||+|||||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+ | |++++|++|
T Consensus 405 Gq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~-----d~v~~l~~G 479 (490)
T PRK10938 405 GQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACIT-----HRLEFVPDG 479 (490)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhh-----eeEEEecCC
Confidence 99999999999999999999999999999999999999998873 3699999999999874 6 599999999
Q ss_pred eEEec
Q 048654 698 TVSRF 702 (723)
Q Consensus 698 ~i~~~ 702 (723)
+|+.+
T Consensus 480 ~i~~~ 484 (490)
T PRK10938 480 DIYRY 484 (490)
T ss_pred ceEEe
Confidence 98754
No 21
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-74 Score=654.00 Aligned_cols=453 Identities=22% Similarity=0.262 Sum_probs=323.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
++|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|.|.+.++.+.......
T Consensus 3 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i~~~~~~~----- 75 (501)
T PRK11288 3 PYLSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEMRFASTTA----- 75 (501)
T ss_pred ceEEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECCCCCHHH-----
Confidence 469999999999999999999999999999999999999999999999998755 4566766666543211100
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHH-HH-HhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYE-KL-QILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l-~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
.++..++++.+.... .....+.+++..... .. ..........++.++|+.+|+.. ..++++.+|
T Consensus 76 -------~~~~~i~~v~q~~~~------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 141 (501)
T PRK11288 76 -------ALAAGVAIIYQELHL------VPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDI-DPDTPLKYL 141 (501)
T ss_pred -------HHhCCEEEEEechhc------cCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCC-CcCCchhhC
Confidence 011122222221100 001112222221100 00 00122344567889999999974 457899999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+++..
T Consensus 142 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~ 221 (501)
T PRK11288 142 SIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVAT 221 (501)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEee
Confidence 999999999999999999999999999999999999999999865 57999999999999999999999999998632
Q ss_pred cCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccc
Q 048654 399 RGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRD 478 (723)
Q Consensus 399 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (723)
...+.... . ..+ .+.. .+ ... . ... .
T Consensus 222 ~~~~~~~~--~----~~~----------~~~~--~~-----------------------~~~---------~-~~~---~ 247 (501)
T PRK11288 222 FDDMAQVD--R----DQL----------VQAM--VG-----------------------REI---------G-DIY---G 247 (501)
T ss_pred cCccccCC--H----HHH----------HHHh--cC-----------------------CCc---------c-ccc---c
Confidence 11111100 0 000 0000 00 000 0 000 0
Q ss_pred cceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECC
Q 048654 479 YSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQ 558 (723)
Q Consensus 479 ~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~ 558 (723)
. .+....+++++++|+++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|++++
T Consensus 248 ------~-~~~~~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g 314 (501)
T PRK11288 248 ------Y-RPRPLGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDG 314 (501)
T ss_pred ------c-cccCCCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECC
Confidence 0 011113457999999842 279999999999999999999999999999999999999999999875
Q ss_pred c------------eeEEEEccccc-cccCccccHHHHHHhh-CCC--CCC----C-cHHHHHHHHHHhCCCCCCCCcCCC
Q 048654 559 K------------LRIGRYSQHFV-DLLTMEETPVSYLLRL-HPD--QEG----L-SKQEAVRAKLGKFGLPSHNHLTPI 617 (723)
Q Consensus 559 ~------------~~ig~~~q~~~-~~~~~~~~~~~~~~~~-~~~--~~~----~-~~~~~~~~~L~~~gl~~~~~~~~i 617 (723)
+ ..++|++|... ..+....+....+... ... ..+ . ...+.+.++|+.|++.....++++
T Consensus 315 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 394 (501)
T PRK11288 315 KPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI 394 (501)
T ss_pred EECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc
Confidence 3 24789998642 1111112222221110 000 000 0 112457889999999533445788
Q ss_pred CCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEE
Q 048654 618 AKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVV 694 (723)
Q Consensus 618 ~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl 694 (723)
.+|||||||||+|||||+.+|+||||||||+|||+.++..|.++|.++ +.|||+||||++++..+|| ++++|
T Consensus 395 ~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d-----~i~~l 469 (501)
T PRK11288 395 MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVAD-----RIVVM 469 (501)
T ss_pred ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCC-----EEEEE
Confidence 999999999999999999999999999999999999999999998765 4699999999999999995 99999
Q ss_pred ECCeEEecCCCHHHHH
Q 048654 695 ENGTVSRFPGTFEEYK 710 (723)
Q Consensus 695 ~~G~i~~~~g~~~~~~ 710 (723)
++|+++. .|+.+++.
T Consensus 470 ~~g~i~~-~~~~~~~~ 484 (501)
T PRK11288 470 REGRIAG-ELAREQAT 484 (501)
T ss_pred ECCEEEE-EEccccCC
Confidence 9999974 56666654
No 22
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-73 Score=650.13 Aligned_cols=449 Identities=19% Similarity=0.258 Sum_probs=322.5
Q ss_pred EEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhH
Q 048654 168 IDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHE 247 (723)
Q Consensus 168 l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~ 247 (723)
++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| .+|.|.+.++.+.......
T Consensus 1 ~~nl~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~--------- 69 (491)
T PRK10982 1 MSNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKE--------- 69 (491)
T ss_pred CCceEEEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHH---------
Confidence 36899999999999999999999999999999999999999999998654 5677777766553221110
Q ss_pred HHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHh--cCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 248 ELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQI--LGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 248 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
.++..++++.+.... .....+.+++......... ........++.++++.+|+.. ..++++.+|||||
T Consensus 70 ---~~~~~i~~v~q~~~~------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGq 139 (491)
T PRK10982 70 ---ALENGISMVHQELNL------VLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDI-DPRAKVATLSVSQ 139 (491)
T ss_pred ---HHhCCEEEEeccccc------ccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCC-CccCchhhCCHHH
Confidence 011112222221100 0011222222111000000 112233467889999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCCh
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNF 402 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~ 402 (723)
||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+++. .|+.
T Consensus 140 ~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~ 218 (491)
T PRK10982 140 MQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIA-TQPL 218 (491)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEe-ecCh
Confidence 99999999999999999999999999999999999998764 5799999999999999999999999999964 4554
Q ss_pred hhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCcccccccee
Q 048654 403 DDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDYSVE 482 (723)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (723)
+++... .. ..... +. ... .
T Consensus 219 ~~~~~~------~~----------~~~~~--~~--------------------------~~~--------~--------- 237 (491)
T PRK10982 219 AGLTMD------KI----------IAMMV--GR--------------------------SLT--------Q--------- 237 (491)
T ss_pred hhCCHH------HH----------HHHHh--CC--------------------------Ccc--------c---------
Confidence 433110 00 00000 00 000 0
Q ss_pred eecCC-CCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce-
Q 048654 483 FHFPE-PTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL- 560 (723)
Q Consensus 483 ~~~~~-~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~- 560 (723)
.++. .....+++|+++|+++.|. .+|++|||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 238 -~~~~~~~~~~~~~i~~~~l~~~~~----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i 312 (491)
T PRK10982 238 -RFPDKENKPGEVILEVRNLTSLRQ----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKI 312 (491)
T ss_pred -ccccccCCCCCcEEEEeCcccccC----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEEC
Confidence 0000 0011346899999999752 38999999999999999999999999999999999999999999987631
Q ss_pred -----------eEEEEccccc-----cccCcccc-HHHHHHhhCCC---CCCCcHHHHHHHHHHhCCCCCCCCcCCCCCC
Q 048654 561 -----------RIGRYSQHFV-----DLLTMEET-PVSYLLRLHPD---QEGLSKQEAVRAKLGKFGLPSHNHLTPIAKL 620 (723)
Q Consensus 561 -----------~ig~~~q~~~-----~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~L 620 (723)
.++|++|... ..+++.++ ....+...... .........++.+++.+++.....++++.+|
T Consensus 313 ~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~L 392 (491)
T PRK10982 313 NNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSL 392 (491)
T ss_pred CCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccccC
Confidence 2788888631 22222111 11111111110 0001123457889999999643345788999
Q ss_pred CHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECC
Q 048654 621 SGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENG 697 (723)
Q Consensus 621 SGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G 697 (723)
||||||||+||||++.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| |+++|++|
T Consensus 393 SgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d-----~v~~l~~g 467 (491)
T PRK10982 393 SGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITD-----RILVMSNG 467 (491)
T ss_pred CcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCC-----EEEEEECC
Confidence 999999999999999999999999999999999999999998665 5799999999999999995 99999999
Q ss_pred eEEecCCCHHHHH
Q 048654 698 TVSRFPGTFEEYK 710 (723)
Q Consensus 698 ~i~~~~g~~~~~~ 710 (723)
+++.+ ++.+.|.
T Consensus 468 ~i~~~-~~~~~~~ 479 (491)
T PRK10982 468 LVAGI-VDTKTTT 479 (491)
T ss_pred EEEEE-EccccCC
Confidence 99843 4444444
No 23
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-71 Score=581.92 Aligned_cols=466 Identities=24% Similarity=0.349 Sum_probs=357.1
Q ss_pred ccceEEEeEEEEeC----CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCC
Q 048654 163 VKDITIDNFSVAAR----GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDD 235 (723)
Q Consensus 163 ~~~I~l~nls~~y~----~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~ 235 (723)
.+.|.++|+++.|. ...++++|||+|.+||.+||||.||||||-..+.|+|++.. ...++.|.|.+.++....
T Consensus 4 ~~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~s 83 (534)
T COG4172 4 MPLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAAS 83 (534)
T ss_pred CcceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCC
Confidence 45799999999995 57899999999999999999999999999999999997543 123468888887765443
Q ss_pred hHHHHHHHHhhHHHHHHHH-HHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc--
Q 048654 236 RSAIQAVVSAHEELVKLRE-EVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK-- 311 (723)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~-- 311 (723)
...+. .++. .++++ +..+. ...+...++..+.+....-..+...++++++.++|+.+|+.+
T Consensus 84 e~~lr----------~iRG~~I~MIFQEPMt-----SLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~ 148 (534)
T COG4172 84 ERQLR----------GVRGNKIGMIFQEPMT-----SLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPE 148 (534)
T ss_pred HHHHh----------hhcccceEEEeccccc-----ccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchh
Confidence 33222 2221 12222 22211 112344667777777766666777888999999999999964
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEE
Q 048654 312 EMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEI 387 (723)
Q Consensus 312 ~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~I 387 (723)
...+.++++|||||||||+||.||+++|+|||.||||.+||..-+.+|.++|+++ +.++++||||+..+..+||||
T Consensus 149 ~rl~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV 228 (534)
T COG4172 149 KRLDAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRV 228 (534)
T ss_pred hhhhhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhE
Confidence 3457899999999999999999999999999999999999999999998888754 789999999999999999999
Q ss_pred EEEeCCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCC
Q 048654 388 IHLHDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDE 467 (723)
Q Consensus 388 i~L~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (723)
+||.+|+++. .|..+.+... ....|.+.+-.+
T Consensus 229 ~VM~~G~ivE-~~~t~~lF~~----------PqHpYTr~Ll~a------------------------------------- 260 (534)
T COG4172 229 YVMQHGEIVE-TGTTETLFAA----------PQHPYTRKLLAA------------------------------------- 260 (534)
T ss_pred EEEeccEEee-cCcHHHHhhC----------CCChHHHHHHhc-------------------------------------
Confidence 9999999975 4655443221 001111111100
Q ss_pred CCCCCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCCc---------ccceeceEEEEecCcEEEEEcCCCCcHHH
Q 048654 468 PLPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRE---------DFKLSDVDVGIDMGTRVAIVGPNGAGKST 538 (723)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~---------~~~L~~isl~i~~Ge~vaIvGpNGsGKST 538 (723)
.|.. ..+......+++|+.++|.+.|+-+. ..++++|||++++|+.+||||.+||||||
T Consensus 261 ----eP~g--------~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsT 328 (534)
T COG4172 261 ----EPSG--------DPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKST 328 (534)
T ss_pred ----CCCC--------CCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcch
Confidence 0100 00011123568999999999986321 24689999999999999999999999999
Q ss_pred HHHHHHcCCCCCcceEEECCc--------------eeEEEEccccccccCccccHHHH---HHhhC-CCCCCCcHHHHHH
Q 048654 539 LLNLLAGDLSPTEGEVRRSQK--------------LRIGRYSQHFVDLLTMEETPVSY---LLRLH-PDQEGLSKQEAVR 600 (723)
Q Consensus 539 Llk~L~Gl~~p~~G~I~~~~~--------------~~ig~~~q~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~ 600 (723)
|-.+|.+++++. |.|++.+. .++-.+||+++..+...-++.+. -+..+ +........+++.
T Consensus 329 lG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~ 407 (534)
T COG4172 329 LGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVI 407 (534)
T ss_pred HHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHH
Confidence 999999999987 99998763 24677899876665544443221 12222 2222223456788
Q ss_pred HHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCH
Q 048654 601 AKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDS 676 (723)
Q Consensus 601 ~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~ 676 (723)
+.|..+||+....++.+.+.|||||||++||||++.+|.+++|||||++||..-+..+.++|+.+. -+-++||||+
T Consensus 408 ~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL 487 (534)
T COG4172 408 EALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDL 487 (534)
T ss_pred HHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccH
Confidence 999999999877778889999999999999999999999999999999999999999999998874 4899999999
Q ss_pred HHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 677 RLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 677 ~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
..+..+|+ +|+||.+|+|++ .|+.+++.
T Consensus 488 ~VvrAl~~-----~viVm~~GkiVE-~G~~~~if 515 (534)
T COG4172 488 AVVRALCH-----RVIVMRDGKIVE-QGPTEAVF 515 (534)
T ss_pred HHHHHhhc-----eEEEEeCCEEee-eCCHHHHh
Confidence 99999995 999999999996 46666543
No 24
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=7.4e-68 Score=610.81 Aligned_cols=440 Identities=25% Similarity=0.311 Sum_probs=303.2
Q ss_pred eEEEEeCCe-eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHH
Q 048654 170 NFSVAARGK-ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEE 248 (723)
Q Consensus 170 nls~~y~~~-~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~ 248 (723)
+++++|+++ .+|++++ .+++|+++||+|||||||||||++|+|+..|.. |+|.. .+ .. ...+..+-+ .+
T Consensus 78 ~~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~--G~i~~---~~-~~-~~~~~~~~G--~~ 147 (590)
T PRK13409 78 EPVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNL--GDYEE---EP-SW-DEVLKRFRG--TE 147 (590)
T ss_pred CceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCC--ccccC---CC-cH-HHHHHHhCC--hH
Confidence 488999874 6999999 899999999999999999999999999876654 44431 00 00 000000000 01
Q ss_pred HHHHHHHH-------HhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 249 LVKLREEV-------ASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 249 ~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
.......+ ....+... .... ..... +.+.+. ......++.++++.+||.. ..++++.+|
T Consensus 148 l~~~~~~~~~~~~~~~~~~q~~~------~~p~-~~~~t---v~e~l~---~~~~~~~~~~~l~~l~l~~-~~~~~~~~L 213 (590)
T PRK13409 148 LQNYFKKLYNGEIKVVHKPQYVD------LIPK-VFKGK---VRELLK---KVDERGKLDEVVERLGLEN-ILDRDISEL 213 (590)
T ss_pred HHHHHHHHhccCcceeecccchh------hhhh-hhcch---HHHHHH---hhhHHHHHHHHHHHcCCch-hhcCChhhC
Confidence 11111100 00000000 0000 00001 111111 1123457889999999974 458999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||||||+||+||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|+++.
T Consensus 214 SgGe~qrv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----- 288 (590)
T PRK13409 214 SGGELQRVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----- 288 (590)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc-----
Confidence 999999999999999999999999999999999999999999877 7899999999999999999999998642
Q ss_pred CChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCcccccc
Q 048654 400 GNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDY 479 (723)
Q Consensus 400 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (723)
|.|..+...... +...+. +... .. ..... ... ..
T Consensus 289 g~~g~~~~~~~~-~~~i~~----~~~~------~~---~~e~~-------------------~~~-------------~~ 322 (590)
T PRK13409 289 GAYGVVSKPKGV-RVGINE----YLKG------YL---PEENM-------------------RIR-------------PE 322 (590)
T ss_pred cccceecchhHH-HHhHHH----HHHh------cc---hhhhh-------------------hcc-------------cc
Confidence 111111111000 000000 0000 00 00000 000 00
Q ss_pred ceeeecCCCC--CCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEEC
Q 048654 480 SVEFHFPEPT--ELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRS 557 (723)
Q Consensus 480 ~~~~~~~~~~--~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~ 557 (723)
...+.++.+. ....++|+++|+++.|++. .|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~ls~~~~~~---~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~ 399 (590)
T PRK13409 323 PIEFEERPPRDESERETLVEYPDLTKKLGDF---SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE 399 (590)
T ss_pred CcceecCCCccccCCceEEEEcceEEEECCE---EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe
Confidence 0011111111 1245789999999999752 4899999999999999999999999999999999999999999886
Q ss_pred CceeEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 558 QKLRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 558 ~~~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
..++|++|+.... ...++.+.+...... . .....+.++|+.|+|... .++++.+|||||||||+|||||+.+
T Consensus 400 --~~i~y~~Q~~~~~--~~~tv~e~l~~~~~~-~--~~~~~~~~~L~~l~l~~~-~~~~~~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 400 --LKISYKPQYIKPD--YDGTVEDLLRSITDD-L--GSSYYKSEIIKPLQLERL-LDKNVKDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred --eeEEEecccccCC--CCCcHHHHHHHHhhh-c--ChHHHHHHHHHHCCCHHH-HhCCcccCCHHHHHHHHHHHHHhcC
Confidence 5799999975321 122322222211111 1 122356789999999754 4578899999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| ||++|++ ++..
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aD-----rvivl~~-~~~~ 533 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISD-----RLMVFEG-EPGK 533 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCC-----EEEEEcC-ccee
Confidence 9999999999999999999999999887 4699999999999999995 9999964 6643
No 25
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.4e-66 Score=568.01 Aligned_cols=443 Identities=22% Similarity=0.321 Sum_probs=333.1
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHH-HHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA-IQA 241 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~-~~~ 241 (723)
.+.++++|++|+|++.++|++|||+|.+||++||+|.||||||||+|+|+|.+.| ++|+|.+.++.+...+... ...
T Consensus 6 ~~ll~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p--~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 6 PPLLELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPP--DSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred cceeeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccC--CCceEEECCEEccCCCHHHHHhC
Confidence 3469999999999999999999999999999999999999999999999998764 5667777777665433321 111
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH---HHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK---LQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
.+ ..++|+++.+++. .+.+++....+. +..+++.....++.++|+.+|+... .+.++
T Consensus 84 GI------~~V~QEl~L~p~L-------------sVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-~~~~v 143 (500)
T COG1129 84 GI------ATVHQELSLVPNL-------------SVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-PDTLV 143 (500)
T ss_pred Cc------EEEeechhccCCc-------------cHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-hhhhh
Confidence 11 1122333333332 222222111111 2234556778899999999998634 57899
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
.+||+||||.|+|||||..+++||||||||++|+......|+++++++ |.+||+|||+++++..+||||.||++|++
T Consensus 144 ~~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~ 223 (500)
T COG1129 144 GDLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRV 223 (500)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999988865 67999999999999999999999999998
Q ss_pred EEecCC-hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCc
Q 048654 396 HFYRGN-FDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPK 474 (723)
Q Consensus 396 ~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (723)
+.. .+ ..++... ++.+ .. .++ .+.
T Consensus 224 v~~-~~~~~~~~~~------~lv~----------~M--vGr--------------------------~~~---------- 248 (500)
T COG1129 224 VGT-RPTAAETSED------ELVR----------LM--VGR--------------------------ELE---------- 248 (500)
T ss_pred eee-cccccCCCHH------HHHH----------Hh--hCc--------------------------chh----------
Confidence 632 33 1222110 0000 00 000 000
Q ss_pred cccccceeeecC--CCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcc
Q 048654 475 KWRDYSVEFHFP--EPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEG 552 (723)
Q Consensus 475 ~~~~~~~~~~~~--~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G 552 (723)
..|| ......+++++++|++..- .++|+||++++|||+||.|-=|||+|-|+++|.|..++.+|
T Consensus 249 --------~~~~~~~~~~~~~~~l~v~~l~~~~------~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G 314 (500)
T COG1129 249 --------DLFPEPPEEGIGEPVLEVRNLSGGG------KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSG 314 (500)
T ss_pred --------hhcccccccCCCCcEEEEecCCCCC------ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCc
Confidence 0011 0012356789999998531 47899999999999999999999999999999999999999
Q ss_pred eEEECCce------------eEEEEccccc-----cccCccccHHHHHHhhCC-C-CCC-CcHHHHHHHHHHhCCCCCCC
Q 048654 553 EVRRSQKL------------RIGRYSQHFV-----DLLTMEETPVSYLLRLHP-D-QEG-LSKQEAVRAKLGKFGLPSHN 612 (723)
Q Consensus 553 ~I~~~~~~------------~ig~~~q~~~-----~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~L~~~gl~~~~ 612 (723)
+|.++++. .++|++-+.. ..+++.+|.....+..+. . ... ....+.++.+...+++....
T Consensus 315 ~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s 394 (500)
T COG1129 315 EILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPS 394 (500)
T ss_pred eEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCC
Confidence 99998852 4788876432 223333332211111111 1 111 11234578899999998877
Q ss_pred CcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCc
Q 048654 613 HLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERS 689 (723)
Q Consensus 613 ~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~d 689 (723)
...++.+||||+||||.|||+|+.+|+||||||||.|+|+.++..|+++|+++. .+|||||.++.++..+||
T Consensus 395 ~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~D----- 469 (500)
T COG1129 395 PEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSD----- 469 (500)
T ss_pred ccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCC-----
Confidence 778999999999999999999999999999999999999999999999999884 589999999999999995
Q ss_pred EEEEEECCeEEe
Q 048654 690 EIWVVENGTVSR 701 (723)
Q Consensus 690 rv~vl~~G~i~~ 701 (723)
||+||++|+|+.
T Consensus 470 RIlVm~~Gri~~ 481 (500)
T COG1129 470 RILVMREGRIVG 481 (500)
T ss_pred EEEEEECCEEEE
Confidence 999999999985
No 26
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-63 Score=580.86 Aligned_cols=247 Identities=26% Similarity=0.348 Sum_probs=178.3
Q ss_pred HHhhhhhcccccccccCccccccCCccccCCccceEEEeEEEEeCCe---eeeEeeeEEEeCCcEEEEECCCCccHHHHH
Q 048654 132 KEALRDDHDAFTVVIGSRTSVLEGQDDADANVKDITIDNFSVAARGK---ELLKSTSVRISHGKRYGLVGPNGMGKSTLL 208 (723)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~l~nls~~y~~~---~vL~~isl~i~~Ge~~~LvG~NGsGKSTLl 208 (723)
...+++.+++.+.+++... .+. ........|+++||+|+|+.+ ++|+|+||.|++|+.++|||||||||||++
T Consensus 321 a~~I~~~i~~~~~i~~~~~---~~~-~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i 396 (1228)
T KOG0055|consen 321 AYRIFETIDRKPSIDPYSK---GGR-VLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLI 396 (1228)
T ss_pred hHHHHHHhcCCCCCCcccc---cCC-cccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHH
Confidence 3568899999998877762 222 224455689999999999876 599999999999999999999999999999
Q ss_pred HHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH-
Q 048654 209 KLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK- 287 (723)
Q Consensus 209 k~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (723)
++|.|++.|. .|+|.+.+.++...+.. .++..++.+.+.... ....+.+++....+.
T Consensus 397 ~LL~RfydP~--~G~V~idG~di~~~~~~-------------~lr~~iglV~QePvl-------F~~tI~eNI~~G~~da 454 (1228)
T KOG0055|consen 397 QLLARFYDPT--SGEVLIDGEDIRNLNLK-------------WLRSQIGLVSQEPVL-------FATTIRENIRYGKPDA 454 (1228)
T ss_pred HHHHHhcCCC--CceEEEcCccchhcchH-------------HHHhhcCeeeechhh-------hcccHHHHHhcCCCcc
Confidence 9999998765 55666665554433222 234444444332111 011112221110000
Q ss_pred -HHhcCchHHHHHHHHHHHhC--CCCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh
Q 048654 288 -LQILGSDAAEAQASKILAGL--GFTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLC 364 (723)
Q Consensus 288 -l~~~~~~~~~~~~~~~L~~l--gl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~ 364 (723)
...+......+.+.+++..+ |+.... .....+|||||||||||||||+.+|+||||||||++||+.+...+++.|.
T Consensus 455 t~~~i~~a~k~ana~~fi~~lp~g~~T~v-ge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd 533 (1228)
T KOG0055|consen 455 TREEIEEAAKAANAHDFILKLPDGYDTLV-GERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALD 533 (1228)
T ss_pred cHHHHHHHHHHccHHHHHHhhHHhhcccc-cCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHH
Confidence 00000111123456666665 665433 56667899999999999999999999999999999999999999999998
Q ss_pred hc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChhhHHh
Q 048654 365 RW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFDDFES 407 (723)
Q Consensus 365 ~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~~~~~ 407 (723)
+. ++|.|+|+|+++.+.+ ||+|++|++|+|++ .|+.+++..
T Consensus 534 ~~~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE-~G~h~ELi~ 576 (1228)
T KOG0055|consen 534 KASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVE-QGTHDELIA 576 (1228)
T ss_pred HhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEEE-ecCHHHHHh
Confidence 76 6799999999999999 99999999999975 588777654
No 27
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.4e-60 Score=514.54 Aligned_cols=454 Identities=23% Similarity=0.297 Sum_probs=337.7
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChH-HHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRS-AIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~-~~~~~~ 243 (723)
.|++++++|.|++..+++||||+|.+||++||+|.|||||||||++|.|++.| ++|+|.+.++++...+.. +...-+
T Consensus 4 ~l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P--~~GeI~v~G~~v~~~sP~dA~~~GI 81 (501)
T COG3845 4 ALEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQP--DSGEIRVDGKEVRIKSPRDAIRLGI 81 (501)
T ss_pred eEEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccC--CcceEEECCEEeccCCHHHHHHcCC
Confidence 58999999999999999999999999999999999999999999999998765 566778888877644332 222222
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH--HHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK--LQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
+...++..+.+.++. .+++.-..+. ...++.....+++.++.+++||.-+. ++++..|
T Consensus 82 GMVhQHF~Lv~~lTV-------------------~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp-~~~V~dL 141 (501)
T COG3845 82 GMVHQHFMLVPTLTV-------------------AENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDP-DAKVADL 141 (501)
T ss_pred cEEeeccccccccch-------------------hhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCc-cceeecC
Confidence 222222222222222 2222211111 11234556788999999999997554 7999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|-|+||||.|-+||+++|+||||||||+.|-|...+.|+..|+++ |+|||+|||.++++..+|||+.||+.|+++
T Consensus 142 sVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvv-- 219 (501)
T COG3845 142 SVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVV-- 219 (501)
T ss_pred CcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEE--
Confidence 999999999999999999999999999999999999999998865 789999999999999999999999999975
Q ss_pred cCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccc
Q 048654 399 RGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRD 478 (723)
Q Consensus 399 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (723)
|.++...+.-.. .+..+. .+. . ..
T Consensus 220 -gt~~~~~~~t~~--------------ela~lM-vG~-------------------------~----------v~----- 243 (501)
T COG3845 220 -GTVDPVAETTEE--------------ELAELM-VGR-------------------------E----------VV----- 243 (501)
T ss_pred -eeecCCCCCCHH--------------HHHHHh-cCC-------------------------c----------cc-----
Confidence 333311100000 000000 000 0 00
Q ss_pred cceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECC
Q 048654 479 YSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQ 558 (723)
Q Consensus 479 ~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~ 558 (723)
.... + .+..+++++|+++++++.-. +....+++|||+|+.|||+||.|-.|.|.+.|+.+|+|+.+|.+|+|.+++
T Consensus 244 ~~~~--~-~~~~pg~~vL~V~~L~v~~~-~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G 319 (501)
T COG3845 244 LRVV--K-PPSTPGEVVLEVEDLSVKDR-RGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNG 319 (501)
T ss_pred cccc--c-CCCCCCCeEEEEeeeEeecC-CCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECC
Confidence 0000 1 12234578999999998654 234579999999999999999999999999999999999999999999887
Q ss_pred ce-------------eEEEEcccc-----ccccCccccHHHHHHhhCC-CCCCCc----HHHHHHHHHHhCCCCCCCCcC
Q 048654 559 KL-------------RIGRYSQHF-----VDLLTMEETPVSYLLRLHP-DQEGLS----KQEAVRAKLGKFGLPSHNHLT 615 (723)
Q Consensus 559 ~~-------------~ig~~~q~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~L~~~gl~~~~~~~ 615 (723)
.. .++|+|.+. ...+++.+|.+.......+ ...++- ....++++++.|++.......
T Consensus 320 ~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~ 399 (501)
T COG3845 320 KDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA 399 (501)
T ss_pred EeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCc
Confidence 53 367777643 1223333443222111000 001111 234467889999998666667
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEE
Q 048654 616 PIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIW 692 (723)
Q Consensus 616 ~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~ 692 (723)
|+.+||||++||+.+||-|..+|++||+.+||.|||..+.+.+.+.|.+.. .+|++||-|++++..+|| ||+
T Consensus 400 ~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsD-----rIa 474 (501)
T COG3845 400 PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSD-----RIA 474 (501)
T ss_pred chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhh-----eee
Confidence 889999999999999999999999999999999999999999999987763 579999999999999995 999
Q ss_pred EEECCeEEecCCCHHH
Q 048654 693 VVENGTVSRFPGTFEE 708 (723)
Q Consensus 693 vl~~G~i~~~~g~~~~ 708 (723)
||.+|+|+. ..++++
T Consensus 475 Vi~~Gri~~-~~~~~~ 489 (501)
T COG3845 475 VIYEGRIVG-IVPPEE 489 (501)
T ss_pred eeeCCceec-cccccc
Confidence 999999973 344443
No 28
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.2e-56 Score=560.48 Aligned_cols=211 Identities=27% Similarity=0.373 Sum_probs=172.9
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIG 563 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig 563 (723)
.+|+++||++.|+++...+|+||||+|.+||++||+||||||||||+|+|+|+++|++|+|++++. ..+|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~IG 2015 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMG 2015 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhEE
Confidence 479999999999753346899999999999999999999999999999999999999999998763 2489
Q ss_pred EEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
|++|.. .+.+++.++...+ ...... ......+.+..+|+.+||.... ++++.+|||||||||+||+||+.+|+||
T Consensus 2016 y~pQ~~~L~~~LTv~E~L~l~-a~l~g~-~~~~~~~~v~~lLe~lgL~~~~-dk~~~~LSGGqKqRLslA~ALi~~P~VL 2092 (2272)
T TIGR01257 2016 YCPQFDAIDDLLTGREHLYLY-ARLRGV-PAEEIEKVANWSIQSLGLSLYA-DRLAGTYSGGNKRKLSTAIALIGCPPLV 2092 (2272)
T ss_pred EEeccccCCCCCCHHHHHHHH-HHhcCC-CHHHHHHHHHHHHHHcCCHHHh-cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999963 3344555443221 111111 0001234567889999997654 4678999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKEDL 713 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~~ 713 (723)
||||||+|||+.+++.+.+.|.++ +.|||++||+++++..+|| ||++|.+|+++ ..|++++++.++
T Consensus 2093 LLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcD-----rV~IL~~G~i~-~~Gs~q~Lk~~~ 2161 (2272)
T TIGR01257 2093 LLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCT-----RLAIMVKGAFQ-CLGTIQHLKSKF 2161 (2272)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEE-EECCHHHHHHHh
Confidence 999999999999999999999886 3589999999999999995 99999999997 468988876654
No 29
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.5e-57 Score=568.45 Aligned_cols=202 Identities=22% Similarity=0.284 Sum_probs=162.1
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
.-|+++||+|+|++...++|+||||+|++||+|||||++|||||||+++|.|+++|++|+|.+++. .++
T Consensus 1236 g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~I 1315 (1622)
T PLN03130 1236 GSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVL 1315 (1622)
T ss_pred CcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhcc
Confidence 369999999999754346999999999999999999999999999999999999999999998873 368
Q ss_pred EEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC-----------CCCcCCCCCCCHHHHHHHHHH
Q 048654 563 GRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS-----------HNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 563 g~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-----------~~~~~~i~~LSGGqkqRv~lA 631 (723)
++++|+..- ...++...+ ..+.. ...+++.++|+..++.+ ... .....||||||||++||
T Consensus 1316 siVpQdp~L---F~GTIreNL-d~~~~----~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vg-e~G~nLSgGQrQrlaLA 1386 (1622)
T PLN03130 1316 GIIPQAPVL---FSGTVRFNL-DPFNE----HNDADLWESLERAHLKDVIRRNSLGLDAEVS-EAGENFSVGQRQLLSLA 1386 (1622)
T ss_pred EEECCCCcc---ccccHHHHh-CcCCC----CCHHHHHHHHHHcCcHHHHHhCccccCcccc-CCCCCCCHHHHHHHHHH
Confidence 999997531 122322222 22111 13455666666655521 111 12347999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|||+++|+||||||||++||.++...|.+.|++. +.|||+|+|+++.+.. | |+|+||++|+|+++ |+++++
T Consensus 1387 RALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~-~-----DrIlVLd~G~IvE~-Gt~~eL 1459 (1622)
T PLN03130 1387 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-C-----DRILVLDAGRVVEF-DTPENL 1459 (1622)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh-C-----CEEEEEECCEEEEe-CCHHHH
Confidence 9999999999999999999999999999999876 3699999999999975 5 59999999999875 888887
Q ss_pred HH
Q 048654 710 KE 711 (723)
Q Consensus 710 ~~ 711 (723)
.+
T Consensus 1460 l~ 1461 (1622)
T PLN03130 1460 LS 1461 (1622)
T ss_pred Hh
Confidence 54
No 30
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.8e-57 Score=569.46 Aligned_cols=202 Identities=19% Similarity=0.251 Sum_probs=161.8
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
.|+++||+|+|++...++|+||||+|++||++||||++|||||||+++|.|+++|++|+|.+++. .+++
T Consensus 1234 ~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1313 (1495)
T PLN03232 1234 SIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLS 1313 (1495)
T ss_pred cEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcE
Confidence 59999999999654346999999999999999999999999999999999999999999998873 3589
Q ss_pred EEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCC-------C---cCCCCCCCHHHHHHHHHHHH
Q 048654 564 RYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHN-------H---LTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 564 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~-------~---~~~i~~LSGGqkqRv~lAra 633 (723)
+++|+..- ...+....+ ..+.. ...+++.++++..++.+.. . ......||||||||++||||
T Consensus 1314 iVpQdp~L---F~gTIr~NL-~~~~~----~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARA 1385 (1495)
T PLN03232 1314 IIPQSPVL---FSGTVRFNI-DPFSE----HNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARA 1385 (1495)
T ss_pred EECCCCee---eCccHHHHc-CCCCC----CCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHH
Confidence 99997531 122322222 22211 1345566666666553211 1 11235799999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+++|+||||||||++||.++...|.+.|++. +.|||+|+|+++.+.. | |+|+||++|+|+++ |+++++.+
T Consensus 1386 LLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~-----DrIlVL~~G~ivE~-Gt~~eLl~ 1458 (1495)
T PLN03232 1386 LLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIID-C-----DKILVLSSGQVLEY-DSPQELLS 1458 (1495)
T ss_pred HHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHh-C-----CEEEEEECCEEEEE-CCHHHHHh
Confidence 99999999999999999999999999999886 3699999999999975 5 59999999999875 88888753
No 31
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.3e-56 Score=556.63 Aligned_cols=204 Identities=25% Similarity=0.305 Sum_probs=159.9
Q ss_pred eEEEEEEEEEcCCCc-ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC------------------------
Q 048654 495 LLQLIEVSFSYPNRE-DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP------------------------ 549 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~-~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p------------------------ 549 (723)
-|+++||+|+|++++ .++|+|+||+|++|+++|||||||||||||+++|.|++.|
T Consensus 1165 ~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~ 1244 (1466)
T PTZ00265 1165 KIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQG 1244 (1466)
T ss_pred eEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccc
Confidence 499999999997542 4689999999999999999999999999999999999998
Q ss_pred ------------------------------CcceEEECCc-----------eeEEEEccccccccCccccHHHHHHhhCC
Q 048654 550 ------------------------------TEGEVRRSQK-----------LRIGRYSQHFVDLLTMEETPVSYLLRLHP 588 (723)
Q Consensus 550 ------------------------------~~G~I~~~~~-----------~~ig~~~q~~~~~~~~~~~~~~~~~~~~~ 588 (723)
++|+|.+++. ..++|++|+..- ...++.+.+....+
T Consensus 1245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~L---F~gTIreNI~~g~~ 1321 (1466)
T PTZ00265 1245 DEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPML---FNMSIYENIKFGKE 1321 (1466)
T ss_pred ccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcc---ccccHHHHHhcCCC
Confidence 6999998773 358999997431 12233333222212
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCCC------CcCC----CCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHH
Q 048654 589 DQEGLSKQEAVRAKLGKFGLPSHN------HLTP----IAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDAL 658 (723)
Q Consensus 589 ~~~~~~~~~~~~~~L~~~gl~~~~------~~~~----i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l 658 (723)
.. ..+++.++++..++.+.. .++. ...||||||||++|||||+++|+||||||||++||.++...|
T Consensus 1322 ~a----t~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I 1397 (1466)
T PTZ00265 1322 DA----TREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLI 1397 (1466)
T ss_pred CC----CHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHH
Confidence 21 334566666655542210 0122 357999999999999999999999999999999999999999
Q ss_pred HHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEEC----CeEEecCCCHHHHHH
Q 048654 659 ADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVEN----GTVSRFPGTFEEYKE 711 (723)
Q Consensus 659 ~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~----G~i~~~~g~~~~~~~ 711 (723)
.+.|.+. +.|+|+|||++..+. .| |+|+||++ |+++...|+.+++.+
T Consensus 1398 ~~~L~~~~~~~~~TvIiIaHRlsti~-~a-----D~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1398 EKTIVDIKDKADKTIITIAHRIASIK-RS-----DKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred HHHHHHHhccCCCEEEEEechHHHHH-hC-----CEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 9999887 369999999999886 46 59999999 896544699998864
No 32
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.5e-56 Score=558.49 Aligned_cols=204 Identities=24% Similarity=0.281 Sum_probs=163.3
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
.-|+++||+|+|++...++|+||||+|++||++||||++|||||||+++|.|+++|++|+|.+++. .++
T Consensus 1283 g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i 1362 (1522)
T TIGR00957 1283 GRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKI 1362 (1522)
T ss_pred CcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcC
Confidence 469999999999765446999999999999999999999999999999999999999999998873 368
Q ss_pred EEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCC------CcCCC----CCCCHHHHHHHHHHH
Q 048654 563 GRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHN------HLTPI----AKLSGGQKARVVFTS 632 (723)
Q Consensus 563 g~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~------~~~~i----~~LSGGqkqRv~lAr 632 (723)
++++|+..- ...++...+ ..+.. ...+++.++|+..++.+.. .+..+ ..||||||||++|||
T Consensus 1363 ~iVpQdp~L---F~gTIr~NL-dp~~~----~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LAR 1434 (1522)
T TIGR00957 1363 TIIPQDPVL---FSGSLRMNL-DPFSQ----YSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLAR 1434 (1522)
T ss_pred eEECCCCcc---cCccHHHHc-CcccC----CCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHH
Confidence 999997531 122322222 21111 1345566777776653210 11223 469999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||+++|+||||||||++||.++...|.+.|++. +.|||+|+|+++.+.. | |+|+||++|+|+++ |+++++.
T Consensus 1435 ALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~-~-----DrIlVld~G~IvE~-G~~~eLl 1507 (1522)
T TIGR00957 1435 ALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMD-Y-----TRVIVLDKGEVAEF-GAPSNLL 1507 (1522)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-C-----CEEEEEECCEEEEE-CCHHHHH
Confidence 999999999999999999999999999999875 3699999999999875 4 59999999999875 8998876
Q ss_pred HH
Q 048654 711 ED 712 (723)
Q Consensus 711 ~~ 712 (723)
+.
T Consensus 1508 ~~ 1509 (1522)
T TIGR00957 1508 QQ 1509 (1522)
T ss_pred hC
Confidence 53
No 33
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.7e-54 Score=541.12 Aligned_cols=202 Identities=22% Similarity=0.277 Sum_probs=163.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
-|+++||+|+|++...++|+||||+|++||+|||||++|||||||+++|.|+++|++|+|.+++. ..++
T Consensus 1308 ~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~ 1387 (1560)
T PTZ00243 1308 SLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFS 1387 (1560)
T ss_pred eEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcce
Confidence 59999999999765446899999999999999999999999999999999999999999998873 3589
Q ss_pred EEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCC------CcCCC----CCCCHHHHHHHHHHHH
Q 048654 564 RYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHN------HLTPI----AKLSGGQKARVVFTSI 633 (723)
Q Consensus 564 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~------~~~~i----~~LSGGqkqRv~lAra 633 (723)
+++|+..- +..++...+ ..+.. ...+++.++|+..++.+.. .+..+ ..||||||||++||||
T Consensus 1388 iVpQdp~L---F~gTIreNI-dp~~~----~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARA 1459 (1560)
T PTZ00243 1388 MIPQDPVL---FDGTVRQNV-DPFLE----ASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARA 1459 (1560)
T ss_pred EECCCCcc---ccccHHHHh-CcccC----CCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHH
Confidence 99997531 122332222 22211 1346677888887764321 11222 4799999999999999
Q ss_pred HccC-CCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 634 SMSK-PHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 634 l~~~-p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+++ |+||||||||++||.++...|.+.|++. +.|||+|+|+++.+.. | |+|+||++|+|+++ |+++++.
T Consensus 1460 LL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~-----DrIlVLd~G~VvE~-Gt~~eLl 1532 (1560)
T PTZ00243 1460 LLKKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQ-Y-----DKIIVMDHGAVAEM-GSPRELV 1532 (1560)
T ss_pred HhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHh-C-----CEEEEEECCEEEEE-CCHHHHH
Confidence 9995 8999999999999999999999999875 3699999999999864 5 59999999999875 8998876
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
+
T Consensus 1533 ~ 1533 (1560)
T PTZ00243 1533 M 1533 (1560)
T ss_pred h
Confidence 4
No 34
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=8.9e-53 Score=529.17 Aligned_cols=202 Identities=26% Similarity=0.366 Sum_probs=162.3
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
.-|+++||+++|++...++|+||||+|++||+|||+|++|||||||+++|+|+++ .+|+|.+++. .++
T Consensus 1216 g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~i 1294 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAF 1294 (1490)
T ss_pred CeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhce
Confidence 4699999999997644579999999999999999999999999999999999997 7999998773 368
Q ss_pred EEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCC------cCCC----CCCCHHHHHHHHHHH
Q 048654 563 GRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNH------LTPI----AKLSGGQKARVVFTS 632 (723)
Q Consensus 563 g~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~------~~~i----~~LSGGqkqRv~lAr 632 (723)
++++|++.- +..++...+ ..+. ....+++..+|+.+++..... +..+ ..||||||||++|||
T Consensus 1295 s~IpQdp~L---F~GTIR~NL-dp~~----~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LAR 1366 (1490)
T TIGR01271 1295 GVIPQKVFI---FSGTFRKNL-DPYE----QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLAR 1366 (1490)
T ss_pred EEEeCCCcc---CccCHHHHh-Cccc----CCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHH
Confidence 999997531 122322222 2111 113566778888877642111 1222 369999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||+++|+||||||||++||..+...|.+.|++. +.|||+|||+++.+.. | |+|++|++|+|+++ |++.++.
T Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-~-----DrIlvL~~G~ivE~-g~p~~Ll 1439 (1490)
T TIGR01271 1367 SILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE-C-----QQFLVIEGSSVKQY-DSIQKLL 1439 (1490)
T ss_pred HHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-C-----CEEEEEECCEEEEe-CCHHHHH
Confidence 999999999999999999999999999999886 3699999999998875 6 59999999999976 7888775
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
+
T Consensus 1440 ~ 1440 (1490)
T TIGR01271 1440 N 1440 (1490)
T ss_pred c
Confidence 3
No 35
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=8.1e-53 Score=525.66 Aligned_cols=204 Identities=23% Similarity=0.324 Sum_probs=161.0
Q ss_pred eEEEEEEEEEcCC--CcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC---CCcceEEECCc-------eeE
Q 048654 495 LLQLIEVSFSYPN--REDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS---PTEGEVRRSQK-------LRI 562 (723)
Q Consensus 495 ~l~~~~ls~~y~~--~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~---p~~G~I~~~~~-------~~i 562 (723)
+|+++||++.|+. ....+|+|||++|++|++++|+|||||||||||++|+|+.+ |++|+|.+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~~~~~~i 838 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRSI 838 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECChhhhcce
Confidence 5899999999952 23468999999999999999999999999999999999997 78899998874 247
Q ss_pred EEEcccc--ccccCccccHHHHHHhhC-CCCCC-CcHHHHHHHHHHhCCCCCCCCcCCCC----CCCHHHHHHHHHHHHH
Q 048654 563 GRYSQHF--VDLLTMEETPVSYLLRLH-PDQEG-LSKQEAVRAKLGKFGLPSHNHLTPIA----KLSGGQKARVVFTSIS 634 (723)
Q Consensus 563 g~~~q~~--~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~L~~~gl~~~~~~~~i~----~LSGGqkqRv~lAral 634 (723)
+|++|+. ...+++.++... ..... +.... ....+.+.++++.++|.+.. ++.++ .|||||||||+||++|
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~-~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-d~~v~~~~~~LSgGqrqRl~Ia~aL 916 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRF-SAYLRQPKSVSKSEKMEYVEEVIKLLEMESYA-DAVVGVPGEGLNVEQRKRLTIGVEL 916 (1394)
T ss_pred eeecccccCCCCCCHHHHHHH-HHHhCCCCCCCHHHHHHHHHHHHHHcCChhhC-CCeeCCCCCCCCHHHhhHHHHHHHH
Confidence 9999963 334455554321 11111 11100 01234578899999997544 35555 7999999999999999
Q ss_pred ccCCC-eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHH-HHHhcCcCCCcEEEEEECC-eEEecCCCH
Q 048654 635 MSKPH-ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRL-ISRVCDDEERSEIWVVENG-TVSRFPGTF 706 (723)
Q Consensus 635 ~~~p~-lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~-~~~~~d~~~~drv~vl~~G-~i~~~~g~~ 706 (723)
+.+|+ ||||||||+|||..+...+.+.|+++ +.|||+++|+++. +...| |+|++|.+| +++ +.|++
T Consensus 917 ~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~-----D~vl~L~~GG~iv-~~G~~ 988 (1394)
T TIGR00956 917 VAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEF-----DRLLLLQKGGQTV-YFGDL 988 (1394)
T ss_pred HcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhc-----CEEEEEcCCCEEE-EECCc
Confidence 99997 99999999999999999999999887 3599999999986 45677 499999997 987 45665
No 36
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.9e-51 Score=509.03 Aligned_cols=205 Identities=23% Similarity=0.308 Sum_probs=158.5
Q ss_pred eEEEEEEEEEcCC-----------CcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC--CcceEEECCc--
Q 048654 495 LLQLIEVSFSYPN-----------REDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP--TEGEVRRSQK-- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~-----------~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p--~~G~I~~~~~-- 559 (723)
.+.++||++.++. ....+|+|||+.|++|++++|+|||||||||||++|+|..++ .+|+|.+++.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 5889999988742 123589999999999999999999999999999999999773 6899998763
Q ss_pred ------eeEEEEcccc--ccccCccccHHHHHHhhCCCCCC-CcHHHHHHHHHHhCCCCCCCCcCCC-----CCCCHHHH
Q 048654 560 ------LRIGRYSQHF--VDLLTMEETPVSYLLRLHPDQEG-LSKQEAVRAKLGKFGLPSHNHLTPI-----AKLSGGQK 625 (723)
Q Consensus 560 ------~~ig~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~gl~~~~~~~~i-----~~LSGGqk 625 (723)
..+||++|.. ...+++.++.........+.... ....+.+.++++.+||.+..+ +.+ ..||||||
T Consensus 947 ~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~-~~vg~~~~~~LSgGer 1025 (1470)
T PLN03140 947 KQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKD-AIVGLPGVTGLSTEQR 1025 (1470)
T ss_pred ChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhC-CccCCCCCCCcCHHHH
Confidence 2479999963 33445555532211111111100 012235788999999975443 443 58999999
Q ss_pred HHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHH-HHHHhcCcCCCcEEEEEEC-CeEE
Q 048654 626 ARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSR-LISRVCDDEERSEIWVVEN-GTVS 700 (723)
Q Consensus 626 qRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~-~~~~~~d~~~~drv~vl~~-G~i~ 700 (723)
|||+||++|+.+|+||||||||+|||..+...+++.|+++ +.|||+++|+++ .+..+|| ++++|.+ |+++
T Consensus 1026 kRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D-----~vllL~~gG~~v 1100 (1470)
T PLN03140 1026 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD-----ELLLMKRGGQVI 1100 (1470)
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCC-----EEEEEcCCCEEE
Confidence 9999999999999999999999999999999999999887 369999999998 4677884 9999996 8986
Q ss_pred ecCCCH
Q 048654 701 RFPGTF 706 (723)
Q Consensus 701 ~~~g~~ 706 (723)
+.|+.
T Consensus 1101 -~~G~~ 1105 (1470)
T PLN03140 1101 -YSGPL 1105 (1470)
T ss_pred -EECCc
Confidence 45664
No 37
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.2e-50 Score=481.66 Aligned_cols=205 Identities=23% Similarity=0.299 Sum_probs=163.1
Q ss_pred CCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECC-----------c
Q 048654 491 LTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQ-----------K 559 (723)
Q Consensus 491 ~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~-----------~ 559 (723)
+...-|+++|++++|......+|+||||+|++||+|||||..|||||||+.+|.++..|.+|+|.+++ +
T Consensus 1134 P~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLR 1213 (1381)
T KOG0054|consen 1134 PSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLR 1213 (1381)
T ss_pred CCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHH
Confidence 34457999999999987666899999999999999999999999999999999999999999999887 3
Q ss_pred eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCC------cC----CCCCCCHHHHHHH
Q 048654 560 LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNH------LT----PIAKLSGGQKARV 628 (723)
Q Consensus 560 ~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~------~~----~i~~LSGGqkqRv 628 (723)
.+++.+||++.-. -++..| -+......++++.++|+..+|..... +. --..+|-||||.|
T Consensus 1214 srlsIIPQdPvLFsGTvR~N---------LDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLl 1284 (1381)
T KOG0054|consen 1214 SRLSIIPQDPVLFSGTVRFN---------LDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLL 1284 (1381)
T ss_pred hcCeeeCCCCceecCccccc---------cCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHH
Confidence 4688999985311 122222 11111123455666666555432111 11 2357999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHH-cC-ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDE-FT-GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~-~~-~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
+|||||+++++||+|||+|+++|+++-..|.+.|++ |+ .|||.|.|.++.+.++ |||+||++|+|++| |+|
T Consensus 1285 CLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~------DrVlVld~G~v~Ef-dsP 1357 (1381)
T KOG0054|consen 1285 CLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDS------DRVLVLDAGRVVEF-DSP 1357 (1381)
T ss_pred HHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhc------CeEEEeeCCeEeec-CCh
Confidence 999999999999999999999999999999999987 44 7999999999999853 69999999999988 677
Q ss_pred HHHHH
Q 048654 707 EEYKE 711 (723)
Q Consensus 707 ~~~~~ 711 (723)
.++.+
T Consensus 1358 ~~Ll~ 1362 (1381)
T KOG0054|consen 1358 AELLS 1362 (1381)
T ss_pred HHHHh
Confidence 77653
No 38
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=6.8e-49 Score=416.76 Aligned_cols=423 Identities=26% Similarity=0.364 Sum_probs=275.9
Q ss_pred EeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCC
Q 048654 188 ISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEELVKLREEVASLQNSTSVDG 267 (723)
Q Consensus 188 i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 267 (723)
..+|+++||+|+||-||||-+++|+|...|.-|.. +. ..++ ..++..+- ..+++..+..+..- +..
T Consensus 97 pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~-----~~-pp~w-deVi~~Fr--GtELq~YF~~l~~g-~~r---- 162 (591)
T COG1245 97 PRPGKVVGILGPNGIGKSTALKILAGELKPNLGRY-----ED-PPSW-DEVIKRFR--GTELQNYFKKLYEG-ELR---- 162 (591)
T ss_pred CCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCC-----CC-CCCH-HHHHHHhh--hhHHHHHHHHHHcC-Ccc----
Confidence 46799999999999999999999999876643321 00 1111 11122111 12222222222100 000
Q ss_pred CCCCCchhhHHHHHHHHHH-HHH-hcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 048654 268 EEDGDDANDAGEKLAELYE-KLQ-ILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLD 345 (723)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~-~l~-~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLD 345 (723)
...-....+.+..++. ... .+..........++++.|+|. ...+|.+.+|||||-||++||.|++++.+++++|
T Consensus 163 ---~v~K~QYVd~iPk~~KG~v~elLk~~de~g~~devve~l~L~-nvl~r~v~~LSGGELQr~aIaa~l~rdADvY~FD 238 (591)
T COG1245 163 ---AVHKPQYVDLIPKVVKGKVGELLKKVDERGKFDEVVERLGLE-NVLDRDVSELSGGELQRVAIAAALLRDADVYFFD 238 (591)
T ss_pred ---eecchHHHHHHHHHhcchHHHHHHhhhhcCcHHHHHHHhcch-hhhhhhhhhcCchHHHHHHHHHHHhccCCEEEEc
Confidence 0000000111110000 000 000111123678899999997 4568999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChhhHHhhHHHHHHHHHHHHHH
Q 048654 346 EPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFDDFESGYEQRRKEMNKKFEI 422 (723)
Q Consensus 346 EPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 422 (723)
|||+.||...+...-+.++++ +++||+|.||+..+.-++|-|.++-.- .|-|.-+...+. .+..++....-
T Consensus 239 EpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~YG~-----pg~YGvvs~p~s-vr~gIN~yL~G 312 (591)
T COG1245 239 EPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILYGE-----PGVYGVVSKPKS-VRVGINEYLKG 312 (591)
T ss_pred CCcccccHHHHHHHHHHHHHHhccCCeEEEEechHHHHHHhhheeEEEecC-----CccceEeccchH-HHHHHHHHHhc
Confidence 999999999888777777765 579999999999999999999888632 122222211111 01111111000
Q ss_pred HHHHHHHHHHcCchhhhHHHHHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccccceeeecCCCCC-CC-CCeEEEEE
Q 048654 423 YEKQVKAAKRSGNRVQQEKVKDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDYSVEFHFPEPTE-LT-PPLLQLIE 500 (723)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~~~~ 500 (723)
| .+....+.+.+.+.|...++.. .. ..+++..+
T Consensus 313 y---------------------------------------------l~~EN~R~R~~~I~F~~~~~~~~~~~~~lv~y~~ 347 (591)
T COG1245 313 Y---------------------------------------------LPEENVRFRPEEIEFEEKPPRDDKARDTLVEYPD 347 (591)
T ss_pred c---------------------------------------------CchhcccccccceeeeccCcccccccceeeecch
Confidence 0 0011122233444554433321 12 45677777
Q ss_pred EEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccccCccccHH
Q 048654 501 VSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPV 580 (723)
Q Consensus 501 ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~~~~~~~~~ 580 (723)
+++.|++ +.|.-=.=+|..||+++++||||-||||++++|+|.++|++|. ....+++|-||.....+. .++.
T Consensus 348 ~~k~~g~---F~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~---~~~~~vSyKPQyI~~~~~--gtV~ 419 (591)
T COG1245 348 LKKTYGD---FKLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS---EEDLKVSYKPQYISPDYD--GTVE 419 (591)
T ss_pred heeecCc---eEEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC---CccceEeecceeecCCCC--CcHH
Confidence 8888863 2333333456788999999999999999999999999999998 556789999997644322 2322
Q ss_pred HHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHH
Q 048654 581 SYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALAD 660 (723)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~ 660 (723)
.++....+...+ ....-.+++.-|+|...+ .+++..|||||.|||+||.+|.++++|.|||||+++||.+.+-.+.+
T Consensus 420 ~~l~~~~~~~~~--~s~~~~ei~~pl~l~~i~-e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vak 496 (591)
T COG1245 420 DLLRSAIRSAFG--SSYFKTEIVKPLNLEDLL-ERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAK 496 (591)
T ss_pred HHHHHhhhhhcc--cchhHHhhcCccchHHHH-hcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHH
Confidence 222221111111 112234567778887544 58899999999999999999999999999999999999999998888
Q ss_pred HHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEE
Q 048654 661 ALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVE 695 (723)
Q Consensus 661 ~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~ 695 (723)
.|+++ ..|.++|-||+.++.-++| |++|++
T Consensus 497 vIRR~~e~~~kta~vVdHDi~~~dyvsD-----r~ivF~ 530 (591)
T COG1245 497 VIRRFIENNEKTALVVDHDIYMIDYVSD-----RLIVFE 530 (591)
T ss_pred HHHHHHhhcCceEEEEecceehhhhhhc-----eEEEEe
Confidence 88876 3689999999999998884 999886
No 39
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-48 Score=376.92 Aligned_cols=221 Identities=27% Similarity=0.382 Sum_probs=180.9
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||+++||+..||+||||+|.+||+++||||||||||||||||+|+..+ .+|.|.+.++.+....
T Consensus 2 mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~--~~G~I~i~g~~~~~~~--------- 70 (240)
T COG1126 2 MIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEP--DSGSITVDGEDVGDKK--------- 70 (240)
T ss_pred eEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCC--CCceEEECCEeccchh---------
Confidence 58999999999999999999999999999999999999999999999988765 4556666555443211
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
+...+++.++++.+.... ++...+.+++....-.......+++++++.++|+++||.+ ..+.+|.+||||
T Consensus 71 ---~~~~~R~~vGmVFQ~fnL------FPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~-ka~~yP~qLSGG 140 (240)
T COG1126 71 ---DILKLRRKVGMVFQQFNL------FPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLAD-KADAYPAQLSGG 140 (240)
T ss_pred ---hHHHHHHhcCeecccccc------cccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchh-hhhhCccccCcH
Confidence 334566777765432211 2234555555554444555667888999999999999985 468999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||||||||+++|+++|+|||||+|||+.+..+.+.++++ |.|.|+|||++.|+.++||||++|++|+++.. |+
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~-g~ 219 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEE-GP 219 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEe-cC
Confidence 999999999999999999999999999999999888887755 78999999999999999999999999998754 67
Q ss_pred hhhHHh
Q 048654 402 FDDFES 407 (723)
Q Consensus 402 ~~~~~~ 407 (723)
++++..
T Consensus 220 p~~~f~ 225 (240)
T COG1126 220 PEEFFD 225 (240)
T ss_pred HHHHhc
Confidence 776654
No 40
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-47 Score=374.95 Aligned_cols=208 Identities=26% Similarity=0.451 Sum_probs=175.0
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------ee
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ 561 (723)
++|+++||+++|++. .+|++|||+|.+||+++|+||+|||||||||||.||.+|++|+|.+++. .+
T Consensus 1 ~mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 1 MMIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred CeEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 479999999999864 5899999999999999999999999999999999999999999999873 25
Q ss_pred EEEEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
+|++||+| ++++++-+|........... ......+.+.++|+++||.+..+.. +.+|||||||||||||||+.+|+
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~-~k~eA~~~A~~lL~~VGL~~ka~~y-P~qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKL-SKAEAREKALELLEKVGLADKADAY-PAQLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCC-CHHHHHHHHHHHHHHcCchhhhhhC-ccccCcHHHHHHHHHHHHcCCCC
Confidence 89999976 45666666654332221111 0112345678899999998776654 48999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
++|+|||||+|||+....+.+.++++. .|+|+|||++.|+.++|| ||++|++|+|++ .|+++++..
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~Vad-----rviFmd~G~iie-~g~p~~~f~ 225 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVAD-----RVIFMDQGKIIE-EGPPEEFFD 225 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhh-----eEEEeeCCEEEE-ecCHHHHhc
Confidence 999999999999999999999988874 599999999999999995 999999999975 578887753
No 41
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.8e-45 Score=374.22 Aligned_cols=212 Identities=34% Similarity=0.479 Sum_probs=177.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
+|+++|++++|++ .++|+|+||+|.+|++++|+||||||||||||+|+|+++|.+|+|+++++ ..++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 6899999999985 46899999999999999999999999999999999999999999999884 2689
Q ss_pred EEccccc--cccCccccHHHHHHhhCCCCC-----CCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 564 RYSQHFV--DLLTMEETPVSYLLRLHPDQE-----GLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 564 ~~~q~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
|++|... ..+++.+.+. +..+|... +..+.+.+..+|+.+|+.+.. .+++.+|||||||||.|||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~---~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-~r~~~~LSGGerQrv~iArALaQ 155 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVL---LGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-DRPVDELSGGERQRVLIARALAQ 155 (258)
T ss_pred EeccCCCCCCCcEEeehHh---hcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-cCcccccChhHHHHHHHHHHHhc
Confidence 9999753 2344444321 22222211 112345688899999998654 57899999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH-HHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE-EYKE 711 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~-~~~~ 711 (723)
+|+||||||||++||+.++..++++|+++. .|||+|+||++++.++|| ++++|++|+|+. .|+++ .+.+
T Consensus 156 ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad-----~~i~lk~G~i~a-~G~p~evlT~ 229 (258)
T COG1120 156 ETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYAD-----HLILLKDGKIVA-QGTPEEVLTE 229 (258)
T ss_pred CCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEEECCeEEe-ecCcchhcCH
Confidence 999999999999999999999999998875 589999999999999995 999999999985 57765 4566
Q ss_pred HHHHHHH
Q 048654 712 DLQREIK 718 (723)
Q Consensus 712 ~~~~~~~ 718 (723)
+.+++++
T Consensus 230 e~l~~Vy 236 (258)
T COG1120 230 ENLREVY 236 (258)
T ss_pred HHHHHHh
Confidence 7777664
No 42
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-44 Score=368.43 Aligned_cols=209 Identities=32% Similarity=0.460 Sum_probs=171.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------eeEEE
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------LRIGR 564 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------~~ig~ 564 (723)
.++|+++|+++.|++. ++|+||||+|.+|++++|+||||||||||+|+|+|+++|++|+|.+.++ .+|||
T Consensus 2 ~~~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 2 MPMIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred CcEEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 3579999999999864 4999999999999999999999999999999999999999999997664 47999
Q ss_pred EccccccccCccccHHHHHHh-hCCCC-----CCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 565 YSQHFVDLLTMEETPVSYLLR-LHPDQ-----EGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
+||...-...++-++...+.. .+... ....+.+.+.++|+++|+.+. .++++++|||||+|||.|||||+++|
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~-~~r~i~~LSGGQ~QRV~lARAL~~~p 158 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDL-RDRQIGELSGGQKQRVLLARALAQNP 158 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhh-hCCcccccCcHHHHHHHHHHHhccCC
Confidence 999652223333343333221 11111 111235779999999999855 45899999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
+||||||||+|+|+.+...|.++|+++. .||||||||+..+..+|| +|+.|+ +++. +.|+++++..
T Consensus 159 ~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D-----~vi~Ln-~~~~-~~G~~~~~~~ 227 (254)
T COG1121 159 DLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFD-----RVICLN-RHLI-ASGPPEEVLT 227 (254)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCC-----EEEEEc-CeeE-eccChhhccC
Confidence 9999999999999999999999998874 599999999999999995 899995 5564 4588877544
No 43
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-44 Score=357.56 Aligned_cols=218 Identities=27% Similarity=0.358 Sum_probs=179.3
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||||.|+++.+++|+||+|++|++++|||||||||||+||+|+++..| ++|+|.+.+.++...+.
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~~~d~-------- 70 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDISDLDP-------- 70 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecccCCH--------
Confidence 58999999999999999999999999999999999999999999999988654 56677777777654332
Q ss_pred hhHHHHHHHHHHHhhh-cCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc-cccCCCCCCCC
Q 048654 245 AHEELVKLREEVASLQ-NSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK-EMQGRPTKSFS 322 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~-~~~~~~~~~LS 322 (723)
..++..++|+- +..+ ++...+.+++..+. .+..+.....++++.++|+.+||++ .+.+|++++||
T Consensus 71 -----~~LRr~IGYviQqigL-------FPh~Tv~eNIa~VP-~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLS 137 (309)
T COG1125 71 -----VELRRKIGYVIQQIGL-------FPHLTVAENIATVP-KLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELS 137 (309)
T ss_pred -----HHHHHhhhhhhhhccc-------CCCccHHHHHHhhh-hhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcC
Confidence 24555666552 2211 12334445444432 3445566778899999999999975 57899999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR----WKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~----~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||.+||||+.+|+||||||||++|||.++..|++.+.+ +++|||+||||++++..++|||++|++|+++.|
T Consensus 138 GGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~ 217 (309)
T COG1125 138 GGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQY 217 (309)
T ss_pred cchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEe
Confidence 9999999999999999999999999999999999999887754 478999999999999999999999999999887
Q ss_pred cCChhhHH
Q 048654 399 RGNFDDFE 406 (723)
Q Consensus 399 ~g~~~~~~ 406 (723)
++++++.
T Consensus 218 -~~P~~il 224 (309)
T COG1125 218 -DTPDEIL 224 (309)
T ss_pred -CCHHHHH
Confidence 5655553
No 44
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-43 Score=363.82 Aligned_cols=220 Identities=25% Similarity=0.385 Sum_probs=179.8
Q ss_pred ceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 165 DITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
+|++++|+|.|.. .++|+||||+|++|+++||||.||||||||+|||+++.. |.+|.|.+.++++...+..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~-- 76 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEA-- 76 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChH--
Confidence 5899999999976 479999999999999999999999999999999998765 4566777777776554332
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
.+..+++.++++.+.... .....+.++++..++. ......+.++|+.++|+.+||+ +..++++.
T Consensus 77 --------~Lr~~R~~IGMIFQhFnL------LssrTV~~NvA~PLei-ag~~k~ei~~RV~elLelVgL~-dk~~~yP~ 140 (339)
T COG1135 77 --------ELRQLRQKIGMIFQHFNL------LSSRTVFENVAFPLEL-AGVPKAEIKQRVAELLELVGLS-DKADRYPA 140 (339)
T ss_pred --------HHHHHHhhccEEeccccc------cccchHHhhhhhhHhh-cCCCHHHHHHHHHHHHHHcCCh-hhhccCch
Confidence 345567788776443211 1122344555544432 3355678899999999999998 56789999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR----WKKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~----~~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+|||||||||+|||||+.+|+|||+|||||+|||.+...+.++|++ ++.||++|||.|+.+..+|||+.+|++|++
T Consensus 141 qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~l 220 (339)
T COG1135 141 QLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRL 220 (339)
T ss_pred hcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEE
Confidence 9999999999999999999999999999999999999999998875 478999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+.. |+..+.
T Consensus 221 vE~-G~v~~v 229 (339)
T COG1135 221 VEE-GTVSEV 229 (339)
T ss_pred EEe-ccHHHh
Confidence 864 665544
No 45
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.5e-43 Score=363.25 Aligned_cols=222 Identities=32% Similarity=0.388 Sum_probs=171.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++||+++|+++++|+|+||+|++|++++|+||||||||||||+|+|+..| ..|.|.+.+..+......
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i~~~~~k------- 72 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDIASLSPK------- 72 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCchhhcCHH-------
Confidence 58999999999999999999999999999999999999999999999997654 566777777665443322
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
.+.+.++++++...........+....++ ..+..+......++.+.+.++|+.+|+. ++.+|++.+||||
T Consensus 73 ------elAk~ia~vpQ~~~~~~~~tV~d~V~~GR---~p~~~~~~~~~~~D~~~v~~aL~~~~~~-~la~r~~~~LSGG 142 (258)
T COG1120 73 ------ELAKKLAYVPQSPSAPFGLTVYELVLLGR---YPHLGLFGRPSKEDEEIVEEALELLGLE-HLADRPVDELSGG 142 (258)
T ss_pred ------HHhhhEEEeccCCCCCCCcEEeehHhhcC---CcccccccCCCHhHHHHHHHHHHHhCcH-HHhcCcccccChh
Confidence 23445566655432211111111111111 0111111112445566899999999997 4668999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||.|||||+++|+||||||||++||..++..++++++++ +.|||+|.||++++..+||++++|++|+++. .|
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a-~G 221 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVA-QG 221 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEe-ec
Confidence 999999999999999999999999999999999999999865 4799999999999999999999999999975 57
Q ss_pred ChhhHH
Q 048654 401 NFDDFE 406 (723)
Q Consensus 401 ~~~~~~ 406 (723)
.+.+..
T Consensus 222 ~p~evl 227 (258)
T COG1120 222 TPEEVL 227 (258)
T ss_pred Ccchhc
Confidence 766543
No 46
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-43 Score=352.59 Aligned_cols=210 Identities=33% Similarity=0.441 Sum_probs=177.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
.++|++++|+++|+++ .+|+||||+|++||+++|+||+|||||||||+|.|+++|++|+|++.+.
T Consensus 6 ~~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 5789999999999874 5899999999999999999999999999999999999999999998763
Q ss_pred -eeEEEEccc--cccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 560 -LRIGRYSQH--FVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 560 -~~ig~~~q~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
.++|++||+ +++.+++.+|+.. .++.+........++.+...|+.+||.....+..+++|||||++||+||||++.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVaf-plre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAial 162 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAF-PLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIAL 162 (263)
T ss_pred HhheeEEeeccccccccchhHhhhe-ehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhc
Confidence 358999996 4667788777433 233332221111234466678999999874445669999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
+|+||++||||+||||.+...+-++|++++ .|+||||||++.+..+|| ||+++.+|+|. +.|+++++.+
T Consensus 163 dPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~D-----rv~~L~~gkv~-~~Gt~~el~~ 235 (263)
T COG1127 163 DPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIAD-----RVAVLADGKVI-AEGTPEELLA 235 (263)
T ss_pred CCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhc-----eEEEEeCCEEE-EeCCHHHHHh
Confidence 999999999999999999999888887764 699999999999999995 99999999997 6799998765
No 47
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.9e-42 Score=410.75 Aligned_cols=336 Identities=26% Similarity=0.326 Sum_probs=229.8
Q ss_pred HHHHHHHHHhCCCCccccCCCCCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEE
Q 048654 297 EAQASKILAGLGFTKEMQGRPTKSFSGGWRMRISLARALFVQP--TLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLV 371 (723)
Q Consensus 297 ~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P--~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVI 371 (723)
..++. +|+.+||.....++++.+|||||+|||+||+||+.+| +||||||||++||+..+.+|.++|+++ +.|||
T Consensus 467 ~~rl~-~L~~vGL~~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~TVI 545 (943)
T PRK00349 467 RERLK-FLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTLI 545 (943)
T ss_pred HHHHH-HhhccccCCCCCCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 34453 7888899643258999999999999999999999997 999999999999999999999998765 67999
Q ss_pred EEeCCHHHHHhhCCEEEEE------eCCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHH
Q 048654 372 VVSHDRDFLNTVCTEIIHL------HDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDR 445 (723)
Q Consensus 372 ivsHdl~~l~~iad~Ii~L------~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (723)
+|+||++++. .||+|++| ++|+++ +.|+++++..... .+...+ +.
T Consensus 546 vVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv-~~g~~~e~~~~~~----~l~~~~---------------------l~-- 596 (943)
T PRK00349 546 VVEHDEDTIR-AADYIVDIGPGAGVHGGEVV-ASGTPEEIMKNPN----SLTGQY---------------------LS-- 596 (943)
T ss_pred EEeCCHHHHH-hCCEEEEeccccCCCCCEEe-eccCHHHHhcChh----heeehh---------------------hc--
Confidence 9999999987 59999999 899985 5687766532100 000000 00
Q ss_pred HHHHHHHHHhhhhccCcccCCCCCCCCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcE
Q 048654 446 AKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTR 525 (723)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~ 525 (723)
.. . ....+.. + .....+.|+++|++. ..|+|+||+|..|++
T Consensus 597 -------------~~-~------~~~~~~~----------~--~~~~~~~L~v~~l~~-------~~L~~isl~Ip~Gei 637 (943)
T PRK00349 597 -------------GK-K------KIEVPKE----------R--RKGNGKFLKLKGARE-------NNLKNVDVEIPLGKF 637 (943)
T ss_pred -------------cc-c------ccccccc----------c--cCCCcceEEecCCcc-------CCcCceEEEEeCCCE
Confidence 00 0 0000000 0 001235788998862 148999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHH---------cCCCCCcce------------EEECCc-------e-----------------
Q 048654 526 VAIVGPNGAGKSTLLNLLA---------GDLSPTEGE------------VRRSQK-------L----------------- 560 (723)
Q Consensus 526 vaIvGpNGsGKSTLlk~L~---------Gl~~p~~G~------------I~~~~~-------~----------------- 560 (723)
++|+|+||||||||++.+. +...+..+. |.++.. .
T Consensus 638 vgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa 717 (943)
T PRK00349 638 TCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFA 717 (943)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhc
Confidence 9999999999999998763 111111100 111000 0
Q ss_pred ------eEEEEcccccccc----------------------C--cc--------------------ccH-------HHHH
Q 048654 561 ------RIGRYSQHFVDLL----------------------T--ME--------------------ETP-------VSYL 583 (723)
Q Consensus 561 ------~ig~~~q~~~~~~----------------------~--~~--------------------~~~-------~~~~ 583 (723)
..||.++.|..+. . .. .+. +...
T Consensus 718 ~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~ 797 (943)
T PRK00349 718 GTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEA 797 (943)
T ss_pred cCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCccccCccccccceEEEECCCCHHHHhcCcHHHH
Confidence 0111111110000 0 00 000 0000
Q ss_pred HhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC---CeEEeccCCCCCCHHHHHHHHH
Q 048654 584 LRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP---HILLLDEPTNHLDMQSIDALAD 660 (723)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p---~lLlLDEPT~~LD~~s~~~l~~ 660 (723)
+.++... .......+.|..+||......+++.+|||||+|||.||++|+.+| +|+||||||+|||+..+..|.+
T Consensus 798 l~~f~~~---~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~ 874 (943)
T PRK00349 798 LEFFEAI---PKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLE 874 (943)
T ss_pred HHHHHhc---hhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHH
Confidence 1111000 011223467888999754345678999999999999999999999 9999999999999999999999
Q ss_pred HHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEE------ECCeEEecCCCHHHHHH
Q 048654 661 ALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVV------ENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 661 ~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl------~~G~i~~~~g~~~~~~~ 711 (723)
+|+++ +.|||+||||++++. .| |+|++| .+|+|+ +.|+++++..
T Consensus 875 ~L~~l~~~G~TVIiitH~~~~i~-~a-----D~ii~Lgp~~G~~~G~Iv-~~Gt~~el~~ 927 (943)
T PRK00349 875 VLHRLVDKGNTVVVIEHNLDVIK-TA-----DWIIDLGPEGGDGGGEIV-ATGTPEEVAK 927 (943)
T ss_pred HHHHHHhCCCEEEEEecCHHHHH-hC-----CEEEEecCCcCCCCCEEE-EeCCHHHHHh
Confidence 99876 359999999999985 67 499999 689997 5688887653
No 48
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-43 Score=352.16 Aligned_cols=217 Identities=30% Similarity=0.438 Sum_probs=181.5
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECC--------------c
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQ--------------K 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~--------------~ 559 (723)
.+|+++||++.|+++ ..+|++|||+|++||+|+||||+|||||||||+|.|+..|++|+|.+++ +
T Consensus 2 ~~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 2 MMIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred ceEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 579999999999754 4689999999999999999999999999999999999999999999876 2
Q ss_pred eeEEEEccccc--cccCccccHHHHHHh-------hCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHH
Q 048654 560 LRIGRYSQHFV--DLLTMEETPVSYLLR-------LHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 ~~ig~~~q~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~l 630 (723)
.++|+++|++. ..+++.+|++...+. ++.. ....+...+-++|+++||.+... ++..+|||||||||+|
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfgl-fsk~dk~~Al~aLervgi~~~A~-qra~~LSGGQQQRVaI 158 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGL-FSKEDKAQALDALERVGILDKAY-QRASTLSGGQQQRVAI 158 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCC-CCHHHHHHHHHHHHHcCcHHHHH-HHhccCCcchhHHHHH
Confidence 36999999763 333333343222111 1111 11123455778999999986554 6779999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
||||+++|+|||.|||+++|||.+.+.+++.|++.+ .|||+..|+++++.++|+ ||+-|++|+|+ |+|++
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~-----Riigl~~G~iv-fDg~~ 232 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYAD-----RIIGLKAGRIV-FDGPA 232 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHh-----hheEecCCcEE-EeCCh
Confidence 999999999999999999999999999999998764 699999999999999995 99999999997 89999
Q ss_pred HHHHHHHHHHHHh
Q 048654 707 EEYKEDLQREIKA 719 (723)
Q Consensus 707 ~~~~~~~~~~~~~ 719 (723)
.++.++.+.+++.
T Consensus 233 ~el~~~~~~~iYg 245 (258)
T COG3638 233 SELTDEALDEIYG 245 (258)
T ss_pred hhhhHHHHHHHhc
Confidence 9999988888865
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=363.42 Aligned_cols=207 Identities=32% Similarity=0.443 Sum_probs=171.5
Q ss_pred eEEEEEEEEEcCCC---cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 495 LLQLIEVSFSYPNR---EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~---~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
||++++|++.|+.+ ...+|+||||+|++||++||||.+|||||||+|+|.++.+|++|+|.+++.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 68999999999862 235899999999999999999999999999999999999999999998872
Q ss_pred --eeEEEEcccccc--ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 560 --LRIGRYSQHFVD--LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 560 --~~ig~~~q~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
.+||++||+|.- ..++.+|+ .+.+..... ......+++.++|+.+||.+... +.+.+|||||||||+|||||+
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~Nv-A~PLeiag~-~k~ei~~RV~elLelVgL~dk~~-~yP~qLSGGQKQRVaIARALa 157 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENV-AFPLELAGV-PKAEIKQRVAELLELVGLSDKAD-RYPAQLSGGQKQRVAIARALA 157 (339)
T ss_pred HHhhccEEeccccccccchHHhhh-hhhHhhcCC-CHHHHHHHHHHHHHHcCChhhhc-cCchhcCcchhhHHHHHHHHh
Confidence 369999998742 23444442 222222211 11123567889999999997665 455899999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
.+|+|||+|||||+|||++...|+++|++.+ .||++|||.|+.+.++|| ||.||++|+|++ .|+..++.
T Consensus 158 ~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~-----rVavm~~G~lvE-~G~v~~vF 230 (339)
T COG1135 158 NNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICD-----RVAVLDQGRLVE-EGTVSEVF 230 (339)
T ss_pred cCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhh-----hheEeeCCEEEE-eccHHHhh
Confidence 9999999999999999999999999998764 699999999999999995 999999999986 47666543
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.5e-43 Score=347.38 Aligned_cols=226 Identities=24% Similarity=0.325 Sum_probs=183.6
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
...|++++|+++||++.||+||||+|++||+++|+||||||||||||+|.|+..| ..|+|.+.+.++.....
T Consensus 6 ~~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i~~ls~------ 77 (263)
T COG1127 6 EPLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDIPQLSE------ 77 (263)
T ss_pred cceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcchhccCH------
Confidence 4579999999999999999999999999999999999999999999999998765 45666777766554332
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
.+...++..++.+.+.... +....+.++++..+.....+.....++.+..-|+.+||.....+.++++||
T Consensus 78 ----~~~~~ir~r~GvlFQ~gAL------FssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELS 147 (263)
T COG1127 78 ----EELYEIRKRMGVLFQQGAL------FSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELS 147 (263)
T ss_pred ----HHHHHHHhheeEEeecccc------ccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhc
Confidence 2334566666665443221 112344555555444444556667778888899999998765789999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||++|++|||||+.+|+||++||||+||||.+...+.++|+++ +.|+|+||||++.+..+||||++|.+|+|. +
T Consensus 148 GGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~-~ 226 (263)
T COG1127 148 GGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVI-A 226 (263)
T ss_pred chHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEE-E
Confidence 99999999999999999999999999999999988887777654 679999999999999999999999999996 5
Q ss_pred cCChhhHHh
Q 048654 399 RGNFDDFES 407 (723)
Q Consensus 399 ~g~~~~~~~ 407 (723)
.|+++++..
T Consensus 227 ~Gt~~el~~ 235 (263)
T COG1127 227 EGTPEELLA 235 (263)
T ss_pred eCCHHHHHh
Confidence 699877643
No 51
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=7.7e-42 Score=421.60 Aligned_cols=330 Identities=24% Similarity=0.370 Sum_probs=225.0
Q ss_pred HHHhCCCCccccCCCCCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCH
Q 048654 303 ILAGLGFTKEMQGRPTKSFSGGWRMRISLARALFVQP--TLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDR 377 (723)
Q Consensus 303 ~L~~lgl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P--~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl 377 (723)
+|..+||.....++++.+|||||+|||+||+||+.+| +||||||||++||+..+.+|.++|+++ +.|||+||||+
T Consensus 459 ~L~~vGL~~L~ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILDEPTagLD~~~~~~L~~lL~~L~~~G~TVIvVeHd~ 538 (1809)
T PRK00635 459 ILIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQDTHKLINVIKKLRDQGNTVLLVEHDE 538 (1809)
T ss_pred HHHhccccCCCCCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEECCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcH
Confidence 4556788643257999999999999999999999999 899999999999999999999988865 67999999999
Q ss_pred HHHHhhCCEEEEEe------CCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHH
Q 048654 378 DFLNTVCTEIIHLH------DQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAAA 451 (723)
Q Consensus 378 ~~l~~iad~Ii~L~------~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (723)
++ ..+||+|++|. +|+++ +.|+++++...... +...+ . +
T Consensus 539 ~v-i~~aDrVi~L~pGag~~gG~Iv-~~G~~~eil~~~~~----l~~~~----------l--~----------------- 583 (1809)
T PRK00635 539 QM-ISLADRIIDIGPGAGIFGGEVL-FNGSPREFLAKSDS----LTAKY----------L--R----------------- 583 (1809)
T ss_pred HH-HHhCCEEEEEcCCcccCCCEEE-EecCHHHHhhChHH----HHHHH----------h--c-----------------
Confidence 95 57899999996 67875 56777665321000 00000 0 0
Q ss_pred HHHhhhhccCcccCCCCCCCCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcC
Q 048654 452 KEASKNKAKGKVDEDEPLPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGP 531 (723)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGp 531 (723)
. .. ... .+.. .....+.|++++++. ..|+++||+|+.|++++|+|+
T Consensus 584 -------~--~~----~~~-~~~~-------------~~~~~~~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~ 629 (1809)
T PRK00635 584 -------Q--EL----TIP-IPEK-------------RTNSLGTLTLSKATK-------HNLKDLTISLPLGRLTVVTGV 629 (1809)
T ss_pred -------C--cc----ccc-Cccc-------------ccCCCCeEEEecccc-------CCccceEEEEcCCcEEEEEcC
Confidence 0 00 000 0000 000124688888863 158999999999999999999
Q ss_pred CCCcHHHHHH---------HHHcCCCCCc----ce--------------------EEECC-----c---------eeEE-
Q 048654 532 NGAGKSTLLN---------LLAGDLSPTE----GE--------------------VRRSQ-----K---------LRIG- 563 (723)
Q Consensus 532 NGsGKSTLlk---------~L~Gl~~p~~----G~--------------------I~~~~-----~---------~~ig- 563 (723)
||||||||++ .|.|...+.. +. +++.+ + ...|
T Consensus 630 nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~ 709 (1809)
T PRK00635 630 SGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGL 709 (1809)
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEecCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCC
Confidence 9999999999 5666543211 11 21000 0 0000
Q ss_pred ----EEccc---------------c---ccccCc------------------cccHHHHH-------HhhCCCCCCCcHH
Q 048654 564 ----RYSQH---------------F---VDLLTM------------------EETPVSYL-------LRLHPDQEGLSKQ 596 (723)
Q Consensus 564 ----~~~q~---------------~---~~~~~~------------------~~~~~~~~-------~~~~~~~~~~~~~ 596 (723)
+.++. + ...+.. ..++.+.+ ..++... ....
T Consensus 710 ~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~--~~i~ 787 (1809)
T PRK00635 710 TKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDE--PSIH 787 (1809)
T ss_pred CcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccCHHHHhhccCCCCHHHHHHcCHHHHHHcccCh--HHHH
Confidence 11110 0 000000 00000000 0000000 0012
Q ss_pred HHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc---cCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEE
Q 048654 597 EAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM---SKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVV 670 (723)
Q Consensus 597 ~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~---~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVI 670 (723)
..+ .+|+.+||......+++.+|||||+|||+||++|+ .+|+||||||||+|||+.++..|.++|.++ +.|||
T Consensus 788 ~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVI 866 (1809)
T PRK00635 788 EKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVV 866 (1809)
T ss_pred HHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 234 57888999754235678999999999999999997 699999999999999999999999999876 35899
Q ss_pred EEecCHHHHHHhcCcCCCcEEEEEE------CCeEEecCCCHHHHHH
Q 048654 671 LVSHDSRLISRVCDDEERSEIWVVE------NGTVSRFPGTFEEYKE 711 (723)
Q Consensus 671 ivSHD~~~~~~~~d~~~~drv~vl~------~G~i~~~~g~~~~~~~ 711 (723)
+||||++++ .+|| +|++|. +|+++ ..|+++++..
T Consensus 867 iIsHdl~~i-~~aD-----rVi~L~p~gg~~~G~iv-~~Gtpeel~~ 906 (1809)
T PRK00635 867 IIEHNMHVV-KVAD-----YVLELGPEGGNLGGYLL-ASCSPEELIH 906 (1809)
T ss_pred EEeCCHHHH-HhCC-----EEEEEccCCCCCCCEEE-EeCCHHHHHh
Confidence 999999999 7884 999996 78887 5689888753
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-42 Score=350.80 Aligned_cols=196 Identities=34% Similarity=0.458 Sum_probs=162.8
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------eeEEEEcc
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------LRIGRYSQ 567 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------~~ig~~~q 567 (723)
.++.++++++.|++ ..+|+||||+|.+||+++|+||+|||||||||+|+|+.+|++|+|.+.++ ..++|++|
T Consensus 2 ~~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 2 ALLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred ceEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 46899999999986 46899999999999999999999999999999999999999999998775 36899999
Q ss_pred cc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 568 HF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 568 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
+. .+..++.+|+...+ .... .......+.+.++|+.+||.+.... .+.+|||||||||+|||||+.+|+||||||
T Consensus 80 ~~~LlPW~Tv~~NV~l~l-~~~~-~~~~e~~~~a~~~L~~VgL~~~~~~-~P~qLSGGMrQRVaiARAL~~~P~lLLlDE 156 (248)
T COG1116 80 EDALLPWLTVLDNVALGL-ELRG-KSKAEARERAKELLELVGLAGFEDK-YPHQLSGGMRQRVAIARALATRPKLLLLDE 156 (248)
T ss_pred cCcccchhhHHhhheehh-hccc-cchHhHHHHHHHHHHHcCCcchhhc-CccccChHHHHHHHHHHHHhcCCCEEEEcC
Confidence 75 34455555532221 1111 1111234578999999999887664 559999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEEC--CeE
Q 048654 646 PTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVEN--GTV 699 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~--G~i 699 (723)
|+++||..++..+.+.|.++ +.|||+||||.+++..++| ||++|.+ |+|
T Consensus 157 PFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~Lsd-----Rivvl~~~P~~i 211 (248)
T COG1116 157 PFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLAD-----RVVVLSNRPGRI 211 (248)
T ss_pred CcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhC-----EEEEecCCCcce
Confidence 99999999988888777654 5799999999999999985 9999998 445
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-43 Score=351.60 Aligned_cols=204 Identities=28% Similarity=0.440 Sum_probs=174.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
||+++||++.|++. .+++|+||+|+.||+++|+||+||||||+||+|.+++.|++|+|++++. .+||
T Consensus 1 MI~~~nvsk~y~~~--~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 1 MIEFENVSKRYGNK--KAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred CceeeeeehhcCCc--eeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 68999999999854 5899999999999999999999999999999999999999999998874 3699
Q ss_pred EEccc--cccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCC-CCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 564 RYSQH--FVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPS-HNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 564 ~~~q~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~-~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
|+-|. +++++++.+|.... |...++. ..+++.++|..+||+. ...++.+.+|||||||||.+||||+.+
T Consensus 79 YviQqigLFPh~Tv~eNIa~V-----P~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAad 153 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATV-----PKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAAD 153 (309)
T ss_pred hhhhhcccCCCccHHHHHHhh-----hhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcC
Confidence 99986 46677777764321 2222222 3456889999999975 355577799999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+|||+||||++|||.++..+.+.+.++ +.|||+||||++++.+++| ||++|++|+|+-| ++|+++..
T Consensus 154 P~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLad-----ri~vm~~G~i~Q~-~~P~~il~ 225 (309)
T COG1125 154 PPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLAD-----RIAVMDAGEIVQY-DTPDEILA 225 (309)
T ss_pred CCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhc-----eEEEecCCeEEEe-CCHHHHHh
Confidence 9999999999999999999988887654 5799999999999999995 9999999999866 78777643
No 54
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-43 Score=347.83 Aligned_cols=203 Identities=31% Similarity=0.446 Sum_probs=168.6
Q ss_pred CeEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 494 PLLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
++|+++|+++.|+.+. ..+|++|||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++++
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 5899999999998642 14899999999999999999999999999999999999999999999883
Q ss_pred eeEEEEccccccccCccccHHHHHHhhCCCCCCC-cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 560 LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGL-SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 560 ~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
..+.++||++...+....++-..+.... ...+. ..++++.++|+.+||+.....+.+.+|||||+|||||||||+.+|
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl-~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~P 160 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPL-RPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEP 160 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhh-ccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCC
Confidence 2467899987655544333222111111 11121 134558999999999877666777999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEec
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRF 702 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~ 702 (723)
++|||||||++||+..+..++++|.++. -|+|+||||+..+..+|| ||+||++|+|++.
T Consensus 161 klLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cd-----Ri~Vm~~G~ivE~ 223 (252)
T COG1124 161 KLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCD-----RIAVMDNGQIVEI 223 (252)
T ss_pred CEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhh-----heeeeeCCeEEEe
Confidence 9999999999999999999999997764 599999999999999995 9999999999874
No 55
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.2e-42 Score=346.07 Aligned_cols=198 Identities=34% Similarity=0.491 Sum_probs=164.3
Q ss_pred eEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 495 LLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
+++++||++.|+... ..+|++|||+|++||+++|+||+||||||||++|.|+.+|++|.|++.+.
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 467999999996432 35899999999999999999999999999999999999999999988762
Q ss_pred --eeEEEEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 560 --LRIGRYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 560 --~~ig~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
..+||++|.+ .+.+++.+|+...+ .+.....+ .....+..+++.+||.+...++++.+|||||||||+|||||+
T Consensus 81 R~~~iGfvFQ~~nLl~~ltv~ENv~lpl-~~~~~~~~-~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 81 RRKKIGFVFQNFNLLPDLTVLENVELPL-LIAGKSAG-RRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHhEEEECccCCCCCCCCHHHHHHhHH-HHcCCChh-HHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 2599999975 45566666643221 11111111 235667889999999876665677999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEE
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVS 700 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~ 700 (723)
.+|+|||+||||.+||..+.+.++++|.++. .||||||||...+. +| ||++.|.+|++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~-----dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YA-----DRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hC-----CEEEEEeCCeee
Confidence 9999999999999999999999999998873 59999999999886 67 599999999964
No 56
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=344.86 Aligned_cols=219 Identities=28% Similarity=0.454 Sum_probs=169.4
Q ss_pred cceEEEeEEEEeCCee----eeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 164 KDITIDNFSVAARGKE----LLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~----vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
++|+++|+++.|++.. +|++|||+|.+||++||||+||||||||+++|+|+..| ..|+|.+.+.......+..
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~~~~~~~- 78 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLAPKKRAK- 78 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccCccccch-
Confidence 4699999999999877 99999999999999999999999999999999998765 5667777776554332211
Q ss_pred HHHHHhhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 240 QAVVSAHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
..+..+.++ |+.... ..+...+.+-+. +.+...+....+.++.++|+.+|+...+.+|++
T Consensus 79 -----------~~~~~VQmVFQDp~~S-----LnP~~tv~~~l~---Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P 139 (252)
T COG1124 79 -----------AFYRPVQMVFQDPYSS-----LNPRRTVGRILS---EPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP 139 (252)
T ss_pred -----------hhccceeEEecCCccc-----cCcchhHHHHHh---hhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc
Confidence 111222222 221111 111122233222 223323345566679999999999998999999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
.+|||||+|||||||||+.+|++|||||||++||+..+..++++|.+. +.|+|+||||+..+..+||||+||++|+
T Consensus 140 ~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ 219 (252)
T COG1124 140 HELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQ 219 (252)
T ss_pred hhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCe
Confidence 999999999999999999999999999999999999999999988754 5699999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++.. ++..++
T Consensus 220 ivE~-~~~~~l 229 (252)
T COG1124 220 IVEI-GPTEEL 229 (252)
T ss_pred EEEe-echhhh
Confidence 9854 444443
No 57
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-42 Score=347.43 Aligned_cols=200 Identities=30% Similarity=0.417 Sum_probs=155.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.+.++++++.|++..+|+||||+|.+||+++||||||||||||||+|+|+..| ..|+|.+.++.+.+....
T Consensus 3 ~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v~~p~~~------- 73 (248)
T COG1116 3 LLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPVTGPGPD------- 73 (248)
T ss_pred eEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCcccCCCCCC-------
Confidence 58999999999999999999999999999999999999999999999998765 555666666655332211
Q ss_pred hhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 245 AHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
++++ |+..+. +...+.+++...... ......+..+++.++|+.+||.. ..+++|++|||
T Consensus 74 -----------~~~vFQ~~~Ll-------PW~Tv~~NV~l~l~~-~~~~~~e~~~~a~~~L~~VgL~~-~~~~~P~qLSG 133 (248)
T COG1116 74 -----------IGYVFQEDALL-------PWLTVLDNVALGLEL-RGKSKAEARERAKELLELVGLAG-FEDKYPHQLSG 133 (248)
T ss_pred -----------EEEEeccCccc-------chhhHHhhheehhhc-cccchHhHHHHHHHHHHHcCCcc-hhhcCccccCh
Confidence 0111 111110 011222222211111 11234556679999999999974 56899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR----WKKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~----~~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
||||||+|||||+.+|+||||||||++||..++..+++.|.+ .+.|||+||||++++..++|||++|.++
T Consensus 134 GMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 134 GMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999999999999887777654 4689999999999999999999999984
No 58
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=7.6e-41 Score=397.88 Aligned_cols=330 Identities=25% Similarity=0.322 Sum_probs=222.0
Q ss_pred HHHHhCCCCccccCCCCCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCC
Q 048654 302 KILAGLGFTKEMQGRPTKSFSGGWRMRISLARALFVQP--TLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHD 376 (723)
Q Consensus 302 ~~L~~lgl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P--~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHd 376 (723)
++|..+||.....++++.+|||||+|||+||++|+.+| .||||||||++||+..+.+|.++|+++ +.|||+|+||
T Consensus 469 ~~L~~vgL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd 548 (924)
T TIGR00630 469 GFLIDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHD 548 (924)
T ss_pred HhHhhccccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence 34677788643257999999999999999999999986 899999999999999999999998765 6799999999
Q ss_pred HHHHHhhCCEEEEE------eCCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHHHHHHHHHH
Q 048654 377 RDFLNTVCTEIIHL------HDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKVKDRAKSAA 450 (723)
Q Consensus 377 l~~l~~iad~Ii~L------~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (723)
++++. +||+|++| ++|+|+ +.|+++++..... .+... .+.
T Consensus 549 ~~~i~-~aD~vi~LgpgaG~~~G~Iv-~~g~~~el~~~~~----~lt~~---------------------~l~------- 594 (924)
T TIGR00630 549 EETIR-AADYVIDIGPGAGIHGGEVV-ASGTPEEILANPD----SLTGQ---------------------YLS------- 594 (924)
T ss_pred HHHHh-hCCEEEEecccccCCCCEEe-eccCHHHHhcCch----heeee---------------------ccc-------
Confidence 99997 89999999 899986 5577655421100 00000 000
Q ss_pred HHHHhhhhccCcccCCCCCCCCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEc
Q 048654 451 AKEASKNKAKGKVDEDEPLPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVG 530 (723)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvG 530 (723)
. . .....+.. ......++|+++|++. ..|+|+||+|+.|++++|+|
T Consensus 595 --------~--~-----~~~~~~~~------------~~~~~~~~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtG 640 (924)
T TIGR00630 595 --------G--K-----KKIEVPKE------------RRPGNGKFLTLKGARE-------NNLKNITVSIPLGLFTCITG 640 (924)
T ss_pred --------c--c-----cccccccc------------ccCCCcceEEEEeCcc-------CCcCceEEEEeCCCEEEEEC
Confidence 0 0 00000000 0001234789999873 14899999999999999999
Q ss_pred CCCCcHHHHHH-HHH--------c-CCCCC-cce----------EEECCc-------e----------------------
Q 048654 531 PNGAGKSTLLN-LLA--------G-DLSPT-EGE----------VRRSQK-------L---------------------- 560 (723)
Q Consensus 531 pNGsGKSTLlk-~L~--------G-l~~p~-~G~----------I~~~~~-------~---------------------- 560 (723)
+||||||||++ +|. + ..+|. ... |.++.+ .
T Consensus 641 vsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a 720 (924)
T TIGR00630 641 VSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKVIHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEA 720 (924)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCceEEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCcc
Confidence 99999999998 331 1 11110 011 111100 0
Q ss_pred -----------------------eEEEEccc--cccccCc----------c----------ccH-------HHHHHhhCC
Q 048654 561 -----------------------RIGRYSQH--FVDLLTM----------E----------ETP-------VSYLLRLHP 588 (723)
Q Consensus 561 -----------------------~ig~~~q~--~~~~~~~----------~----------~~~-------~~~~~~~~~ 588 (723)
..|++..+ |.....+ . .+. +.....++.
T Consensus 721 ~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~ 800 (924)
T TIGR00630 721 KARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFE 800 (924)
T ss_pred ccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHH
Confidence 00110000 0000000 0 000 000000000
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc---CCCeEEeccCCCCCCHHHHHHHHHHHHHc
Q 048654 589 DQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS---KPHILLLDEPTNHLDMQSIDALADALDEF 665 (723)
Q Consensus 589 ~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~---~p~lLlLDEPT~~LD~~s~~~l~~~L~~~ 665 (723)
.. ........+|..|||......+++.+|||||+|||.||++|+. +|+||||||||+|||+.++..|.++|.++
T Consensus 801 ~~---~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l 877 (924)
T TIGR00630 801 AV---PSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRL 877 (924)
T ss_pred hc---cchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 00 0111234678889997543457789999999999999999997 59999999999999999999999999887
Q ss_pred ---CceEEEEecCHHHHHHhcCcCCCcEEEEE------ECCeEEecCCCHHHH
Q 048654 666 ---TGGVVLVSHDSRLISRVCDDEERSEIWVV------ENGTVSRFPGTFEEY 709 (723)
Q Consensus 666 ---~~tVIivSHD~~~~~~~~d~~~~drv~vl------~~G~i~~~~g~~~~~ 709 (723)
+.|||+||||++++. .| |+|++| ++|+|+ +.|+++++
T Consensus 878 ~~~G~TVIvi~H~~~~i~-~a-----D~ii~Lgp~~G~~gG~iv-~~G~~~~l 923 (924)
T TIGR00630 878 VDQGNTVVVIEHNLDVIK-TA-----DYIIDLGPEGGDGGGTIV-ASGTPEEV 923 (924)
T ss_pred HhCCCEEEEEeCCHHHHH-hC-----CEEEEecCCccCCCCEEE-EeCCHHHh
Confidence 369999999999985 57 499999 689997 56887654
No 59
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-42 Score=348.09 Aligned_cols=219 Identities=26% Similarity=0.373 Sum_probs=161.9
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+.|+++|+++.|++.++|+||||+|++|++++||||||||||||+|+|+|+..|..| +|.+.+........
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G--~i~~~g~~~~~~~~------- 73 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSG--EIKIFGKPVRKRRK------- 73 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcc--eEEEcccccccccc-------
Confidence 469999999999976899999999999999999999999999999999998766554 44444433221110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHH-HHHH--HhcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAEL-YEKL--QILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l--~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
...++++++....+... ...+.+.+... +... .........+.+.++|+++|+. +..++++.+
T Consensus 74 ---------~~~IgYVPQ~~~~d~~f----P~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~~r~i~~ 139 (254)
T COG1121 74 ---------RLRIGYVPQKSSVDRSF----PITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLRDRQIGE 139 (254)
T ss_pred ---------CCeEEEcCcccccCCCC----CcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhhCCcccc
Confidence 01122333221111000 01111111110 0111 1111234478899999999997 567899999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
|||||+|||.|||||+++|+||||||||+|+|+.++..|.++|+++ ++|||+||||++.+..+||+|+.|+.. ++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~~-~~- 217 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNRH-LI- 217 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcCe-eE-
Confidence 9999999999999999999999999999999999999999998765 679999999999999999999999865 43
Q ss_pred ecCChhhHHh
Q 048654 398 YRGNFDDFES 407 (723)
Q Consensus 398 ~~g~~~~~~~ 407 (723)
+.|+++++..
T Consensus 218 ~~G~~~~~~~ 227 (254)
T COG1121 218 ASGPPEEVLT 227 (254)
T ss_pred eccChhhccC
Confidence 4588777643
No 60
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-42 Score=338.33 Aligned_cols=222 Identities=27% Similarity=0.366 Sum_probs=175.9
Q ss_pred cceEEEeEEEEe-CCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 164 KDITIDNFSVAA-RGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 164 ~~I~l~nls~~y-~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
++|+++||++.| +++++|+||||+|++||+++|||+||||||||||+|+|+.. ++.|+|.+.+.++.....
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~------ 73 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKG------ 73 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccch------
Confidence 469999999999 78899999999999999999999999999999999998654 566677776665554332
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHH-------HHHHHHhcCchHHHHHHHHHHHhCCCCccccC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAE-------LYEKLQILGSDAAEAQASKILAGLGFTKEMQG 315 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~ 315 (723)
.+...++..++++.+..... ....+.+++.. .+..+..+...+.+.++.++|+++|+.+. ..
T Consensus 74 ----k~lr~~r~~iGmIfQ~~nLv------~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-A~ 142 (258)
T COG3638 74 ----KELRKLRRDIGMIFQQFNLV------PRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-AY 142 (258)
T ss_pred ----HHHHHHHHhceeEeccCCcc------cccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-HH
Confidence 23445566666654322211 11122222211 12223334456778899999999999754 45
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEe
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLH 391 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~ 391 (723)
.+..+|||||+|||+|||||+++|+|||.|||+++|||.+...++++|++. +.|||+..|+++++.++||||+-|+
T Consensus 143 qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~ 222 (258)
T COG3638 143 QRASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLK 222 (258)
T ss_pred HHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEec
Confidence 889999999999999999999999999999999999999999999999865 6899999999999999999999999
Q ss_pred CCEEEEecCChhhH
Q 048654 392 DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 ~G~i~~~~g~~~~~ 405 (723)
+|+++ |.|+..+.
T Consensus 223 ~G~iv-fDg~~~el 235 (258)
T COG3638 223 AGRIV-FDGPASEL 235 (258)
T ss_pred CCcEE-EeCChhhh
Confidence 99996 67887765
No 61
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=347.20 Aligned_cols=209 Identities=36% Similarity=0.508 Sum_probs=176.3
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------ee
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ 561 (723)
+++.+++++|.|+++ ..+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|.|.+++. .+
T Consensus 2 ~~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 2 RMIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred ceEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 478999999999876 57899999999999999999999999999999999999999999987663 35
Q ss_pred EEEEccccccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
+|+++|++..++... ++... ..+.+...+.. ...++..+|..+|+.+.. ++++.+|||||||||+||.+|+++|
T Consensus 81 vG~VfQnpd~q~~~~-tV~~e-vafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~-~r~p~~LSGGqkqRvaIA~vLa~~P 157 (235)
T COG1122 81 VGLVFQNPDDQLFGP-TVEDE-VAFGLENLGLPREEIEERVAEALELVGLEELL-DRPPFNLSGGQKQRVAIAGVLAMGP 157 (235)
T ss_pred eEEEEECcccccccC-cHHHH-HhhchhhcCCCHHHHHHHHHHHHHHcCchhhc-cCCccccCCcceeeHHhhHHHHcCC
Confidence 899999876554432 32332 22222223332 245688899999998764 5778999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
++|||||||++||+.+++.+++.|+++. .|||+||||++++..+|| |+|+|++|+++ +.|++.++...
T Consensus 158 ~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad-----~v~vl~~G~i~-~~g~p~~i~~~ 229 (235)
T COG1122 158 EILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYAD-----RVVVLDDGKIL-ADGDPAEIFND 229 (235)
T ss_pred CEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCC-----EEEEEECCEEe-ecCCHHHHhhh
Confidence 9999999999999999999999999874 489999999999999995 99999999997 57888777654
No 62
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.5e-41 Score=325.75 Aligned_cols=200 Identities=31% Similarity=0.455 Sum_probs=166.7
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~ 560 (723)
||+++||++.|++. ..+|+||||+|.+||++-|+||+|||||||||+|++..+|++|+|++++. .
T Consensus 1 mI~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 1 MIRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred CeeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 68999999999976 57999999999999999999999999999999999999999999998652 3
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
+||+++|++. ...++.+|+. +.+..... ......+++.+.|+.+||.+....-| .+|||||||||+||||++.+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA-~pL~v~G~-~~~~i~~rV~~~L~~VgL~~k~~~lP-~~LSGGEQQRvaIARAiV~~P 156 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVA-LPLRVIGK-PPREIRRRVSEVLDLVGLKHKARALP-SQLSGGEQQRVAIARAIVNQP 156 (223)
T ss_pred eeeeEeeeccccccchHhhhhh-hhhhccCC-CHHHHHHHHHHHHHHhccchhhhcCc-cccCchHHHHHHHHHHHccCC
Confidence 6999999863 3344555532 22221111 01123466889999999987765444 799999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecC
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFP 703 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~ 703 (723)
.+||.||||.+|||.....|++++.+++ .||||.|||.+++.++- .|++.+++|+++.++
T Consensus 157 ~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~-----~rvl~l~~Grl~~d~ 219 (223)
T COG2884 157 AVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMR-----HRVLALEDGRLVRDE 219 (223)
T ss_pred CeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhcc-----CcEEEEeCCEEEecc
Confidence 9999999999999999999999988875 58999999999999875 599999999998653
No 63
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-41 Score=360.79 Aligned_cols=209 Identities=31% Similarity=0.465 Sum_probs=175.0
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEE
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIG 563 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig 563 (723)
.+.|+++||++.|++ ..+++||||+|.+||+++|+||||||||||||+|+|+..|++|+|.++++ ..+|
T Consensus 3 ~~~l~i~~v~k~yg~--~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 3 KPALEIRNVSKSFGD--FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred CceEEEEeeeeecCC--eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 468999999999984 46899999999999999999999999999999999999999999998874 3689
Q ss_pred EEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
++||+. ++++++.+|+ .|-+............+++.++|+.++|.+... +.+.+|||||||||+|||||+.+|++|
T Consensus 81 ~VFQ~YALFPHltV~~NV-afGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~-R~p~qLSGGQqQRVALARAL~~~P~vL 158 (352)
T COG3842 81 MVFQSYALFPHMTVEENV-AFGLKVRKKLKKAEIKARVEEALELVGLEGFAD-RKPHQLSGGQQQRVALARALVPEPKVL 158 (352)
T ss_pred eeecCcccCCCCcHHHHh-hhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhh-hChhhhChHHHHHHHHHHHhhcCcchh
Confidence 999974 6778888874 333331111111113457899999999988665 566999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHH----cCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDE----FTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~----~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||.++||..-+..+...|++ .+.|.|+||||.+++..++| ||.||++|+|.- -|+|+++..
T Consensus 159 LLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msD-----rI~Vm~~G~I~Q-~gtP~eiY~ 226 (352)
T COG3842 159 LLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSD-----RIAVMNDGRIEQ-VGTPEEIYE 226 (352)
T ss_pred hhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcc-----ceEEccCCceee-cCCHHHHhh
Confidence 99999999999887777666655 45799999999999999995 999999999974 588888643
No 64
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-40 Score=334.48 Aligned_cols=212 Identities=26% Similarity=0.373 Sum_probs=162.8
Q ss_pred ceEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 165 DITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 165 ~I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
+|+++||++.|+. ..+|++|||+|++||+++|+|||||||||||++|.|+..| +.|.+.+.+.++...+...+.
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~ 78 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELA 78 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHH
Confidence 3679999999953 3799999999999999999999999999999999988665 566777777776544332211
Q ss_pred HHHHhhHHHHHHHHHHHhhhc-CcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 241 AVVSAHEELVKLREEVASLQN-STSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
. .-+..++++.+ ..+. +...+.+++.... .+..........++..+++.+|+.+...++++.
T Consensus 79 ~---------~R~~~iGfvFQ~~nLl-------~~ltv~ENv~lpl-~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~ 141 (226)
T COG1136 79 K---------LRRKKIGFVFQNFNLL-------PDLTVLENVELPL-LIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPS 141 (226)
T ss_pred H---------HHHHhEEEECccCCCC-------CCCCHHHHHHhHH-HHcCCChhHHHHHHHHHHHhcCChhhhccCCch
Confidence 1 12334555533 2222 2233444443222 122222224577889999999998665558899
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+|||||||||||||||+.+|+|||.||||.+||..+...++++|.++ +.||||||||...+. +|||++.|.+|++
T Consensus 142 eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 142 ELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKI 220 (226)
T ss_pred hcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCee
Confidence 99999999999999999999999999999999999999999988765 579999999999887 6999999999985
Q ss_pred E
Q 048654 396 H 396 (723)
Q Consensus 396 ~ 396 (723)
.
T Consensus 221 ~ 221 (226)
T COG1136 221 E 221 (226)
T ss_pred e
Confidence 3
No 65
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=324.93 Aligned_cols=223 Identities=26% Similarity=0.340 Sum_probs=177.9
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCC---cEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPK---NIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~---~~~i~~~~q~~~~~~~~~~~ 240 (723)
..|+++||++.||.+.+|+|||+.|++++++|||||||||||||||+|++.....|+ +|+|.+.++++.....
T Consensus 6 ~~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~---- 81 (253)
T COG1117 6 PAIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKV---- 81 (253)
T ss_pred ceeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCC----
Confidence 458999999999999999999999999999999999999999999999988766654 3788888887764422
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
+...++..++++.+... ++ ...+.++++.... +..+.....++.++..|....|.+ +..++.
T Consensus 82 -------d~~~lRr~vGMVFQkPn------PF-p~SIydNVayG~r-~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~s 146 (253)
T COG1117 82 -------DVVELRRRVGMVFQKPN------PF-PMSIYDNVAYGLR-LHGIKDKELDEIVESSLKKAALWDEVKDRLHKS 146 (253)
T ss_pred -------CHHHHHHHheeeccCCC------CC-CchHHHHHHHhHH-hhccchHHHHHHHHHHHHHhHhHHHhHHHhhCC
Confidence 22356777777644321 12 1344555544332 222223556677888888877753 334678
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--cEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWK--KTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~--~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
...||||||||++|||||+.+|+|||||||||+|||.+...+.+++.+++ -|||+|||++..+.+++|++.++..|++
T Consensus 147 a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~L 226 (253)
T COG1117 147 ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGEL 226 (253)
T ss_pred ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEE
Confidence 88999999999999999999999999999999999999999999998875 4999999999999999999999999999
Q ss_pred EEecCChhhHH
Q 048654 396 HFYRGNFDDFE 406 (723)
Q Consensus 396 ~~~~g~~~~~~ 406 (723)
++| |+.+.+.
T Consensus 227 vE~-g~T~~iF 236 (253)
T COG1117 227 VEF-GPTDKIF 236 (253)
T ss_pred EEE-cCHHhhh
Confidence 987 5555443
No 66
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-40 Score=352.71 Aligned_cols=209 Identities=31% Similarity=0.472 Sum_probs=175.4
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIG 563 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig 563 (723)
.+++++||++.|++. ..+|+||||+|++|+++||+||||||||||||+|+|+++|++|+|.+.+. .++|
T Consensus 3 ~~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 3 EVIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred ceeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 367889999999831 35899999999999999999999999999999999999999999998762 3589
Q ss_pred EEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
|++|.+ .+.+++.++. .+....+.... ....+.++++|+.|||.... ++++.+||+||||||.||+||+.+|+||
T Consensus 82 y~~~~~~~~~~lT~~e~l-~~~~~l~~~~~-~~~~~~~~~~l~~~~L~~~~-~~~~~~lS~G~kqrl~ia~aL~~~P~ll 158 (293)
T COG1131 82 YVPQEPSLYPELTVRENL-EFFARLYGLSK-EEAEERIEELLELFGLEDKA-NKKVRTLSGGMKQRLSIALALLHDPELL 158 (293)
T ss_pred EEccCCCCCccccHHHHH-HHHHHHhCCCh-hHHHHHHHHHHHHcCCchhh-CcchhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999974 4556665553 33333332211 12356789999999998744 5788999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
||||||+|||+.++..+.++|+++. .|||++||.++.+..+|| +|++|++|+++ +.|+++++...
T Consensus 159 iLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d-----~v~il~~G~~~-~~g~~~~l~~~ 227 (293)
T COG1131 159 ILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCD-----RVIILNDGKII-AEGTPEELKEK 227 (293)
T ss_pred EECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCC-----EEEEEeCCEEE-EeCCHHHHHHh
Confidence 9999999999999999999999873 389999999999999995 99999999997 45788876554
No 67
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-41 Score=356.95 Aligned_cols=218 Identities=25% Similarity=0.333 Sum_probs=173.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
..|+++||+++|++..+|+|+||+|.+||+++|+||||||||||||+|+|+.. |++|.|.+.++.+.+.....
T Consensus 4 ~~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~k----- 76 (352)
T COG3842 4 PALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEK----- 76 (352)
T ss_pred ceEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhh-----
Confidence 46999999999999999999999999999999999999999999999999875 45677888888876543221
Q ss_pred HhhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 244 SAHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
+.++++ |+..+ ++...+.+++++.+........++..+++.++|+.+++.. ..+|++.+||
T Consensus 77 ----------R~ig~VFQ~YAL-------FPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~-~~~R~p~qLS 138 (352)
T COG3842 77 ----------RPIGMVFQSYAL-------FPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEG-FADRKPHQLS 138 (352)
T ss_pred ----------cccceeecCccc-------CCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchh-hhhhChhhhC
Confidence 122222 22211 1233455666554441112233457789999999999975 5689999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLC----RWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~----~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||||||||+.+|+|||||||.++||..-+..++..|+ +.+.|.|+||||.+++..++|||++|++|+|..
T Consensus 139 GGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q- 217 (352)
T COG3842 139 GGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQ- 217 (352)
T ss_pred hHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceee-
Confidence 999999999999999999999999999999988777666555 457899999999999999999999999999964
Q ss_pred cCChhhHHh
Q 048654 399 RGNFDDFES 407 (723)
Q Consensus 399 ~g~~~~~~~ 407 (723)
.|++++++.
T Consensus 218 ~gtP~eiY~ 226 (352)
T COG3842 218 VGTPEEIYE 226 (352)
T ss_pred cCCHHHHhh
Confidence 577766643
No 68
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=341.32 Aligned_cols=207 Identities=28% Similarity=0.392 Sum_probs=171.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRI 562 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~i 562 (723)
+|+++++++.|+.. .+++||||+|+.||.+||+|||||||||||++|+|++.|+.|.|.++++ .+|
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~V 79 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKV 79 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcce
Confidence 57889999999863 5799999999999999999999999999999999999999999998875 369
Q ss_pred EEEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 563 GRYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 563 g~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
|+++|+. +.++++.+|+...+..............++.++|..+.|.+... +.+.+|||||||||||||||+..|++
T Consensus 80 GfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-ryP~QLSGGQrQRVALARALA~eP~v 158 (345)
T COG1118 80 GFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-RYPAQLSGGQRQRVALARALAVEPKV 158 (345)
T ss_pred eEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-cCchhcChHHHHHHHHHHHhhcCCCe
Confidence 9999984 45667776643222111111111124567888999999987655 55689999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||||||+++||...+..|...|+++ +.|+|+||||.+++.++|| ||++|++|+|.. .|+++++.
T Consensus 159 LLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~lad-----rvvvl~~G~Ieq-vg~p~ev~ 226 (345)
T COG1118 159 LLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELAD-----RVVVLNQGRIEQ-VGPPDEVY 226 (345)
T ss_pred EeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcc-----eEEEecCCeeee-eCCHHHHh
Confidence 9999999999999988888777664 5799999999999999995 999999999975 47887764
No 69
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.9e-40 Score=351.65 Aligned_cols=210 Identities=25% Similarity=0.368 Sum_probs=172.2
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------ee
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LR 561 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ 561 (723)
..++|+++||++.|++ ..+|+||||+|.+|+++||+||||||||||+++|+|+++|++|+|++++. .+
T Consensus 4 ~~~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ 81 (306)
T PRK13537 4 SVAPIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQR 81 (306)
T ss_pred CCceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhc
Confidence 3468999999999975 35899999999999999999999999999999999999999999998763 35
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
+||++|... ..+++.++... ....+.. ........+.++++.++|.... ++++..|||||||||+||+||+.+|+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~-~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~aL~~~P~ 158 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLV-FGRYFGL-SAAAARALVPPLLEFAKLENKA-DAKVGELSGGMKRRLTLARALVNDPD 158 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHH-HHHHcCC-CHHHHHHHHHHHHHHcCCchHh-cCchhhCCHHHHHHHHHHHHHhCCCC
Confidence 899999742 23444444221 1112111 0011234567889999997544 46789999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
+|||||||+|||+.++..+.++|+++ +.|||++||+++++..+|| +|++|++|+++ +.|+++++...
T Consensus 159 lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d-----~i~il~~G~i~-~~g~~~~l~~~ 228 (306)
T PRK13537 159 VLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCD-----RLCVIEEGRKI-AEGAPHALIES 228 (306)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC-----EEEEEECCEEE-EECCHHHHHhc
Confidence 99999999999999999999999887 3589999999999999995 99999999997 46888887543
No 70
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.4e-40 Score=355.67 Aligned_cols=207 Identities=28% Similarity=0.396 Sum_probs=168.1
Q ss_pred eEEEEEEEEEcCCC--cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 495 LLQLIEVSFSYPNR--EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~--~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
||+++||++.|++. ...+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 58999999999632 236899999999999999999999999999999999999999999988653
Q ss_pred -eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 560 -LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 560 -~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
..++|++|++. ...++.++.. +.+.... .......+++.++|+.+||.+.. ++++.+|||||||||+|||||+.
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~-~~~~~~~-~~~~~~~~~v~e~l~~vgL~~~~-~~~~~~LSgGqkQRV~IARAL~~ 157 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVA-LPLELDN-TPKDEIKRKVTELLALVGLGDKH-DSYPSNLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHHHHh
Confidence 25899999853 2233444422 1111111 10011234578899999997654 46679999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+|+||||||||++||+.+...+.++|+++ +.|||+||||++.+.++|| +|++|++|+|+. .|+++++.
T Consensus 158 ~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d-----~v~vl~~G~iv~-~g~~~~v~ 229 (343)
T TIGR02314 158 NPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICD-----CVAVISNGELIE-QGTVSEIF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHH
Confidence 99999999999999999999999999876 4699999999999999995 999999999985 57776653
No 71
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-40 Score=339.33 Aligned_cols=205 Identities=34% Similarity=0.422 Sum_probs=164.3
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------ee
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------LR 561 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~~ 561 (723)
|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 468999999975 35899999999999999999999999999999999999999999987652 24
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
++|++|... ..+++.++.... ...+...........+..+++.+||.... .+++.+|||||||||+|||||+.+|+
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~ia~al~~~p~ 156 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFP-LREHTRLSEEEIREIVLEKLEAVGLRGAE-DLYPAELSGGMKKRVALARALALDPE 156 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHH-HhhccCCCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 789998742 222333332111 11111110001234577889999997654 46779999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+|| +|++|++|+++ +.|+++++.
T Consensus 157 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d-----~v~~l~~G~i~-~~g~~~~~~ 225 (235)
T cd03261 157 LLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIAD-----RIAVLYDGKIV-AEGTPEELR 225 (235)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcC-----EEEEEECCeEE-EecCHHHHc
Confidence 99999999999999999999999875 4689999999999999995 99999999997 467877654
No 72
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-40 Score=337.30 Aligned_cols=221 Identities=31% Similarity=0.425 Sum_probs=171.5
Q ss_pred cceEEEeEEEEeCCe-eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 164 KDITIDNFSVAARGK-ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 164 ~~I~l~nls~~y~~~-~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
++++++++++.|++. .+|+++||+|.+|++++|+|+||||||||+++|+|++.|..| .|.+.+.....
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G--~v~~~g~~~~~--------- 70 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSG--EVLVDGLDTSS--------- 70 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCC--EEEECCeeccc---------
Confidence 468999999999775 999999999999999999999999999999999999876554 45433333221
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
......+++.++++.+.... ......+.+.+++....+ .+..++.++++.++|+.+|+... .++++..||
T Consensus 71 ---~~~~~~~~~~vG~VfQnpd~-----q~~~~tV~~evafg~~n~-g~~~~e~~~rv~~~l~~vgl~~~-~~r~p~~LS 140 (235)
T COG1122 71 ---EKSLLELRQKVGLVFQNPDD-----QLFGPTVEDEVAFGLENL-GLPREEIEERVAEALELVGLEEL-LDRPPFNLS 140 (235)
T ss_pred ---hhhHHHhhcceEEEEECccc-----ccccCcHHHHHhhchhhc-CCCHHHHHHHHHHHHHHcCchhh-ccCCccccC
Confidence 01122345555554332111 011123344444433332 23345688999999999999754 689999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||+||.+|+++|++|||||||++||+.++.++.++|+++ ++|||+||||++++..+||++++|++|+++ +
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~-~ 219 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKIL-A 219 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEe-e
Confidence 99999999999999999999999999999999999999999876 469999999999999999999999999996 5
Q ss_pred cCChhhHH
Q 048654 399 RGNFDDFE 406 (723)
Q Consensus 399 ~g~~~~~~ 406 (723)
.|++.++.
T Consensus 220 ~g~p~~i~ 227 (235)
T COG1122 220 DGDPAEIF 227 (235)
T ss_pred cCCHHHHh
Confidence 67765543
No 73
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.4e-40 Score=334.32 Aligned_cols=197 Identities=30% Similarity=0.426 Sum_probs=159.6
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~ 560 (723)
||+++|+++.|++....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 58899999999643235899999999999999999999999999999999999999999988763 1
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
.++|++|+.. ..+++.++... ...... .......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~-~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~~p 157 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAF-PLRIIG-VPPRDANERVSAALEKVGLEGKA-HALPMQLSGGEQQRVAIARAIVHKP 157 (216)
T ss_pred hceEEecCccccccccHHHHHHH-HHHhcC-CCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCC
Confidence 4789998742 22333333211 111111 00001235678899999997654 4567999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+|
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d-----~i~~l~~G~i 216 (216)
T TIGR00960 158 PLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRH-----RTLTLSRGRL 216 (216)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEeCCcC
Confidence 999999999999999999999999887 4689999999999999995 9999999975
No 74
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.2e-39 Score=353.34 Aligned_cols=211 Identities=26% Similarity=0.370 Sum_probs=172.8
Q ss_pred CCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------e
Q 048654 491 LTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------L 560 (723)
Q Consensus 491 ~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~ 560 (723)
++.++|+++||++.|++. .+|+||||+|.+|+++||+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 37 ~~~~~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~ 114 (340)
T PRK13536 37 MSTVAIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARA 114 (340)
T ss_pred CCceeEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhc
Confidence 346789999999999853 5899999999999999999999999999999999999999999998763 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
.+||++|... ..+++.++... ....+.. ........+..+++.++|.... ++++.+|||||||||+||+||+.+|
T Consensus 115 ~ig~v~q~~~~~~~~tv~e~l~~-~~~~~~~-~~~~~~~~~~~ll~~~~L~~~~-~~~~~~LS~G~kqrv~lA~aL~~~P 191 (340)
T PRK13536 115 RIGVVPQFDNLDLEFTVRENLLV-FGRYFGM-STREIEAVIPSLLEFARLESKA-DARVSDLSGGMKRRLTLARALINDP 191 (340)
T ss_pred cEEEEeCCccCCCCCcHHHHHHH-HHHHcCC-CHHHHHHHHHHHHHHcCCchhh-CCChhhCCHHHHHHHHHHHHHhcCC
Confidence 5899999742 23344443221 1112211 0011234567889999997654 4678999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
+||||||||+|||+.++..+.++|+++ +.|||++||+++++.++|| +|++|++|+|+ +.|+++++...
T Consensus 192 ~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d-----~i~il~~G~i~-~~g~~~~l~~~ 262 (340)
T PRK13536 192 QLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCD-----RLCVLEAGRKI-AEGRPHALIDE 262 (340)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC-----EEEEEECCEEE-EEcCHHHHHhh
Confidence 999999999999999999999999887 3689999999999999995 99999999997 56888887543
No 75
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-40 Score=350.05 Aligned_cols=206 Identities=30% Similarity=0.422 Sum_probs=172.7
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRY 565 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~ 565 (723)
.|+++||++.|++.. +|++|||+|..||+++|+||||||||||||+|+|+.+|++|+|+++++ ..++++
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamV 80 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMV 80 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEE
Confidence 689999999998632 899999999999999999999999999999999999999999998874 369999
Q ss_pred cccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEe
Q 048654 566 SQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLL 643 (723)
Q Consensus 566 ~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlL 643 (723)
||++ .+++++.+|.. +.+...... .....+++++..+.++|.+.+.. .+.+|||||||||+|||||+++|+++||
T Consensus 81 FQ~yALyPhmtV~~Nia-f~Lk~~~~~-k~ei~~rV~eva~~L~l~~lL~r-~P~~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 81 FQNYALYPHMTVYENIA-FGLKLRGVP-KAEIDKRVKEVAKLLGLEHLLNR-KPLQLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred eCCccccCCCcHHHHhh-hhhhhCCCc-hHHHHHHHHHHHHHcCChhHHhc-CcccCChhhHHHHHHHHHHhcCCCEEEe
Confidence 9985 46677777643 222221110 11235678899999999987764 4599999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 644 DEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 644 DEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||+++||...+..+...|+++ +.|+|+||||..++..++| ||.||++|+|..+ |++.++.+
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtlad-----ri~Vm~~G~i~Q~-g~p~ely~ 223 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLAD-----RIVVMNDGRIQQV-GTPLELYE 223 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCC-----EEEEEeCCeeeec-CChHHHhh
Confidence 9999999999888777777654 5799999999999999995 9999999999754 77777654
No 76
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-40 Score=319.61 Aligned_cols=216 Identities=24% Similarity=0.419 Sum_probs=172.4
Q ss_pred ceEEEeEEEEeCCee-eeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAARGKE-LLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~~~~-vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|++.+++++|+..+ +++||||+++.|+++||+|||||||||+||+|++++.|..|.+.| .+-+....+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~i--dg~d~~~~p-------- 70 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTI--DGVDTVRDP-------- 70 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEE--eecccccCh--------
Confidence 488999999999876 999999999999999999999999999999999988776655444 332222111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
...++.++.+.. ..+.......++...++..+..+...+.++++.++.+.|++.+ ..++++..||-
T Consensus 71 ------~~vrr~IGVl~~-------e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~-~~~rRv~~~S~ 136 (245)
T COG4555 71 ------SFVRRKIGVLFG-------ERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLE-YLDRRVGEFST 136 (245)
T ss_pred ------HHHhhhcceecC-------CcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHH-HHHHHHhhhch
Confidence 123344443321 1122222233333444556666777788999999999999974 56899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||||||+|||||+++|++|||||||+|||..++..+.+++.++ +++||++||.+.++..+||+|++|++|+++ +.|
T Consensus 137 G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv-~~g 215 (245)
T COG4555 137 GMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVV-LEG 215 (245)
T ss_pred hhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEE-EcC
Confidence 9999999999999999999999999999999999999998865 579999999999999999999999999997 568
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+.+..
T Consensus 216 s~~~l 220 (245)
T COG4555 216 SIEAL 220 (245)
T ss_pred CHHHH
Confidence 87665
No 77
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.7e-39 Score=351.80 Aligned_cols=220 Identities=24% Similarity=0.379 Sum_probs=169.4
Q ss_pred ceEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 165 DITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 165 ~I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
+|+++||+++|++ .++|+||||+|++|+++||+||||||||||+++|+|+..| ..|+|.+.++++......
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~~~~~~--- 75 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLTTLSNS--- 75 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECCcCCHH---
Confidence 4899999999952 4799999999999999999999999999999999998654 567777777766432211
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
+...++..++++.+.... .....+.+++..... ...........++.++|+.+|+.+ ..++++.+
T Consensus 76 -------~l~~~r~~Ig~v~Q~~~l------~~~~tv~eni~~~~~-~~~~~~~~~~~~v~e~l~~vgL~~-~~~~~~~~ 140 (343)
T TIGR02314 76 -------ELTKARRQIGMIFQHFNL------LSSRTVFGNVALPLE-LDNTPKDEIKRKVTELLALVGLGD-KHDSYPSN 140 (343)
T ss_pred -------HHHHHhcCEEEEECCccc------cccCcHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCCch-hhhCChhh
Confidence 111223344444332111 111233333332221 112233455678999999999974 56899999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|+++
T Consensus 141 LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv 220 (343)
T TIGR02314 141 LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELI 220 (343)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999998764 679999999999999999999999999997
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+..++
T Consensus 221 ~-~g~~~~v 228 (343)
T TIGR02314 221 E-QGTVSEI 228 (343)
T ss_pred E-EcCHHHH
Confidence 4 5777665
No 78
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-39 Score=335.06 Aligned_cols=220 Identities=28% Similarity=0.400 Sum_probs=164.1
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+......
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~-------- 70 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISGLSEA-------- 70 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccChh--------
Confidence 5789999999989999999999999999999999999999999999998654 566777766654322110
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
+...++..++++.+.... .....+.+++.................++.++++.+|+.. ..++++.+|||||
T Consensus 71 --~~~~~~~~i~~v~q~~~~------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~ 141 (235)
T cd03261 71 --ELYRLRRRMGMLFQSGAL------FDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRG-AEDLYPAELSGGM 141 (235)
T ss_pred --hHHHHhcceEEEccCccc------CCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCCHHH
Confidence 001112223333221110 0111223333221111011222344567889999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+
T Consensus 142 ~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~-~~g~ 220 (235)
T cd03261 142 KKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIV-AEGT 220 (235)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEE-EecC
Confidence 99999999999999999999999999999999999998764 579999999999999999999999999996 4577
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+++
T Consensus 221 ~~~~ 224 (235)
T cd03261 221 PEEL 224 (235)
T ss_pred HHHH
Confidence 6554
No 79
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.8e-38 Score=389.04 Aligned_cols=185 Identities=23% Similarity=0.331 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHhCCCCccccCCCCCCCChHHHHHHHHHHHHc---cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---Cc
Q 048654 295 AAEAQASKILAGLGFTKEMQGRPTKSFSGGWRMRISLARALF---VQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KK 368 (723)
Q Consensus 295 ~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQRvaLArAL~---~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~ 368 (723)
....++ ++|+.+||.....++++.+|||||+|||+||+||+ .+|+||||||||++||+.++..|.++|+++ +.
T Consensus 785 ~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~ 863 (1809)
T PRK00635 785 SIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGH 863 (1809)
T ss_pred HHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 344556 58899999643257899999999999999999997 699999999999999999999999998764 67
Q ss_pred EEEEEeCCHHHHHhhCCEEEEEe------CCEEEEecCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCchhhhHHH
Q 048654 369 TLVVVSHDRDFLNTVCTEIIHLH------DQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYEKQVKAAKRSGNRVQQEKV 442 (723)
Q Consensus 369 TVIivsHdl~~l~~iad~Ii~L~------~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (723)
|||+|||+++++ .+||+|++|. +|+++ ..|+++++..........+ ...+.
T Consensus 864 TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~iv-~~Gtpeel~~~~s~t~~~l-------~~~l~-------------- 920 (1809)
T PRK00635 864 TVVIIEHNMHVV-KVADYVLELGPEGGNLGGYLL-ASCSPEELIHLHTPTAKAL-------RPYLS-------------- 920 (1809)
T ss_pred EEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEEE-EeCCHHHHHhccCchHHHH-------HHHhh--------------
Confidence 999999999999 7899999996 67886 4577766532100000000 00000
Q ss_pred HHHHHHHHHHHHhhhhccCcccCCCCCCCCCccccccceeeecCCCCCCCCCeEEEEEEEEEcCCCcccceeceEEEEec
Q 048654 443 KDRAKSAAAKEASKNKAKGKVDEDEPLPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFKLSDVDVGIDM 522 (723)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~ 522 (723)
... .. + . + .+.+ ..+ +...++++.+... ..|+||||+|++
T Consensus 921 -------------------~~~---~~---~----~----~-~~~~---~~~-l~~~~i~i~~~~~--~~lk~isl~i~~ 960 (1809)
T PRK00635 921 -------------------SPQ---EL---P----Y----L-PDPS---PKP-PVPADITIKNAYQ--HNLKHIDLSLPR 960 (1809)
T ss_pred -------------------ccc---cc---c----c----c-cccc---ccc-cccceEEEecccc--ccccceeEEecC
Confidence 000 00 0 0 0 0000 011 3445666666432 358999999999
Q ss_pred CcEEEEEcCCCCcHHHHHHHH
Q 048654 523 GTRVAIVGPNGAGKSTLLNLL 543 (723)
Q Consensus 523 Ge~vaIvGpNGsGKSTLlk~L 543 (723)
|++++|+|+||||||||+..+
T Consensus 961 gei~~itG~nGsGKStL~~~~ 981 (1809)
T PRK00635 961 NALTAVTGPSASGKHSLVFDI 981 (1809)
T ss_pred CcEEEEECCCCCChhHHHHHH
Confidence 999999999999999977655
No 80
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-39 Score=345.25 Aligned_cols=216 Identities=29% Similarity=0.446 Sum_probs=171.1
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.++++||++.|+ ++++|+||||+|++|+++||+||||||||||||+|+|+..| .+|+|.+.+.++....
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~-------- 73 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEP-------- 73 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCH--------
Confidence 478899999999 69999999999999999999999999999999999998765 5677777776654321
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
..+++.++++++.... .+... ..+...++..+.........+++.++|+.+||.. ..++++..||+
T Consensus 74 ------~~~~~~igy~~~~~~~------~~~lT-~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~lS~ 139 (293)
T COG1131 74 ------AKVRRRIGYVPQEPSL------YPELT-VRENLEFFARLYGLSKEEAEERIEELLELFGLED-KANKKVRTLSG 139 (293)
T ss_pred ------HHHHhheEEEccCCCC------Ccccc-HHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch-hhCcchhhcCH
Confidence 1233445555332211 11122 2233334444443333455678999999999986 34788999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---C-cEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---K-KTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~-~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||||+||+||+.+|+||||||||+||||.++..+.++|+++ + .|||++||.++++..+||+|++|++|+++.+
T Consensus 140 G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~- 218 (293)
T COG1131 140 GMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAE- 218 (293)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEe-
Confidence 9999999999999999999999999999999999999999865 3 6999999999999999999999999999754
Q ss_pred CChhhH
Q 048654 400 GNFDDF 405 (723)
Q Consensus 400 g~~~~~ 405 (723)
|+.+++
T Consensus 219 g~~~~l 224 (293)
T COG1131 219 GTPEEL 224 (293)
T ss_pred CCHHHH
Confidence 666554
No 81
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=339.74 Aligned_cols=218 Identities=26% Similarity=0.329 Sum_probs=165.1
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCCh-HHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDR-SAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~-~~~~~~~ 243 (723)
+|.++|+++.|+...+++||||+|+.||.++|+||||||||||||+|+|+..| ..|.|.+.++....... .....-+
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~V 79 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKV 79 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcce
Confidence 58999999999999999999999999999999999999999999999998765 55677776663322111 1111111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH-HhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL-QILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
+...+.+.++.. +.+.+++++..... ...+......++.++|+.+.|+ .+.++++.+||
T Consensus 80 GfvFQ~YALF~H-------------------mtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~-~la~ryP~QLS 139 (345)
T COG1118 80 GFVFQHYALFPH-------------------MTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLE-GLADRYPAQLS 139 (345)
T ss_pred eEEEechhhccc-------------------chHHhhhhhcccccccCCChhhHHHHHHHHHHHhccc-chhhcCchhcC
Confidence 111111222222 22333343332211 1123456788999999999997 46789999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLC----RWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~----~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||||||||+.+|++||||||+++||..-+..|...|+ +++.|+|+||||.+++.++||||++|++|+|...
T Consensus 140 GGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqv 219 (345)
T COG1118 140 GGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQV 219 (345)
T ss_pred hHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeee
Confidence 999999999999999999999999999999987766666555 4588999999999999999999999999999654
Q ss_pred cCChhhH
Q 048654 399 RGNFDDF 405 (723)
Q Consensus 399 ~g~~~~~ 405 (723)
|+.+++
T Consensus 220 -g~p~ev 225 (345)
T COG1118 220 -GPPDEV 225 (345)
T ss_pred -CCHHHH
Confidence 666555
No 82
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.3e-39 Score=347.01 Aligned_cols=207 Identities=28% Similarity=0.403 Sum_probs=168.6
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIG 563 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig 563 (723)
.+|+++||++.|++ ..+|++|||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++
T Consensus 3 ~~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~ 80 (303)
T TIGR01288 3 VAIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIG 80 (303)
T ss_pred cEEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEE
Confidence 47999999999975 35899999999999999999999999999999999999999999998763 3589
Q ss_pred EEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
|++|... ..+++.++...+ ...+. .........+..+++.++|.... ++++.+|||||||||+|||||+.+|++|
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~-~~~~~-~~~~~~~~~~~~ll~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~ll 157 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVF-GRYFG-MSTREIEAVIPSLLEFARLESKA-DVRVALLSGGMKRRLTLARALINDPQLL 157 (303)
T ss_pred EEeccccCCcCCcHHHHHHHH-HHHcC-CCHHHHHHHHHHHHHHCCChhHh-cCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999742 223343332211 11111 10001124567789999997544 4677999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++ +.|+++++..
T Consensus 158 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d-----~i~~l~~G~i~-~~g~~~~~~~ 224 (303)
T TIGR01288 158 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCD-----RLCVLESGRKI-AEGRPHALID 224 (303)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC-----EEEEEECCEEE-EEcCHHHHHh
Confidence 999999999999999999999887 4699999999999999995 99999999997 4688877654
No 83
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.3e-39 Score=328.23 Aligned_cols=211 Identities=25% Similarity=0.316 Sum_probs=158.6
Q ss_pred ceEEEeEEEEeCC--eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 165 DITIDNFSVAARG--KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 165 ~I~l~nls~~y~~--~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
+|+++|++++|++ +++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.++.+......
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~----- 73 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLTRLRGR----- 73 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehhhcChh-----
Confidence 3789999999964 5799999999999999999999999999999999998654 466777766554321111
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
....+++.++++.+.... .....+.+++..... ...........++.++++.+|+.. ..++++.+||
T Consensus 74 -----~~~~~~~~i~~~~q~~~~------~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS 140 (216)
T TIGR00960 74 -----EIPFLRRHIGMVFQDHRL------LSDRTVYDNVAFPLR-IIGVPPRDANERVSAALEKVGLEG-KAHALPMQLS 140 (216)
T ss_pred -----HHHHHHHhceEEecCccc------cccccHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCC
Confidence 011123334444322110 011122333322111 111222344567899999999974 4578999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
|||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999999999875 57999999999999999999999999974
No 84
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.3e-39 Score=344.96 Aligned_cols=216 Identities=26% Similarity=0.362 Sum_probs=167.9
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||+++|+++.+|+||||+|++|+++||+||||||||||+++|+|+..| ..|+|.+.+.++.....
T Consensus 7 ~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~~~~~~-------- 76 (306)
T PRK13537 7 PIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPVPSRAR-------- 76 (306)
T ss_pred eEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEecccchH--------
Confidence 69999999999999999999999999999999999999999999999998754 55677766665432111
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
..+..++++.+.... .....+.+++.. +..+......+...++.++++.+++.. ..++++.+||||
T Consensus 77 ------~~~~~ig~v~q~~~~------~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G 142 (306)
T PRK13537 77 ------HARQRVGVVPQFDNL------DPDFTVRENLLV-FGRYFGLSAAAARALVPPLLEFAKLEN-KADAKVGELSGG 142 (306)
T ss_pred ------HHHhcEEEEeccCcC------CCCCcHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHcCCch-HhcCchhhCCHH
Confidence 122334444332111 111223333322 222222233344567889999999974 457999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+||+||+.+|+||||||||+|||+.++.+|+++|+++ +.|||++||+++++..+||+|++|++|+++ +.|+
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~-~~g~ 221 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKI-AEGA 221 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECC
Confidence 999999999999999999999999999999999999999875 579999999999999999999999999996 4577
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+++
T Consensus 222 ~~~l 225 (306)
T PRK13537 222 PHAL 225 (306)
T ss_pred HHHH
Confidence 6655
No 85
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3e-39 Score=326.85 Aligned_cols=194 Identities=28% Similarity=0.455 Sum_probs=157.7
Q ss_pred EEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce--------eEEEEccc
Q 048654 497 QLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL--------RIGRYSQH 568 (723)
Q Consensus 497 ~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~--------~ig~~~q~ 568 (723)
+++|+++.|++. ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++.. .++|++|.
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~ 79 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQD 79 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecC
Confidence 367999999752 358999999999999999999999999999999999999999999987742 58999997
Q ss_pred cccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCC
Q 048654 569 FVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTN 648 (723)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~ 648 (723)
....+. ..+..+.+...... .+ .....+.++++.+||.... ++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 80 ~~~~~~-~~tv~e~l~~~~~~-~~-~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~ 155 (205)
T cd03226 80 VDYQLF-TDSVREELLLGLKE-LD-AGNEQAETVLKDLDLYALK-ERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTS 155 (205)
T ss_pred hhhhhh-hccHHHHHhhhhhh-cC-ccHHHHHHHHHHcCCchhc-CCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCc
Confidence 421111 11222222111111 11 1235678899999998654 46779999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEE
Q 048654 649 HLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVS 700 (723)
Q Consensus 649 ~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~ 700 (723)
|||+.++..+.++|+++ +.|||+||||++++..+|| ++++|++|+++
T Consensus 156 ~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~G~iv 205 (205)
T cd03226 156 GLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCD-----RVLLLANGAIV 205 (205)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEC
Confidence 99999999999999887 3689999999999999995 99999999874
No 86
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-39 Score=331.40 Aligned_cols=202 Identities=27% Similarity=0.389 Sum_probs=162.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIGRY 565 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig~~ 565 (723)
|+++|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 i~~~~~~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 78 (220)
T cd03265 1 IEVENLVKKYGDF--EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIV 78 (220)
T ss_pred CEEEEEEEEECCE--EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEe
Confidence 4789999999753 5899999999999999999999999999999999999999999988763 248899
Q ss_pred ccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEe
Q 048654 566 SQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLL 643 (723)
Q Consensus 566 ~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlL 643 (723)
+|... ..+++.++... ....+.. ........+.++++.|+|.... ++++.+|||||||||+|||||+.+|++|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~-~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qr~~la~al~~~p~llll 155 (220)
T cd03265 79 FQDLSVDDELTGWENLYI-HARLYGV-PGAERRERIDELLDFVGLLEAA-DRLVKTYSGGMRRRLEIARSLVHRPEVLFL 155 (220)
T ss_pred cCCccccccCcHHHHHHH-HHHHcCC-CHHHHHHHHHHHHHHcCCHHHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 98742 22233333211 1111111 0001234678899999997543 467799999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 644 DEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 644 DEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||||++||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++. .|++++
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~ 218 (220)
T cd03265 156 DEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCD-----RVAIIDHGRIIA-EGTPEE 218 (220)
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCEEEE-eCChHH
Confidence 9999999999999999999875 4689999999999999995 999999999974 466654
No 87
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=345.98 Aligned_cols=215 Identities=26% Similarity=0.373 Sum_probs=170.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
..|+++||++.||+..+|+++||+|..||+++|+||||||||||||+|+|+..| .+|+|.+.+..+.......
T Consensus 2 ~~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~--~~G~I~i~g~~vt~l~P~~----- 74 (338)
T COG3839 2 AELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEP--TSGEILIDGRDVTDLPPEK----- 74 (338)
T ss_pred cEEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCChhH-----
Confidence 469999999999987799999999999999999999999999999999998754 5667777777776533221
Q ss_pred HhhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 244 SAHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
+.++++ |+..++ +...+.+++++... ......++.++++.++.+.|++.+ +.+|++.+||
T Consensus 75 ----------R~iamVFQ~yALy-------PhmtV~~Niaf~Lk-~~~~~k~ei~~rV~eva~~L~l~~-lL~r~P~~LS 135 (338)
T COG3839 75 ----------RGIAMVFQNYALY-------PHMTVYENIAFGLK-LRGVPKAEIDKRVKEVAKLLGLEH-LLNRKPLQLS 135 (338)
T ss_pred ----------CCEEEEeCCcccc-------CCCcHHHHhhhhhh-hCCCchHHHHHHHHHHHHHcCChh-HHhcCcccCC
Confidence 112222 222221 12344455444332 233446788899999999999975 5689999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR----WKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~----~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||||||||+++|+++|||||+|+||+..+..+...|++ ++.|+|+||||..++..++|||++|++|+|...
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~ 215 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQV 215 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeec
Confidence 9999999999999999999999999999999887776666654 578999999999999999999999999999765
Q ss_pred cCChhhH
Q 048654 399 RGNFDDF 405 (723)
Q Consensus 399 ~g~~~~~ 405 (723)
|++.++
T Consensus 216 -g~p~el 221 (338)
T COG3839 216 -GTPLEL 221 (338)
T ss_pred -CChHHH
Confidence 665554
No 88
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-39 Score=328.36 Aligned_cols=196 Identities=31% Similarity=0.431 Sum_probs=158.7
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~ 78 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVF 78 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEc
Confidence 468999999975 35899999999999999999999999999999999999999999988763 2489999
Q ss_pred cccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|... ..+++.++.... ..... .........+.++++.++|.... ++++.+|||||||||+|||||+.+|+|||||
T Consensus 79 q~~~~~~~~tv~~~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~la~al~~~p~~lllD 155 (213)
T cd03259 79 QDYALFPHLTVAENIAFG-LKLRG-VPKAEIRARVRELLELVGLEGLL-NRYPHELSGGQQQRVALARALAREPSLLLLD 155 (213)
T ss_pred CchhhccCCcHHHHHHhH-HHHcC-CCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 9742 122333332111 11110 00001234577899999997544 4677999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 645 EPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++.
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d-----~v~~l~~G~i~~ 211 (213)
T cd03259 156 EPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALAD-----RIAVMNEGRIVQ 211 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcC-----EEEEEECCEEEe
Confidence 999999999999999999875 4589999999999999995 999999999964
No 89
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1e-39 Score=313.23 Aligned_cols=213 Identities=26% Similarity=0.339 Sum_probs=171.1
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++||++.|+ +.++|+||||+|++||++.|+||||||||||||+|.+... |..|.|.+.++++.....
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~------- 71 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKG------- 71 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccc-------
Confidence 489999999996 4569999999999999999999999999999999998765 556777777777654322
Q ss_pred HhhHHHHHHHHHHHhhhc-CcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQN-STSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
.+...+++.++.+.+ ..+. ....+.++++..+.. ......+...++.++|+.+||.+ ..+..+.+||
T Consensus 72 ---~~iP~LRR~IGvVFQD~rLL-------~~~tvyeNVA~pL~v-~G~~~~~i~~rV~~~L~~VgL~~-k~~~lP~~LS 139 (223)
T COG2884 72 ---REIPFLRRQIGVVFQDFRLL-------PDRTVYENVALPLRV-IGKPPREIRRRVSEVLDLVGLKH-KARALPSQLS 139 (223)
T ss_pred ---cccchhhheeeeEeeecccc-------ccchHhhhhhhhhhc-cCCCHHHHHHHHHHHHHHhccch-hhhcCccccC
Confidence 134456777776533 2221 122344444443322 22345678899999999999975 4568899999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||+||||++.+|+|||.||||.+|||.....|++++.++ |.||||.|||.+.+..+--|++.|++|+++.+
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d 218 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRD 218 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEec
Confidence 99999999999999999999999999999999988888877654 78999999999999999999999999999765
No 90
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-39 Score=351.55 Aligned_cols=206 Identities=26% Similarity=0.353 Sum_probs=169.8
Q ss_pred eEEEEEEEEEc-CCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEE
Q 048654 495 LLQLIEVSFSY-PNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGR 564 (723)
Q Consensus 495 ~l~~~~ls~~y-~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~ 564 (723)
+|+++||++.| ++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|
T Consensus 3 ~l~i~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDGK--TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCCC--CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 68999999999 54 35899999999999999999999999999999999999999999998764 35999
Q ss_pred Ecccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 565 YSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 565 ~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
++|++ +..+++.++.. +.+.... .........+.++++.+||.+.. ++++.+|||||||||+|||||+.+|+|||
T Consensus 81 v~Q~~~lfp~~tv~eNi~-~~~~~~~-~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGq~QRvalARAL~~~P~llL 157 (356)
T PRK11650 81 VFQNYALYPHMSVRENMA-YGLKIRG-MPKAEIEERVAEAARILELEPLL-DRKPRELSGGQRQRVAMGRAIVREPAVFL 157 (356)
T ss_pred EeCCccccCCCCHHHHHH-hHHhhcC-CCHHHHHHHHHHHHHHcCChhHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99974 33455555532 2222111 00011235678899999997654 46779999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||++||+.++..+.+.|+++ +.|||+||||++++..+|| +|++|++|+|+. .|+++++..
T Consensus 158 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D-----~i~vl~~G~i~~-~g~~~~~~~ 224 (356)
T PRK11650 158 FDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLAD-----RVVVMNGGVAEQ-IGTPVEVYE 224 (356)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCEEEE-ECCHHHHHh
Confidence 99999999999999999888765 4689999999999999995 999999999975 588887644
No 91
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=343.96 Aligned_cols=208 Identities=25% Similarity=0.359 Sum_probs=166.1
Q ss_pred eEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 495 LLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
+|+++||++.|++.. ..+|+||||+|.+||+++|+||||||||||+++|+|+++|++|+|++++.
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 489999999997532 24899999999999999999999999999999999999999999987531
Q ss_pred -----------------------eeEEEEccccccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCC
Q 048654 560 -----------------------LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNH 613 (723)
Q Consensus 560 -----------------------~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~ 613 (723)
..+||++|+....+. ..++...+. +.....+.. ....+.++++.+||.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~e~i~-~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~ 159 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLF-EQTIEKDII-FGPVSMGVSKEEAKKRAAKYIELVGLDESYL 159 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccc-cccHHHHHH-hhHHHcCCCHHHHHHHHHHHHHHcCCChhhh
Confidence 247999996422221 123222221 111111111 2345788999999964334
Q ss_pred cCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcE
Q 048654 614 LTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSE 690 (723)
Q Consensus 614 ~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~dr 690 (723)
.+++.+|||||||||+|||+|+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+|| |
T Consensus 160 ~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ad-----r 234 (305)
T PRK13651 160 QRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTK-----R 234 (305)
T ss_pred hCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCC-----E
Confidence 5678999999999999999999999999999999999999999999999876 4699999999999999995 9
Q ss_pred EEEEECCeEEecCCCHHHHH
Q 048654 691 IWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 691 v~vl~~G~i~~~~g~~~~~~ 710 (723)
|++|++|+|+ ..|+++++.
T Consensus 235 v~vl~~G~i~-~~g~~~~~~ 253 (305)
T PRK13651 235 TIFFKDGKII-KDGDTYDIL 253 (305)
T ss_pred EEEEECCEEE-EECCHHHHh
Confidence 9999999997 467887754
No 92
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.2e-39 Score=347.30 Aligned_cols=213 Identities=23% Similarity=0.344 Sum_probs=169.2
Q ss_pred CCCeEEEEEEEEEcCCC-----------cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-
Q 048654 492 TPPLLQLIEVSFSYPNR-----------EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~-----------~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~- 559 (723)
..++|+++||++.|+.. ...+|+||||+|.+||+++|+|+||||||||+++|+|+++|++|+|++++.
T Consensus 5 ~~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~ 84 (331)
T PRK15079 5 KKVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKD 84 (331)
T ss_pred CCceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEE
Confidence 35799999999999631 235899999999999999999999999999999999999999999988653
Q ss_pred -------------eeEEEEccccc----cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCH
Q 048654 560 -------------LRIGRYSQHFV----DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSG 622 (723)
Q Consensus 560 -------------~~ig~~~q~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSG 622 (723)
..++|++|+.. ..+++.+++...+.............+.+.++|+.+||.....++.+.+|||
T Consensus 85 i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSg 164 (331)
T PRK15079 85 LLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSG 164 (331)
T ss_pred CCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCH
Confidence 25899999852 2233433322211111111110112345778999999954333466799999
Q ss_pred HHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCe
Q 048654 623 GQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGT 698 (723)
Q Consensus 623 GqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~ 698 (723)
||+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||+.++..+|| +|++|.+|+
T Consensus 165 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~d-----ri~vl~~G~ 239 (331)
T PRK15079 165 GQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISD-----RVLVMYLGH 239 (331)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEECCE
Confidence 9999999999999999999999999999999999999998775 4689999999999999995 999999999
Q ss_pred EEecCCCHHHHH
Q 048654 699 VSRFPGTFEEYK 710 (723)
Q Consensus 699 i~~~~g~~~~~~ 710 (723)
|++ .|+.+++.
T Consensus 240 ive-~g~~~~i~ 250 (331)
T PRK15079 240 AVE-LGTYDEVY 250 (331)
T ss_pred EEE-EcCHHHHH
Confidence 985 47776654
No 93
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-39 Score=349.64 Aligned_cols=208 Identities=25% Similarity=0.394 Sum_probs=171.9
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEE
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIG 563 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig 563 (723)
.++|+++||++.|++ ..+|+|+||+|.+||+++|+|||||||||||++|+|+++|++|+|.+++. ..++
T Consensus 4 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 4 KNFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred CcEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 458999999999975 35899999999999999999999999999999999999999999998763 3689
Q ss_pred EEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
|++|++ +..+++.+|... .+.... .......+.+.++++.+||.+.. ++++.+|||||||||+|||||+.+|+||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~-~l~~~~-~~~~~~~~~v~~~l~~~gl~~~~-~r~~~~LSgGq~QRVaLARaL~~~P~lL 158 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGY-GLKMLG-VPKEERKQRVKEALELVDLAGFE-DRYVDQISGGQQQRVALARALILKPKVL 158 (351)
T ss_pred EEeCCcccCCCCCHHHHHHH-HHhHcC-CCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999974 334455555322 122111 00011245688899999998655 4667999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||||++||+.++..+.+.|+++ +.|+|+||||.+++..+|| +|++|++|+|+. .|+++++..
T Consensus 159 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD-----~i~vm~~G~i~~-~g~~~~~~~ 226 (351)
T PRK11432 159 LFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSD-----TVIVMNKGKIMQ-IGSPQELYR 226 (351)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHHh
Confidence 999999999999999999988765 4699999999999999995 999999999985 588887643
No 94
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-39 Score=342.40 Aligned_cols=207 Identities=31% Similarity=0.401 Sum_probs=165.7
Q ss_pred EEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 496 LQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 496 l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
|+++||++.|++.. ..+|+||||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 88999999997421 35899999999999999999999999999999999999999999988763
Q ss_pred --eeEEEEccccccc---cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 560 --LRIGRYSQHFVDL---LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 560 --~~ig~~~q~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral 634 (723)
..++|++|++... .++.++.. +..... ........+.+.++|+.+||.....++++.+|||||||||+|||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~-~~~~~~-~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL 160 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDIC-FGPMNF-GVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVL 160 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHH-HHHHHc-CCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 1489999974211 23333221 111111 0000012245788999999974444567899999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+|| ||++|++|+|+ +.|+++++.
T Consensus 161 ~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~d-----rv~~l~~G~i~-~~g~~~~~~ 234 (290)
T PRK13634 161 AMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYAD-----QIVVMHKGTVF-LQGTPREIF 234 (290)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEE-EECCHHHHh
Confidence 9999999999999999999999999999876 4689999999999999995 99999999997 467877754
No 95
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-40 Score=317.11 Aligned_cols=208 Identities=26% Similarity=0.415 Sum_probs=172.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIGR 564 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig~ 564 (723)
||++.+++++|++. ..+++||||+++.|+++||+|||||||||+|++|++++.|++|.|+.++- .+||.
T Consensus 1 Ml~v~~l~K~y~~~-v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGV 79 (245)
T COG4555 1 MLEVTDLTKSYGSK-VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGV 79 (245)
T ss_pred CeeeeehhhhccCH-HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcce
Confidence 68899999999863 34899999999999999999999999999999999999999999987652 34666
Q ss_pred Eccc--cccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 565 YSQH--FVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 565 ~~q~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
++-. +...++..++.. ++..++.. .......++..+.+.|+|....+ +.+..||-|+||||+|||||+++|.+||
T Consensus 80 l~~e~glY~RlT~rEnl~-~Fa~L~~l-~~~~~kari~~l~k~l~l~~~~~-rRv~~~S~G~kqkV~iARAlvh~P~i~v 156 (245)
T COG4555 80 LFGERGLYARLTARENLK-YFARLNGL-SRKEIKARIAELSKRLQLLEYLD-RRVGEFSTGMKQKVAIARALVHDPSILV 156 (245)
T ss_pred ecCCcChhhhhhHHHHHH-HHHHHhhh-hhhHHHHHHHHHHHHhChHHHHH-HHHhhhchhhHHHHHHHHHHhcCCCeEE
Confidence 6532 334556666633 33333321 11123566788999999987665 6789999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
|||||+|||+.+.+.+.+.|.+.+ .+||++||+++++..+|| +|++|++|+++ +.|+++.+.+.
T Consensus 157 lDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCD-----rvivlh~Gevv-~~gs~~~l~~r 223 (245)
T COG4555 157 LDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCD-----RVIVLHKGEVV-LEGSIEALDAR 223 (245)
T ss_pred EcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhh-----eEEEEecCcEE-EcCCHHHHHHH
Confidence 999999999999999999998874 589999999999999995 99999999997 67998887654
No 96
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-39 Score=348.99 Aligned_cols=207 Identities=30% Similarity=0.437 Sum_probs=167.1
Q ss_pred eEEEEEEEEEcCC--CcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 495 LLQLIEVSFSYPN--REDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~--~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
||+++||+++|++ ....+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 5899999999972 1246899999999999999999999999999999999999999999988752
Q ss_pred -eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 560 -LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 560 -~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
..++|++|++. ..+++.++.. +....+. .........+..+++.+||.... ++++.+|||||||||+|||||+.
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~-~~~~~~~-~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGq~qRv~lAraL~~ 157 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVA-LPLELAG-TPKAEIKARVTELLELVGLSDKA-DRYPAQLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHHHHc
Confidence 25899999753 2233433322 1111111 10001234577899999997544 46779999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 158 ~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d-----~v~~l~~G~i~~-~g~~~~~~ 229 (343)
T PRK11153 158 NPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICD-----RVAVIDAGRLVE-QGTVSEVF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHH
Confidence 99999999999999999999999999876 3589999999999999995 999999999974 57777654
No 97
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5e-39 Score=338.82 Aligned_cols=209 Identities=24% Similarity=0.368 Sum_probs=167.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
.++|+++||++.|++ ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 5 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 5 ANLVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred cceEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 458999999999975 35899999999999999999999999999999999999999999987652
Q ss_pred -eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 560 -LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 560 -~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
..++|++|... ..+++.++.... ...............+..+|+.+||.... ++++.+|||||||||+|||||+.
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrv~laral~~ 160 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYP-LREHTQLPAPLLHSTVMMKLEAVGLRGAA-KLMPSELSGGMARRAALARAIAL 160 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHH-HHHccCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhc
Confidence 24789998742 222333332111 11111110001124567789999997544 46679999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++ +.|+++++.+
T Consensus 161 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d-----~v~~l~~G~i~-~~g~~~~~~~ 233 (269)
T PRK11831 161 EPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIAD-----HAYIVADKKIV-AHGSAQALQA 233 (269)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhC-----EEEEEECCEEE-EeCCHHHHhc
Confidence 99999999999999999999999999876 3589999999999999995 99999999997 4578777653
No 98
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=341.24 Aligned_cols=208 Identities=30% Similarity=0.432 Sum_probs=166.5
Q ss_pred eEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 495 LLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
||+++||++.|+... ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|++++.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 589999999997422 24899999999999999999999999999999999999999999988763
Q ss_pred ---eeEEEEccccccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 ---~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..++|++|+....+. ..+....+. +.....+.. ....+.++|+.+||.....++++..|||||||||+|||+
T Consensus 81 ~~~~~ig~v~q~~~~~l~-~~tv~~~l~-~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~a 158 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLF-EETVLKDVA-FGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGI 158 (288)
T ss_pred HHHhhEEEEecCcchhcc-cchHHHHHH-hHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHH
Confidence 147999997421211 112222221 111101111 234577889999996434456789999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+.+|+||||||||+|||+.++..|.++|.++ +.|||+||||++++..+|| ||++|++|+++ +.|+++++.
T Consensus 159 L~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~d-----ri~~l~~G~i~-~~g~~~~~~ 232 (288)
T PRK13643 159 LAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYAD-----YVYLLEKGHII-SCGTPSDVF 232 (288)
T ss_pred HHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCC-----EEEEEECCEEE-EECCHHHHH
Confidence 99999999999999999999999999999876 3699999999999999995 99999999997 468888764
No 99
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5e-39 Score=363.06 Aligned_cols=211 Identities=36% Similarity=0.616 Sum_probs=176.4
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccc-
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDL- 572 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~- 572 (723)
.+|+++|+++.|+++ .+|+++||+|.+|++|||||+|||||||||++|+|.+.|++|+|......+++|++|+....
T Consensus 2 ~~i~~~~ls~~~g~~--~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 2 SMITLENLSLAYGDR--PLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred ceEEEeeeEEeeCCc--eeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 479999999999764 58999999999999999999999999999999999999999999999888999999975321
Q ss_pred -cCccccHHHH------HH----hh------------------CCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHH
Q 048654 573 -LTMEETPVSY------LL----RL------------------HPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGG 623 (723)
Q Consensus 573 -~~~~~~~~~~------~~----~~------------------~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGG 623 (723)
.++.+.++.. +. .. +....+...+.++..+|..+|+... .+++.+||||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LSGG 157 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLSGG 157 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcCHH
Confidence 1111111100 00 00 0001112234567788999999865 5789999999
Q ss_pred HHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecC
Q 048654 624 QKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFP 703 (723)
Q Consensus 624 qkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~ 703 (723)
||.||+||++|+.+|+||||||||||||..++.+|.+.|.++.+|||+||||.+|+..+|+ +|+.++.|++..|.
T Consensus 158 ~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t-----~I~~ld~g~l~~y~ 232 (530)
T COG0488 158 WRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVAT-----HILELDRGKLTPYK 232 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhh-----heEEecCCceeEec
Confidence 9999999999999999999999999999999999999999999999999999999999994 99999999999999
Q ss_pred CCHHHHHHHH
Q 048654 704 GTFEEYKEDL 713 (723)
Q Consensus 704 g~~~~~~~~~ 713 (723)
|+++.|.+.-
T Consensus 233 Gny~~~~~~r 242 (530)
T COG0488 233 GNYSSYLEQK 242 (530)
T ss_pred CCHHHHHHHH
Confidence 9999986543
No 100
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-39 Score=340.43 Aligned_cols=209 Identities=27% Similarity=0.375 Sum_probs=166.0
Q ss_pred eEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 495 LLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
+|+++||++.|++.. ..+|+||||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 489999999997421 35899999999999999999999999999999999999999999987652
Q ss_pred -eeEEEEccccccc---cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC-CCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 560 -LRIGRYSQHFVDL---LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS-HNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 560 -~~ig~~~q~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~~~~~~i~~LSGGqkqRv~lAral 634 (723)
..+||++|.+... .++.++.. +..... ........+.+.++++.+||.. ...++++.+|||||||||+|||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~-~~~~~~-~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL 159 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIA-FGPINL-GLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVV 159 (287)
T ss_pred hhceEEEecCchhccccccHHHHHH-hHHHHC-CCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHH
Confidence 2489999975211 22322221 111111 1100012245788999999961 234567899999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| ||++|++|+++. .|+++++.
T Consensus 160 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~d-----rv~~l~~G~i~~-~g~~~~~~ 233 (287)
T PRK13637 160 AMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLAD-----RIIVMNKGKCEL-QGTPREVF 233 (287)
T ss_pred HcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-ECCHHHHH
Confidence 9999999999999999999999999999876 3589999999999999995 999999999974 58887764
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 3
No 101
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.1e-39 Score=349.46 Aligned_cols=207 Identities=28% Similarity=0.425 Sum_probs=171.7
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGR 564 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~ 564 (723)
++|+++||++.|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.++++ ..++|
T Consensus 3 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 3 PYLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred cEEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 47999999999985 34899999999999999999999999999999999999999999998763 35899
Q ss_pred Ecccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 565 YSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 565 ~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
++|++ ++.+++.+|.. +.+.... .........+.++++.++|.+... +++.+|||||||||+|||||+.+|++||
T Consensus 81 v~Q~~~lfp~~tv~eNi~-~~~~~~~-~~~~~~~~~~~~~l~~l~L~~~~~-~~~~~LSgGq~QRvaLARaL~~~P~llL 157 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIA-YGLKNRG-MGRAEVAERVAELLDLVGLPGSER-KYPGQLSGGQQQRVALARALATSPGLLL 157 (353)
T ss_pred EeCCcccCCCCcHHHHHH-HHHHhcC-CCHHHHHHHHHHHHHHcCCCchhh-CChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99974 34456655532 2222111 000112456889999999986554 6679999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||++||+.++..+.+.|+++ +.|||+||||++++..+|| +|++|++|+|+. .|+++++.+
T Consensus 158 LDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d-----~i~vl~~G~i~~-~g~~~~~~~ 224 (353)
T TIGR03265 158 LDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMAD-----RIVVMNHGVIEQ-VGTPQEIYR 224 (353)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHHh
Confidence 99999999999999999988765 4699999999999999995 999999999975 588877654
No 102
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=308.04 Aligned_cols=232 Identities=24% Similarity=0.331 Sum_probs=179.2
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
..|+++|+.++||...+|++|||+-..|+++.|||.|||||||+||||+=+. .|..|.|...++++.......-....
T Consensus 5 ~~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE--~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 5 NALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLE--KPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred cceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhc--CCCCceEEECCeEEEeeeCCCCCeee
Confidence 3589999999999999999999999999999999999999999999999554 55666776666665311000000001
Q ss_pred HhhHHHHHHHHHHHhhhc-CcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQN-STSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
....+...++..++++.+ ..+ +....+.+++.+..-..-.....++.+++..+|.++|+.+ ..+.++..||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNL-------WsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~e-k~~~YP~~LS 154 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNL-------WSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAE-KADAYPAHLS 154 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcch-------hHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchh-hhhcCccccC
Confidence 112345566767766533 222 2233444554443333334456777889999999999975 4579999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
|||+||++|||||+++|+++|+||||++|||+-+..++..++++ ++|.++|||.+.|+.+++.+|++|++|.|. ..
T Consensus 155 GGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iE-E~ 233 (256)
T COG4598 155 GGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIE-EE 233 (256)
T ss_pred chHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceec-cc
Confidence 99999999999999999999999999999999988887777654 789999999999999999999999999985 56
Q ss_pred CChhhHH
Q 048654 400 GNFDDFE 406 (723)
Q Consensus 400 g~~~~~~ 406 (723)
|++++..
T Consensus 234 G~P~qvf 240 (256)
T COG4598 234 GPPEQVF 240 (256)
T ss_pred CChHHHh
Confidence 8887664
No 103
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1e-38 Score=346.01 Aligned_cols=217 Identities=24% Similarity=0.348 Sum_probs=167.4
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.+|+++||+++|+++.+|+||||+|++|+++||+|||||||||||++|+|+..| ..|+|.+.+..+.....
T Consensus 40 ~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~~~~~~------- 110 (340)
T PRK13536 40 VAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPVPARAR------- 110 (340)
T ss_pred eeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEECCcchH-------
Confidence 469999999999999999999999999999999999999999999999998754 56677777765532110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
..+..++++.+.... .....+.+.+.. +..+..........++.++++.+|+.. ..++++.+|||
T Consensus 111 -------~~~~~ig~v~q~~~~------~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~ll~~~~L~~-~~~~~~~~LS~ 175 (340)
T PRK13536 111 -------LARARIGVVPQFDNL------DLEFTVRENLLV-FGRYFGMSTREIEAVIPSLLEFARLES-KADARVSDLSG 175 (340)
T ss_pred -------HHhccEEEEeCCccC------CCCCcHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHcCCch-hhCCChhhCCH
Confidence 112233333221111 011122333221 111212222334567788999999974 45799999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||||||+||+||+.+|+||||||||+|||+.++.+|+++|+++ +.|||++||+++++..+||+|++|++|+++ +.|
T Consensus 176 G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~-~~g 254 (340)
T PRK13536 176 GMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKI-AEG 254 (340)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEc
Confidence 9999999999999999999999999999999999999999875 679999999999999999999999999997 457
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+.+++
T Consensus 255 ~~~~l 259 (340)
T PRK13536 255 RPHAL 259 (340)
T ss_pred CHHHH
Confidence 76655
No 104
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.2e-38 Score=330.58 Aligned_cols=210 Identities=29% Similarity=0.443 Sum_probs=165.5
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~ 560 (723)
||+++||++.|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 1 MLEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred CeEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 47899999999722 35899999999999999999999999999999999999999999988652 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhh---C---CCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHH
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRL---H---PDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAr 632 (723)
.++|++|... ..+++.++........ . ...........+.++++.+|+.... ++++.+|||||||||+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~ 158 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-YQRADQLSGGQQQRVAIAR 158 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHHHH
Confidence 3789998742 1223332221000000 0 0000011234577899999997544 4677999999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++.++|| +|++|++|+++ ..|++++
T Consensus 159 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d-----~v~~l~~G~i~-~~~~~~~ 232 (243)
T TIGR02315 159 ALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYAD-----RIVGLKAGEIV-FDGAPSE 232 (243)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcC-----eEEEEECCEEE-ecCCHHH
Confidence 999999999999999999999999999999876 3589999999999999995 99999999997 4688877
Q ss_pred HHHH
Q 048654 709 YKED 712 (723)
Q Consensus 709 ~~~~ 712 (723)
+.+.
T Consensus 233 ~~~~ 236 (243)
T TIGR02315 233 LDDE 236 (243)
T ss_pred hChH
Confidence 6443
No 105
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=342.85 Aligned_cols=211 Identities=24% Similarity=0.338 Sum_probs=167.3
Q ss_pred CCCeEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------
Q 048654 492 TPPLLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------- 559 (723)
.+++|+++|++|.|++.. ..+|+||||+|.+|++++|+|+||||||||+++|+|+++|++|+|++++.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 457999999999997421 35899999999999999999999999999999999999999999987641
Q ss_pred ------------------eeEEEEccccccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCC
Q 048654 560 ------------------LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIA 618 (723)
Q Consensus 560 ------------------~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~ 618 (723)
..++|++|.....+. ..+....+. +.....+.. ....+.++++.+||......+++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~eni~-~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~ 175 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF-KDTIEKDIM-FGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPF 175 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccc-cchHHHHHH-hhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcc
Confidence 137899987421111 123222221 111000111 234577899999996333346678
Q ss_pred CCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEE
Q 048654 619 KLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVE 695 (723)
Q Consensus 619 ~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~ 695 (723)
+|||||||||+|||||+.+|+||||||||+|||+.+...+.++|.++ +.|||+||||++++..+|| +|++|+
T Consensus 176 ~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~ad-----ri~vl~ 250 (320)
T PRK13631 176 GLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVAD-----EVIVMD 250 (320)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCC-----EEEEEE
Confidence 99999999999999999999999999999999999999999999876 3699999999999999995 999999
Q ss_pred CCeEEecCCCHHHHH
Q 048654 696 NGTVSRFPGTFEEYK 710 (723)
Q Consensus 696 ~G~i~~~~g~~~~~~ 710 (723)
+|+|+. .|+++++.
T Consensus 251 ~G~i~~-~g~~~~~~ 264 (320)
T PRK13631 251 KGKILK-TGTPYEIF 264 (320)
T ss_pred CCEEEE-eCCHHHHh
Confidence 999974 58887653
No 106
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.5e-39 Score=353.85 Aligned_cols=207 Identities=28% Similarity=0.446 Sum_probs=168.9
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
++|+++||+++|++ ..+|+++||+|.+||+++|+||||||||||||+|+|+++|++|+|++++. .++
T Consensus 2 ~~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 2 PMIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred ceEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 47999999999985 35899999999999999999999999999999999999999999998763 248
Q ss_pred EEEcccccc--ccCccccHHHHHHhhCC-CCC--CCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 563 GRYSQHFVD--LLTMEETPVSYLLRLHP-DQE--GLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 563 g~~~q~~~~--~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
+|++|.... .+++.++... ....+. ... .....+.+.++|+.+|+.... ++++.+|||||||||+|||||+++
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~-~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-~~~~~~LSgGerQRv~IArAL~~~ 157 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEM-GRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-DRPVTSLSGGERQRVLLARALAQA 157 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHh-ccchhcccccCCCHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHHcC
Confidence 999987432 2333332211 000000 011 111345688899999997544 578899999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+||||||||+|||+.++..++++|+++. .|||++|||++++.++|| |+++|++|+++. .|+++++.
T Consensus 158 P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~ad-----rii~l~~G~iv~-~G~~~ev~ 227 (402)
T PRK09536 158 TPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCD-----ELVLLADGRVRA-AGPPADVL 227 (402)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC-----EEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999999998873 599999999999999995 999999999974 68888754
No 107
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.2e-38 Score=335.57 Aligned_cols=213 Identities=25% Similarity=0.355 Sum_probs=166.8
Q ss_pred CCeEEEEEEEEEcCCC-------cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------
Q 048654 493 PPLLQLIEVSFSYPNR-------EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------ 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~-------~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------ 559 (723)
+++|+++||+++|++. ..++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 2 ~~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~ 81 (267)
T PRK15112 2 ETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGD 81 (267)
T ss_pred cceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCc
Confidence 4689999999999631 235899999999999999999999999999999999999999999988652
Q ss_pred -----eeEEEEccccccccCccccHHHHH---HhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDLLTMEETPVSYL---LRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 -----~~ig~~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|.....+....+....+ .............+.+.++++.+||......+++.+|||||||||+||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 161 (267)
T PRK15112 82 YSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLA 161 (267)
T ss_pred hhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHH
Confidence 248899987432121111211111 111111101112345778999999953333456789999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++ ..|+++
T Consensus 162 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d-----~i~~l~~G~i~-~~~~~~ 235 (267)
T PRK15112 162 RALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISD-----QVLVMHQGEVV-ERGSTA 235 (267)
T ss_pred HHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcC-----EEEEEECCEEE-ecCCHH
Confidence 9999999999999999999999999999999875 4589999999999999995 99999999997 467777
Q ss_pred HHHH
Q 048654 708 EYKE 711 (723)
Q Consensus 708 ~~~~ 711 (723)
++..
T Consensus 236 ~~~~ 239 (267)
T PRK15112 236 DVLA 239 (267)
T ss_pred HHhc
Confidence 6643
No 108
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=326.21 Aligned_cols=210 Identities=32% Similarity=0.447 Sum_probs=175.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------e
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------L 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~ 560 (723)
.+++++++|+++||+ ..+++||||+|.+||+++||||||||||||+|+|+|+++|++|+|.+.++ .
T Consensus 2 ~~lL~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~ 79 (250)
T COG0411 2 TPLLEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARL 79 (250)
T ss_pred CceeeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhc
Confidence 368999999999986 45899999999999999999999999999999999999999999998774 2
Q ss_pred eEEEEcccc--ccccCccccHHHHHHh-------hC-CCC--CCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHH
Q 048654 561 RIGRYSQHF--VDLLTMEETPVSYLLR-------LH-PDQ--EGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 561 ~ig~~~q~~--~~~~~~~~~~~~~~~~-------~~-~~~--~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv 628 (723)
.+++.||+. +..+++.+|+...... ++ +.. ......+++.++|+.+||.+.. +.+.++||+|||+||
T Consensus 80 Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-~~~A~~LsyG~qR~L 158 (250)
T COG0411 80 GIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-DRPAGNLSYGQQRRL 158 (250)
T ss_pred cceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-cchhhcCChhHhHHH
Confidence 467788863 4556666665432110 00 000 0011245688899999998655 578899999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCC
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPG 704 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g 704 (723)
.|||||+.+|+|||||||.+||.+.....+.+.|+++. .||++|.||++++..+|| ||+||+.|+++ .+|
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~d-----ri~Vl~~G~~I-AeG 232 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLAD-----RIVVLNYGEVI-AEG 232 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhcc-----EEEeccCCcCc-ccC
Confidence 99999999999999999999999999999999998874 589999999999999995 99999999997 689
Q ss_pred CHHHHHH
Q 048654 705 TFEEYKE 711 (723)
Q Consensus 705 ~~~~~~~ 711 (723)
+|+++.+
T Consensus 233 ~P~eV~~ 239 (250)
T COG0411 233 TPEEVRN 239 (250)
T ss_pred CHHHHhc
Confidence 9998764
No 109
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-39 Score=339.56 Aligned_cols=208 Identities=24% Similarity=0.328 Sum_probs=166.0
Q ss_pred eEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 495 LLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
+|+++||++.|++.. ..+|+||||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 588999999997421 35899999999999999999999999999999999999999999988763
Q ss_pred ---eeEEEEcccccc---ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFVD---LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 ---~~ig~~~q~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..++|++|.+.. ..++.++.. +....+. .........+.++++.+||......+++.+|||||||||+||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~-~~~~~~~-~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~lara 159 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVE-FGPKNFG-FSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGV 159 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHH
Confidence 147899987421 123333321 1111111 10001234578899999996333356789999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 160 l~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d-----~v~~l~~G~i~~-~g~~~~~~ 233 (287)
T PRK13641 160 MAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYAD-----DVLVLEHGKLIK-HASPKEIF 233 (287)
T ss_pred HHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999998873 589999999999999995 999999999974 57877654
No 110
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-40 Score=328.75 Aligned_cols=227 Identities=25% Similarity=0.369 Sum_probs=172.2
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH-H
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA-V 242 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~-~ 242 (723)
+++++++++++||+-.+++||||++++|++++||||||||||||+++|+|++.| +.|+|.+.++++.+.....+.. .
T Consensus 3 ~lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 3 PLLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred ceeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhcc
Confidence 458899999999999999999999999999999999999999999999998765 5678888888877654332211 0
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHH-HHHHHHHh--c--CchHHHHHHHHHHHhCCCCccccCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLA-ELYEKLQI--L--GSDAAEAQASKILAGLGFTKEMQGRP 317 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~--~--~~~~~~~~~~~~L~~lgl~~~~~~~~ 317 (723)
+....+...++..++.++|. .+..... .+...+.. . ...+..+++.++|+.+||.+ .++++
T Consensus 81 i~RTFQ~~rlF~~lTVlENv-------------~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~-~a~~~ 146 (250)
T COG0411 81 IARTFQITRLFPGLTVLENV-------------AVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGE-LADRP 146 (250)
T ss_pred ceeecccccccCCCcHHHHH-------------HHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCch-hhcch
Confidence 11111111222222222111 1110000 00001110 1 12456788999999999974 56899
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
..+||+|||+|+.|||||+.+|+|||||||.+||.+.....+.++|+++ +.||++|.||++++..+||||+||+.|
T Consensus 147 A~~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G 226 (250)
T COG0411 147 AGNLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYG 226 (250)
T ss_pred hhcCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCC
Confidence 9999999999999999999999999999999999999999998888765 479999999999999999999999999
Q ss_pred EEEEecCChhhHHh
Q 048654 394 KLHFYRGNFDDFES 407 (723)
Q Consensus 394 ~i~~~~g~~~~~~~ 407 (723)
+++ ..|++++...
T Consensus 227 ~~I-AeG~P~eV~~ 239 (250)
T COG0411 227 EVI-AEGTPEEVRN 239 (250)
T ss_pred cCc-ccCCHHHHhc
Confidence 986 4699887754
No 111
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=343.56 Aligned_cols=211 Identities=27% Similarity=0.368 Sum_probs=168.2
Q ss_pred CCeEEEEEEEEEcCCC--------cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----
Q 048654 493 PPLLQLIEVSFSYPNR--------EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~--------~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----- 559 (723)
+++|+++||++.|+.. ...+|+||||+|.+||+++|+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~ 82 (327)
T PRK11308 3 QPLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKA 82 (327)
T ss_pred CceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcC
Confidence 4689999999999631 235899999999999999999999999999999999999999999988762
Q ss_pred ---------eeEEEEcccccccc----CccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHH
Q 048654 560 ---------LRIGRYSQHFVDLL----TMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKA 626 (723)
Q Consensus 560 ---------~~ig~~~q~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkq 626 (723)
..++|++|+....+ ++.++.. .....+...........+.++|+.+||.....++++.+|||||+|
T Consensus 83 ~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~Q 161 (327)
T PRK11308 83 DPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILE-EPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQ 161 (327)
T ss_pred CHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHH-HHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHH
Confidence 24899999853222 2222211 111111111111123567899999999643334667999999999
Q ss_pred HHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEec
Q 048654 627 RVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRF 702 (723)
Q Consensus 627 Rv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~ 702 (723)
||+|||||+.+|+||||||||++||+.++..++++|.++ +.|||+||||+.++.++|| +|++|++|+|++
T Consensus 162 Rv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~ad-----rv~vm~~G~ive- 235 (327)
T PRK11308 162 RIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIAD-----EVMVMYLGRCVE- 235 (327)
T ss_pred HHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-
Confidence 999999999999999999999999999999999999775 4699999999999999995 999999999986
Q ss_pred CCCHHHHH
Q 048654 703 PGTFEEYK 710 (723)
Q Consensus 703 ~g~~~~~~ 710 (723)
.|+.+++.
T Consensus 236 ~g~~~~~~ 243 (327)
T PRK11308 236 KGTKEQIF 243 (327)
T ss_pred ECCHHHHh
Confidence 47766654
No 112
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.2e-38 Score=327.36 Aligned_cols=201 Identities=29% Similarity=0.417 Sum_probs=158.0
Q ss_pred eEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 495 LLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
+|+++||++.|++.. ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 478999999997531 25899999999999999999999999999999999999999999987652
Q ss_pred -eeEEEEccccc----cccCccccHHHHHHhhCCCCCCCcHHHH-HHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 -LRIGRYSQHFV----DLLTMEETPVSYLLRLHPDQEGLSKQEA-VRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 -~~ig~~~q~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..++|++|... ..+++.++... ....+........... +.++++.+++......+++.+|||||||||+||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lara 159 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAE-PLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARA 159 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHH-HHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHH
Confidence 24889998742 12333333211 1111111000001122 24788999995333346779999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++.
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~G~i~~ 226 (228)
T cd03257 160 LALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIAD-----RVAVMYAGKIVE 226 (228)
T ss_pred HhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcC-----eEEEEeCCEEEe
Confidence 99999999999999999999999999999876 4689999999999999995 999999999864
No 113
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-39 Score=337.36 Aligned_cols=206 Identities=27% Similarity=0.380 Sum_probs=165.8
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
++|+++|+++.|++. ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 3 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 3 NIIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred ceEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 479999999999632 35899999999999999999999999999999999999999999998763 248
Q ss_pred EEEcccccc---ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 563 GRYSQHFVD---LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 563 g~~~q~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
+|++|.+.. ..++.++.. +..... ..........+..+++.+||.... ++++.+|||||||||+|||||+.+|+
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~-~~~~~~-~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LSgG~~qrv~laraL~~~p~ 158 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVA-FGPVNM-GLDKDEVERRVEEALKAVRMWDFR-DKPPYHLSYGQKKRVAIAGVLAMDPD 158 (274)
T ss_pred EEEecChhhhhccCcHHHHHH-hhHHHc-CCCHHHHHHHHHHHHHHCCCHHHh-cCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 999997421 123322221 101110 110001234578899999997544 46779999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||||||||++||+.++..+.++|+++ +.|||+||||++++.++|| ||++|++|+++. .|+++++
T Consensus 159 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~ 225 (274)
T PRK13647 159 VIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWAD-----QVIVLKEGRVLA-EGDKSLL 225 (274)
T ss_pred EEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-ECCHHHh
Confidence 99999999999999999999999877 3699999999999999995 999999999974 5777654
No 114
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=330.25 Aligned_cols=206 Identities=30% Similarity=0.399 Sum_probs=165.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRY 565 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~ 565 (723)
+|+++||++.|++ ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v 79 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFV 79 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEE
Confidence 4889999999975 35899999999999999999999999999999999999999999988763 248999
Q ss_pred ccccc--cccCccccHHHHHHhhCCCC--CCC-cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 566 SQHFV--DLLTMEETPVSYLLRLHPDQ--EGL-SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 566 ~q~~~--~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|.+. ..+++.++... ........ ... ...+.+..+++.+||.... ++++.+|||||||||+|||||+.+|+|
T Consensus 80 ~q~~~~~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~l 157 (239)
T cd03296 80 FQHYALFRHMTVFDNVAF-GLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-DRYPAQLSGGQRQRVALARALAVEPKV 157 (239)
T ss_pred ecCCcccCCCCHHHHHhh-hhhhccccccCCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 98742 12233333211 11111100 000 1124567889999997544 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 225 (239)
T cd03296 158 LLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVAD-----RVVVMNKGRIEQ-VGTPDEVY 225 (239)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEECCeEEE-ecCHHHHh
Confidence 9999999999999999999999876 3589999999999999995 999999999974 57877664
No 115
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=331.85 Aligned_cols=195 Identities=31% Similarity=0.358 Sum_probs=161.5
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------eeEEEEc
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------LRIGRYS 566 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------~~ig~~~ 566 (723)
.++|+++||++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 10 ~~~l~i~~l~~~~~~~--~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 10 GTPLLLNAVSKRYGER--TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CCcEEEEEEEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 4679999999999753 5899999999999999999999999999999999999999999988663 2589999
Q ss_pred cccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccC
Q 048654 567 QHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEP 646 (723)
Q Consensus 567 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEP 646 (723)
|...- ....++.+.+...... .....+.++++.+||.... ++++.+|||||||||+|||+|+.+|++||||||
T Consensus 88 q~~~l--~~~~tv~enl~~~~~~----~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGqkqrl~laraL~~~p~lllLDEP 160 (257)
T PRK11247 88 QDARL--LPWKKVIDNVGLGLKG----QWRDAALQALAAVGLADRA-NEWPAALSGGQKQRVALARALIHRPGLLLLDEP 160 (257)
T ss_pred cCccC--CCCCcHHHHHHhcccc----hHHHHHHHHHHHcCChhHh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 97421 1112323222111111 1235678899999997654 466799999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 647 TNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 647 T~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+|+.
T Consensus 161 t~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d-----~i~~l~~G~i~~ 214 (257)
T PRK11247 161 LGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMAD-----RVLLIEEGKIGL 214 (257)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEe
Confidence 9999999999999999775 4699999999999999995 999999999974
No 116
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-38 Score=328.73 Aligned_cols=209 Identities=31% Similarity=0.428 Sum_probs=165.1
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------ee
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------LR 561 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~~ 561 (723)
|+++||++.|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4689999999752 35899999999999999999999999999999999999999999987652 24
Q ss_pred EEEEccccc--cccCccccHHHHHHhh---CC---CCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRL---HP---DQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
++|++|... ..+++.++........ +. ........+.+.++++.+++.... .+++.+|||||||||+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~a 158 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-YQRADQLSGGQQQRVAIARA 158 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-CCCcccCCHHHHHHHHHHHH
Confidence 789998642 2233333321100000 00 000011234577899999997543 46779999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+|| +|++|++|+++. .|+++++
T Consensus 159 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d-----~v~~l~~G~i~~-~~~~~~~ 232 (241)
T cd03256 159 LMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYAD-----RIVGLKDGRIVF-DGPPAEL 232 (241)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEe-ecCHHHh
Confidence 99999999999999999999999999999876 3689999999999999995 999999999974 5888776
Q ss_pred HHH
Q 048654 710 KED 712 (723)
Q Consensus 710 ~~~ 712 (723)
.+.
T Consensus 233 ~~~ 235 (241)
T cd03256 233 TDE 235 (241)
T ss_pred hHH
Confidence 543
No 117
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=316.87 Aligned_cols=207 Identities=29% Similarity=0.415 Sum_probs=166.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCc-----ceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTE-----GEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~-----G~I~~~~~-------- 559 (723)
.+.++++||++.|++. .+|++||+.|++++++|||||+|||||||||+|..+..... |+|.+.++
T Consensus 5 ~~~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 5 IPAIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred cceeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 4678999999999864 58999999999999999999999999999999999887664 89987663
Q ss_pred -----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~l 630 (723)
.++|+++|.+.++ +++.+|+ .+..+.+.... ..-.+.++..|....|.+. ..+++...||||||||++|
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNV-ayG~r~~g~~~-~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcI 160 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNV-AYGLRLHGIKD-KELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCI 160 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHH-HHhHHhhccch-HHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHH
Confidence 3689999976432 3444553 23333332211 1123557777877777542 2234567899999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||||+.+|+||||||||++|||.+...|.++|.+++ -|||+|||++..+.+++| +++++..|++++| |+-+.
T Consensus 161 ARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD-----~taFf~~G~LvE~-g~T~~ 234 (253)
T COG1117 161 ARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSD-----YTAFFYLGELVEF-GPTDK 234 (253)
T ss_pred HHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhH-----hhhhhcccEEEEE-cCHHh
Confidence 999999999999999999999999999999999986 599999999999999995 8999999999987 44444
Q ss_pred H
Q 048654 709 Y 709 (723)
Q Consensus 709 ~ 709 (723)
+
T Consensus 235 i 235 (253)
T COG1117 235 I 235 (253)
T ss_pred h
Confidence 4
No 118
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=333.15 Aligned_cols=209 Identities=24% Similarity=0.364 Sum_probs=168.2
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
+.+|+++||++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 457999999999975 35899999999999999999999999999999999999999999987652
Q ss_pred -----------eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHH
Q 048654 560 -----------LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKA 626 (723)
Q Consensus 560 -----------~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkq 626 (723)
..++|++|+.. ..+++.++.......... .........+.++++.+|+......+++.+|||||||
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~q 159 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLG-LSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQ 159 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHH
Confidence 24789998742 223333332211111111 1001123457789999999765434667999999999
Q ss_pred HHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecC
Q 048654 627 RVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFP 703 (723)
Q Consensus 627 Rv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~ 703 (723)
||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| ||++|++|+++. .
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~-~ 233 (257)
T PRK10619 160 RVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSS-----HVIFLHQGKIEE-E 233 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEECCEEEE-e
Confidence 999999999999999999999999999999999998876 3689999999999999995 999999999974 5
Q ss_pred CCHHHHH
Q 048654 704 GTFEEYK 710 (723)
Q Consensus 704 g~~~~~~ 710 (723)
|+++++.
T Consensus 234 ~~~~~~~ 240 (257)
T PRK10619 234 GAPEQLF 240 (257)
T ss_pred CCHHHhh
Confidence 7877764
No 119
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1e-38 Score=326.26 Aligned_cols=205 Identities=29% Similarity=0.420 Sum_probs=164.1
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce----------eEEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL----------RIGRY 565 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~----------~ig~~ 565 (723)
|+++||++.|++...++|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 46899999997522358999999999999999999999999999999999999999999887642 47899
Q ss_pred ccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEe
Q 048654 566 SQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLL 643 (723)
Q Consensus 566 ~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlL 643 (723)
+|... ..+++.++.. +....+.. ......+.+.++++.++|.... ++++.+|||||+|||+|||||+.+|++|||
T Consensus 81 ~q~~~~~~~~tv~~~l~-~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llll 157 (220)
T cd03263 81 PQFDALFDELTVREHLR-FYARLKGL-PKSEIKEEVELLLRVLGLTDKA-NKRARTLSGGMKRKLSLAIALIGGPSVLLL 157 (220)
T ss_pred cCcCCccccCCHHHHHH-HHHHHcCC-CHHHHHHHHHHHHHHcCCHHHH-hChhhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 98642 2233333321 11111111 0001234577899999997544 466799999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 644 DEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 644 DEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||||++||+.+.+.+.++|+++. .|||++|||++++..+|| ++++|++|+++. .|+++++
T Consensus 158 DEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~g~i~~-~~~~~~~ 219 (220)
T cd03263 158 DEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCD-----RIAIMSDGKLRC-IGSPQEL 219 (220)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcC-----EEEEEECCEEEe-cCCHHHc
Confidence 99999999999999999998875 589999999999999995 999999999974 5776553
No 120
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=345.37 Aligned_cols=217 Identities=21% Similarity=0.335 Sum_probs=169.0
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
+.+|+++|+++.|+++.+|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+..+......
T Consensus 4 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i~~~~~~----- 76 (351)
T PRK11432 4 KNFVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDVTHRSIQ----- 76 (351)
T ss_pred CcEEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEECCCCCHH-----
Confidence 4479999999999999999999999999999999999999999999999998754 566777777665432110
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
...++++.+.... .....+.+++..... .......+...++.++++.+|+.. +.++++.+||
T Consensus 77 ----------~r~ig~vfQ~~~l------fp~~tv~eNi~~~l~-~~~~~~~~~~~~v~~~l~~~gl~~-~~~r~~~~LS 138 (351)
T PRK11432 77 ----------QRDICMVFQSYAL------FPHMSLGENVGYGLK-MLGVPKEERKQRVKEALELVDLAG-FEDRYVDQIS 138 (351)
T ss_pred ----------HCCEEEEeCCccc------CCCCCHHHHHHHHHh-HcCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCC
Confidence 1122222221100 112233444433221 112334455678999999999974 5689999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||+|||||+.+|+||||||||++||+..+.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++.
T Consensus 139 gGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~- 217 (351)
T PRK11432 139 GGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQ- 217 (351)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-
Confidence 99999999999999999999999999999999999998888754 6799999999999999999999999999975
Q ss_pred cCChhhH
Q 048654 399 RGNFDDF 405 (723)
Q Consensus 399 ~g~~~~~ 405 (723)
.|+++++
T Consensus 218 ~g~~~~~ 224 (351)
T PRK11432 218 IGSPQEL 224 (351)
T ss_pred EcCHHHH
Confidence 4776654
No 121
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-38 Score=326.85 Aligned_cols=200 Identities=29% Similarity=0.395 Sum_probs=160.4
Q ss_pred CCeEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------
Q 048654 493 PPLLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------- 559 (723)
.++|+++||++.|++.. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|++++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 3 KILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred CceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 46899999999997432 35899999999999999999999999999999999999999999998762
Q ss_pred ----eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 ----~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..++|++|... ..+++.++... ...... .......+.+.++++.+||.... .+++.+|||||||||+||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~-~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGK-KKPAEINSRALEMLAAVGLEHRA-NHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHH-HHHhcC-CCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHH
Confidence 24899999742 22333333211 111111 10011234578899999997554 45678999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+| ++++|++|+|+.
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~------~~~~l~~G~i~~ 225 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMS------RQLEMRDGRLTA 225 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhC------EEEEEECCEEEE
Confidence 99999999999999999999999999999875 358999999999998653 899999999974
No 122
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.8e-38 Score=331.13 Aligned_cols=209 Identities=26% Similarity=0.363 Sum_probs=166.3
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce------------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL------------ 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~------------ 560 (723)
.++|+++|+++.|+++ .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 4 ~~~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~ 81 (258)
T PRK11701 4 QPLLSVRGLTKLYGPR--KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEA 81 (258)
T ss_pred CceEEEeeeEEEcCCc--eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHH
Confidence 4589999999999753 58999999999999999999999999999999999999999999876642
Q ss_pred --------eEEEEcccccccc----CccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHH
Q 048654 561 --------RIGRYSQHFVDLL----TMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 561 --------~ig~~~q~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv 628 (723)
.++|++|+....+ ++.++....+......... .....+.++++.|++......+++.+|||||||||
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl 160 (258)
T PRK11701 82 ERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYG-DIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRL 160 (258)
T ss_pred HHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHH-HHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHH
Confidence 3789998753211 2222322111111100000 12345678899999964233467799999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCC
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPG 704 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g 704 (723)
+|||||+.+|+||||||||+|||+.+...+.+.|+++ +.|||+||||++++..+|| +|++|++|+++. .|
T Consensus 161 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d-----~i~~l~~g~i~~-~~ 234 (258)
T PRK11701 161 QIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAH-----RLLVMKQGRVVE-SG 234 (258)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcC-----EEEEEECCEEEE-eC
Confidence 9999999999999999999999999999999998765 4699999999999999995 999999999974 57
Q ss_pred CHHHHH
Q 048654 705 TFEEYK 710 (723)
Q Consensus 705 ~~~~~~ 710 (723)
+++++.
T Consensus 235 ~~~~~~ 240 (258)
T PRK11701 235 LTDQVL 240 (258)
T ss_pred CHHHHh
Confidence 777654
No 123
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=348.93 Aligned_cols=206 Identities=27% Similarity=0.348 Sum_probs=168.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRY 565 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~ 565 (723)
+|+++|+++.|++. .+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|+
T Consensus 3 ~l~i~~l~~~~~~~--~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v 80 (369)
T PRK11000 3 SVTLRNVTKAYGDV--VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMV 80 (369)
T ss_pred EEEEEEEEEEeCCe--EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEE
Confidence 58999999999753 5899999999999999999999999999999999999999999998663 248999
Q ss_pred ccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEe
Q 048654 566 SQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLL 643 (723)
Q Consensus 566 ~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlL 643 (723)
+|.+. ..+++.++.... ..... .........+.++++.+||.... ++++.+|||||||||+|||||+.+|+||||
T Consensus 81 ~Q~~~l~~~~tv~eni~~~-~~~~~-~~~~~~~~~~~~~l~~lgL~~~~-~~~~~~LSgGq~QRvaLAraL~~~P~lLLL 157 (369)
T PRK11000 81 FQSYALYPHLSVAENMSFG-LKLAG-AKKEEINQRVNQVAEVLQLAHLL-DRKPKALSGGQRQRVAIGRTLVAEPSVFLL 157 (369)
T ss_pred eCCcccCCCCCHHHHHHhH-HhhcC-CCHHHHHHHHHHHHHHcCChhhh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99742 334454443211 11111 00001234678899999997544 467799999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 644 DEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 644 DEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||++||+.++..+.+.|+++ +.|||+||||++++..+|| +|++|++|+|+. .|+++++..
T Consensus 158 DEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d-----~i~vl~~G~i~~-~g~~~~i~~ 223 (369)
T PRK11000 158 DEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLAD-----KIVVLDAGRVAQ-VGKPLELYH 223 (369)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999988775 4689999999999999995 999999999975 578877643
No 124
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=338.24 Aligned_cols=209 Identities=29% Similarity=0.413 Sum_probs=165.7
Q ss_pred eEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 495 LLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
.|+++||++.|++.. ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996421 35899999999999999999999999999999999999999999988652
Q ss_pred ---eeEEEEccccccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 ---~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..+||++|++...+. ..++...+. +.....+.. ....+.++|..+||.....++++.+|||||||||+||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~-~~tv~e~i~-~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lara 159 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLF-EDTVEREII-FGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSI 159 (286)
T ss_pred HHHhheEEEecChHhccc-hhhHHHHHH-hhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHH
Confidence 147999997422111 112222221 110001111 234577899999996333446779999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| ||++|++|+|+. .|+++++
T Consensus 160 L~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~d-----ri~~l~~G~i~~-~g~~~~~ 233 (286)
T PRK13646 160 LAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYAD-----EVIVMKEGSIVS-QTSPKEL 233 (286)
T ss_pred HHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCC-----EEEEEECCEEEE-ECCHHHH
Confidence 99999999999999999999999999999875 3699999999999999995 999999999974 5787775
Q ss_pred HH
Q 048654 710 KE 711 (723)
Q Consensus 710 ~~ 711 (723)
..
T Consensus 234 ~~ 235 (286)
T PRK13646 234 FK 235 (286)
T ss_pred Hh
Confidence 43
No 125
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.3e-38 Score=328.92 Aligned_cols=205 Identities=31% Similarity=0.443 Sum_probs=164.2
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRIG 563 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ig 563 (723)
|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 468999999975 35899999999999999999999999999999999999999999987652 2488
Q ss_pred EEccccc--cccCccccHHHHHHhhCCCC---------CCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHH
Q 048654 564 RYSQHFV--DLLTMEETPVSYLLRLHPDQ---------EGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 564 ~~~q~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAr 632 (723)
|++|.+. ..+++.++.... ....... ........+.++++.+|+.... ++++.+|||||||||+|||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVA-AQARTGSGLLLARARREEREARERAEELLERVGLADLA-DRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEecccccccCCCHHHHHHHH-HhhccccccccccccccHHHHHHHHHHHHHHcCccchh-hCChhhCCHHHHHHHHHHH
Confidence 9998742 223343332111 1111000 0001234577899999997544 4678999999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||+.+|++|||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+|+ ..|+++++
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d-----~i~~l~~G~i~-~~~~~~~~ 230 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLAD-----RVTVLDQGRVI-AEGTPDEV 230 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCC-----EEEEEeCCEEE-eecCHHHh
Confidence 9999999999999999999999999999998763 589999999999999995 99999999997 45777765
Q ss_pred H
Q 048654 710 K 710 (723)
Q Consensus 710 ~ 710 (723)
.
T Consensus 231 ~ 231 (236)
T cd03219 231 R 231 (236)
T ss_pred c
Confidence 3
No 126
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=346.39 Aligned_cols=215 Identities=20% Similarity=0.295 Sum_probs=167.2
Q ss_pred ceEEEeEEEEe-CCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAA-RGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y-~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++|++++| +++.+|+|+||+|++|++++|+|||||||||||++|+|+.. |.+|+|.+.+..+......
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~------ 74 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPA------ 74 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHH------
Confidence 58999999999 78899999999999999999999999999999999999865 4567787777765432110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
...++++.+.... .....+.+++..... ...........++.++++.+|+.+ ..++++.+|||
T Consensus 75 ---------~r~ig~v~Q~~~l------fp~~tv~eNi~~~~~-~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LSg 137 (356)
T PRK11650 75 ---------DRDIAMVFQNYAL------YPHMSVRENMAYGLK-IRGMPKAEIEERVAEAARILELEP-LLDRKPRELSG 137 (356)
T ss_pred ---------HCCEEEEeCCccc------cCCCCHHHHHHhHHh-hcCCCHHHHHHHHHHHHHHcCChh-HhhCChhhCCH
Confidence 0122222221110 112233344432221 111233445678899999999974 56899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||||+|||||+.+|+||||||||++||+.++..|.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .
T Consensus 138 Gq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~-~ 216 (356)
T PRK11650 138 GQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQ-I 216 (356)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-E
Confidence 9999999999999999999999999999999999998888754 6799999999999999999999999999975 4
Q ss_pred CChhhH
Q 048654 400 GNFDDF 405 (723)
Q Consensus 400 g~~~~~ 405 (723)
|+++++
T Consensus 217 g~~~~~ 222 (356)
T PRK11650 217 GTPVEV 222 (356)
T ss_pred CCHHHH
Confidence 777665
No 127
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1e-38 Score=325.79 Aligned_cols=195 Identities=35% Similarity=0.459 Sum_probs=155.7
Q ss_pred EEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------
Q 048654 496 LQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------------- 559 (723)
Q Consensus 496 l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------------- 559 (723)
|+++||++.|++.. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999997521 35899999999999999999999999999999999999999999987652
Q ss_pred -eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 560 -LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 560 -~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
..++|++|... ..+++.++... ..... ........+.+.++++.+||.... ++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~-~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~ 157 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVEL-PLLLA-GVPKKERRERAEELLERVGLGDRL-NHYPSELSGGQQQRVAIARALAN 157 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHH-HHhhc-CCCHHHHHHHHHHHHHHcCCchhh-hcChhhcCHHHHHHHHHHHHHcc
Confidence 24889998642 22333333211 11111 110001234578899999997554 46679999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++. +|| +|++|++|++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d-----~v~~l~~G~i 218 (218)
T cd03255 158 DPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YAD-----RIIELRDGKI 218 (218)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhc-----EEEEeeCCcC
Confidence 99999999999999999999999999876 358999999999987 884 9999999974
No 128
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.1e-38 Score=332.81 Aligned_cols=223 Identities=22% Similarity=0.318 Sum_probs=165.7
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.+|+++||+++|+++++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.++.+........
T Consensus 6 ~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~---- 79 (269)
T PRK11831 6 NLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENIPAMSRSRL---- 79 (269)
T ss_pred ceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEccccChhhH----
Confidence 469999999999999999999999999999999999999999999999998754 45667776665432211100
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
..++..++++.+.... .....+.+++.................++.++|+.+|+.. ..++++.+|||
T Consensus 80 ------~~~~~~i~~v~q~~~~------~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSg 146 (269)
T PRK11831 80 ------YTVRKRMSMLFQSGAL------FTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRG-AAKLMPSELSG 146 (269)
T ss_pred ------HHHhhcEEEEeccccc------CCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCH
Confidence 0112223333221110 0111223333221111111122334567888999999974 45789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++ +.
T Consensus 147 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~-~~ 225 (269)
T PRK11831 147 GMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIV-AH 225 (269)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEE-Ee
Confidence 9999999999999999999999999999999999999988764 579999999999999999999999999996 45
Q ss_pred CChhhHH
Q 048654 400 GNFDDFE 406 (723)
Q Consensus 400 g~~~~~~ 406 (723)
|+.+++.
T Consensus 226 g~~~~~~ 232 (269)
T PRK11831 226 GSAQALQ 232 (269)
T ss_pred CCHHHHh
Confidence 7766553
No 129
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.1e-38 Score=339.18 Aligned_cols=206 Identities=23% Similarity=0.413 Sum_probs=169.9
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIGR 564 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig~ 564 (723)
+++++|++++|++ ..+|+|+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+.+. ..+||
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~ 79 (301)
T TIGR03522 2 SIRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEE
Confidence 4889999999975 35899999999999999999999999999999999999999999998763 24899
Q ss_pred Eccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 565 YSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 565 ~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
++|... ..+++.++.. +....+.. ........+..+++.|||.... ++++..|||||||||+||+||+.+|++||
T Consensus 80 ~~q~~~l~~~~tv~e~l~-~~~~~~~~-~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~la~al~~~p~lli 156 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQ-FIAGIYGM-KGQLLKQRVEEMIELVGLRPEQ-HKKIGQLSKGYRQRVGLAQALIHDPKVLI 156 (301)
T ss_pred ecCCCCCCCCCcHHHHHH-HHHHHcCC-CHHHHHHHHHHHHHHCCCchHh-cCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999742 2233433321 11112110 0001234678899999998654 46789999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||+|||+.++..+.++|+++. .|||++||+++++.++|| ||++|++|+++ +.|+.+++..
T Consensus 157 LDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d-----~i~~l~~G~i~-~~g~~~~~~~ 221 (301)
T TIGR03522 157 LDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICD-----RVIIINKGKIV-ADKKLDELSA 221 (301)
T ss_pred EcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCC-----EEEEEECCEEE-EeCCHHHHHH
Confidence 999999999999999999999884 689999999999999995 99999999997 5689888754
No 130
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=341.46 Aligned_cols=226 Identities=21% Similarity=0.240 Sum_probs=167.9
Q ss_pred ceEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC--CCcEEEEEeeeeecCCChHH
Q 048654 165 DITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV--PKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 165 ~I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~--~~~~~i~~~~q~~~~~~~~~ 238 (723)
+|+++||++.|++ ..+|+||||+|.+||++||||+||||||||+++|+|+..+. +..|+|.+.++++.......
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999976 57999999999999999999999999999999999986531 35688888877664332221
Q ss_pred HHHHHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc--cccC
Q 048654 239 IQAVVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK--EMQG 315 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~--~~~~ 315 (723)
+. .++ ..++++.+.... .......+...+.+...........+..+++.++|+.+||.+ ...+
T Consensus 83 ~~----------~~r~~~i~~v~Q~~~~----~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~ 148 (326)
T PRK11022 83 RR----------NLVGAEVAMIFQDPMT----SLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLD 148 (326)
T ss_pred HH----------HHhCCCEEEEecCchh----hcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 11 111 123333221100 000111222222222211111223445678999999999963 3457
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEe
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLH 391 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~ 391 (723)
+++.+|||||+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|.
T Consensus 149 ~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~ 228 (326)
T PRK11022 149 VYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMY 228 (326)
T ss_pred CCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 899999999999999999999999999999999999999999999988764 5799999999999999999999999
Q ss_pred CCEEEEecCChhhH
Q 048654 392 DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 ~G~i~~~~g~~~~~ 405 (723)
+|+|+. .|+.+++
T Consensus 229 ~G~ive-~g~~~~~ 241 (326)
T PRK11022 229 AGQVVE-TGKAHDI 241 (326)
T ss_pred CCEEEE-ECCHHHH
Confidence 999975 4776554
No 131
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.7e-38 Score=331.02 Aligned_cols=206 Identities=24% Similarity=0.386 Sum_probs=165.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------- 559 (723)
+|+++||++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHGQ--TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 79999999999753 5899999999999999999999999999999999999999999987542
Q ss_pred ----eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 ----~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..++|++|... ...++.++..... ............+.+.++++.+||.... ++++.+|||||||||+||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~Gq~qrv~la~a 158 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGP-VIVKGEPKEEATARARELLAKVGLAGKE-TSYPRRLSGGQQQRVAIARA 158 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHcCCcchh-hCChhhCChHHHHHHHHHHH
Confidence 24789998742 2233333322111 1111110001234577889999997543 46779999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 159 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 232 (250)
T PRK11264 159 LAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVAD-----RAIFMDQGRIVE-QGPAKALF 232 (250)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEECCEEEE-eCCHHHHh
Confidence 99999999999999999999999999999876 3689999999999999995 999999999974 57777754
No 132
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.6e-38 Score=332.66 Aligned_cols=209 Identities=25% Similarity=0.380 Sum_probs=166.4
Q ss_pred eEEEEEEEEEcCCC-------cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------
Q 048654 495 LLQLIEVSFSYPNR-------EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~-------~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------- 559 (723)
+|+++||++.|++. ...+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 68999999999631 246899999999999999999999999999999999999999999988652
Q ss_pred ------eeEEEEccccc----cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHH
Q 048654 560 ------LRIGRYSQHFV----DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ------~~ig~~~q~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|... ..+++.++.... ...............+.++++.+|+.....++++..|||||||||+
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~ 160 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEP-LRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRIN 160 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHH
Confidence 14899999742 123333332111 1111111111123567889999999633334677999999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCC
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGT 705 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~ 705 (723)
|||||+.+|+||||||||++||+.+...+.++|.++ +.|||+||||++++..+|| ++++|++|+++. .|+
T Consensus 161 laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~-~g~ 234 (265)
T TIGR02769 161 IARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQ-----RVAVMDKGQIVE-ECD 234 (265)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhc-----EEEEEeCCEEEE-ECC
Confidence 999999999999999999999999999999999875 4699999999999999995 999999999974 578
Q ss_pred HHHHH
Q 048654 706 FEEYK 710 (723)
Q Consensus 706 ~~~~~ 710 (723)
++++.
T Consensus 235 ~~~~~ 239 (265)
T TIGR02769 235 VAQLL 239 (265)
T ss_pred HHHHc
Confidence 77664
No 133
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.8e-38 Score=322.84 Aligned_cols=197 Identities=25% Similarity=0.375 Sum_probs=159.2
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
|+++|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~ 78 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVF 78 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEe
Confidence 4689999999753 5899999999999999999999999999999999999999999988653 2489999
Q ss_pred cccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|... ..+++.++.... ..... .......+.+..+++.+|+.... ++++.+|||||||||+|||||+.+|+|||||
T Consensus 79 q~~~~~~~~tv~~~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qr~~laral~~~p~llllD 155 (213)
T cd03301 79 QNYALYPHMTVYDNIAFG-LKLRK-VPKDEIDERVREVAELLQIEHLL-DRKPKQLSGGQRQRVALGRAIVREPKVFLMD 155 (213)
T ss_pred cChhhccCCCHHHHHHHH-HHhcC-CCHHHHHHHHHHHHHHcCCHHHH-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8742 122333332111 11111 10001234577889999997544 4677999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEec
Q 048654 645 EPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRF 702 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~ 702 (723)
|||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++.+
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d-----~i~~l~~g~~~~~ 212 (213)
T cd03301 156 EPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMAD-----RIAVMNDGQIQQI 212 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcC-----eEEEEECCEEEec
Confidence 999999999999999999875 4689999999999999995 9999999999753
No 134
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.7e-38 Score=324.23 Aligned_cols=199 Identities=25% Similarity=0.372 Sum_probs=161.1
Q ss_pred eEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeE
Q 048654 495 LLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRI 562 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~i 562 (723)
+|+++|+++.|++.. ..+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 478999999997531 15899999999999999999999999999999999999999999988763 248
Q ss_pred EEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 563 GRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 563 g~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|++|... ..+++.++.... ...+. .........+.++++.+|+.... .+++.+|||||||||+|||||+.+|++
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYF-AGLYG-LKGDELTARLEELADRLGMEELL-DRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHH-HHHcC-CCHHHHHHHHHHHHHHcCCHHHH-hhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 89998742 223333332111 11111 10001234678899999997544 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||||||++||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++.
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d-----~i~~l~~G~i~~ 216 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCD-----RVVVLHRGRVVY 216 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcC-----EEEEEECCEEee
Confidence 9999999999999999999999887 3699999999999999995 999999999964
No 135
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.1e-38 Score=347.12 Aligned_cols=209 Identities=28% Similarity=0.412 Sum_probs=171.6
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeE
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRI 562 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~i 562 (723)
..++|+++|+++.|++ ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.++++ ..+
T Consensus 11 ~~~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~i 88 (375)
T PRK09452 11 LSPLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHV 88 (375)
T ss_pred CCceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 3568999999999975 34899999999999999999999999999999999999999999998764 258
Q ss_pred EEEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 563 GRYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 563 g~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|++|++ +..+++.+|+.. .+.... .........+.++++.++|.+... +++.+|||||||||+|||||+.+|+|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~-~l~~~~-~~~~~~~~~~~~~l~~~~l~~~~~-~~p~~LSgGq~QRVaLARaL~~~P~l 165 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAF-GLRMQK-TPAAEITPRVMEALRMVQLEEFAQ-RKPHQLSGGQQQRVAIARAVVNKPKV 165 (375)
T ss_pred EEEecCcccCCCCCHHHHHHH-HHhhcC-CCHHHHHHHHHHHHHHcCCchhhh-CChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999974 334455555322 111111 000012346788999999986554 56799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||||++||+.++..+.+.|+++ +.|||+||||.+++..+|| +|++|++|+|+. .|+++++..
T Consensus 166 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laD-----ri~vl~~G~i~~-~g~~~~i~~ 234 (375)
T PRK09452 166 LLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSD-----RIVVMRDGRIEQ-DGTPREIYE 234 (375)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999999988775 4699999999999999995 999999999985 478877643
No 136
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.8e-38 Score=338.64 Aligned_cols=216 Identities=25% Similarity=0.335 Sum_probs=164.8
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||+++|+++++|+|+||+|++|+++||+|||||||||||++|+|+..| ..|+|.+.+.++.... .
T Consensus 4 ~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~-~------- 73 (303)
T TIGR01288 4 AIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPVPSRA-R------- 73 (303)
T ss_pred EEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcccH-H-------
Confidence 58999999999999999999999999999999999999999999999998654 5667777665542110 0
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
..+..++++.+.... .....+.+.+... .............++.++++.+|+.. ..++++.+||||
T Consensus 74 ------~~~~~i~~v~q~~~~------~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~ll~~~~l~~-~~~~~~~~LSgG 139 (303)
T TIGR01288 74 ------LARVAIGVVPQFDNL------DPEFTVRENLLVF-GRYFGMSTREIEAVIPSLLEFARLES-KADVRVALLSGG 139 (303)
T ss_pred ------HHhhcEEEEeccccC------CcCCcHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHCCChh-HhcCchhhCCHH
Confidence 112223333221111 0111223333211 11111222334566788999999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+
T Consensus 140 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~ 218 (303)
T TIGR01288 140 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKI-AEGR 218 (303)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcC
Confidence 999999999999999999999999999999999999999875 679999999999999999999999999996 4577
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+++
T Consensus 219 ~~~~ 222 (303)
T TIGR01288 219 PHAL 222 (303)
T ss_pred HHHH
Confidence 6554
No 137
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-38 Score=323.44 Aligned_cols=207 Identities=26% Similarity=0.364 Sum_probs=156.0
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.++.+..... .
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~--~------ 70 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERP--DSGEILIDGRDVTGVPP--E------ 70 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcCcCch--h------
Confidence 5789999999989999999999999999999999999999999999998654 45677776665432110 0
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
...++++.+.... .....+.+++..... ...........++.++++.+|+.. ..++++.+|||||
T Consensus 71 -------~~~i~~v~q~~~~------~~~~tv~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~ 135 (213)
T cd03259 71 -------RRNIGMVFQDYAL------FPHLTVAENIAFGLK-LRGVPKAEIRARVRELLELVGLEG-LLNRYPHELSGGQ 135 (213)
T ss_pred -------hccEEEEcCchhh------ccCCcHHHHHHhHHH-HcCCCHHHHHHHHHHHHHHcCChh-hhhcChhhCCHHH
Confidence 0111111111000 001122222211111 111122334567889999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 136 ~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~ 211 (213)
T cd03259 136 QQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQ 211 (213)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999764 5799999999999999999999999999863
No 138
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.2e-38 Score=327.41 Aligned_cols=204 Identities=31% Similarity=0.410 Sum_probs=161.3
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCC-----CCCcceEEECCc-----------
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDL-----SPTEGEVRRSQK----------- 559 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~-----~p~~G~I~~~~~----------- 559 (723)
|+++||++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+++.
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 4689999999753 5899999999999999999999999999999999999 999999988663
Q ss_pred --eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCC-CCCCCHHHHHHHHHHHHHc
Q 048654 560 --LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTP-IAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 560 --~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~-i~~LSGGqkqRv~lAral~ 635 (723)
..++|++|...- .+++.++.... .............+.+..+++.+|+.......+ +.+|||||||||+|||||+
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~ 157 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYG-LRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARALA 157 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhH-HHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHHHh
Confidence 147899987421 22333322111 111110000002345778999999975443333 5899999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
.+|++|||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|++++
T Consensus 158 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~ 226 (227)
T cd03260 158 NEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVAD-----RTAFLLNGRLVE-FGPTEQ 226 (227)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCC-----EEEEEeCCEEEE-ecCccc
Confidence 9999999999999999999999999998874 589999999999999995 999999999975 466543
No 139
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.9e-38 Score=346.28 Aligned_cols=206 Identities=23% Similarity=0.372 Sum_probs=169.7
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCc--ceEEECCc---------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTE--GEVRRSQK---------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~--G~I~~~~~---------~~ig 563 (723)
.|+++||++.|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++ |+|.+++. ..++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig 82 (362)
T TIGR03258 5 GIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLA 82 (362)
T ss_pred EEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEE
Confidence 4789999999975 358999999999999999999999999999999999999999 99998763 3589
Q ss_pred EEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
|++|++ +..+++.+|+. +.+.... .........+.++++.++|.+.. ++++.+|||||||||+|||||+.+|+||
T Consensus 83 ~vfQ~~~l~p~~tv~enl~-~~l~~~~-~~~~~~~~~v~~~l~~~gL~~~~-~~~~~~LSgGq~QRvaLARAL~~~P~ll 159 (362)
T TIGR03258 83 LLFQNYALFPHLKVEDNVA-FGLRAQK-MPKADIAERVADALKLVGLGDAA-AHLPAQLSGGMQQRIAIARAIAIEPDVL 159 (362)
T ss_pred EEECCcccCCCCcHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHhcCCCchh-hCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999974 33445555532 2122111 10011234678899999998655 4677999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc-----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEF-----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~-----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||||++||+.++..+.+.|+++ +.|+|+||||++++..+|| +|++|++|+++. .|+++++..
T Consensus 160 LLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~d-----ri~vl~~G~i~~-~g~~~~~~~ 228 (362)
T TIGR03258 160 LLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLAD-----KAGIMKDGRLAA-HGEPQALYD 228 (362)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHHh
Confidence 999999999999999999988764 4589999999999999995 999999999975 588887654
No 140
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=334.85 Aligned_cols=205 Identities=26% Similarity=0.360 Sum_probs=164.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------ee
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------------LR 561 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------------~~ 561 (723)
||+++||++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 ml~~~~l~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 1 MLATSDLWFRYQDE--PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred CeEEEEEEEEcCCc--ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 58899999999753 5899999999999999999999999999999999999999999987653 14
Q ss_pred EEEEccccccc---cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFVDL---LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|..... .++.++. .+...... .........+..+++.+|+.... ++++.+|||||||||+|||||+.+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l-~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~laraL~~~p 155 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDI-AFSLRNLG-VPEAEITRRVDEALTLVDAQHFR-HQPIQCLSHGQKKRVAIAGALVLQA 155 (271)
T ss_pred eEEEeeChhhccccccHHHHH-HHHHHHcC-CCHHHHHHHHHHHHHHcCCHhHh-cCCchhCCHHHHHHHHHHHHHHcCC
Confidence 78999874211 1222221 11111111 00001124567889999997544 4678999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++. .|+++++.
T Consensus 156 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~ 224 (271)
T PRK13638 156 RYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISD-----AVYVLRQGQILT-HGAPGEVF 224 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999886 3589999999999999995 999999999974 57777654
No 141
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=369.83 Aligned_cols=210 Identities=25% Similarity=0.434 Sum_probs=171.9
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccc-c
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDL-L 573 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~-~ 573 (723)
||.++||+++|+++ .+|+||||+|.+|+++||+|||||||||||++|+|+++|++|+|.+.+...++|++|..... .
T Consensus 1 ~i~i~nls~~~g~~--~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~~~~ 78 (638)
T PRK10636 1 MIVFSSLQIRRGVR--VLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPALPQ 78 (638)
T ss_pred CEEEEEEEEEeCCc--eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCC
Confidence 58899999999863 58999999999999999999999999999999999999999999998877899998853111 1
Q ss_pred CccccHHH------HH-------------------HhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHH
Q 048654 574 TMEETPVS------YL-------------------LRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 574 ~~~~~~~~------~~-------------------~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv 628 (723)
+....... .+ ...+....+.....++..+|..+||.....++++.+|||||||||
T Consensus 79 ~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGerqRv 158 (638)
T PRK10636 79 PALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRL 158 (638)
T ss_pred CHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHHHHH
Confidence 11000000 00 000000001122356788999999974344578899999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
+||++|+.+|+||||||||||||+.++..|.+.|.++++|||+||||++++..+|| +|++|++|+++.|.|++..
T Consensus 159 ~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d-----~i~~L~~G~i~~~~g~~~~ 233 (638)
T PRK10636 159 NLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVD-----KIIHIEQQSLFEYTGNYSS 233 (638)
T ss_pred HHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcC-----EEEEEeCCEEEEecCCHHH
Confidence 99999999999999999999999999999999999999999999999999999995 9999999999888999988
Q ss_pred HHH
Q 048654 709 YKE 711 (723)
Q Consensus 709 ~~~ 711 (723)
|..
T Consensus 234 ~~~ 236 (638)
T PRK10636 234 FEV 236 (638)
T ss_pred HHH
Confidence 864
No 142
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=335.60 Aligned_cols=210 Identities=27% Similarity=0.416 Sum_probs=167.8
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
+++|+++||++.|++. ..+|++|||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~ 81 (283)
T PRK13636 3 DYILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLR 81 (283)
T ss_pred CceEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHH
Confidence 4689999999999632 35899999999999999999999999999999999999999999988763
Q ss_pred eeEEEEccccccccCccccHHHHHHh--hCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 560 LRIGRYSQHFVDLLTMEETPVSYLLR--LHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 560 ~~ig~~~q~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
..++|++|.+...+ ...+....+.. .............+..+++.+||.... ++++.+|||||||||+|||||+.+
T Consensus 82 ~~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LS~G~~qrl~laraL~~~ 159 (283)
T PRK13636 82 ESVGMVFQDPDNQL-FSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-DKPTHCLSFGQKKRVAIAGVLVME 159 (283)
T ss_pred hhEEEEecCcchhh-ccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-hCCcccCCHHHHHHHHHHHHHHcC
Confidence 24899999752111 11122222211 000110001234578899999997544 467899999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ||++|++|+++ +.|+++++..
T Consensus 160 p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~d-----ri~~l~~G~i~-~~g~~~~~~~ 231 (283)
T PRK13636 160 PKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCD-----NVFVMKEGRVI-LQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCC-----EEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999998876 4599999999999999995 99999999997 4688877543
No 143
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-38 Score=323.57 Aligned_cols=198 Identities=31% Similarity=0.400 Sum_probs=159.3
Q ss_pred EEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------eeEEEEcc
Q 048654 496 LQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------LRIGRYSQ 567 (723)
Q Consensus 496 l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------~~ig~~~q 567 (723)
|+++|+++.|++.. .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46899999997521 35899999999999999999999999999999999999999999998763 35899998
Q ss_pred ccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 568 HFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 568 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
... ..+++.++... ...... .........+..+++.+||.... .+++.+|||||||||+|||||+.+|++|||||
T Consensus 81 ~~~~~~~~tv~e~l~~-~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~la~al~~~p~lllLDE 157 (220)
T cd03293 81 QDALLPWLTVLDNVAL-GLELQG-VPKAEARERAEELLELVGLSGFE-NAYPHQLSGGMRQRVALARALAVDPDVLLLDE 157 (220)
T ss_pred ccccccCCCHHHHHHH-HHHHcC-CCHHHHHHHHHHHHHHcCChhhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 642 22333333211 111111 00001234678899999997544 45679999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEE--CCeEEe
Q 048654 646 PTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVE--NGTVSR 701 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~--~G~i~~ 701 (723)
||+|||+.++..+.++|+++ +.|||+||||++++..+|| ++++|+ +|+|+.
T Consensus 158 Pt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~~~G~i~~ 214 (220)
T cd03293 158 PFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLAD-----RVVVLSARPGRIVA 214 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCC-----EEEEEECCCCEEEE
Confidence 99999999999999999875 3589999999999999995 999999 799974
No 144
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=326.02 Aligned_cols=212 Identities=26% Similarity=0.409 Sum_probs=160.1
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|++++|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| .+|+|.+.+..+... ..
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~-~~-------- 69 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVRE-PR-------- 69 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCcC-hH--------
Confidence 5789999999999999999999999999999999999999999999998654 456777666544221 10
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
.++..++++.+.... .....+.+++.... ............++.++++.+|+.. ..++++.+|||||
T Consensus 70 -----~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 136 (220)
T cd03265 70 -----EVRRRIGIVFQDLSV------DDELTGWENLYIHA-RLYGVPGAERRERIDELLDFVGLLE-AADRLVKTYSGGM 136 (220)
T ss_pred -----HHhhcEEEecCCccc------cccCcHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCCHH-HhhCChhhCCHHH
Confidence 011222222221110 01112223322211 1111222344567899999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
||||+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++.. ++
T Consensus 137 ~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~-~~ 215 (220)
T cd03265 137 RRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAE-GT 215 (220)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEe-CC
Confidence 99999999999999999999999999999999999988764 57999999999999999999999999999743 55
Q ss_pred h
Q 048654 402 F 402 (723)
Q Consensus 402 ~ 402 (723)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 145
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.3e-38 Score=343.74 Aligned_cols=216 Identities=23% Similarity=0.314 Sum_probs=168.2
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.+|+++||+++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+.. |..|+|.+.++.+......
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~~~~~~------ 74 (353)
T TIGR03265 3 PYLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDITRLPPQ------ 74 (353)
T ss_pred cEEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHH------
Confidence 46999999999999999999999999999999999999999999999999865 4567777777665322110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
.+.++++.+.... .....+.+++..... ...........++.++++.+||.+ ..++++.+|||
T Consensus 75 ---------~r~ig~v~Q~~~l------fp~~tv~eNi~~~~~-~~~~~~~~~~~~~~~~l~~l~L~~-~~~~~~~~LSg 137 (353)
T TIGR03265 75 ---------KRDYGIVFQSYAL------FPNLTVADNIAYGLK-NRGMGRAEVAERVAELLDLVGLPG-SERKYPGQLSG 137 (353)
T ss_pred ---------HCCEEEEeCCccc------CCCCcHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCc-hhhCChhhCCH
Confidence 1122222221100 112233444433221 112233455678999999999974 56899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||||+|||||+.+|++|||||||++||+..+.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .
T Consensus 138 Gq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~-~ 216 (353)
T TIGR03265 138 GQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQ-V 216 (353)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-E
Confidence 9999999999999999999999999999999999998888754 6799999999999999999999999999975 4
Q ss_pred CChhhH
Q 048654 400 GNFDDF 405 (723)
Q Consensus 400 g~~~~~ 405 (723)
|+.+++
T Consensus 217 g~~~~~ 222 (353)
T TIGR03265 217 GTPQEI 222 (353)
T ss_pred cCHHHH
Confidence 776554
No 146
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.2e-38 Score=345.06 Aligned_cols=207 Identities=30% Similarity=0.410 Sum_probs=169.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRY 565 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~ 565 (723)
+|+++|+++.|++. .+|+|+||+|.+||+++|+|||||||||||++|+|+++|++|+|++++. ..++|+
T Consensus 2 ~L~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v 79 (353)
T PRK10851 2 SIEIANIKKSFGRT--QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFV 79 (353)
T ss_pred EEEEEEEEEEeCCe--EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEE
Confidence 48899999999753 5899999999999999999999999999999999999999999998763 258999
Q ss_pred cccc--ccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 566 SQHF--VDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 566 ~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|++ +..+++.++... .........+.. ..+.+.++|+.++|.... ++++.+|||||||||+|||||+.+|+|
T Consensus 80 ~Q~~~l~p~~tv~eni~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LSgGq~QRvalArAL~~~P~l 157 (353)
T PRK10851 80 FQHYALFRHMTVFDNIAF-GLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-DRYPAQLSGGQKQRVALARALAVEPQI 157 (353)
T ss_pred ecCcccCCCCcHHHHHHh-hhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9974 233445444321 111110000111 235678899999997654 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||||++||+.++..+.+.|+++ +.|+|+||||++++..+|| +|++|++|+|+. .|+++++..
T Consensus 158 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~D-----ri~vl~~G~i~~-~g~~~~i~~ 226 (353)
T PRK10851 158 LLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVAD-----RVVVMSQGNIEQ-AGTPDQVWR 226 (353)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999999998775 3589999999999999995 999999999975 588877643
No 147
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-38 Score=339.58 Aligned_cols=225 Identities=23% Similarity=0.317 Sum_probs=168.2
Q ss_pred cceEEEeEEEEeCC----------eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecC
Q 048654 164 KDITIDNFSVAARG----------KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVG 233 (723)
Q Consensus 164 ~~I~l~nls~~y~~----------~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~ 233 (723)
.+|+++||++.|+. ..+|+||||+|.+|+++||+|+||||||||+++|+|+..+ ..|+|.+.+.++..
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l~~ 81 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDLLK 81 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEcCc
Confidence 46999999999962 5799999999999999999999999999999999998754 46777777766543
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccc
Q 048654 234 DDRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEM 313 (723)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~ 313 (723)
..... ...++..++++.+.... .......+.+.+.+.......+.......++.++|+.+||....
T Consensus 82 ~~~~~----------~~~~r~~i~~v~Q~~~~----~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~ 147 (327)
T PRK11308 82 ADPEA----------QKLLRQKIQIVFQNPYG----SLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEH 147 (327)
T ss_pred CCHHH----------HHHHhCCEEEEEcCchh----hcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHH
Confidence 32211 11122333443321100 00011122232222211111123344567899999999996445
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEE
Q 048654 314 QGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIH 389 (723)
Q Consensus 314 ~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~ 389 (723)
.++++.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|.++ +.|||+||||++++..+||+|++
T Consensus 148 ~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~v 227 (327)
T PRK11308 148 YDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMV 227 (327)
T ss_pred hcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEE
Confidence 68999999999999999999999999999999999999999999999988754 67999999999999999999999
Q ss_pred EeCCEEEEecCChhhH
Q 048654 390 LHDQKLHFYRGNFDDF 405 (723)
Q Consensus 390 L~~G~i~~~~g~~~~~ 405 (723)
|++|+|+.+ |+.+++
T Consensus 228 m~~G~ive~-g~~~~~ 242 (327)
T PRK11308 228 MYLGRCVEK-GTKEQI 242 (327)
T ss_pred EECCEEEEE-CCHHHH
Confidence 999999754 776554
No 148
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-38 Score=325.89 Aligned_cols=206 Identities=33% Similarity=0.442 Sum_probs=164.8
Q ss_pred eEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 495 LLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
||+++|+++.|+++. .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 578999999997531 15899999999999999999999999999999999999999999987653
Q ss_pred -eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 560 -LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 560 -~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
..++|++|... ..+++.++... ...... .........+.++++.+++.... ++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~-~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVAL-PLEIAG-VPKAEIEERVLELLELVGLEDKA-DAYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHH-HHHHcC-CCHHHHHHHHHHHHHHCCChhhh-hcChhhCCHHHHHHHHHHHHHhc
Confidence 24789998742 22333333211 111111 10001234578899999997544 46679999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
+|++|||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++. .|+.+++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~ 228 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICD-----RVAVMEKGEVVE-EGTVEEV 228 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-ecCHHHH
Confidence 99999999999999999999999999876 3589999999999999995 999999999974 5776665
No 149
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.9e-38 Score=325.93 Aligned_cols=216 Identities=29% Similarity=0.389 Sum_probs=158.3
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHHHHHH
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
|+++||+++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+ .|..|+|.+.+..+.....
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~------ 74 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV------ 74 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch------
Confidence 5789999999989999999999999999999999999999999999998611 3456777776655422110
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHhCCCCccccCCC--CC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGS-DAAEAQASKILAGLGFTKEMQGRP--TK 319 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~L~~lgl~~~~~~~~--~~ 319 (723)
+...++..++++.+.... . ...+.+++..... ...... .....++.++++.+|+.... ++. +.
T Consensus 75 -----~~~~~~~~i~~~~q~~~~------~-~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~ 140 (227)
T cd03260 75 -----DVLELRRRVGMVFQKPNP------F-PGSIYDNVAYGLR-LHGIKLKEELDERVEEALRKAALWDEV-KDRLHAL 140 (227)
T ss_pred -----HHHHHHhhEEEEecCchh------c-cccHHHHHHhHHH-hcCCCcHHHHHHHHHHHHHHcCCChHH-hccCCcc
Confidence 001112223333221100 0 1122222221111 111111 22456788999999997543 445 59
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--cEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWK--KTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~--~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++. .|||+||||++++..+||+|++|++|+++.
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 220 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVE 220 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEE
Confidence 999999999999999999999999999999999999999999998763 699999999999999999999999999974
Q ss_pred ecCCh
Q 048654 398 YRGNF 402 (723)
Q Consensus 398 ~~g~~ 402 (723)
+ |+.
T Consensus 221 ~-g~~ 224 (227)
T cd03260 221 F-GPT 224 (227)
T ss_pred e-cCc
Confidence 3 543
No 150
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.9e-38 Score=326.91 Aligned_cols=204 Identities=27% Similarity=0.432 Sum_probs=163.7
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRIG 563 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ig 563 (723)
|+++||++.|+++ .+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGKR--KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCCE--EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 4689999999753 5899999999999999999999999999999999999999999987653 2488
Q ss_pred EEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
|++|... ..+++.++.... ...... ........+..+++.+++.... ++++.+|||||||||+|||||+.+|+||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~-~~~~~~-~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~ll 155 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAV-LEIRGL-SKKEREEKLEELLEEFHITHLR-KSKASSLSGGERRRVEIARALATNPKFL 155 (232)
T ss_pred EecCCccccccCcHHHHHHHH-HHhcCC-CHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9998642 222333332111 111110 0001234567899999997544 4677999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||||||+|||+.+++.+.++|+++ +.|||+||||++++..+|| +|++|++|+++ ..|+.+++.
T Consensus 156 llDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~G~i~-~~~~~~~~~ 221 (232)
T cd03218 156 LLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITD-----RAYIIYEGKVL-AEGTPEEIA 221 (232)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCeEE-EEeCHHHhh
Confidence 999999999999999999999876 3589999999999999995 99999999997 457777654
No 151
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6e-38 Score=339.07 Aligned_cols=226 Identities=19% Similarity=0.330 Sum_probs=170.1
Q ss_pred ccceEEEeEEEEeCC-------------eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeee
Q 048654 163 VKDITIDNFSVAARG-------------KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQ 229 (723)
Q Consensus 163 ~~~I~l~nls~~y~~-------------~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q 229 (723)
.++|+++||++.|+. ..+|+||||+|.+||++||+|+||||||||+++|+|+..| ..|+|.+.+.
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~ 83 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGK 83 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCE
Confidence 357999999999962 5799999999999999999999999999999999998754 5677888777
Q ss_pred eecCCChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHH-hcCchHHHHHHHHHHHhCC
Q 048654 230 EVVGDDRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQ-ILGSDAAEAQASKILAGLG 308 (723)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lg 308 (723)
++....... ...++..++++.+.... .......+.+++.+...... .+...+...++.++|+.+|
T Consensus 84 ~i~~~~~~~----------~~~~r~~i~~v~Q~~~~----~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vg 149 (331)
T PRK15079 84 DLLGMKDDE----------WRAVRSDIQMIFQDPLA----SLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVG 149 (331)
T ss_pred ECCcCCHHH----------HHHHhCceEEEecCchh----hcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcC
Confidence 654332211 11122334443322100 00111233444433221111 1233455678889999999
Q ss_pred CCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhC
Q 048654 309 FTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVC 384 (723)
Q Consensus 309 l~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~ia 384 (723)
+.....++++.+|||||+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+|
T Consensus 150 l~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~ 229 (331)
T PRK15079 150 LLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHIS 229 (331)
T ss_pred CChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhC
Confidence 9655568999999999999999999999999999999999999999999999988754 679999999999999999
Q ss_pred CEEEEEeCCEEEEecCChhhH
Q 048654 385 TEIIHLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 385 d~Ii~L~~G~i~~~~g~~~~~ 405 (723)
|+|++|++|+++. .|+.+++
T Consensus 230 dri~vl~~G~ive-~g~~~~i 249 (331)
T PRK15079 230 DRVLVMYLGHAVE-LGTYDEV 249 (331)
T ss_pred CEEEEEECCEEEE-EcCHHHH
Confidence 9999999999975 4776554
No 152
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.8e-38 Score=329.00 Aligned_cols=208 Identities=27% Similarity=0.366 Sum_probs=165.1
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce-------------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL------------- 560 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~------------- 560 (723)
++|+++||++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 2 ~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 2 PLLQVSGLSKSYGGG--KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred ceEEEeeeEEEeCCc--eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 589999999999753 48999999999999999999999999999999999999999999886521
Q ss_pred -------eEEEEcccccccc----CccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHH
Q 048654 561 -------RIGRYSQHFVDLL----TMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 561 -------~ig~~~q~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~ 629 (723)
.++|++|.....+ ++.++.............. .....+.++++.+++......+++..|||||||||+
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~ 158 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYG-NIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQ 158 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchH-HHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHH
Confidence 3788888742111 1122221111111100000 123567889999999643344678999999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCC
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGT 705 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~ 705 (723)
|||||+.+|++|||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++. .|+
T Consensus 159 laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d-----~~~~l~~G~i~~-~~~ 232 (253)
T TIGR02323 159 IARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQ-----RLLVMQQGRVVE-SGL 232 (253)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEECCEEEE-ECC
Confidence 999999999999999999999999999999988765 4689999999999999995 999999999974 577
Q ss_pred HHHHH
Q 048654 706 FEEYK 710 (723)
Q Consensus 706 ~~~~~ 710 (723)
++++.
T Consensus 233 ~~~~~ 237 (253)
T TIGR02323 233 TDQVL 237 (253)
T ss_pred HHHHh
Confidence 76664
No 153
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-38 Score=324.14 Aligned_cols=194 Identities=31% Similarity=0.425 Sum_probs=155.5
Q ss_pred EEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------eeEEEEcccccc
Q 048654 498 LIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------LRIGRYSQHFVD 571 (723)
Q Consensus 498 ~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------~~ig~~~q~~~~ 571 (723)
++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|+...
T Consensus 2 ~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~ 79 (213)
T cd03235 2 VEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSI 79 (213)
T ss_pred cccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecccccc
Confidence 6799999975 35899999999999999999999999999999999999999999998873 358999997532
Q ss_pred ccCccccHHHHHHhhCCCC------CCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 572 LLTMEETPVSYLLRLHPDQ------EGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
......+..+.+....... ......+.+..+++.+++.... ++++.+|||||||||+|||||+.+|+||||||
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~llllDE 158 (213)
T cd03235 80 DRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-DRQIGELSGGQQQRVLLARALVQDPDLLLLDE 158 (213)
T ss_pred ccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 1111123233221111100 0001234678899999997543 46779999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 646 PTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
||+|||+.++..+.++|.++. .|||+||||++++..+|| +|++|++|.+
T Consensus 159 Pt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d-----~i~~l~~~~~ 210 (213)
T cd03235 159 PFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFD-----RVLLLNRTVV 210 (213)
T ss_pred CcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEcCcEe
Confidence 999999999999999998863 689999999999999995 9999988743
No 154
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-38 Score=341.77 Aligned_cols=220 Identities=24% Similarity=0.367 Sum_probs=166.7
Q ss_pred ceEEEeEEEEeC----CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 165 DITIDNFSVAAR----GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 165 ~I~l~nls~~y~----~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
+|+++||+++|+ ++++|+|+||+|++|+++||+||||||||||+++|+|+..| ..|+|.+.+.++.......
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~~~~~~~-- 76 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLTALSEKE-- 76 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHH--
Confidence 488999999997 46899999999999999999999999999999999998654 5677777776654322111
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
...++..++++.+.... .....+.+++.... ............++.++++.+|+.. ..++++.+
T Consensus 77 --------~~~~~~~ig~v~q~~~l------~~~~tv~eni~~~~-~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~ 140 (343)
T PRK11153 77 --------LRKARRQIGMIFQHFNL------LSSRTVFDNVALPL-ELAGTPKAEIKARVTELLELVGLSD-KADRYPAQ 140 (343)
T ss_pred --------HHHHhcCEEEEeCCCcc------CCCCcHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCCch-hhhCChhh
Confidence 11122333433322111 01122333332221 1112223344567889999999974 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++
T Consensus 141 LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~ 220 (343)
T PRK11153 141 LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLV 220 (343)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999865 579999999999999999999999999997
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+.+++
T Consensus 221 ~-~g~~~~~ 228 (343)
T PRK11153 221 E-QGTVSEV 228 (343)
T ss_pred E-EcCHHHH
Confidence 4 5666554
No 155
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.8e-38 Score=328.65 Aligned_cols=202 Identities=36% Similarity=0.549 Sum_probs=165.7
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEcccccccc
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLL 573 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~~ 573 (723)
++|+++||++.|+++ .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++++..++|++|.+....
T Consensus 3 ~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~~~i~~v~q~~~~~~ 80 (251)
T PRK09544 3 SLVSLENVSVSFGQR--RVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGKLRIGYVPQKLYLDT 80 (251)
T ss_pred cEEEEeceEEEECCc--eEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCccCEEEecccccccc
Confidence 589999999999753 589999999999999999999999999999999999999999999988778999999742211
Q ss_pred CccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHH
Q 048654 574 TMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQ 653 (723)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~ 653 (723)
.+..+...+ ....+. . ..+.+..+++.+|+.... ++++.+|||||||||+|||||+.+|++|||||||+|||+.
T Consensus 81 ~l~~~~~~~-~~~~~~---~-~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~ 154 (251)
T PRK09544 81 TLPLTVNRF-LRLRPG---T-KKEDILPALKRVQAGHLI-DAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVN 154 (251)
T ss_pred ccChhHHHH-Hhcccc---c-cHHHHHHHHHHcCChHHH-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHH
Confidence 111122222 111111 1 234578899999997544 4677999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 654 SIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 654 s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
++..+.++|.++ +.|||+||||++++..+|| +|++|++ +|+ ..|+++++.
T Consensus 155 ~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d-----~i~~l~~-~i~-~~g~~~~~~ 208 (251)
T PRK09544 155 GQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTD-----EVLCLNH-HIC-CSGTPEVVS 208 (251)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEECC-ceE-eeCCHHHHh
Confidence 999999999765 4689999999999999995 9999965 676 457777654
No 156
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=334.29 Aligned_cols=209 Identities=29% Similarity=0.384 Sum_probs=165.1
Q ss_pred eEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 495 LLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
.|+++||++.|++.. .++|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999997521 25899999999999999999999999999999999999999999988653
Q ss_pred ---eeEEEEccccc-cc--cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFV-DL--LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 ---~~ig~~~q~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..++|++|... .. .++.++.. +....+. .........+..+++.+||......+++.+|||||||||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~a 159 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVA-FGPQNFG-VSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGI 159 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHH
Confidence 24789998742 11 22322221 1111111 00001223467889999997433356789999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+|| ++++|++|+++. .|+++++.
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~ 233 (280)
T PRK13649 160 LAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYAD-----FVYVLEKGKLVL-SGKPKDIF 233 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHh
Confidence 99999999999999999999999999999876 3699999999999999995 999999999974 57777654
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
.
T Consensus 234 ~ 234 (280)
T PRK13649 234 Q 234 (280)
T ss_pred c
Confidence 3
No 157
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.3e-38 Score=328.21 Aligned_cols=231 Identities=26% Similarity=0.364 Sum_probs=167.1
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH-
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV- 243 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~- 243 (723)
.|+++||++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+...... ...+.
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~-~~~~~~ 81 (257)
T PRK10619 5 KLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTINLVRDK-DGQLKV 81 (257)
T ss_pred cEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccccccc-cccccc
Confidence 48999999999999999999999999999999999999999999999998654 456776666544210000 00000
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
....+...++..++++.+.... .....+.+++......+..........++.++++.+|+.....++++.+|||
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l------~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~ 155 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNL------WSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSG 155 (257)
T ss_pred ccchHHHHHhhceEEEecCccc------CCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCH
Confidence 0000111223334444332111 0111223333221111111223345677889999999975434688999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|
T Consensus 156 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~ 234 (257)
T PRK10619 156 GQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE-EEG 234 (257)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeC
Confidence 9999999999999999999999999999999999999998765 679999999999999999999999999997 457
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+++++
T Consensus 235 ~~~~~ 239 (257)
T PRK10619 235 APEQL 239 (257)
T ss_pred CHHHh
Confidence 76655
No 158
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.1e-38 Score=335.61 Aligned_cols=216 Identities=21% Similarity=0.365 Sum_probs=167.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++|++++|+++.+|+|+||+|++|+++||+|||||||||||++|+|+..| ..|+|.+.+..+... ..
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~~~~-~~------- 71 (301)
T TIGR03522 2 SIRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDVLQN-PK------- 71 (301)
T ss_pred EEEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccC-hH-------
Confidence 48999999999999999999999999999999999999999999999998654 556777666554321 11
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
.+++.++++.+.... .....+.+++.. ...+..........++.++++.+|+.+ ..++++..||||
T Consensus 72 ------~~~~~ig~~~q~~~l------~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G 137 (301)
T TIGR03522 72 ------EVQRNIGYLPEHNPL------YLDMYVREYLQF-IAGIYGMKGQLLKQRVEEMIELVGLRP-EQHKKIGQLSKG 137 (301)
T ss_pred ------HHHhceEEecCCCCC------CCCCcHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHCCCch-HhcCchhhCCHH
Confidence 122333433322111 111123333322 122222223444667899999999975 457999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCCh
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNF 402 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~ 402 (723)
|||||+|||||+.+|++|||||||+|||+.++.+++++|+++ +.|||++||+++++.++||||++|++|+++ +.|+.
T Consensus 138 ~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~-~~g~~ 216 (301)
T TIGR03522 138 YRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIV-ADKKL 216 (301)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EeCCH
Confidence 999999999999999999999999999999999999999877 579999999999999999999999999997 56777
Q ss_pred hhH
Q 048654 403 DDF 405 (723)
Q Consensus 403 ~~~ 405 (723)
+++
T Consensus 217 ~~~ 219 (301)
T TIGR03522 217 DEL 219 (301)
T ss_pred HHH
Confidence 654
No 159
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.6e-38 Score=321.96 Aligned_cols=195 Identities=33% Similarity=0.495 Sum_probs=157.0
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~ 560 (723)
||+++|+++.|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 1 MIEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred CEEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 57899999999522 35899999999999999999999999999999999999999999987652 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
.++|++|... ..+++.++.... ..... .........+.++++.+++.... ++++.+|||||||||+|||||+.+|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p 156 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALP-LEVRG-KKEREIQRRVGAALRQVGLEHKA-DAFPEQLSGGEQQRVAIARAIVNSP 156 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHH-HHHcC-CCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhCCC
Confidence 4789998642 123333332111 11111 10001234678899999997544 4667899999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCe
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGT 698 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~ 698 (723)
++|||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| ++++|++|+
T Consensus 157 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d-----~i~~l~~G~ 214 (214)
T TIGR02673 157 PLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAH-----RVIILDDGR 214 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcC-----EEEEecCCC
Confidence 999999999999999999999999876 4689999999999999995 999999884
No 160
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-38 Score=340.61 Aligned_cols=209 Identities=22% Similarity=0.316 Sum_probs=166.0
Q ss_pred eEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC----CCcceEEECCce--------
Q 048654 495 LLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS----PTEGEVRRSQKL-------- 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~----p~~G~I~~~~~~-------- 560 (723)
+|+++||++.|+... ..+|+||||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.+++..
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 689999999997532 358999999999999999999999999999999999998 489999987631
Q ss_pred -------eEEEEcccccc----ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC--CCcCCCCCCCHHHHHH
Q 048654 561 -------RIGRYSQHFVD----LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH--NHLTPIAKLSGGQKAR 627 (723)
Q Consensus 561 -------~ig~~~q~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~--~~~~~i~~LSGGqkqR 627 (723)
.++|++|+... .+++.++....+ ..+.........+.+.++|+.+||... ..++.+.+|||||+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l-~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QR 161 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAI-KVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQR 161 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHH
Confidence 48999997532 222222222221 111111111124567889999999642 2235668999999999
Q ss_pred HHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecC
Q 048654 628 VVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFP 703 (723)
Q Consensus 628 v~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~ 703 (723)
|+|||||+.+|+||||||||++||+.++..++++|+++ +.|||+||||+.++..+|| ||++|++|+|++ .
T Consensus 162 v~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~ad-----ri~vm~~G~ive-~ 235 (326)
T PRK11022 162 VMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAH-----KIIVMYAGQVVE-T 235 (326)
T ss_pred HHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-E
Confidence 99999999999999999999999999999999999876 3589999999999999995 999999999986 4
Q ss_pred CCHHHHH
Q 048654 704 GTFEEYK 710 (723)
Q Consensus 704 g~~~~~~ 710 (723)
|+.+++.
T Consensus 236 g~~~~~~ 242 (326)
T PRK11022 236 GKAHDIF 242 (326)
T ss_pred CCHHHHh
Confidence 7776654
No 161
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.4e-38 Score=325.23 Aligned_cols=206 Identities=29% Similarity=0.399 Sum_probs=164.4
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIGR 564 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig~ 564 (723)
+|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 1 ALEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred CEEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 5789999999975 35899999999999999999999999999999999999999999988763 24789
Q ss_pred Eccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 565 YSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 565 ~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
++|... ...++.++... ..... ..........+.++++.+||.... ++++.+|||||||||+|||||+.+|+|||
T Consensus 79 ~~q~~~~~~~~t~~~~l~~-~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~laral~~~p~lll 155 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRY-HAALH-GLSRAEARERIAALLARLGLAERA-DDKVRELNGGHRRRVEIARALLHRPALLL 155 (236)
T ss_pred eCCCCCCcccCcHHHHHHH-HHHhc-CCCHHHHHHHHHHHHHHcCChhhh-cCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 998742 12233332211 11111 110001234577899999997544 46679999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
|||||+|||+.++..+.++|.++ +.|||+||||++++.. | |++++|++|+++. .|+++++...
T Consensus 156 lDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~-----d~i~~l~~G~i~~-~~~~~~~~~~ 222 (236)
T TIGR03864 156 LDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-D-----DRLVVLHRGRVLA-DGAAAELRGA 222 (236)
T ss_pred EcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-C-----CEEEEEeCCeEEE-eCCHHHHHHH
Confidence 99999999999999999999876 3589999999999974 8 4999999999974 5788776554
No 162
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-38 Score=320.43 Aligned_cols=196 Identities=26% Similarity=0.445 Sum_probs=159.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------eeEEEEccc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------LRIGRYSQH 568 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------~~ig~~~q~ 568 (723)
|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|.
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~ 78 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEE 78 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccC
Confidence 468999999975 35899999999999999999999999999999999999999999998763 358999987
Q ss_pred cc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccC
Q 048654 569 FV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEP 646 (723)
Q Consensus 569 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEP 646 (723)
.. ..+++.++... ....+. .......+.+.++++.+|+.... ++++.+|||||||||+||+||+.+|++||||||
T Consensus 79 ~~~~~~~tv~e~l~~-~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP 155 (210)
T cd03269 79 RGLYPKMKVIDQLVY-LAQLKG-LKKEEARRRIDEWLERLELSEYA-NKRVEELSKGNQQKVQFIAAVIHDPELLILDEP 155 (210)
T ss_pred CcCCcCCcHHHHHHH-HHHHcC-CChHHHHHHHHHHHHHcCChHHH-hCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 42 22333333221 111111 10011234578899999997544 456799999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 647 TNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 647 T~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|+|||+.++..+.+.|+++ +.|||+||||.+++..+|| ++++|++|+++.
T Consensus 156 ~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~g~i~~ 208 (210)
T cd03269 156 FSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCD-----RVLLLNKGRAVL 208 (210)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhh-----EEEEEeCCEEEe
Confidence 9999999999999999876 3689999999999999995 999999999964
No 163
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.4e-38 Score=326.83 Aligned_cols=207 Identities=27% Similarity=0.396 Sum_probs=165.4
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------ee
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------------LR 561 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------------~~ 561 (723)
+|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|++++. ..
T Consensus 1 ~l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 1 MIEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred CEEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 5789999999975 35899999999999999999999999999999999999999999987652 14
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
++|++|... ..+++.++......... ..........+.++++.+|+.... ++++.+|||||||||+|||||+.+|+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~la~al~~~p~ 156 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVR-GASKEEAEKQARELLAKVGLAERA-HHYPSELSGGQQQRVAIARALAVKPK 156 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhc-CCCHHHHHHHHHHHHHHcCChHHH-hcChhhcCHHHHHHHHHHHHHhcCCC
Confidence 789998642 12233333211100011 100001234577899999997544 46679999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++. .|+++++.+
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~~ 225 (240)
T PRK09493 157 LMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVAS-----RLIFIDKGRIAE-DGDPQVLIK 225 (240)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEe-eCCHHHHhc
Confidence 99999999999999999999999876 3689999999999999995 999999999974 578777643
No 164
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.9e-38 Score=322.18 Aligned_cols=197 Identities=30% Similarity=0.405 Sum_probs=157.1
Q ss_pred eEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 495 LLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
+|+++||++.|++.. ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 1 LLKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred CEEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHH
Confidence 478999999997421 35899999999999999999999999999999999999999999988652
Q ss_pred --eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 560 --LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 560 --~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
..++|++|... ..+++.++.... .... ..........+.++++.+|+.... ++++.+|||||||||+|||+|+
T Consensus 81 ~~~~i~~v~q~~~~~~~~tv~~~l~~~-~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~ 157 (221)
T TIGR02211 81 RNKKLGFIYQFHHLLPDFTALENVAMP-LLIG-KKSVKEAKERAYEMLEKVGLEHRI-NHRPSELSGGERQRVAIARALV 157 (221)
T ss_pred HHhcEEEEecccccCCCCcHHHHHHHH-HHhc-CCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHh
Confidence 24899998742 223333332111 1111 110011234577899999997544 4677999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEE
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVS 700 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~ 700 (723)
.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++.. || +|++|++|+++
T Consensus 158 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d-----~v~~l~~G~i~ 220 (221)
T TIGR02211 158 NQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LD-----RVLEMKDGQLF 220 (221)
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cC-----EEEEEeCCEec
Confidence 999999999999999999999999999865 4689999999999864 64 99999999984
No 165
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.4e-38 Score=346.70 Aligned_cols=219 Identities=30% Similarity=0.413 Sum_probs=166.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.+|+++||+++|+++++|+|+||+|++|++++|+||||||||||||+|+|+..| .+|.|.+.+..+.......
T Consensus 2 ~~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i~~~~~~~----- 74 (402)
T PRK09536 2 PMIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDVEALSARA----- 74 (402)
T ss_pred ceEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEcCcCCHHH-----
Confidence 369999999999999999999999999999999999999999999999998654 5667777776654322111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHH-HHHHhcC--chHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELY-EKLQILG--SDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~--~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
+++.++++.+.... .....+.+.+.... .....+. ......++.++|+.+|+. ...++++.+
T Consensus 75 --------~~~~ig~v~q~~~l------~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~-~~~~~~~~~ 139 (402)
T PRK09536 75 --------ASRRVASVPQDTSL------SFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVA-QFADRPVTS 139 (402)
T ss_pred --------HhcceEEEccCCCC------CCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCc-hhhcCChhh
Confidence 12223333221111 00112222221110 0000111 234467889999999997 456899999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
|||||||||+|||||+++|+||||||||++||+.++..++++|+++ +.|||++|||++++..+||+|++|++|+++.
T Consensus 140 LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~ 219 (402)
T PRK09536 140 LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRA 219 (402)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999988865 5799999999999999999999999999974
Q ss_pred ecCChhhH
Q 048654 398 YRGNFDDF 405 (723)
Q Consensus 398 ~~g~~~~~ 405 (723)
.|+++++
T Consensus 220 -~G~~~ev 226 (402)
T PRK09536 220 -AGPPADV 226 (402)
T ss_pred -ecCHHHH
Confidence 5777665
No 166
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3e-38 Score=325.11 Aligned_cols=207 Identities=26% Similarity=0.352 Sum_probs=163.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRIG 563 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ig 563 (723)
|+++||++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 4689999999753 5899999999999999999999999999999999999999999988652 2488
Q ss_pred EEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCC-CCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 564 RYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFG-LPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 564 ~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g-l~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
|++|... ..+++.++.. +..... +....+.+..+++.++ +... .++++.+|||||||||+|||||+.+|++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~-~~~~~~----~~~~~~~~~~~l~~~~~l~~~-~~~~~~~LS~G~~qrv~la~al~~~p~i 152 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLL-TGLAAL----PRRSRKIPDEIYELFPVLKEM-LGRRGGDLSGGQQQQLAIARALVTRPKL 152 (230)
T ss_pred EeccCCcccCCCcHHHHHH-HHHHhc----CcchHHHHHHHHHHHHhHHHH-hhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9998742 2223322221 111111 1112334566777776 4433 3467899999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKEDLQRE 716 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~~~~~ 716 (723)
|||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++. .|+.+++....+..
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d-----~v~~l~~g~i~~-~~~~~~~~~~~~~~ 226 (230)
T TIGR03410 153 LLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELAD-----RYYVMERGRVVA-SGAGDELDEDKVRR 226 (230)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-ECCHHHcChHHHHH
Confidence 9999999999999999999999875 3689999999999999995 999999999974 58888775544433
No 167
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=332.67 Aligned_cols=211 Identities=27% Similarity=0.393 Sum_probs=167.4
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------e
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------L 560 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~ 560 (723)
.+++|+++||++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 8 ~~~~l~i~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 8 SDTTFALRNVSFRVPGR--TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred CCceEEEeeEEEEECCE--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 45789999999999753 5899999999999999999999999999999999999999999998763 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCC--CCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQ--EGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
.++|++|... ..+++.++............ ........+..+++.+++.... ++++.+|||||||||+|||||+.
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~ 164 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLA-HRLVDSLSGGERQRAWIAMLVAQ 164 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-cCCcccCCHHHHHHHHHHHHHhc
Confidence 4889998642 22223222111000000000 0001234578899999997543 45678999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++.++|| +|++|++|+|+. .|+++++..
T Consensus 165 ~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d-----~i~~l~~G~i~~-~~~~~~~~~ 237 (265)
T PRK10575 165 DSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCD-----YLVALRGGEMIA-QGTPAELMR 237 (265)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCeEEE-ecCHHHhcC
Confidence 99999999999999999999999999876 4689999999999999995 999999999974 577777643
No 168
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.6e-38 Score=323.46 Aligned_cols=220 Identities=25% Similarity=0.313 Sum_probs=165.2
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+.. |..|+|.+.+..+......
T Consensus 1 ~l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~------- 71 (240)
T PRK09493 1 MIEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVD------- 71 (240)
T ss_pred CEEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChh-------
Confidence 3789999999998899999999999999999999999999999999999865 4566777766554321110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
...++..++++.+.... .....+.+++.................++.++++.+|+.. ..++++.+||||
T Consensus 72 ----~~~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G 140 (240)
T PRK09493 72 ----ERLIRQEAGMVFQQFYL------FPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAE-RAHHYPSELSGG 140 (240)
T ss_pred ----HHHHhhceEEEeccccc------CCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChH-HHhcChhhcCHH
Confidence 01112233333221111 0011222333211111111223344567889999999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|+++ +.|+
T Consensus 141 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~ 219 (240)
T PRK09493 141 QQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIA-EDGD 219 (240)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eeCC
Confidence 999999999999999999999999999999999999999765 579999999999999999999999999997 4577
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
++++
T Consensus 220 ~~~~ 223 (240)
T PRK09493 220 PQVL 223 (240)
T ss_pred HHHH
Confidence 6655
No 169
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.7e-38 Score=322.65 Aligned_cols=194 Identities=38% Similarity=0.483 Sum_probs=154.8
Q ss_pred EEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEEE
Q 048654 497 QLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGRY 565 (723)
Q Consensus 497 ~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~~ 565 (723)
+++|+++.|++....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 368999999752235899999999999999999999999999999999999999999988763 247899
Q ss_pred ccccc---cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 566 SQHFV---DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 566 ~q~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
+|... ...++.++.... ..... .........+.++++.++|.... ++++.+|||||||||+|||||+.+|++||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~~p~lll 157 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFG-LENLG-LPEEEIEERVEEALELVGLEGLR-DRSPFTLSGGQKQRVAIAGVLAMDPDILL 157 (211)
T ss_pred ecChhhhcCCCcHHHHHHHH-HHHcC-CCHHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 98742 122333322111 11110 00001234577899999997544 46779999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCe
Q 048654 643 LDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGT 698 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~ 698 (723)
|||||+|||+.++..+.+.|.++. .|||+||||++++..+|| +|++|++|+
T Consensus 158 lDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d-----~i~~l~~G~ 211 (211)
T cd03225 158 LDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELAD-----RVIVLEDGK 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCC
Confidence 999999999999999999998873 589999999999999995 999999884
No 170
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.3e-38 Score=342.71 Aligned_cols=218 Identities=23% Similarity=0.315 Sum_probs=167.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++||+++|+++.+|+|+||+|.+|++++|+|||||||||||++|+|+..|....|+|.+.+..+......
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~------- 77 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH------- 77 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH-------
Confidence 4899999999999999999999999999999999999999999999999875543117777777665322110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
...++++.+.... .....+.+++...+. ...........++.++++.+||.+ ..++++.+||||
T Consensus 78 --------~r~ig~vfQ~~~l------~p~~tv~enl~~~l~-~~~~~~~~~~~~v~~~l~~~gL~~-~~~~~~~~LSgG 141 (362)
T TIGR03258 78 --------KRGLALLFQNYAL------FPHLKVEDNVAFGLR-AQKMPKADIAERVADALKLVGLGD-AAAHLPAQLSGG 141 (362)
T ss_pred --------HCCEEEEECCccc------CCCCcHHHHHHHHHH-HcCCCHHHHHHHHHHHHHhcCCCc-hhhCChhhCCHH
Confidence 1112222211100 112233444433221 112233455678999999999974 568999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc-----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW-----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~-----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
|||||+|||||+.+|+||||||||++||+..+.+|.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~-~ 220 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAA-H 220 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-E
Confidence 999999999999999999999999999999999999888643 5799999999999999999999999999975 4
Q ss_pred CChhhHH
Q 048654 400 GNFDDFE 406 (723)
Q Consensus 400 g~~~~~~ 406 (723)
|+++++.
T Consensus 221 g~~~~~~ 227 (362)
T TIGR03258 221 GEPQALY 227 (362)
T ss_pred cCHHHHH
Confidence 7776653
No 171
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.2e-38 Score=319.95 Aligned_cols=192 Identities=28% Similarity=0.412 Sum_probs=158.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~ 78 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALI 78 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEec
Confidence 468999999975 35899999999999999999999999999999999999999999998764 2488999
Q ss_pred cccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|... ...++.++.... ...+ . . ....+..+++.+++.... ++++.+|||||||||+|||||+.+|++||||
T Consensus 79 q~~~~~~~~tv~e~l~~~-~~~~-~---~-~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llllD 151 (208)
T cd03268 79 EAPGFYPNLTARENLRLL-ARLL-G---I-RKKRIDEVLDVVGLKDSA-KKKVKGFSLGMKQRLGIALALLGNPDLLILD 151 (208)
T ss_pred CCCccCccCcHHHHHHHH-HHhc-C---C-cHHHHHHHHHHcCCHHHH-hhhHhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 8642 223333332111 1111 1 1 235678899999997544 4667999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 645 EPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||++||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++.
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d-----~v~~l~~g~i~~ 206 (208)
T cd03268 152 EPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVAD-----RIGIINKGKLIE 206 (208)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcC-----EEEEEECCEEEe
Confidence 999999999999999999876 3689999999999999995 999999999864
No 172
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=9.5e-38 Score=325.40 Aligned_cols=226 Identities=23% Similarity=0.354 Sum_probs=165.3
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||+++|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|.|.+.+..+.........
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~---- 76 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITIDTARSLSQQ---- 76 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccccccch----
Confidence 59999999999988999999999999999999999999999999999998654 556777766654321100000
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
......++..++++.+.... .....+.+++.................++.++++.+|+.. ..++++.+||||
T Consensus 77 -~~~~~~~~~~i~~v~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G 148 (250)
T PRK11264 77 -KGLIRQLRQHVGFVFQNFNL------FPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAG-KETSYPRRLSGG 148 (250)
T ss_pred -hhHHHHhhhhEEEEecCccc------CCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcc-hhhCChhhCChH
Confidence 00001122233333221111 0011223333221111111222334567889999999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~-~~~~ 227 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIV-EQGP 227 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCC
Confidence 999999999999999999999999999999999999988764 579999999999999999999999999996 4577
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+++
T Consensus 228 ~~~~ 231 (250)
T PRK11264 228 AKAL 231 (250)
T ss_pred HHHH
Confidence 6654
No 173
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-38 Score=328.74 Aligned_cols=197 Identities=28% Similarity=0.398 Sum_probs=159.6
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------eeEEEEccc
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------LRIGRYSQH 568 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------~~ig~~~q~ 568 (723)
||+++|+++.|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|++|.
T Consensus 1 ml~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~ 78 (255)
T PRK11248 1 MLQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN 78 (255)
T ss_pred CEEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC
Confidence 5889999999975 35899999999999999999999999999999999999999999998763 247999987
Q ss_pred cc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccC
Q 048654 569 FV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEP 646 (723)
Q Consensus 569 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEP 646 (723)
.. ...++.++... ...... .........+.++++.+||.... ++++.+|||||||||+|||||+.+|+|||||||
T Consensus 79 ~~~~~~~tv~e~l~~-~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEP 155 (255)
T PRK11248 79 EGLLPWRNVQDNVAF-GLQLAG-VEKMQRLEIAHQMLKKVGLEGAE-KRYIWQLSGGQRQRVGIARALAANPQLLLLDEP 155 (255)
T ss_pred CccCCCCcHHHHHHh-HHHHcC-CCHHHHHHHHHHHHHHcCChhHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 42 22233333211 111111 00001234578899999997544 466799999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEE--CCeEEe
Q 048654 647 TNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVE--NGTVSR 701 (723)
Q Consensus 647 T~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~--~G~i~~ 701 (723)
|+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|+ +|+|+.
T Consensus 156 t~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d-----~i~~l~~~~G~i~~ 211 (255)
T PRK11248 156 FGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMAT-----ELVLLSPGPGRVVE 211 (255)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCCcEEEE
Confidence 9999999999999999886 3689999999999999995 999998 599874
No 174
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.3e-38 Score=319.65 Aligned_cols=210 Identities=28% Similarity=0.351 Sum_probs=156.6
Q ss_pred ceEEEeEEEEe-CCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAA-RGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y-~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++|+++.| +++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+.++........
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~~---- 74 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVNRLRGRQL---- 74 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcccCCHHHH----
Confidence 37899999999 467899999999999999999999999999999999998654 45677776665532211100
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
..++..++++.+.... .....+.+++..... ...........++.++++.+|+.. ..++++.+|||
T Consensus 75 ------~~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~ 140 (214)
T TIGR02673 75 ------PLLRRRIGVVFQDFRL------LPDRTVYENVALPLE-VRGKKEREIQRRVGAALRQVGLEH-KADAFPEQLSG 140 (214)
T ss_pred ------HHHHhheEEEecChhh------ccCCcHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCH
Confidence 0112223332221100 001122222221111 111222334567889999999974 45788999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+|||+++++..+||+|++|++|+
T Consensus 141 G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 141 GEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999999999999999864 6799999999999999999999999884
No 175
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-38 Score=344.59 Aligned_cols=208 Identities=28% Similarity=0.397 Sum_probs=170.2
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEE
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIG 563 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig 563 (723)
.++|+++|+++.|++ ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|++++. ..+|
T Consensus 17 ~~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 17 TPLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred CceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 568999999999975 35899999999999999999999999999999999999999999998764 2589
Q ss_pred EEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 564 RYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 564 ~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
|++|++ +..+++.+|.. +.+.... .......+++.++++.++|.+... +.+.+|||||||||+|||||+.+|+||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~-~~l~~~~-~~~~~~~~~v~~~l~~l~L~~~~~-~~~~~LSgGq~QRVaLARAL~~~P~lL 171 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIA-FGLKQDK-LPKAEIASRVNEMLGLVHMQEFAK-RKPHQLSGGQRQRVALARSLAKRPKLL 171 (377)
T ss_pred EEeCCCccCCCCCHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCCchhhc-CChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999974 34455655532 2221111 000112356788999999986544 667999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHH----cCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDE----FTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~----~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||||++||+.++..+.+.|.+ ++.|+|+||||++++..+|| +|++|++|+|+. .|+++++..
T Consensus 172 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laD-----ri~vl~~G~i~~-~g~~~~~~~ 239 (377)
T PRK11607 172 LLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG-----RIAIMNRGKFVQ-IGEPEEIYE 239 (377)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCC-----EEEEEeCCEEEE-EcCHHHHHh
Confidence 99999999999999888766654 45799999999999999995 999999999985 588877654
No 176
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-38 Score=322.09 Aligned_cols=220 Identities=22% Similarity=0.335 Sum_probs=163.9
Q ss_pred ceEEEeEEEEeCCe----eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 165 DITIDNFSVAARGK----ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 165 ~I~l~nls~~y~~~----~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
+|+++|++++|+++ ++|+++||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.++++.......
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~-- 76 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLTLLSGKE-- 76 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcccCCHHH--
Confidence 37899999999876 899999999999999999999999999999999998765 4566777666553221110
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
...++..++++.+.... .....+.+++..... ............+.++++.+|+.. ..++++.+
T Consensus 77 --------~~~~~~~i~~~~q~~~~------~~~~t~~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~ 140 (233)
T cd03258 77 --------LRKARRRIGMIFQHFNL------LSSRTVFENVALPLE-IAGVPKAEIEERVLELLELVGLED-KADAYPAQ 140 (233)
T ss_pred --------HHHHHhheEEEccCccc------CCCCcHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHCCChh-hhhcChhh
Confidence 01112233333221111 011122333322111 111222334567889999999974 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+|||+++++..+||++++|++|+++
T Consensus 141 LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~ 220 (233)
T cd03258 141 LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVV 220 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999998754 579999999999999999999999999997
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+.+++
T Consensus 221 ~-~~~~~~~ 228 (233)
T cd03258 221 E-EGTVEEV 228 (233)
T ss_pred E-ecCHHHH
Confidence 4 4665443
No 177
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-38 Score=325.80 Aligned_cols=202 Identities=29% Similarity=0.397 Sum_probs=163.4
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
.|+++|+++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFGK--EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 58899999999753 5899999999999999999999999999999999999999999988763 2478
Q ss_pred EEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEe
Q 048654 564 RYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLL 643 (723)
Q Consensus 564 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlL 643 (723)
|++|...- + ..+....+. ......+ .....+.++++.+++......+++.+|||||||||+|||||+.+|+||||
T Consensus 81 ~~~q~~~~-~--~~tv~e~l~-~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 155 (241)
T PRK14250 81 MVFQQPHL-F--EGTVKDNIE-YGPMLKG-EKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLL 155 (241)
T ss_pred EEecCchh-c--hhhHHHHHh-cchhhcC-cHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99987421 1 112222221 1111111 12346778999999963333467799999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 644 DEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 644 DEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||||+|||+.++..+.+.|+++ +.|||+||||++++..+|| +|++|++|+++. .|+++++
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~ 219 (241)
T PRK14250 156 DEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGD-----YTAFLNKGILVE-YAKTYDF 219 (241)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCC-----EEEEEeCCEEEE-eCCHHHH
Confidence 9999999999999999999875 4699999999999999995 999999999975 4666554
No 178
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-38 Score=326.95 Aligned_cols=225 Identities=22% Similarity=0.337 Sum_probs=173.9
Q ss_pred eEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHH
Q 048654 166 ITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 166 I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~ 238 (723)
|+++||+..|.. ..+++||||+|.+||++||||.||||||||.+.|+|+....+ ..|+|.|.++++...+...
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 789999999853 479999999999999999999999999999999999865222 2357888777765443321
Q ss_pred HHHHHHhhHHHHHHH-HHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCcc--c
Q 048654 239 IQAVVSAHEELVKLR-EEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTKE--M 313 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~~--~ 313 (723)
+. .++ ..++++ |+.... ..+...++..+.+.+...... ...+..+++.++|+.+||... .
T Consensus 82 ~~----------~iRG~~I~mIfQ~p~~s-----LnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~ 146 (316)
T COG0444 82 LR----------KIRGKEIAMIFQDPMTS-----LNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERR 146 (316)
T ss_pred HH----------hhcCceEEEEEcCchhh-----cCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 11 111 223333 222211 122345566666555432222 344567899999999999854 5
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEE
Q 048654 314 QGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIH 389 (723)
Q Consensus 314 ~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~ 389 (723)
.+.++++|||||||||+||.||+.+|+|||.||||++||...+..+.++|+++ +.|+|+||||+..+.++||||+|
T Consensus 147 ~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~V 226 (316)
T COG0444 147 LKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAV 226 (316)
T ss_pred HhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEE
Confidence 68999999999999999999999999999999999999999999998888754 67999999999999999999999
Q ss_pred EeCCEEEEecCChhhHH
Q 048654 390 LHDQKLHFYRGNFDDFE 406 (723)
Q Consensus 390 L~~G~i~~~~g~~~~~~ 406 (723)
|..|+|++. |+.+++.
T Consensus 227 MYaG~iVE~-g~~~~i~ 242 (316)
T COG0444 227 MYAGRIVEE-GPVEEIF 242 (316)
T ss_pred EECcEEEEe-CCHHHHh
Confidence 999999865 7766553
No 179
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.3e-37 Score=323.83 Aligned_cols=221 Identities=28% Similarity=0.334 Sum_probs=165.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCC---cEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPK---NIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~---~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++||+++|++..+|+|+||+|++|++++|+|+|||||||||++|+|+..|.|. .|+|.+.++.+......
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~---- 76 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKID---- 76 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccc----
Confidence 37899999999988999999999999999999999999999999999998765422 67887776654321000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHh-cCchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQI-LGSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... .. ..+.+++..... ... ........++.++++.+|+.. ...+++
T Consensus 77 -------~~~~~~~i~~v~q~~~~------~~-~tv~e~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 141 (247)
T TIGR00972 77 -------VVELRRRVGMVFQKPNP------FP-MSIYDNIAYGPR-LHGIKDKKELDEIVEESLKKAALWDEVKDRLHDS 141 (247)
T ss_pred -------hHHHHhheEEEecCccc------CC-CCHHHHHHhHHH-hcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCC
Confidence 01112233333322111 00 122232221111 111 122344567889999999962 334788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 142 ~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i 221 (247)
T TIGR00972 142 ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGEL 221 (247)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999875 37999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+.+++
T Consensus 222 ~~-~~~~~~~ 230 (247)
T TIGR00972 222 VE-YGPTEQI 230 (247)
T ss_pred EE-eCCHHHH
Confidence 64 4666554
No 180
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-38 Score=320.22 Aligned_cols=195 Identities=29% Similarity=0.404 Sum_probs=158.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIGRY 565 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig~~ 565 (723)
|+++|+++.|++. .+|+|+||+|.+| +++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 77 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYL 77 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEe
Confidence 4689999999753 5899999999999 99999999999999999999999999999998763 348899
Q ss_pred ccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEe
Q 048654 566 SQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLL 643 (723)
Q Consensus 566 ~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlL 643 (723)
+|+.. ..+++.++.... ..... .......+.+..+++.+||.... ++++.+|||||||||+|||||+.+|++|||
T Consensus 78 ~q~~~~~~~~tv~~~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llll 154 (211)
T cd03264 78 PQEFGVYPNFTVREFLDYI-AWLKG-IPSKEVKARVDEVLELVNLGDRA-KKKIGSLSGGMRRRVGIAQALVGDPSILIV 154 (211)
T ss_pred cCCCcccccCCHHHHHHHH-HHHhC-CCHHHHHHHHHHHHHHCCCHHHH-hCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 98742 222333332111 11111 10011234578899999997544 467799999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 644 DEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 644 DEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
||||+|||+.++..+.++|+++. .|||+||||++++..+|| ++++|++|+++.
T Consensus 155 DEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d-----~i~~l~~g~i~~ 209 (211)
T cd03264 155 DEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCN-----QVAVLNKGKLVF 209 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCC-----EEEEEECCEEEe
Confidence 99999999999999999999874 689999999999999985 999999999964
No 181
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.3e-38 Score=341.50 Aligned_cols=216 Identities=25% Similarity=0.342 Sum_probs=166.2
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++|++++|+++++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.++++......
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~~~~~~------- 72 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVSRLHAR------- 72 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCHH-------
Confidence 48999999999999999999999999999999999999999999999998654 566777777665422110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH---HhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL---QILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
...++++.+.... .....+.+++....... .........+++.++|+.+|+.. ..++++.+|
T Consensus 73 --------~r~i~~v~Q~~~l------~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~L 137 (353)
T PRK10851 73 --------DRKVGFVFQHYAL------FRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAH-LADRYPAQL 137 (353)
T ss_pred --------HCCEEEEecCccc------CCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCch-hhhCChhhC
Confidence 1112222221100 11123333333221110 01123345678999999999974 568999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||||||+|||||+.+|+||||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++.
T Consensus 138 SgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~ 217 (353)
T PRK10851 138 SGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQ 217 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999998888754 5799999999999999999999999999975
Q ss_pred ecCChhhH
Q 048654 398 YRGNFDDF 405 (723)
Q Consensus 398 ~~g~~~~~ 405 (723)
.|+++++
T Consensus 218 -~g~~~~i 224 (353)
T PRK10851 218 -AGTPDQV 224 (353)
T ss_pred -EcCHHHH
Confidence 4776655
No 182
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5.7e-38 Score=321.38 Aligned_cols=198 Identities=29% Similarity=0.383 Sum_probs=158.5
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~ 560 (723)
||+++|+++.|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 1 MIRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred CEEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 47899999999422 35899999999999999999999999999999999999999999987653 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
.++|++|... ...++.++... ..... ..........+.++++.+++.... ++++.+|||||||||+|||||+.+|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~-~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p 156 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAI-PLIIA-GASGDDIRRRVSAALDKVGLLDKA-KNFPIQLSGGEQQRVGIARAVVNKP 156 (222)
T ss_pred heEEEecCccccccccHHHHHHh-HHHhc-CCCHHHHHHHHHHHHHHcCChhhh-hCCchhCCHHHHHHHHHHHHHHcCC
Confidence 4789998742 12233332211 11111 110001223567899999997544 4667999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
++|||||||++||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~ 217 (222)
T PRK10908 157 AVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSY-----RMLTLSDGHLHG 217 (222)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEcc
Confidence 999999999999999999999999876 3689999999999999985 999999999863
No 183
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-38 Score=332.68 Aligned_cols=207 Identities=28% Similarity=0.409 Sum_probs=165.0
Q ss_pred CeEEEEEEEEEcCCC-cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------ee
Q 048654 494 PLLQLIEVSFSYPNR-EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~-~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ 561 (723)
++|+++||++.|++. ...+|+||||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13650 3 NIIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHK 82 (279)
T ss_pred ceEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhh
Confidence 479999999999742 235899999999999999999999999999999999999999999988763 24
Q ss_pred EEEEccccc---cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFV---DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|.+. ...++.++.. +..... ........+.+.++++.+||.+.. ++++.+|||||||||+|||||+.+|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~-~~~~~~-~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGq~qrv~lAral~~~p 159 (279)
T PRK13650 83 IGMVFQNPDNQFVGATVEDDVA-FGLENK-GIPHEEMKERVNEALELVGMQDFK-EREPARLSGGQKQRVAIAGAVAMRP 159 (279)
T ss_pred ceEEEcChHHhcccccHHHHHH-hhHHhC-CCCHHHHHHHHHHHHHHCCCHhHh-hCCcccCCHHHHHHHHHHHHHHcCC
Confidence 799999752 1223333321 111111 000001234578899999997544 4667999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+||||||||+|||+.++..+.++|+++ +.|||+||||++++. +|| +|++|++|+++. .|+++++.
T Consensus 160 ~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~d-----ri~~l~~G~i~~-~g~~~~~~ 228 (279)
T PRK13650 160 KIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSD-----RVLVMKNGQVES-TSTPRELF 228 (279)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCC-----EEEEEECCEEEE-ECCHHHHH
Confidence 999999999999999999999998875 459999999999994 784 999999999974 57877654
No 184
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=5.8e-38 Score=329.41 Aligned_cols=216 Identities=25% Similarity=0.398 Sum_probs=168.5
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC---cceEEECCc----------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT---EGEVRRSQK---------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~---~G~I~~~~~---------- 559 (723)
+++|+++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+++.
T Consensus 2 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~ 79 (262)
T PRK09984 2 QTIIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLAR 79 (262)
T ss_pred CcEEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccch
Confidence 358999999999975 35899999999999999999999999999999999999986 499987663
Q ss_pred ------eeEEEEccccc--cccCccccHHHHHHhhCC------CCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHH
Q 048654 560 ------LRIGRYSQHFV--DLLTMEETPVSYLLRLHP------DQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQK 625 (723)
Q Consensus 560 ------~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqk 625 (723)
..++|++|... ..+++.++.........+ ..........+.++++.+|+.... ++++.+||||||
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~ 158 (262)
T PRK09984 80 DIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFA-HQRVSTLSGGQQ 158 (262)
T ss_pred hHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHH-hCCccccCHHHH
Confidence 13789998642 122332222110000000 000011234678899999997533 467799999999
Q ss_pred HHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 626 ARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 626 qRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d-----~i~~l~~g~i~- 232 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCE-----RIVALRQGHVF- 232 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEE-
Confidence 9999999999999999999999999999999999999876 3589999999999999995 99999999996
Q ss_pred cCCCHHHHHHHHHHHH
Q 048654 702 FPGTFEEYKEDLQREI 717 (723)
Q Consensus 702 ~~g~~~~~~~~~~~~~ 717 (723)
..|+++++.+....++
T Consensus 233 ~~g~~~~~~~~~~~~~ 248 (262)
T PRK09984 233 YDGSSQQFDNERFDHL 248 (262)
T ss_pred EeCCHHHhccHHHHHH
Confidence 5688888744333333
No 185
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=322.87 Aligned_cols=220 Identities=28% Similarity=0.357 Sum_probs=161.9
Q ss_pred eEEEeEEEEeCC-eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 166 ITIDNFSVAARG-KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 166 I~l~nls~~y~~-~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
|+++||+++|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.......
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~------ 72 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINKLKGKA------ 72 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccccCHhH------
Confidence 468999999987 8899999999999999999999999999999999998654 4567777665543221100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHH-------HHHhcCchHHHHHHHHHHHhCCCCccccCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYE-------KLQILGSDAAEAQASKILAGLGFTKEMQGRP 317 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 317 (723)
...++..++++.+.... .....+.+++..... .+..........++.++++.+|+.. ..+++
T Consensus 73 ----~~~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~ 141 (241)
T cd03256 73 ----LRQLRRQIGMIFQQFNL------IERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-KAYQR 141 (241)
T ss_pred ----HHHHHhccEEEcccCcc------cccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-hhCCC
Confidence 01122233333221111 001122222211100 0001112234567889999999964 45789
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 142 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G 221 (241)
T cd03256 142 ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDG 221 (241)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998764 579999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++. .|+++++
T Consensus 222 ~i~~-~~~~~~~ 232 (241)
T cd03256 222 RIVF-DGPPAEL 232 (241)
T ss_pred EEEe-ecCHHHh
Confidence 9964 4766554
No 186
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=326.60 Aligned_cols=207 Identities=23% Similarity=0.392 Sum_probs=165.8
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRI 562 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~i 562 (723)
+|+++||++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 7899999999975 35899999999999999999999999999999999999999999988762 248
Q ss_pred EEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 563 GRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 563 g~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|++|... ..+++.++.... ...............+.++++.+|+.... ++++.+|||||+|||+|||||+.+|++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~l 158 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAV-LQIRDDLSAEQREDRANELMEEFHIEHLR-DSMGQSLSGGERRRVEIARALAANPKF 158 (241)
T ss_pred EEeccCCcccccCcHHHHHhhh-hhcccccCHHHHHHHHHHHHHHcCCHHHh-hcchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99998742 122333332111 11111000011234577899999997543 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+|| +|++|++|+++. .|+++++.+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d-----~v~~l~~G~i~~-~~~~~~~~~ 226 (241)
T PRK10895 159 ILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCE-----RAYIVSQGHLIA-HGTPTEILQ 226 (241)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcC-----EEEEEeCCeEEe-eCCHHHHhc
Confidence 9999999999999999998888765 4689999999999999995 999999999974 688877643
No 187
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-38 Score=343.36 Aligned_cols=215 Identities=23% Similarity=0.330 Sum_probs=165.2
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+..+......
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i~~~~~~------- 73 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRMNDVPPA------- 73 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECCCCCHh-------
Confidence 58999999999999999999999999999999999999999999999998754 566777766655321110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
...++++.+.... .....+.+++..... ...........++.++++.+||.. ..++++.+||||
T Consensus 74 --------~~~i~~v~Q~~~l------~~~~tv~eni~~~~~-~~~~~~~~~~~~~~~~l~~lgL~~-~~~~~~~~LSgG 137 (369)
T PRK11000 74 --------ERGVGMVFQSYAL------YPHLSVAENMSFGLK-LAGAKKEEINQRVNQVAEVLQLAH-LLDRKPKALSGG 137 (369)
T ss_pred --------HCCEEEEeCCccc------CCCCCHHHHHHhHHh-hcCCCHHHHHHHHHHHHHHcCChh-hhcCChhhCCHH
Confidence 0112222221100 111223333332211 111223345578899999999974 457999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++. .|
T Consensus 138 q~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~-~g 216 (369)
T PRK11000 138 QRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQ-VG 216 (369)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-Ec
Confidence 999999999999999999999999999999999998888754 6799999999999999999999999999974 47
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+++++
T Consensus 217 ~~~~i 221 (369)
T PRK11000 217 KPLEL 221 (369)
T ss_pred CHHHH
Confidence 76554
No 188
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=8.6e-38 Score=321.29 Aligned_cols=200 Identities=29% Similarity=0.394 Sum_probs=159.5
Q ss_pred CCeEEEEEEEEEcCCCc--ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------
Q 048654 493 PPLLQLIEVSFSYPNRE--DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~--~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------- 559 (723)
+++|+++||++.|++.. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 4 ~~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 83 (228)
T PRK10584 4 ENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARA 83 (228)
T ss_pred CceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHH
Confidence 46899999999997532 24899999999999999999999999999999999999999999987652
Q ss_pred ----eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 560 ----~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
..++|++|... ..+++.++.... .... ........+.+.++++.+++.... .+++..|||||||||+||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~~tv~~~l~~~-~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Ge~qrl~la~a 160 (228)
T PRK10584 84 KLRAKHVGFVFQSFMLIPTLNALENVELP-ALLR-GESSRQSRNGAKALLEQLGLGKRL-DHLPAQLSGGEQQRVALARA 160 (228)
T ss_pred HHHhheEEEEEcccccCCCcCHHHHHHHH-HHhc-CCCHHHHHHHHHHHHHHcCCHhHh-hCChhhCCHHHHHHHHHHHH
Confidence 24889998742 222333332111 1111 110011235678899999997544 45678999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++. .| |++++|++|+++.
T Consensus 161 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~-----d~i~~l~~g~i~~ 226 (228)
T PRK10584 161 FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAA-RC-----DRRLRLVNGQLQE 226 (228)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hC-----CEEEEEECCEEEe
Confidence 99999999999999999999999999999765 458999999999985 47 4999999999863
No 189
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-38 Score=327.62 Aligned_cols=210 Identities=28% Similarity=0.422 Sum_probs=166.3
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------e
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------L 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~ 560 (723)
+++|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (255)
T PRK11300 3 QPLLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARM 80 (255)
T ss_pred CceEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhc
Confidence 458999999999975 35899999999999999999999999999999999999999999998763 1
Q ss_pred eEEEEccccc--cccCccccHHHHHH---------hhCC--CCCCC--cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHH
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLL---------RLHP--DQEGL--SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQK 625 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~---------~~~~--~~~~~--~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqk 625 (723)
.++|++|... ..+++.++...... ..+. ..... .....+..+++.+|+.... ++++.+||||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~ 159 (255)
T PRK11300 81 GVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHA-NRQAGNLAYGQQ 159 (255)
T ss_pred CeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhh-hCChhhCCHHHH
Confidence 3678888642 22333333211100 0000 00000 1124567889999997544 467899999999
Q ss_pred HHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 626 ARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 626 qRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||+|||||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~g~i~- 233 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISD-----RIYVVNQGTPL- 233 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCeEE-
Confidence 9999999999999999999999999999999999999765 4689999999999999995 99999999997
Q ss_pred cCCCHHHHHH
Q 048654 702 FPGTFEEYKE 711 (723)
Q Consensus 702 ~~g~~~~~~~ 711 (723)
+.|+++++..
T Consensus 234 ~~~~~~~~~~ 243 (255)
T PRK11300 234 ANGTPEEIRN 243 (255)
T ss_pred ecCCHHHHhh
Confidence 4678777643
No 190
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.6e-38 Score=323.68 Aligned_cols=218 Identities=25% Similarity=0.347 Sum_probs=160.9
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+..+........
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~------ 72 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDITGLPPHEI------ 72 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECCCCCHHHH------
Confidence 4689999999988999999999999999999999999999999999998654 45677776665432221110
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc---------CchHHHHHHHHHHHhCCCCccccCC
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL---------GSDAAEAQASKILAGLGFTKEMQGR 316 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~L~~lgl~~~~~~~ 316 (723)
.+..++++.+.... .....+.+++.......... .......++.++++.+|+.. ..++
T Consensus 73 ------~~~~i~~v~q~~~l------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~ 139 (236)
T cd03219 73 ------ARLGIGRTFQIPRL------FPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-LADR 139 (236)
T ss_pred ------HhcCEEEEeccccc------ccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-hhhC
Confidence 00112222111000 00112222222111110000 12234567889999999974 4578
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 140 ~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 140 PAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999764 579999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++ +.|+.+++
T Consensus 220 ~i~-~~~~~~~~ 230 (236)
T cd03219 220 RVI-AEGTPDEV 230 (236)
T ss_pred EEE-eecCHHHh
Confidence 996 44665544
No 191
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=331.64 Aligned_cols=224 Identities=22% Similarity=0.250 Sum_probs=165.8
Q ss_pred ceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 165 DITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
+|+++|++++|+. +.+|+||||+|.+|++++|+|+||||||||+++|+|++.| ..|.|.+.+..+.......
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~- 77 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVSSTSKQK- 77 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECccccccc-
Confidence 4899999999973 2599999999999999999999999999999999998654 5567777666543211000
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
....++..++++.+.... ......+.+++....... .....+...++.++|+.+|+.....++++.
T Consensus 78 --------~~~~~~~~ig~v~q~~~~-----~l~~~tv~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~ 143 (288)
T PRK13643 78 --------EIKPVRKKVGVVFQFPES-----QLFEETVLKDVAFGPQNF-GIPKEKAEKIAAEKLEMVGLADEFWEKSPF 143 (288)
T ss_pred --------cHHHHHhhEEEEecCcch-----hcccchHHHHHHhHHHHc-CCCHHHHHHHHHHHHHHcCCChhhccCCcc
Confidence 001122333333221100 000112333332221111 122344567889999999996445579999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
+|||||||||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++..+||+|++|++|+++
T Consensus 144 ~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~ 223 (288)
T PRK13643 144 ELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHII 223 (288)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999988754 579999999999999999999999999997
Q ss_pred EecCChhhHH
Q 048654 397 FYRGNFDDFE 406 (723)
Q Consensus 397 ~~~g~~~~~~ 406 (723)
+.|+++++.
T Consensus 224 -~~g~~~~~~ 232 (288)
T PRK13643 224 -SCGTPSDVF 232 (288)
T ss_pred -EECCHHHHH
Confidence 458777654
No 192
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-38 Score=332.20 Aligned_cols=208 Identities=28% Similarity=0.383 Sum_probs=166.2
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------ee
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LR 561 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ 561 (723)
.++|+++||++.|++...++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13635 3 EEIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQ 82 (279)
T ss_pred CceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhh
Confidence 4689999999999753345899999999999999999999999999999999999999999998763 24
Q ss_pred EEEEccccc---cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFV---DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|.+. ...++.++.. +...... .........+..++..+||.... .+++.+|||||||||+|||||+.+|
T Consensus 83 i~~~~q~~~~~~~~~tv~enl~-~~~~~~~-~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 83 VGMVFQNPDNQFVGATVQDDVA-FGLENIG-VPREEMVERVDQALRQVGMEDFL-NREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred eEEEEeCHHHhcccccHHHHHh-hhHhhCC-CCHHHHHHHHHHHHHHcCChhhh-hCCcccCCHHHHHHHHHHHHHHcCC
Confidence 899999752 1223333321 1111110 00001234578899999997654 4667999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+||||||||+|||+.++..|.++|.++ +.|||+||||++++. .| |+|++|++|+++ +.|+++++.
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~-~~-----d~i~~l~~G~i~-~~g~~~~~~ 228 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAA-QA-----DRVIVMNKGEIL-EEGTPEEIF 228 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-cC-----CEEEEEECCEEE-EECCHHHHh
Confidence 999999999999999999999999876 358999999999997 48 499999999997 457777654
No 193
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-38 Score=324.33 Aligned_cols=215 Identities=26% Similarity=0.336 Sum_probs=161.0
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++||++.|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+.++......
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~------- 72 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDATDVPVQ------- 72 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCcCCcc-------
Confidence 48999999999999999999999999999999999999999999999998654 566777766554321100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc----CchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL----GSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
+..++++.+.... .....+.+++..... .... .......++.++++.+|+.. ..++++.+
T Consensus 73 --------~~~i~~v~q~~~~------~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~ 136 (239)
T cd03296 73 --------ERNVGFVFQHYAL------FRHMTVFDNVAFGLR-VKPRSERPPEAEIRAKVHELLKLVQLDW-LADRYPAQ 136 (239)
T ss_pred --------ccceEEEecCCcc------cCCCCHHHHHhhhhh-hccccccCCHHHHHHHHHHHHHHcCChh-hhhcChhh
Confidence 0111222111000 001122222221111 0001 12233456788999999964 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||||||+|||||+.+|+||||||||++||+.++.++.++|.++ +.|||+||||++++..+||+|++|++|+++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIE 216 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 9999999999999999999999999999999999999999998764 579999999999999999999999999996
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+.+++
T Consensus 217 ~-~~~~~~~ 224 (239)
T cd03296 217 Q-VGTPDEV 224 (239)
T ss_pred E-ecCHHHH
Confidence 4 4665544
No 194
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-38 Score=331.33 Aligned_cols=208 Identities=30% Similarity=0.423 Sum_probs=166.6
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
++|+++||++.|++. ..+|+||||+|.+||+++|+|+||||||||+++|+|+++|++|+|++++. ..+
T Consensus 2 ~~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 2 HLIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred ceEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 478999999999643 34899999999999999999999999999999999999999999998763 148
Q ss_pred EEEcccccc---ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 563 GRYSQHFVD---LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 563 g~~~q~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
+|++|.+.. ..++.++.. +..... ........+.+.++++.+||.... ++++..|||||||||+|||||+.+|+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~-~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrl~laraL~~~p~ 157 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIA-FGPINL-GLDEETVAHRVSSALHMLGLEELR-DRVPHHLSGGEKKRVAIAGVIAMEPQ 157 (277)
T ss_pred EEEecCcccccccccHHHHHH-hHHHHc-CCCHHHHHHHHHHHHHHCCChhHh-cCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 999987521 123322221 111111 110001234578899999997544 46679999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||||||+|||+.+...+.++|+++ +.|||++|||++++..+|| ||++|++|+++ +.|+++++.+
T Consensus 158 llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~d-----rv~~l~~G~i~-~~g~~~~~~~ 227 (277)
T PRK13652 158 VLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMAD-----YIYVMDKGRIV-AYGTVEEIFL 227 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEEECCeEE-EECCHHHHhc
Confidence 99999999999999999999999875 4689999999999999995 99999999997 4588887643
No 195
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5.8e-38 Score=321.04 Aligned_cols=202 Identities=28% Similarity=0.413 Sum_probs=160.6
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRIG 563 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ig 563 (723)
|+++||++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 4689999999753 5899999999999999999999999999999999999999999987652 2488
Q ss_pred EEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhC-CCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 564 RYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKF-GLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 564 ~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
|++|... ..+++.++.. +...... .......+..+++.+ ++.... ++++.+|||||||||+|||||+.+|++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~-~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~l 153 (222)
T cd03224 79 YVPEGRRIFPELTVEENLL-LGAYARR---RAKRKARLERVYELFPRLKERR-KQLAGTLSGGEQQMLAIARALMSRPKL 153 (222)
T ss_pred EeccccccCCCCcHHHHHH-HHhhhcC---chhHHHHHHHHHHHHHhhhhhh-hCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9998742 2223333221 1111111 111234466778887 465433 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 220 (222)
T cd03224 154 LLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIAD-----RAYVLERGRVVL-EGTAAELL 220 (222)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcc-----EEEEeeCCeEEE-eCCHHHHh
Confidence 9999999999999999999999876 3599999999999999995 999999999974 57766543
No 196
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.8e-38 Score=320.27 Aligned_cols=210 Identities=28% Similarity=0.372 Sum_probs=154.7
Q ss_pred eEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 166 ITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 166 I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
|+++||+++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.........
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~~~- 77 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDISKLSEKELA- 77 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehhhcchhHHH-
Confidence 578999999986 7899999999999999999999999999999999998654 566777766554321110000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
...+..++++.+.... .....+.+++.... ...........+++.++++.+|+... .++++.+|
T Consensus 78 --------~~~~~~i~~~~q~~~~------~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~L 141 (218)
T cd03255 78 --------AFRRRHIGFVFQSFNL------LPDLTALENVELPL-LLAGVPKKERRERAEELLERVGLGDR-LNHYPSEL 141 (218)
T ss_pred --------HHHhhcEEEEeecccc------CCCCcHHHHHHHHH-hhcCCCHHHHHHHHHHHHHHcCCchh-hhcChhhc
Confidence 0011223333221110 00112223322211 11111222345678899999999743 47889999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++. +||+|++|++|++
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 999999999999999999999999999999999999999999864 579999999999997 9999999999974
No 197
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8e-38 Score=361.41 Aligned_cols=212 Identities=29% Similarity=0.465 Sum_probs=174.3
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccc-
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFV- 570 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~- 570 (723)
.+++|+++||++.|++. ..+|+||||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.....+||++|++.
T Consensus 3 ~~~~l~i~~l~~~y~~~-~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~ 81 (556)
T PRK11819 3 AQYIYTMNRVSKVVPPK-KQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQL 81 (556)
T ss_pred ccEEEEEeeEEEEeCCC-CeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCC
Confidence 35799999999999722 3589999999999999999999999999999999999999999999877678999999742
Q ss_pred -cccCccccHHHHHHhh-------------CCCC---------------------CCCcHHHHHHHHHHhCCCCCCCCcC
Q 048654 571 -DLLTMEETPVSYLLRL-------------HPDQ---------------------EGLSKQEAVRAKLGKFGLPSHNHLT 615 (723)
Q Consensus 571 -~~~~~~~~~~~~~~~~-------------~~~~---------------------~~~~~~~~~~~~L~~~gl~~~~~~~ 615 (723)
+.+++.++........ .... ........+..+|..+||.. .++
T Consensus 82 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--~~~ 159 (556)
T PRK11819 82 DPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP--WDA 159 (556)
T ss_pred CCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc--ccC
Confidence 2334444432111000 0000 00011345778899999953 357
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEE
Q 048654 616 PIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVE 695 (723)
Q Consensus 616 ~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~ 695 (723)
++.+|||||||||+|||+|+.+|+||||||||||||+.++..+.+.|+++.+|||+||||++++..+|| +|++|+
T Consensus 160 ~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d-----~i~~l~ 234 (556)
T PRK11819 160 KVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAG-----WILELD 234 (556)
T ss_pred chhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcC-----eEEEEe
Confidence 889999999999999999999999999999999999999999999999998899999999999999995 999999
Q ss_pred CCeEEecCCCHHHHHH
Q 048654 696 NGTVSRFPGTFEEYKE 711 (723)
Q Consensus 696 ~G~i~~~~g~~~~~~~ 711 (723)
+|+++.+.|++++|.+
T Consensus 235 ~g~i~~~~g~~~~~~~ 250 (556)
T PRK11819 235 RGRGIPWEGNYSSWLE 250 (556)
T ss_pred CCEEEEecCCHHHHHH
Confidence 9999778899988754
No 198
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-39 Score=313.40 Aligned_cols=209 Identities=27% Similarity=0.439 Sum_probs=173.6
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------ee
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ 561 (723)
.+|.++|+.++|+.+ .++++|||+|++||+|||+|||||||||.+.+++|+.+|++|+|.+++. ..
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 468899999999864 5899999999999999999999999999999999999999999998652 35
Q ss_pred EEEEcccc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQHF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
+||++|.. +..+++.+|....+-....+........++..+|+.|+|.+.. +++..+||||||+||.|||||+.+|+
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr-~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLR-DSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHh-cCcccccccchHHHHHHHHHHhcCCC
Confidence 89999974 4557777775433211111211111233467999999998654 46778999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
+||||||++|+||.+...+.+++..+ +.+|+++-|+..+...+|| |.|+|.+|+|. +.|+++++.+
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~d-----RaYIi~~G~vl-a~G~p~ei~~ 228 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICD-----RAYIISDGKVL-AEGSPEEIVN 228 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhh-----eEEEEecCeEE-ecCCHHHHhc
Confidence 99999999999999988888887766 4589999999999999995 99999999997 6799988654
No 199
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-38 Score=338.20 Aligned_cols=211 Identities=19% Similarity=0.265 Sum_probs=165.4
Q ss_pred CeEEEEEEEEEcCC--CcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC----CCcceEEECCc--------
Q 048654 494 PLLQLIEVSFSYPN--REDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS----PTEGEVRRSQK-------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~--~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~----p~~G~I~~~~~-------- 559 (723)
++|+++||++.|+. ....+|+||||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 2 ~~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (330)
T PRK15093 2 PLLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPR 81 (330)
T ss_pred CeEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHH
Confidence 47999999999953 12358999999999999999999999999999999999997 58999998763
Q ss_pred -------eeEEEEcccccccc----CccccHHHHHHhh-CCC-C-CC-CcHHHHHHHHHHhCCCCCC--CCcCCCCCCCH
Q 048654 560 -------LRIGRYSQHFVDLL----TMEETPVSYLLRL-HPD-Q-EG-LSKQEAVRAKLGKFGLPSH--NHLTPIAKLSG 622 (723)
Q Consensus 560 -------~~ig~~~q~~~~~~----~~~~~~~~~~~~~-~~~-~-~~-~~~~~~~~~~L~~~gl~~~--~~~~~i~~LSG 622 (723)
..++|++|+....+ ++.++....+... ... . .. ......+.++|+.+||... ..++.+.+|||
T Consensus 82 ~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSg 161 (330)
T PRK15093 82 ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTE 161 (330)
T ss_pred HHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCH
Confidence 14899999754322 2222222111111 000 0 00 0123467889999999742 12356689999
Q ss_pred HHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCe
Q 048654 623 GQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGT 698 (723)
Q Consensus 623 GqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~ 698 (723)
||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||+.++..+|| +|++|++|+
T Consensus 162 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~d-----ri~vm~~G~ 236 (330)
T PRK15093 162 GECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWAD-----KINVLYCGQ 236 (330)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC-----EEEEEECCE
Confidence 9999999999999999999999999999999999999999875 4689999999999999995 999999999
Q ss_pred EEecCCCHHHHH
Q 048654 699 VSRFPGTFEEYK 710 (723)
Q Consensus 699 i~~~~g~~~~~~ 710 (723)
|++ .|+.+++.
T Consensus 237 ive-~g~~~~i~ 247 (330)
T PRK15093 237 TVE-TAPSKELV 247 (330)
T ss_pred EEE-ECCHHHHH
Confidence 985 47776653
No 200
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-38 Score=324.68 Aligned_cols=206 Identities=26% Similarity=0.383 Sum_probs=164.4
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++||++.|++. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4689999999752 34899999999999999999999999999999999999999999988763 24789
Q ss_pred Eccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC-CCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 565 YSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS-HNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 565 ~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
++|... ..+++.++... ...... .........+.++++.+++.. ....+++.+|||||+|||+|||||+.+|+||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~-~~~~~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 157 (242)
T cd03295 80 VIQQIGLFPHMTVEENIAL-VPKLLK-WPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLL 157 (242)
T ss_pred EccCccccCCCcHHHHHHH-HHHHcC-CCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 998642 22333333221 111111 000012345778999999974 2334677999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||||||+|||+.++..+.++|.++ +.|||+||||.+++..+|| +|++|++|+++. .|+++++.
T Consensus 158 llDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 224 (242)
T cd03295 158 LMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLAD-----RIAIMKNGEIVQ-VGTPDEIL 224 (242)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCC-----EEEEEECCEEEE-ecCHHHHH
Confidence 999999999999999999999876 3589999999999999995 999999999974 47777654
No 201
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9e-38 Score=317.60 Aligned_cols=210 Identities=25% Similarity=0.393 Sum_probs=157.2
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++++|+++||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.+..+......
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~-------- 70 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTDDKKN-------- 70 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccchh--------
Confidence 4789999999989999999999999999999999999999999999998654 456676666554211000
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
...++..++++.+.... .....+.+++.................++.++++.+|+.. ..++++.+|||||
T Consensus 71 ---~~~~~~~i~~~~q~~~~------~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 140 (213)
T cd03262 71 ---INELRQKVGMVFQQFNL------FPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLAD-KADAYPAQLSGGQ 140 (213)
T ss_pred ---HHHHHhcceEEeccccc------CCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHh-HhhhCccccCHHH
Confidence 01122233333221110 0011222332221111111222344567889999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||++|||++++..+||+|++|++|++
T Consensus 141 ~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 141 QQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999999865 57999999999999999999999999874
No 202
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1e-37 Score=323.77 Aligned_cols=221 Identities=25% Similarity=0.359 Sum_probs=162.5
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++||++.|+ ++++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.+..+......
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~------ 72 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDITKLRGK------ 72 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhhhCCHH------
Confidence 378999999998 78899999999999999999999999999999999998654 456777666544321110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHH-------HHHhcCchHHHHHHHHHHHhCCCCccccCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYE-------KLQILGSDAAEAQASKILAGLGFTKEMQGR 316 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~ 316 (723)
....++..++++.+.... .....+.+++..... .+..........++.++++.+|+.. ..++
T Consensus 73 ----~~~~~~~~i~~v~q~~~~------~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~ 141 (243)
T TIGR02315 73 ----KLRKLRRRIGMIFQHYNL------IERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLAD-KAYQ 141 (243)
T ss_pred ----HHHHHHhheEEEcCCCcc------cccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHh-hhcC
Confidence 001122333333221110 001122222211000 0000111234567889999999964 4578
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++.++||+|++|++
T Consensus 142 ~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 142 RADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKA 221 (243)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 99999999999999999999999999999999999999999999998764 57999999999999999999999999
Q ss_pred CEEEEecCChhhH
Q 048654 393 QKLHFYRGNFDDF 405 (723)
Q Consensus 393 G~i~~~~g~~~~~ 405 (723)
|+++ +.|+++++
T Consensus 222 G~i~-~~~~~~~~ 233 (243)
T TIGR02315 222 GEIV-FDGAPSEL 233 (243)
T ss_pred CEEE-ecCCHHHh
Confidence 9997 45766554
No 203
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=312.97 Aligned_cols=208 Identities=28% Similarity=0.462 Sum_probs=171.6
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------ee
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ 561 (723)
+||+++||+..|+. ..+|++|||++.+||+++|+|+||+||||||++|+|+.+|.+|+|.+.++ ..
T Consensus 2 ~mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 2 PMLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred CceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 58999999999986 45899999999999999999999999999999999999999999998874 35
Q ss_pred EEEEccc--cccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQH--FVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
++|+||. .+..+++.+|...... ...... .....+..+.+.|---....+++.++|||||||.++|||||+.+|+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~-~~~~~~--~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAY-ARRDKE--AQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhh-cccccc--cccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 8999984 5667888777542211 111100 0111255667777532233456789999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcC---c-eEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEFT---G-GVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~~---~-tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
+|||||||.||-|.-...|.++|++++ + ||++|.++..++.+++| |.|||++|+|+ +.|+.+++.+.
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaD-----r~yvle~Griv-~~G~~~eL~~~ 227 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIAD-----RGYVLENGRIV-LSGTAAELLAD 227 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhC-----EEEEEeCCEEE-EecCHHHHhcC
Confidence 999999999999999999999998875 3 89999999999999995 99999999997 68999887654
No 204
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-38 Score=326.05 Aligned_cols=209 Identities=25% Similarity=0.345 Sum_probs=164.8
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~-------- 559 (723)
+|+|+++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|++. |++|+|.+++.
T Consensus 4 ~~~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 4 PPKMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred CcEEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 578999999999975 358999999999999999999999999999999999974 58999987652
Q ss_pred -----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|..... .++.++... ..............+.+..+++.+++... ...+++.+|||||||||+|
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 160 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAY-GLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCI 160 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHH-HHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHH
Confidence 2489999874211 123222211 11111100000123457788999998531 2345678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+|+. .|++++
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d-----~v~~l~~G~i~~-~g~~~~ 234 (253)
T PRK14242 161 ARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSD-----VTAFFYMGKLIE-VGPTEQ 234 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCC-----EEEEEECCEEEE-eCCHHH
Confidence 999999999999999999999999999999999874 589999999999999995 999999999974 578777
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 235 ~~ 236 (253)
T PRK14242 235 IF 236 (253)
T ss_pred HH
Confidence 64
No 205
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.7e-38 Score=319.87 Aligned_cols=195 Identities=30% Similarity=0.452 Sum_probs=157.0
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------------ee
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------LR 561 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------~~ 561 (723)
|+++|+++.|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4689999999643 35899999999999999999999999999999999999999999987653 14
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
++|++|... ..+++.++.... ..... .......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|+
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~ 156 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFA-LEVTG-VPPREIRKRVPAALELVGLSHKH-RALPAELSGGEQQRVAIARAIVNSPT 156 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHH-HHHcC-CCHHHHHHHHHHHHHHcCCHHHh-hCChhhcCHHHHHHHHHHHHHHcCCC
Confidence 789998642 223333332211 11111 00001234577899999997544 45678999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
||||||||+|||+.++..+.+.|+++ +.|||+||||.+++..+|| ++++|++|++
T Consensus 157 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d-----~i~~l~~G~~ 214 (214)
T cd03292 157 ILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRH-----RVIALERGKL 214 (214)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCcC
Confidence 99999999999999999999999886 3689999999999999995 9999999974
No 206
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-37 Score=336.49 Aligned_cols=212 Identities=22% Similarity=0.373 Sum_probs=167.7
Q ss_pred CCCeEEEEEEEEEcCC--CcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC---cceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPN--REDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT---EGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~--~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~---~G~I~~~~~------- 559 (723)
..++|+++||++.|+. +...+|+||||+|.+||+++|+|+||||||||+++|+|+++|. +|+|.+++.
T Consensus 9 ~~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~ 88 (330)
T PRK09473 9 ADALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPE 88 (330)
T ss_pred CCceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCH
Confidence 3578999999999953 2235899999999999999999999999999999999999996 999988763
Q ss_pred --------eeEEEEccccccc----cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC--CCcCCCCCCCHHHH
Q 048654 560 --------LRIGRYSQHFVDL----LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH--NHLTPIAKLSGGQK 625 (723)
Q Consensus 560 --------~~ig~~~q~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~--~~~~~i~~LSGGqk 625 (723)
..++|++|+.... +++.++.... +..+...........+.++|+.+||... ...+.+.+|||||+
T Consensus 89 ~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~-~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 89 KELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV-LMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHH
Confidence 1589999985322 2333322221 1121111000123457788999999742 12346689999999
Q ss_pred HHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 626 ARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 626 qRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||+|||||+.+|+||||||||++||+.++..|.++|.++ +.|||+||||+.++..+|| +|++|++|+|++
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~D-----ri~vm~~G~ive 242 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICD-----KVLVMYAGRTME 242 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCC-----EEEEEECCEEEE
Confidence 9999999999999999999999999999999999998776 4589999999999999995 999999999986
Q ss_pred cCCCHHHHH
Q 048654 702 FPGTFEEYK 710 (723)
Q Consensus 702 ~~g~~~~~~ 710 (723)
.|+.+++.
T Consensus 243 -~g~~~~i~ 250 (330)
T PRK09473 243 -YGNARDVF 250 (330)
T ss_pred -ECCHHHHH
Confidence 47776654
No 207
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=330.29 Aligned_cols=222 Identities=21% Similarity=0.296 Sum_probs=165.1
Q ss_pred ceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 165 DITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
.|+++||++.|++ +++|+||||+|.+|+++||+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~- 78 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDITDKKVKL- 78 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECCCcCccH-
Confidence 3899999999974 4799999999999999999999999999999999998654 5567777666553211100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc-cccCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK-EMQGRPT 318 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~-~~~~~~~ 318 (723)
..++..++++.+.... ......+.+++..... ...+...+...++.++++.+||.. ...++++
T Consensus 79 ----------~~~~~~ig~v~q~~~~-----~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 79 ----------SDIRKKVGLVFQYPEY-----QLFEETIEKDIAFGPI-NLGLSEEEIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ----------HHHhhceEEEecCchh-----ccccccHHHHHHhHHH-HCCCCHHHHHHHHHHHHHHcCCCchhhccCCc
Confidence 0112223333221100 0001122333322111 111233445567899999999961 3457999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 143 ~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~ 222 (287)
T PRK13637 143 FELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGK 222 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998754 5799999999999999999999999999
Q ss_pred EEEecCChhhHH
Q 048654 395 LHFYRGNFDDFE 406 (723)
Q Consensus 395 i~~~~g~~~~~~ 406 (723)
++. .|+.+++.
T Consensus 223 i~~-~g~~~~~~ 233 (287)
T PRK13637 223 CEL-QGTPREVF 233 (287)
T ss_pred EEE-ECCHHHHH
Confidence 974 57766653
No 208
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=323.67 Aligned_cols=221 Identities=24% Similarity=0.283 Sum_probs=166.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
+.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+..+. |..|+|.+.+..+......
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~--- 78 (250)
T PRK14247 2 NKIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVI--- 78 (250)
T ss_pred ceEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHH---
Confidence 3589999999999889999999999999999999999999999999999987653 4578888877655321111
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc--CchHHHHHHHHHHHhCCCCc---cccC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL--GSDAAEAQASKILAGLGFTK---EMQG 315 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~ 315 (723)
.++..++++.+.... .....+.+++..... .... ......+++.++++.+|+.. ...+
T Consensus 79 ----------~~~~~i~~v~q~~~~------~~~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14247 79 ----------ELRRRVQMVFQIPNP------IPNLSIFENVALGLK-LNRLVKSKKELQERVRWALEKAQLWDEVKDRLD 141 (250)
T ss_pred ----------HHhccEEEEeccCcc------CCCCcHHHHHHHHHH-hccccCCHHHHHHHHHHHHHHcCCCcchhhhhc
Confidence 112223333221110 011122333322111 1111 12334567889999999853 2357
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 142 ~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 221 (250)
T PRK14247 142 APAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKG 221 (250)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 889999999999999999999999999999999999999999999999875 579999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
++.. .|+.+++
T Consensus 222 ~i~~-~g~~~~~ 232 (250)
T PRK14247 222 QIVE-WGPTREV 232 (250)
T ss_pred eEEE-ECCHHHH
Confidence 9964 4776654
No 209
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=330.73 Aligned_cols=223 Identities=23% Similarity=0.290 Sum_probs=165.0
Q ss_pred ceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCC-ChHH
Q 048654 165 DITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGD-DRSA 238 (723)
Q Consensus 165 ~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~-~~~~ 238 (723)
.|+++||+++|++ .++|+||||+|++|++++|+|+||||||||+++|+|+..| ..|+|.+.++.+... ....
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~ 79 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVITAGKKNKK 79 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECccccccch
Confidence 3899999999974 5799999999999999999999999999999999998654 566777777665321 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
...++..++++.+.... ......+.+++...... ..........++.++|+.+||.....++++
T Consensus 80 ----------~~~~~~~ig~v~q~~~~-----~l~~~tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~ 143 (290)
T PRK13634 80 ----------LKPLRKKVGIVFQFPEH-----QLFEETVEKDICFGPMN-FGVSEEDAKQKAREMIELVGLPEELLARSP 143 (290)
T ss_pred ----------HHHHHhhEEEEeeCchh-----hhhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHCCCChhhhhCCc
Confidence 00112223333221000 00011223333211111 112233445678999999999644557899
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||||++|++|+
T Consensus 144 ~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~ 223 (290)
T PRK13634 144 FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGT 223 (290)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999988754 6799999999999999999999999999
Q ss_pred EEEecCChhhHH
Q 048654 395 LHFYRGNFDDFE 406 (723)
Q Consensus 395 i~~~~g~~~~~~ 406 (723)
++ +.|+.+++.
T Consensus 224 i~-~~g~~~~~~ 234 (290)
T PRK13634 224 VF-LQGTPREIF 234 (290)
T ss_pred EE-EECCHHHHh
Confidence 96 457766653
No 210
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=329.78 Aligned_cols=224 Identities=21% Similarity=0.312 Sum_probs=165.8
Q ss_pred ceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 165 DITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
.|+++||+++|++ +++|+||||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+.++......
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~~~~~~-- 77 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITITHKTKD-- 77 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECcccccc--
Confidence 4899999999964 4699999999999999999999999999999999998654 566777777665321100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
.....++..++++.+.... ......+.+++...... ..........++.++++.+||.....++++.
T Consensus 78 -------~~~~~~~~~ig~v~q~~~~-----~l~~~tv~e~i~~~~~~-~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~ 144 (286)
T PRK13646 78 -------KYIRPVRKRIGMVFQFPES-----QLFEDTVEREIIFGPKN-FKMNLDEVKNYAHRLLMDLGFSRDVMSQSPF 144 (286)
T ss_pred -------chHHHHHhheEEEecChHh-----ccchhhHHHHHHhhHHH-cCCCHHHHHHHHHHHHHHcCCChhhhhCCcc
Confidence 0011123334443221100 00011222333211111 1123334567789999999996344578999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 145 ~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i 224 (286)
T PRK13646 145 QMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSI 224 (286)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999998764 57999999999999999999999999999
Q ss_pred EEecCChhhHH
Q 048654 396 HFYRGNFDDFE 406 (723)
Q Consensus 396 ~~~~g~~~~~~ 406 (723)
+. .|+++++.
T Consensus 225 ~~-~g~~~~~~ 234 (286)
T PRK13646 225 VS-QTSPKELF 234 (286)
T ss_pred EE-ECCHHHHH
Confidence 74 57766653
No 211
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-38 Score=332.56 Aligned_cols=209 Identities=24% Similarity=0.309 Sum_probs=164.1
Q ss_pred CeEEEEEEEEEcCCCc---ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------
Q 048654 494 PLLQLIEVSFSYPNRE---DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~---~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------- 559 (723)
..|+++|+++.|+++. ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4589999999997532 24899999999999999999999999999999999999999999987652
Q ss_pred -----eeEEEEccccccc---cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDL---LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 -----~~ig~~~q~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|..... .++.++.. +..... ..........+..+++.++|......+++.+|||||||||+||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~-~~~~~~-~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~la 162 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIA-FGPVNL-GENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALA 162 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHH-HHHHHc-CCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHH
Confidence 1478999874211 12222221 111111 1100011244678899999953334467899999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++.++|| +|++|++|+++. .|+++
T Consensus 163 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~ 236 (289)
T PRK13645 163 GIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIAD-----EVIVMHEGKVIS-IGSPF 236 (289)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEEECCEEEE-eCCHH
Confidence 9999999999999999999999999999998875 3589999999999999995 999999999974 57776
Q ss_pred HHH
Q 048654 708 EYK 710 (723)
Q Consensus 708 ~~~ 710 (723)
++.
T Consensus 237 ~~~ 239 (289)
T PRK13645 237 EIF 239 (289)
T ss_pred HHh
Confidence 653
No 212
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.6e-38 Score=336.84 Aligned_cols=198 Identities=28% Similarity=0.398 Sum_probs=159.9
Q ss_pred EcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEEEEccccc--c
Q 048654 504 SYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIGRYSQHFV--D 571 (723)
Q Consensus 504 ~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig~~~q~~~--~ 571 (723)
.|++ ..+|+||||+|.+|+++||+||||||||||+++|+|+++|++|+|.+++. ..+||++|... .
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~ 79 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDE 79 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCC
Confidence 5654 35899999999999999999999999999999999999999999998763 24899999742 2
Q ss_pred ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCC
Q 048654 572 LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLD 651 (723)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD 651 (723)
.+++.++.. +....+. .......+.+.++|+.+||.... ++++.+|||||||||+||+||+.+|++|||||||+|||
T Consensus 80 ~~tv~e~l~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD 156 (302)
T TIGR01188 80 DLTGRENLE-MMGRLYG-LPKDEAEERAEELLELFELGEAA-DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLD 156 (302)
T ss_pred CCcHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCChhHh-CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 234433322 1111111 00001234578899999997544 46789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 652 MQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 652 ~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
+.++..+.++|+++. .|||++|||++++..+|| +|++|++|+|+. .|+++++...
T Consensus 157 ~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d-----~v~~l~~G~i~~-~g~~~~l~~~ 214 (302)
T TIGR01188 157 PRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCD-----RIAIIDHGRIIA-EGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC-----EEEEEECCEEEE-ECCHHHHHHh
Confidence 999999999998873 689999999999999995 999999999974 6888877543
No 213
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=335.83 Aligned_cols=227 Identities=19% Similarity=0.210 Sum_probs=166.3
Q ss_pred cceEEEeEEEEe----CCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC--CCCcEEEEEeeeeecCCChH
Q 048654 164 KDITIDNFSVAA----RGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP--VPKNIDVLLVEQEVVGDDRS 237 (723)
Q Consensus 164 ~~I~l~nls~~y----~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~--~~~~~~i~~~~q~~~~~~~~ 237 (723)
.+|+++||++.| +...+|+||||+|.+||++||||+||||||||+++|+|+..+ .+..|+|.+.++++......
T Consensus 2 ~~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (330)
T PRK15093 2 PLLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPR 81 (330)
T ss_pred CeEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHH
Confidence 368999999999 446799999999999999999999999999999999998653 24678888887766433221
Q ss_pred HHHHHHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-----CchHHHHHHHHHHHhCCCCc
Q 048654 238 AIQAVVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-----GSDAAEAQASKILAGLGFTK 311 (723)
Q Consensus 238 ~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~L~~lgl~~ 311 (723)
.+. .++ ..++++.+.... . ......+.+.+.+........ .......++.++|+.+||.+
T Consensus 82 ~~~----------~~~~~~i~~v~Q~~~~--~--l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~ 147 (330)
T PRK15093 82 ERR----------KLVGHNVSMIFQEPQS--C--LDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKD 147 (330)
T ss_pred HHH----------HHhCCCEEEEecCcch--h--cCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCC
Confidence 111 111 123333221100 0 000112223222211110000 11234567899999999963
Q ss_pred --cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCC
Q 048654 312 --EMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCT 385 (723)
Q Consensus 312 --~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad 385 (723)
...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||
T Consensus 148 ~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 148 HKDAMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred hHHHHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC
Confidence 2347899999999999999999999999999999999999999999999998764 6799999999999999999
Q ss_pred EEEEEeCCEEEEecCChhhH
Q 048654 386 EIIHLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 386 ~Ii~L~~G~i~~~~g~~~~~ 405 (723)
+|++|++|+|+. .|+.+++
T Consensus 228 ri~vm~~G~ive-~g~~~~i 246 (330)
T PRK15093 228 KINVLYCGQTVE-TAPSKEL 246 (330)
T ss_pred EEEEEECCEEEE-ECCHHHH
Confidence 999999999975 4776554
No 214
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.9e-37 Score=317.59 Aligned_cols=213 Identities=23% Similarity=0.297 Sum_probs=159.4
Q ss_pred ceEEEeEEEEe-CCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAA-RGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y-~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++|+++.| +++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.......
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~----- 73 (222)
T PRK10908 1 MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDITRLKNRE----- 73 (222)
T ss_pred CEEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCChhH-----
Confidence 37899999999 678899999999999999999999999999999999998654 5667777665543211110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
...++..++++.+.... .....+.+++.... ............++.++++.+|+.. ..++++.+|||
T Consensus 74 -----~~~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~ 140 (222)
T PRK10908 74 -----VPFLRRQIGMIFQDHHL------LMDRTVYDNVAIPL-IIAGASGDDIRRRVSAALDKVGLLD-KAKNFPIQLSG 140 (222)
T ss_pred -----HHHHHhheEEEecCccc------cccccHHHHHHhHH-HhcCCCHHHHHHHHHHHHHHcCChh-hhhCCchhCCH
Confidence 01122333333221110 00112223222111 1111222334556788999999974 45789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 141 GEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 9999999999999999999999999999999999999988865 5799999999999999999999999999863
No 215
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=329.75 Aligned_cols=206 Identities=31% Similarity=0.459 Sum_probs=165.8
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------ee
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------------LR 561 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------------~~ 561 (723)
||+++||++.|++. ..+|+||||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 1 ILETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred CEEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 57899999999742 35899999999999999999999999999999999999999999987662 13
Q ss_pred EEEEcccccc---ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFVD---LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|.... ..++.++.. +....+ ..........+.++++.+||.+.. ++++.+|||||+|||+|||||+.+|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~-~~~~~~-~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LS~Gq~qrv~laral~~~p 156 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVA-FGPLNL-GLSKEEVEKRVKEALKAVGMEGFE-NKPPHHLSGGQKKRVAIAGILAMKP 156 (275)
T ss_pred eEEEeeChhhhhccccHHHHHH-HHHHHc-CCCHHHHHHHHHHHHHHCCCchhh-cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 7899997421 122322221 111111 110001234577899999997654 4678999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 157 ~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~ 225 (275)
T PRK13639 157 EIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYAD-----KVYVMSDGKIIK-EGTPKEVF 225 (275)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999887 3589999999999999995 999999999975 58887764
No 216
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.3e-38 Score=320.89 Aligned_cols=208 Identities=23% Similarity=0.339 Sum_probs=157.1
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.......
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~~~~~~~------- 71 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVTDLPPKD------- 71 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCcCCccc-------
Confidence 5789999999999999999999999999999999999999999999998654 4567777666543211100
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
..++++.+.... .....+.+++.... ............++.++++.+|+.. ..++++.+|||||
T Consensus 72 --------~~i~~~~q~~~~------~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 135 (213)
T cd03301 72 --------RDIAMVFQNYAL------YPHMTVYDNIAFGL-KLRKVPKDEIDERVREVAELLQIEH-LLDRKPKQLSGGQ 135 (213)
T ss_pred --------ceEEEEecChhh------ccCCCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCHH-HHhCChhhCCHHH
Confidence 011111111000 00111222222111 1111223344567889999999964 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++.+
T Consensus 136 ~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~ 212 (213)
T cd03301 136 RQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQI 212 (213)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 99999999999999999999999999999999999998764 57999999999999999999999999998743
No 217
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.3e-37 Score=316.62 Aligned_cols=210 Identities=27% Similarity=0.358 Sum_probs=156.9
Q ss_pred eEEEeEEEEeCC-eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 166 ITIDNFSVAARG-KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 166 I~l~nls~~y~~-~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
|+++|+++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~------ 72 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVSDLRGRA------ 72 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcccCCHHH------
Confidence 468999999965 6899999999999999999999999999999999998654 5667777666543221110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
...++..++++.+.... .....+.+++..... ...........++.++++.+|+.. ..++++.+||||
T Consensus 73 ----~~~~~~~i~~v~q~~~~------~~~~t~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G 140 (214)
T cd03292 73 ----IPYLRRKIGVVFQDFRL------LPDRNVYENVAFALE-VTGVPPREIRKRVPAALELVGLSH-KHRALPAELSGG 140 (214)
T ss_pred ----HHHHHHheEEEecCchh------ccCCcHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCCHH-HhhCChhhcCHH
Confidence 01122233333221110 011122333322111 111222334567889999999974 457889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|++
T Consensus 141 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 141 EQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999999999865 57999999999999999999999999874
No 218
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.7e-37 Score=321.94 Aligned_cols=221 Identities=23% Similarity=0.290 Sum_probs=160.3
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++||+++|+++++|+|+||+|++|++++|+||||||||||+++|+|+....|..|.|.+.+..+........
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~------ 74 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDER------ 74 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHh------
Confidence 57899999999999999999999999999999999999999999999984223566778777665432211110
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHh------cCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQI------LGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
.+..+.++.+.... .....+.+.+......... ........++.++++.+|+.....++++.
T Consensus 75 ------~~~~i~~v~q~~~~------~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 75 ------ARAGLFLAFQYPEE------IPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred ------hccceEeeeccccc------cCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 00011111111000 0011112222111111110 11123346788999999996444567776
Q ss_pred -CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhh-CCEEEEEeCCE
Q 048654 320 -SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTV-CTEIIHLHDQK 394 (723)
Q Consensus 320 -~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~i-ad~Ii~L~~G~ 394 (723)
+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+ ||+|++|++|+
T Consensus 143 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~ 222 (243)
T TIGR01978 143 EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGR 222 (243)
T ss_pred cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCE
Confidence 59999999999999999999999999999999999999999999876 57999999999999998 89999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++ +.|+++.+
T Consensus 223 i~-~~g~~~~~ 232 (243)
T TIGR01978 223 IV-KSGDVELA 232 (243)
T ss_pred EE-EecCHHHh
Confidence 96 45766543
No 219
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-38 Score=359.55 Aligned_cols=210 Identities=30% Similarity=0.579 Sum_probs=171.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccc--cc
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFV--DL 572 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~--~~ 572 (723)
||+++|++++|+++ .+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+...++|++|... ..
T Consensus 1 ml~i~~ls~~~~~~--~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (530)
T PRK15064 1 MLSTANITMQFGAK--PLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEE 78 (530)
T ss_pred CEEEEEEEEEeCCc--EeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCC
Confidence 58899999999753 589999999999999999999999999999999999999999999987777999999642 22
Q ss_pred cCccccHHHHHH----------hhC--CC------------------CCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCH
Q 048654 573 LTMEETPVSYLL----------RLH--PD------------------QEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSG 622 (723)
Q Consensus 573 ~~~~~~~~~~~~----------~~~--~~------------------~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSG 622 (723)
+++.++...... ..+ +. ..+.....++..+|+.+||......+++.+|||
T Consensus 79 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSg 158 (530)
T PRK15064 79 FTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEVAP 158 (530)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhcCH
Confidence 233222211000 000 00 000112345778999999975443457899999
Q ss_pred HHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEec
Q 048654 623 GQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRF 702 (723)
Q Consensus 623 GqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~ 702 (723)
||||||+|||+|+.+|+||||||||+|||+.++..|.++|.+.+.|||+||||++++..+|| +|++|++|+++.+
T Consensus 159 Gq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d-----~i~~l~~g~i~~~ 233 (530)
T PRK15064 159 GWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCT-----HMADLDYGELRVY 233 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcc-----eEEEEeCCEEEEe
Confidence 99999999999999999999999999999999999999999888899999999999999995 9999999999667
Q ss_pred CCCHHHHHH
Q 048654 703 PGTFEEYKE 711 (723)
Q Consensus 703 ~g~~~~~~~ 711 (723)
.|++++|.+
T Consensus 234 ~g~~~~~~~ 242 (530)
T PRK15064 234 PGNYDEYMT 242 (530)
T ss_pred cCCHHHHHH
Confidence 899988754
No 220
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=324.09 Aligned_cols=225 Identities=19% Similarity=0.272 Sum_probs=166.6
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~ 238 (723)
...+|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..|. +..|+|.+.++.+......
T Consensus 4 ~~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~- 82 (254)
T PRK14273 4 NEAIIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD- 82 (254)
T ss_pred CCceEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc-
Confidence 344699999999999889999999999999999999999999999999999987653 3578888777654321100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCC---ccccC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFT---KEMQG 315 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~---~~~~~ 315 (723)
...++..++++.+.... . ...+.+++.................++.++++.+|+. ....+
T Consensus 83 ----------~~~~~~~i~~v~q~~~~------~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~ 145 (254)
T PRK14273 83 ----------ILELRRKIGMVFQTPNP------F-LMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLN 145 (254)
T ss_pred ----------HHHHhhceEEEeecccc------c-cCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHh
Confidence 00112233333221110 0 1122233322111110011223456788889998873 12347
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|
T Consensus 146 ~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G 225 (254)
T PRK14273 146 TNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNG 225 (254)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999999876 479999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++. .|+.+++
T Consensus 226 ~i~~-~g~~~~~ 236 (254)
T PRK14273 226 CIEE-ESSTDEL 236 (254)
T ss_pred EEEE-eCCHHHH
Confidence 9974 4666554
No 221
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5e-38 Score=319.46 Aligned_cols=195 Identities=26% Similarity=0.414 Sum_probs=156.6
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------eeE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------------LRI 562 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------------~~i 562 (723)
|+++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 468999999975 35899999999999999999999999999999999999999999988663 237
Q ss_pred EEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 563 GRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 563 g~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|++|... ..+++.++......... ..........+.++++.+|+.... ++++.+|||||+|||+|||||+.+|+|
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~l 156 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVK-GMSKAEAEERALELLEKVGLADKA-DAYPAQLSGGQQQRVAIARALAMNPKV 156 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhc-CCCHHHHHHHHHHHHHHcCCHhHh-hhCccccCHHHHHHHHHHHHHhcCCCE
Confidence 88988642 12233333211111011 110001234577889999997544 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
|||||||+|||+.++..+.++|.++ +.|||++|||++++..+|| +|++|++|+|
T Consensus 157 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d-----~i~~l~~g~i 213 (213)
T cd03262 157 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVAD-----RVIFMDDGRI 213 (213)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCcC
Confidence 9999999999999999999999876 3589999999999999995 9999999974
No 222
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.4e-37 Score=340.64 Aligned_cols=217 Identities=24% Similarity=0.335 Sum_probs=167.7
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
.++|+++|+++.|+++++|+|+||+|.+|++++|+|||||||||||++|+|+.. |..|+|.+.+..+......
T Consensus 12 ~~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~----- 84 (375)
T PRK09452 12 SPLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDITHVPAE----- 84 (375)
T ss_pred CceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHH-----
Confidence 346999999999999999999999999999999999999999999999999865 4567787777665432110
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
...++++.+.... .....+.+++...+. ...........++.++++.+||.. ..++++.+||
T Consensus 85 ----------~r~ig~vfQ~~~l------fp~ltv~eNi~~~l~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~p~~LS 146 (375)
T PRK09452 85 ----------NRHVNTVFQSYAL------FPHMTVFENVAFGLR-MQKTPAAEITPRVMEALRMVQLEE-FAQRKPHQLS 146 (375)
T ss_pred ----------HCCEEEEecCccc------CCCCCHHHHHHHHHh-hcCCCHHHHHHHHHHHHHHcCCch-hhhCChhhCC
Confidence 0112222211100 112233444433221 112233445678899999999974 5689999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||+|||||+.+|+||||||||++||+..+.+|.+.|+++ +.|+|+||||++++..+||+|++|++|+++.
T Consensus 147 gGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~- 225 (375)
T PRK09452 147 GGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQ- 225 (375)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-
Confidence 99999999999999999999999999999999999999888754 6799999999999999999999999999975
Q ss_pred cCChhhH
Q 048654 399 RGNFDDF 405 (723)
Q Consensus 399 ~g~~~~~ 405 (723)
.|++.++
T Consensus 226 ~g~~~~i 232 (375)
T PRK09452 226 DGTPREI 232 (375)
T ss_pred EcCHHHH
Confidence 4676554
No 223
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=326.13 Aligned_cols=206 Identities=33% Similarity=0.416 Sum_probs=165.0
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
+|+++|+++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 2 ~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGGR--TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 68999999999753 5899999999999999999999999999999999999999999998763 2478
Q ss_pred EEccccccccCccccHHHHHHhhC-CCCCC-CcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc------
Q 048654 564 RYSQHFVDLLTMEETPVSYLLRLH-PDQEG-LSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM------ 635 (723)
Q Consensus 564 ~~~q~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~------ 635 (723)
|++|..... ...+....+.... ..... ......+..+++.+||.... ++.+.+|||||||||+|||||+
T Consensus 80 ~~~q~~~~~--~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGe~qrv~la~al~~~~~~~ 156 (258)
T PRK13548 80 VLPQHSSLS--FPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-GRDYPQLSGGEQQRVQLARVLAQLWEPD 156 (258)
T ss_pred EEccCCcCC--CCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-cCCcccCCHHHHHHHHHHHHHhcccccC
Confidence 999874211 1123222221111 10000 01234577899999997544 4677999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++ ..|+++++..
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~-~~~~~~~~~~ 230 (258)
T PRK13548 157 GPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYAD-----RIVLLHQGRLV-ADGTPAEVLT 230 (258)
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcC-----EEEEEECCEEE-eeCCHHHHhC
Confidence 599999999999999999999999999875 3589999999999999995 99999999997 4578877644
No 224
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.3e-37 Score=320.97 Aligned_cols=208 Identities=28% Similarity=0.414 Sum_probs=167.3
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------ee
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ 561 (723)
++|+++|+++.|++ ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..
T Consensus 1 ~~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 1 PILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred CeEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 47899999999975 35899999999999999999999999999999999999999999988763 13
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCC----CCCCC---cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHH
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHP----DQEGL---SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAr 632 (723)
++|++|... ..+++.++.... ..... ...+. .....+..+++.+|+.... ++++.+|||||+|||+|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELA-LPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-DRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHh-hhcccccccccccccHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHH
Confidence 889988642 223333332111 11000 00000 1234578899999997544 4677999999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++ ..|+++++.
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~g~~~-~~~~~~~~~ 230 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIAD-----KVTVLHQGSVL-AEGSLDQVQ 230 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC-----EEEEEECCeEE-eeCCHHHHh
Confidence 9999999999999999999999999999999874 599999999999999995 99999999997 457887765
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
.
T Consensus 231 ~ 231 (242)
T TIGR03411 231 A 231 (242)
T ss_pred c
Confidence 3
No 225
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-38 Score=325.52 Aligned_cols=217 Identities=27% Similarity=0.386 Sum_probs=162.9
Q ss_pred eEEEeEEEEeCC-eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 166 ITIDNFSVAARG-KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 166 I~l~nls~~y~~-~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
|+++|++++|++ +++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.+..+.......
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~------ 72 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIREQDPVE------ 72 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCcCChHH------
Confidence 468999999988 8899999999999999999999999999999999998654 4566777665543211111
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc-cccCCCCCCCCh
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK-EMQGRPTKSFSG 323 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~-~~~~~~~~~LSG 323 (723)
++..++++.+.... .....+.+++.... .+.........+++.++++.+|+.. ...++++.+|||
T Consensus 73 -------~~~~i~~~~q~~~~------~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~ 138 (242)
T cd03295 73 -------LRRKIGYVIQQIGL------FPHMTVEENIALVP-KLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSG 138 (242)
T ss_pred -------hhcceEEEccCccc------cCCCcHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCH
Confidence 11222333221110 00112233332211 1111222344567889999999974 245789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+|||+++++..+||+|++|++|+++. .
T Consensus 139 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~ 217 (242)
T cd03295 139 GQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQ-V 217 (242)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-e
Confidence 9999999999999999999999999999999999999998764 5799999999999999999999999999974 4
Q ss_pred CChhhH
Q 048654 400 GNFDDF 405 (723)
Q Consensus 400 g~~~~~ 405 (723)
|+.+.+
T Consensus 218 ~~~~~~ 223 (242)
T cd03295 218 GTPDEI 223 (242)
T ss_pred cCHHHH
Confidence 665444
No 226
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.5e-37 Score=323.42 Aligned_cols=208 Identities=25% Similarity=0.355 Sum_probs=164.8
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----cceEEECCc----------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT-----EGEVRRSQK---------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~-----~G~I~~~~~---------- 559 (723)
+|+++||++.|++. .+|+|+||+|.+||+++|+|+||||||||+++|+|+++|+ +|+|.+++.
T Consensus 1 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 1 AIEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred CEEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 47899999999753 4899999999999999999999999999999999999998 999987653
Q ss_pred ---eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 560 ---~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lAr 632 (723)
..++|++|...-. .++.++.... ...............+..+++.+|+.. ....+++.+|||||||||+|||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lar 157 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYG-PRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIAR 157 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhH-HHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHH
Confidence 2488999874211 2333332111 111110000012345778999999962 2234677999999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||+.+|++|||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 231 (247)
T TIGR00972 158 ALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISD-----RTAFFYDGELVE-YGPTEQIF 231 (247)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999998874 699999999999999995 999999999974 57877764
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
.
T Consensus 232 ~ 232 (247)
T TIGR00972 232 T 232 (247)
T ss_pred h
Confidence 3
No 227
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=323.36 Aligned_cols=206 Identities=24% Similarity=0.340 Sum_probs=165.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------- 559 (723)
+|+++|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGAH--QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECCe--eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 57899999999753 5899999999999999999999999999999999999999999988653
Q ss_pred --eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 560 --LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 560 --~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
..++|++|... ..+++.++.......... .........+..+++.+|+.... ++++..|||||||||+|||||+
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~laral~ 157 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLG-LSKDQALARAEKLLERLRLKPYA-DRFPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHh
Confidence 14789998642 222333332111111111 00001234577889999997544 4667999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
.+|+||||||||+|||+.++..+.++|+++ +.|||+||||.+++..+|| ++++|++|+++ +.|+++++.
T Consensus 158 ~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d-----~i~~l~~g~i~-~~~~~~~~~ 229 (242)
T PRK11124 158 MEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTAS-----RVVYMENGHIV-EQGDASCFT 229 (242)
T ss_pred cCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcC-----EEEEEECCEEE-EeCCHHHhc
Confidence 999999999999999999999999999875 3689999999999999995 99999999997 457877764
No 228
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-38 Score=324.21 Aligned_cols=214 Identities=29% Similarity=0.408 Sum_probs=160.2
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+.|+++|++++|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|.|.+.+.++.......
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~----- 74 (241)
T PRK14250 2 NEIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDIKTIDVID----- 74 (241)
T ss_pred ceEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhhhcChHH-----
Confidence 458999999999989999999999999999999999999999999999998654 5567777665543211110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
++..++++.+.... . ...+.+++.... ... .....++.++++.+|+.....++++.+|||
T Consensus 75 --------~~~~i~~~~q~~~~------~-~~tv~e~l~~~~----~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~ 134 (241)
T PRK14250 75 --------LRRKIGMVFQQPHL------F-EGTVKDNIEYGP----MLK-GEKNVDVEYYLSIVGLNKEYATRDVKNLSG 134 (241)
T ss_pred --------hhhcEEEEecCchh------c-hhhHHHHHhcch----hhc-CcHHHHHHHHHHHcCCCHHHhhCCcccCCH
Confidence 11122222211000 0 011112111100 001 112356788999999964445789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++..
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~- 213 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEY- 213 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEe-
Confidence 9999999999999999999999999999999999999988753 67999999999999999999999999999754
Q ss_pred CChhhH
Q 048654 400 GNFDDF 405 (723)
Q Consensus 400 g~~~~~ 405 (723)
|+..++
T Consensus 214 ~~~~~~ 219 (241)
T PRK14250 214 AKTYDF 219 (241)
T ss_pred CCHHHH
Confidence 555444
No 229
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-37 Score=321.68 Aligned_cols=223 Identities=20% Similarity=0.250 Sum_probs=165.2
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCC---CCCCCcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRK---IPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~---~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
++|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+. .+.+..|+|.+.+..+......
T Consensus 2 ~~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~--- 78 (250)
T PRK14245 2 VKIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQ--- 78 (250)
T ss_pred cEEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccccc---
Confidence 4689999999999999999999999999999999999999999999999962 2223468888777655321100
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---cccCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQGR 316 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~ 316 (723)
...++..++++++.... . ...+.+++...+. ..... ......++.++++.+|+.. ...++
T Consensus 79 --------~~~~~~~i~~v~q~~~~------~-~~tv~~nl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (250)
T PRK14245 79 --------VDELRKNVGMVFQRPNP------F-PKSIFENVAYGLR-VNGVKDNAFIRQRVEETLKGAALWDEVKDKLKE 142 (250)
T ss_pred --------HHHHhhheEEEecCCcc------C-cccHHHHHHHHHH-HcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhC
Confidence 01112233333322111 0 0122222221111 11111 1234567888999999853 23468
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 143 ~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~ 222 (250)
T PRK14245 143 SAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGE 222 (250)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999876 4799999999999999999999999999
Q ss_pred EEEecCChhhHH
Q 048654 395 LHFYRGNFDDFE 406 (723)
Q Consensus 395 i~~~~g~~~~~~ 406 (723)
++. .|+.+++.
T Consensus 223 ~~~-~~~~~~~~ 233 (250)
T PRK14245 223 MVE-YDDTKKIF 233 (250)
T ss_pred EEE-ECCHHHHh
Confidence 964 57766653
No 230
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-37 Score=318.10 Aligned_cols=209 Identities=29% Similarity=0.423 Sum_probs=159.6
Q ss_pred ceEEEeEEEEeCCe----eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 165 DITIDNFSVAARGK----ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 165 ~I~l~nls~~y~~~----~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
+|+++|++++|+++ ++|+|+||+|++|++++|+|+||||||||+++|+|+..| .+|+|.+.+..+.. ...
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~-~~~--- 74 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVVK-EPA--- 74 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEccc-CHH---
Confidence 37899999999876 899999999999999999999999999999999998655 45667666655431 110
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
.++..++++.+.... .....+.+++.... ............++.++++.+|+.+ ..++++.+
T Consensus 75 ----------~~~~~i~~~~q~~~~------~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~ 136 (218)
T cd03266 75 ----------EARRRLGFVSDSTGL------YDRLTARENLEYFA-GLYGLKGDELTARLEELADRLGMEE-LLDRRVGG 136 (218)
T ss_pred ----------HHHhhEEEecCCccc------CcCCCHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCCHH-HHhhhhhh
Confidence 112223333221111 01112233322211 1111223345678899999999964 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~ 216 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVY 216 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEee
Confidence 9999999999999999999999999999999999999999999865 5799999999999999999999999999863
No 231
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-37 Score=316.61 Aligned_cols=206 Identities=30% Similarity=0.382 Sum_probs=153.6
Q ss_pred EEEeEEEEeCC--eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 167 TIDNFSVAARG--KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 167 ~l~nls~~y~~--~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~------ 72 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKLSLKE------ 72 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccCCHHH------
Confidence 36899999987 8899999999999999999999999999999999998654 4566777666543221111
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
++..++++.+.... ......+.+++.... ............++.++++.+|+.. ..++++.+||||
T Consensus 73 -------~~~~i~~~~q~~~~-----~~~~~t~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG 138 (211)
T cd03225 73 -------LRRKVGLVFQNPDD-----QFFGPTVEEEVAFGL-ENLGLPEEEIEERVEEALELVGLEG-LRDRSPFTLSGG 138 (211)
T ss_pred -------HHhhceEEecChhh-----hcCCCcHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCcHh-hhcCCcccCCHH
Confidence 12223333221100 000112222221111 1111122334567889999999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 139 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 139 QKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999999999999765 4699999999999999999999999884
No 232
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-37 Score=317.69 Aligned_cols=213 Identities=25% Similarity=0.379 Sum_probs=160.1
Q ss_pred eEEEeEEEEeCC--eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 166 ITIDNFSVAARG--KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 166 I~l~nls~~y~~--~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
|+++||++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.... .
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~-~------ 71 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIRTDR-K------ 71 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccch-H------
Confidence 578999999987 7899999999999999999999999999999999998655 4566766665442210 0
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
.++..++++.+.... .....+.+++... .............++.++++.+|+.. ..++++.+|||
T Consensus 72 -------~~~~~i~~v~q~~~~------~~~~tv~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~ 136 (220)
T cd03263 72 -------AARQSLGYCPQFDAL------FDELTVREHLRFY-ARLKGLPKSEIKEEVELLLRVLGLTD-KANKRARTLSG 136 (220)
T ss_pred -------HHhhhEEEecCcCCc------cccCCHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHcCCHH-HHhChhhhCCH
Confidence 112223333221110 0011222222211 11111222334567889999999964 45788999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
||||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||++||+++++..+||+|++|++|+++. .|+
T Consensus 137 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~-~~~ 215 (220)
T cd03263 137 GMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRC-IGS 215 (220)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe-cCC
Confidence 9999999999999999999999999999999999999999876 3699999999999999999999999999974 455
Q ss_pred hh
Q 048654 402 FD 403 (723)
Q Consensus 402 ~~ 403 (723)
.+
T Consensus 216 ~~ 217 (220)
T cd03263 216 PQ 217 (220)
T ss_pred HH
Confidence 43
No 233
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.2e-37 Score=325.61 Aligned_cols=224 Identities=23% Similarity=0.362 Sum_probs=164.1
Q ss_pred ceEEEeEEEEeC---------CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCC
Q 048654 165 DITIDNFSVAAR---------GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDD 235 (723)
Q Consensus 165 ~I~l~nls~~y~---------~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~ 235 (723)
+|+++||++.|+ ++++|+|+||+|++|++++|+|+|||||||||++|+|+..| ..|+|.+.+..+....
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~ 79 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLYQLD 79 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEccccC
Confidence 489999999995 36899999999999999999999999999999999998754 4567777665543221
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccC
Q 048654 236 RSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQG 315 (723)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~ 315 (723)
... ...++..++++.+..... ......+.+.+.........+.......++.++++.+|+.....+
T Consensus 80 ~~~----------~~~~~~~i~~v~q~~~~~----~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 145 (265)
T TIGR02769 80 RKQ----------RRAFRRDVQLVFQDSPSA----VNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDAD 145 (265)
T ss_pred HHH----------HHHHhhceEEEecChhhh----cCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 110 011122233332211000 000112222222211111112223445678899999999644557
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEe
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLH 391 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~ 391 (723)
+++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|+
T Consensus 146 ~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~ 225 (265)
T TIGR02769 146 KLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMD 225 (265)
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEe
Confidence 899999999999999999999999999999999999999999998888754 6799999999999999999999999
Q ss_pred CCEEEEecCChhhH
Q 048654 392 DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 ~G~i~~~~g~~~~~ 405 (723)
+|+++ +.|+.+++
T Consensus 226 ~G~i~-~~g~~~~~ 238 (265)
T TIGR02769 226 KGQIV-EECDVAQL 238 (265)
T ss_pred CCEEE-EECCHHHH
Confidence 99996 45776554
No 234
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-37 Score=319.61 Aligned_cols=223 Identities=23% Similarity=0.351 Sum_probs=165.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCC-hHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDD-RSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~-~~~~~~~~ 243 (723)
+|+++|+++.|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.... ...
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~----- 74 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFDFSKTPSD----- 74 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecccccccch-----
Confidence 58999999999989999999999999999999999999999999999998654 5667777666542110 000
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
.....++..++++.+.... .....+.+++......+..........++.++++.+|+.. ..++.+.+|||
T Consensus 75 ---~~~~~~~~~i~~~~q~~~~------~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~ 144 (242)
T PRK11124 75 ---KAIRELRRNVGMVFQQYNL------WPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKP-YADRFPLHLSG 144 (242)
T ss_pred ---hhHHHHHhheEEEecCccc------cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCH
Confidence 0011122333433322111 0111223332211111111222334567889999999964 45789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++ +.|
T Consensus 145 G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~-~~~ 223 (242)
T PRK11124 145 GQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIV-EQG 223 (242)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeC
Confidence 9999999999999999999999999999999999999999864 579999999999999999999999999996 457
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+++++
T Consensus 224 ~~~~~ 228 (242)
T PRK11124 224 DASCF 228 (242)
T ss_pred CHHHh
Confidence 76655
No 235
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=322.09 Aligned_cols=206 Identities=27% Similarity=0.370 Sum_probs=163.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------e
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------L 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~ 560 (723)
.++|+++|+++.|++ ..+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 80 (237)
T PRK11614 3 KVMLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMRE 80 (237)
T ss_pred ccEEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHh
Confidence 358999999999975 35899999999999999999999999999999999999999999987663 1
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhC-CCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKF-GLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
.++|++|... ..+++.++.... ...... ......+..+++.+ ++.... ..++.+|||||||||+|||||+.+
T Consensus 81 ~i~~~~q~~~~~~~~tv~~~l~~~--~~~~~~--~~~~~~~~~~l~~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 81 AVAIVPEGRRVFSRMTVEENLAMG--GFFAER--DQFQERIKWVYELFPRLHERR-IQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred CEEEeccCcccCCCCcHHHHHHHh--hhccCh--hHHHHHHHHHHHHHHHHHHHH-hCchhhCCHHHHHHHHHHHHHHhC
Confidence 3889988642 112232221110 011110 01223456677777 465433 356789999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+||||||||+|||+.++..+.++|+++ +.|||++|||++++.++|| ++++|++|+++ +.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~-~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLAD-----RGYVLENGHVV-LEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCC-----EEEEEeCCEEE-eeCCHHHHhc
Confidence 9999999999999999999999999876 3699999999999999995 99999999997 4688887753
No 236
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-38 Score=329.32 Aligned_cols=204 Identities=26% Similarity=0.321 Sum_probs=163.3
Q ss_pred EEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------ee
Q 048654 497 QLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------------LR 561 (723)
Q Consensus 497 ~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------------~~ 561 (723)
.+.|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 26 ~~~~~~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQT--VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCCc--eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 567999999763 5899999999999999999999999999999999999999999987652 24
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
++|++|... ..+++.++... ..... ..........+.++++.+||.... ++++.+|||||||||+|||||+.+|+
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~-~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrv~lAral~~~p~ 180 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAF-GLEVQ-GVPRAEREERAAEALELVGLEGWE-HKYPDELSGGMQQRVGLARALAVDPD 180 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHH-HHHhc-CCCHHHHHHHHHHHHHHcCCHhHh-hCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 889998642 22333333211 11111 110001234577899999997544 46679999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++. .|+++++.+
T Consensus 181 illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d-----~v~~l~~G~i~~-~g~~~~~~~ 250 (269)
T cd03294 181 ILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGD-----RIAIMKDGRLVQ-VGTPEEILT 250 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEECCEEEE-eCCHHHHHh
Confidence 99999999999999999999999876 3689999999999999995 999999999975 577776643
No 237
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.8e-37 Score=333.86 Aligned_cols=230 Identities=20% Similarity=0.292 Sum_probs=169.1
Q ss_pred CccceEEEeEEEEeC----CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC-CCcEEEEEeeeeecCCCh
Q 048654 162 NVKDITIDNFSVAAR----GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV-PKNIDVLLVEQEVVGDDR 236 (723)
Q Consensus 162 ~~~~I~l~nls~~y~----~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~-~~~~~i~~~~q~~~~~~~ 236 (723)
...+|+++||++.|+ ...+|+||||+|++||++||+|+||||||||+++|+|+..+. ...|+|.+.+.++.....
T Consensus 9 ~~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~ 88 (330)
T PRK09473 9 ADALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPE 88 (330)
T ss_pred CCceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCH
Confidence 345799999999994 357999999999999999999999999999999999987542 126788887776643322
Q ss_pred HHHHHHHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc--cc
Q 048654 237 SAIQAVVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK--EM 313 (723)
Q Consensus 237 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~--~~ 313 (723)
..+ ..++ ..++++.+.... .......+.+.+.+...........+...++.++|+.+||.. ..
T Consensus 89 ~~~----------~~~r~~~i~~v~Q~~~~----~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~ 154 (330)
T PRK09473 89 KEL----------NKLRAEQISMIFQDPMT----SLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKR 154 (330)
T ss_pred HHH----------HHHhcCCEEEEEcCchh----hcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHH
Confidence 111 1111 123333221100 000111223333222211111233445678899999999964 22
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEE
Q 048654 314 QGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIH 389 (723)
Q Consensus 314 ~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~ 389 (723)
.++++.+|||||+|||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++..+||+|++
T Consensus 155 ~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~v 234 (330)
T PRK09473 155 MKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLV 234 (330)
T ss_pred hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEE
Confidence 46799999999999999999999999999999999999999999999888754 67999999999999999999999
Q ss_pred EeCCEEEEecCChhhHH
Q 048654 390 LHDQKLHFYRGNFDDFE 406 (723)
Q Consensus 390 L~~G~i~~~~g~~~~~~ 406 (723)
|++|+|+. .|+.+++.
T Consensus 235 m~~G~ive-~g~~~~i~ 250 (330)
T PRK09473 235 MYAGRTME-YGNARDVF 250 (330)
T ss_pred EECCEEEE-ECCHHHHH
Confidence 99999975 47766653
No 238
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-37 Score=331.65 Aligned_cols=233 Identities=21% Similarity=0.294 Sum_probs=165.6
Q ss_pred ceEEEeEEEEeCCe-----eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCCh--H
Q 048654 165 DITIDNFSVAARGK-----ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDR--S 237 (723)
Q Consensus 165 ~I~l~nls~~y~~~-----~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~--~ 237 (723)
.|+++|++++|++. ++|+||||+|.+|++++|+|+||||||||+++|+|+..|. .|+|.+.+........ +
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~--~G~i~~~g~~~~~~~~~~~ 79 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD--TGTIEWIFKDEKNKKKTKE 79 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC--CcEEEEeceeccccccccc
Confidence 48999999999753 5999999999999999999999999999999999987654 4566554432210000 0
Q ss_pred H---HHHH-HH-----hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCC
Q 048654 238 A---IQAV-VS-----AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLG 308 (723)
Q Consensus 238 ~---~~~~-~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lg 308 (723)
. +..+ +. .......++..++++.+.... ......+.+++...... .........+++.++++.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~-----~l~~~tv~e~i~~~~~~-~~~~~~~~~~~~~~~l~~~g 153 (305)
T PRK13651 80 KEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEY-----QLFEQTIEKDIIFGPVS-MGVSKEEAKKRAAKYIELVG 153 (305)
T ss_pred ccccccccccccccccccchHHHHHhceEEEeeCccc-----ccccccHHHHHHhhHHH-cCCCHHHHHHHHHHHHHHcC
Confidence 0 0000 00 000111223344444332100 00011233333221111 12233455678999999999
Q ss_pred CCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCC
Q 048654 309 FTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCT 385 (723)
Q Consensus 309 l~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad 385 (723)
|.....++++.+|||||||||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++..+||
T Consensus 154 L~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ad 233 (305)
T PRK13651 154 LDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTK 233 (305)
T ss_pred CChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCC
Confidence 9644568999999999999999999999999999999999999999999999988765 6799999999999999999
Q ss_pred EEEEEeCCEEEEecCChhhHH
Q 048654 386 EIIHLHDQKLHFYRGNFDDFE 406 (723)
Q Consensus 386 ~Ii~L~~G~i~~~~g~~~~~~ 406 (723)
||++|++|+++. .|+.+++.
T Consensus 234 rv~vl~~G~i~~-~g~~~~~~ 253 (305)
T PRK13651 234 RTIFFKDGKIIK-DGDTYDIL 253 (305)
T ss_pred EEEEEECCEEEE-ECCHHHHh
Confidence 999999999964 57766653
No 239
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=327.31 Aligned_cols=218 Identities=26% Similarity=0.350 Sum_probs=163.8
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++|+++.|+ +.++|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~----- 76 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREVNAENEKW----- 76 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEECCCCCHHH-----
Confidence 589999999996 57899999999999999999999999999999999998654 5667777666543221111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
++..++++.+.... ......+.+++..... ...+.......++.++++.+|+. ...++++.+|||
T Consensus 77 --------~~~~i~~v~q~~~~-----~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSg 141 (274)
T PRK13647 77 --------VRSKVGLVFQDPDD-----QVFSSTVWDDVAFGPV-NMGLDKDEVERRVEEALKAVRMW-DFRDKPPYHLSY 141 (274)
T ss_pred --------HHhhEEEEecChhh-----hhccCcHHHHHHhhHH-HcCCCHHHHHHHHHHHHHHCCCH-HHhcCChhhCCH
Confidence 11222222221000 0001122233321111 11122334456788999999996 445799999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++. .|
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~g 220 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLA-EG 220 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EC
Confidence 9999999999999999999999999999999999999999765 5799999999999999999999999999974 46
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+.+.+
T Consensus 221 ~~~~~ 225 (274)
T PRK13647 221 DKSLL 225 (274)
T ss_pred CHHHh
Confidence 66544
No 240
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=342.21 Aligned_cols=192 Identities=28% Similarity=0.382 Sum_probs=155.4
Q ss_pred cceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------eeEEEEccccc--ccc
Q 048654 511 FKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------------LRIGRYSQHFV--DLL 573 (723)
Q Consensus 511 ~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------------~~ig~~~q~~~--~~~ 573 (723)
.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|++++. ..++|++|.+. ..+
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 3799999999999999999999999999999999999999999988652 25899999742 223
Q ss_pred CccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHH
Q 048654 574 TMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQ 653 (723)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~ 653 (723)
++.++... ...... .......+.+.++|+.+||.... ++++.+|||||||||+|||||+.+|+||||||||++||+.
T Consensus 122 Tv~enl~~-~~~~~~-~~~~~~~~~~~e~L~~~gL~~~~-~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~ 198 (400)
T PRK10070 122 TVLDNTAF-GMELAG-INAEERREKALDALRQVGLENYA-HSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPL 198 (400)
T ss_pred CHHHHHHH-HHHhcC-CCHHHHHHHHHHHHHHcCCChhh-hcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHH
Confidence 44444221 111111 00001234678899999997654 4667999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 654 SIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 654 s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
++..+.+.|.++ +.|||+||||++++..+|| +|++|++|+|+. .|+++++..
T Consensus 199 ~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~D-----ri~vL~~G~i~~-~g~~~~l~~ 254 (400)
T PRK10070 199 IRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGD-----RIAIMQNGEVVQ-VGTPDEILN 254 (400)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCC-----EEEEEECCEEEe-cCCHHHHHh
Confidence 999999999775 3589999999999999995 999999999974 578777643
No 241
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-38 Score=318.98 Aligned_cols=207 Identities=27% Similarity=0.440 Sum_probs=157.6
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++++|+|+||+|++| +++|+||||||||||+++|+|+..| .+|+|.+.+.++.... .
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~-~-------- 68 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLKQP-Q-------- 68 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCccccch-H--------
Confidence 57899999999889999999999999 9999999999999999999998654 4566776665442111 0
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
.++..++++.+.... .....+.+++.... .+..........++.++++.+|+.. ..++++.+|||||
T Consensus 69 -----~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 135 (211)
T cd03264 69 -----KLRRRIGYLPQEFGV------YPNFTVREFLDYIA-WLKGIPSKEVKARVDEVLELVNLGD-RAKKKIGSLSGGM 135 (211)
T ss_pred -----HHHhheEEecCCCcc------cccCCHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHCCCHH-HHhCchhhCCHHH
Confidence 112233333221110 01112223322211 1111222334567889999999974 4478999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++.
T Consensus 136 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~ 209 (211)
T cd03264 136 RRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVF 209 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999876 5799999999999999999999999999863
No 242
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.8e-37 Score=319.56 Aligned_cols=217 Identities=23% Similarity=0.327 Sum_probs=161.2
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++||++.|+++.+|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.+..+........
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~------ 72 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITKLPMHKR------ 72 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccCCHhHH------
Confidence 5789999999999999999999999999999999999999999999998654 45667666654432111100
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
.+..++++.+.... .....+.+++..... ...........++.++++.+|+.. ..++++.+|||||
T Consensus 73 ------~~~~i~~~~q~~~~------~~~~tv~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 138 (232)
T cd03218 73 ------ARLGIGYLPQEASI------FRKLTVEENILAVLE-IRGLSKKEREEKLEELLEEFHITH-LRKSKASSLSGGE 138 (232)
T ss_pred ------HhccEEEecCCccc------cccCcHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHH
Confidence 01112222211100 011122233322111 111122334567889999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCCh
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNF 402 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~ 402 (723)
||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+.
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~ 217 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVL-AEGTP 217 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EEeCH
Confidence 99999999999999999999999999999999999988754 579999999999999999999999999996 45666
Q ss_pred hhH
Q 048654 403 DDF 405 (723)
Q Consensus 403 ~~~ 405 (723)
+++
T Consensus 218 ~~~ 220 (232)
T cd03218 218 EEI 220 (232)
T ss_pred HHh
Confidence 554
No 243
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.6e-38 Score=316.57 Aligned_cols=200 Identities=28% Similarity=0.422 Sum_probs=151.4
Q ss_pred EEeEEEEeCC-eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhh
Q 048654 168 IDNFSVAARG-KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAH 246 (723)
Q Consensus 168 l~nls~~y~~-~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~ 246 (723)
++|++++|++ +++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|.|.+.+..+.. .
T Consensus 2 ~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~---~--------- 67 (205)
T cd03226 2 IENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKA---K--------- 67 (205)
T ss_pred cccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhh---H---------
Confidence 6799999988 8999999999999999999999999999999999998654 55667666554321 0
Q ss_pred HHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHH
Q 048654 247 EELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWR 326 (723)
Q Consensus 247 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqr 326 (723)
..+..++++.+.... ......+.+++.... .... ....++.++++.+|+.. ..++++.+||||||
T Consensus 68 ----~~~~~i~~~~q~~~~-----~~~~~tv~e~l~~~~---~~~~--~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~ 132 (205)
T cd03226 68 ----ERRKSIGYVMQDVDY-----QLFTDSVREELLLGL---KELD--AGNEQAETVLKDLDLYA-LKERHPLSLSGGQK 132 (205)
T ss_pred ----HhhcceEEEecChhh-----hhhhccHHHHHhhhh---hhcC--ccHHHHHHHHHHcCCch-hcCCCchhCCHHHH
Confidence 011122222211000 000011222221111 1111 12357889999999974 45789999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 327 MRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 327 QRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++
T Consensus 133 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 133 QRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999999999999999865 579999999999999999999999999873
No 244
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-37 Score=321.99 Aligned_cols=223 Identities=22% Similarity=0.284 Sum_probs=165.9
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCC--C-CCCcEEEEEeeeeecCCChHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKI--P-VPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~--~-~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
.+.|+++|++++|+++++|+|+||+|.+|++++|+|||||||||||++|+|+.. + .|..|+|.+.++++......
T Consensus 4 ~~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~-- 81 (253)
T PRK14242 4 PPKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD-- 81 (253)
T ss_pred CcEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC--
Confidence 356999999999998899999999999999999999999999999999999853 1 24678888777655321100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQG 315 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~ 315 (723)
...++..++++.+.... . ...+.+++..... .... .......++.++++.+|+.. ...+
T Consensus 82 ---------~~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 144 (253)
T PRK14242 82 ---------VVELRRRVGMVFQKPNP------F-PKSIFENVAYGLR-VNGVKDKAYLAERVERSLRHAALWDEVKDRLH 144 (253)
T ss_pred ---------HHHHhhcEEEEecCCCC------C-cCcHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHHcCCchhhhHHhh
Confidence 00122233333322111 0 1122333322111 1111 12234567888999999842 2346
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G 224 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMG 224 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999999876 469999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++. .|+.+++
T Consensus 225 ~i~~-~g~~~~~ 235 (253)
T PRK14242 225 KLIE-VGPTEQI 235 (253)
T ss_pred EEEE-eCCHHHH
Confidence 9964 4666554
No 245
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.3e-37 Score=322.70 Aligned_cols=206 Identities=24% Similarity=0.334 Sum_probs=161.0
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCC--CCCcceEEECCc------------ee
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDL--SPTEGEVRRSQK------------LR 561 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~--~p~~G~I~~~~~------------~~ 561 (723)
|+++||++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 468999999975 35899999999999999999999999999999999995 799999988763 12
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCCCC-----CC-CcHHHHHHHHHHhCCCCCCCCcCCCC-CCCHHHHHHHHHHH
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHPDQ-----EG-LSKQEAVRAKLGKFGLPSHNHLTPIA-KLSGGQKARVVFTS 632 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~L~~~gl~~~~~~~~i~-~LSGGqkqRv~lAr 632 (723)
++|++|.+. ..+++.++... ........ .. ....+.+..+++.+||......+++. .|||||||||+|||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~ 157 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRS-ALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQ 157 (243)
T ss_pred eEeeeccccccCCcCHHHHHHH-HHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHH
Confidence 788888742 22223222211 11111000 00 01134577899999997433345565 59999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHh-cCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRV-CDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~-~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
+|+.+|+||||||||++||+.++..+.++|.++. .|||+||||++++..+ || ++++|++|+++ ..|++++
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d-----~i~~l~~G~i~-~~g~~~~ 231 (243)
T TIGR01978 158 MALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPD-----YVHVLLDGRIV-KSGDVEL 231 (243)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCC-----eEEEEeCCEEE-EecCHHH
Confidence 9999999999999999999999999999998873 6899999999999988 74 99999999997 4678776
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 232 ~~ 233 (243)
T TIGR01978 232 AK 233 (243)
T ss_pred hc
Confidence 54
No 246
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=323.33 Aligned_cols=209 Identities=28% Similarity=0.318 Sum_probs=166.0
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~--------- 559 (723)
++|+++||++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 2 ~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 2 NKIEIRDLKVSFGQV--EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred ceEEEEeeEEEECCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 368999999999753 589999999999999999999999999999999999974 7999988763
Q ss_pred --eeEEEEccccc--cccCccccHHHHHHhhCCCCCC-CcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHH
Q 048654 560 --LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEG-LSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 --~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|... ...++.++.... ......... ....+.+.++++.+|+.. ...++++.+|||||||||+||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 158 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALG-LKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIA 158 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHH-HHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHH
Confidence 25899999742 223343332211 111110000 012345778999999853 123467799999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| +|++|++|+++. .|+++++
T Consensus 159 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~ 232 (250)
T PRK14247 159 RALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISD-----YVAFLYKGQIVE-WGPTREV 232 (250)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEECCeEEE-ECCHHHH
Confidence 99999999999999999999999999999998874 689999999999999995 999999999974 5888776
Q ss_pred HH
Q 048654 710 KE 711 (723)
Q Consensus 710 ~~ 711 (723)
..
T Consensus 233 ~~ 234 (250)
T PRK14247 233 FT 234 (250)
T ss_pred Hc
Confidence 43
No 247
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.2e-37 Score=322.38 Aligned_cols=206 Identities=22% Similarity=0.303 Sum_probs=164.7
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC----CcceEEECCc---------e
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP----TEGEVRRSQK---------L 560 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p----~~G~I~~~~~---------~ 560 (723)
.+|+++||+++| + ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+++. .
T Consensus 3 ~~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 79 (254)
T PRK10418 3 QQIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGR 79 (254)
T ss_pred cEEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccc
Confidence 378999999999 3 3589999999999999999999999999999999999999 9999988763 2
Q ss_pred eEEEEccccccccCccccHHHHH---HhhCCCCCCCcHHHHHHHHHHhCCCCCC--CCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 561 RIGRYSQHFVDLLTMEETPVSYL---LRLHPDQEGLSKQEAVRAKLGKFGLPSH--NHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 561 ~ig~~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~~gl~~~--~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
.++|++|.....+....+..... ...... ....+.+.++++.++|... ...+++.+|||||||||+|||||+
T Consensus 80 ~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~ 156 (254)
T PRK10418 80 KIATIMQNPRSAFNPLHTMHTHARETCLALGK---PADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALL 156 (254)
T ss_pred eEEEEecCCccccCccccHHHHHHHHHHHcCC---ChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHh
Confidence 48999997421111111211111 111111 0133567889999999752 224677999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| ++++|++|+++. .|+++++..
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d-----~v~~l~~G~i~~-~~~~~~~~~ 230 (254)
T PRK10418 157 CEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLAD-----DVAVMSHGRIVE-QGDVETLFN 230 (254)
T ss_pred cCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCC-----EEEEEECCEEEE-ecCHHHHhh
Confidence 999999999999999999999999999875 3589999999999999995 999999999974 577777643
No 248
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-37 Score=322.13 Aligned_cols=223 Identities=22% Similarity=0.294 Sum_probs=165.7
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~ 239 (723)
.++|+++|+++.|+++++|+|+||+|++|+++||+|+||||||||+++|+|+..+. |..|+|.+.++.+......
T Consensus 10 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~-- 87 (258)
T PRK14268 10 QPQIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD-- 87 (258)
T ss_pred ceeEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch--
Confidence 44799999999999889999999999999999999999999999999999987542 4678888776654321100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCC---ccccCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFT---KEMQGR 316 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~---~~~~~~ 316 (723)
...++..++++.+.... . ...+.+++..... ...........++.++++.+|+. ....++
T Consensus 88 ---------~~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK14268 88 ---------VVELRKNVGMVFQKPNP------F-PMSIYDNVAYGPR-IHGANKKDLDGVVENALRSAALWDETSDRLKS 150 (258)
T ss_pred ---------HHHHhhhEEEEecCCcc------C-cccHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCCCcchhhhhcC
Confidence 00112223333221110 0 1122233321111 11122223345688899999883 133478
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 151 ~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 230 (258)
T PRK14268 151 PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGE 230 (258)
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999865 4799999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++. .|..+++
T Consensus 231 i~~-~~~~~~~ 240 (258)
T PRK14268 231 LIE-FGQTRQI 240 (258)
T ss_pred EEE-eCCHHHH
Confidence 964 4666554
No 249
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-37 Score=323.35 Aligned_cols=209 Identities=24% Similarity=0.339 Sum_probs=164.7
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~-------- 559 (723)
.++|+++|+++.|++. .+|+||||+|.+||+++|+|+||||||||+++|+|+++| ++|+|++++.
T Consensus 5 ~~~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 5 EAIIETENLNLFYTDF--KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred CceEEEeeeEEEeCCc--eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 4589999999999753 589999999999999999999999999999999999997 4899987652
Q ss_pred -----eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|.... ..++.++.... .............+.+..+++.+++.. ...++++.+|||||||||+|
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~l 161 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYG-PKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCI 161 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHH
Confidence 248899987421 12333332111 111110000012345677888888731 12345679999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||+|+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ||++|++|+++. .|++++
T Consensus 162 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~ 235 (254)
T PRK14273 162 ARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISD-----RTAFFLNGCIEE-ESSTDE 235 (254)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHHH
Confidence 999999999999999999999999999999998874 689999999999999995 999999999974 578877
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 236 ~~ 237 (254)
T PRK14273 236 LF 237 (254)
T ss_pred HH
Confidence 64
No 250
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=327.76 Aligned_cols=223 Identities=22% Similarity=0.273 Sum_probs=164.3
Q ss_pred ceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCC-hHH
Q 048654 165 DITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDD-RSA 238 (723)
Q Consensus 165 ~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~-~~~ 238 (723)
.|+++|+++.|++ +++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.+..+.... ...
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~ 79 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHITPETGNKN 79 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECccccccch
Confidence 5889999999974 4799999999999999999999999999999999998755 5667777666543210 000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
....+..++++.+.... ......+.+++.... ............++.++++.+|+.....++++
T Consensus 80 ----------~~~~~~~ig~v~q~~~~-----~~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~ 143 (287)
T PRK13641 80 ----------LKKLRKKVSLVFQFPEA-----QLFENTVLKDVEFGP-KNFGFSEDEAKEKALKWLKKVGLSEDLISKSP 143 (287)
T ss_pred ----------HHHHHhceEEEEeChhh-----hhccchHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCCChhHhhCCc
Confidence 00111222332221100 000112223322111 11112234455678999999999634557999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i 223 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKL 223 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 57999999999999999999999999999
Q ss_pred EEecCChhhHH
Q 048654 396 HFYRGNFDDFE 406 (723)
Q Consensus 396 ~~~~g~~~~~~ 406 (723)
+. .|+.+++.
T Consensus 224 ~~-~g~~~~~~ 233 (287)
T PRK13641 224 IK-HASPKEIF 233 (287)
T ss_pred EE-eCCHHHHh
Confidence 64 57766553
No 251
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=321.06 Aligned_cols=219 Identities=21% Similarity=0.342 Sum_probs=162.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~------ 74 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDISLLPLHA------ 74 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCHHH------
Confidence 58999999999999999999999999999999999999999999999998654 4566666665543221110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
..+..++++.+.... .....+.+++.................++.++++.+|+.. ..++++.+||||
T Consensus 75 ------~~~~~i~~~~q~~~~------~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G 141 (241)
T PRK10895 75 ------RARRGIGYLPQEASI------FRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-LRDSMGQSLSGG 141 (241)
T ss_pred ------HHHhCeEEeccCCcc------cccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-HhhcchhhCCHH
Confidence 011122222221100 0011222222211100001112334567889999999964 457889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||++||+++++..+||+|++|++|+++. .|+
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~ 220 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIA-HGT 220 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEe-eCC
Confidence 999999999999999999999999999999999988888653 6799999999999999999999999999964 577
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
++++
T Consensus 221 ~~~~ 224 (241)
T PRK10895 221 PTEI 224 (241)
T ss_pred HHHH
Confidence 6655
No 252
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-37 Score=325.14 Aligned_cols=209 Identities=24% Similarity=0.334 Sum_probs=164.2
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
+.++|+++|+++.|++ ..+|+++||+|.+|++++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 18 ~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 95 (268)
T PRK14248 18 KEHILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNI 95 (268)
T ss_pred CCceEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccc
Confidence 4578999999999975 358999999999999999999999999999999999864 78999987652
Q ss_pred ------eeEEEEccccccccCccccHHHHHH---hhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHH
Q 048654 560 ------LRIGRYSQHFVDLLTMEETPVSYLL---RLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKAR 627 (723)
Q Consensus 560 ------~~ig~~~q~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqR 627 (723)
..++|++|.... +. .+....+. ..............+..++..+++.. ....+++.+||||||||
T Consensus 96 ~~~~~~~~i~~v~q~~~~-~~--~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 172 (268)
T PRK14248 96 NVVNLRREIGMVFQKPNP-FP--KSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQR 172 (268)
T ss_pred cHHHHhccEEEEecCCcc-Cc--ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHH
Confidence 248899987421 11 12222221 11111000011244677888888842 12246779999999999
Q ss_pred HHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCC
Q 048654 628 VVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGT 705 (723)
Q Consensus 628 v~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~ 705 (723)
|+|||||+.+|+||||||||+|||+.++..+.++|+++. .|||++|||++++..+|| +|++|++|+++. .|+
T Consensus 173 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d-----~v~~l~~G~i~~-~~~ 246 (268)
T PRK14248 173 LCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSD-----RTAFFLNGDLVE-YDQ 246 (268)
T ss_pred HHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCC-----EEEEEECCEEEE-eCC
Confidence 999999999999999999999999999999999998874 689999999999999995 999999999975 577
Q ss_pred HHHHHH
Q 048654 706 FEEYKE 711 (723)
Q Consensus 706 ~~~~~~ 711 (723)
++++..
T Consensus 247 ~~~~~~ 252 (268)
T PRK14248 247 TEQIFT 252 (268)
T ss_pred HHHHHh
Confidence 776643
No 253
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.7e-37 Score=324.07 Aligned_cols=205 Identities=22% Similarity=0.349 Sum_probs=162.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------------
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------------- 559 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------------- 559 (723)
|+++||++.|++ ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 468999999975 35899999999999999999999999999999999999999999987652
Q ss_pred --------eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHH
Q 048654 560 --------LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 --------~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|... ...++.++......... ..........+.++++.+|+.... ++.+.+|||||+|||+
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~ 156 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVL-GMARAEAEKRAMELLDMVGLADKA-DHMPAQLSGGQQQRVA 156 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCChhHh-hcChhhcCHHHHHHHH
Confidence 24788888642 12233333211100000 000001234577899999997544 4567899999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCC
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGT 705 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~ 705 (723)
|||||+.+|++|||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| ++++|++|+++. .|+
T Consensus 157 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~-~g~ 230 (252)
T TIGR03005 157 IARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFAD-----RVCFFDKGRIVE-QGK 230 (252)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcC-----EEEEEECCEEEE-eCC
Confidence 999999999999999999999999999999999875 4589999999999999995 999999999974 577
Q ss_pred HHHHH
Q 048654 706 FEEYK 710 (723)
Q Consensus 706 ~~~~~ 710 (723)
.+++.
T Consensus 231 ~~~~~ 235 (252)
T TIGR03005 231 PDEIF 235 (252)
T ss_pred HHHHh
Confidence 77664
No 254
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-37 Score=326.18 Aligned_cols=210 Identities=27% Similarity=0.343 Sum_probs=165.7
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------e
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------L 560 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~ 560 (723)
.+++|+++|+++.|++....+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 4 ~~~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (269)
T PRK13648 4 KNSIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRK 83 (269)
T ss_pred CCceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHh
Confidence 35689999999999753335899999999999999999999999999999999999999999998763 2
Q ss_pred eEEEEccccc---cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 561 RIGRYSQHFV---DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 561 ~ig~~~q~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
.++|++|+.. ...++.++. .+..... ..........+..+++.+++.+.. ++++.+|||||||||+|||||+.+
T Consensus 84 ~i~~v~q~~~~~~~~~~v~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~ 160 (269)
T PRK13648 84 HIGIVFQNPDNQFVGSIVKYDV-AFGLENH-AVPYDEMHRRVSEALKQVDMLERA-DYEPNALSGGQKQRVAIAGVLALN 160 (269)
T ss_pred heeEEEeChHHhcccccHHHHH-HhhHHhc-CCCHHHHHHHHHHHHHHcCCchhh-hCCcccCCHHHHHHHHHHHHHHcC
Confidence 4789998742 111222221 1111111 000001224577889999997544 456789999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++.. | |+|++|++|+|+. .|+++++.+
T Consensus 161 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~-----d~i~~l~~G~i~~-~g~~~~~~~ 231 (269)
T PRK13648 161 PSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-A-----DHVIVMNKGTVYK-EGTPTEIFD 231 (269)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-C-----CEEEEEECCEEEE-ecCHHHHhc
Confidence 9999999999999999999999999875 3589999999999974 7 4999999999974 578777643
No 255
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.6e-37 Score=331.00 Aligned_cols=208 Identities=25% Similarity=0.429 Sum_probs=158.4
Q ss_pred EEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHHHHH
Q 048654 173 VAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEELVKL 252 (723)
Q Consensus 173 ~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l 252 (723)
++|+++++|+|+||+|++|+++||+||||||||||+++|+|+..| ..|+|.+.+..+... .. .+
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~-~~-------------~~ 64 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVRE-PR-------------KV 64 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccC-HH-------------HH
Confidence 468888999999999999999999999999999999999998654 566777766654321 11 11
Q ss_pred HHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHHHHHHHH
Q 048654 253 REEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWRMRISLA 332 (723)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQRvaLA 332 (723)
+..++++.+.... .....+.+.+.. ...+..........++.++|+.+|+.. ..++++.+|||||||||+||
T Consensus 65 ~~~i~~~~q~~~~------~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~la 136 (302)
T TIGR01188 65 RRSIGIVPQYASV------DEDLTGRENLEM-MGRLYGLPKDEAEERAEELLELFELGE-AADRPVGTYSGGMRRRLDIA 136 (302)
T ss_pred HhhcEEecCCCCC------CCCCcHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHcCChh-HhCCchhhCCHHHHHHHHHH
Confidence 2334444322111 111123333322 111222223345567899999999974 45799999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChhhH
Q 048654 333 RALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 333 rAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~~~ 405 (723)
|||+.+|++|||||||+|||+.++.++.++|+++ +.|||++||+++++..+||+|++|++|+++. .|+.+++
T Consensus 137 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~l 211 (302)
T TIGR01188 137 ASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIA-EGTPEEL 211 (302)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 9999999999999999999999999999999865 5799999999999999999999999999974 5776554
No 256
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.5e-37 Score=317.49 Aligned_cols=216 Identities=26% Similarity=0.365 Sum_probs=154.7
Q ss_pred ceEEEeEEEEeCCe----eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 165 DITIDNFSVAARGK----ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 165 ~I~l~nls~~y~~~----~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
+|+++||+++|+++ ++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+..+.......
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~-- 76 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLLKLSRRL-- 76 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEccccchhh--
Confidence 37899999999865 899999999999999999999999999999999998755 4566766665543221100
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCc-hHHHHH-HHHHHHhCCCCccccCCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGS-DAAEAQ-ASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~-~~~~L~~lgl~~~~~~~~~ 318 (723)
...++..++++.+..... ......+.+++..... ...... ...... +.++++.+++.....++++
T Consensus 77 --------~~~~~~~i~~~~q~~~~~----~~~~~tv~~nl~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 77 --------RKIRRKEIQMVFQDPMSS----LNPRMTIGEQIAEPLR-IHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred --------HHHhhccEEEEecCchhh----cCCcCCHHHHHHHHHH-hccCCcHHHHHHHHHHHHHHHCCCChhHhhCCc
Confidence 001122223322211000 0001122222221111 111111 111222 3588999999534457899
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 144 ~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 223 (228)
T cd03257 144 HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGK 223 (228)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCE
Confidence 999999999999999999999999999999999999999999999764 5799999999999999999999999999
Q ss_pred EEE
Q 048654 395 LHF 397 (723)
Q Consensus 395 i~~ 397 (723)
++.
T Consensus 224 i~~ 226 (228)
T cd03257 224 IVE 226 (228)
T ss_pred EEe
Confidence 863
No 257
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=322.34 Aligned_cols=207 Identities=30% Similarity=0.405 Sum_probs=165.1
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce-----------eEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL-----------RIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~-----------~ig 563 (723)
+|+++|++++|++ ..+|++|||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.. .++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 2 TLRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 6899999999975 358999999999999999999999999999999999999999999887631 389
Q ss_pred EEccccc--cccCccccHHHHHHh---hCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 564 RYSQHFV--DLLTMEETPVSYLLR---LHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 564 ~~~q~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
|++|... ..+++.++....... .+... .......+..+++.+|+.... ++++.+|||||+|||+|||||+.+|
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p 157 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRL-SAEDNARVNQAMEQTRINHLA-DRRLTDLSGGQRQRAFLAMVLAQDT 157 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCC-CHHHHHHHHHHHHHcCCHHHH-cCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9998742 112222221100000 01100 011234577889999997544 4677999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
++|||||||+|||+.++..+.++|.++ +.|||+||||++++.++|| ++++|++|+++. .|+++++..
T Consensus 158 ~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~~ 227 (255)
T PRK11231 158 PVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCD-----HLVVLANGHVMA-QGTPEEVMT 227 (255)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcC-----EEEEEECCeEEE-EcCHHHhcC
Confidence 999999999999999999999999876 3689999999999999995 999999999974 577777643
No 258
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=325.62 Aligned_cols=220 Identities=23% Similarity=0.275 Sum_probs=162.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||+++|+++++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.+..+.......
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~------ 72 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLDYSKRGL------ 72 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcccccCCH------
Confidence 48899999999988999999999999999999999999999999999998654 4567777666542111100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
..++..++++.+.... ......+.+++..... ...........++.++++.+|+.. ..++++.+||||
T Consensus 73 -----~~~~~~i~~v~q~~~~-----~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG 140 (271)
T PRK13638 73 -----LALRQQVATVFQDPEQ-----QIFYTDIDSDIAFSLR-NLGVPEAEITRRVDEALTLVDAQH-FRHQPIQCLSHG 140 (271)
T ss_pred -----HHHHhheEEEeeChhh-----ccccccHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCCHh-HhcCCchhCCHH
Confidence 0111223332221000 0000011222211111 111122334456788999999964 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|.++ +.|||+||||++++..+||+|++|++|+++. .|+
T Consensus 141 ~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~ 219 (271)
T PRK13638 141 QKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILT-HGA 219 (271)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCC
Confidence 999999999999999999999999999999999999999865 5799999999999999999999999999974 476
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+++
T Consensus 220 ~~~~ 223 (271)
T PRK13638 220 PGEV 223 (271)
T ss_pred HHHH
Confidence 6554
No 259
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-37 Score=315.13 Aligned_cols=204 Identities=29% Similarity=0.384 Sum_probs=154.4
Q ss_pred eEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 166 ITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 166 I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+.++....
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~------ 72 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTGPG------ 72 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcccc------
Confidence 578999999987 7899999999999999999999999999999999998654 4566766665442110
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
..++++.+.... .....+.+++.... ............++.++++.+|+.+ ..++++.+|
T Consensus 73 ------------~~i~~v~q~~~~------~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 132 (220)
T cd03293 73 ------------PDRGYVFQQDAL------LPWLTVLDNVALGL-ELQGVPKAEARERAEELLELVGLSG-FENAYPHQL 132 (220)
T ss_pred ------------CcEEEEeccccc------ccCCCHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCChh-hhhCCcccC
Confidence 011111111000 00111222222111 1111222334567889999999974 457889999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEe--CCEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLH--DQKL 395 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~--~G~i 395 (723)
||||||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|+ +|++
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i 212 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRI 212 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEE
Confidence 999999999999999999999999999999999999999998754 5799999999999999999999999 7998
Q ss_pred EE
Q 048654 396 HF 397 (723)
Q Consensus 396 ~~ 397 (723)
+.
T Consensus 213 ~~ 214 (220)
T cd03293 213 VA 214 (220)
T ss_pred EE
Confidence 63
No 260
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-37 Score=314.12 Aligned_cols=205 Identities=21% Similarity=0.385 Sum_probs=156.6
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++.+|+|+||+|.+|++++|+|||||||||||++|+|+..| .+|+|.+.+..+..
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~------------ 66 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLDI------------ 66 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchhH------------
Confidence 5789999999989999999999999999999999999999999999998654 56667665543210
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
..+..++++.+.... .....+.+++... .............++.++++.+|+.. ..++++.+|||||
T Consensus 67 -----~~~~~i~~~~q~~~~------~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 133 (210)
T cd03269 67 -----AARNRIGYLPEERGL------YPKMKVIDQLVYL-AQLKGLKKEEARRRIDEWLERLELSE-YANKRVEELSKGN 133 (210)
T ss_pred -----HHHccEEEeccCCcC------CcCCcHHHHHHHH-HHHcCCChHHHHHHHHHHHHHcCChH-HHhCcHhhCCHHH
Confidence 011122222221110 0111222332211 11111222344567889999999974 4578899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++.
T Consensus 134 ~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 134 QQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 99999999999999999999999999999999999999865 5799999999999999999999999999864
No 261
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=326.33 Aligned_cols=208 Identities=28% Similarity=0.383 Sum_probs=165.1
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------ee
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LR 561 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ 561 (723)
.++|+++|+++.|++....+|++|||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 5 ~~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 5 SVMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred ceEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 4689999999999633346899999999999999999999999999999999999999999987652 24
Q ss_pred EEEEccccc---cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFV---DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|... ...++.++.... .... ..........+.++++.+||.... ++++.+|||||+|||+|||||+.+|
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~-~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFG-LENK-KVPPKKMKDIIDDLAKKVGMEDYL-DKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhH-HHHc-CCCHHHHHHHHHHHHHHcCCHHHh-hCCcccCCHHHHHHHHHHHHHHcCC
Confidence 789998742 123333332111 1111 010001223477889999997544 4667999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+||||||||+|||+.++..+.++|+++. .|||+||||++++. +| |+|++|++|+++. .|+++++.
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~-----d~v~~l~~G~i~~-~g~~~~~~ 230 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LA-----DKVIVFSEGKLIA-QGKPKEIL 230 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hC-----CEEEEEECCEEEE-ecCHHHHh
Confidence 9999999999999999999999998762 58999999999986 78 4999999999974 57776654
No 262
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-37 Score=321.63 Aligned_cols=223 Identities=21% Similarity=0.327 Sum_probs=164.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
.|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+..|.| .+|.|.+.+.++.......
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~--- 80 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP--- 80 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh---
Confidence 5899999999998999999999999999999999999999999999999876532 5788887776543111000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGRPT 318 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~ 318 (723)
..++..++++.+.... .....+.+++.................++.++++.+|+.. ...++++
T Consensus 81 --------~~~~~~i~~~~q~~~~------~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 146 (258)
T PRK14241 81 --------VAVRRTIGMVFQRPNP------FPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPG 146 (258)
T ss_pred --------HHHhcceEEEcccccc------CCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCc
Confidence 0111222332221100 0111223333221111011112334567888999999841 3457889
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEe-----
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLH----- 391 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~----- 391 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|+
T Consensus 147 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~ 226 (258)
T PRK14241 147 GGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATG 226 (258)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCC
Confidence 999999999999999999999999999999999999999999999875 4799999999999999999999997
Q ss_pred -CCEEEEecCChhhH
Q 048654 392 -DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 -~G~i~~~~g~~~~~ 405 (723)
+|+++. .|+.+++
T Consensus 227 ~~g~i~~-~~~~~~~ 240 (258)
T PRK14241 227 KPGRLVE-IDDTEKI 240 (258)
T ss_pred CCceEEe-cCCHHHH
Confidence 799974 4776655
No 263
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-37 Score=319.91 Aligned_cols=222 Identities=24% Similarity=0.289 Sum_probs=165.0
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++||++.|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..|. +..|+|.+.+.++.......
T Consensus 4 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~--- 80 (253)
T PRK14267 4 AIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP--- 80 (253)
T ss_pred eEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh---
Confidence 589999999999889999999999999999999999999999999999987653 35788887776553110000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc--CchHHHHHHHHHHHhCCCCc---cccCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL--GSDAAEAQASKILAGLGFTK---EMQGR 316 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~ 316 (723)
..++..++++.+.... .....+.+++..... .... .......++.++++.+|+.. ...++
T Consensus 81 --------~~~~~~i~~~~q~~~~------~~~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14267 81 --------IEVRREVGMVFQYPNP------FPHLTIYDNVAIGVK-LNGLVKSKKELDERVEWALKKAALWDEVKDRLND 145 (253)
T ss_pred --------HHHhhceeEEecCCcc------CCCCcHHHHHHHHHH-hcCccCCHHHHHHHHHHHHHHcCCccchhhhhcc
Confidence 0112223333221110 011122333322111 1111 12234456788999998742 23468
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 146 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 225 (253)
T PRK14267 146 YPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGK 225 (253)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999875 4799999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++. .|+.+++
T Consensus 226 i~~-~~~~~~~ 235 (253)
T PRK14267 226 LIE-VGPTRKV 235 (253)
T ss_pred EEE-eCCHHHH
Confidence 974 4666554
No 264
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-37 Score=323.95 Aligned_cols=208 Identities=27% Similarity=0.346 Sum_probs=166.9
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------ee
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LR 561 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ 561 (723)
..+|+++||+++|++. .+|++|||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..
T Consensus 5 ~~~l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 5 VARLRGEQLTLGYGKY--TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred ccEEEEEEEEEEECCE--EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 3579999999999853 5899999999999999999999999999999999999999999998763 24
Q ss_pred EEEEccccccccCccccHHHHHHhh-CCC---C--CCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 562 IGRYSQHFVDLLTMEETPVSYLLRL-HPD---Q--EGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 562 ig~~~q~~~~~~~~~~~~~~~~~~~-~~~---~--~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
++|++|+..-. ...+....+... ... . ........+..+++.+||.... ++++.+|||||||||+|||||+
T Consensus 83 i~~v~q~~~~~--~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrv~laral~ 159 (265)
T PRK10253 83 IGLLAQNATTP--GDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLA-DQSVDTLSGGQRQRAWIAMVLA 159 (265)
T ss_pred eEEeeccCcCC--CCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-cCCcccCChHHHHHHHHHHHHh
Confidence 89999974211 111222222110 010 0 0001234577899999997544 4678999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
.+|++|||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++. .|+++++..
T Consensus 160 ~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~~ 233 (265)
T PRK10253 160 QETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYAS-----HLIALREGKIVA-QGAPKEIVT 233 (265)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHhh
Confidence 999999999999999999999999999876 3589999999999999995 999999999974 578877643
No 265
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.4e-37 Score=314.45 Aligned_cols=210 Identities=27% Similarity=0.378 Sum_probs=155.2
Q ss_pred eEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 166 ITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 166 I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
|+++||++.|++ +++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|+|.+.+.++.......
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~--- 76 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLSKLSSNE--- 76 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhhhcCHhH---
Confidence 789999999974 5799999999999999999999999999999999998755 4566766665543221110
Q ss_pred HHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 242 VVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 242 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
...++ ..++++.+.... .....+.+++.... .+..........++.++++.+|+.. ..++++.+
T Consensus 77 -------~~~~~~~~i~~v~q~~~~------~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~ 141 (221)
T TIGR02211 77 -------RAKLRNKKLGFIYQFHHL------LPDFTALENVAMPL-LIGKKSVKEAKERAYEMLEKVGLEH-RINHRPSE 141 (221)
T ss_pred -------HHHHHHhcEEEEeccccc------CCCCcHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCChh-hhhCChhh
Confidence 00111 223333221111 00112223222111 1111222334567889999999974 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++.. ||+|++|++|+++
T Consensus 142 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 142 LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 9999999999999999999999999999999999999999998754 5799999999999975 8999999999874
No 266
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-37 Score=321.56 Aligned_cols=225 Identities=21% Similarity=0.268 Sum_probs=166.4
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~ 238 (723)
....|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..+ .|..|+|.+.+..+......
T Consensus 10 ~~~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~- 88 (260)
T PRK10744 10 APSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD- 88 (260)
T ss_pred CCceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc-
Confidence 34469999999999988999999999999999999999999999999999998652 14678888777655311100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQG 315 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~ 315 (723)
...++..++++.+.... . ...+.+++.................++.++++.+|+.. ...+
T Consensus 89 ----------~~~~~~~i~~~~q~~~~------~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (260)
T PRK10744 89 ----------IALLRAKVGMVFQKPTP------F-PMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLH 151 (260)
T ss_pred ----------hHHHhcceEEEecCCcc------C-cCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHh
Confidence 01122233333221110 0 11222222211111111222334567889999999742 2346
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 231 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLG 231 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999999876 469999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++. .|+.+++
T Consensus 232 ~i~~-~g~~~~~ 242 (260)
T PRK10744 232 ELIE-FGNTDTI 242 (260)
T ss_pred EEEE-eCCHHHH
Confidence 9975 4666554
No 267
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-37 Score=321.91 Aligned_cols=224 Identities=23% Similarity=0.286 Sum_probs=167.0
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~ 238 (723)
....|+++||++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..| .|..|+|.+.++.+......
T Consensus 16 ~~~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~- 94 (267)
T PRK14235 16 TEIKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLD- 94 (267)
T ss_pred CCceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccc-
Confidence 34469999999999999999999999999999999999999999999999998764 24678888777655321100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc--CchHHHHHHHHHHHhCCCCc---cc
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL--GSDAAEAQASKILAGLGFTK---EM 313 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~ 313 (723)
...++..++++.+.... . ...+.+++.... ..... .......++.++++.+|+.. ..
T Consensus 95 ----------~~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 156 (267)
T PRK14235 95 ----------VVELRARVGMVFQKPNP------F-PKSIYENVAYGP-RIHGLARSKAELDEIVETSLRKAGLWEEVKDR 156 (267)
T ss_pred ----------hHHHhhceEEEecCCCC------C-CCcHHHHHHHHH-HhcccccchHHHHHHHHHHHHHcCCchhhhHH
Confidence 00122233333322111 0 012223332111 11111 12234567889999999953 23
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEe
Q 048654 314 QGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLH 391 (723)
Q Consensus 314 ~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~ 391 (723)
.++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|+
T Consensus 157 ~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~ 236 (267)
T PRK14235 157 LHEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFH 236 (267)
T ss_pred hhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEE
Confidence 46789999999999999999999999999999999999999999999999865 4699999999999999999999999
Q ss_pred CCEEEEecCChhhH
Q 048654 392 DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 ~G~i~~~~g~~~~~ 405 (723)
+|+++. .|+.+++
T Consensus 237 ~G~i~~-~g~~~~~ 249 (267)
T PRK14235 237 LGNLVE-VGDTEKM 249 (267)
T ss_pred CCEEEE-eCCHHHH
Confidence 999974 4666554
No 268
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=343.71 Aligned_cols=226 Identities=26% Similarity=0.343 Sum_probs=172.2
Q ss_pred CccceEEEeEEEEeCC-----------eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeee
Q 048654 162 NVKDITIDNFSVAARG-----------KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQE 230 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~-----------~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~ 230 (723)
..+.++++||++.|.. ..+++||||+|.+||++||||+||||||||.|+|+|+..| ..|.|.+.+++
T Consensus 277 ~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~ 354 (539)
T COG1123 277 AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQD 354 (539)
T ss_pred cCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcc
Confidence 4567889999999973 3689999999999999999999999999999999998765 56677777766
Q ss_pred ecCCChHHHHHHHHhhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCC
Q 048654 231 VVGDDRSAIQAVVSAHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGF 309 (723)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl 309 (723)
...... +...++..+.++ ++.... ......+.+.+.+...........+..+++.++|+.+|+
T Consensus 355 -~~~~~~----------~~~~~r~~~QmvFQdp~~S-----LnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL 418 (539)
T COG1123 355 -LDLTGG----------ELRRLRRRIQMVFQDPYSS-----LNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGL 418 (539)
T ss_pred -cccccc----------hhhhhhhheEEEEeCcccc-----cCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCC
Confidence 211111 111223333332 222111 122234444444433322222234556789999999999
Q ss_pred CccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCcEEEEEeCCHHHHHhhCC
Q 048654 310 TKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR----WKKTLVVVSHDRDFLNTVCT 385 (723)
Q Consensus 310 ~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~----~~~TVIivsHdl~~l~~iad 385 (723)
.....++++++|||||||||+|||||+.+|+|||+||||++||+..+..+.++|.+ ++.|.||||||+.++..+||
T Consensus 419 ~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~d 498 (539)
T COG1123 419 PPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIAD 498 (539)
T ss_pred CHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCc
Confidence 97777999999999999999999999999999999999999999999988888864 47899999999999999999
Q ss_pred EEEEEeCCEEEEecCChhhHH
Q 048654 386 EIIHLHDQKLHFYRGNFDDFE 406 (723)
Q Consensus 386 ~Ii~L~~G~i~~~~g~~~~~~ 406 (723)
||++|++|+|+.. |+.+...
T Consensus 499 rv~vm~~G~iVE~-G~~~~v~ 518 (539)
T COG1123 499 RVAVMYDGRIVEE-GPTEKVF 518 (539)
T ss_pred eEEEEECCeEEEe-CCHHHHh
Confidence 9999999999865 6765543
No 269
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-37 Score=327.05 Aligned_cols=205 Identities=28% Similarity=0.354 Sum_probs=162.4
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRI 562 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~i 562 (723)
||+++||++.|++. ..+|+||||+|++|++++|+|||||||||||++|+|+++|++|+|++++. ..+
T Consensus 1 ml~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 1 MIRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred CEEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 57899999999632 34899999999999999999999999999999999999999999987653 237
Q ss_pred EEEcccccc---ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 563 GRYSQHFVD---LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 563 g~~~q~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
+|++|.+.. ..++.++.. +....+ ........+.+..+++.+||.... ++++..|||||||||+|||||+.+|+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~-~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~laral~~~p~ 156 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLA-FGPENL-CLPPIEIRKRVDRALAEIGLEKYR-HRSPKTLSGGQGQCVALAGILTMEPE 156 (274)
T ss_pred EEEEEChhhhcccchHHHHHH-hhHHHc-CCCHHHHHHHHHHHHHHCCCHHHh-cCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 899987421 123322221 111111 000001234577889999997544 46779999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||||||||+|||+.++..+.++|+++ +.|||++|||++++. .| |+|++|++|+++. .|+++++.
T Consensus 157 lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~-----d~v~~l~~G~i~~-~g~~~~~~ 223 (274)
T PRK13644 157 CLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DA-----DRIIVMDRGKIVL-EGEPENVL 223 (274)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hC-----CEEEEEECCEEEE-ECCHHHHh
Confidence 99999999999999999999999876 359999999999984 58 4999999999974 57777653
No 270
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-37 Score=322.63 Aligned_cols=209 Identities=24% Similarity=0.336 Sum_probs=164.9
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~------- 559 (723)
..++|+++|+++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 9 ~~~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 86 (258)
T PRK14268 9 AQPQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDV 86 (258)
T ss_pred cceeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccc
Confidence 4568999999999975 3589999999999999999999999999999999999985 7999987552
Q ss_pred ------eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 560 ------LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ------~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|.... ..++.++.. +...... .........+..+++.+++.. ....+++.+|||||+|||+
T Consensus 87 ~~~~~~~~i~~v~q~~~~~~~tv~enl~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 164 (258)
T PRK14268 87 DVVELRKNVGMVFQKPNPFPMSIYDNVA-YGPRIHG-ANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLC 164 (258)
T ss_pred hHHHHhhhEEEEecCCccCcccHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHH
Confidence 137899886421 123333321 1111111 100011235678899998842 2234677999999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++.++|| +|++|++|+|+. .|+++
T Consensus 165 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~ 238 (258)
T PRK14268 165 IARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISD-----YTGFFLMGELIE-FGQTR 238 (258)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCC-----EEEEEECCEEEE-eCCHH
Confidence 9999999999999999999999999999999998874 689999999999999995 999999999974 57887
Q ss_pred HHH
Q 048654 708 EYK 710 (723)
Q Consensus 708 ~~~ 710 (723)
++.
T Consensus 239 ~~~ 241 (258)
T PRK14268 239 QIF 241 (258)
T ss_pred HHh
Confidence 764
No 271
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.2e-37 Score=323.99 Aligned_cols=209 Identities=26% Similarity=0.393 Sum_probs=164.8
Q ss_pred CeEEEEEEEEEcCC-------CcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------
Q 048654 494 PLLQLIEVSFSYPN-------REDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~-------~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------- 559 (723)
++|+++||++.|++ ....+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~ 81 (268)
T PRK10419 2 TLLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNR 81 (268)
T ss_pred ceEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccCh
Confidence 47999999999973 1246899999999999999999999999999999999999999999987663
Q ss_pred -------eeEEEEccccccc----cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHH
Q 048654 560 -------LRIGRYSQHFVDL----LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 560 -------~~ig~~~q~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv 628 (723)
..++|++|..... .++.++.... ...+...........+.++++.+|+......+++..|||||||||
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl 160 (268)
T PRK10419 82 AQRKAFRRDIQMVFQDSISAVNPRKTVREIIREP-LRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRV 160 (268)
T ss_pred hHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHH-HHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHH
Confidence 2488999874211 2222221111 111111100012345788999999964334467799999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCC
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPG 704 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g 704 (723)
+|||||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++. .|
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d-----~i~~l~~G~i~~-~g 234 (268)
T PRK10419 161 CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQ-----RVMVMDNGQIVE-TQ 234 (268)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCC-----EEEEEECCEEee-eC
Confidence 9999999999999999999999999999999998775 4589999999999999995 999999999974 57
Q ss_pred CHHHH
Q 048654 705 TFEEY 709 (723)
Q Consensus 705 ~~~~~ 709 (723)
+++++
T Consensus 235 ~~~~~ 239 (268)
T PRK10419 235 PVGDK 239 (268)
T ss_pred Chhhc
Confidence 76654
No 272
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.4e-37 Score=322.54 Aligned_cols=207 Identities=32% Similarity=0.426 Sum_probs=165.0
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 2 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGGR--LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 5789999999753 5899999999999999999999999999999999999999999998763 14889
Q ss_pred Eccccc--cccCccccHHHHHHhhCC--CCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 565 YSQHFV--DLLTMEETPVSYLLRLHP--DQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 565 ~~q~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
++|.+. ...++.++.......... ..........+.++++.+++.... ++++.+|||||+|||+|||||+.+|+|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~l 158 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-DRDMSTLSGGERQRVHVARALAQEPKL 158 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 998752 112233322110000000 000001234578899999997544 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++. .|+.+++..
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~~ 226 (256)
T TIGR03873 159 LLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCD-----HVVVLDGGRVVA-AGPPREVLT 226 (256)
T ss_pred EEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCCEEE-ecCHHHhhC
Confidence 9999999999999999999999887 3689999999999999995 999999999974 588877643
No 273
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=336.46 Aligned_cols=218 Identities=24% Similarity=0.323 Sum_probs=167.3
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
..+|+++|+++.|++.++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+..+.....
T Consensus 17 ~~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~~~~~------ 88 (377)
T PRK11607 17 TPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDLSHVPP------ 88 (377)
T ss_pred CceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECCCCCH------
Confidence 4469999999999998999999999999999999999999999999999998754 56677776665532111
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
.+..++++.+.... .....+.+++..... .......+...++.++++.+|+.+ ..++++.+||
T Consensus 89 ---------~~r~ig~vfQ~~~l------fp~ltv~eNi~~~l~-~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~~~LS 151 (377)
T PRK11607 89 ---------YQRPINMMFQSYAL------FPHMTVEQNIAFGLK-QDKLPKAEIASRVNEMLGLVHMQE-FAKRKPHQLS 151 (377)
T ss_pred ---------HHCCEEEEeCCCcc------CCCCCHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCC
Confidence 01122332221110 112233444433221 112233455678899999999974 5689999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLC----RWKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~----~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||+|||||+.+|+||||||||++||+..+.++.+.|+ +.+.|+|+||||++++..+||+|++|++|+++.
T Consensus 152 gGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~- 230 (377)
T PRK11607 152 GGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQ- 230 (377)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEE-
Confidence 999999999999999999999999999999999988876654 347899999999999999999999999999975
Q ss_pred cCChhhHH
Q 048654 399 RGNFDDFE 406 (723)
Q Consensus 399 ~g~~~~~~ 406 (723)
.|+..++.
T Consensus 231 ~g~~~~~~ 238 (377)
T PRK11607 231 IGEPEEIY 238 (377)
T ss_pred EcCHHHHH
Confidence 47766553
No 274
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-37 Score=321.56 Aligned_cols=208 Identities=28% Similarity=0.317 Sum_probs=164.3
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~--------- 559 (723)
++|+++||++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 3 FAIETVNLRVYYGSN--HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred ceEEEEeEEEEeCCe--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 479999999999753 589999999999999999999999999999999999987 4999987652
Q ss_pred ----eeEEEEccccc--cccCccccHHHHHHhhCCCC-CCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 560 ----LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQ-EGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ----~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|... ..+++.++.... ....... ........+..+++.+++.. ....+++.+|||||||||+
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 159 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIG-VKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLV 159 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHH-HHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHH
Confidence 24789998642 223333332211 1111100 00011245678889998842 1234567899999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|+++
T Consensus 160 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~ 233 (253)
T PRK14267 160 IARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSD-----YVAFLYLGKLIE-VGPTR 233 (253)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCC-----EEEEEECCEEEE-eCCHH
Confidence 9999999999999999999999999999999998874 689999999999999995 999999999974 57887
Q ss_pred HHH
Q 048654 708 EYK 710 (723)
Q Consensus 708 ~~~ 710 (723)
++.
T Consensus 234 ~~~ 236 (253)
T PRK14267 234 KVF 236 (253)
T ss_pred HHH
Confidence 764
No 275
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=327.28 Aligned_cols=208 Identities=27% Similarity=0.402 Sum_probs=165.3
Q ss_pred CeEEEEEEEEEcCCC----cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------
Q 048654 494 PLLQLIEVSFSYPNR----EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~----~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------- 559 (723)
++|+++|++++|++. ...+|+||||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 589999999999742 235899999999999999999999999999999999999999999987652
Q ss_pred --eeEEEEccccccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 560 --LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 560 --~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral 634 (723)
..++|++|.+...+. ..+....+ .+.....+.. ....+..+++.+||.... .+++.+|||||||||+|||||
T Consensus 83 ~~~~i~~v~q~~~~~~~-~~~v~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LS~G~~qrv~laral 159 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIV-ATIVEEDV-AFGPENLGIPPEEIRERVDESLKKVGMYEYR-RHAPHLLSGGQKQRVAIAGIL 159 (280)
T ss_pred HhhheEEEecChhhhhc-cccHHHHH-HhhHhhcCCCHHHHHHHHHHHHHHCCCHhHh-hCCcccCCHHHHHHHHHHHHH
Confidence 247899987421111 11222211 1111101111 234578899999997554 467799999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+.+|+||||||||+|||+.++..|.++|.++ +.|||+||||++++.. | |++++|++|+|+. .|+++++.
T Consensus 160 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~-----d~v~~l~~G~i~~-~g~~~~~~ 232 (280)
T PRK13633 160 AMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-A-----DRIIVMDSGKVVM-EGTPKEIF 232 (280)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-C-----CEEEEEECCEEEE-ecCHHHHh
Confidence 9999999999999999999999999999876 3589999999999975 8 4999999999974 58887764
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
.
T Consensus 233 ~ 233 (280)
T PRK13633 233 K 233 (280)
T ss_pred c
Confidence 3
No 276
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=6.9e-37 Score=320.57 Aligned_cols=225 Identities=21% Similarity=0.283 Sum_probs=162.2
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeee-----ecCCChHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQE-----VVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~-----~~~~~~~~~ 239 (723)
+|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+.. +........
T Consensus 6 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccccccccccCCHHHH
Confidence 59999999999988999999999999999999999999999999999998755 45566666554 322111100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
. ...+..++++.+..... ........+.+...+.............++.++++.+|+.....++.+.
T Consensus 84 ~---------~~~~~~i~~v~q~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK11701 84 R---------RLLRTEWGFVHQHPRDG----LRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPT 150 (258)
T ss_pred H---------HHhhcceEEEeeCcccc----cCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCc
Confidence 0 00112233332211000 0000111122211111111111123456788999999996434578999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+|||||||||+|||||+.+|+||||||||++||+.++.+|.+.|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 151 ~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i 230 (258)
T PRK11701 151 TFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRV 230 (258)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999988653 67999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+ +.|+.+++
T Consensus 231 ~-~~~~~~~~ 239 (258)
T PRK11701 231 V-ESGLTDQV 239 (258)
T ss_pred E-EeCCHHHH
Confidence 6 45666554
No 277
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-37 Score=319.97 Aligned_cols=223 Identities=20% Similarity=0.286 Sum_probs=164.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..+. |..|+|.+.+..+.......
T Consensus 4 ~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~--- 80 (252)
T PRK14256 4 KVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP--- 80 (252)
T ss_pred EEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh---
Confidence 489999999999889999999999999999999999999999999999986422 34688887776553211000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGRPT 318 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~ 318 (723)
..++..++++.+.... .....+.+++...+.............++.++++.+|+.. ...++.+
T Consensus 81 --------~~~~~~i~~~~q~~~~------~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 146 (252)
T PRK14256 81 --------VSIRRRVGMVFQKPNP------FPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNA 146 (252)
T ss_pred --------HHhhccEEEEecCCCC------CCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCc
Confidence 0112223333221110 1111223333221111111122334567888999999853 2346789
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||++++|++|+++
T Consensus 147 ~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T PRK14256 147 MELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLV 226 (252)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999999876 579999999999999999999999999997
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+.+++
T Consensus 227 ~-~~~~~~~ 234 (252)
T PRK14256 227 E-CGETKKI 234 (252)
T ss_pred E-eCCHHHH
Confidence 5 4666554
No 278
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=318.40 Aligned_cols=205 Identities=29% Similarity=0.430 Sum_probs=163.7
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRY 565 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~ 565 (723)
||+++||+++|++. ..+|||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 ~l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 76 (232)
T PRK10771 1 MLKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSML 76 (232)
T ss_pred CeEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEE
Confidence 57899999999742 24999999999999999999999999999999999999999998763 248899
Q ss_pred ccccccccCccccHHHHHHh-hCCCCC-CCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEe
Q 048654 566 SQHFVDLLTMEETPVSYLLR-LHPDQE-GLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLL 643 (723)
Q Consensus 566 ~q~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlL 643 (723)
+|... +....+..+.+.. ...... .......+.++++.+|+... .++++.+|||||||||+||||++.+|++|||
T Consensus 77 ~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrv~laral~~~p~lllL 153 (232)
T PRK10771 77 FQENN--LFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDL-LARLPGQLSGGQRQRVALARCLVREQPILLL 153 (232)
T ss_pred ecccc--cccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHH-HhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 98642 1111122222211 111100 01123457889999999754 3467799999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 644 DEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 644 DEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+++ +.|+++++...
T Consensus 154 DEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~g~i~-~~g~~~~~~~~ 220 (232)
T PRK10771 154 DEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAP-----RSLVVADGRIA-WDGPTDELLSG 220 (232)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC-----EEEEEECCEEE-EeCCHHHHHhC
Confidence 9999999999999999999875 3589999999999999995 99999999997 46888877643
No 279
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=326.70 Aligned_cols=208 Identities=26% Similarity=0.389 Sum_probs=165.6
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCc---ceEEECCc----------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTE---GEVRRSQK---------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~---G~I~~~~~---------- 559 (723)
+.+|+++|+++.|++....+|++|||+|.+|++++|+||||||||||+++|+|+++|++ |+|.+++.
T Consensus 3 ~~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 3 DNIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred CceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 46899999999997533358999999999999999999999999999999999999987 89987663
Q ss_pred -eeEEEEccccc---cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 560 -LRIGRYSQHFV---DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 560 -~~ig~~~q~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
..++|++|.+. ...++.++.. +..... ........+.+.++++.|||.... ++++..|||||+|||+|||||+
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~-~~~~~~-~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LS~G~~qrv~laral~ 159 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVA-FGLENR-AVPRPEMIKIVRDVLADVGMLDYI-DSEPANLSGGQKQRVAIAGILA 159 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHH-hhHHhC-CCCHHHHHHHHHHHHHHCCChhHh-cCCcccCCHHHHHHHHHHHHHH
Confidence 24899998742 2233333321 111111 100001124577899999997644 4667999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++. +|| ++++|++|+++. .|+++++.
T Consensus 160 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d-----~i~~l~~G~i~~-~g~~~~~~ 231 (282)
T PRK13640 160 VEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MAD-----QVLVLDDGKLLA-QGSPVEIF 231 (282)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCC-----EEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999876 358999999999985 784 999999999985 57777654
No 280
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.7e-37 Score=315.12 Aligned_cols=215 Identities=20% Similarity=0.288 Sum_probs=158.7
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++||+++|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+...+....
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~------ 72 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITGLPPHER------ 72 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCCCCHHHH------
Confidence 5789999999988999999999999999999999999999999999998754 45667776665432221100
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhC-CCCccccCCCCCCCChH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGL-GFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~l-gl~~~~~~~~~~~LSGG 324 (723)
.+..++++.+.... .....+.+++..... .........++.++++.+ ++.. ..++++.+||||
T Consensus 73 ------~~~~i~~~~q~~~~------~~~~t~~~~l~~~~~---~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~LS~G 136 (222)
T cd03224 73 ------ARAGIGYVPEGRRI------FPELTVEENLLLGAY---ARRRAKRKARLERVYELFPRLKE-RRKQLAGTLSGG 136 (222)
T ss_pred ------HhcCeEEecccccc------CCCCcHHHHHHHHhh---hcCchhHHHHHHHHHHHHHhhhh-hhhCchhhCCHH
Confidence 01112222221100 011122232221111 111223345677788888 5653 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
|||||+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++. .|+
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~ 215 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVL-EGT 215 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEE-eCC
Confidence 999999999999999999999999999999999999999765 5799999999999999999999999999963 466
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+++
T Consensus 216 ~~~~ 219 (222)
T cd03224 216 AAEL 219 (222)
T ss_pred HHHH
Confidence 5443
No 281
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-37 Score=323.80 Aligned_cols=222 Identities=23% Similarity=0.347 Sum_probs=165.6
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++|++++|+ ++++|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+......
T Consensus 5 ~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~~~~~~~~------ 76 (283)
T PRK13636 5 ILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKPIDYSRKG------ 76 (283)
T ss_pred eEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEECCCCcch------
Confidence 599999999996 57899999999999999999999999999999999998654 556777766654211110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
...++..++++.+.... ......+.+++...... ..........++..+++.+|+. ...++++.+|||
T Consensus 77 -----~~~~~~~ig~v~q~~~~-----~~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~ 144 (283)
T PRK13636 77 -----LMKLRESVGMVFQDPDN-----QLFSASVYQDVSFGAVN-LKLPEDEVRKRVDNALKRTGIE-HLKDKPTHCLSF 144 (283)
T ss_pred -----HHHHHhhEEEEecCcch-----hhccccHHHHHHhHHHH-cCCCHHHHHHHHHHHHHHCCCh-hhhhCCcccCCH
Confidence 01122223333221100 00011222322211111 1122334456789999999997 456899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
|||||++|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++ +.
T Consensus 145 G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~-~~ 223 (283)
T PRK13636 145 GQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVI-LQ 223 (283)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-Ee
Confidence 9999999999999999999999999999999999998888754 579999999999999999999999999996 45
Q ss_pred CChhhHHh
Q 048654 400 GNFDDFES 407 (723)
Q Consensus 400 g~~~~~~~ 407 (723)
|+++++..
T Consensus 224 g~~~~~~~ 231 (283)
T PRK13636 224 GNPKEVFA 231 (283)
T ss_pred CCHHHHhc
Confidence 88776643
No 282
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=7.9e-38 Score=297.85 Aligned_cols=203 Identities=31% Similarity=0.452 Sum_probs=166.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce---------eEEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL---------RIGRY 565 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~---------~ig~~ 565 (723)
+|.+++|.++|+.. --.++++|..||++||+||+||||||||++|+|+..|.+|+|++++.. .++.+
T Consensus 1 ~l~L~~V~~~y~~~----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 1 MLALDDVRFSYGHL----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred CccccceEEeeCcc----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 46788999999743 236899999999999999999999999999999999999999988742 36677
Q ss_pred ccc--cccccCccccHHHHHHhhCCCCC-CCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 566 SQH--FVDLLTMEETPVSYLLRLHPDQE-GLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 566 ~q~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
+|. .+.++++.+|+- +...|... ....++.+..++.++||.+... +.+.+|||||||||+|||+|+++-+|||
T Consensus 77 FQEnNLFaHLtV~qNig---LGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~-RLP~~LSGGqRQRvALARclvR~~PilL 152 (231)
T COG3840 77 FQENNLFAHLTVAQNIG---LGLSPGLKLNAEQREKVEAAAAQVGLAGFLK-RLPGELSGGQRQRVALARCLVREQPILL 152 (231)
T ss_pred hhccccchhhhhhhhhc---ccCCcccccCHHHHHHHHHHHHHhChhhHhh-hCccccCchHHHHHHHHHHHhccCCeEE
Confidence 774 445566665532 22223221 1124567889999999988775 5558999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEFT----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~~----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
||||++.|||.-+..+..++.++. .|++||||..+.+.++++ +++++++|+|. +.|..+++..
T Consensus 153 LDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~-----~~~fl~~Gri~-~~g~~~~~~~ 219 (231)
T COG3840 153 LDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIAD-----RVVFLDNGRIA-AQGSTQELLS 219 (231)
T ss_pred ecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhh-----ceEEEeCCEEE-eeccHHHHhc
Confidence 999999999999999998887764 599999999999999984 99999999996 6677776543
No 283
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2e-37 Score=337.57 Aligned_cols=197 Identities=26% Similarity=0.352 Sum_probs=159.6
Q ss_pred EcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------eeEEEEccc
Q 048654 504 SYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------------LRIGRYSQH 568 (723)
Q Consensus 504 ~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------------~~ig~~~q~ 568 (723)
.|++ ..+|+|+||+|.+||+++|+|||||||||||++|+|+++|++|+|++++. ..++|++|.
T Consensus 2 ~~~~--~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~ 79 (363)
T TIGR01186 2 KTGG--KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQ 79 (363)
T ss_pred ccCC--ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECC
Confidence 4654 34899999999999999999999999999999999999999999998762 358999997
Q ss_pred cc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccC
Q 048654 569 FV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEP 646 (723)
Q Consensus 569 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEP 646 (723)
+. ..+++.++.. +....... ......+.+.++|+.+||.... ++++.+|||||||||+|||||+.+|+|||||||
T Consensus 80 ~~l~~~~TV~eNi~-~~~~~~~~-~~~~~~~~~~~~l~~vgL~~~~-~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP 156 (363)
T TIGR01186 80 FALFPHMTILQNTS-LGPELLGW-PEQERKEKALELLKLVGLEEYE-HRYPDELSGGMQQRVGLARALAAEPDILLMDEA 156 (363)
T ss_pred CcCCCCCCHHHHHH-HHHHHcCC-CHHHHHHHHHHHHHhcCCchhh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 43 3344544432 11111110 0001235678899999997654 466799999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 647 TNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 647 T~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|++||+.++..+.+.|.++ +.|||+||||++++..+|| +|++|++|+|+. .|+++++..
T Consensus 157 ~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~d-----rI~vl~~G~iv~-~g~~~ei~~ 219 (363)
T TIGR01186 157 FSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGD-----RIVIMKAGEIVQ-VGTPDEILR 219 (363)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEeCCEEEe-eCCHHHHHh
Confidence 9999999999999998765 4699999999999999995 999999999975 588887643
No 284
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-37 Score=319.29 Aligned_cols=219 Identities=26% Similarity=0.311 Sum_probs=165.1
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC-CCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP-VPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~-~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+ .|..|+|.+.++++...+..
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~------ 75 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV------ 75 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH------
Confidence 58999999999999999999999999999999999999999999999998643 45678888777665322111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc--CchHHHHHHHHHHHhCCCCc---cccCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL--GSDAAEAQASKILAGLGFTK---EMQGRPT 318 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~~~ 318 (723)
.++..++++.+.... . ...+.+++.... .+... .......++.++++.+|+.+ ...++.+
T Consensus 76 -------~~~~~i~~~~q~~~l------~-~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 140 (246)
T PRK14269 76 -------ALRKNVGMVFQQPNV------F-VKSIYENISYAP-KLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNA 140 (246)
T ss_pred -------HHhhhEEEEecCCcc------c-cccHHHHhhhHH-hhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCc
Confidence 112233333222111 0 112222222111 11111 11234556788999999952 2346788
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+|||+++++..+||+|++|++|+++
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~ 220 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELI 220 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999999865 679999999999999999999999999997
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+..++
T Consensus 221 ~-~g~~~~~ 228 (246)
T PRK14269 221 E-FGESKEF 228 (246)
T ss_pred E-ECCHHHH
Confidence 4 4665554
No 285
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-37 Score=318.48 Aligned_cols=221 Identities=24% Similarity=0.339 Sum_probs=163.5
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
.|+++||++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..+.| ..|+|.+.+.++......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~---- 78 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID---- 78 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc----
Confidence 5899999999998899999999999999999999999999999999999765333 478888777654321000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... . ...+.+++..... .... .......++.++++.+++.. ...+++
T Consensus 79 -------~~~~~~~i~~~~q~~~~------~-~~t~~~ni~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 143 (250)
T PRK14240 79 -------VNQLRKRVGMVFQQPNP------F-PMSIYDNVAYGPR-THGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKS 143 (250)
T ss_pred -------hHHHhccEEEEecCCcc------C-cccHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcC
Confidence 00112223333221110 0 1122232221111 1111 12234567888899988742 234688
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 144 ~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i 223 (250)
T PRK14240 144 ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEI 223 (250)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876 47999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+.+++
T Consensus 224 ~~-~~~~~~~ 232 (250)
T PRK14240 224 VE-FGDTVDL 232 (250)
T ss_pred EE-eCCHHHH
Confidence 75 4665544
No 286
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=329.78 Aligned_cols=234 Identities=20% Similarity=0.202 Sum_probs=166.2
Q ss_pred cceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCCh--
Q 048654 164 KDITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDR-- 236 (723)
Q Consensus 164 ~~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~-- 236 (723)
.+|+++|+++.|++ +++|+||||+|++|+++||+|+||||||||+++|+|++.|. .|+|.+.+..+.....
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~--~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK--YGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC--CCeEEECCEEcccccccc
Confidence 46999999999974 36999999999999999999999999999999999987654 5566665554321100
Q ss_pred HHHHHHHHh-hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccC
Q 048654 237 SAIQAVVSA-HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQG 315 (723)
Q Consensus 237 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~ 315 (723)
......... ......++..++++.+.... ......+.+++...... ..........++.++++.+|+.....+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~-----~l~~~tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~gL~~~~~~ 171 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEY-----QLFKDTIEKDIMFGPVA-LGVKKSEAKKLAKFYLNKMGLDDSYLE 171 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchh-----ccccchHHHHHHhhHHh-cCCCHHHHHHHHHHHHHHcCCChhHhc
Confidence 000000000 00111233344444332100 00011223333211111 112233455678899999999644457
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
+.+.+|||||||||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++
T Consensus 172 ~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~ 251 (320)
T PRK13631 172 RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDK 251 (320)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 899999999999999999999999999999999999999999999998754 67999999999999999999999999
Q ss_pred CEEEEecCChhhHH
Q 048654 393 QKLHFYRGNFDDFE 406 (723)
Q Consensus 393 G~i~~~~g~~~~~~ 406 (723)
|+++. .|+.+++.
T Consensus 252 G~i~~-~g~~~~~~ 264 (320)
T PRK13631 252 GKILK-TGTPYEIF 264 (320)
T ss_pred CEEEE-eCCHHHHh
Confidence 99974 57776654
No 287
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=323.05 Aligned_cols=210 Identities=28% Similarity=0.354 Sum_probs=165.1
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~------- 559 (723)
..++|+++||++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|++++.
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999975 3589999999999999999999999999999999999975 8999987652
Q ss_pred ------eeEEEEccccccc-cCccccHHHHHHhhCCCC-CCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQ-EGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARV 628 (723)
Q Consensus 560 ------~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv 628 (723)
..++|++|..... .++.++.. +........ ........+..+++.+|+... ...+++.+|||||||||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 172 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVA-YGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRL 172 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHH-HHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 2478999874211 12222221 111111000 000123457788999999531 22456789999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
+|||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| ++++|++|+|+. .|++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d-----~v~~l~~G~i~~-~g~~ 246 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQ-----RTAFFHLGNLVE-VGDT 246 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCC-----EEEEEECCEEEE-eCCH
Confidence 99999999999999999999999999999999998874 589999999999999995 999999999975 4777
Q ss_pred HHHH
Q 048654 707 EEYK 710 (723)
Q Consensus 707 ~~~~ 710 (723)
+++.
T Consensus 247 ~~~~ 250 (267)
T PRK14235 247 EKMF 250 (267)
T ss_pred HHHH
Confidence 7664
No 288
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.2e-37 Score=359.50 Aligned_cols=209 Identities=29% Similarity=0.510 Sum_probs=169.8
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccc-
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDL- 572 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~- 572 (723)
.+|+++||+++|++. .+|+||||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+...+++++|.....
T Consensus 2 ~~l~i~~ls~~~~~~--~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~~~ 79 (635)
T PRK11147 2 SLISIHGAWLSFSDA--PLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPRNV 79 (635)
T ss_pred cEEEEeeEEEEeCCc--eeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCCCC
Confidence 379999999999853 58999999999999999999999999999999999999999999988766678887743110
Q ss_pred -cCccccHH-------HH------H------------Hh-------hCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCC
Q 048654 573 -LTMEETPV-------SY------L------------LR-------LHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAK 619 (723)
Q Consensus 573 -~~~~~~~~-------~~------~------------~~-------~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~ 619 (723)
..+.+... .. + +. .+....+......+..+|..|||.. .+++.+
T Consensus 80 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~~---~~~~~~ 156 (635)
T PRK11147 80 EGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLDP---DAALSS 156 (635)
T ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCCC---CCchhh
Confidence 11111100 00 0 00 0000001112356788999999962 468899
Q ss_pred CCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 620 LSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 620 LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
|||||||||+|||+|+.+|+||||||||||||+.++..|.+.|.++.+|||+||||++++..+|| +|++|++|++
T Consensus 157 LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d-----~i~~L~~G~i 231 (635)
T PRK11147 157 LSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMAT-----RIVDLDRGKL 231 (635)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcC-----eEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999995 9999999999
Q ss_pred EecCCCHHHHHHH
Q 048654 700 SRFPGTFEEYKED 712 (723)
Q Consensus 700 ~~~~g~~~~~~~~ 712 (723)
+.+.|++..|...
T Consensus 232 ~~~~g~~~~~~~~ 244 (635)
T PRK11147 232 VSYPGNYDQYLLE 244 (635)
T ss_pred EEecCCHHHHHHH
Confidence 8888999887553
No 289
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-37 Score=319.97 Aligned_cols=222 Identities=22% Similarity=0.276 Sum_probs=165.4
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~ 240 (723)
.+|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..|.| ..|+|.+.+.++.......
T Consensus 11 ~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~-- 88 (259)
T PRK14274 11 EVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL-- 88 (259)
T ss_pred ceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH--
Confidence 36999999999998899999999999999999999999999999999999865322 4688887776553211000
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQGR 316 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~ 316 (723)
..++..++++.+.... . ...+.+++.... ..... .......++.++++.+|+.+ ...++
T Consensus 89 ---------~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~ 151 (259)
T PRK14274 89 ---------VELRKNIGMVFQKGNP------F-PQSIFDNVAYGP-RIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHT 151 (259)
T ss_pred ---------HHHhhceEEEecCCcc------c-ccCHHHHHHhHH-HhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhC
Confidence 0112233333221111 0 012223222111 11111 12334566788999999852 23468
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|.++ +.|||+|||+++++..+||+|++|++|+
T Consensus 152 ~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~ 231 (259)
T PRK14274 152 QALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGE 231 (259)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999876 4799999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++. .|+.+++
T Consensus 232 i~~-~g~~~~~ 241 (259)
T PRK14274 232 LVE-CNDTNKM 241 (259)
T ss_pred EEE-ECCHHHH
Confidence 974 4776665
No 290
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-37 Score=321.99 Aligned_cols=208 Identities=25% Similarity=0.331 Sum_probs=164.1
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~-------- 559 (723)
..+|+++|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+++.
T Consensus 11 ~~~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGKF--HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCCe--EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 5689999999999753 58999999999999999999999999999999999986 58999987652
Q ss_pred -----eeEEEEccccccccCccccHHHHHH---hhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDLLTMEETPVSYLL---RLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 560 -----~~ig~~~q~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv 628 (723)
..++|++|... .+. .+....+. ..+.........+.+.++++.+++.. ....+++.+|||||+|||
T Consensus 89 ~~~~~~~i~~~~q~~~-~~~--~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv 165 (260)
T PRK10744 89 IALLRAKVGMVFQKPT-PFP--MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRL 165 (260)
T ss_pred hHHHhcceEEEecCCc-cCc--CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHH
Confidence 24889998742 111 22222221 11111000011245778899999742 122456789999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
+|||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| ++++|++|+++. .|+.
T Consensus 166 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~ 239 (260)
T PRK10744 166 CIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSD-----YTAFMYLGELIE-FGNT 239 (260)
T ss_pred HHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCH
Confidence 99999999999999999999999999999999998874 589999999999999995 999999999975 4777
Q ss_pred HHHHH
Q 048654 707 EEYKE 711 (723)
Q Consensus 707 ~~~~~ 711 (723)
+++..
T Consensus 240 ~~~~~ 244 (260)
T PRK10744 240 DTIFT 244 (260)
T ss_pred HHHHh
Confidence 76643
No 291
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-37 Score=318.50 Aligned_cols=221 Identities=22% Similarity=0.269 Sum_probs=163.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++|++++|+++++|+|+||+|.+|++++|+||||||||||+++|+|++...| ..|+|.+.++++......
T Consensus 5 ~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~---- 80 (252)
T PRK14239 5 ILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTD---- 80 (252)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccc----
Confidence 6899999999998899999999999999999999999999999999999854333 367888777655321100
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... . ...+.+++..... ..... ......++.++++.+|+.. ...+++
T Consensus 81 -------~~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 145 (252)
T PRK14239 81 -------TVDLRKEIGMVFQQPNP------F-PMSIYENVVYGLR-LKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDS 145 (252)
T ss_pred -------hHhhhhcEEEEecCCcc------C-cCcHHHHHHHHHH-HcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcC
Confidence 00112223333221110 0 1122233321111 11111 1223466788899998742 234688
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 146 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i 225 (252)
T PRK14239 146 ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDL 225 (252)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999875 47999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+..++
T Consensus 226 ~~-~g~~~~~ 234 (252)
T PRK14239 226 IE-YNDTKQM 234 (252)
T ss_pred EE-eCCHHHH
Confidence 74 4666554
No 292
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=321.13 Aligned_cols=226 Identities=23% Similarity=0.318 Sum_probs=167.1
Q ss_pred cCCccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCCh
Q 048654 160 DANVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDR 236 (723)
Q Consensus 160 ~~~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~ 236 (723)
++..++|+++||+++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..|. |..|+|.+.+..+.....
T Consensus 16 ~~~~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~ 95 (276)
T PRK14271 16 DAAAPAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRD 95 (276)
T ss_pred cccCcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccch
Confidence 44566899999999999999999999999999999999999999999999999987653 457788776654431110
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cc
Q 048654 237 SAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EM 313 (723)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~ 313 (723)
...++..++++.+.... . ...+.+++.................++.++++.+|+.. ..
T Consensus 96 ------------~~~~~~~i~~v~q~~~l------~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 156 (276)
T PRK14271 96 ------------VLEFRRRVGMLFQRPNP------F-PMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDR 156 (276)
T ss_pred ------------hHHHhhheEEeccCCcc------C-CccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhH
Confidence 00112223333221110 0 11222222211111001122233456678899999853 22
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEe
Q 048654 314 QGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLH 391 (723)
Q Consensus 314 ~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~ 391 (723)
.++.+.+|||||+|||+|||||+.+|+||||||||++||+.++.+|.++|+++ ..|||+|||+++++..+||+|++|+
T Consensus 157 l~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~ 236 (276)
T PRK14271 157 LSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFF 236 (276)
T ss_pred hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46788999999999999999999999999999999999999999999999876 4799999999999999999999999
Q ss_pred CCEEEEecCChhhH
Q 048654 392 DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 ~G~i~~~~g~~~~~ 405 (723)
+|+++. .|+.+++
T Consensus 237 ~G~i~~-~g~~~~~ 249 (276)
T PRK14271 237 DGRLVE-EGPTEQL 249 (276)
T ss_pred CCEEEE-eCCHHHH
Confidence 999974 4676655
No 293
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.5e-37 Score=312.32 Aligned_cols=203 Identities=26% Similarity=0.376 Sum_probs=155.3
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| .+|+|.+.+..+... .
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~--~-------- 68 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP--DSGEITFDGKSYQKN--I-------- 68 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCCcccch--H--------
Confidence 5789999999989999999999999999999999999999999999998654 466777665543210 0
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
..+..++++.+.... .....+.+++..... . ... ...++.++++.+|+.. ..++++.+|||||
T Consensus 69 -----~~~~~i~~~~q~~~~------~~~~tv~e~l~~~~~-~--~~~--~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 131 (208)
T cd03268 69 -----EALRRIGALIEAPGF------YPNLTARENLRLLAR-L--LGI--RKKRIDEVLDVVGLKD-SAKKKVKGFSLGM 131 (208)
T ss_pred -----HHHhhEEEecCCCcc------CccCcHHHHHHHHHH-h--cCC--cHHHHHHHHHHcCCHH-HHhhhHhhCCHHH
Confidence 111222333221100 111122333222111 1 111 2456788999999964 4578899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++.
T Consensus 132 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~ 206 (208)
T cd03268 132 KQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIE 206 (208)
T ss_pred HHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999998764 5799999999999999999999999999863
No 294
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=324.66 Aligned_cols=223 Identities=23% Similarity=0.292 Sum_probs=162.8
Q ss_pred ceEEEeEEEEeCC-----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 165 DITIDNFSVAARG-----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~-----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
.|+++||+++|++ +++|+|+||+|++|++++|+|||||||||||++|+|+..| .+|+|.+.+.++.......
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~- 78 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLITSTSKNK- 78 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccccccc-
Confidence 4889999999975 4699999999999999999999999999999999998654 5677777666543211000
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
....++..++++.+..... .. ...+.+++..... ...........++.++++.+|+.....++++.
T Consensus 79 --------~~~~~~~~i~~~~q~~~~~----~~-~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (280)
T PRK13649 79 --------DIKQIRKKVGLVFQFPESQ----LF-EETVLKDVAFGPQ-NFGVSQEEAEALAREKLALVGISESLFEKNPF 144 (280)
T ss_pred --------CHHHHHhheEEEeeChhhh----hc-cccHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCCChhhhhCCcc
Confidence 0001122233332211000 00 0122222221111 11122234456788899999996444578999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++
T Consensus 145 ~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 224 (280)
T PRK13649 145 ELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLV 224 (280)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765 579999999999999999999999999997
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+.+++
T Consensus 225 ~-~g~~~~~ 232 (280)
T PRK13649 225 L-SGKPKDI 232 (280)
T ss_pred E-eCCHHHH
Confidence 4 4666554
No 295
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=9.1e-37 Score=318.52 Aligned_cols=225 Identities=20% Similarity=0.309 Sum_probs=163.3
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCC---hH--HHH
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDD---RS--AIQ 240 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~---~~--~~~ 240 (723)
|+++||++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.++.+.... .. ...
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccccccc
Confidence 5789999999988999999999999999999999999999999999998654 5567777666543211 00 000
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
......++..++++.+.... .....+.+++.................++.++++.+|+.. ..++.+.+
T Consensus 79 -----~~~~~~~~~~i~~v~q~~~~------~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~ 146 (252)
T TIGR03005 79 -----EKHLRQMRNKIGMVFQSFNL------FPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLAD-KADHMPAQ 146 (252)
T ss_pred -----hhHHHHHhhCeEEEecCccc------CCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-HhhcChhh
Confidence 00001122223333221110 0111223333211111111222334567889999999974 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||+|||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999988754 679999999999999999999999999996
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
+.|+.+++
T Consensus 227 -~~g~~~~~ 234 (252)
T TIGR03005 227 -EQGKPDEI 234 (252)
T ss_pred -EeCCHHHH
Confidence 45776655
No 296
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.9e-37 Score=315.42 Aligned_cols=198 Identities=27% Similarity=0.402 Sum_probs=162.3
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------eeEEEEccc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------LRIGRYSQH 568 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------~~ig~~~q~ 568 (723)
|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|.
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~ 78 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIES 78 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCC
Confidence 468999999975 35899999999999999999999999999999999999999999988763 257899886
Q ss_pred cc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccC
Q 048654 569 FV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEP 646 (723)
Q Consensus 569 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEP 646 (723)
.. ..+++.++.... ...+. . ....+.++++.+|+.... ++++.+|||||+|||+||||++.+|++||||||
T Consensus 79 ~~~~~~~t~~~~~~~~-~~~~~----~-~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~~rv~laral~~~p~llllDEP 151 (223)
T TIGR03740 79 PPLYENLTARENLKVH-TTLLG----L-PDSRIDEVLNIVDLTNTG-KKKAKQFSLGMKQRLGIAIALLNHPKLLILDEP 151 (223)
T ss_pred CCccccCCHHHHHHHH-HHHcC----C-CHHHHHHHHHHcCCcHHH-hhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 42 122333332111 11111 1 235678899999997544 466789999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 647 TNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 647 T~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
|+|||+.++..+.++|.++. .|||+||||.+++..+|| +|++|++|+++. .|++.+
T Consensus 152 ~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~g~i~~-~~~~~~ 210 (223)
T TIGR03740 152 TNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLAD-----HIGIISEGVLGY-QGKINK 210 (223)
T ss_pred ccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcC-----EEEEEeCCEEEE-ecChhh
Confidence 99999999999999998873 589999999999999995 999999999975 466543
No 297
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.3e-37 Score=323.70 Aligned_cols=223 Identities=21% Similarity=0.281 Sum_probs=161.4
Q ss_pred cceEEEeEEEEeCC---------eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCC
Q 048654 164 KDITIDNFSVAARG---------KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGD 234 (723)
Q Consensus 164 ~~I~l~nls~~y~~---------~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~ 234 (723)
.+|+++||+++|++ +++|+|+||+|++|++++|+|||||||||||++|+|++.|. +|+|.+.+.++...
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~--~G~i~~~g~~~~~~ 80 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT--SGELLIDDHPLHFG 80 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC--CCEEEECCEECCCC
Confidence 35999999999962 57999999999999999999999999999999999987654 55666666554321
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcccc
Q 048654 235 DRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQ 314 (723)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~ 314 (723)
.... .+..++++.+.... .......+.+.+.........+.......++.++++.+|+.....
T Consensus 81 ~~~~-------------~~~~i~~v~q~~~~----~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 143 (267)
T PRK15112 81 DYSY-------------RSQRIRMIFQDPST----SLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA 143 (267)
T ss_pred chhh-------------HhccEEEEecCchh----hcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH
Confidence 1100 01112222211000 000011111222111110001122334567889999999954445
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEE
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHL 390 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L 390 (723)
++++.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|.++ +.|||+|||+++++..+||+|++|
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 144 SYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred hcCchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 7888999999999999999999999999999999999999999999998764 679999999999999999999999
Q ss_pred eCCEEEEecCChhhHH
Q 048654 391 HDQKLHFYRGNFDDFE 406 (723)
Q Consensus 391 ~~G~i~~~~g~~~~~~ 406 (723)
++|+++ +.|+++++.
T Consensus 224 ~~G~i~-~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVV-ERGSTADVL 238 (267)
T ss_pred ECCEEE-ecCCHHHHh
Confidence 999996 457766553
No 298
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-37 Score=315.01 Aligned_cols=213 Identities=27% Similarity=0.362 Sum_probs=158.1
Q ss_pred cceEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 164 KDITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 164 ~~I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
++|+++||++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+.. |..|+|.+.+.++........
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~ 81 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMSKLSSAAK 81 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCCHHHH
Confidence 36999999999974 579999999999999999999999999999999999865 456777777765543221110
Q ss_pred HHHHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 240 QAVVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 240 ~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
..++ ..++++.+.... .....+.+++.... .+..........++.++++.+|+.+ ..++.+
T Consensus 82 ----------~~~~~~~i~~v~q~~~~------~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~ 143 (233)
T PRK11629 82 ----------AELRNQKLGFIYQFHHL------LPDFTALENVAMPL-LIGKKKPAEINSRALEMLAAVGLEH-RANHRP 143 (233)
T ss_pred ----------HHHHhccEEEEecCccc------CCCCCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCch-hhhCCh
Confidence 0011 122333221110 00112233322211 1111223344567899999999974 457889
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+ |++++|++|+
T Consensus 144 ~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~ 222 (233)
T PRK11629 144 SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGR 222 (233)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCE
Confidence 999999999999999999999999999999999999999999998764 57999999999999875 6999999999
Q ss_pred EEE
Q 048654 395 LHF 397 (723)
Q Consensus 395 i~~ 397 (723)
++.
T Consensus 223 i~~ 225 (233)
T PRK11629 223 LTA 225 (233)
T ss_pred EEE
Confidence 863
No 299
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.1e-37 Score=320.73 Aligned_cols=225 Identities=24% Similarity=0.332 Sum_probs=166.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC-CcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP-KNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~-~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++||++.|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..|.+ ..|+|.+.+..+.......
T Consensus 4 ~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~----- 78 (262)
T PRK09984 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLA----- 78 (262)
T ss_pred EEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccc-----
Confidence 5899999999999999999999999999999999999999999999999876653 3578877776543211000
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH---H----HhcCchHHHHHHHHHHHhCCCCccccCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK---L----QILGSDAAEAQASKILAGLGFTKEMQGR 316 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l----~~~~~~~~~~~~~~~L~~lgl~~~~~~~ 316 (723)
.....++..++++.+.... .....+.+++...... + ..........++.++++.+|+.. ..++
T Consensus 79 ---~~~~~~~~~i~~~~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~ 148 (262)
T PRK09984 79 ---RDIRKSRANTGYIFQQFNL------VNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVH-FAHQ 148 (262)
T ss_pred ---hhHHHHHhheEEEcccccc------ccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHH-HHhC
Confidence 0001112223333221110 0011222222111000 0 00011234567899999999964 4578
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
++.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++
T Consensus 149 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~ 228 (262)
T PRK09984 149 RVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQ 228 (262)
T ss_pred CccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999864 57999999999999999999999999
Q ss_pred CEEEEecCChhhH
Q 048654 393 QKLHFYRGNFDDF 405 (723)
Q Consensus 393 G~i~~~~g~~~~~ 405 (723)
|+++ +.|+++++
T Consensus 229 g~i~-~~g~~~~~ 240 (262)
T PRK09984 229 GHVF-YDGSSQQF 240 (262)
T ss_pred CEEE-EeCCHHHh
Confidence 9995 56887665
No 300
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-37 Score=320.23 Aligned_cols=205 Identities=25% Similarity=0.310 Sum_probs=156.3
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|+++.|+++++|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+.++.....
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~-------- 70 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVEGPGA-------- 70 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCC--------
Confidence 47899999999988999999999999999999999999999999999998755 45667666655432110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
.++++.+.... .....+.+++.... ............++.++++.+|+.. ..++++.+||||
T Consensus 71 ----------~~~~v~q~~~~------~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG 132 (255)
T PRK11248 71 ----------ERGVVFQNEGL------LPWRNVQDNVAFGL-QLAGVEKMQRLEIAHQMLKKVGLEG-AEKRYIWQLSGG 132 (255)
T ss_pred ----------cEEEEeCCCcc------CCCCcHHHHHHhHH-HHcCCCHHHHHHHHHHHHHHcCChh-HhhCChhhCCHH
Confidence 01111111000 00112222222111 1111222334567899999999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEe--CCEEEE
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLH--DQKLHF 397 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~--~G~i~~ 397 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|+ +|+++.
T Consensus 133 q~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~ 211 (255)
T PRK11248 133 QRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVE 211 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEE
Confidence 999999999999999999999999999999999999999764 5799999999999999999999998 599864
No 301
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-37 Score=310.75 Aligned_cols=194 Identities=27% Similarity=0.380 Sum_probs=155.6
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
|+++|+++.|++. . .|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~ 76 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLF 76 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEe
Confidence 4689999999753 2 3999999999999999999999999999999999999999998763 2489999
Q ss_pred cccccccCccccHHHHHHhh-CCCCC-CCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFVDLLTMEETPVSYLLRL-HPDQE-GLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|...- ....+..+.+... ..... .......+.++++.+|+.... ++++.+|||||||||+|||||+.+|++||||
T Consensus 77 q~~~~--~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~ia~al~~~p~llllD 153 (211)
T cd03298 77 QENNL--FAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLE-KRLPGELSGGERQRVALARVLVRDKPVLLLD 153 (211)
T ss_pred ccccc--CCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHH-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 97431 1111222222111 11100 001244678899999997544 4567899999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 645 EPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||+|||+.++..+.++|+++ +.|||+||||++++..+|| ++++|++|+++.
T Consensus 154 EP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~G~i~~ 209 (211)
T cd03298 154 EPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQ-----RVVFLDNGRIAA 209 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhC-----EEEEEECCEEee
Confidence 999999999999999999875 3589999999999999995 999999999864
No 302
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-37 Score=321.72 Aligned_cols=209 Identities=28% Similarity=0.411 Sum_probs=166.4
Q ss_pred eEEEEEEEEEcCCC--cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-C----CcceEEECCc--------
Q 048654 495 LLQLIEVSFSYPNR--EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-P----TEGEVRRSQK-------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~--~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-p----~~G~I~~~~~-------- 559 (723)
+|+++||++.|... ...+++||||+|.+||++||||.+||||||+.+.|+|+++ | .+|+|.++++
T Consensus 1 lL~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~ 80 (316)
T COG0444 1 LLEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEK 80 (316)
T ss_pred CceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHH
Confidence 47899999999643 2358999999999999999999999999999999999998 4 5689987764
Q ss_pred -------eeEEEEccccccccC----ccccHHHHHHhhCCCC-CCCcHHHHHHHHHHhCCCCCC--CCcCCCCCCCHHHH
Q 048654 560 -------LRIGRYSQHFVDLLT----MEETPVSYLLRLHPDQ-EGLSKQEAVRAKLGKFGLPSH--NHLTPIAKLSGGQK 625 (723)
Q Consensus 560 -------~~ig~~~q~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~gl~~~--~~~~~i~~LSGGqk 625 (723)
..|++++|+....+. +..-..+.+ ..+... ......+.+.++|+.+||+.. ..+..+.+|||||+
T Consensus 81 ~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l-~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMr 159 (316)
T COG0444 81 ELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVL-RLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMR 159 (316)
T ss_pred HHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHH-HHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHH
Confidence 258999998644433 222222222 221111 011124568899999999864 23345689999999
Q ss_pred HHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 626 ARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 626 qRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||+||.||+.+|+|||.||||++||+..+.+++++|+++ +.++|+||||+..+.++|| ||+||..|+|++
T Consensus 160 QRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aD-----ri~VMYaG~iVE 234 (316)
T COG0444 160 QRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIAD-----RVAVMYAGRIVE 234 (316)
T ss_pred HHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcc-----eEEEEECcEEEE
Confidence 9999999999999999999999999999999999999876 3589999999999999995 999999999997
Q ss_pred cCCCHHHHH
Q 048654 702 FPGTFEEYK 710 (723)
Q Consensus 702 ~~g~~~~~~ 710 (723)
. |+.+++.
T Consensus 235 ~-g~~~~i~ 242 (316)
T COG0444 235 E-GPVEEIF 242 (316)
T ss_pred e-CCHHHHh
Confidence 5 7766543
No 303
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.3e-36 Score=314.31 Aligned_cols=216 Identities=24% Similarity=0.349 Sum_probs=160.9
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|.|.+.+.++......
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~~~~~~------- 71 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLRRAPRA------- 71 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcccCChh-------
Confidence 47899999999999999999999999999999999999999999999998654 556777666544321111
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
....++++.+.... .....+.+++... .............++.++++.+|+.. ..++++.+||||
T Consensus 72 -------~~~~i~~~~q~~~~------~~~~t~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G 136 (236)
T TIGR03864 72 -------ALARLGVVFQQPTL------DLDLSVRQNLRYH-AALHGLSRAEARERIAALLARLGLAE-RADDKVRELNGG 136 (236)
T ss_pred -------hhhhEEEeCCCCCC------cccCcHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHcCChh-hhcCChhhCCHH
Confidence 01122222221110 0011222222211 11111222334567889999999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++.. ||+|++|++|+++. .|
T Consensus 137 ~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~-~~ 214 (236)
T TIGR03864 137 HRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLA-DG 214 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEE-eC
Confidence 999999999999999999999999999999999999998764 5799999999999975 99999999999964 46
Q ss_pred ChhhHH
Q 048654 401 NFDDFE 406 (723)
Q Consensus 401 ~~~~~~ 406 (723)
+.+.+.
T Consensus 215 ~~~~~~ 220 (236)
T TIGR03864 215 AAAELR 220 (236)
T ss_pred CHHHHH
Confidence 665543
No 304
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.4e-37 Score=317.14 Aligned_cols=219 Identities=23% Similarity=0.353 Sum_probs=162.5
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|+++.|+++++|+|+||+|.+|++++|+|+|||||||||++|+|+..| ..|+|.+.+..+........
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~----- 74 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLTGLPEHQI----- 74 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecCCCCHHHH-----
Confidence 48999999999988999999999999999999999999999999999998755 45666666654432211100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH-------HHhcCchHHHHHHHHHHHhCCCCccccCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK-------LQILGSDAAEAQASKILAGLGFTKEMQGRP 317 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 317 (723)
.+..++++.+.... .....+.+++...... +..........++.++++.+|+.. ..+++
T Consensus 75 -------~~~~i~~~~q~~~~------~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~ 140 (242)
T TIGR03411 75 -------ARAGIGRKFQKPTV------FENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLAD-EADRL 140 (242)
T ss_pred -------HhcCeeEecccccc------CCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCch-hhcCC
Confidence 01112222111100 0011222222211100 000011234567899999999974 45789
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++.++||+|++|++|++
T Consensus 141 ~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~ 220 (242)
T TIGR03411 141 AGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSV 220 (242)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999999876 46999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+ +.|+.+++
T Consensus 221 ~-~~~~~~~~ 229 (242)
T TIGR03411 221 L-AEGSLDQV 229 (242)
T ss_pred E-eeCCHHHH
Confidence 7 45776655
No 305
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.3e-37 Score=336.39 Aligned_cols=200 Identities=27% Similarity=0.337 Sum_probs=161.1
Q ss_pred EEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------------e
Q 048654 500 EVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------------------L 560 (723)
Q Consensus 500 ~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------------------~ 560 (723)
++.+.|+. ..+|+|+||+|.+||+++|+|+||||||||+++|+|+++|++|+|+++++ .
T Consensus 29 ~~~~~~g~--~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~ 106 (382)
T TIGR03415 29 EILDETGL--VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTH 106 (382)
T ss_pred HHHHhhCC--EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcC
Confidence 34556654 35799999999999999999999999999999999999999999998762 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
.++|++|++. ...++.++.... ..... .........+.++++.+||.... ++++.+|||||||||+|||||+.+|
T Consensus 107 ~i~~vfQ~~~l~p~~Tv~eNi~~~-~~~~g-~~~~~~~~~a~e~le~vgL~~~~-~~~~~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 107 RVSMVFQKFALMPWLTVEENVAFG-LEMQG-MPEAERRKRVDEQLELVGLAQWA-DKKPGELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred CEEEEECCCcCCCCCcHHHHHHHH-HHhcC-CCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 4899999753 233444443211 11111 10011235678899999997654 4667899999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+||||||||++||+.++..+.+.|.++ +.|||+||||++++.++|| +|++|++|+++. .|+++++.
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~D-----rI~vl~~G~iv~-~g~~~ei~ 253 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGN-----RIAIMEGGRIIQ-HGTPEEIV 253 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-ecCHHHHh
Confidence 999999999999999999999998775 4699999999999999995 999999999975 58887764
No 306
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=321.95 Aligned_cols=220 Identities=22% Similarity=0.303 Sum_probs=164.6
Q ss_pred cceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 164 KDITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 164 ~~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
.+|+++|++++|+ ++.+|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 2 ~~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~---- 75 (277)
T PRK13652 2 HLIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKP--TSGSVLIRGEPITKENIRE---- 75 (277)
T ss_pred ceEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECCcCCHHH----
Confidence 3589999999996 56799999999999999999999999999999999998654 5667777666553221111
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
+...++++.+.... ......+.+++.... ....+.......++.++++.+|+.. ..++.+.+||
T Consensus 76 ---------~~~~i~~v~q~~~~-----~~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS 139 (277)
T PRK13652 76 ---------VRKFVGLVFQNPDD-----QIFSPTVEQDIAFGP-INLGLDEETVAHRVSSALHMLGLEE-LRDRVPHHLS 139 (277)
T ss_pred ---------HHhheEEEecCccc-----ccccccHHHHHHhHH-HHcCCCHHHHHHHHHHHHHHCCChh-HhcCCcccCC
Confidence 11222332221100 000112223322111 1111233344567889999999974 4578999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
||||||++|||||+.+|+||||||||++||+.++..+.++|+++ +.|||++||+++++..+||+|++|++|+++ +
T Consensus 140 ~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~-~ 218 (277)
T PRK13652 140 GGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIV-A 218 (277)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-E
Confidence 99999999999999999999999999999999999999988754 579999999999999999999999999997 4
Q ss_pred cCChhhHH
Q 048654 399 RGNFDDFE 406 (723)
Q Consensus 399 ~g~~~~~~ 406 (723)
.|+.+++.
T Consensus 219 ~g~~~~~~ 226 (277)
T PRK13652 219 YGTVEEIF 226 (277)
T ss_pred ECCHHHHh
Confidence 57776664
No 307
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-37 Score=318.44 Aligned_cols=209 Identities=27% Similarity=0.341 Sum_probs=163.2
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCC--CC---CcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDL--SP---TEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~--~p---~~G~I~~~~~-------- 559 (723)
.++|+++||++.|+++ .+|+++||+|.+|++++|+||||||||||+++|+|+. +| ++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~~--~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~ 80 (252)
T PRK14239 3 EPILQVSDLSVYYNKK--KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTD 80 (252)
T ss_pred CceEEEEeeEEEECCe--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccc
Confidence 4589999999999753 5899999999999999999999999999999999985 46 5899987652
Q ss_pred -----eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|.... ..++.++.... ...............+..+++.+++.. ....+++.+|||||||||+|
T Consensus 81 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 159 (252)
T PRK14239 81 TVDLRKEIGMVFQQPNPFPMSIYENVVYG-LRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCI 159 (252)
T ss_pred hHhhhhcEEEEecCCccCcCcHHHHHHHH-HHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHH
Confidence 248899987421 12333332111 111111000012345677888888742 12345678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|+.++
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~ 233 (252)
T PRK14239 160 ARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISD-----RTGFFLDGDLIE-YNDTKQ 233 (252)
T ss_pred HHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCC-----EEEEEECCEEEE-eCCHHH
Confidence 999999999999999999999999999999998874 689999999999999995 999999999975 577776
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 234 ~~ 235 (252)
T PRK14239 234 MF 235 (252)
T ss_pred HH
Confidence 64
No 308
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-37 Score=319.46 Aligned_cols=205 Identities=24% Similarity=0.324 Sum_probs=156.3
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
.+.|+++||+++|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.
T Consensus 10 ~~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~~---------- 77 (257)
T PRK11247 10 GTPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPLA---------- 77 (257)
T ss_pred CCcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEHH----------
Confidence 3569999999999999999999999999999999999999999999999998755 4566655433211
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
.++..++++.+.... .....+.+++... .. .....++.++++.+|+.. ..++++.+||
T Consensus 78 --------~~~~~i~~v~q~~~l------~~~~tv~enl~~~------~~-~~~~~~~~~~l~~~gl~~-~~~~~~~~LS 135 (257)
T PRK11247 78 --------EAREDTRLMFQDARL------LPWKKVIDNVGLG------LK-GQWRDAALQALAAVGLAD-RANEWPAALS 135 (257)
T ss_pred --------HhhCceEEEecCccC------CCCCcHHHHHHhc------cc-chHHHHHHHHHHHcCChh-HhcCChhhCC
Confidence 011122222221100 0011222222111 00 112457888999999974 4578999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||+|||||+.+|+||||||||++||+.++..|.++|.++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~- 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL- 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-
Confidence 99999999999999999999999999999999999999988754 5799999999999999999999999999964
Q ss_pred cCCh
Q 048654 399 RGNF 402 (723)
Q Consensus 399 ~g~~ 402 (723)
.++.
T Consensus 215 ~~~~ 218 (257)
T PRK11247 215 DLTV 218 (257)
T ss_pred eccc
Confidence 3443
No 309
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.1e-38 Score=310.30 Aligned_cols=214 Identities=21% Similarity=0.347 Sum_probs=173.3
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.+++++|+++||++.+++|+||++++|+++|++|+|||||||.+|+|.|+..| .+|.|.+.++++.... .+.++
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~~~~----~~rIG 75 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLSQEI----KNRIG 75 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchhhhh----hhhcc
Confidence 58999999999999999999999999999999999999999999999998765 5567777777654211 11122
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
+.|+-..|.+. ..+.+.+. ++..+..+...+...++..+|+++++... ..+++.+||-|
T Consensus 76 yLPEERGLy~k-------------------~tv~dql~-yla~LkGm~~~e~~~~~~~wLer~~i~~~-~~~kIk~LSKG 134 (300)
T COG4152 76 YLPEERGLYPK-------------------MTVEDQLK-YLAELKGMPKAEIQKKLQAWLERLEIVGK-KTKKIKELSKG 134 (300)
T ss_pred cChhhhccCcc-------------------CcHHHHHH-HHHHhcCCcHHHHHHHHHHHHHhcccccc-ccchHHHhhhh
Confidence 22222222211 12233332 34456667778888999999999999754 47999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh---cCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR---WKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~---~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
++|+|.+..+++++|++||||||||||||.+++.|.+.+.+ .|.|||++||.++.+..+||++++|+.|+.+.+ |+
T Consensus 135 nqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~-G~ 213 (300)
T COG4152 135 NQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLY-GT 213 (300)
T ss_pred hhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEe-cc
Confidence 99999999999999999999999999999999999888765 478999999999999999999999999999765 88
Q ss_pred hhhHH
Q 048654 402 FDDFE 406 (723)
Q Consensus 402 ~~~~~ 406 (723)
.....
T Consensus 214 v~~ir 218 (300)
T COG4152 214 VEDIR 218 (300)
T ss_pred HHHHH
Confidence 76653
No 310
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-37 Score=322.63 Aligned_cols=208 Identities=24% Similarity=0.315 Sum_probs=163.1
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc--------eeEEEE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------LRIGRY 565 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------~~ig~~ 565 (723)
.+|+++||++.|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 5 ~~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v 83 (272)
T PRK15056 5 AGIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYV 83 (272)
T ss_pred ceEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEe
Confidence 368999999999632 35899999999999999999999999999999999999999999998763 248999
Q ss_pred ccccccc----cCccccHHHHHHhhCC--CCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 566 SQHFVDL----LTMEETPVSYLLRLHP--DQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 566 ~q~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
+|+.... ..+.++.......... ..........+..+++.+||.... ++++.+|||||||||+|||||+.+|+
T Consensus 84 ~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qrv~laraL~~~p~ 162 (272)
T PRK15056 84 PQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-HRQIGELSGGQKKRVFLARAIAQQGQ 162 (272)
T ss_pred ccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-cCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 9874211 1122211100000000 000011234567889999997544 46789999999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +++++ +|+++. .|+++++.
T Consensus 163 llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d-----~v~~~-~G~i~~-~g~~~~~~ 229 (272)
T PRK15056 163 VILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCD-----YTVMV-KGTVLA-SGPTETTF 229 (272)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCC-----EEEEE-CCEEEe-ecCHHhcc
Confidence 99999999999999999999999877 3589999999999999995 88777 899974 57777653
No 311
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=323.02 Aligned_cols=218 Identities=27% Similarity=0.336 Sum_probs=161.7
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++|+++++|+|+||+|++|++++|+|+|||||||||++|+|+..| ..|+|.+.+..+......
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~------- 72 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTP--QSGTVFLGDKPISMLSSR------- 72 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCcEEEECCEEhHHCCHH-------
Confidence 58999999999999999999999999999999999999999999999998655 456666665543221111
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHH-H--HHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELY-E--KLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
.+...++++.+.... .....+.+++.... . ............++.++++.+|+.. ..++++.+|
T Consensus 73 ------~~~~~i~~~~q~~~~------~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 139 (255)
T PRK11231 73 ------QLARRLALLPQHHLT------PEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINH-LADRRLTDL 139 (255)
T ss_pred ------HHhhheEEecccCCC------CCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHH-HHcCCcccC
Confidence 111222332221111 00111222221100 0 0001112234567888999999964 457899999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
||||+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+|||+++++.++||+|++|++|+++ +
T Consensus 140 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~ 218 (255)
T PRK11231 140 SGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVM-A 218 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEE-E
Confidence 999999999999999999999999999999999999999998764 579999999999999999999999999996 4
Q ss_pred cCChhhH
Q 048654 399 RGNFDDF 405 (723)
Q Consensus 399 ~g~~~~~ 405 (723)
.|+++++
T Consensus 219 ~~~~~~~ 225 (255)
T PRK11231 219 QGTPEEV 225 (255)
T ss_pred EcCHHHh
Confidence 5666554
No 312
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-37 Score=319.94 Aligned_cols=209 Identities=24% Similarity=0.347 Sum_probs=164.7
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS--P---TEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~--p---~~G~I~~~~~------- 559 (723)
..++|+++|+++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++ | ++|+|.+++.
T Consensus 9 ~~~~l~i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~ 86 (259)
T PRK14274 9 KQEVYQINGMNLWYGQH--HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKV 86 (259)
T ss_pred CCceEEEeeEEEEECCe--eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccccc
Confidence 45789999999999753 58999999999999999999999999999999999987 3 5899987653
Q ss_pred ------eeEEEEccccccccCccccHHHHHH---hhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHH
Q 048654 560 ------LRIGRYSQHFVDLLTMEETPVSYLL---RLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKAR 627 (723)
Q Consensus 560 ------~~ig~~~q~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqR 627 (723)
..++|++|.... +. .+....+. ..+...........+..+++.+++.. ....+++.+||||||||
T Consensus 87 ~~~~~~~~i~~v~q~~~~-~~--~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qr 163 (259)
T PRK14274 87 DLVELRKNIGMVFQKGNP-FP--QSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQR 163 (259)
T ss_pred CHHHHhhceEEEecCCcc-cc--cCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHH
Confidence 237899987421 11 12222221 11110000011234667888998853 12346778999999999
Q ss_pred HHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCC
Q 048654 628 VVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGT 705 (723)
Q Consensus 628 v~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~ 705 (723)
|+|||+|+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|++|+++. .|+
T Consensus 164 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d-----~i~~l~~G~i~~-~g~ 237 (259)
T PRK14274 164 LCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSD-----QTAFFYMGELVE-CND 237 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCC-----EEEEEECCEEEE-ECC
Confidence 999999999999999999999999999999999999874 689999999999999995 999999999975 588
Q ss_pred HHHHHH
Q 048654 706 FEEYKE 711 (723)
Q Consensus 706 ~~~~~~ 711 (723)
++++..
T Consensus 238 ~~~~~~ 243 (259)
T PRK14274 238 TNKMFS 243 (259)
T ss_pred HHHHhh
Confidence 887643
No 313
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=320.65 Aligned_cols=223 Identities=19% Similarity=0.284 Sum_probs=163.5
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCC--C-CCCcEEEEEeeeeecCCChHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKI--P-VPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~--~-~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
..+|+++|++++|+++++|+|+||+|.+|++++|+|+|||||||||++|+|+.. + .|..|.|.+.++.+......
T Consensus 19 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~-- 96 (268)
T PRK14248 19 EHILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN-- 96 (268)
T ss_pred CceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc--
Confidence 346999999999998999999999999999999999999999999999999753 2 25677887777655321110
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQG 315 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~ 315 (723)
...++..++++.+.... . ...+.+++..... .... ........+.++++.+++.. ...+
T Consensus 97 ---------~~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 159 (268)
T PRK14248 97 ---------VVNLRREIGMVFQKPNP------F-PKSIYNNITHALK-YAGERRKSVLDEIVEESLTKAALWDEVKDRLH 159 (268)
T ss_pred ---------HHHHhccEEEEecCCcc------C-cccHHHHHHHHHH-hcCCCcHHHHHHHHHHHHHHcCCCcchHHHHh
Confidence 00112223333221110 0 0122222221111 1111 11223456778888888742 2346
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+||||||||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 160 ~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G 239 (268)
T PRK14248 160 SSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNG 239 (268)
T ss_pred cCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999999876 479999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++. .|+.+++
T Consensus 240 ~i~~-~~~~~~~ 250 (268)
T PRK14248 240 DLVE-YDQTEQI 250 (268)
T ss_pred EEEE-eCCHHHH
Confidence 9975 4666554
No 314
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=316.28 Aligned_cols=221 Identities=23% Similarity=0.302 Sum_probs=163.7
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++|+++.|+++++|+|+||+|++|++++|+|+|||||||||++|+|+..+. +..|+|.+.+..+.....
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~----- 77 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQL----- 77 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchh-----
Confidence 689999999999889999999999999999999999999999999999986542 356788776654432110
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
....++..++++.+.... . ...+.+++..... ..... ....+..+.++++.+|+.. ...+++
T Consensus 78 ------~~~~~~~~i~~~~q~~~~------~-~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14262 78 ------DVTEYRKKVGMVFQKPTP------F-PMSIYDNVAFGPR-IHGVKSKHKLDRIVEESLKKAALWDEVKSELNKP 143 (250)
T ss_pred ------hHHHhhhhEEEEecCCcc------C-cccHHHHHHHHHH-HcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCC
Confidence 001122233333221110 0 1122233222111 11111 1233456788899998853 235788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||+||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|++
T Consensus 144 ~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i 223 (250)
T PRK14262 144 GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGEL 223 (250)
T ss_pred hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999875 47999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+.+++
T Consensus 224 ~~-~g~~~~~ 232 (250)
T PRK14262 224 IE-YGPTREI 232 (250)
T ss_pred EE-ecCHHHH
Confidence 74 4666554
No 315
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-37 Score=319.85 Aligned_cols=207 Identities=27% Similarity=0.352 Sum_probs=163.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc----------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK---------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~---------- 559 (723)
+|+++|+++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 68999999999753 589999999999999999999999999999999999974 7999987652
Q ss_pred ---eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ---~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|... ...++.++.... .............+.+..+++.+|+.. ....+++.+|||||||||+||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAG-LKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIA 160 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHH
Confidence 24789998642 223333332111 111111000012345677899999842 223467799999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEE------CCeEEecC
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVE------NGTVSRFP 703 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~------~G~i~~~~ 703 (723)
|||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| +|++|+ +|+|+. .
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d-----~i~~l~~~~~~~~g~i~~-~ 234 (258)
T PRK14241 161 RAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSD-----QTAFFNLEATGKPGRLVE-I 234 (258)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEEecccCCCCceEEe-c
Confidence 99999999999999999999999999999998874 689999999999999995 999997 799975 5
Q ss_pred CCHHHHH
Q 048654 704 GTFEEYK 710 (723)
Q Consensus 704 g~~~~~~ 710 (723)
|+++++.
T Consensus 235 ~~~~~~~ 241 (258)
T PRK14241 235 DDTEKIF 241 (258)
T ss_pred CCHHHHH
Confidence 7887764
No 316
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.2e-37 Score=312.65 Aligned_cols=193 Identities=33% Similarity=0.493 Sum_probs=154.7
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++....+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (220)
T cd03245 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGY 82 (220)
T ss_pred EEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEE
Confidence 6899999999753345899999999999999999999999999999999999999999998763 24889
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCc----------CCCCCCCHHHHHHHHHHHHH
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHL----------TPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~----------~~i~~LSGGqkqRv~lAral 634 (723)
++|+... +. .+..+.+ ...... .....+..+++.+++...... ..+.+|||||||||+|||||
T Consensus 83 ~~q~~~~-~~--~tv~e~l-~~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al 155 (220)
T cd03245 83 VPQDVTL-FY--GTLRDNI-TLGAPL---ADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARAL 155 (220)
T ss_pred eCCCCcc-cc--chHHHHh-hcCCCC---CCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHH
Confidence 9987421 11 2333322 111111 123446677787887543221 13469999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++ .+|| ++++|++|+++.
T Consensus 156 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d-----~v~~l~~g~i~~ 218 (220)
T cd03245 156 LNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVD-----RIIVMDSGRIVA 218 (220)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCC-----EEEEEeCCeEee
Confidence 99999999999999999999999999999875 5899999999987 6884 999999999864
No 317
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.5e-36 Score=316.91 Aligned_cols=225 Identities=22% Similarity=0.292 Sum_probs=160.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeee-----ecCCChHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQE-----VVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~-----~~~~~~~~~ 239 (723)
+|+++|+++.|+++.+|+|+||+|++|++++|+|+|||||||||++|+|+..| .+|+|.+.+.+ +........
T Consensus 3 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccccccccccCCHHHH
Confidence 58999999999988999999999999999999999999999999999998765 45666665433 211111000
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
. ..+...++++.+..... ........+.+......+..........++.++++.+|+.....++.+.
T Consensus 81 ~---------~~~~~~i~~~~q~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~ 147 (253)
T TIGR02323 81 R---------RLMRTEWGFVHQNPRDG----LRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPR 147 (253)
T ss_pred H---------HhhhcceEEEEeCcccc----cCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCch
Confidence 0 00111223322211000 0000111112211111111011123346788999999996435578999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
.|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||++++|++|++
T Consensus 148 ~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i 227 (253)
T TIGR02323 148 AFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRV 227 (253)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999988753 57999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+.+++
T Consensus 228 ~~-~~~~~~~ 236 (253)
T TIGR02323 228 VE-SGLTDQV 236 (253)
T ss_pred EE-ECCHHHH
Confidence 74 4665554
No 318
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-36 Score=317.86 Aligned_cols=209 Identities=27% Similarity=0.324 Sum_probs=163.9
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~-------- 559 (723)
+++|+++|+++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 2 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 79 (251)
T PRK14270 2 KIKMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVD 79 (251)
T ss_pred ccEEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccccc
Confidence 478999999999975 3589999999999999999999999999999999999875 7999987652
Q ss_pred -----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|...-. .++.++.. +................+..+++.+++.. ....+++.+|||||||||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~tv~enl~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 158 (251)
T PRK14270 80 VVELRKRVGMVFQKPNPFPMSIYDNVA-YGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCI 158 (251)
T ss_pred HHHHHhheEEEecCCCcCCCcHHHHHH-hHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 2489999874211 22222221 11111110000011245677899998742 12345678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||+|+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|++++
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d-----~v~~l~~G~i~~-~~~~~~ 232 (251)
T PRK14270 159 ARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSD-----YTAFFLMGDLIE-FNKTEK 232 (251)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcC-----EEEEEECCeEEE-eCCHHH
Confidence 999999999999999999999999999999998873 689999999999999995 999999999985 477776
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 233 ~~ 234 (251)
T PRK14270 233 IF 234 (251)
T ss_pred Hh
Confidence 54
No 319
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=9.1e-37 Score=352.47 Aligned_cols=212 Identities=29% Similarity=0.474 Sum_probs=172.0
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccc--
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFV-- 570 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~-- 570 (723)
..+|+++||+++|++. ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++...++|++|++.
T Consensus 2 ~~~i~~~nls~~~~~~-~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~ 80 (552)
T TIGR03719 2 QYIYTMNRVSKVVPPK-KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLD 80 (552)
T ss_pred cEEEEEeeEEEecCCC-CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCC
Confidence 3589999999999722 3589999999999999999999999999999999999999999999877678999999742
Q ss_pred cccCccccHHHHHHhh-------------CCCCCC---------------------CcHHHHHHHHHHhCCCCCCCCcCC
Q 048654 571 DLLTMEETPVSYLLRL-------------HPDQEG---------------------LSKQEAVRAKLGKFGLPSHNHLTP 616 (723)
Q Consensus 571 ~~~~~~~~~~~~~~~~-------------~~~~~~---------------------~~~~~~~~~~L~~~gl~~~~~~~~ 616 (723)
+.+++.++....+... +..... ......+..++..+|+.. .+++
T Consensus 81 ~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~ 158 (552)
T TIGR03719 81 PTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPP--WDAD 158 (552)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCc--ccCc
Confidence 2334444322111000 000000 001134566788888853 3467
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEEC
Q 048654 617 IAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVEN 696 (723)
Q Consensus 617 i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~ 696 (723)
+.+|||||||||+|||+|+.+|+||||||||+|||+.++..|.+.|+++++|||+||||++++..+|| +|++|++
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d-----~v~~l~~ 233 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAG-----WILELDR 233 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcC-----eEEEEEC
Confidence 89999999999999999999999999999999999999999999999998899999999999999995 9999999
Q ss_pred CeEEecCCCHHHHHHH
Q 048654 697 GTVSRFPGTFEEYKED 712 (723)
Q Consensus 697 G~i~~~~g~~~~~~~~ 712 (723)
|+++.+.|++++|.+.
T Consensus 234 g~i~~~~g~~~~~~~~ 249 (552)
T TIGR03719 234 GRGIPWEGNYSSWLEQ 249 (552)
T ss_pred CEEEEecCCHHHHHHH
Confidence 9987788999887654
No 320
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=284.32 Aligned_cols=226 Identities=23% Similarity=0.346 Sum_probs=179.7
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
.|+++|+++.||...+|-||+|+.+.|+.+.|+||+|+|||||+|.|+-+..|..| ...+.++........
T Consensus 2 sirv~~in~~yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg--~l~ia~~~fd~s~~~------- 72 (242)
T COG4161 2 SIQLNGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSG--TLNIAGNHFDFSKTP------- 72 (242)
T ss_pred ceEEcccccccccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCC--eEEecccccccccCc-------
Confidence 48999999999999999999999999999999999999999999999955555444 443333332211111
Q ss_pred hhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 245 AHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
.......+++.++++ ++..++ +...+.+++.+.......+..+++..++.++|.++.+.+ ..++.+-.|||
T Consensus 73 ~~k~i~~lr~~vgmvfqqy~lw-------phltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~-~adr~plhlsg 144 (242)
T COG4161 73 SDKAIRDLRRNVGMVFQQYNLW-------PHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKP-YADRYPLHLSG 144 (242)
T ss_pred cHHHHHHHHHhhhhhhhhhccC-------chhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhcccc-ccccCceeccc
Confidence 113445677777765 333332 344555666555555555667788899999999999974 56899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||+|||+|||||+++|++||+||||++|||+-...+.++|+++ |.|-++|||..+++..++.+|++|++|+|+. .|
T Consensus 145 gqqqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive-~g 223 (242)
T COG4161 145 GQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVE-QG 223 (242)
T ss_pred chhhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEe-ec
Confidence 9999999999999999999999999999999888888887765 6799999999999999999999999999975 58
Q ss_pred ChhhHHhh
Q 048654 401 NFDDFESG 408 (723)
Q Consensus 401 ~~~~~~~~ 408 (723)
+.+.|...
T Consensus 224 ~a~~ft~p 231 (242)
T COG4161 224 DASCFTEP 231 (242)
T ss_pred chhhccCc
Confidence 77766543
No 321
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=317.31 Aligned_cols=208 Identities=25% Similarity=0.347 Sum_probs=162.8
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcC---CCC--CcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGD---LSP--TEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl---~~p--~~G~I~~~~~--------- 559 (723)
++|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+ ++| ++|+|.+++.
T Consensus 2 ~~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 2 VKIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred cEEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 68999999999975 3589999999999999999999999999999999997 455 5899987652
Q ss_pred ----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|...-. .++.++.. +................+.++++.+|+... ...+++.+|||||||||+||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVA-YGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIA 158 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHH-HHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHH
Confidence 1488999874211 12222221 111111100000123457788999998531 23466789999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|+++++
T Consensus 159 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d-----~v~~l~~G~~~~-~~~~~~~ 232 (250)
T PRK14245 159 RAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSD-----KTAFFYMGEMVE-YDDTKKI 232 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCC-----EEEEEECCEEEE-ECCHHHH
Confidence 99999999999999999999999999999998874 589999999999999995 999999999975 5787776
Q ss_pred H
Q 048654 710 K 710 (723)
Q Consensus 710 ~ 710 (723)
.
T Consensus 233 ~ 233 (250)
T PRK14245 233 F 233 (250)
T ss_pred h
Confidence 4
No 322
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1e-37 Score=309.54 Aligned_cols=204 Identities=28% Similarity=0.536 Sum_probs=173.1
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------eeEEEEcc
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-------LRIGRYSQ 567 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-------~~ig~~~q 567 (723)
+|++++|+++|++. .+++||||+|++|+++|++|+|||||||.+|+|.|++.|++|+|.+++. .+|||+|.
T Consensus 2 ~L~ie~vtK~Fg~k--~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPE 79 (300)
T COG4152 2 ALEIEGVTKSFGDK--KAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPE 79 (300)
T ss_pred ceEEecchhccCce--eeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChh
Confidence 58999999999864 5899999999999999999999999999999999999999999999884 37999987
Q ss_pred c--cccccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 568 H--FVDLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 568 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
. +...+++.+. +.|+..+ .|+. ....+..||+++++..... +++.+||-|++|++.|..+++++|++||
T Consensus 80 ERGLy~k~tv~dq-l~yla~L----kGm~~~e~~~~~~~wLer~~i~~~~~-~kIk~LSKGnqQKIQfisaviHePeLlI 153 (300)
T COG4152 80 ERGLYPKMTVEDQ-LKYLAEL----KGMPKAEIQKKLQAWLERLEIVGKKT-KKIKELSKGNQQKIQFISAVIHEPELLI 153 (300)
T ss_pred hhccCccCcHHHH-HHHHHHh----cCCcHHHHHHHHHHHHHhcccccccc-chHHHhhhhhhHHHHHHHHHhcCCCEEE
Confidence 4 2333343332 2232222 2332 3456788999999987664 6899999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
||||++||||.+.+.|.+++.+++ .|||++||.|+.++++|| ++++|++|+.+ +.|+.+.++..
T Consensus 154 LDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD-----~llmL~kG~~V-~~G~v~~ir~~ 220 (300)
T COG4152 154 LDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCD-----RLLMLKKGQTV-LYGTVEDIRRS 220 (300)
T ss_pred ecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhh-----hhheecCCceE-EeccHHHHHHh
Confidence 999999999999999999998774 699999999999999995 89999999997 46999888764
No 323
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=322.56 Aligned_cols=207 Identities=26% Similarity=0.336 Sum_probs=164.9
Q ss_pred CeEEEEEEEEEcCCC-cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------ee
Q 048654 494 PLLQLIEVSFSYPNR-EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~-~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ 561 (723)
++|+++||++.|++. ...+|+||||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 82 (277)
T PRK13642 3 KILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRK 82 (277)
T ss_pred ceEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcc
Confidence 379999999999742 235899999999999999999999999999999999999999999988763 24
Q ss_pred EEEEccccc---cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFV---DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|+.. ...++.++... ..... ........+.+..+++.+||.... .+++..|||||||||+|||||+.+|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~-~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~lAraL~~~p 159 (277)
T PRK13642 83 IGMVFQNPDNQFVGATVEDDVAF-GMENQ-GIPREEMIKRVDEALLAVNMLDFK-TREPARLSGGQKQRVAVAGIIALRP 159 (277)
T ss_pred eEEEEECHHHhhccCCHHHHHHh-hHHHc-CCCHHHHHHHHHHHHHHCCCHhHh-hCCcccCCHHHHHHHHHHHHHHcCC
Confidence 899999742 22333333211 11111 110001124567889999997544 4677999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+||||||||++||+.++..+.++|.++ +.|||+||||++++. .| |+|++|++|+++. .|+++++.
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~-----d~i~~l~~G~i~~-~g~~~~~~ 228 (277)
T PRK13642 160 EIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SS-----DRILVMKAGEIIK-EAAPSELF 228 (277)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hC-----CEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999766 468999999999996 58 4999999999975 57777754
No 324
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=315.66 Aligned_cols=220 Identities=22% Similarity=0.289 Sum_probs=163.3
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCC-ChHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGD-DRSAI 239 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~-~~~~~ 239 (723)
+.|+++|+++.|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..+. +..|.|.+.+.++... +..
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~-- 79 (249)
T PRK14253 2 NKFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA-- 79 (249)
T ss_pred CeEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH--
Confidence 3589999999999999999999999999999999999999999999999987653 3467887766654211 111
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---cccC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQG 315 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~ 315 (723)
.++..++++.+.... . ...+.+++..... ..... .....+++.++++.+|+.. ...+
T Consensus 80 -----------~~~~~i~~~~q~~~~------~-~~tv~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (249)
T PRK14253 80 -----------DLRIKVGMVFQKPNP------F-PMSIYENVAYGLR-AQGIKDKKVLDEVVERSLRGAALWDEVKDRLK 140 (249)
T ss_pred -----------HHHhheeEEecCCCc------C-cccHHHHHHhHHH-hcCCCchHHHHHHHHHHHHHcCCchhhhHHhh
Confidence 112223333221110 0 1122222221111 11111 1233456778888888742 2346
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+|||||+|||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+|||+++++..+||+|++|++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G 220 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMG 220 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999999876 479999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++. .|+.+++
T Consensus 221 ~i~~-~g~~~~~ 231 (249)
T PRK14253 221 ELVE-HDDTQVI 231 (249)
T ss_pred EEEE-eCCHHHH
Confidence 9974 4665544
No 325
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=319.03 Aligned_cols=224 Identities=20% Similarity=0.267 Sum_probs=166.2
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
..+|+++|++++|+++++|+|+||+|.+|++++|+|+|||||||||++|+|+..| .|..|+|.+.+..+......
T Consensus 18 ~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~-- 95 (267)
T PRK14237 18 EIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN-- 95 (267)
T ss_pred CeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC--
Confidence 3469999999999999999999999999999999999999999999999998754 25678887776654311100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGR 316 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~ 316 (723)
...++..++++.+.... . ...+.+++.................++.++++.+++.. ...++
T Consensus 96 ---------~~~~~~~i~~v~q~~~~------~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~ 159 (267)
T PRK14237 96 ---------VYEMRKHIGMVFQRPNP------F-AKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHK 159 (267)
T ss_pred ---------hHHHhcceEEEecCCcc------c-cccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcC
Confidence 00112223333221110 0 01222333221111001112234567888899998842 23578
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|+
T Consensus 160 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 239 (267)
T PRK14237 160 SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGD 239 (267)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999876 4799999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++. .|+..++
T Consensus 240 i~~-~g~~~~~ 249 (267)
T PRK14237 240 LIE-YDKTRNI 249 (267)
T ss_pred EEE-eCCHHHH
Confidence 975 4776655
No 326
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.5e-37 Score=310.74 Aligned_cols=193 Identities=27% Similarity=0.388 Sum_probs=157.7
Q ss_pred CCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce--------eE
Q 048654 491 LTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL--------RI 562 (723)
Q Consensus 491 ~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~--------~i 562 (723)
.++++|+++|++++|+++ .+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.. .+
T Consensus 7 ~~~~~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i 84 (214)
T PRK13543 7 TAPPLLAAHALAFSRNEE--PVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFM 84 (214)
T ss_pred CCcceEEEeeEEEecCCc--eeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhce
Confidence 346799999999999753 48999999999999999999999999999999999999999999987632 37
Q ss_pred EEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 563 GRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 563 g~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|++|... ..+++.++... ..... +....+.++.++..+++.... ++++..|||||||||+|||+++.+|+|
T Consensus 85 ~~~~q~~~~~~~~t~~e~l~~-~~~~~----~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~l 158 (214)
T PRK13543 85 AYLGHLPGLKADLSTLENLHF-LCGLH----GRRAKQMPGSALAIVGLAGYE-DTLVRQLSAGQKKRLALARLWLSPAPL 158 (214)
T ss_pred EEeecCcccccCCcHHHHHHH-HHHhc----CCcHHHHHHHHHHHcCChhhc-cCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 88888632 12223222211 11111 112345577899999997654 467799999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEEC
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVEN 696 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~ 696 (723)
|||||||++||+.+++.+.++|.++ +.|||+||||++++.++|+ ++|+++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~-----~i~~l~~ 212 (214)
T PRK13543 159 WLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRT-----RMLTLEA 212 (214)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcc-----eEEEEee
Confidence 9999999999999999999999876 5799999999999999995 8998863
No 327
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.1e-36 Score=348.65 Aligned_cols=206 Identities=26% Similarity=0.366 Sum_probs=168.6
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------e
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------L 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~ 560 (723)
.++|+++|+++.|++. .+|+||||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. .
T Consensus 9 ~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 9 PPLLCARSISKQYSGV--EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQL 86 (510)
T ss_pred CceEEEEeEEEEeCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhC
Confidence 4689999999999753 5899999999999999999999999999999999999999999998763 2
Q ss_pred eEEEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 561 RIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 561 ~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
.++|++|... +....+..+.+. +.... .....+.+.++++.+||.... ++++.+|||||||||+|||||+.+|+|
T Consensus 87 ~i~~v~q~~~--~~~~~tv~e~l~-~~~~~-~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~aL~~~p~l 161 (510)
T PRK15439 87 GIYLVPQEPL--LFPNLSVKENIL-FGLPK-RQASMQKMKQLLAALGCQLDL-DSSAGSLEVADRQIVEILRGLMRDSRI 161 (510)
T ss_pred CEEEEeccCc--cCCCCcHHHHhh-ccccc-chHHHHHHHHHHHHcCCCccc-cCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 4899999742 111122222221 11110 111245678899999997554 467899999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+|+ +.|+++++..
T Consensus 162 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d-----~i~~l~~G~i~-~~g~~~~~~~ 229 (510)
T PRK15439 162 LILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLAD-----RISVMRDGTIA-LSGKTADLST 229 (510)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEE-EecChHHcCH
Confidence 9999999999999999999999876 3689999999999999995 99999999997 4688877643
No 328
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=321.61 Aligned_cols=218 Identities=18% Similarity=0.286 Sum_probs=162.5
Q ss_pred ceEEEeEEEEeCC---eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARG---KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~---~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++|++++|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+..| ..|.|.+.+..+......
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~---- 77 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLLTEENVW---- 77 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECCcCcHH----
Confidence 5899999999963 4699999999999999999999999999999999998765 456677766654321111
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
.++..++++.+.... ......+.+++..... ...........++.++++.+|+.. ..++++.+|
T Consensus 78 ---------~~~~~i~~v~q~~~~-----~~~~~tv~eni~~~~~-~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~L 141 (279)
T PRK13650 78 ---------DIRHKIGMVFQNPDN-----QFVGATVEDDVAFGLE-NKGIPHEEMKERVNEALELVGMQD-FKEREPARL 141 (279)
T ss_pred ---------HHHhhceEEEcChHH-----hcccccHHHHHHhhHH-hCCCCHHHHHHHHHHHHHHCCCHh-HhhCCcccC
Confidence 112233333221100 0001122233321111 111233345567899999999974 457999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++. +||+|++|++|+++.
T Consensus 142 SgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~ 220 (279)
T PRK13650 142 SGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVES 220 (279)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999988754 679999999999995 799999999999964
Q ss_pred ecCChhhHH
Q 048654 398 YRGNFDDFE 406 (723)
Q Consensus 398 ~~g~~~~~~ 406 (723)
.|+.+++.
T Consensus 221 -~g~~~~~~ 228 (279)
T PRK13650 221 -TSTPRELF 228 (279)
T ss_pred -ECCHHHHH
Confidence 57766553
No 329
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=315.94 Aligned_cols=222 Identities=22% Similarity=0.293 Sum_probs=164.7
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
++|+++|+++.|+++++|+|+||+|.+|++++|+|+|||||||||++|+|+..|. +..|.|.+.+..+......
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~--- 79 (251)
T PRK14270 3 IKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVD--- 79 (251)
T ss_pred cEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccccc---
Confidence 4689999999999889999999999999999999999999999999999986543 2567887776654321100
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQGR 316 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~ 316 (723)
...++..++++.+.... . ...+.+++.... ..... .......++.++++.+|+.. ...++
T Consensus 80 --------~~~~~~~i~~~~q~~~~------~-~~tv~enl~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 143 (251)
T PRK14270 80 --------VVELRKRVGMVFQKPNP------F-PMSIYDNVAYGP-RIHGIKDKKELDKIVEWALKKAALWDEVKDDLKK 143 (251)
T ss_pred --------HHHHHhheEEEecCCCc------C-CCcHHHHHHhHH-HhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhC
Confidence 01112233333322111 0 112222222111 11111 12234566788999998742 23468
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|+
T Consensus 144 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~ 223 (251)
T PRK14270 144 SALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGD 223 (251)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCe
Confidence 89999999999999999999999999999999999999999999999876 4799999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++.+ |+.+++
T Consensus 224 i~~~-~~~~~~ 233 (251)
T PRK14270 224 LIEF-NKTEKI 233 (251)
T ss_pred EEEe-CCHHHH
Confidence 9754 666554
No 330
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=316.26 Aligned_cols=221 Identities=25% Similarity=0.334 Sum_probs=163.3
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+. +..|+|.+.++.+......
T Consensus 4 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~---- 79 (251)
T PRK14251 4 IISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMD---- 79 (251)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccch----
Confidence 589999999999899999999999999999999999999999999999987521 3577888777654321110
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... . ...+.+++..... ..... .+....++.++++.+++.. ...+++
T Consensus 80 -------~~~~~~~i~~~~q~~~~------~-~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 144 (251)
T PRK14251 80 -------LVELRKEVGMVFQQPTP------F-PFSVYDNVAYGLK-IAGVKDKELIDQRVEESLKQAAIWKETKDNLDRN 144 (251)
T ss_pred -------HHHhhccEEEEecCCcc------C-CCcHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccC
Confidence 00112223333221110 0 1122232221111 11111 1223456788899999841 234688
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||+||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|++
T Consensus 145 ~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i 224 (251)
T PRK14251 145 AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDL 224 (251)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876 57999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+.. |+.+++
T Consensus 225 ~~~-~~~~~~ 233 (251)
T PRK14251 225 IEA-GPTEEM 233 (251)
T ss_pred EEe-CCHHHH
Confidence 754 665544
No 331
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=317.14 Aligned_cols=208 Identities=22% Similarity=0.347 Sum_probs=162.9
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS--P---TEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~--p---~~G~I~~~~~--------- 559 (723)
..|+++|+++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++ | ++|+|++++.
T Consensus 3 ~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 80 (252)
T PRK14256 3 NKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP 80 (252)
T ss_pred cEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh
Confidence 36899999999975 358999999999999999999999999999999999986 4 6899987652
Q ss_pred ----eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 ----~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|+.. ...++.++.... ...............+.++++.+++.. .....++.+|||||||||+|
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 159 (252)
T PRK14256 81 VSIRRRVGMVFQKPNPFPAMSIYDNVIAG-YKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCI 159 (252)
T ss_pred HHhhccEEEEecCCCCCCcCcHHHHHHhH-HHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHH
Confidence 23789998742 222333332111 111110000012345678889999853 12235678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| ++++|++|+|+. .|+.++
T Consensus 160 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~ 233 (252)
T PRK14256 160 ARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSD-----YTAFFYMGDLVE-CGETKK 233 (252)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCC-----EEEEEECCEEEE-eCCHHH
Confidence 999999999999999999999999999999998873 689999999999999995 999999999975 477776
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 234 ~~ 235 (252)
T PRK14256 234 IF 235 (252)
T ss_pred HH
Confidence 53
No 332
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.7e-36 Score=311.64 Aligned_cols=212 Identities=27% Similarity=0.339 Sum_probs=156.7
Q ss_pred cceEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 164 KDITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 164 ~~I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
++|+++||+++|++ .++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|.|.+.+..+...+....
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~ 82 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPLHQMDEEAR 82 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEcccCCHHHH
Confidence 36999999999975 3699999999999999999999999999999999998654 55677776665432221110
Q ss_pred HHHHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 240 QAVVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 240 ~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
...+ ..++++.+.... .....+.+++.... .+.........+++.++++.+|+.. ..++++
T Consensus 83 ----------~~~~~~~i~~~~q~~~l------~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~ 144 (228)
T PRK10584 83 ----------AKLRAKHVGFVFQSFML------IPTLNALENVELPA-LLRGESSRQSRNGAKALLEQLGLGK-RLDHLP 144 (228)
T ss_pred ----------HHHHhheEEEEEccccc------CCCcCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCHh-HhhCCh
Confidence 0011 122333221110 00112222222111 1111222344567899999999974 457889
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
.+||||||||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++.. ||++++|++|+
T Consensus 145 ~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~ 223 (228)
T PRK10584 145 AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQ 223 (228)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999754 5799999999999865 99999999999
Q ss_pred EE
Q 048654 395 LH 396 (723)
Q Consensus 395 i~ 396 (723)
++
T Consensus 224 i~ 225 (228)
T PRK10584 224 LQ 225 (228)
T ss_pred EE
Confidence 85
No 333
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.1e-38 Score=302.97 Aligned_cols=223 Identities=20% Similarity=0.327 Sum_probs=172.0
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
..+.++|+.|+|+.+.|+++|||+|++||++||+|||||||||.+.++.|+.. |++|.|.+.+.++...+....
T Consensus 3 ~~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~R---- 76 (243)
T COG1137 3 STLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKR---- 76 (243)
T ss_pred cEEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHH----
Confidence 35889999999999999999999999999999999999999999999999865 456778888877765432211
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
-+--++++++-... +....+.+++..+.+....- ...+.+.+++.+|+.|++. +..+.+..+||
T Consensus 77 --------ArlGigYLpQE~SI------Fr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~-hlr~~~a~sLS 141 (243)
T COG1137 77 --------ARLGIGYLPQEASI------FRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHIT-HLRDSKAYSLS 141 (243)
T ss_pred --------hhcCcccccccchH------hhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchH-HHhcCcccccc
Confidence 11122333221110 11223344444444432211 1123345678999999997 46689999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh---cCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR---WKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~---~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
||||+|+.|||||+.+|++|||||||+|.||-++..++.++.. .+..|+++.|+..+...+|||.++|.+|++. ..
T Consensus 142 GGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vl-a~ 220 (243)
T COG1137 142 GGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVL-AE 220 (243)
T ss_pred cchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEE-ec
Confidence 9999999999999999999999999999999988877776654 4789999999999999999999999999996 46
Q ss_pred CChhhHHhh
Q 048654 400 GNFDDFESG 408 (723)
Q Consensus 400 g~~~~~~~~ 408 (723)
|+++++..+
T Consensus 221 G~p~ei~~n 229 (243)
T COG1137 221 GSPEEIVNN 229 (243)
T ss_pred CCHHHHhcC
Confidence 998887654
No 334
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=316.47 Aligned_cols=222 Identities=23% Similarity=0.346 Sum_probs=162.9
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..|.+ ..|+|.+.+..+.......
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~--- 80 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP--- 80 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH---
Confidence 5899999999999999999999999999999999999999999999999876654 3678877766543211000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
..++..++++.+.... .....+.+++..... .... ......+++.+++..+++.. ...+++
T Consensus 81 --------~~~~~~i~~~~q~~~~------~~~~t~~enl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 145 (252)
T PRK14272 81 --------VAMRRRVGMVFQKPNP------FPTMSVFDNVVAGLK-LAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTP 145 (252)
T ss_pred --------HHhhceeEEEeccCcc------CcCCCHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCC
Confidence 0112223333221110 001122233321111 1111 12233456677777776531 234688
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|++
T Consensus 146 ~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i 225 (252)
T PRK14272 146 ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDL 225 (252)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876 47999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+.+++
T Consensus 226 ~~-~~~~~~~ 234 (252)
T PRK14272 226 VE-HGPTDQL 234 (252)
T ss_pred EE-eCCHHHH
Confidence 64 5666554
No 335
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=316.65 Aligned_cols=208 Identities=24% Similarity=0.335 Sum_probs=162.5
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~--------- 559 (723)
++|+++|+++.|+. ..+|+++||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 3 NIISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred ceEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 57999999999975 358999999999999999999999999999999999997 47999987653
Q ss_pred ----eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ----~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|...- ..++.++... ................+..+++.+++.. ....+++.+|||||||||+||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 159 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAY-GLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIA 159 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHH-HHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHH
Confidence 137889887421 1233333211 1111110000001245677888899842 122456789999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+|| +|++|++|+++. .|+.+++
T Consensus 160 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~ 233 (251)
T PRK14251 160 RALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISD-----QTAFLMNGDLIE-AGPTEEM 233 (251)
T ss_pred HHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcC-----EEEEEECCEEEE-eCCHHHH
Confidence 9999999999999999999999999999999887 4689999999999999995 999999999975 4777665
Q ss_pred H
Q 048654 710 K 710 (723)
Q Consensus 710 ~ 710 (723)
.
T Consensus 234 ~ 234 (251)
T PRK14251 234 F 234 (251)
T ss_pred H
Confidence 3
No 336
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-37 Score=299.35 Aligned_cols=213 Identities=27% Similarity=0.405 Sum_probs=167.8
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce-----------eEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL-----------RIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~-----------~ig 563 (723)
||+++|++++..++ .+|++|||++.+||+++|+||||||||||||.|+|.+.|++|++.+++.. ..+
T Consensus 1 mi~a~nls~~~~Gr--~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~ra 78 (259)
T COG4559 1 MIRAENLSYSLAGR--RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRA 78 (259)
T ss_pred CeeeeeeEEEeecc--eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhh
Confidence 68999999999765 48999999999999999999999999999999999999999999988742 356
Q ss_pred EEccccccccCccccHHHHHHhhCCCCCCC---cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc----
Q 048654 564 RYSQHFVDLLTMEETPVSYLLRLHPDQEGL---SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS---- 636 (723)
Q Consensus 564 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~---- 636 (723)
.++|+..-.|.+.-..+.. +...+...+. .+.+.++++|...++.+... +.+.+|||||||||.|||+|++
T Consensus 79 VlpQ~s~laFpFtv~eVV~-mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~-R~y~~LSGGEqQRVqlARvLaQl~~~ 156 (259)
T COG4559 79 VLPQNSSLAFPFTVQEVVQ-MGRIPHRSGREPEEDERIAAQALAATDLSGLAG-RDYRTLSGGEQQRVQLARVLAQLWPP 156 (259)
T ss_pred hcccCcccccceEHHHHHH-hcccccccCCCchhhHHHHHHHHHHcChhhhhc-cchhhcCchHHHHHHHHHHHHHccCC
Confidence 7788643222221111111 1222322221 23344788999999987654 5668999999999999999976
Q ss_pred --CCCeEEeccCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH-HH
Q 048654 637 --KPHILLLDEPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE-YK 710 (723)
Q Consensus 637 --~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~-~~ 710 (723)
++.+|+|||||+.||+..+..++++.+++. +.|++|-||++++..||| ||++|.+|+++. .|++++ +.
T Consensus 157 v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaD-----rivll~~Grv~a-~g~p~~vlt 230 (259)
T COG4559 157 VPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYAD-----RIVLLHQGRVIA-SGSPQDVLT 230 (259)
T ss_pred CCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhh-----eeeeeeCCeEee-cCCHHHhcC
Confidence 345999999999999999999999999984 579999999999999995 999999999985 688766 44
Q ss_pred HHHHHHH
Q 048654 711 EDLQREI 717 (723)
Q Consensus 711 ~~~~~~~ 717 (723)
.+.++.+
T Consensus 231 ~Etl~~v 237 (259)
T COG4559 231 DETLERV 237 (259)
T ss_pred HHHHHHH
Confidence 5555544
No 337
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=319.65 Aligned_cols=219 Identities=26% Similarity=0.336 Sum_probs=162.0
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.+|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|.|.+.+..+......
T Consensus 10 ~~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~------ 81 (265)
T PRK10575 10 TTFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPP--SEGEILLDAQPLESWSSK------ 81 (265)
T ss_pred ceEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEehhhCCHH------
Confidence 469999999999989999999999999999999999999999999999998654 456676666543211111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH-Hh--cCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL-QI--LGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~--~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
.++..++++.+.... .....+.+++....... .. ........++..+++.+|+.. ..++++.+
T Consensus 82 -------~~~~~i~~v~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~ 147 (265)
T PRK10575 82 -------AFARKVAYLPQQLPA------AEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKP-LAHRLVDS 147 (265)
T ss_pred -------HHhhheEEeccCCCC------CCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHH-HhcCCccc
Confidence 112223333221100 00112222221110000 00 011233567889999999964 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||||||+|||||+.+|+||||||||++||+.++..+.++|.++ +.|||+|||+++++..+||+|++|++|+++
T Consensus 148 LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~ 227 (265)
T PRK10575 148 LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMI 227 (265)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 9999999999999999999999999999999999999998888754 579999999999999999999999999996
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
..|+.+++
T Consensus 228 -~~~~~~~~ 235 (265)
T PRK10575 228 -AQGTPAEL 235 (265)
T ss_pred -EecCHHHh
Confidence 44665544
No 338
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=318.47 Aligned_cols=217 Identities=21% Similarity=0.232 Sum_probs=159.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.+|+++|++++|+++++|+++||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+...+...
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~----- 76 (237)
T PRK11614 4 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDITDWQTAK----- 76 (237)
T ss_pred cEEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEecCCCCHHH-----
Confidence 469999999999988999999999999999999999999999999999998755 4566777666543221110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhC-CCCccccCCCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGL-GFTKEMQGRPTKSFS 322 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~l-gl~~~~~~~~~~~LS 322 (723)
..+..++++.+.... .....+.+++.... ..........++.++++.+ ++.. ..++++.+||
T Consensus 77 -------~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~---~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~LS 139 (237)
T PRK11614 77 -------IMREAVAIVPEGRRV------FSRMTVEENLAMGG---FFAERDQFQERIKWVYELFPRLHE-RRIQRAGTMS 139 (237)
T ss_pred -------HHHhCEEEeccCccc------CCCCcHHHHHHHhh---hccChhHHHHHHHHHHHHHHHHHH-HHhCchhhCC
Confidence 011112222221100 00112222221110 0011122344567778877 4653 3467899999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
|||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||++|||++++..+||++++|++|+++ +.
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~ 218 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVV-LE 218 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEE-ee
Confidence 99999999999999999999999999999999999999988754 679999999999999999999999999996 45
Q ss_pred CChhhH
Q 048654 400 GNFDDF 405 (723)
Q Consensus 400 g~~~~~ 405 (723)
|+.+++
T Consensus 219 ~~~~~~ 224 (237)
T PRK11614 219 DTGDAL 224 (237)
T ss_pred CCHHHH
Confidence 776655
No 339
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=9.4e-37 Score=313.16 Aligned_cols=193 Identities=28% Similarity=0.440 Sum_probs=155.7
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------ee
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LR 561 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ 561 (723)
+++|+++||++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 5 ~~~i~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 5 SPLLQLQNVGYLAGDA--KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred CceEEEeccEEeeCCc--eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 4689999999999753 5899999999999999999999999999999999999999999988763 24
Q ss_pred EEEEccccccccCccccHHHHHH---hhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFVDLLTMEETPVSYLL---RLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|... .+ ..+....+. ..... ......+.++++.+++......+++.+|||||+|||+|||||+.+|
T Consensus 83 i~~~~q~~~-l~--~~tv~enl~~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (225)
T PRK10247 83 VSYCAQTPT-LF--GDTVYDNLIFPWQIRNQ---QPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMP 156 (225)
T ss_pred cEEEecccc-cc--cccHHHHHHhHHhhcCC---ChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 789998742 11 113222221 11111 1123457789999999643334678999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEE--CCeE
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVE--NGTV 699 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~--~G~i 699 (723)
+||||||||+|||+.++..+.++|.++ +.|||+||||++++. .|| ++++|+ .|+|
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d-----~i~~l~~~~~~~ 217 (225)
T PRK10247 157 KVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HAD-----KVITLQPHAGEM 217 (225)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCC-----EEEEEecccchH
Confidence 999999999999999999999999876 458999999999996 684 999996 4554
No 340
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=319.23 Aligned_cols=221 Identities=24% Similarity=0.342 Sum_probs=164.0
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++|+++.|+ ++++|+|+||+|.+|++++|+||||||||||+++|+|+..+ ..|+|.+.+..+.......
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~----- 73 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIKYDKKSL----- 73 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECccccchH-----
Confidence 378999999996 46799999999999999999999999999999999998654 4567777666543111100
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
..++..++++.+.... ......+.+++...... ..........++.++++.+|+.. ..++++.+|||
T Consensus 74 ------~~~~~~i~~v~q~~~~-----~~~~~tv~e~i~~~~~~-~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LS~ 140 (275)
T PRK13639 74 ------LEVRKTVGIVFQNPDD-----QLFAPTVEEDVAFGPLN-LGLSKEEVEKRVKEALKAVGMEG-FENKPPHHLSG 140 (275)
T ss_pred ------HHHHhheEEEeeChhh-----hhccccHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHCCCch-hhcCChhhCCH
Confidence 0112233333221100 00011222322211111 11222334567889999999964 55799999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||+||++|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+|++|++|+++. .|
T Consensus 141 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~-~g 219 (275)
T PRK13639 141 GQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIK-EG 219 (275)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eC
Confidence 9999999999999999999999999999999999999999865 5799999999999999999999999999975 47
Q ss_pred ChhhHH
Q 048654 401 NFDDFE 406 (723)
Q Consensus 401 ~~~~~~ 406 (723)
+.+++.
T Consensus 220 ~~~~~~ 225 (275)
T PRK13639 220 TPKEVF 225 (275)
T ss_pred CHHHHh
Confidence 776653
No 341
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=330.91 Aligned_cols=197 Identities=27% Similarity=0.360 Sum_probs=161.5
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK--------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~--------------- 559 (723)
||++ ||+++|++. .+ |+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 1 ~l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 1 MLEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred CeEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 4777 999999752 23 899999999999999999999999999999999999999987552
Q ss_pred eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 560 LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 560 ~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
..++|++|... ..+++.++.. + .... .....+.++++.+||.... ++++.+|||||||||+|||||+.+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~-~---~~~~----~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qRvalaraL~~~ 146 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLR-Y---GMAK----SMVAQFDKIVALLGIEPLL-DRYPGSLSGGEKQRVAIGRALLTA 146 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHH-h---hhhh----hhHHHHHHHHHHcCCchhh-hCCcccCCHHHHHHHHHHHHHHcC
Confidence 24889999742 2233333321 1 1111 1245688899999997554 466799999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+|| +|++|++|+++. .|+++++..
T Consensus 147 p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~i~~ 218 (352)
T PRK11144 147 PELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLAD-----RVVVLEQGKVKA-FGPLEEVWA 218 (352)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCC-----EEEEEeCCEEEE-ecCHHHHHh
Confidence 9999999999999999999999998875 3589999999999999995 999999999975 578877644
No 342
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=316.27 Aligned_cols=209 Identities=25% Similarity=0.346 Sum_probs=163.7
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~--------- 559 (723)
++|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 2 PIIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred ceEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 47999999999975 3589999999999999999999999999999999999984 8999987652
Q ss_pred ----eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ----~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|.... ..++.++... ................+..+++.+++... ...+++.+|||||+|||+||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 158 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAF-GPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIA 158 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHH-HHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHH
Confidence 248899986421 1222222211 11111100000122346778888888532 23467789999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| +|++|++|+++. .|+++++
T Consensus 159 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~ 232 (250)
T PRK14262 159 RALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIAD-----YIAFMYRGELIE-YGPTREI 232 (250)
T ss_pred HHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-ecCHHHH
Confidence 99999999999999999999999999999998874 689999999999999995 999999999974 5787776
Q ss_pred HH
Q 048654 710 KE 711 (723)
Q Consensus 710 ~~ 711 (723)
.+
T Consensus 233 ~~ 234 (250)
T PRK14262 233 VE 234 (250)
T ss_pred Hh
Confidence 53
No 343
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=322.46 Aligned_cols=210 Identities=26% Similarity=0.304 Sum_probs=163.8
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
+.++|+++||++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+.+ |++|+|.+++.
T Consensus 36 ~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~ 113 (286)
T PRK14275 36 GKPHVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFT 113 (286)
T ss_pred CceEEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhccc
Confidence 56789999999999753 48999999999999999999999999999999999864 49999987652
Q ss_pred ------eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ------~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|+..-. .++.++.. +....+.........+.+..+++.+++.. ....+++.+|||||||||+
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~tv~enl~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~ 192 (286)
T PRK14275 114 DEVLLRKKIGMVFQKPNPFPKSIFDNIA-YGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLC 192 (286)
T ss_pred chHHhhhcEEEECCCCCCCccCHHHHHH-hHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHH
Confidence 2488999874211 12222221 11111110000011345667888888742 2224567899999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| ++++|++|+++. .|+++
T Consensus 193 LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d-----~i~~L~~G~i~~-~g~~~ 266 (286)
T PRK14275 193 VARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSD-----YTMFFYEGVLVE-HAPTA 266 (286)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHH
Confidence 9999999999999999999999999999999999874 489999999999999995 999999999974 57877
Q ss_pred HHH
Q 048654 708 EYK 710 (723)
Q Consensus 708 ~~~ 710 (723)
++.
T Consensus 267 ~~~ 269 (286)
T PRK14275 267 QLF 269 (286)
T ss_pred HHH
Confidence 764
No 344
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.2e-37 Score=292.87 Aligned_cols=215 Identities=22% Similarity=0.307 Sum_probs=159.5
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|.+++|+++|+..+. .++++|+.||+++|+|||||||||||++|+|+..| .+|.|.+.+++......... -++
T Consensus 1 ~l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~R--PVS 74 (231)
T COG3840 1 MLALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAER--PVS 74 (231)
T ss_pred CccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccC--Chh
Confidence 3678899999987664 67899999999999999999999999999999765 55666777777654332110 011
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
...+...++..+...+|..+. ... ...-....+++++.++.++|+.. ..+|.+.+||||
T Consensus 75 mlFQEnNLFaHLtV~qNigLG-------------------l~P-~LkL~a~~r~~v~~aa~~vGl~~-~~~RLP~~LSGG 133 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLG-------------------LSP-GLKLNAEQREKVEAAAAQVGLAG-FLKRLPGELSGG 133 (231)
T ss_pred hhhhccccchhhhhhhhhccc-------------------CCc-ccccCHHHHHHHHHHHHHhChhh-HhhhCccccCch
Confidence 101111122222221211100 000 00002445678999999999975 457999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||+|||+|+++-+||||||||++|||.-+..+..++.++ +.|+|||||.++.+..++++++++++|+|. |.|
T Consensus 134 qRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~-~~g 212 (231)
T COG3840 134 QRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIA-AQG 212 (231)
T ss_pred HHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEE-eec
Confidence 999999999999999999999999999999998888877644 579999999999999999999999999996 668
Q ss_pred ChhhHHh
Q 048654 401 NFDDFES 407 (723)
Q Consensus 401 ~~~~~~~ 407 (723)
...++..
T Consensus 213 ~~~~~~~ 219 (231)
T COG3840 213 STQELLS 219 (231)
T ss_pred cHHHHhc
Confidence 7776644
No 345
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.1e-37 Score=312.27 Aligned_cols=203 Identities=27% Similarity=0.372 Sum_probs=150.6
Q ss_pred EEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhH
Q 048654 168 IDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHE 247 (723)
Q Consensus 168 l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~ 247 (723)
++||+++|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.++.+.
T Consensus 2 ~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--------------- 64 (213)
T cd03235 2 VEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--------------- 64 (213)
T ss_pred cccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH---------------
Confidence 68999999988999999999999999999999999999999999998755 4556665543321
Q ss_pred HHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHh---cCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 248 ELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQI---LGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 248 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
.++..++++.+..... ......+.+++......... ........++.++++.+|+.. ..++++.+||||
T Consensus 65 ---~~~~~i~~v~q~~~~~----~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG 136 (213)
T cd03235 65 ---KERKRIGYVPQRRSID----RDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSE-LADRQIGELSGG 136 (213)
T ss_pred ---HHHhheEEeccccccc----cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHH-HHhCCcccCCHH
Confidence 0112233332211000 00001222222211100000 011234567889999999964 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|.+
T Consensus 137 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~~ 210 (213)
T cd03235 137 QQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTVV 210 (213)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcEe
Confidence 999999999999999999999999999999999999999865 47999999999999999999999998743
No 346
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=319.40 Aligned_cols=219 Identities=25% Similarity=0.292 Sum_probs=161.2
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
+|+++||++.|+ ++++|+||||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+..+......
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~------ 72 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTGDFSKL------ 72 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECCccccH------
Confidence 378999999995 57799999999999999999999999999999999998654 556777766654321110
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
..+...++++.+.... ......+.+++.... ............++.++++.+|+.. ..++++..|||
T Consensus 73 ------~~~~~~i~~v~q~~~~-----~~~~~tv~enl~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~ 139 (274)
T PRK13644 73 ------QGIRKLVGIVFQNPET-----QFVGRTVEEDLAFGP-ENLCLPPIEIRKRVDRALAEIGLEK-YRHRSPKTLSG 139 (274)
T ss_pred ------HHHHhheEEEEEChhh-----hcccchHHHHHHhhH-HHcCCCHHHHHHHHHHHHHHCCCHH-HhcCCcccCCH
Confidence 0111222322221000 000112222222111 1111223344567889999999964 45789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||++|||++++. .||+|++|++|+++ +.|
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~-~~g 217 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIV-LEG 217 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEE-EEC
Confidence 9999999999999999999999999999999999999998754 579999999999995 69999999999996 457
Q ss_pred ChhhHH
Q 048654 401 NFDDFE 406 (723)
Q Consensus 401 ~~~~~~ 406 (723)
+.+++.
T Consensus 218 ~~~~~~ 223 (274)
T PRK13644 218 EPENVL 223 (274)
T ss_pred CHHHHh
Confidence 766653
No 347
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-36 Score=312.37 Aligned_cols=205 Identities=32% Similarity=0.424 Sum_probs=164.3
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
|.++|++++|++. .+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~ 78 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVF 78 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEe
Confidence 4689999999753 5899999999999999999999999999999999999999999988653 3588999
Q ss_pred ccccc--ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFVD--LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|.... .+++.++.. +...... .........+..+++.+|+..... +.+..|||||+|||+|||||+.+|+|||||
T Consensus 79 q~~~~~~~~t~~~nl~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~lS~G~~qrl~laral~~~p~llllD 155 (232)
T cd03300 79 QNYALFPHLTVFENIA-FGLRLKK-LPKAEIKERVAEALDLVQLEGYAN-RKPSQLSGGQQQRVAIARALVNEPKVLLLD 155 (232)
T ss_pred cccccCCCCcHHHHHH-HHHHhcC-CCHHHHHHHHHHHHHHcCCchhhc-CChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 87421 223333221 1111111 000112345678899999975544 567899999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 645 EPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||+|||+.++..+.++|.++ +.|||++|||++++..+|| ++++|++|+++. .|+.+++..
T Consensus 156 EP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d-----~i~~l~~G~~~~-~~~~~~~~~ 220 (232)
T cd03300 156 EPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSD-----RIAVMNKGKIQQ-IGTPEEIYE 220 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcC-----EEEEEECCEEEe-cCCHHHHHh
Confidence 999999999999999999876 4699999999999999995 999999999975 577766544
No 348
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=319.38 Aligned_cols=210 Identities=22% Similarity=0.352 Sum_probs=164.1
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~-------- 559 (723)
.++|+++||++.|++ ..+|+||||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 19 ~~~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 96 (276)
T PRK14271 19 APAMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDV 96 (276)
T ss_pred CcEEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchh
Confidence 568999999999975 3589999999999999999999999999999999999986 6999987652
Q ss_pred ----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|..... .++.++.. .................+..+++.+++... ...+.+.+|||||+|||+||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~eni~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LA 175 (276)
T PRK14271 97 LEFRRRVGMLFQRPNPFPMSIMDNVL-AGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLA 175 (276)
T ss_pred HHHhhheEEeccCCccCCccHHHHHH-HHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHH
Confidence 2478999874211 22322211 111111100000112345678889998642 12356789999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|+|+.+|+||||||||++||+.++..|.+.|.++ ..|||+||||++++..+|| ++++|++|+|+. .|+++++
T Consensus 176 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d-----ri~~l~~G~i~~-~g~~~~~ 249 (276)
T PRK14271 176 RTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISD-----RAALFFDGRLVE-EGPTEQL 249 (276)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHH
Confidence 9999999999999999999999999999999887 3699999999999999995 999999999975 4777766
Q ss_pred HH
Q 048654 710 KE 711 (723)
Q Consensus 710 ~~ 711 (723)
.+
T Consensus 250 ~~ 251 (276)
T PRK14271 250 FS 251 (276)
T ss_pred Hh
Confidence 43
No 349
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.7e-36 Score=317.82 Aligned_cols=225 Identities=22% Similarity=0.325 Sum_probs=162.8
Q ss_pred cceEEEeEEEEeC---------CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCC
Q 048654 164 KDITIDNFSVAAR---------GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGD 234 (723)
Q Consensus 164 ~~I~l~nls~~y~---------~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~ 234 (723)
++|+++||++.|+ ++++|+|+||+|.+|++++|+||||||||||+++|+|+..| .+|+|.+.+..+...
T Consensus 2 ~~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~sG~i~~~g~~~~~~ 79 (268)
T PRK10419 2 TLLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESP--SQGNVSWRGEPLAKL 79 (268)
T ss_pred ceEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccc
Confidence 3589999999997 47899999999999999999999999999999999998655 456676666544322
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcccc
Q 048654 235 DRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQ 314 (723)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~ 314 (723)
.... ...++..++++.+...... .....+.+.+......+..........++.++++.+|+.....
T Consensus 80 ~~~~----------~~~~~~~i~~v~q~~~~~~----~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 145 (268)
T PRK10419 80 NRAQ----------RKAFRRDIQMVFQDSISAV----NPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVL 145 (268)
T ss_pred ChhH----------HHHHHhcEEEEEcChhhcc----CCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHh
Confidence 1110 0112222333322110000 0001112222111111111222334567899999999964455
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEE
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHL 390 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L 390 (723)
++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+|||+++++..+||+|++|
T Consensus 146 ~~~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l 225 (268)
T PRK10419 146 DKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVM 225 (268)
T ss_pred hCCCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEE
Confidence 7899999999999999999999999999999999999999999998888754 579999999999999999999999
Q ss_pred eCCEEEEecCChhhH
Q 048654 391 HDQKLHFYRGNFDDF 405 (723)
Q Consensus 391 ~~G~i~~~~g~~~~~ 405 (723)
++|+++. .|+.+++
T Consensus 226 ~~G~i~~-~g~~~~~ 239 (268)
T PRK10419 226 DNGQIVE-TQPVGDK 239 (268)
T ss_pred ECCEEee-eCChhhc
Confidence 9999964 4665443
No 350
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=317.35 Aligned_cols=217 Identities=29% Similarity=0.365 Sum_probs=160.7
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|+++.|+++.+|+|+||+|++|++++|+|+|||||||||++|+|+..| ..|+|.+.+..+......
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p--~~G~i~~~g~~~~~~~~~------- 72 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSP--DSGEVRLNGRPLADWSPA------- 72 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEcccCCHH-------
Confidence 48999999999999999999999999999999999999999999999998655 456666666544221111
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
.+...++++.+.... .....+.+++...... ..........++.++++.+|+.. ..++.+.+||||
T Consensus 73 ------~~~~~i~~~~q~~~~------~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG 138 (258)
T PRK13548 73 ------ELARRRAVLPQHSSL------SFPFTVEEVVAMGRAP-HGLSRAEDDALVAAALAQVDLAH-LAGRDYPQLSGG 138 (258)
T ss_pred ------HhhhheEEEccCCcC------CCCCCHHHHHHhhhcc-cCCCcHHHHHHHHHHHHHcCCHh-HhcCCcccCCHH
Confidence 011122222221100 0011222222211100 00112234457889999999964 457899999999
Q ss_pred HHHHHHHHHHHc------cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 325 WRMRISLARALF------VQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 325 qrQRvaLArAL~------~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
|||||+|||||+ .+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+
T Consensus 139 e~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 218 (258)
T PRK13548 139 EQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGR 218 (258)
T ss_pred HHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCE
Confidence 999999999999 599999999999999999999999888754 5799999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++ +.|+++++
T Consensus 219 i~-~~~~~~~~ 228 (258)
T PRK13548 219 LV-ADGTPAEV 228 (258)
T ss_pred EE-eeCCHHHH
Confidence 96 45666554
No 351
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=315.71 Aligned_cols=205 Identities=25% Similarity=0.321 Sum_probs=162.7
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC---CCcceEEECCc-----------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS---PTEGEVRRSQK-----------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~---p~~G~I~~~~~-----------~ 560 (723)
+++++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+++. .
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 5789999999975 358999999999999999999999999999999999974 79999998763 2
Q ss_pred eEEEEccccccccCccccHHHHHH---hhCCCC-CCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHHHH
Q 048654 561 RIGRYSQHFVDLLTMEETPVSYLL---RLHPDQ-EGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 561 ~ig~~~q~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lAra 633 (723)
.++|++|.+.- +. .++...+. ...... ........+..+++.+++.. ....+++.+|||||+|||+||||
T Consensus 80 ~i~~~~q~~~l-~~--~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 156 (246)
T PRK14269 80 NVGMVFQQPNV-FV--KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARA 156 (246)
T ss_pred hEEEEecCCcc-cc--ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHH
Confidence 48999997421 11 23222221 111100 00112345678899999953 12345678999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+|| +|++|++|+++. .|+.+++.
T Consensus 157 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~ 229 (246)
T PRK14269 157 LAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVAD-----YTAFFHLGELIE-FGESKEFF 229 (246)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCc-----EEEEEECCEEEE-ECCHHHHH
Confidence 99999999999999999999999999999886 4699999999999999995 999999999985 47777654
No 352
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=321.99 Aligned_cols=224 Identities=23% Similarity=0.274 Sum_probs=160.6
Q ss_pred ceEEEeEEEEeCCe-----eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH
Q 048654 165 DITIDNFSVAARGK-----ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 165 ~I~l~nls~~y~~~-----~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
.|+++|++++|+++ ++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~- 82 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAIPANLKKI- 82 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccccccc-
Confidence 58999999999864 499999999999999999999999999999999998755 4566666655442100000
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
.....++..++++.+.... ......+.+++.... ............++.++++.+++.....++++.
T Consensus 83 -------~~~~~~~~~i~~v~q~~~~-----~~~~~tv~enl~~~~-~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~ 149 (289)
T PRK13645 83 -------KEVKRLRKEIGLVFQFPEY-----QLFQETIEKDIAFGP-VNLGENKQEAYKKVPELLKLVQLPEDYVKRSPF 149 (289)
T ss_pred -------ccHHHHhccEEEEEeCcch-----hhhhhHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCCChhHhcCChh
Confidence 0000112222222221000 000112222222111 111112233345678899999995345578999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 150 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i 229 (289)
T PRK13645 150 ELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKV 229 (289)
T ss_pred hCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999988754 57999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+.+++
T Consensus 230 ~~-~g~~~~~ 238 (289)
T PRK13645 230 IS-IGSPFEI 238 (289)
T ss_pred EE-eCCHHHH
Confidence 74 4666554
No 353
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-36 Score=317.80 Aligned_cols=210 Identities=22% Similarity=0.253 Sum_probs=164.6
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
..++|+++||+++|++ ..+|+||||+|.+||+++|+|||||||||||++|+|+++ |++|+|.+++.
T Consensus 17 ~~~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 17 EEIALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CCeEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 3568999999999975 358999999999999999999999999999999999996 58999987652
Q ss_pred ------eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ------~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|...-. .++.++.... ...............+.++++.+++.. ....+++.+|||||+|||+
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~ 173 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFA-LERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLC 173 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhH-HHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHH
Confidence 2478999864211 2332322111 111110000012345677889998842 2234677999999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||||+.+|++|||||||+|||+.+...+.++|.++. .+||+||||++++..+|| +|++|++|+++. .|+++
T Consensus 174 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~ 247 (267)
T PRK14237 174 IARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASD-----YTAFFYLGDLIE-YDKTR 247 (267)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcC-----EEEEEECCEEEE-eCCHH
Confidence 9999999999999999999999999999999998874 589999999999999995 999999999985 47777
Q ss_pred HHH
Q 048654 708 EYK 710 (723)
Q Consensus 708 ~~~ 710 (723)
++.
T Consensus 248 ~~~ 250 (267)
T PRK14237 248 NIF 250 (267)
T ss_pred HHh
Confidence 664
No 354
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.1e-36 Score=307.92 Aligned_cols=194 Identities=28% Similarity=0.375 Sum_probs=156.4
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
++++||++.|+. .+.++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~ 76 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLF 76 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEe
Confidence 468999999963 467999999999999999999999999999999999999999998763 2488999
Q ss_pred cccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|... ..+++.++.... .... ..........+.++++.+|+.... ++++.+|||||+|||+|||||+.+|+|||||
T Consensus 77 q~~~~~~~~t~~en~~~~-~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllD 153 (213)
T TIGR01277 77 QENNLFAHLTVRQNIGLG-LHPG-LKLNAEQQEKVVDAAQQVGIADYL-DRLPEQLSGGQRQRVALARCLVRPNPILLLD 153 (213)
T ss_pred ccCccCCCCcHHHHHHhH-hhcc-CCccHHHHHHHHHHHHHcCcHHHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8742 122333332111 1111 000001234577899999997544 4677999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 645 EPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
|||++||+.++..+.++|.++ +.|||+||||.+++..+|| ++++|++|+++.
T Consensus 154 EPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d-----~v~~l~~g~i~~ 209 (213)
T TIGR01277 154 EPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIAS-----QIAVVSQGKIKV 209 (213)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcC-----eEEEEECCeEEE
Confidence 999999999999999999875 3589999999999999985 999999999975
No 355
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-37 Score=356.76 Aligned_cols=212 Identities=21% Similarity=0.336 Sum_probs=168.8
Q ss_pred CCCeEEEEEEEEEcCCC--cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------
Q 048654 492 TPPLLQLIEVSFSYPNR--EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~--~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------- 559 (723)
.+++|+++|+++.|+.. ...+|+||||+|.+|+++||+||||||||||+++|+|+++|++|.|.+.+.
T Consensus 9 ~~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~ 88 (623)
T PRK10261 9 ARDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVI 88 (623)
T ss_pred CCceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccc
Confidence 35799999999999632 235899999999999999999999999999999999999999999976441
Q ss_pred ---------------eeEEEEcccc----ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC--CCCcCCCC
Q 048654 560 ---------------LRIGRYSQHF----VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS--HNHLTPIA 618 (723)
Q Consensus 560 ---------------~~ig~~~q~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~--~~~~~~i~ 618 (723)
..+||++|++ ...+++.++.... +............+++.++|+.|||.. ...++++.
T Consensus 89 ~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~ 167 (623)
T PRK10261 89 ELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAES-IRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPH 167 (623)
T ss_pred ccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCc
Confidence 2489999974 2234444443221 111111100112356788999999963 12346789
Q ss_pred CCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEE
Q 048654 619 KLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVV 694 (723)
Q Consensus 619 ~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl 694 (723)
+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+|| ||++|
T Consensus 168 ~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~ad-----ri~vl 242 (623)
T PRK10261 168 QLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIAD-----RVLVM 242 (623)
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCC-----EEEEe
Confidence 99999999999999999999999999999999999999999998875 3589999999999999995 99999
Q ss_pred ECCeEEecCCCHHHHH
Q 048654 695 ENGTVSRFPGTFEEYK 710 (723)
Q Consensus 695 ~~G~i~~~~g~~~~~~ 710 (723)
++|+|+. .|+++++.
T Consensus 243 ~~G~i~~-~g~~~~~~ 257 (623)
T PRK10261 243 YQGEAVE-TGSVEQIF 257 (623)
T ss_pred eCCeecc-cCCHHHhh
Confidence 9999974 67777663
No 356
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-36 Score=319.53 Aligned_cols=230 Identities=20% Similarity=0.271 Sum_probs=167.3
Q ss_pred CCccccCCccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeee
Q 048654 155 GQDDADANVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEV 231 (723)
Q Consensus 155 ~~~~~~~~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~ 231 (723)
|+.+.....++|+++||++.|+++++|+|+||+|.+|++++|+|+|||||||||++|+|+..+ .|..|.|.+.+..+
T Consensus 29 ~~~~~~~~~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i 108 (285)
T PRK14254 29 GDPAASSGETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNV 108 (285)
T ss_pred CCccccCCCceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEc
Confidence 443333355679999999999989999999999999999999999999999999999998653 25678887776654
Q ss_pred cCCChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc
Q 048654 232 VGDDRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK 311 (723)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~ 311 (723)
...... ...++..++++.+.... . ...+.+++..... ..... .....++.++++.+|+..
T Consensus 109 ~~~~~~-----------~~~~~~~i~~v~q~~~l------~-~~tv~enl~~~~~-~~~~~-~~~~~~~~~~l~~~~l~~ 168 (285)
T PRK14254 109 YDADVD-----------PVALRRRIGMVFQKPNP------F-PKSIYDNVAYGLK-IQGYD-GDIDERVEESLRRAALWD 168 (285)
T ss_pred cccccc-----------hHhhhccEEEEecCCcc------C-cCCHHHHHHHHHH-HcCCc-HHHHHHHHHHHHHcCCCc
Confidence 311000 00112223333221110 0 0122222221111 11111 234567889999999842
Q ss_pred ---cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCE
Q 048654 312 ---EMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTE 386 (723)
Q Consensus 312 ---~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~ 386 (723)
...++++.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+||+
T Consensus 169 ~i~~~~~~~~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dr 248 (285)
T PRK14254 169 EVKDQLDSSGLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDK 248 (285)
T ss_pred hhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCE
Confidence 2346889999999999999999999999999999999999999999999999876 46999999999999999999
Q ss_pred EE-EEeCCEEEEecCChhhH
Q 048654 387 II-HLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 387 Ii-~L~~G~i~~~~g~~~~~ 405 (723)
++ +|++|+++. .|+..++
T Consensus 249 i~v~l~~G~i~~-~g~~~~~ 267 (285)
T PRK14254 249 TAVFLTGGELVE-FDDTDKI 267 (285)
T ss_pred EEEEeeCCEEEE-eCCHHHH
Confidence 75 679999975 4665544
No 357
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2e-36 Score=311.54 Aligned_cols=214 Identities=23% Similarity=0.320 Sum_probs=157.7
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++||++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~------- 71 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDITKLPPHE------- 71 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECCCCCHHH-------
Confidence 5789999999989999999999999999999999999999999999998755 4566766665543221110
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCC-CCccccCCCCCCCChH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLG-FTKEMQGRPTKSFSGG 324 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lg-l~~~~~~~~~~~LSGG 324 (723)
.....++++.+.... .....+.+++..... .... .....+.++++.++ +. ...++++.+||||
T Consensus 72 -----~~~~~i~~~~q~~~~------~~~~tv~~~l~~~~~---~~~~-~~~~~~~~~l~~~~~l~-~~~~~~~~~LS~G 135 (230)
T TIGR03410 72 -----RARAGIAYVPQGREI------FPRLTVEENLLTGLA---ALPR-RSRKIPDEIYELFPVLK-EMLGRRGGDLSGG 135 (230)
T ss_pred -----HHHhCeEEeccCCcc------cCCCcHHHHHHHHHH---hcCc-chHHHHHHHHHHHHhHH-HHhhCChhhCCHH
Confidence 011122333221110 011122232221111 1111 12334567787776 44 3457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|.++ +.|||+|||+++++..+||+|++|++|+++. .|
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~-~~ 214 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVA-SG 214 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EC
Confidence 999999999999999999999999999999999999998764 5799999999999999999999999999964 47
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+.+++
T Consensus 215 ~~~~~ 219 (230)
T TIGR03410 215 AGDEL 219 (230)
T ss_pred CHHHc
Confidence 66554
No 358
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-36 Score=331.38 Aligned_cols=213 Identities=22% Similarity=0.300 Sum_probs=162.1
Q ss_pred EEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHHHHH
Q 048654 173 VAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEELVKL 252 (723)
Q Consensus 173 ~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l 252 (723)
+.|+++.+|+|+||+|++||+++|+|||||||||||++|+|+..| ..|+|.+.++++...+...+ ..+
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~----------~~~ 68 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVEL----------REV 68 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHH----------HHH
Confidence 357889999999999999999999999999999999999998754 56777777776654322111 011
Q ss_pred -HHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHHHHHHH
Q 048654 253 -REEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWRMRISL 331 (723)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQRvaL 331 (723)
+..++++.+.... .....+.+++..... +..+.......++.++|+.+||. ...++++.+|||||||||+|
T Consensus 69 rr~~i~~v~Q~~~l------~~~~TV~eNi~~~~~-~~~~~~~~~~~~~~~~l~~vgL~-~~~~~~p~~LSGGq~QRV~l 140 (363)
T TIGR01186 69 RRKKIGMVFQQFAL------FPHMTILQNTSLGPE-LLGWPEQERKEKALELLKLVGLE-EYEHRYPDELSGGMQQRVGL 140 (363)
T ss_pred HhCcEEEEECCCcC------CCCCCHHHHHHHHHH-HcCCCHHHHHHHHHHHHHhcCCc-hhhhCChhhCCHHHHHHHHH
Confidence 1233333322111 111233344432221 11223345567899999999996 45689999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChhhHH
Q 048654 332 ARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFDDFE 406 (723)
Q Consensus 332 ArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~~~~ 406 (723)
||||+.+|+||||||||++||+.++.++++.|.++ ++|||+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 141 ARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~-~g~~~ei~ 218 (363)
T TIGR01186 141 ARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQ-VGTPDEIL 218 (363)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEe-eCCHHHHH
Confidence 99999999999999999999999999999988654 6799999999999999999999999999974 47776653
No 359
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-36 Score=315.75 Aligned_cols=207 Identities=26% Similarity=0.374 Sum_probs=161.5
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----cceEEECCc----------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT-----EGEVRRSQK---------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~-----~G~I~~~~~---------- 559 (723)
+|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+++.
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 7899999999975 35899999999999999999999999999999999999874 899987652
Q ss_pred ---eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCc-HHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLS-KQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 ---~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|+.. ..+++.++.... .... ...... ..+.+..++..+++.. ....+++.+|||||+|||+|
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~-~~~~-~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 159 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAG-LKLA-GIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCI 159 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHH-HHhc-CCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHH
Confidence 24889998742 222333332111 1111 100000 1233556667776532 12346789999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||+|+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|++++
T Consensus 160 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~ 233 (252)
T PRK14272 160 ARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSD-----TTSFFLVGDLVE-HGPTDQ 233 (252)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHHH
Confidence 999999999999999999999999999999998875 689999999999999995 999999999974 578777
Q ss_pred HHH
Q 048654 709 YKE 711 (723)
Q Consensus 709 ~~~ 711 (723)
+..
T Consensus 234 ~~~ 236 (252)
T PRK14272 234 LFT 236 (252)
T ss_pred HHh
Confidence 643
No 360
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=319.50 Aligned_cols=209 Identities=22% Similarity=0.326 Sum_probs=162.0
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
+.++|+++|+++.|++. .+|+|+||+|.+|++++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 21 ~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 98 (271)
T PRK14238 21 KKVVFDTQNLNLWYGED--HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSY 98 (271)
T ss_pred CceEEEEeeeEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccc
Confidence 46799999999999753 58999999999999999999999999999999999997 69999987652
Q ss_pred ------eeEEEEccccccc-cCccccHHHHHHhhCCCCCCC-cHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGL-SKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 560 ------~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv 628 (723)
..++|++|...-. .++.++.. +..... ..... .....+..+++.+++.. .....++.+|||||||||
T Consensus 99 ~~~~~~~~i~~v~q~~~~~~~tv~eni~-~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 99 SVEELRTNVGMVFQKPNPFPKSIYDNVT-YGPKIH-GIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred cHHHHhhhEEEEecCCccccccHHHHHH-HHHHhc-CCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 2488999874211 12222211 111111 11000 01233566677775421 122356789999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
+|||+|+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|++|+++. .|+.
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d-----~i~~l~~G~i~~-~g~~ 250 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISD-----KTAFFLNGYVNE-YDDT 250 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCC-----EEEEEECCEEEE-eCCH
Confidence 99999999999999999999999999999999998874 689999999999999995 999999999975 4777
Q ss_pred HHHH
Q 048654 707 EEYK 710 (723)
Q Consensus 707 ~~~~ 710 (723)
+++.
T Consensus 251 ~~~~ 254 (271)
T PRK14238 251 DKIF 254 (271)
T ss_pred HHHH
Confidence 7654
No 361
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=332.88 Aligned_cols=216 Identities=24% Similarity=0.312 Sum_probs=157.2
Q ss_pred EeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHH
Q 048654 169 DNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEE 248 (723)
Q Consensus 169 ~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~ 248 (723)
.++.+.|+...+|+|+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+.++...+...+
T Consensus 32 ~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l--------- 100 (400)
T PRK10070 32 EQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAEL--------- 100 (400)
T ss_pred HHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHH---------
Confidence 3333334434489999999999999999999999999999999998765 45677777766543221111
Q ss_pred HHHH-HHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHHH
Q 048654 249 LVKL-REEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWRM 327 (723)
Q Consensus 249 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQ 327 (723)
..+ +..++++.+.... .....+.+++..... ...+......+++.++|+.+||.. ..++++.+|||||||
T Consensus 101 -~~~~~~~igyv~Q~~~l------~~~~Tv~enl~~~~~-~~~~~~~~~~~~~~e~L~~~gL~~-~~~~~~~~LSgGq~Q 171 (400)
T PRK10070 101 -REVRRKKIAMVFQSFAL------MPHMTVLDNTAFGME-LAGINAEERREKALDALRQVGLEN-YAHSYPDELSGGMRQ 171 (400)
T ss_pred -HHHHhCCEEEEECCCcC------CCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCh-hhhcCcccCCHHHHH
Confidence 011 1123333222111 111223333322211 112223344567889999999974 457999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChh
Q 048654 328 RISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFD 403 (723)
Q Consensus 328 RvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~ 403 (723)
||+|||||+.+|+||||||||++||+.++..|.++|.++ ++|||+||||++++..+||+|++|++|+++. .|+.+
T Consensus 172 Rv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~-~g~~~ 250 (400)
T PRK10070 172 RVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQ-VGTPD 250 (400)
T ss_pred HHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEe-cCCHH
Confidence 999999999999999999999999999999999988754 5799999999999999999999999999964 47665
Q ss_pred hH
Q 048654 404 DF 405 (723)
Q Consensus 404 ~~ 405 (723)
++
T Consensus 251 ~l 252 (400)
T PRK10070 251 EI 252 (400)
T ss_pred HH
Confidence 54
No 362
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=318.29 Aligned_cols=208 Identities=24% Similarity=0.293 Sum_probs=163.5
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
.+++|+++||++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+++.
T Consensus 10 ~~~~l~i~nl~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 10 KNIIISLQNVTISYGTF--EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CCceEEEEeEEEEECCE--EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 35689999999999753 58999999999999999999999999999999999987 68999987653
Q ss_pred ------eeEEEEccccccccCccccHHHHHHhhCCCCCCC--cHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGL--SKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 560 ------~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv 628 (723)
..++|++|+.. .+. .++.+.+. +.....+. ...+.+..+++.+++.. ...++++.+|||||||||
T Consensus 88 ~~~~~~~~i~~v~q~~~-l~~--~tv~enl~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl 163 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPN-PFP--KSIYENIA-FGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRL 163 (269)
T ss_pred CHHHHhhceEEEccCCc-cch--hhHHHHHh-hhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHH
Confidence 24899998742 111 12222221 11000111 12345677888888742 223467789999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEEC----------
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVEN---------- 696 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~---------- 696 (723)
+|||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| ++++|++
T Consensus 164 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d-----~i~~l~~~~~~~~~~g~ 238 (269)
T PRK14259 164 CIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSD-----MTAFFNAEEVEGGSGGK 238 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEeccccccccccc
Confidence 99999999999999999999999999999999998874 589999999999999995 9999996
Q ss_pred -CeEEecCCCHHHHHH
Q 048654 697 -GTVSRFPGTFEEYKE 711 (723)
Q Consensus 697 -G~i~~~~g~~~~~~~ 711 (723)
|+++. .|+++++.+
T Consensus 239 ~g~~~~-~~~~~~~~~ 253 (269)
T PRK14259 239 VGYLVE-FNETKKIFN 253 (269)
T ss_pred cceEEE-eCCHHHHHh
Confidence 56764 578777643
No 363
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=315.54 Aligned_cols=219 Identities=21% Similarity=0.298 Sum_probs=160.7
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|+++.|+++++|+++||+|.+|++++|+||||||||||+++|+|+..| ..|.|.+.+..+.........
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~---- 78 (255)
T PRK11300 5 LLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKP--TGGTILLRGQHIEGLPGHQIA---- 78 (255)
T ss_pred eEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CcceEEECCEECCCCCHHHHH----
Confidence 59999999999999999999999999999999999999999999999998754 456677766654322211100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHH---------HHHh---cC--chHHHHHHHHHHHhCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYE---------KLQI---LG--SDAAEAQASKILAGLGFT 310 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~---~~--~~~~~~~~~~~L~~lgl~ 310 (723)
+..+.++.+.... .....+.+++..... .+.. .. ......++.++++.+|+.
T Consensus 79 --------~~~i~~~~q~~~~------~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 144 (255)
T PRK11300 79 --------RMGVVRTFQHVRL------FREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL 144 (255)
T ss_pred --------hcCeEEeccCccc------CCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh
Confidence 0011111111000 001122222221100 0000 00 012335678899999996
Q ss_pred ccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCE
Q 048654 311 KEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTE 386 (723)
Q Consensus 311 ~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~ 386 (723)
. ..++++.+|||||||||+|||||+.+|+||||||||++||+.++..|.++|.++ +.|||+|||+++++..+||+
T Consensus 145 ~-~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~ 223 (255)
T PRK11300 145 E-HANRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDR 223 (255)
T ss_pred h-hhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCE
Confidence 4 457999999999999999999999999999999999999999999999998754 57999999999999999999
Q ss_pred EEEEeCCEEEEecCChhhH
Q 048654 387 IIHLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 387 Ii~L~~G~i~~~~g~~~~~ 405 (723)
|++|++|+++ +.|+.+++
T Consensus 224 i~~l~~g~i~-~~~~~~~~ 241 (255)
T PRK11300 224 IYVVNQGTPL-ANGTPEEI 241 (255)
T ss_pred EEEEECCeEE-ecCCHHHH
Confidence 9999999996 45666554
No 364
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=309.77 Aligned_cols=190 Identities=29% Similarity=0.387 Sum_probs=152.5
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------e
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------------L 560 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------------~ 560 (723)
+.+ ||+++|++. . + ||||+|.+ ++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 2 ~~~-~l~~~~~~~--~-~-~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--T-L-KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--e-e-CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 344 899999863 2 3 99999999 999999999999999999999999999999987652 1
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
.++|++|... ..+++.++.... ...+ . .......+.++++.+|+.... ++++.+|||||||||+|||||+.+|
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~-~~~~-~--~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p 150 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFG-LKRK-R--NREDRISVDELLDLLGLDHLL-NRYPAQLSGGEKQRVALARALAAQP 150 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHH-HhhC-C--HHHHHHHHHHHHHHcCCHhHh-hcCcccCCHHHHHHHHHHHHHhcCC
Confidence 4889998742 122333332111 1111 0 001234578899999997543 4677999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++.
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~ 212 (214)
T cd03297 151 ELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLAD-----RIVVMEDGRLQY 212 (214)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcC-----EEEEEECCEEEe
Confidence 999999999999999999999999875 4589999999999999995 999999999964
No 365
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.2e-37 Score=349.63 Aligned_cols=206 Identities=24% Similarity=0.353 Sum_probs=165.1
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------ee
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ 561 (723)
++|+++|+++.|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..
T Consensus 3 ~~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 3 ALLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred ceEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 58999999999975 35899999999999999999999999999999999999999999988752 24
Q ss_pred EEEEccccc--cccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
++|++|.+. ..+++.++... ............ ....+.++++.+||.... ++++.+|||||||||+|||||+.
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~ 158 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFL-GREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-DKLVGELSIGEQQMVEIAKVLSF 158 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhh-ccccccccCccCHHHHHHHHHHHHHHcCCCCCc-cCchhhCCHHHHHHHHHHHHHhc
Confidence 899999742 22233332211 000000000011 134577899999997654 46789999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++. .|+++++
T Consensus 159 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~ 228 (501)
T PRK10762 159 ESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICD-----DVTVFRDGQFIA-EREVADL 228 (501)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEeCCEEEE-ecCcCcC
Confidence 99999999999999999999999988876 3589999999999999995 999999999974 4666554
No 366
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.1e-36 Score=315.28 Aligned_cols=217 Identities=30% Similarity=0.380 Sum_probs=162.1
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++++|+|+||+|.+|++++|+|+|||||||||++|+|+..| ..|+|.+.+..+.......
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~------- 72 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLHGLSRRA------- 72 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcccCCHHH-------
Confidence 6899999999999999999999999999999999999999999999998755 4566766665543221111
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH---HhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL---QILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
++..++++.+.... .....+.+++....... ..........++.++++.+|+. ...++++.+||
T Consensus 73 ------~~~~i~~~~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS 139 (256)
T TIGR03873 73 ------RARRVALVEQDSDT------AVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELS-HLADRDMSTLS 139 (256)
T ss_pred ------HhhheEEecccCcc------CCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcH-hhhcCCcccCC
Confidence 11122333221100 00112222222111000 0011223345788999999996 45579999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
|||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++ ..
T Consensus 140 ~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~ 218 (256)
T TIGR03873 140 GGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVV-AA 218 (256)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEE-Ee
Confidence 99999999999999999999999999999999999999999865 579999999999999999999999999997 45
Q ss_pred CChhhH
Q 048654 400 GNFDDF 405 (723)
Q Consensus 400 g~~~~~ 405 (723)
|+.+++
T Consensus 219 g~~~~~ 224 (256)
T TIGR03873 219 GPPREV 224 (256)
T ss_pred cCHHHh
Confidence 766554
No 367
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=320.65 Aligned_cols=218 Identities=25% Similarity=0.324 Sum_probs=161.3
Q ss_pred EEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhh
Q 048654 167 TIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAH 246 (723)
Q Consensus 167 ~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~ 246 (723)
.++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+...+...+
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~------- 96 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKEL------- 96 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhh-------
Confidence 567999999999999999999999999999999999999999999998654 45677776665432211100
Q ss_pred HHHHHH-HHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 247 EELVKL-REEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 247 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
..+ ...++++.+.... .....+.+++.... ............++.++++.+|+.. ..++++.+|||||
T Consensus 97 ---~~~~~~~i~~v~q~~~~------~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~Gq 165 (269)
T cd03294 97 ---RELRRKKISMVFQSFAL------LPHRTVLENVAFGL-EVQGVPRAEREERAAEALELVGLEG-WEHKYPDELSGGM 165 (269)
T ss_pred ---hhhhcCcEEEEecCccc------CCCCcHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCHh-HhhCCcccCCHHH
Confidence 000 1122222221110 01112233322211 1111222334567889999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
||||+|||||+.+|+||||||||++||+.++.+|.++|.++ +.|||+||||++++..+||+|++|++|+++. .|+
T Consensus 166 ~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~ 244 (269)
T cd03294 166 QQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQ-VGT 244 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCC
Confidence 99999999999999999999999999999999999988764 5799999999999999999999999999974 466
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+++
T Consensus 245 ~~~~ 248 (269)
T cd03294 245 PEEI 248 (269)
T ss_pred HHHH
Confidence 6554
No 368
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-36 Score=349.22 Aligned_cols=207 Identities=27% Similarity=0.379 Sum_probs=166.8
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------e
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------L 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~ 560 (723)
.++|+++|++++|++. .+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 3 ~~~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 80 (510)
T PRK09700 3 TPYISMAGIGKSFGPV--HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQL 80 (510)
T ss_pred CceEEEeeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHC
Confidence 4689999999999753 5899999999999999999999999999999999999999999988652 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCCCCCC------cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHH
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGL------SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAr 632 (723)
.++|++|+.. ..+++.++.... ........+. .....+.++|+.+||.... ++++.+|||||||||+|||
T Consensus 81 ~i~~v~q~~~~~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qrv~ia~ 158 (510)
T PRK09700 81 GIGIIYQELSVIDELTVLENLYIG-RHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDL-DEKVANLSISHKQMLEIAK 158 (510)
T ss_pred CeEEEeecccccCCCcHHHHhhhc-cccccccccccccCHHHHHHHHHHHHHHcCCCCCc-ccchhhCCHHHHHHHHHHH
Confidence 4899999742 222332221100 0000000010 1234577899999997544 5778999999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++ +.|+++++
T Consensus 159 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d-----~v~~l~~G~i~-~~g~~~~~ 232 (510)
T PRK09700 159 TLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICD-----RYTVMKDGSSV-CSGMVSDV 232 (510)
T ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEe-eecchhhC
Confidence 999999999999999999999999999999876 3689999999999999995 99999999996 56777765
No 369
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-36 Score=319.57 Aligned_cols=223 Identities=22% Similarity=0.291 Sum_probs=164.2
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCC--CC-CCcEEEEEeeeeecCCChHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKI--PV-PKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~--~~-~~~~~i~~~~q~~~~~~~~~~ 239 (723)
...|+++|++++|+++.+|+|+||+|.+|++++|+|+|||||||||++|+|+.. |. |..|.|.+.++.+......
T Consensus 37 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~-- 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD-- 114 (286)
T ss_pred ceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc--
Confidence 346999999999998899999999999999999999999999999999999743 21 3678887776654321100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCC---ccccC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFT---KEMQG 315 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~---~~~~~ 315 (723)
...++..++++.+.... . ...+.+++.... ...... ......++.++++.+|+. ....+
T Consensus 115 ---------~~~~~~~i~~v~q~~~l------~-~~tv~enl~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~ 177 (286)
T PRK14275 115 ---------EVLLRKKIGMVFQKPNP------F-PKSIFDNIAYGP-RLHGINDKKQLEEIVEKSLRKAALWDEVSDRLD 177 (286)
T ss_pred ---------hHHhhhcEEEECCCCCC------C-ccCHHHHHHhHH-HhcCCCcHHHHHHHHHHHHHHhCCccchhhHhh
Confidence 00122233333222111 0 112233332111 111111 123345677888988873 12346
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 178 ~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G 257 (286)
T PRK14275 178 KNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEG 257 (286)
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999999876 469999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++. .|+..++
T Consensus 258 ~i~~-~g~~~~~ 268 (286)
T PRK14275 258 VLVE-HAPTAQL 268 (286)
T ss_pred EEEE-eCCHHHH
Confidence 9974 4666554
No 370
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-36 Score=320.51 Aligned_cols=219 Identities=24% Similarity=0.337 Sum_probs=161.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
..|+++||+++|+++.+|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|.|.+.+..+.......
T Consensus 6 ~~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~----- 78 (265)
T PRK10253 6 ARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHIQHYASKE----- 78 (265)
T ss_pred cEEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEhhhCCHHH-----
Confidence 359999999999999999999999999999999999999999999999998654 4566776665543211111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHH-HHHHHhc--CchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAEL-YEKLQIL--GSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~--~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
+...++++.+.... .....+.+.+... ....... .......++.++++.+|+.. ..++++.+
T Consensus 79 --------~~~~i~~v~q~~~~------~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~ 143 (265)
T PRK10253 79 --------VARRIGLLAQNATT------PGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITH-LADQSVDT 143 (265)
T ss_pred --------HhhheEEeeccCcC------CCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHH-HhcCCccc
Confidence 11122332221110 0011111221110 0000000 11233457889999999964 45799999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
||||||||++|||||+.+|++|||||||++||+.++.++.++|.++ +.|||+||||++++..+||+|++|++|+++
T Consensus 144 LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~ 223 (265)
T PRK10253 144 LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIV 223 (265)
T ss_pred CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999988764 579999999999999999999999999986
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
. .|+.+++
T Consensus 224 ~-~g~~~~~ 231 (265)
T PRK10253 224 A-QGAPKEI 231 (265)
T ss_pred E-eCCHHHH
Confidence 4 4665554
No 371
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.4e-36 Score=331.92 Aligned_cols=197 Identities=27% Similarity=0.360 Sum_probs=159.1
Q ss_pred EEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------------eeEEE
Q 048654 500 EVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------------LRIGR 564 (723)
Q Consensus 500 ~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------------~~ig~ 564 (723)
||+++|++. .+ ++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999753 35 999999999999999999999999999999999999999987652 24789
Q ss_pred Eccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 565 YSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 565 ~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
++|+.. ..+++.++.. +...... .......+.++++.+||.... ++++.+|||||||||+|||||+.+|+|||
T Consensus 80 v~q~~~l~~~~tv~enl~-~~~~~~~---~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGqkqRvalAraL~~~p~lll 154 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLR-YGMKRAR---PSERRISFERVIELLGIGHLL-GRLPGRLSGGEKQRVAIGRALLSSPRLLL 154 (354)
T ss_pred EecCCccCCCCcHHHHHH-HHhhccC---hhHHHHHHHHHHHHcCChhHh-cCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 998742 2234443321 1111110 111234578899999997544 46779999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 643 LDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++. .|+++++..
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~~ 221 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLAD-----RVVVLEDGRVAA-AGPIAEVWA 221 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEEeCCEEEE-ECCHHHHhc
Confidence 99999999999999999999875 3589999999999999995 999999999974 578776643
No 372
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-36 Score=314.64 Aligned_cols=207 Identities=25% Similarity=0.326 Sum_probs=161.5
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc----------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK---------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~---------- 559 (723)
+|+++||++.|++. .+|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14240 3 KISVKDLDLFYGDF--QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVN 80 (250)
T ss_pred eEEEEEEEEEECCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchH
Confidence 58899999999753 589999999999999999999999999999999999763 6999987652
Q ss_pred ---eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 560 ---~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lAr 632 (723)
..++|++|...- ..++.++.... .............+.+.++++.+++.. ...++++.+|||||+|||+|||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~ni~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 159 (250)
T PRK14240 81 QLRKRVGMVFQQPNPFPMSIYDNVAYG-PRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIAR 159 (250)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHH
Confidence 247899987421 12232222111 111110000012345677888888742 1234677999999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||+.+|++|||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|++|+++. .|+.+++.
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d-----~v~~l~~G~i~~-~~~~~~~~ 233 (250)
T PRK14240 160 ALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISD-----KTAFFLNGEIVE-FGDTVDLF 233 (250)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCC-----EEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999998874 589999999999999995 999999999975 47776654
No 373
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-36 Score=319.83 Aligned_cols=208 Identities=24% Similarity=0.353 Sum_probs=164.2
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
++++|+++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+++.
T Consensus 36 ~~~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~ 113 (285)
T PRK14254 36 GETVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADV 113 (285)
T ss_pred CCceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 5679999999999975 358999999999999999999999999999999999987 68999987652
Q ss_pred ------eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ------~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|+.... .++.++.. +...... . .......+..+++.+++.. ....+++.+|||||||||+
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~tv~enl~-~~~~~~~-~-~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 114 DPVALRRRIGMVFQKPNPFPKSIYDNVA-YGLKIQG-Y-DGDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred chHhhhccEEEEecCCccCcCCHHHHHH-HHHHHcC-C-cHHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHH
Confidence 2478999874211 12222221 1111111 1 0112356788899999852 1234567899999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEE-EEECCeEEecCCCH
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIW-VVENGTVSRFPGTF 706 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~-vl~~G~i~~~~g~~ 706 (723)
|||||+.+|+||||||||+|||+.++..|.++|+++. .|||+||||++++..+|| |++ +|++|+|+. .|++
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~d-----ri~v~l~~G~i~~-~g~~ 264 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISD-----KTAVFLTGGELVE-FDDT 264 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcC-----EEEEEeeCCEEEE-eCCH
Confidence 9999999999999999999999999999999999883 689999999999999995 865 679999975 4777
Q ss_pred HHHH
Q 048654 707 EEYK 710 (723)
Q Consensus 707 ~~~~ 710 (723)
+++.
T Consensus 265 ~~~~ 268 (285)
T PRK14254 265 DKIF 268 (285)
T ss_pred HHHH
Confidence 6654
No 374
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.2e-36 Score=312.71 Aligned_cols=202 Identities=27% Similarity=0.423 Sum_probs=156.7
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 4689999999743346899999999999999999999999999999999999999999998763 24899
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHHHH---------HHHHHHhC--CCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEA---------VRAKLGKF--GLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~L~~~--gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
++|+.. .+ ..++...+ ..... ... ... +..++..+ ++.... .+++.+|||||||||+||||
T Consensus 81 ~~q~~~-~~--~~tv~~nl-~~~~~--~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~-~~~~~~LSgG~~qrv~lara 152 (237)
T cd03252 81 VLQENV-LF--NRSIRDNI-ALADP--GMS-MERVIEAAKLAGAHDFISELPEGYDTIV-GEQGAGLSGGQRQRIAIARA 152 (237)
T ss_pred EcCCch-hc--cchHHHHh-hccCC--CCC-HHHHHHHHHHcCcHHHHHhCcccccchh-hcCCCcCCHHHHHHHHHHHH
Confidence 999742 11 12322222 11111 111 111 12344444 444332 35678999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+.+|++|||||||+|||+.++..+.+.|.++. .|||++|||++++. .| |+|++|++|+++. .|+++++..
T Consensus 153 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~-----d~v~~l~~G~i~~-~~~~~~~~~ 225 (237)
T cd03252 153 LIHNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NA-----DRIIVMEKGRIVE-QGSHDELLA 225 (237)
T ss_pred HhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hC-----CEEEEEECCEEEE-EcCHHHHHh
Confidence 999999999999999999999999999998874 58999999999995 58 4999999999974 578777654
Q ss_pred H
Q 048654 712 D 712 (723)
Q Consensus 712 ~ 712 (723)
.
T Consensus 226 ~ 226 (237)
T cd03252 226 E 226 (237)
T ss_pred c
Confidence 3
No 375
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-36 Score=313.76 Aligned_cols=209 Identities=24% Similarity=0.322 Sum_probs=162.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----cceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT-----EGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~-----~G~I~~~~~-------- 559 (723)
.++|+++||++.|+++ .+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+++.
T Consensus 2 ~~~l~~~~l~~~~~~~--~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 79 (251)
T PRK14249 2 DPKIKIRGVNFFYHKH--QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLD 79 (251)
T ss_pred CceEEEEEEEEEECCe--eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccC
Confidence 3579999999999753 5899999999999999999999999999999999999997 699987542
Q ss_pred -----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|..... .++.++.. +................+..++..+++.. ....+++.+|||||||||+|
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~tv~enl~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~l 158 (251)
T PRK14249 80 VVNLRKRVGMVFQQPNPFPKSIFDNVA-FGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCI 158 (251)
T ss_pred hHHhhceEEEEecCCccCcCcHHHHHh-hHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 2488999974311 12222211 11111110000011234566778888742 12346678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||||+.+|++|||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|++|+++. .|++++
T Consensus 159 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~ 232 (251)
T PRK14249 159 ARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASD-----WTGFLLTGDLVE-YGRTGE 232 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCC-----EEEEEeCCeEEE-eCCHHH
Confidence 999999999999999999999999999999998873 699999999999999995 999999999975 477776
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 233 ~~ 234 (251)
T PRK14249 233 IF 234 (251)
T ss_pred HH
Confidence 64
No 376
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.7e-36 Score=348.70 Aligned_cols=211 Identities=24% Similarity=0.395 Sum_probs=166.1
Q ss_pred CCeEEEEEEEEEcCCC--cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc------
Q 048654 493 PPLLQLIEVSFSYPNR--EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK------ 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~--~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~------ 559 (723)
.++|+++|+++.|++. ...+|++|||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 3 QPLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred CceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 4589999999999631 23589999999999999999999999999999999999987 7999987652
Q ss_pred ---------eeEEEEcccccc----ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC--CCcCCCCCCCHHH
Q 048654 560 ---------LRIGRYSQHFVD----LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH--NHLTPIAKLSGGQ 624 (723)
Q Consensus 560 ---------~~ig~~~q~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~--~~~~~i~~LSGGq 624 (723)
..+||++|+... ..++.++... ...............++.++|+.+||.+. ..++++.+|||||
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe 161 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYE-VLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGE 161 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHH
Confidence 248999997421 1222222111 11111111111123567889999999742 2246789999999
Q ss_pred HHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEE
Q 048654 625 KARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVS 700 (723)
Q Consensus 625 kqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~ 700 (723)
||||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++..+|| ||++|++|+++
T Consensus 162 ~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~d-----ri~~l~~G~i~ 236 (529)
T PRK15134 162 RQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLAD-----RVAVMQNGRCV 236 (529)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcC-----EEEEEECCEEE
Confidence 99999999999999999999999999999999999999875 4689999999999999995 99999999997
Q ss_pred ecCCCHHHHH
Q 048654 701 RFPGTFEEYK 710 (723)
Q Consensus 701 ~~~g~~~~~~ 710 (723)
. .|+++++.
T Consensus 237 ~-~g~~~~~~ 245 (529)
T PRK15134 237 E-QNRAATLF 245 (529)
T ss_pred E-eCCHHHHh
Confidence 4 57776653
No 377
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-36 Score=314.30 Aligned_cols=221 Identities=23% Similarity=0.289 Sum_probs=160.2
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~ 240 (723)
.+|+++||++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+.| .+|+|.+.+..+......
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~--- 80 (252)
T PRK14255 4 KIITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNED--- 80 (252)
T ss_pred ceEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEccccccc---
Confidence 36899999999998899999999999999999999999999999999999754223 367887776654321100
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHhCCCCc---cccCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGS-DAAEAQASKILAGLGFTK---EMQGR 316 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~L~~lgl~~---~~~~~ 316 (723)
...++..++++.+.... . ...+.+++..... ...... .....++.++++.+++.. ...++
T Consensus 81 --------~~~~~~~i~~~~q~~~~------~-~~tv~~nl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~ 144 (252)
T PRK14255 81 --------VVQLRKQVGMVFQQPNP------F-PFSIYENVIYGLR-LAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHE 144 (252)
T ss_pred --------HHHhcCeEEEEECCCcc------C-CCcHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHHcCCccchhhHHhc
Confidence 00111222333221110 0 0122222221111 111111 222345677888887631 23468
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|+
T Consensus 145 ~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T PRK14255 145 SALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGN 224 (252)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999876 4799999999999999999999999999
Q ss_pred EEEecCChhh
Q 048654 395 LHFYRGNFDD 404 (723)
Q Consensus 395 i~~~~g~~~~ 404 (723)
++.+ |+..+
T Consensus 225 i~~~-~~~~~ 233 (252)
T PRK14255 225 LIEF-ADTKQ 233 (252)
T ss_pred EEEe-CCHHH
Confidence 9764 54433
No 378
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3.5e-36 Score=298.39 Aligned_cols=173 Identities=38% Similarity=0.569 Sum_probs=142.8
Q ss_pred EEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhh
Q 048654 167 TIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAH 246 (723)
Q Consensus 167 ~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~ 246 (723)
+++|+++.|+++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.......
T Consensus 1 ~~~~l~~~~~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~--~~G~v~~~g~~~~~~~~~~-------- 70 (180)
T cd03214 1 EVENLSVGYGGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKP--SSGEILLDGKDLASLSPKE-------- 70 (180)
T ss_pred CeeEEEEEECCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCcCCHHH--------
Confidence 468999999988999999999999999999999999999999999998654 5567776665543221110
Q ss_pred HHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHH
Q 048654 247 EELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWR 326 (723)
Q Consensus 247 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqr 326 (723)
++..+++ + ..+++.+|+.. ..++.+.+|||||+
T Consensus 71 -----~~~~i~~-------------------------~----------------~q~l~~~gl~~-~~~~~~~~LS~G~~ 103 (180)
T cd03214 71 -----LARKIAY-------------------------V----------------PQALELLGLAH-LADRPFNELSGGER 103 (180)
T ss_pred -----HHHHHhH-------------------------H----------------HHHHHHcCCHh-HhcCCcccCCHHHH
Confidence 0011110 0 00677888864 34688999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 327 MRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 327 QRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
||++|||||+.+|++|||||||++||+.++.++.++|.++ +.|||+|||+++++..+||++++|++|+++
T Consensus 104 qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~ 177 (180)
T cd03214 104 QRVLLARALAQEPPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIV 177 (180)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999998765 569999999999999999999999999986
No 379
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.2e-37 Score=288.03 Aligned_cols=198 Identities=34% Similarity=0.473 Sum_probs=160.9
Q ss_pred CeEEEEEEEEEcCCC--cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------
Q 048654 494 PLLQLIEVSFSYPNR--EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------ 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~--~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------ 559 (723)
.+|+++++++..+.. ...+|++|+|.|.+||.++||||+||||||||-+++|+..|++|+|++.+.
T Consensus 5 ~ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~ 84 (228)
T COG4181 5 NIIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAA 84 (228)
T ss_pred ceeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHH
Confidence 378899998887643 346899999999999999999999999999999999999999999987653
Q ss_pred ---eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 560 ---~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral 634 (723)
..+|++||.|. +.++..+|+... +..... ........++.+|+.+||...+.+.| .+|||||||||+||||+
T Consensus 85 ~R~~~vGfVFQSF~Lip~ltAlENV~lP-leL~ge-~~~~~~~~A~~lL~~vGLg~Rl~HyP-~qLSGGEQQRVAiARAf 161 (228)
T COG4181 85 LRARHVGFVFQSFHLIPNLTALENVALP-LELRGE-SSADSRAGAKALLEAVGLGKRLTHYP-AQLSGGEQQRVALARAF 161 (228)
T ss_pred hhccceeEEEEeeeccccchhhhhccch-hhhcCC-ccccHHHHHHHHHHHhCcccccccCc-cccCchHHHHHHHHHHh
Confidence 35899999763 344444442211 111111 01124456889999999988776554 89999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEE
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVS 700 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~ 700 (723)
+..|+||+.||||.+||..+-+.+.++|-.+ +.|+|+||||..++.+ | +|++.|.+|+|+
T Consensus 162 a~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c-----~R~~r~~~G~l~ 225 (228)
T COG4181 162 AGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-C-----DRQLRLRSGRLV 225 (228)
T ss_pred cCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-h-----hheeeeecceec
Confidence 9999999999999999999999999988665 3589999999999976 4 499999999996
No 380
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=294.38 Aligned_cols=208 Identities=25% Similarity=0.379 Sum_probs=169.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
.+.|+++|+.++||.. .+|++|||+...|++|.|||.+||||||+|+||.=+.+|+.|.|..++.
T Consensus 4 ~~~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~ 81 (256)
T COG4598 4 ENALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLK 81 (256)
T ss_pred ccceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCee
Confidence 3568899999999864 4899999999999999999999999999999999999999999987652
Q ss_pred -----------eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHH
Q 048654 560 -----------LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKA 626 (723)
Q Consensus 560 -----------~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkq 626 (723)
.++++++|+|. ..+++-+|+++........ ......++++.+|.++||.+... ..+..|||||||
T Consensus 82 ~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~-~k~ea~e~Ae~~L~kVGi~ek~~-~YP~~LSGGQQQ 159 (256)
T COG4598 82 PADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGV-SKAEAIERAEKYLAKVGIAEKAD-AYPAHLSGGQQQ 159 (256)
T ss_pred eCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcC-CHHHHHHHHHHHHHHhCchhhhh-cCccccCchHHH
Confidence 14677888763 3344445544332111110 01113456788999999987665 445799999999
Q ss_pred HHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecC
Q 048654 627 RVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFP 703 (723)
Q Consensus 627 Rv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~ 703 (723)
|++|||||+.+|.++|+||||++|||+-.-.++..++++ +.|+++|||.+.|+.+++ ++|+++++|.|. ..
T Consensus 160 R~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vs-----s~v~fLh~G~iE-E~ 233 (256)
T COG4598 160 RVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVS-----SHVIFLHQGKIE-EE 233 (256)
T ss_pred HHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhh-----hheEEeecceec-cc
Confidence 999999999999999999999999999998888888776 479999999999999998 589999999995 57
Q ss_pred CCHHHHH
Q 048654 704 GTFEEYK 710 (723)
Q Consensus 704 g~~~~~~ 710 (723)
|+|+++.
T Consensus 234 G~P~qvf 240 (256)
T COG4598 234 GPPEQVF 240 (256)
T ss_pred CChHHHh
Confidence 9998864
No 381
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-37 Score=313.94 Aligned_cols=204 Identities=27% Similarity=0.380 Sum_probs=164.7
Q ss_pred eEEEEEEEEEcCCCc----------------------ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcc
Q 048654 495 LLQLIEVSFSYPNRE----------------------DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEG 552 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~----------------------~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G 552 (723)
.|+++||++-|+.+. ..-++|+||+|+.|||+.|+|-+|||||||+++|.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 467788888776421 1247899999999999999999999999999999999999999
Q ss_pred eEEECCc---------------eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCc---HHHHHHHHHHhCCCCCCC
Q 048654 553 EVRRSQK---------------LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLS---KQEAVRAKLGKFGLPSHN 612 (723)
Q Consensus 553 ~I~~~~~---------------~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~gl~~~~ 612 (723)
+|.++++ .+++++||+|. ++.++.+|. .| .....|.. ..+.+.++|+.+||....
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv-~f----GLev~Gv~~~er~~~a~~~l~~VgL~~~~ 158 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENV-AF----GLEVQGVPKAEREERALEALELVGLEGYA 158 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhh-hc----ceeecCCCHHHHHHHHHHHHHHcCchhhh
Confidence 9998774 25788999863 333333332 11 11122222 345688999999998876
Q ss_pred CcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHH----cCceEEEEecCHHHHHHhcCcCCC
Q 048654 613 HLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDE----FTGGVVLVSHDSRLISRVCDDEER 688 (723)
Q Consensus 613 ~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~----~~~tVIivSHD~~~~~~~~d~~~~ 688 (723)
+ +.+.+|||||||||.|||||+.+|+|||+|||+++|||--+..+.+.|.+ +++|||+||||++++.++.
T Consensus 159 ~-~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG----- 232 (386)
T COG4175 159 D-KYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG----- 232 (386)
T ss_pred h-cCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc-----
Confidence 5 45699999999999999999999999999999999999877776666654 4689999999999999998
Q ss_pred cEEEEEECCeEEecCCCHHHHH
Q 048654 689 SEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 689 drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|||.+|++|+|+. -|+|+++.
T Consensus 233 ~rIaimkdG~ivQ-~Gtp~eIl 253 (386)
T COG4175 233 DRIAIMKDGEIVQ-VGTPEEIL 253 (386)
T ss_pred ceEEEecCCeEEE-eCCHHHHH
Confidence 4999999999985 58998864
No 382
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.6e-36 Score=313.75 Aligned_cols=189 Identities=29% Similarity=0.395 Sum_probs=148.6
Q ss_pred EEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce----------eEEEEccc---c
Q 048654 503 FSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL----------RIGRYSQH---F 569 (723)
Q Consensus 503 ~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~----------~ig~~~q~---~ 569 (723)
..|+. ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.. .++|++|. +
T Consensus 29 ~~~~~--~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 106 (236)
T cd03267 29 RKYRE--VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQL 106 (236)
T ss_pred cccCC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCcccc
Confidence 34543 358999999999999999999999999999999999999999999886632 47888642 1
Q ss_pred ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCC
Q 048654 570 VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNH 649 (723)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~ 649 (723)
...+++.++.. .....+. .........+..+++.+|+.... ++++.+|||||||||+||+||+.+|+||||||||+|
T Consensus 107 ~~~~tv~e~l~-~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~ 183 (236)
T cd03267 107 WWDLPVIDSFY-LLAAIYD-LPPARFKKRLDELSELLDLEELL-DTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIG 183 (236)
T ss_pred CCCCcHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCChhHh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 22233333321 1111111 10001223467789999997544 467799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 650 LDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 650 LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
||+.++..+.++|.++ +.|||+||||++++..+|| ++++|.+|+++.
T Consensus 184 LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d-----~i~~l~~G~i~~ 234 (236)
T cd03267 184 LDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALAR-----RVLVIDKGRLLY 234 (236)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCC-----EEEEEeCCEEEe
Confidence 9999999999999887 3599999999999999995 999999999963
No 383
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-36 Score=315.90 Aligned_cols=224 Identities=25% Similarity=0.323 Sum_probs=165.2
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~ 238 (723)
...+|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+ .|..|+|.+.+.++......
T Consensus 22 ~~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~- 100 (272)
T PRK14236 22 EQTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD- 100 (272)
T ss_pred CCcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC-
Confidence 34579999999999988999999999999999999999999999999999998653 14678887776655321100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---ccc
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQ 314 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~ 314 (723)
...++..++++.+.... . ...+.+++.... ...... ......++.++++.+++.. ...
T Consensus 101 ----------~~~~~~~i~~v~q~~~l------~-~~tv~enl~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 162 (272)
T PRK14236 101 ----------VAELRRRVGMVFQRPNP------F-PKSIYENVVYGL-RLQGINNRRVLDEAVERSLRGAALWDEVKDRL 162 (272)
T ss_pred ----------HHHHhccEEEEecCCcc------C-cccHHHHHHHHH-HhcCCCcHHHHHHHHHHHHHHcCCChhHHHHh
Confidence 00112223333221110 0 012222222111 111111 1223456788899998853 234
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
++.+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++
T Consensus 163 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 242 (272)
T PRK14236 163 HENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYM 242 (272)
T ss_pred hCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 6889999999999999999999999999999999999999999999999866 47999999999999999999999999
Q ss_pred CEEEEecCChhhH
Q 048654 393 QKLHFYRGNFDDF 405 (723)
Q Consensus 393 G~i~~~~g~~~~~ 405 (723)
|+++. .|+.+++
T Consensus 243 G~i~~-~g~~~~~ 254 (272)
T PRK14236 243 GKLVE-YGDTDTL 254 (272)
T ss_pred CEEEe-cCCHHHH
Confidence 99964 4666654
No 384
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=316.26 Aligned_cols=209 Identities=25% Similarity=0.385 Sum_probs=164.6
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECC--------------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQ-------------- 558 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~-------------- 558 (723)
.|+|.++|++++|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+
T Consensus 8 ~~~i~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 8 EDVFNISRLYLYINDK--AILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hhheeeeeEEEecCCc--eeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 5789999999999863 589999999999999999999999999999999999999997765443
Q ss_pred ---ceeEEEEccccc--cccCccccHHHHHHhhCCCCCCC-cHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 559 ---KLRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGL-SKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 559 ---~~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
+..++|++|... ..+++.++.... .... ..... .....+..+++.+++.. ......+..||||||||++
T Consensus 86 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~ 163 (257)
T PRK14246 86 IKLRKEVGMVFQQPNPFPHLSIYDNIAYP-LKSH-GIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLT 163 (257)
T ss_pred HHHhcceEEEccCCccCCCCcHHHHHHHH-HHhc-CCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHH
Confidence 124789988642 222333332211 1111 11000 11245678889999853 1223567899999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||||+.+|++|||||||+|||+.+...+.+.|.++. .|||+||||++++..+|| ++++|++|+++. .|+.+
T Consensus 164 laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d-----~v~~l~~g~i~~-~g~~~ 237 (257)
T PRK14246 164 IARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVAD-----YVAFLYNGELVE-WGSSN 237 (257)
T ss_pred HHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCC-----EEEEEECCEEEE-ECCHH
Confidence 9999999999999999999999999999999998874 699999999999999995 999999999985 47777
Q ss_pred HHHH
Q 048654 708 EYKE 711 (723)
Q Consensus 708 ~~~~ 711 (723)
++..
T Consensus 238 ~~~~ 241 (257)
T PRK14246 238 EIFT 241 (257)
T ss_pred HHHh
Confidence 6654
No 385
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-36 Score=313.23 Aligned_cols=209 Identities=26% Similarity=0.359 Sum_probs=161.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS--P---TEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~--p---~~G~I~~~~~-------- 559 (723)
+++|+++||++.|++ ..+|+++||+|.+|++++|+|+||||||||+++|+|+++ | ++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 80 (252)
T PRK14255 3 KKIITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNED 80 (252)
T ss_pred cceEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEccccccc
Confidence 568999999999975 358999999999999999999999999999999999975 4 5899987653
Q ss_pred -----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|+.... .++.++.... .............+.+..+++.+++.. ....+++.+|||||||||+|
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~l 159 (252)
T PRK14255 81 VVQLRKQVGMVFQQPNPFPFSIYENVIYG-LRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCI 159 (252)
T ss_pred HHHhcCeEEEEECCCccCCCcHHHHHHHH-HHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHH
Confidence 2488999874211 2332322111 111110000001234566778887642 12245678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||+|+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| +|++|++|+++.+ |++.+
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d-----~i~~l~~G~i~~~-~~~~~ 233 (252)
T PRK14255 160 ARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISD-----KTAFFLTGNLIEF-ADTKQ 233 (252)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCC-----EEEEEECCEEEEe-CCHHH
Confidence 999999999999999999999999999999998874 689999999999999995 9999999999854 66655
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
..
T Consensus 234 ~~ 235 (252)
T PRK14255 234 MF 235 (252)
T ss_pred Hh
Confidence 43
No 386
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=311.83 Aligned_cols=222 Identities=23% Similarity=0.308 Sum_probs=168.2
Q ss_pred ceEEEeEEEEeCCe------------------------eeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCC
Q 048654 165 DITIDNFSVAARGK------------------------ELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPK 220 (723)
Q Consensus 165 ~I~l~nls~~y~~~------------------------~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~ 220 (723)
.|+++|+++-||.+ .-++|+||+|+.||++.|+|-||||||||+|+|+++..| .
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiep--t 81 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEP--T 81 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCC--C
Confidence 47788888877542 247999999999999999999999999999999988765 5
Q ss_pred cEEEEEeeeeecCCChHHHHHHHHhhHHHHHHHHHHHhh-hcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHH
Q 048654 221 NIDVLLVEQEVVGDDRSAIQAVVSAHEELVKLREEVASL-QNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQ 299 (723)
Q Consensus 221 ~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 299 (723)
.|+|.+.+.++...+...+..+- +..++++ |+..+. +...+.++..+.+ .+..++..+.+++
T Consensus 82 ~G~ilv~g~di~~~~~~~Lr~~R---------r~~~sMVFQ~FaLl-------PhrtVl~Nv~fGL-ev~Gv~~~er~~~ 144 (386)
T COG4175 82 RGEILVDGKDIAKLSAAELRELR---------RKKISMVFQSFALL-------PHRTVLENVAFGL-EVQGVPKAEREER 144 (386)
T ss_pred CceEEECCcchhcCCHHHHHHHH---------hhhhhhhhhhhccc-------cchhHhhhhhcce-eecCCCHHHHHHH
Confidence 66777777776655544332221 1223332 222111 1112223322221 1234556778899
Q ss_pred HHHHHHhCCCCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCcEEEEEeC
Q 048654 300 ASKILAGLGFTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLC----RWKKTLVVVSH 375 (723)
Q Consensus 300 ~~~~L~~lgl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~----~~~~TVIivsH 375 (723)
+.++|+.+||. .+.++++.+|||||||||.|||||+.+|+|||+|||||+|||--+..+++.|. ++++|||||||
T Consensus 145 a~~~l~~VgL~-~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitH 223 (386)
T COG4175 145 ALEALELVGLE-GYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITH 223 (386)
T ss_pred HHHHHHHcCch-hhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 99999999997 46689999999999999999999999999999999999999977666665554 45789999999
Q ss_pred CHHHHHhhCCEEEEEeCCEEEEecCChhhHHh
Q 048654 376 DRDFLNTVCTEIIHLHDQKLHFYRGNFDDFES 407 (723)
Q Consensus 376 dl~~l~~iad~Ii~L~~G~i~~~~g~~~~~~~ 407 (723)
|++++.++.|||.+|++|+|+. .|+++++..
T Consensus 224 DLdEAlriG~rIaimkdG~ivQ-~Gtp~eIl~ 254 (386)
T COG4175 224 DLDEALRIGDRIAIMKDGEIVQ-VGTPEEILL 254 (386)
T ss_pred CHHHHHhccceEEEecCCeEEE-eCCHHHHHc
Confidence 9999999999999999999975 588877643
No 387
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.9e-36 Score=312.79 Aligned_cols=205 Identities=26% Similarity=0.393 Sum_probs=158.5
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCC--CCCcceEEECCc------------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDL--SPTEGEVRRSQK------------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~--~p~~G~I~~~~~------------~ 560 (723)
||+++||++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+++. .
T Consensus 1 ~i~~~nl~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (248)
T PRK09580 1 MLSIKDLHVSVEDK--AILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGE 78 (248)
T ss_pred CeEEEEEEEEeCCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhc
Confidence 57899999999753 5899999999999999999999999999999999995 699999988763 2
Q ss_pred eEEEEccccccccCccccHHHHH---H---hhCCCCCCC---cHHHHHHHHHHhCCCCCCCCcCCCC-CCCHHHHHHHHH
Q 048654 561 RIGRYSQHFVDLLTMEETPVSYL---L---RLHPDQEGL---SKQEAVRAKLGKFGLPSHNHLTPIA-KLSGGQKARVVF 630 (723)
Q Consensus 561 ~ig~~~q~~~~~~~~~~~~~~~~---~---~~~~~~~~~---~~~~~~~~~L~~~gl~~~~~~~~i~-~LSGGqkqRv~l 630 (723)
.++|++|........ +...+. . ..+...... .....+..+++.+++......+++. .|||||||||+|
T Consensus 79 ~i~~~~q~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 79 GIFMAFQYPVEIPGV--SNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred ceEEEecCchhccch--hHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 378888864211111 111110 0 000000000 1134567788999996433445554 799999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHh-cCcCCCcEEEEEECCeEEecCCCH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRV-CDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~-~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+ | |+|++|++|+++ +.|++
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~-----d~i~~l~~g~i~-~~g~~ 230 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKP-----DYVHVLYQGRIV-KSGDF 230 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhC-----CEEEEEECCeEE-EeCCH
Confidence 99999999999999999999999999999988776 36999999999999887 6 599999999997 46787
Q ss_pred HHH
Q 048654 707 EEY 709 (723)
Q Consensus 707 ~~~ 709 (723)
+..
T Consensus 231 ~~~ 233 (248)
T PRK09580 231 TLV 233 (248)
T ss_pred HHH
Confidence 643
No 388
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=9.5e-37 Score=302.44 Aligned_cols=174 Identities=37% Similarity=0.568 Sum_probs=143.3
Q ss_pred EEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccccCcc
Q 048654 497 QLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTME 576 (723)
Q Consensus 497 ~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~~~~~ 576 (723)
+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. + .+ ..
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~-~---~~-----~~-- 67 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKD-L---AS-----LS-- 67 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE-C---Cc-----CC--
Confidence 36899999975 358999999999999999999999999999999999999999999987642 1 00 00
Q ss_pred ccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHH
Q 048654 577 ETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSID 656 (723)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~ 656 (723)
.... ... ...+.++++.+|+.... .+++.+|||||+|||+|||||+.+|++|||||||+|||+.++.
T Consensus 68 --~~~~-~~~---------i~~~~q~l~~~gl~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~ 134 (180)
T cd03214 68 --PKEL-ARK---------IAYVPQALELLGLAHLA-DRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQI 134 (180)
T ss_pred --HHHH-HHH---------HhHHHHHHHHcCCHhHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHH
Confidence 0000 000 00111278889997544 4667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 657 ALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 657 ~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
.+.++|.++ +.|||+||||++++.++|| ++++|++|+++.
T Consensus 135 ~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d-----~~~~l~~g~i~~ 178 (180)
T cd03214 135 ELLELLRRLARERGKTVVMVLHDLNLAARYAD-----RVILLKDGRIVA 178 (180)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEe
Confidence 999999876 3589999999999999995 999999999863
No 389
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.3e-36 Score=314.45 Aligned_cols=220 Identities=20% Similarity=0.265 Sum_probs=155.7
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+....|..|+|.+.+..+...+.....
T Consensus 1 ~i~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~---- 76 (248)
T PRK09580 1 MLSIKDLHVSVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRA---- 76 (248)
T ss_pred CeEEEEEEEEeCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHh----
Confidence 3889999999998899999999999999999999999999999999999853235567777665543221111100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHh------cCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQI------LGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
+..+.++.+.... ............+...+.. +.......++.++++.+++.....++++
T Consensus 77 --------~~~i~~~~q~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (248)
T PRK09580 77 --------GEGIFMAFQYPVE------IPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV 142 (248)
T ss_pred --------hcceEEEecCchh------ccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC
Confidence 0011111110000 0000000000000000000 1111234567888999999644456666
Q ss_pred C-CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhh-CCEEEEEeCC
Q 048654 319 K-SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTV-CTEIIHLHDQ 393 (723)
Q Consensus 319 ~-~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~i-ad~Ii~L~~G 393 (723)
. +|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+ ||+|++|++|
T Consensus 143 ~~~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g 222 (248)
T PRK09580 143 NVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQG 222 (248)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECC
Confidence 5 79999999999999999999999999999999999999999988754 57999999999999987 8999999999
Q ss_pred EEEEecCChh
Q 048654 394 KLHFYRGNFD 403 (723)
Q Consensus 394 ~i~~~~g~~~ 403 (723)
+++ +.|+++
T Consensus 223 ~i~-~~g~~~ 231 (248)
T PRK09580 223 RIV-KSGDFT 231 (248)
T ss_pred eEE-EeCCHH
Confidence 996 457765
No 390
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=348.50 Aligned_cols=207 Identities=23% Similarity=0.313 Sum_probs=165.5
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC--CcceEEECCc-----------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP--TEGEVRRSQK----------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p--~~G~I~~~~~----------- 559 (723)
.++|+++|++++|++ ..+|+||||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~ 80 (506)
T PRK13549 3 EYLLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTE 80 (506)
T ss_pred CceEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHH
Confidence 468999999999975 3589999999999999999999999999999999999996 8999988662
Q ss_pred -eeEEEEccccc--cccCccccHHHHHHhhCC-CCCCC-cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHH
Q 048654 560 -LRIGRYSQHFV--DLLTMEETPVSYLLRLHP-DQEGL-SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 560 -~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral 634 (723)
..++|++|.+. ..+++.++.. +...... ..... .....+.++|+.+|+.... ++++.+|||||||||+|||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~e~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGqkqrv~la~al 158 (506)
T PRK13549 81 RAGIAIIHQELALVKELSVLENIF-LGNEITPGGIMDYDAMYLRAQKLLAQLKLDINP-ATPVGNLGLGQQQLVEIAKAL 158 (506)
T ss_pred HCCeEEEEeccccCCCCcHHHHhh-hcccccccCCcCHHHHHHHHHHHHHHcCCCCCc-ccchhhCCHHHHHHHHHHHHH
Confidence 24899999742 2223332211 1000000 00000 1234578899999997544 567899999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+|| +|++|++|+|+ +.|+++++
T Consensus 159 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d-----~v~~l~~G~i~-~~~~~~~~ 230 (506)
T PRK13549 159 NKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISD-----TICVIRDGRHI-GTRPAAGM 230 (506)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcC-----EEEEEECCEEe-eecccccC
Confidence 9999999999999999999999999999886 3689999999999999995 99999999997 45666654
No 391
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-36 Score=312.69 Aligned_cols=221 Identities=22% Similarity=0.285 Sum_probs=161.8
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
.|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+..|.. ..|.|.+.+..+......
T Consensus 4 ~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~---- 79 (251)
T PRK14249 4 KIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLD---- 79 (251)
T ss_pred eEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccC----
Confidence 5899999999998899999999999999999999999999999999999876542 257777766554321100
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... . ...+.+++..... ..... .......+.++++.+|+.. ...+++
T Consensus 80 -------~~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 144 (251)
T PRK14249 80 -------VVNLRKRVGMVFQQPNP------F-PKSIFDNVAFGPR-MLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKS 144 (251)
T ss_pred -------hHHhhceEEEEecCCcc------C-cCcHHHHHhhHHH-hcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCC
Confidence 00112223333221110 0 1122222221111 11111 1223456777788888642 234688
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|++
T Consensus 145 ~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i 224 (251)
T PRK14249 145 GLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDL 224 (251)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeE
Confidence 9999999999999999999999999999999999999999999999876 47999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+.+ |+.+++
T Consensus 225 ~~~-~~~~~~ 233 (251)
T PRK14249 225 VEY-GRTGEI 233 (251)
T ss_pred EEe-CCHHHH
Confidence 754 665544
No 392
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-36 Score=309.63 Aligned_cols=200 Identities=28% Similarity=0.438 Sum_probs=155.2
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++. ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|
T Consensus 3 l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 81 (229)
T cd03254 3 IEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGV 81 (229)
T ss_pred EEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEE
Confidence 7899999999742 34899999999999999999999999999999999999999999998762 24899
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhC-----------CCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKF-----------GLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----------gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
++|... .+ ..+..+.+ ..+.... ....+..++..+ ++.... .+++.+|||||||||+|||+
T Consensus 82 ~~q~~~-~~--~~tv~~~~-~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~LS~G~~~rv~la~a 153 (229)
T cd03254 82 VLQDTF-LF--SGTIMENI-RLGRPNA---TDEEVIEAAKEAGAHDFIMKLPNGYDTVL-GENGGNLSQGERQLLAIARA 153 (229)
T ss_pred ecCCch-hh--hhHHHHHH-hccCCCC---CHHHHHHHHHHhChHHHHHhCcccccCHh-hcCCCcCCHHHHHHHHHHHH
Confidence 998742 11 12322222 1111111 122233333333 343322 34568999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+.+|++|||||||+|||+.++..|.+.|.++. .|||+||||++++. .| |++++|++|+++. .|+.+++..
T Consensus 154 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~-----d~i~~l~~g~~~~-~~~~~~~~~ 226 (229)
T cd03254 154 MLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIK-NA-----DKILVLDDGKIIE-EGTHDELLA 226 (229)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHh-hC-----CEEEEEeCCeEEE-eCCHHHHHh
Confidence 999999999999999999999999999998874 68999999999986 47 4999999999974 577776653
No 393
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=316.25 Aligned_cols=205 Identities=30% Similarity=0.395 Sum_probs=163.6
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC--------cceEEECCce------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT--------EGEVRRSQKL------ 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~--------~G~I~~~~~~------ 560 (723)
||+++|+++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+++..
T Consensus 1 ml~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 1 MLTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred CeEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 58899999999753 5899999999999999999999999999999999999998 9999987631
Q ss_pred -----eEEEEccccccccCccccHHHHHHhh-CCCC--CC---CcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHH
Q 048654 561 -----RIGRYSQHFVDLLTMEETPVSYLLRL-HPDQ--EG---LSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 561 -----~ig~~~q~~~~~~~~~~~~~~~~~~~-~~~~--~~---~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~ 629 (723)
.++|++|.....+ ..+....+... +... .+ ....+.+..+|+.+|+.... ++++.+|||||+|||+
T Consensus 79 ~~~~~~~~~v~q~~~~~~--~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~ 155 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAF--AFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-GRDVTTLSGGELARVQ 155 (272)
T ss_pred HHHHhhcEEecccCCCCC--CCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHH
Confidence 3688888642111 12222222111 1100 01 01234577899999997654 4678999999999999
Q ss_pred HHHHHc---------cCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEEC
Q 048654 630 FTSISM---------SKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVEN 696 (723)
Q Consensus 630 lAral~---------~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~ 696 (723)
|||||+ .+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+|| ++++|++
T Consensus 156 laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d-----~i~~l~~ 230 (272)
T PRK13547 156 FARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHAD-----RIAMLAD 230 (272)
T ss_pred HHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC-----EEEEEEC
Confidence 999999 599999999999999999999999999875 3689999999999999995 9999999
Q ss_pred CeEEecCCCHHHHH
Q 048654 697 GTVSRFPGTFEEYK 710 (723)
Q Consensus 697 G~i~~~~g~~~~~~ 710 (723)
|+|+. .|+++++.
T Consensus 231 G~i~~-~g~~~~~~ 243 (272)
T PRK13547 231 GAIVA-HGAPADVL 243 (272)
T ss_pred CeEEE-ecCHHHHc
Confidence 99974 57777664
No 394
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-36 Score=310.29 Aligned_cols=204 Identities=28% Similarity=0.417 Sum_probs=157.8
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999999754235899999999999999999999999999999999999999999998763 24889
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHH-H-----HHHHHHHhC--CCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQ-E-----AVRAKLGKF--GLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~L~~~--gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
++|+..- + ..+..+.+ ............ . .+.+++..+ ++.... ..++.+|||||||||+|||||+.
T Consensus 81 ~~q~~~~-~--~~tv~enl-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~ 155 (234)
T cd03251 81 VSQDVFL-F--NDTVAENI-AYGRPGATREEVEEAARAANAHEFIMELPEGYDTVI-GERGVKLSGGQRQRIAIARALLK 155 (234)
T ss_pred eCCCCee-c--cccHHHHh-hccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceee-ccCCCcCCHHHHHHHHHHHHHhc
Confidence 9987421 1 12333322 111111000000 0 133455555 555433 35678999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
+|++|||||||+|||+.+++.+.+.|.++ +.|||+||||++++.. | |+|++|++|+++. .|+++++..
T Consensus 156 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~-----d~v~~l~~G~i~~-~~~~~~~~~ 225 (234)
T cd03251 156 DPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-A-----DRIVVLEDGKIVE-RGTHEELLA 225 (234)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-C-----CEEEEecCCeEee-eCCHHHHHH
Confidence 99999999999999999999999999887 3589999999999975 8 4999999999974 578877654
No 395
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-36 Score=315.68 Aligned_cols=220 Identities=30% Similarity=0.304 Sum_probs=161.2
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC------CcEEEEEeeeeecCCChHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP------KNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~------~~~~i~~~~q~~~~~~~~~ 238 (723)
+|+++|++++|+++.+|+|+||+|.+|++++|+|||||||||||++|+|+..|.. ..|+|.+.+..+.......
T Consensus 1 ml~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 1 MLTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred CeEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 3889999999999999999999999999999999999999999999999875531 0577777666543221111
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHH-HHHH--hcCchHHHHHHHHHHHhCCCCccccC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELY-EKLQ--ILGSDAAEAQASKILAGLGFTKEMQG 315 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~--~~~~~~~~~~~~~~L~~lgl~~~~~~ 315 (723)
+...+.++.+.... .....+.+++.... .... .........++.++|+.+|+.. ..+
T Consensus 81 -------------~~~~~~~v~q~~~~------~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~ 140 (272)
T PRK13547 81 -------------LARLRAVLPQAAQP------AFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATA-LVG 140 (272)
T ss_pred -------------HHhhcEEecccCCC------CCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHh-hhc
Confidence 11112222221100 00112222221110 0000 0011233456888999999974 457
Q ss_pred CCCCCCChHHHHHHHHHHHHc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHh
Q 048654 316 RPTKSFSGGWRMRISLARALF---------VQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNT 382 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~---------~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~ 382 (723)
+++.+|||||+|||+|||||+ .+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++.+
T Consensus 141 ~~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~ 220 (272)
T PRK13547 141 RDVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAAR 220 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHH
Confidence 899999999999999999999 599999999999999999999999998754 5799999999999999
Q ss_pred hCCEEEEEeCCEEEEecCChhhH
Q 048654 383 VCTEIIHLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 383 iad~Ii~L~~G~i~~~~g~~~~~ 405 (723)
+||++++|++|+++. .|+.+++
T Consensus 221 ~~d~i~~l~~G~i~~-~g~~~~~ 242 (272)
T PRK13547 221 HADRIAMLADGAIVA-HGAPADV 242 (272)
T ss_pred hCCEEEEEECCeEEE-ecCHHHH
Confidence 999999999999964 4665544
No 396
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-36 Score=317.71 Aligned_cols=220 Identities=23% Similarity=0.301 Sum_probs=163.5
Q ss_pred ceEEEeEEEEeCC--eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCC-cEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARG--KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPK-NIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~--~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~-~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+..|..+ .|+|.+.+.++......
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~---- 80 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVW---- 80 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHH----
Confidence 5999999999975 5799999999999999999999999999999999998766542 26777776655321111
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
.++..++++.+.... ......+.+++..... ..........+++.++++.+|+.. ..++++.+|
T Consensus 81 ---------~~~~~ig~v~q~~~~-----~~~~~tv~enl~~~~~-~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~L 144 (282)
T PRK13640 81 ---------DIREKVGIVFQNPDN-----QFVGATVGDDVAFGLE-NRAVPRPEMIKIVRDVLADVGMLD-YIDSEPANL 144 (282)
T ss_pred ---------HHHhheEEEEECHHH-----hhccCCHHHHHHhhHH-hCCCCHHHHHHHHHHHHHHCCChh-HhcCCcccC
Confidence 111223332221100 0001122233321111 111223344567899999999974 457999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+|||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+|||+++++. +||+|++|++|+++.
T Consensus 145 S~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~ 223 (282)
T PRK13640 145 SGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLA 223 (282)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999998764 579999999999995 799999999999975
Q ss_pred ecCChhhHH
Q 048654 398 YRGNFDDFE 406 (723)
Q Consensus 398 ~~g~~~~~~ 406 (723)
.|+.+++.
T Consensus 224 -~g~~~~~~ 231 (282)
T PRK13640 224 -QGSPVEIF 231 (282)
T ss_pred -eCCHHHHh
Confidence 47766553
No 397
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-36 Score=313.07 Aligned_cols=224 Identities=25% Similarity=0.391 Sum_probs=162.3
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcE----EEEEeeeeecCCChH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNI----DVLLVEQEVVGDDRS 237 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~----~i~~~~q~~~~~~~~ 237 (723)
..++|+++|++++|+++.+|+|+||+|.+|++++|+|+||||||||+++|+|+..|..|.+ .+.+.+..+.....
T Consensus 7 ~~~~i~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~- 85 (257)
T PRK14246 7 AEDVFNISRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA- 85 (257)
T ss_pred hhhheeeeeEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH-
Confidence 3457999999999999999999999999999999999999999999999999877655542 22222221110000
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---ccc
Q 048654 238 AIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQ 314 (723)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~ 314 (723)
..++..++++.+.... .....+.+++.................++.++++.+|+.. ...
T Consensus 86 ------------~~~~~~i~~~~q~~~~------~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 147 (257)
T PRK14246 86 ------------IKLRKEVGMVFQQPNP------FPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRL 147 (257)
T ss_pred ------------HHHhcceEEEccCCcc------CCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhh
Confidence 0112223333221110 0111223333221111001112334567889999999852 234
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
++.+..||||||||++|||||+.+|+||||||||++||+.++.++.++|.++ +.|||+|||+++++..+||++++|++
T Consensus 148 ~~~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~ 227 (257)
T PRK14246 148 NSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYN 227 (257)
T ss_pred cCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEEC
Confidence 6888999999999999999999999999999999999999999999999876 47999999999999999999999999
Q ss_pred CEEEEecCChhhH
Q 048654 393 QKLHFYRGNFDDF 405 (723)
Q Consensus 393 G~i~~~~g~~~~~ 405 (723)
|+++.+ |+.+++
T Consensus 228 g~i~~~-g~~~~~ 239 (257)
T PRK14246 228 GELVEW-GSSNEI 239 (257)
T ss_pred CEEEEE-CCHHHH
Confidence 999754 665554
No 398
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-36 Score=314.37 Aligned_cols=222 Identities=22% Similarity=0.278 Sum_probs=163.3
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~~~ 240 (723)
++|+++|+++.|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+..+.| ..|+|.+.++.+.......
T Consensus 5 ~~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~-- 82 (253)
T PRK14261 5 IILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV-- 82 (253)
T ss_pred ceEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch--
Confidence 46999999999999999999999999999999999999999999999999865433 3688887776553210000
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQGR 316 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~ 316 (723)
..++..++++.+.... . ...+.+++.... ..... .....+.++.++++.+++.. ...++
T Consensus 83 ---------~~~~~~i~~~~q~~~~------~-~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~ 145 (253)
T PRK14261 83 ---------VALRRKIGMVFQRPNP------F-PKSIYENVAYGP-RIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHD 145 (253)
T ss_pred ---------hhhhceEEEEecCCcc------C-cccHHHHHHhhH-HhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhc
Confidence 0111222332221110 0 012222222111 11111 11233456778888888742 23468
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+||||||||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||++||+++++..+||+|++|++|+
T Consensus 146 ~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~ 225 (253)
T PRK14261 146 SALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGK 225 (253)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999865 4799999999999999999999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++. .|+.+++
T Consensus 226 i~~-~g~~~~~ 235 (253)
T PRK14261 226 LIE-FDKTTQI 235 (253)
T ss_pred EEE-cCCHHHH
Confidence 964 4666554
No 399
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=319.14 Aligned_cols=218 Identities=22% Similarity=0.271 Sum_probs=162.8
Q ss_pred ceEEEeEEEEeCC--eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 165 DITIDNFSVAARG--KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 165 ~I~l~nls~~y~~--~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
+|+++||++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.......
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~~~~~~~---- 78 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLSEETVWD---- 78 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECCcCcHHH----
Confidence 5999999999974 5799999999999999999999999999999999998654 5667777776653222111
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
+...++++.+.... ......+.+++..... ...........++.++++.+||.. ..++++.+||
T Consensus 79 ---------~~~~i~~~~q~~~~-----~~~~~tv~enl~~~~~-~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LS 142 (279)
T PRK13635 79 ---------VRRQVGMVFQNPDN-----QFVGATVQDDVAFGLE-NIGVPREEMVERVDQALRQVGMED-FLNREPHRLS 142 (279)
T ss_pred ---------HhhheEEEEeCHHH-----hcccccHHHHHhhhHh-hCCCCHHHHHHHHHHHHHHcCChh-hhhCCcccCC
Confidence 11122222211000 0001122232221111 111223344567899999999974 4578999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 323 GGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 323 GGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
|||||||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++.. ||+|++|++|+++ +
T Consensus 143 ~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~-~ 220 (279)
T PRK13635 143 GGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEIL-E 220 (279)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEE-E
Confidence 99999999999999999999999999999999999999999764 5799999999999974 9999999999986 4
Q ss_pred cCChhhHH
Q 048654 399 RGNFDDFE 406 (723)
Q Consensus 399 ~g~~~~~~ 406 (723)
.|+.+++.
T Consensus 221 ~g~~~~~~ 228 (279)
T PRK13635 221 EGTPEEIF 228 (279)
T ss_pred ECCHHHHh
Confidence 57766553
No 400
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.9e-36 Score=309.15 Aligned_cols=193 Identities=27% Similarity=0.362 Sum_probs=153.1
Q ss_pred eEEEEEEEEEcCCC-----cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEEC--C---c-----
Q 048654 495 LLQLIEVSFSYPNR-----EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRS--Q---K----- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~-----~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~--~---~----- 559 (723)
||+++|+++.|++. ...+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.++ + .
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 57899999999631 1358999999999999999999999999999999999999999999886 2 1
Q ss_pred ---------eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHH
Q 048654 560 ---------LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARV 628 (723)
Q Consensus 560 ---------~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv 628 (723)
..++|++|... ..+++.++.... ..... .......+.+.++++.+|+.....++++.+|||||||||
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl 158 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEP-LLERG-VPREAARARARELLARLNIPERLWHLPPATFSGGEQQRV 158 (224)
T ss_pred HHHHHHHHhcceEEEecccccCCCccHHHHHHHH-HHHcC-CCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHH
Confidence 24789998742 222333332111 11111 100012346778999999975444567899999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEE
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVV 694 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl 694 (723)
+|||||+.+|++|||||||+|||+.+...+.++|+++ +.|||+||||.+++..+|| +++.+
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d-----~i~~~ 222 (224)
T TIGR02324 159 NIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVAD-----RVMDV 222 (224)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcc-----eeEec
Confidence 9999999999999999999999999999999999886 3589999999999999995 88876
No 401
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.1e-36 Score=307.29 Aligned_cols=197 Identities=30% Similarity=0.465 Sum_probs=156.4
Q ss_pred eEEEEEEEEEcCCC--cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-------------
Q 048654 495 LLQLIEVSFSYPNR--EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~--~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------- 559 (723)
+|+++|+++.|++. ...+|+++||++.+|++++|+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 1 ~l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (220)
T TIGR02982 1 VISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQL 80 (220)
T ss_pred CEEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHH
Confidence 37899999999742 145899999999999999999999999999999999999999999988653
Q ss_pred -eeEEEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 560 -LRIGRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 560 -~~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
..++|++|+.. ..+++.++.. +....+...........+.++++.+||.... .+++.+||||||||++|||+|+.
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~~n~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~lS~G~~qrv~laral~~ 158 (220)
T TIGR02982 81 RRNIGYIFQAHNLLGFLTARQNVQ-MALELQPNLSYQEARERARAMLEAVGLGDHL-DYYPHNLSGGQKQRVAIARALVH 158 (220)
T ss_pred HhheEEEcCChhhcCCCCHHHHHH-HHHHhccCCCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHhc
Confidence 24889998742 2233333322 1111111110001234578899999997544 45678999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
+|++|||||||+|||+.++..+.++|+++ +.|||+||||++++ .+|| +|++|++|++
T Consensus 159 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d-----~v~~l~~g~~ 219 (220)
T TIGR02982 159 RPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVAD-----RIVHMEDGKL 219 (220)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCC-----EEEEEECCEE
Confidence 99999999999999999999999999775 46999999999964 6884 9999999986
No 402
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-36 Score=309.59 Aligned_cols=204 Identities=27% Similarity=0.394 Sum_probs=163.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
|+++|+++.|++ . +|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|++++. ..++|++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~ 77 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVP 77 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEe
Confidence 468999999974 2 799999999999999999999999999999999999999999988763 2589999
Q ss_pred cccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|... ..+++.++.. +...... .........+.++++.+||.... .+++.+|||||+|||+|||||+.+|++||||
T Consensus 78 q~~~~~~~~t~~e~l~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllD 154 (235)
T cd03299 78 QNYALFPHMTVYKNIA-YGLKKRK-VDKKEIERKVLEIAEMLGIDHLL-NRKPETLSGGEQQRVAIARALVVNPKILLLD 154 (235)
T ss_pred ecCccCCCccHHHHHH-HHHHHcC-CCHHHHHHHHHHHHHHcCChhHH-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 8742 2233333321 1111110 00001234567889999997544 4667999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 645 EPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|||+|||+.++..+.++|+++ +.|||++||+++++..+|| +|++|++|+++. .|+++++.+
T Consensus 155 EPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~~ 219 (235)
T cd03299 155 EPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALAD-----KVAIMLNGKLIQ-VGKPEEVFK 219 (235)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEEECCEEEE-ecCHHHHHh
Confidence 999999999999999999875 4689999999999999995 999999999974 577776644
No 403
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-36 Score=312.47 Aligned_cols=208 Identities=22% Similarity=0.302 Sum_probs=162.0
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~--------- 559 (723)
++|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 2 NKFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred CeEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 36899999999975 3589999999999999999999999999999999999986 5999987652
Q ss_pred ---eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 560 ---~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lAr 632 (723)
..++|++|..... .++.++... ..............+.+..+++.+++.. .....++.+|||||||||+|||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lar 158 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAY-GLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIAR 158 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHh-HHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHH
Confidence 2378998874211 222222211 1111100000011234667788888743 1224567899999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|++|+|+. .|+.+++.
T Consensus 159 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~~~~ 232 (249)
T PRK14253 159 TIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISD-----RTAFFLMGELVE-HDDTQVIF 232 (249)
T ss_pred HHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999874 689999999999999995 999999999975 57777664
No 404
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-36 Score=312.01 Aligned_cols=223 Identities=22% Similarity=0.267 Sum_probs=163.9
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC-C--CcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV-P--KNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~-~--~~~~i~~~~q~~~~~~~~~~~ 240 (723)
..|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+. | ..|.|.+.++.+......
T Consensus 6 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~--- 82 (259)
T PRK14260 6 PAIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN--- 82 (259)
T ss_pred ceEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc---
Confidence 3699999999999889999999999999999999999999999999999986643 2 467888776654321100
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... . ...+.+++.................++.++++.+|+.. ...+++
T Consensus 83 --------~~~~~~~i~~v~q~~~l------~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 147 (259)
T PRK14260 83 --------INRLRRQIGMVFQRPNP------F-PMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKS 147 (259)
T ss_pred --------hHhhhhheEEEeccccc------C-CccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCC
Confidence 00112223333221110 0 11222222211111001122233456788899998742 245788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEe----
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLH---- 391 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~---- 391 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||++++|+
T Consensus 148 ~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~ 227 (259)
T PRK14260 148 ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDES 227 (259)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCC
Confidence 9999999999999999999999999999999999999999999999875 4799999999999999999999998
Q ss_pred -CCEEEEecCChhhH
Q 048654 392 -DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 -~G~i~~~~g~~~~~ 405 (723)
+|+++. .|+..++
T Consensus 228 ~~G~i~~-~~~~~~~ 241 (259)
T PRK14260 228 RIGQMVE-FGVTTQI 241 (259)
T ss_pred CCceEEE-eCCHHHH
Confidence 599874 4776655
No 405
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=314.36 Aligned_cols=221 Identities=21% Similarity=0.267 Sum_probs=160.4
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
.+|+++||+++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+..+. |..|+|.+.+.++.......
T Consensus 12 ~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~-- 89 (269)
T PRK14259 12 IIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP-- 89 (269)
T ss_pred ceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH--
Confidence 4699999999999999999999999999999999999999999999999986531 46778877666543111000
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
..++..++++.+.... . ...+.+++.... ...... .....++.++++.+++.. ...+++
T Consensus 90 ---------~~~~~~i~~v~q~~~l------~-~~tv~enl~~~~-~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~ 151 (269)
T PRK14259 90 ---------VEVRRRIGMVFQQPNP------F-PKSIYENIAFGA-RINGYT-GDMDELVERSLRKAAVWDECKDKLNES 151 (269)
T ss_pred ---------HHHhhceEEEccCCcc------c-hhhHHHHHhhhh-hhcCCc-HHHHHHHHHHHHHhCCcchhhhhhCCC
Confidence 0112223333221100 0 112222221111 111111 223456777888887631 235788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeC---
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHD--- 392 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~--- 392 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++
T Consensus 152 ~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~ 231 (269)
T PRK14259 152 GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEV 231 (269)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccc
Confidence 9999999999999999999999999999999999999999999999876 46999999999999999999999996
Q ss_pred --------CEEEEecCChhhH
Q 048654 393 --------QKLHFYRGNFDDF 405 (723)
Q Consensus 393 --------G~i~~~~g~~~~~ 405 (723)
|+++ ..|+..++
T Consensus 232 ~~~~~g~~g~~~-~~~~~~~~ 251 (269)
T PRK14259 232 EGGSGGKVGYLV-EFNETKKI 251 (269)
T ss_pred ccccccccceEE-EeCCHHHH
Confidence 4555 34666554
No 406
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.6e-36 Score=305.20 Aligned_cols=187 Identities=28% Similarity=0.416 Sum_probs=152.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce----------eEEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL----------RIGR 564 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~----------~ig~ 564 (723)
||+++|+++.|++. .+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|
T Consensus 1 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~ 78 (204)
T PRK13538 1 MLEARNLACERDER--ILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLY 78 (204)
T ss_pred CeEEEEEEEEECCE--EEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEE
Confidence 58899999999753 58999999999999999999999999999999999999999999987632 4778
Q ss_pred Eccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 565 YSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 565 ~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
++|... ..+++.++.... ...+. ......+..+++.+||.... ++++.+|||||||||+|||||+.+|+|||
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~-~~~~~----~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~la~al~~~p~lll 152 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFY-QRLHG----PGDDEALWEALAQVGLAGFE-DVPVRQLSAGQQRRVALARLWLTRAPLWI 152 (204)
T ss_pred eCCccccCcCCcHHHHHHHH-HHhcC----ccHHHHHHHHHHHcCCHHHh-hCChhhcCHHHHHHHHHHHHHhcCCCEEE
Confidence 887532 222333332111 11111 12345678899999997544 46789999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEE
Q 048654 643 LDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVV 694 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl 694 (723)
|||||+|||+.++..+.++|+++ +.|||+||||.+++.. |+ .|++++
T Consensus 153 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~-~~----~~~~~~ 202 (204)
T PRK13538 153 LDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVAS-DK----VRKLRL 202 (204)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhcc-CC----ceEEec
Confidence 99999999999999999999887 4699999999999987 54 488877
No 407
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.4e-36 Score=344.45 Aligned_cols=201 Identities=25% Similarity=0.294 Sum_probs=163.3
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
+|+++|+++.|++. .+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++
T Consensus 3 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 69999999999753 4899999999999999999999999999999999999999999987542 1267
Q ss_pred EEcccccccc-Cc-----cccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccC
Q 048654 564 RYSQHFVDLL-TM-----EETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSK 637 (723)
Q Consensus 564 ~~~q~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~ 637 (723)
|++|.....+ .. ..+....+ .. .....+++.++++.+||.... ++++.+|||||||||+||+||+.+
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~ 153 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEII-QD-----EVKDPARCEQLAQQFGITALL-DRRFKYLSTGETRKTLLCQALMSE 153 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhc-cc-----chhHHHHHHHHHHHcCCHhhh-hCCcccCCHHHHHHHHHHHHHHcC
Confidence 8888642111 11 01111111 00 011245678899999997544 577899999999999999999999
Q ss_pred CCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 638 PHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 638 p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|++|||||||+|||+.++..+.++|.++ +.|||+||||++++.++|| +|++|++|+++. .|+++++.
T Consensus 154 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d-----~v~~l~~G~i~~-~~~~~~~~ 223 (490)
T PRK10938 154 PDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQ-----FAGVLADCTLAE-TGEREEIL 223 (490)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCC-----EEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999887 3699999999999999995 999999999974 57777653
No 408
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-36 Score=315.04 Aligned_cols=210 Identities=28% Similarity=0.338 Sum_probs=163.7
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
..++|+++|+++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+++.
T Consensus 22 ~~~~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGDK--QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECCe--eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 35689999999999753 58999999999999999999999999999999999987 48999987652
Q ss_pred ------eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ------~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|...-. .++.++... ................+..+++.+++.. ...++++.+|||||||||+
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVY-GLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHH-HHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 2478998864211 122222211 1111110000001244677888888853 1234567899999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHH
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFE 707 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~ 707 (723)
|||||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| +|++|++|+|+. .|+++
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d-----~i~~l~~G~i~~-~g~~~ 252 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSD-----YTAFMYMGKLVE-YGDTD 252 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCC-----EEEEEECCEEEe-cCCHH
Confidence 9999999999999999999999999999999998874 689999999999999995 999999999974 57777
Q ss_pred HHH
Q 048654 708 EYK 710 (723)
Q Consensus 708 ~~~ 710 (723)
++.
T Consensus 253 ~~~ 255 (272)
T PRK14236 253 TLF 255 (272)
T ss_pred HHh
Confidence 654
No 409
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.5e-36 Score=311.96 Aligned_cols=206 Identities=23% Similarity=0.355 Sum_probs=158.4
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcC--CCCCcceEEECCce----------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGD--LSPTEGEVRRSQKL---------- 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl--~~p~~G~I~~~~~~---------- 560 (723)
+++|+++||++.|++. .+|++|||+|.+|++++|+|+||||||||+++|+|+ ++|++|+|++++..
T Consensus 5 ~~~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T CHL00131 5 KPILEIKNLHASVNEN--EILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERA 82 (252)
T ss_pred CceEEEEeEEEEeCCE--EeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhh
Confidence 4589999999999753 589999999999999999999999999999999998 58999999876531
Q ss_pred --eEEEEccccc--cccCccccHHHHHHhhCC---CCCCCc---HHHHHHHHHHhCCCCCCCCcCCCC-CCCHHHHHHHH
Q 048654 561 --RIGRYSQHFV--DLLTMEETPVSYLLRLHP---DQEGLS---KQEAVRAKLGKFGLPSHNHLTPIA-KLSGGQKARVV 629 (723)
Q Consensus 561 --~ig~~~q~~~--~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~L~~~gl~~~~~~~~i~-~LSGGqkqRv~ 629 (723)
.++|++|... ..++..++. ........ ...... ....+.++|+.+|+......+++. .|||||+|||+
T Consensus 83 ~~~~~~~~q~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~ 161 (252)
T CHL00131 83 HLGIFLAFQYPIEIPGVSNADFL-RLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNE 161 (252)
T ss_pred eeeEEEEeccccccccccHHHHH-HHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHH
Confidence 2567777632 111111111 10011000 000001 124567889999997333335555 59999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHh-cCcCCCcEEEEEECCeEEecCCC
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRV-CDDEERSEIWVVENGTVSRFPGT 705 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~-~d~~~~drv~vl~~G~i~~~~g~ 705 (723)
|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+ | |++++|++|+++ +.|+
T Consensus 162 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~-----d~i~~l~~G~i~-~~~~ 235 (252)
T CHL00131 162 ILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKP-----DYVHVMQNGKII-KTGD 235 (252)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhC-----CEEEEEeCCEEE-EecC
Confidence 999999999999999999999999999999999876 36899999999999887 6 499999999997 4577
Q ss_pred HH
Q 048654 706 FE 707 (723)
Q Consensus 706 ~~ 707 (723)
++
T Consensus 236 ~~ 237 (252)
T CHL00131 236 AE 237 (252)
T ss_pred hh
Confidence 76
No 410
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-36 Score=305.37 Aligned_cols=204 Identities=23% Similarity=0.331 Sum_probs=152.1
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|++++|+++.+ |+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+......
T Consensus 1 i~~~~l~~~~~~~~~--~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~~~~~~-------- 68 (211)
T cd03298 1 VRLDKIRFSYGEQPM--HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVTAAPPA-------- 68 (211)
T ss_pred CEEEeEEEEeCCEec--ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCcCCHh--------
Confidence 478999999987653 99999999999999999999999999999998754 456676666554322110
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
+..++++.+.... .....+.+++..... .... ......++.++++.+|+.. ..++++.+||||
T Consensus 69 -------~~~i~~~~q~~~~------~~~~tv~enl~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G 132 (211)
T cd03298 69 -------DRPVSMLFQENNL------FAHLTVEQNVGLGLS--PGLKLTAEDRQAIEVALARVGLAG-LEKRLPGELSGG 132 (211)
T ss_pred -------HccEEEEeccccc------CCCCcHHHHHhcccc--cccCccHHHHHHHHHHHHHcCCHH-HHhCCcccCCHH
Confidence 0112222111100 001122222211110 0001 1234567889999999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 133 ~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 209 (211)
T cd03298 133 ERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAA 209 (211)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEee
Confidence 999999999999999999999999999999999999998754 5799999999999999999999999999863
No 411
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=332.86 Aligned_cols=211 Identities=24% Similarity=0.315 Sum_probs=164.5
Q ss_pred CCCeEEEEEEEEEcCCCc-ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCcee-EEEEcccc
Q 048654 492 TPPLLQLIEVSFSYPNRE-DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLR-IGRYSQHF 569 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~-~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~-ig~~~q~~ 569 (723)
..++++++||++.|++.. .++|++|||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++... +++ ...+
T Consensus 18 ~~~mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~~i~~-~~~l 96 (549)
T PRK13545 18 NKPFDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAALIAI-SSGL 96 (549)
T ss_pred ccceeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEeeeEEe-cccc
Confidence 356899999999997642 3589999999999999999999999999999999999999999999987542 222 1112
Q ss_pred ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCC
Q 048654 570 VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNH 649 (723)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~ 649 (723)
...+++.++.... .. ..........+.+..+++.+++.... ++++.+|||||||||+|||||+.+|+||||||||+|
T Consensus 97 ~~~lTV~EnL~l~-~~-~~~~~~~e~~e~i~elLe~lgL~~~l-d~~~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsg 173 (549)
T PRK13545 97 NGQLTGIENIELK-GL-MMGLTKEKIKEIIPEIIEFADIGKFI-YQPVKTYSSGMKSRLGFAISVHINPDILVIDEALSV 173 (549)
T ss_pred CCCCcHHHHHHhh-hh-hcCCCHHHHHHHHHHHHHHcCChhHh-hCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccc
Confidence 2223333332110 11 11110001123466789999997544 467899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 650 LDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 650 LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
||+.++..+.+.|.++ +.|||+||||++++..+|| ++++|++|+++. .|+++++...
T Consensus 174 LD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~D-----rIivL~~GkIv~-~G~~~el~~~ 233 (549)
T PRK13545 174 GDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCT-----KALWLHYGQVKE-YGDIKEVVDH 233 (549)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCC-----EEEEEECCEEEE-ECCHHHHHhh
Confidence 9999999999999876 3699999999999999995 999999999975 5787776544
No 412
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.6e-36 Score=315.00 Aligned_cols=222 Identities=19% Similarity=0.261 Sum_probs=157.8
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
..+|+++||++.|+++.+|+||||+|.+|+++||+|+||||||||+++|+|+....|..|+|.+.+.++..........
T Consensus 5 ~~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~- 83 (252)
T CHL00131 5 KPILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAH- 83 (252)
T ss_pred CceEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhe-
Confidence 3469999999999988999999999999999999999999999999999997322355677777665543221111000
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHH---h---cCchHHHHHHHHHHHhCCCCccccCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQ---I---LGSDAAEAQASKILAGLGFTKEMQGR 316 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~---~~~~~~~~~~~~~L~~lgl~~~~~~~ 316 (723)
..+.++.+.... .......+.+...+.... . ........++.++|+.+|+.....++
T Consensus 84 -----------~~~~~~~q~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 146 (252)
T CHL00131 84 -----------LGIFLAFQYPIE------IPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSR 146 (252)
T ss_pred -----------eeEEEEeccccc------cccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhcc
Confidence 000111110000 000011111111110000 0 01112345678899999996334467
Q ss_pred CCC-CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhh-CCEEEEEe
Q 048654 317 PTK-SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTV-CTEIIHLH 391 (723)
Q Consensus 317 ~~~-~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~i-ad~Ii~L~ 391 (723)
++. .|||||+|||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+||||++++..+ ||+|++|+
T Consensus 147 ~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~ 226 (252)
T CHL00131 147 NVNEGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQ 226 (252)
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEe
Confidence 776 59999999999999999999999999999999999999999999865 57999999999999887 89999999
Q ss_pred CCEEEEecCChh
Q 048654 392 DQKLHFYRGNFD 403 (723)
Q Consensus 392 ~G~i~~~~g~~~ 403 (723)
+|+++ +.|+.+
T Consensus 227 ~G~i~-~~~~~~ 237 (252)
T CHL00131 227 NGKII-KTGDAE 237 (252)
T ss_pred CCEEE-EecChh
Confidence 99996 456654
No 413
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-36 Score=312.76 Aligned_cols=207 Identities=23% Similarity=0.336 Sum_probs=160.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-----------
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK----------- 559 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~----------- 559 (723)
-+++||++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 368899999974 358999999999999999999999999999999999986 47999987652
Q ss_pred --eeEEEEccccccc-cCccccHHHHHHhhCCCCCC-CcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHHHH
Q 048654 560 --LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEG-LSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 560 --~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~lAr 632 (723)
..++|++|...-. .++.++.. +.......... ......+..+++.+|+... ...+++..|||||||||+|||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~lar 162 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVA-YGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIAR 162 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHH
Confidence 2478999874211 12222221 11111110000 0122446788999998641 223567899999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
+|+.+|+||||||||+|||+.++..+.+.|.++. .|||+||||++++..+|| +|++|++|+++. .|+++++.
T Consensus 163 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 236 (251)
T PRK14244 163 AIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSD-----RVAFFQSGRIVE-YNTTQEIF 236 (251)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcC-----EEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999999998874 689999999999999995 999999999974 57777764
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
.
T Consensus 237 ~ 237 (251)
T PRK14244 237 K 237 (251)
T ss_pred c
Confidence 3
No 414
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.5e-36 Score=310.04 Aligned_cols=206 Identities=24% Similarity=0.337 Sum_probs=153.2
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
++|+++||++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+......
T Consensus 6 ~~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~------ 77 (225)
T PRK10247 6 PLLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDISTLKPE------ 77 (225)
T ss_pred ceEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEEcCcCCHH------
Confidence 369999999999989999999999999999999999999999999999998654 456666666554322111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
.++..++++.+.... . ...+.+++.... .+ ........++.++++.+|+.....++++.+|||
T Consensus 78 -------~~~~~i~~~~q~~~l------~-~~tv~enl~~~~-~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~ 140 (225)
T PRK10247 78 -------IYRQQVSYCAQTPTL------F-GDTVYDNLIFPW-QI--RNQQPDPAIFLDDLERFALPDTILTKNIAELSG 140 (225)
T ss_pred -------HHHhccEEEeccccc------c-cccHHHHHHhHH-hh--cCCChHHHHHHHHHHHcCCChHHhcCCcccCCH
Confidence 011222332221110 0 112222222111 11 111122456788999999964445789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEe--CCEE
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLH--DQKL 395 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~--~G~i 395 (723)
||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++. .||+|++|+ .|++
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~ 217 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEM 217 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchH
Confidence 9999999999999999999999999999999999999988764 579999999999996 699999996 4554
No 415
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-36 Score=314.44 Aligned_cols=223 Identities=21% Similarity=0.297 Sum_probs=161.4
Q ss_pred ccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHHH
Q 048654 163 VKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSAI 239 (723)
Q Consensus 163 ~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~~ 239 (723)
.++|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+ .|..|+|.+.+..+......
T Consensus 22 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~-- 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS-- 99 (271)
T ss_pred ceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc--
Confidence 3479999999999988999999999999999999999999999999999998642 14667787766554211100
Q ss_pred HHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHhCCCC---ccccC
Q 048654 240 QAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGS-DAAEAQASKILAGLGFT---KEMQG 315 (723)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~L~~lgl~---~~~~~ 315 (723)
...++..++++.+.... . ...+.+++..... ...... ......+.++++.+++. ....+
T Consensus 100 ---------~~~~~~~i~~v~q~~~~------~-~~tv~eni~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 162 (271)
T PRK14238 100 ---------VEELRTNVGMVFQKPNP------F-PKSIYDNVTYGPK-IHGIKDKKTLDEIVEKSLRGAAIWDELKDRLH 162 (271)
T ss_pred ---------HHHHhhhEEEEecCCcc------c-cccHHHHHHHHHH-hcCCCcHHHHHHHHHHHHHHcCCcchHHHHHh
Confidence 00112223333221110 0 0122222221111 111111 12244567777777532 12346
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
+++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 163 ~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G 242 (271)
T PRK14238 163 DNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNG 242 (271)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999999876 479999999999999999999999999
Q ss_pred EEEEecCChhhH
Q 048654 394 KLHFYRGNFDDF 405 (723)
Q Consensus 394 ~i~~~~g~~~~~ 405 (723)
+++.+ |+..++
T Consensus 243 ~i~~~-g~~~~~ 253 (271)
T PRK14238 243 YVNEY-DDTDKI 253 (271)
T ss_pred EEEEe-CCHHHH
Confidence 99754 666554
No 416
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-36 Score=316.31 Aligned_cols=219 Identities=20% Similarity=0.236 Sum_probs=161.5
Q ss_pred ceEEEeEEEEeCC------eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHH
Q 048654 165 DITIDNFSVAARG------KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 165 ~I~l~nls~~y~~------~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~ 238 (723)
+|+++|++++|++ +++|+|+||+|.+|++++|+|+||||||||+++|+|++.| ..|.|.+.+..+......
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i~~~~~~- 80 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDTSDEENL- 80 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeccccccH-
Confidence 5899999999963 5799999999999999999999999999999999998765 456676666554321100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPT 318 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~ 318 (723)
..++..++++.+.... ......+.+.+..... ...........++.++++.+|+.. ..++++
T Consensus 81 -----------~~~~~~i~~v~q~~~~-----~~~~~~v~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~ 142 (280)
T PRK13633 81 -----------WDIRNKAGMVFQNPDN-----QIVATIVEEDVAFGPE-NLGIPPEEIRERVDESLKKVGMYE-YRRHAP 142 (280)
T ss_pred -----------HHHhhheEEEecChhh-----hhccccHHHHHHhhHh-hcCCCHHHHHHHHHHHHHHCCCHh-HhhCCc
Confidence 0111222222221000 0000011222211111 111223344567899999999974 457999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 319 KSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 319 ~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
.+|||||||||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++.. ||++++|++|+
T Consensus 143 ~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~ 221 (280)
T PRK13633 143 HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGK 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999764 5799999999999986 99999999999
Q ss_pred EEEecCChhhHH
Q 048654 395 LHFYRGNFDDFE 406 (723)
Q Consensus 395 i~~~~g~~~~~~ 406 (723)
++. .|+.+++.
T Consensus 222 i~~-~g~~~~~~ 232 (280)
T PRK13633 222 VVM-EGTPKEIF 232 (280)
T ss_pred EEE-ecCHHHHh
Confidence 964 57776653
No 417
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=314.05 Aligned_cols=208 Identities=23% Similarity=0.278 Sum_probs=162.8
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~------- 559 (723)
..++|+++||++.|++. .+|+++||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 17 ~~~~l~~~nl~~~~~~~--~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~ 94 (274)
T PRK14265 17 DHSVFEVEGVKVFYGGF--LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQI 94 (274)
T ss_pred CCceEEEeeEEEEeCCe--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccc
Confidence 45699999999999753 589999999999999999999999999999999999863 6899987652
Q ss_pred ------eeEEEEccccccccCccccHHHHHHhh-CCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHH
Q 048654 560 ------LRIGRYSQHFVDLLTMEETPVSYLLRL-HPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVV 629 (723)
Q Consensus 560 ------~~ig~~~q~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~ 629 (723)
..++|++|+... +. .++...+... ............+..+++.+++.. ....+++.+|||||+|||+
T Consensus 95 ~~~~~~~~i~~v~q~~~l-~~--~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~ 171 (274)
T PRK14265 95 NSVKLRRQVGMVFQRPNP-FP--KSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLC 171 (274)
T ss_pred hhHHHhhcEEEEccCCcc-cc--ccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHH
Confidence 247899987421 11 1222222110 000000012234566788888631 1234677899999999999
Q ss_pred HHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEE---------CCe
Q 048654 630 FTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVE---------NGT 698 (723)
Q Consensus 630 lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~---------~G~ 698 (723)
|||||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|+ +|+
T Consensus 172 LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~~~~~~~~~~G~ 246 (274)
T PRK14265 172 IARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVAD-----WTAFFNTEIDEYGKRRGK 246 (274)
T ss_pred HHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEecccccccccCce
Confidence 9999999999999999999999999999999999874 689999999999999995 999997 899
Q ss_pred EEecCCCHHHHH
Q 048654 699 VSRFPGTFEEYK 710 (723)
Q Consensus 699 i~~~~g~~~~~~ 710 (723)
++. .|+++++.
T Consensus 247 ~~~-~g~~~~~~ 257 (274)
T PRK14265 247 LVE-FSPTEQMF 257 (274)
T ss_pred EEE-eCCHHHHH
Confidence 985 58887764
No 418
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.1e-36 Score=309.07 Aligned_cols=204 Identities=30% Similarity=0.449 Sum_probs=163.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc---------eeEEEEc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK---------LRIGRYS 566 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~---------~~ig~~~ 566 (723)
|+++|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~ 78 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVF 78 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEe
Confidence 4689999999753 5899999999999999999999999999999999999999999987652 2478998
Q ss_pred cccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|... ...++.++.. +....+. .......+.+.++++.+++.... ++++..|||||+||++|||+|+.+|+|||||
T Consensus 79 q~~~~~~~~t~~enl~-~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (237)
T TIGR00968 79 QHYALFKHLTVRDNIA-FGLEIRK-HPKAKIKARVEELLELVQLEGLG-DRYPNQLSGGQRQRVALARALAVEPQVLLLD 155 (237)
T ss_pred cChhhccCCcHHHHHH-hHHHhcC-CCHHHHHHHHHHHHHHcCCHhHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8642 2223333321 1111111 00001234567899999997543 4667899999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 645 EPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
|||+|||+.+...+.++|.++ +.|||++||+++++.++|| +|++|++|+++. .|+.+++.
T Consensus 156 EP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d-----~i~~l~~g~i~~-~~~~~~~~ 219 (237)
T TIGR00968 156 EPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVAD-----RIVVMSNGKIEQ-IGSPDEVY 219 (237)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcC-----EEEEEECCEEEE-ecCHHHHH
Confidence 999999999999999999875 4689999999999999995 999999999975 47777664
No 419
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=310.09 Aligned_cols=220 Identities=22% Similarity=0.291 Sum_probs=161.3
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC--C-CCcEEEEEeeeeecCCChHHHHHH
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP--V-PKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~--~-~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
-+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+ . |..|+|.+.+..+......
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~----- 80 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTN----- 80 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccc-----
Confidence 4689999999989999999999999999999999999999999999998652 2 3578887766543211100
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc--CchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL--GSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... . ...+.+++.... ..... ........+.++++.+|+.. ...+++
T Consensus 81 ------~~~~~~~i~~v~q~~~~------~-~~tv~~ni~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 146 (251)
T PRK14244 81 ------VVLLRAKVGMVFQKPNP------F-PKSIYDNVAYGP-KLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDS 146 (251)
T ss_pred ------hHHHhhhEEEEecCccc------c-cCCHHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcC
Confidence 00122233333221110 0 012222222111 11111 11233456788999999853 134678
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|++
T Consensus 147 ~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i 226 (251)
T PRK14244 147 AFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRI 226 (251)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999999865 57999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
+. .|+.+++
T Consensus 227 ~~-~~~~~~~ 235 (251)
T PRK14244 227 VE-YNTTQEI 235 (251)
T ss_pred EE-eCCHHHH
Confidence 74 4665544
No 420
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=298.20 Aligned_cols=220 Identities=21% Similarity=0.282 Sum_probs=165.9
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHH-HHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAI-QAV 242 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~-~~~ 242 (723)
++++++||+..||...+|++|||++++||+++|+|+||+||||||++|+|+.. +.+|+|.|.++++.......+ ..-
T Consensus 2 ~mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 2 PMLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred CceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCC
Confidence 46999999999999999999999999999999999999999999999998754 347888998988876543321 111
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGS-DAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
+.+.|+-..++..++ +.+++.-... .... .......+++.+.|---.+..+++..+|
T Consensus 80 i~~VPegR~iF~~LT-------------------VeENL~~g~~---~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~L 137 (237)
T COG0410 80 IAYVPEGRRIFPRLT-------------------VEENLLLGAY---ARRDKEAQERDLEEVYELFPRLKERRNQRAGTL 137 (237)
T ss_pred eEeCcccccchhhCc-------------------HHHHHhhhhh---cccccccccccHHHHHHHChhHHHHhcCcccCC
Confidence 222233333332222 2222211100 0011 1111125566666632235567899999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||||.++|||||+.+|++|||||||.||-|.-+..|.+.|+++ +.|||+|.++..++.+++||.++|++|+++
T Consensus 138 SGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv- 216 (237)
T COG0410 138 SGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIV- 216 (237)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEE-
Confidence 999999999999999999999999999999999999999988765 349999999999999999999999999996
Q ss_pred ecCChhhHHhh
Q 048654 398 YRGNFDDFESG 408 (723)
Q Consensus 398 ~~g~~~~~~~~ 408 (723)
+.|+.+++...
T Consensus 217 ~~G~~~eL~~~ 227 (237)
T COG0410 217 LSGTAAELLAD 227 (237)
T ss_pred EecCHHHHhcC
Confidence 56888776543
No 421
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-36 Score=310.95 Aligned_cols=209 Identities=22% Similarity=0.318 Sum_probs=162.1
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~-------- 559 (723)
.++|+++|+++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 4 ~~~i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 81 (253)
T PRK14261 4 EIILSTKNLNLWYGEK--HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGAD 81 (253)
T ss_pred cceEEEeeeEEEECCe--eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccc
Confidence 4689999999999753 589999999999999999999999999999999999763 4899987652
Q ss_pred -----eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|..... .++.++.. +................+.++++.+++... ...+++..|||||||||+|
T Consensus 82 ~~~~~~~i~~~~q~~~~~~~tv~eni~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14261 82 VVALRRKIGMVFQRPNPFPKSIYENVA-YGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCI 160 (253)
T ss_pred hhhhhceEEEEecCCccCcccHHHHHH-hhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHH
Confidence 2378998874211 12222221 111111100000123356678888887421 1246678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||+|+.+|+||||||||+|||+.++..+.++|.++. .|||++|||++++..+|| +|++|++|+++. .|++++
T Consensus 161 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d-----~v~~l~~G~i~~-~g~~~~ 234 (253)
T PRK14261 161 ARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSD-----YTGFMYLGKLIE-FDKTTQ 234 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCC-----EEEEEECCEEEE-cCCHHH
Confidence 999999999999999999999999999999998874 699999999999999985 999999999975 577776
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 235 ~~ 236 (253)
T PRK14261 235 IF 236 (253)
T ss_pred HH
Confidence 64
No 422
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-36 Score=313.78 Aligned_cols=207 Identities=23% Similarity=0.261 Sum_probs=162.2
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~-------- 559 (723)
.++|+++||++.|++. .+|+|+||+|.+|++++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 8 ~~~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 85 (264)
T PRK14243 8 ETVLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVD 85 (264)
T ss_pred ceEEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccC
Confidence 4689999999999753 58999999999999999999999999999999999986 47999987652
Q ss_pred -----eeEEEEccccccccCccccHHHHHHhhC-CCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVDLLTMEETPVSYLLRLH-PDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|+..- +. .+..+.+.... .........+.+..++..+++.. ....+++.+|||||||||+|
T Consensus 86 ~~~~~~~i~~v~q~~~~-~~--~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 86 PVEVRRRIGMVFQKPNP-FP--KSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred hHHHhhhEEEEccCCcc-cc--ccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHH
Confidence 247899987421 11 12222221100 00000112344566778877742 12345678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEE---------CCeE
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVE---------NGTV 699 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~---------~G~i 699 (723)
||||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| +|++|+ +|+|
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d-----~v~~l~~~~~~~~~~~g~i 237 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSD-----MTAFFNVELTEGGGRYGYL 237 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCC-----EEEEEecccccccccCceE
Confidence 999999999999999999999999999999998874 699999999999999995 999998 7999
Q ss_pred EecCCCHHHHH
Q 048654 700 SRFPGTFEEYK 710 (723)
Q Consensus 700 ~~~~g~~~~~~ 710 (723)
+. .|+++++.
T Consensus 238 ~~-~~~~~~~~ 247 (264)
T PRK14243 238 VE-FDRTEKIF 247 (264)
T ss_pred EE-eCCHHHHH
Confidence 74 57887764
No 423
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-36 Score=337.32 Aligned_cols=244 Identities=25% Similarity=0.327 Sum_probs=179.4
Q ss_pred HhhhhhcccccccccCccccccCCccccCCccceEEEeEEEEeCCe---eeeEeeeEEEeCCcEEEEECCCCccHHHHHH
Q 048654 133 EALRDDHDAFTVVIGSRTSVLEGQDDADANVKDITIDNFSVAARGK---ELLKSTSVRISHGKRYGLVGPNGMGKSTLLK 209 (723)
Q Consensus 133 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~l~nls~~y~~~---~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk 209 (723)
++++|-+|+.+.+..+ . ..........|+++||+|.|+.+ +||+|+||+|++||++|||||||+||||++.
T Consensus 439 ~rvFel~dr~P~i~~~-G-----~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTias 512 (716)
T KOG0058|consen 439 ERVFELMDRKPRIPLT-G-----TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIAS 512 (716)
T ss_pred HHHHHHhccCCCCCCC-C-----ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHH
Confidence 5788888888877555 2 11111234569999999999765 5999999999999999999999999999999
Q ss_pred HHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH--
Q 048654 210 LLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK-- 287 (723)
Q Consensus 210 ~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 287 (723)
+|..+|.| ..|+|.+.+.++...+ +..+++.++.+.+-... ..-.+.+++......
T Consensus 513 LL~rfY~P--tsG~IllDG~~i~~~~-------------~~~lr~~Ig~V~QEPvL-------Fs~sI~eNI~YG~~~~t 570 (716)
T KOG0058|consen 513 LLLRFYDP--TSGRILLDGVPISDIN-------------HKYLRRKIGLVGQEPVL-------FSGSIRENIAYGLDNAT 570 (716)
T ss_pred HHHHhcCC--CCCeEEECCeehhhcC-------------HHHHHHHeeeeecccee-------ecccHHHHHhcCCCCCC
Confidence 99988865 4556666665554322 22344555544332111 011112222111000
Q ss_pred HHhcCchHHHHHHHHHHHhC--CCCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh
Q 048654 288 LQILGSDAAEAQASKILAGL--GFTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR 365 (723)
Q Consensus 288 l~~~~~~~~~~~~~~~L~~l--gl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~ 365 (723)
...+......+.+++++..| |+.... +.+..+||||||||+||||||+++|.||||||.||+||.++...+++.|.+
T Consensus 571 ~e~i~~AAk~ANah~FI~~~p~gY~T~V-GEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~ 649 (716)
T KOG0058|consen 571 DEEIEAAAKMANAHEFITNFPDGYNTVV-GEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDR 649 (716)
T ss_pred HHHHHHHHHHhChHHHHHhCcccccccc-CCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHH
Confidence 00011123346678889888 776544 788899999999999999999999999999999999999999999999976
Q ss_pred c--CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChhhHHh
Q 048654 366 W--KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFDDFES 407 (723)
Q Consensus 366 ~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~~~~~ 407 (723)
. ++|||+|.|+++.+.+ ||+|+++++|+++. .|+++++.+
T Consensus 650 ~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~E-~G~h~eLl~ 691 (716)
T KOG0058|consen 650 LMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVVE-MGTHDELLS 691 (716)
T ss_pred hhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEEe-cccHHHHhh
Confidence 5 5899999999999997 99999999999975 588777643
No 424
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=312.98 Aligned_cols=223 Identities=22% Similarity=0.268 Sum_probs=162.9
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~ 238 (723)
+.++|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..+.+ ..|.|.+.++++......
T Consensus 17 ~~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~- 95 (274)
T PRK14265 17 DHSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN- 95 (274)
T ss_pred CCceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch-
Confidence 4457999999999998899999999999999999999999999999999999865433 467887776654321100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCC---ccccC
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFT---KEMQG 315 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~---~~~~~ 315 (723)
...++..++++.+.... . ...+.+++.... ..... .......+.++++.+++. ....+
T Consensus 96 ----------~~~~~~~i~~v~q~~~l------~-~~tv~~nl~~~~-~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~~ 156 (274)
T PRK14265 96 ----------SVKLRRQVGMVFQRPNP------F-PKSIYENIAFAP-RANGY-KGNLDELVEDSLRRAAIWEEVKDKLK 156 (274)
T ss_pred ----------hHHHhhcEEEEccCCcc------c-cccHHHHHHhHH-HhcCc-hHHHHHHHHHHHHHcccchhhHHHhc
Confidence 00112223333221111 0 011222222111 00001 112234566778888763 12346
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEe--
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLH-- 391 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~-- 391 (723)
+++.+|||||+|||+|||||+.+|+||||||||++||+.++.+|.++|.++ +.|||+||||++++..+||++++|+
T Consensus 157 ~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~ 236 (274)
T PRK14265 157 EKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTE 236 (274)
T ss_pred CCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecc
Confidence 889999999999999999999999999999999999999999999999876 4799999999999999999999997
Q ss_pred -------CCEEEEecCChhhH
Q 048654 392 -------DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 -------~G~i~~~~g~~~~~ 405 (723)
+|+++. .|+.+++
T Consensus 237 ~~~~~~~~G~~~~-~g~~~~~ 256 (274)
T PRK14265 237 IDEYGKRRGKLVE-FSPTEQM 256 (274)
T ss_pred cccccccCceEEE-eCCHHHH
Confidence 799974 4776665
No 425
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.7e-36 Score=344.45 Aligned_cols=207 Identities=27% Similarity=0.346 Sum_probs=164.2
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCC--CCCcceEEECC---------------
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDL--SPTEGEVRRSQ--------------- 558 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~--~p~~G~I~~~~--------------- 558 (723)
|+++|++++|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|++ +|++|+|.+.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 478999999975 35899999999999999999999999999999999997 79999998751
Q ss_pred -----------------------------ceeEEEEcccc---ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhC
Q 048654 559 -----------------------------KLRIGRYSQHF---VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKF 606 (723)
Q Consensus 559 -----------------------------~~~ig~~~q~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 606 (723)
+..++|++|.. ...+++.++... ...... ........++.++|+.+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~-~~~~~~-~~~~~~~~~~~~~l~~~ 156 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLE-ALEEIG-YEGKEAVGRAVDLIEMV 156 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHH-HHHHcC-CCHHHHHHHHHHHHHHc
Confidence 12378998862 122233333211 111111 10001234678899999
Q ss_pred CCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHh
Q 048654 607 GLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRV 682 (723)
Q Consensus 607 gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~ 682 (723)
||.... ++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+
T Consensus 157 gl~~~~-~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~ 235 (520)
T TIGR03269 157 QLSHRI-THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDL 235 (520)
T ss_pred CChhhh-hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHh
Confidence 997544 4677999999999999999999999999999999999999999999888775 35899999999999999
Q ss_pred cCcCCCcEEEEEECCeEEecCCCHHHHHHHH
Q 048654 683 CDDEERSEIWVVENGTVSRFPGTFEEYKEDL 713 (723)
Q Consensus 683 ~d~~~~drv~vl~~G~i~~~~g~~~~~~~~~ 713 (723)
|| +|++|++|+|+. .|+++++....
T Consensus 236 ~d-----~i~~l~~G~i~~-~g~~~~~~~~~ 260 (520)
T TIGR03269 236 SD-----KAIWLENGEIKE-EGTPDEVVAVF 260 (520)
T ss_pred cC-----EEEEEeCCEEee-ecCHHHHHHHH
Confidence 95 999999999974 68888776543
No 426
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=313.59 Aligned_cols=218 Identities=21% Similarity=0.323 Sum_probs=160.8
Q ss_pred cceEEEeEEEEeC--CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 164 KDITIDNFSVAAR--GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 164 ~~I~l~nls~~y~--~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
.+|+++|+++.|+ ++++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i~~~~~~~--- 80 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITISKENLKE--- 80 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEecCcCCHHH---
Confidence 4699999999995 56899999999999999999999999999999999998754 4566776665543211111
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
++..++++.+.... ......+.+++..... ...+.......++.++++.+|+.. ..++.+.+|
T Consensus 81 ----------~~~~i~~v~q~~~~-----~~~~~tv~enl~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 143 (271)
T PRK13632 81 ----------IRKKIGIIFQNPDN-----QFIGATVEDDIAFGLE-NKKVPPKKMKDIIDDLAKKVGMED-YLDKEPQNL 143 (271)
T ss_pred ----------HhcceEEEEeCHHH-----hcCcccHHHHHHhHHH-HcCCCHHHHHHHHHHHHHHcCCHH-HhhCCcccC
Confidence 11222222211000 0001122222221111 111223334567889999999974 457899999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
|||||||++|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+|||+++++. +||+|++|++|+++.
T Consensus 144 S~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~ 222 (271)
T PRK13632 144 SGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIA 222 (271)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999865 379999999999996 799999999999964
Q ss_pred ecCChhhH
Q 048654 398 YRGNFDDF 405 (723)
Q Consensus 398 ~~g~~~~~ 405 (723)
.|+.+++
T Consensus 223 -~g~~~~~ 229 (271)
T PRK13632 223 -QGKPKEI 229 (271)
T ss_pred -ecCHHHH
Confidence 4666554
No 427
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=8.6e-36 Score=308.39 Aligned_cols=201 Identities=33% Similarity=0.443 Sum_probs=154.0
Q ss_pred EEEEEEEEEcCCC-cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEE
Q 048654 496 LQLIEVSFSYPNR-EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIG 563 (723)
Q Consensus 496 l~~~~ls~~y~~~-~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig 563 (723)
|+++|+++.|++. ..++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999753 235899999999999999999999999999999999999999999998762 2488
Q ss_pred EEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHH---------HHHhC--CCCCCCCcCCCCCCCHHHHHHHHHHH
Q 048654 564 RYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRA---------KLGKF--GLPSHNHLTPIAKLSGGQKARVVFTS 632 (723)
Q Consensus 564 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~L~~~--gl~~~~~~~~i~~LSGGqkqRv~lAr 632 (723)
|++|...- + ..+....+ ....... ....+.. ++..+ ++.... .+++.+|||||||||+|||
T Consensus 81 ~~~q~~~~-~--~~tv~e~l-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~la~ 152 (238)
T cd03249 81 LVSQEPVL-F--DGTIAENI-RYGKPDA---TDEEVEEAAKKANIHDFIMSLPDGYDTLV-GERGSQLSGGQKQRIAIAR 152 (238)
T ss_pred EECCchhh-h--hhhHHHHh-hccCCCC---CHHHHHHHHHHcChHHHHHhhccccceee-ccCCccCCHHHHHHHHHHH
Confidence 99886421 1 11222222 1111110 1111222 22333 333222 3456899999999999999
Q ss_pred HHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 633 ISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 633 al~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
||+.+|++|||||||+|||+.++..+.+.|.++. .+||++|||++++. +|| +|++|++|+++ +.|+.+++.
T Consensus 153 al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~-~~d-----~v~~l~~G~i~-~~~~~~~~~ 225 (238)
T cd03249 153 ALLRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR-NAD-----LIAVLQNGQVV-EQGTHDELM 225 (238)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh-hCC-----EEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999999999998774 58999999999997 784 99999999997 457777765
Q ss_pred H
Q 048654 711 E 711 (723)
Q Consensus 711 ~ 711 (723)
.
T Consensus 226 ~ 226 (238)
T cd03249 226 A 226 (238)
T ss_pred h
Confidence 4
No 428
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-36 Score=291.61 Aligned_cols=218 Identities=27% Similarity=0.344 Sum_probs=163.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++..++.+|+++||++.+||+++|+||||||||||||.|+|... |+.|.+.+++..........
T Consensus 1 mi~a~nls~~~~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~~~~~~~------ 72 (259)
T COG4559 1 MIRAENLSYSLAGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLNSWPPEE------ 72 (259)
T ss_pred CeeeeeeEEEeecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChhhCCHHH------
Confidence 4889999999999999999999999999999999999999999999998765 45667777766554433222
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCch--HHHHHHHHHHHhCCCCccccCCCCCCCC
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSD--AAEAQASKILAGLGFTKEMQGRPTKSFS 322 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~L~~lgl~~~~~~~~~~~LS 322 (723)
+....+.+++.+...+ .+.+.+-+. +-..-...+.. +..+.++.+|...++. .+..|...+||
T Consensus 73 -------lA~~raVlpQ~s~laF------pFtv~eVV~-mGr~p~~~g~~~~e~~~i~~~ala~~d~~-~la~R~y~~LS 137 (259)
T COG4559 73 -------LARHRAVLPQNSSLAF------PFTVQEVVQ-MGRIPHRSGREPEEDERIAAQALAATDLS-GLAGRDYRTLS 137 (259)
T ss_pred -------HHHHhhhcccCccccc------ceEHHHHHH-hcccccccCCCchhhHHHHHHHHHHcChh-hhhccchhhcC
Confidence 2233344443322211 111111111 00000111222 4445578899999886 45679999999
Q ss_pred hHHHHHHHHHHHHcc------CCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCC
Q 048654 323 GGWRMRISLARALFV------QPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQ 393 (723)
Q Consensus 323 GGqrQRvaLArAL~~------~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G 393 (723)
|||||||.|||+|++ ++++|+|||||++||+..+..++++.+++ +..|+.|-||++.+..+||||++|++|
T Consensus 138 GGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~G 217 (259)
T COG4559 138 GGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQG 217 (259)
T ss_pred chHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCC
Confidence 999999999999976 44699999999999999999888887765 579999999999999999999999999
Q ss_pred EEEEecCChhhHH
Q 048654 394 KLHFYRGNFDDFE 406 (723)
Q Consensus 394 ~i~~~~g~~~~~~ 406 (723)
+++. .|.+.+..
T Consensus 218 rv~a-~g~p~~vl 229 (259)
T COG4559 218 RVIA-SGSPQDVL 229 (259)
T ss_pred eEee-cCCHHHhc
Confidence 9975 57776654
No 429
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-36 Score=343.12 Aligned_cols=200 Identities=26% Similarity=0.356 Sum_probs=161.1
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------ee
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LR 561 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ 561 (723)
++|+++|+++.|++. .+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|++++. ..
T Consensus 3 ~~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 3 PYLSFDGIGKTFPGV--KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred ceEEEeeeEEEECCE--EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 589999999999753 5899999999999999999999999999999999999999999988652 24
Q ss_pred EEEEccccc--cccCccccHHHHHHhh-CCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 562 IGRYSQHFV--DLLTMEETPVSYLLRL-HPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 562 ig~~~q~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
++|++|... ..+++.++........ +.........+.+.++|+.+||.... ++++.+|||||||||+|||||+.+|
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGq~qrv~laral~~~p 159 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDP-DTPLKYLSIGQRQMVEIAKALARNA 159 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCc-CCchhhCCHHHHHHHHHHHHHHhCC
Confidence 899999742 2223333221100000 00000001234577899999997544 4678999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
+||||||||+|||+.++..|.++|.++ +.|||+||||++++..+|| +|++|++|+|+.
T Consensus 160 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d-----~i~~l~~G~i~~ 220 (501)
T PRK11288 160 RVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCD-----AITVFKDGRYVA 220 (501)
T ss_pred CEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEe
Confidence 999999999999999999999999876 3689999999999999995 999999999974
No 430
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.8e-36 Score=309.75 Aligned_cols=187 Identities=30% Similarity=0.419 Sum_probs=147.5
Q ss_pred eeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce------eEEEEccccc--cccCccccHHHHHH
Q 048654 513 LSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL------RIGRYSQHFV--DLLTMEETPVSYLL 584 (723)
Q Consensus 513 L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~------~ig~~~q~~~--~~~~~~~~~~~~~~ 584 (723)
|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. ..+|++|... ..+++.++......
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999987642 2478888642 22333333221111
Q ss_pred hhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHH
Q 048654 585 RLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDE 664 (723)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~ 664 (723)
..............+..+++.+||.... ++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.+.|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~ 159 (230)
T TIGR01184 81 RVLPDLSKSERRAIVEEHIALVGLTEAA-DKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQ 159 (230)
T ss_pred hcccCCCHHHHHHHHHHHHHHcCCHHHH-cCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHH
Confidence 0111110001233577899999997544 467799999999999999999999999999999999999999999999987
Q ss_pred c----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 665 F----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 665 ~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
+ +.|||+||||++++..+|| +|++|++|+++. .|+.
T Consensus 160 ~~~~~~~tii~~sH~~~~~~~~~d-----~v~~l~~G~i~~-~~~~ 199 (230)
T TIGR01184 160 IWEEHRVTVLMVTHDVDEALLLSD-----RVVMLTNGPAAN-IGQI 199 (230)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhcC-----EEEEEeCCcEec-ccCc
Confidence 5 3589999999999999995 999999999974 3543
No 431
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=308.00 Aligned_cols=223 Identities=21% Similarity=0.299 Sum_probs=164.8
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCC--C-CCCcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKI--P-VPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~--~-~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
..|+++||++.|+++++|+|+||+|.+|++++|+|+|||||||||++|+|+.. + .+..|+|.+.++.+......
T Consensus 2 ~~l~~~~v~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~--- 78 (250)
T PRK14266 2 YRIEVENLNTYFDDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVD--- 78 (250)
T ss_pred cEEEEEeEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEccccccc---
Confidence 35899999999998899999999999999999999999999999999999753 2 13577888877665321100
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
...++..++++.+.... . ...+.+++.................++.++++.+|+.. ...+++
T Consensus 79 --------~~~~~~~i~~~~q~~~~------~-~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 143 (250)
T PRK14266 79 --------VVELRKKVGMVFQKPNP------F-PKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKS 143 (250)
T ss_pred --------HHHHhhheEEEecCCcc------C-cchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCC
Confidence 01122233333321110 0 11222222211111001111234567888999998742 234788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++|++
T Consensus 144 ~~~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i 223 (250)
T PRK14266 144 ALGLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEI 223 (250)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999999865 47999999999999999999999999999
Q ss_pred EEecCChhhH
Q 048654 396 HFYRGNFDDF 405 (723)
Q Consensus 396 ~~~~g~~~~~ 405 (723)
.. .|+.+++
T Consensus 224 ~~-~g~~~~~ 232 (250)
T PRK14266 224 IE-SGLTDQI 232 (250)
T ss_pred EE-eCCHHHH
Confidence 74 5776655
No 432
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.6e-36 Score=343.92 Aligned_cols=206 Identities=24% Similarity=0.358 Sum_probs=163.4
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC--CcceEEECCc------------e
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP--TEGEVRRSQK------------L 560 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p--~~G~I~~~~~------------~ 560 (723)
+|+++|+++.|++ ..+|+||||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++. .
T Consensus 1 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 1 LLEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred CEEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 5789999999975 3589999999999999999999999999999999999987 7999998762 2
Q ss_pred eEEEEccccc--cccCccccHHHHHHhhCCC--CCCC-cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHc
Q 048654 561 RIGRYSQHFV--DLLTMEETPVSYLLRLHPD--QEGL-SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISM 635 (723)
Q Consensus 561 ~ig~~~q~~~--~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~ 635 (723)
.++|++|... ..+++.++.. +....... .... .....+.++++.+++......+++.+|||||||||+|||||+
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~ 157 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIF-LGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKALN 157 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHH-hhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHHh
Confidence 4899999742 2233333321 10001000 0000 123457789999999755444678999999999999999999
Q ss_pred cCCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 636 SKPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 636 ~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|| +|++|++|+++. .++++++
T Consensus 158 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~ 228 (500)
T TIGR02633 158 KQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCD-----TICVIRDGQHVA-TKDMSTM 228 (500)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCC-----EEEEEeCCeEee-ecCcccC
Confidence 999999999999999999999999998876 3589999999999999995 999999999974 4555443
No 433
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=310.73 Aligned_cols=209 Identities=24% Similarity=0.296 Sum_probs=162.4
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----cceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPT-----EGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~-----~G~I~~~~~--------- 559 (723)
++|+++|+++.|++. .+|+|+||+|.+|++++|+|+||||||||+++|+|+++|+ +|+|.+++.
T Consensus 6 ~~l~~~nl~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDTQ--KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCCe--eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 479999999999753 4899999999999999999999999999999999999985 788876542
Q ss_pred ----eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ----~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|...- ..++.++.... ...............+..+++.+++.. ....+++.+|||||+|||+||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~la 162 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYG-VKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIA 162 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHH-HHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHH
Confidence 137888886321 12222222111 111100000012345677889998743 123467789999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEEC-----CeEEec
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVEN-----GTVSRF 702 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~-----G~i~~~ 702 (723)
|+|+.+|+||||||||+|||+.+...+.+.|+++ +.|||+||||++++..+|| +|++|++ |+++.
T Consensus 163 ral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d-----~i~~l~~~~~~~G~i~~- 236 (261)
T PRK14258 163 RALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSD-----FTAFFKGNENRIGQLVE- 236 (261)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcC-----EEEEEccCCCcCceEEE-
Confidence 9999999999999999999999999999999874 4689999999999999995 9999999 99974
Q ss_pred CCCHHHHHH
Q 048654 703 PGTFEEYKE 711 (723)
Q Consensus 703 ~g~~~~~~~ 711 (723)
.|+++++.+
T Consensus 237 ~~~~~~~~~ 245 (261)
T PRK14258 237 FGLTKKIFN 245 (261)
T ss_pred eCCHHHHHh
Confidence 588877643
No 434
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=305.20 Aligned_cols=214 Identities=27% Similarity=0.365 Sum_probs=160.0
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|.++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|++.| ..|.|.+.++.+......
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~~~~~-------- 70 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITNLPPH-------- 70 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChh--------
Confidence 4689999999999999999999999999999999999999999999998765 456676666554321110
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
...++++.+.... .....+.+++..... ...........++..+++.+|+.. ..++.+..|||||
T Consensus 71 -------~~~i~~~~q~~~~------~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~lS~G~ 135 (232)
T cd03300 71 -------KRPVNTVFQNYAL------FPHLTVFENIAFGLR-LKKLPKAEIKERVAEALDLVQLEG-YANRKPSQLSGGQ 135 (232)
T ss_pred -------hcceEEEeccccc------CCCCcHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCCHHH
Confidence 0111222111000 001122222221111 111122334567888999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
+|||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||++||+++++..+||+|++|++|++.. .|+
T Consensus 136 ~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~-~~~ 214 (232)
T cd03300 136 QQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQ-IGT 214 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEe-cCC
Confidence 99999999999999999999999999999999999998764 5799999999999999999999999999964 465
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
..++
T Consensus 215 ~~~~ 218 (232)
T cd03300 215 PEEI 218 (232)
T ss_pred HHHH
Confidence 5443
No 435
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=312.02 Aligned_cols=218 Identities=22% Similarity=0.275 Sum_probs=160.8
Q ss_pred cceEEEeEEEEeCC--eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 164 KDITIDNFSVAARG--KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 164 ~~I~l~nls~~y~~--~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
++|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+......
T Consensus 6 ~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~---- 79 (269)
T PRK13648 6 SIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAITDDNFE---- 79 (269)
T ss_pred ceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECCcCCHH----
Confidence 36999999999975 4699999999999999999999999999999999998654 456777766654322111
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
.++..++++.+.... ......+.+++..... ...........++.++++.+|+.+ ..++++.+|
T Consensus 80 ---------~~~~~i~~v~q~~~~-----~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 143 (269)
T PRK13648 80 ---------KLRKHIGIVFQNPDN-----QFVGSIVKYDVAFGLE-NHAVPYDEMHRRVSEALKQVDMLE-RADYEPNAL 143 (269)
T ss_pred ---------HHHhheeEEEeChHH-----hcccccHHHHHHhhHH-hcCCCHHHHHHHHHHHHHHcCCch-hhhCCcccC
Confidence 112223333221100 0000011122211111 011122334567889999999974 457899999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||||||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+|||+++++.. ||+|++|++|+++.
T Consensus 144 S~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~ 222 (269)
T PRK13648 144 SGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYK 222 (269)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999998764 5799999999999986 99999999999974
Q ss_pred ecCChhhH
Q 048654 398 YRGNFDDF 405 (723)
Q Consensus 398 ~~g~~~~~ 405 (723)
.|+.+++
T Consensus 223 -~g~~~~~ 229 (269)
T PRK13648 223 -EGTPTEI 229 (269)
T ss_pred -ecCHHHH
Confidence 5776554
No 436
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=311.11 Aligned_cols=208 Identities=24% Similarity=0.299 Sum_probs=162.6
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc---------
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK--------- 559 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~--------- 559 (723)
++|+++||++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 47999999999975 3589999999999999999999999999999999999985 4899987653
Q ss_pred ----eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHHHHHH
Q 048654 560 ----LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ----~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|...- ..++.++.... .............+.+.+++..+++.. ....+++.+|||||||||+||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 162 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYG-VRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIA 162 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHH
Confidence 148899987421 12333332111 111110000112345677888888842 223456789999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEE-----CCeEEecCC
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVE-----NGTVSRFPG 704 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~-----~G~i~~~~g 704 (723)
|||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|+ +|+++. .|
T Consensus 163 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d-----~i~~l~~~~~~~G~i~~-~~ 236 (259)
T PRK14260 163 RALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSD-----FTAFFSTDESRIGQMVE-FG 236 (259)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcC-----eEEEEeccCCCCceEEE-eC
Confidence 99999999999999999999999999999998874 699999999999999995 999997 599975 57
Q ss_pred CHHHHH
Q 048654 705 TFEEYK 710 (723)
Q Consensus 705 ~~~~~~ 710 (723)
+++++.
T Consensus 237 ~~~~~~ 242 (259)
T PRK14260 237 VTTQIF 242 (259)
T ss_pred CHHHHh
Confidence 887764
No 437
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-36 Score=307.23 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=157.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||+++|++.. .|+||+|.+|++++|+||||||||||+++|+|+..|. .|+|.+.+..+......
T Consensus 1 ~l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~--~G~i~~~g~~~~~~~~~------- 69 (232)
T PRK10771 1 MLKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA--SGSLTLNGQDHTTTPPS------- 69 (232)
T ss_pred CeEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC--CceEEECCeecCcCChh-------
Confidence 378999999998654 3999999999999999999999999999999987654 55666666544321110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
...++++.+.... .....+.+++...... ..........++.++++.+|+.. ..++++.+||||
T Consensus 70 --------~~~i~~~~q~~~~------~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G 133 (232)
T PRK10771 70 --------RRPVSMLFQENNL------FSHLTVAQNIGLGLNP-GLKLNAAQREKLHAIARQMGIED-LLARLPGQLSGG 133 (232)
T ss_pred --------hccEEEEeccccc------ccCCcHHHHHhccccc-ccCCCHHHHHHHHHHHHHcCcHH-HHhCCcccCCHH
Confidence 0111222111000 0011222222111000 00011234567889999999964 568999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|
T Consensus 134 ~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~-~~g 212 (232)
T PRK10771 134 QRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIA-WDG 212 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeC
Confidence 999999999999999999999999999999999999988754 579999999999999999999999999996 457
Q ss_pred ChhhHH
Q 048654 401 NFDDFE 406 (723)
Q Consensus 401 ~~~~~~ 406 (723)
+++++.
T Consensus 213 ~~~~~~ 218 (232)
T PRK10771 213 PTDELL 218 (232)
T ss_pred CHHHHH
Confidence 776654
No 438
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=310.20 Aligned_cols=221 Identities=23% Similarity=0.271 Sum_probs=161.5
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
.|+++|++++|+++.+|+|+||+|++|++++|+|+|||||||||++|+|+..+. +..|.|.+.++++.......
T Consensus 7 ~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~--- 83 (261)
T PRK14258 7 AIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL--- 83 (261)
T ss_pred eEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch---
Confidence 599999999999889999999999999999999999999999999999987643 12567777665542110000
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQIL-GSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
..++..++++.+.... . ...+.+++.... ..... ......+++.++++.+++.. ...+++
T Consensus 84 --------~~~~~~i~~~~q~~~l------~-~~tv~enl~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 147 (261)
T PRK14258 84 --------NRLRRQVSMVHPKPNL------F-PMSVYDNVAYGV-KIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKS 147 (261)
T ss_pred --------HHhhccEEEEecCCcc------C-cccHHHHHHHHH-HhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCC
Confidence 0111222222211100 0 112222222111 11111 11233456788999998742 234788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeC-
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHD- 392 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~- 392 (723)
+.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++
T Consensus 148 ~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~ 227 (261)
T PRK14258 148 ALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGN 227 (261)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccC
Confidence 9999999999999999999999999999999999999999999988752 67999999999999999999999999
Q ss_pred ----CEEEEecCChhhH
Q 048654 393 ----QKLHFYRGNFDDF 405 (723)
Q Consensus 393 ----G~i~~~~g~~~~~ 405 (723)
|+++ +.|+.+++
T Consensus 228 ~~~~G~i~-~~~~~~~~ 243 (261)
T PRK14258 228 ENRIGQLV-EFGLTKKI 243 (261)
T ss_pred CCcCceEE-EeCCHHHH
Confidence 9986 45776655
No 439
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=9e-36 Score=306.88 Aligned_cols=191 Identities=28% Similarity=0.431 Sum_probs=152.2
Q ss_pred ceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC----CcceEEECCc---------eeEEEEccccc----cccC
Q 048654 512 KLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP----TEGEVRRSQK---------LRIGRYSQHFV----DLLT 574 (723)
Q Consensus 512 ~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p----~~G~I~~~~~---------~~ig~~~q~~~----~~~~ 574 (723)
+|+||||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++. ..++|++|... ..++
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 47899999999999999999999999999999999999 8999998763 25899998752 1122
Q ss_pred ccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC--CCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCH
Q 048654 575 MEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS--HNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDM 652 (723)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~--~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~ 652 (723)
+.++.... ....... .......+.++++.+++.. ....+++.+|||||||||+|||||+.+|+||||||||+|||+
T Consensus 81 ~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~ 158 (230)
T TIGR02770 81 MGNHAIET-LRSLGKL-SKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDV 158 (230)
T ss_pred HHHHHHHH-HHHcCcc-HHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCH
Confidence 22221111 1111110 0112345788999999973 233467899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH
Q 048654 653 QSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK 710 (723)
Q Consensus 653 ~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~ 710 (723)
.++..+.+.|.++ +.|||+||||++++..+|| +|++|++|++.. .|+++++.
T Consensus 159 ~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~~ 214 (230)
T TIGR02770 159 VNQARVLKLLRELRQLFGTGILLITHDLGVVARIAD-----EVAVMDDGRIVE-RGTVKEIF 214 (230)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCHHHHH
Confidence 9999999999875 3589999999999999995 999999999974 57887764
No 440
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.9e-36 Score=304.42 Aligned_cols=193 Identities=26% Similarity=0.325 Sum_probs=152.9
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++....+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (221)
T cd03244 3 IEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISI 82 (221)
T ss_pred EEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEE
Confidence 6899999999753346899999999999999999999999999999999999999999988763 24889
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCC----------CcCCCCCCCHHHHHHHHHHHHH
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHN----------HLTPIAKLSGGQKARVVFTSIS 634 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~----------~~~~i~~LSGGqkqRv~lAral 634 (723)
++|... .+ ..+..+.+ ..+.. . ....+...++.+++.... ...++..|||||+|||+|||+|
T Consensus 83 ~~q~~~-l~--~~tv~enl-~~~~~---~-~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral 154 (221)
T cd03244 83 IPQDPV-LF--SGTIRSNL-DPFGE---Y-SDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARAL 154 (221)
T ss_pred ECCCCc-cc--cchHHHHh-CcCCC---C-CHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHH
Confidence 998743 11 12333322 11111 1 123444555555553221 1246789999999999999999
Q ss_pred ccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEec
Q 048654 635 MSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRF 702 (723)
Q Consensus 635 ~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~ 702 (723)
+.+|++|||||||++||+.++..+.++|+++. .|||++|||.+++.. | |++++|++|+++..
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~-----d~i~~l~~g~~~~~ 218 (221)
T cd03244 155 LRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-S-----DRILVLDKGRVVEF 218 (221)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-C-----CEEEEEECCeEEec
Confidence 99999999999999999999999999999864 689999999999975 7 49999999999743
No 441
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=311.10 Aligned_cols=221 Identities=19% Similarity=0.254 Sum_probs=161.1
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC---CCcEEEEEeeeeecCCChHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV---PKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~---~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
++|+++||+++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..+. +..|.|.+.+..+.......
T Consensus 9 ~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~-- 86 (264)
T PRK14243 9 TVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP-- 86 (264)
T ss_pred eEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh--
Confidence 4699999999999889999999999999999999999999999999999986432 35678877666543111000
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCc---cccCCC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTK---EMQGRP 317 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~ 317 (723)
..++..++++.+.... . ...+.+++..... .... ......++..+++.+++.. ...+++
T Consensus 87 ---------~~~~~~i~~v~q~~~~------~-~~tv~enl~~~~~-~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 148 (264)
T PRK14243 87 ---------VEVRRRIGMVFQKPNP------F-PKSIYDNIAYGAR-INGY-KGDMDELVERSLRQAALWDEVKDKLKQS 148 (264)
T ss_pred ---------HHHhhhEEEEccCCcc------c-cccHHHHHHhhhh-hcCc-chHHHHHHHHHHHHhCchhhHHHHhcCC
Confidence 0112223333221100 0 0122222221111 0011 1123355667788887732 234688
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEe----
Q 048654 318 TKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLH---- 391 (723)
Q Consensus 318 ~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~---- 391 (723)
+.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|.++ +.|||+|||+++++..+||+|++|+
T Consensus 149 ~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 149 GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELT 228 (264)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccc
Confidence 9999999999999999999999999999999999999999999999876 4699999999999999999999998
Q ss_pred -----CCEEEEecCChhhH
Q 048654 392 -----DQKLHFYRGNFDDF 405 (723)
Q Consensus 392 -----~G~i~~~~g~~~~~ 405 (723)
+|+++. .|+..++
T Consensus 229 ~~~~~~g~i~~-~~~~~~~ 246 (264)
T PRK14243 229 EGGGRYGYLVE-FDRTEKI 246 (264)
T ss_pred cccccCceEEE-eCCHHHH
Confidence 799864 4776655
No 442
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.2e-35 Score=310.50 Aligned_cols=217 Identities=20% Similarity=0.280 Sum_probs=159.3
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCC--CCcEEEEEeeeeecCCChHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPV--PKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~--~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
.|+++|++++| ++++|+|+||+|.+|++++|+|+||||||||+++|+|+..|. +..|+|.+.+..+... ..
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~---- 76 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--AL---- 76 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cc----
Confidence 58999999999 678999999999999999999999999999999999987651 1556777666544210 00
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcc--ccCCCCCC
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKE--MQGRPTKS 320 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~--~~~~~~~~ 320 (723)
....++++.+..... . .....+....... +...+......++.++++.+|+... ..++++.+
T Consensus 77 ---------~~~~i~~v~q~~~~~--~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 140 (254)
T PRK10418 77 ---------RGRKIATIMQNPRSA--F--NPLHTMHTHARET---CLALGKPADDATLTAALEAVGLENAARVLKLYPFE 140 (254)
T ss_pred ---------ccceEEEEecCCccc--c--CccccHHHHHHHH---HHHcCCChHHHHHHHHHHHcCCCChhhhhhcCCcc
Confidence 001122222211000 0 0001111111111 1111222234678899999999642 34788999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
|||||+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+|||+++++..+||+|++|++|+++
T Consensus 141 LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~ 220 (254)
T PRK10418 141 MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIV 220 (254)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999988754 579999999999999999999999999996
Q ss_pred EecCChhhH
Q 048654 397 FYRGNFDDF 405 (723)
Q Consensus 397 ~~~g~~~~~ 405 (723)
..|+.+++
T Consensus 221 -~~~~~~~~ 228 (254)
T PRK10418 221 -EQGDVETL 228 (254)
T ss_pred -EecCHHHH
Confidence 45776555
No 443
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=8.6e-36 Score=305.85 Aligned_cols=197 Identities=25% Similarity=0.267 Sum_probs=152.0
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
+.++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+....
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~---------- 90 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPP--DSGTVTVRGRVSSLLG---------- 90 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEchhhc----------
Confidence 7889999999999999999999999999999999999999999999998654 4566666554321000
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
....+.. ...+.+++..... ...........++.++++.+|+.+ ..++++.+|||||
T Consensus 91 --------~~~~~~~-------------~~tv~enl~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~ 147 (224)
T cd03220 91 --------LGGGFNP-------------ELTGRENIYLNGR-LLGLSRKEIDEKIDEIIEFSELGD-FIDLPVKTYSSGM 147 (224)
T ss_pred --------ccccCCC-------------CCcHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHH
Confidence 0000000 0111222211111 111122333456788899999964 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+|||||+.+|++|||||||++||+.++..+.++|.++ +.|||+|||+++++..+||+|++|++|+++.
T Consensus 148 ~qrv~laral~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 222 (224)
T cd03220 148 KARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRF 222 (224)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999988764 5799999999999999999999999999863
No 444
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=9.7e-36 Score=290.58 Aligned_cols=158 Identities=27% Similarity=0.428 Sum_probs=131.6
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccccCc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTM 575 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~~~~ 575 (723)
|+++|+++.|++. ++|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.. +.. .
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~-~~~--------~-- 67 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKE-VSF--------A-- 67 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEE-CCc--------C--
Confidence 4689999999753 58999999999999999999999999999999999999999999887641 100 0
Q ss_pred cccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHH
Q 048654 576 EETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSI 655 (723)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~ 655 (723)
..... .+ ..+++ +.+|||||+|||+|||||+.+|++|||||||++||+.++
T Consensus 68 --~~~~~----------------~~---~~i~~--------~~qLS~G~~qrl~laral~~~p~illlDEP~~~LD~~~~ 118 (163)
T cd03216 68 --SPRDA----------------RR---AGIAM--------VYQLSVGERQMVEIARALARNARLLILDEPTAALTPAEV 118 (163)
T ss_pred --CHHHH----------------Hh---cCeEE--------EEecCHHHHHHHHHHHHHhcCCCEEEEECCCcCCCHHHH
Confidence 00000 00 00111 112999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEE
Q 048654 656 DALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVS 700 (723)
Q Consensus 656 ~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~ 700 (723)
+.+.++|+++ +.|||++|||++++..+|| ++++|++|+++
T Consensus 119 ~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d-----~~~~l~~g~i~ 161 (163)
T cd03216 119 ERLFKVIRRLRAQGVAVIFISHRLDEVFEIAD-----RVTVLRDGRVV 161 (163)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEE
Confidence 9999999887 3689999999999999995 99999999986
No 445
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.1e-35 Score=291.11 Aligned_cols=164 Identities=29% Similarity=0.378 Sum_probs=139.5
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccccCc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTM 575 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~~~~ 575 (723)
|+++|+++.|++. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+...++|++|... +.
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~--~~- 76 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPY--LP- 76 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCc--cc-
Confidence 4689999999643 3589999999999999999999999999999999999999999999988778999999742 11
Q ss_pred cccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHH
Q 048654 576 EETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSI 655 (723)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~ 655 (723)
..+..+.+ .. + ++.+|||||||||+|||||+.+|++|||||||+|||+.++
T Consensus 77 ~~tv~~nl--------------------~~-~--------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~ 127 (166)
T cd03223 77 LGTLREQL--------------------IY-P--------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESE 127 (166)
T ss_pred cccHHHHh--------------------hc-c--------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHH
Confidence 11211111 00 0 2478999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCe
Q 048654 656 DALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGT 698 (723)
Q Consensus 656 ~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~ 698 (723)
..+.++|.+++.|||+||||.+++ .+|| ++++|+++.
T Consensus 128 ~~l~~~l~~~~~tiiivsh~~~~~-~~~d-----~i~~l~~~~ 164 (166)
T cd03223 128 DRLYQLLKELGITVISVGHRPSLW-KFHD-----RVLDLDGEG 164 (166)
T ss_pred HHHHHHHHHhCCEEEEEeCChhHH-hhCC-----EEEEEcCCC
Confidence 999999999988999999999876 5784 999998763
No 446
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.8e-36 Score=306.19 Aligned_cols=195 Identities=31% Similarity=0.376 Sum_probs=153.6
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEcc--cccccc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQ--HFVDLL 573 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q--~~~~~~ 573 (723)
+.++++++.|++. ++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|++++.. +.+..+ .+...+
T Consensus 23 l~~~~~~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~-~~~~~~~~~~~~~~ 99 (224)
T cd03220 23 LGILGRKGEVGEF--WALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRV-SSLLGLGGGFNPEL 99 (224)
T ss_pred hhhhhhhhhcCCe--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE-chhhcccccCCCCC
Confidence 7789999999863 58999999999999999999999999999999999999999999988753 111111 111223
Q ss_pred CccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHH
Q 048654 574 TMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQ 653 (723)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~ 653 (723)
++.++.... ...+. .........+..+++.+++.... .+++.+|||||||||+|||||+.+|++|||||||+|||+.
T Consensus 100 tv~enl~~~-~~~~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~ 176 (224)
T cd03220 100 TGRENIYLN-GRLLG-LSRKEIDEKIDEIIEFSELGDFI-DLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAA 176 (224)
T ss_pred cHHHHHHHH-HHHcC-CCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 333332111 11111 00001223567788999997544 4678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 654 SIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 654 s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
++..+.++|.++ +.|||+||||++++..+|| ++++|++|+++.
T Consensus 177 ~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d-----~i~~l~~G~i~~ 222 (224)
T cd03220 177 FQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCD-----RALVLEKGKIRF 222 (224)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEe
Confidence 999999999876 3689999999999999995 999999999964
No 447
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=100.00 E-value=8.9e-36 Score=284.90 Aligned_cols=144 Identities=46% Similarity=0.815 Sum_probs=135.3
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEccccccccCc
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTM 575 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~~~~~~~ 575 (723)
|+++|+++.|++. .+|+++||++++||+++|+||||||||||+++|+|+++|++|+|++++...++|++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~~~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~~~~~i~~~~~-------- 70 (144)
T cd03221 1 IELENLSKTYGGK--LLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGSTVKIGYFEQ-------- 70 (144)
T ss_pred CEEEEEEEEECCc--eEEEeeEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCeEEEEEEcc--------
Confidence 4689999999753 589999999999999999999999999999999999999999999988767777776
Q ss_pred cccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHH
Q 048654 576 EETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSI 655 (723)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~ 655 (723)
||+||+|||+|||||+.+|++|||||||++||+.++
T Consensus 71 --------------------------------------------lS~G~~~rv~laral~~~p~illlDEP~~~LD~~~~ 106 (144)
T cd03221 71 --------------------------------------------LSGGEKMRLALAKLLLENPNLLLLDEPTNHLDLESI 106 (144)
T ss_pred --------------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHH
Confidence 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCceEEEEecCHHHHHHhcCcCCCcEEEEEECCe
Q 048654 656 DALADALDEFTGGVVLVSHDSRLISRVCDDEERSEIWVVENGT 698 (723)
Q Consensus 656 ~~l~~~L~~~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~ 698 (723)
..+.+.|++++.|||+|||+.+++..+|| ++++|++|+
T Consensus 107 ~~l~~~l~~~~~til~~th~~~~~~~~~d-----~v~~l~~g~ 144 (144)
T cd03221 107 EALEEALKEYPGTVILVSHDRYFLDQVAT-----KIIELEDGK 144 (144)
T ss_pred HHHHHHHHHcCCEEEEEECCHHHHHHhCC-----EEEEEeCCC
Confidence 99999999998899999999999999995 999999985
No 448
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=6.7e-36 Score=302.30 Aligned_cols=186 Identities=30% Similarity=0.442 Sum_probs=147.5
Q ss_pred EEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce---------------eE
Q 048654 498 LIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL---------------RI 562 (723)
Q Consensus 498 ~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~---------------~i 562 (723)
++||++.|+++ .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. .+
T Consensus 1 i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGDK--IILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECCE--EEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 46899999753 58999999999999999999999999999999999999999999876532 47
Q ss_pred EEEccccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCe
Q 048654 563 GRYSQHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHI 640 (723)
Q Consensus 563 g~~~q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~l 640 (723)
+|++|... ...++.++.. +..... ........+.+.++++.+|+.... ++++.+|||||+||++|||||+.+|++
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~-~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~lS~G~~qr~~laral~~~p~l 155 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLD-LGLKYK-KLSKKEKREKKKEALEKVGLNLKL-KQKIYELSGGEQQRVALARAILKDPPL 155 (206)
T ss_pred eEEecchhhccCCcHHHHHH-HHHHhc-CCCHHHHHHHHHHHHHHcCchhhh-cCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 88888642 2233333321 111111 110111235678899999997544 467789999999999999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEE
Q 048654 641 LLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVV 694 (723)
Q Consensus 641 LlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl 694 (723)
|||||||+|||+.++..+.++|+++ +.|||+||||++++ .+|| ++++|
T Consensus 156 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d-----~i~~l 206 (206)
T TIGR03608 156 ILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQAD-----RVIEL 206 (206)
T ss_pred EEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcC-----EEEeC
Confidence 9999999999999999999999886 36899999999976 5784 88875
No 449
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.2e-35 Score=305.19 Aligned_cols=200 Identities=27% Similarity=0.395 Sum_probs=158.1
Q ss_pred eEEEEEEEEEcCCC--cccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC---CCcceEEECCc--------ee
Q 048654 495 LLQLIEVSFSYPNR--EDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS---PTEGEVRRSQK--------LR 561 (723)
Q Consensus 495 ~l~~~~ls~~y~~~--~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~---p~~G~I~~~~~--------~~ 561 (723)
++.++||++.|++. ...+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+.+. ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 56789999999764 2568999999999999999999999999999999999999 99999998763 35
Q ss_pred EEEEcccc--ccccCccccHHHHHHhhC-CCC-CCCcHHHHHHH-HHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHcc
Q 048654 562 IGRYSQHF--VDLLTMEETPVSYLLRLH-PDQ-EGLSKQEAVRA-KLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMS 636 (723)
Q Consensus 562 ig~~~q~~--~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~-~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~ 636 (723)
++|++|.. ...+++.++.. +..... ... ........+.. +|..+++.... .+.+..|||||+|||+|||+|+.
T Consensus 83 i~~~~q~~~~~~~~tv~enl~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLT-YTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIG-GNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHH-HHHHhhcccccchHHHHHHHHHHHHHhhcchhhh-cccccCcCHHHHHHHHHHHHHHh
Confidence 89999863 22234434322 111111 110 00001123444 78889987543 45679999999999999999999
Q ss_pred CCCeEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCH-HHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 637 KPHILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDS-RLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 637 ~p~lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~-~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
+|+||||||||+|||+.++..+.++|.++ +.|||++||+. +.+..+|| +|++|++|+++.
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d-----~i~~l~~G~i~~ 224 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFD-----RILLLSSGEIVY 224 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCC-----EEEEEeCCEEEe
Confidence 99999999999999999999999999876 35999999998 68888985 999999999974
No 450
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=309.79 Aligned_cols=226 Identities=22% Similarity=0.288 Sum_probs=162.8
Q ss_pred CccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCC---CcEEEEEeeeeecCCChHH
Q 048654 162 NVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVP---KNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~---~~~~i~~~~q~~~~~~~~~ 238 (723)
+...|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..|.| .+|+|.+.++.+.......
T Consensus 13 ~~~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~ 92 (265)
T PRK14252 13 TQQKSEVNKLNFYYGGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEV 92 (265)
T ss_pred CCceEEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccccc
Confidence 3456999999999998899999999999999999999999999999999999876544 4677777654432100000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHhCCCCc---ccc
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGS-DAAEAQASKILAGLGFTK---EMQ 314 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~L~~lgl~~---~~~ 314 (723)
....++..++++.+.... . ...+.+++..... ...... ...++++..+++.+++.. ...
T Consensus 93 ---------~~~~~~~~i~~~~q~~~~------~-~~tv~eni~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~ 155 (265)
T PRK14252 93 ---------DPIEVRMRISMVFQKPNP------F-PKSIFENVAYGLR-IRGVKRRSILEERVENALRNAALWDEVKDRL 155 (265)
T ss_pred ---------CHHHHhccEEEEccCCcC------C-cchHHHHHHhHHH-HcCCChHHHHHHHHHHHHHHcCCchhhhHHH
Confidence 000112223333221110 0 1122222221111 111111 122456778888887631 234
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
++.+.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|++|++
T Consensus 156 ~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~ 235 (265)
T PRK14252 156 GDLAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYM 235 (265)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 6888999999999999999999999999999999999999999999999876 46999999999999999999999999
Q ss_pred CEEEEecCChhhH
Q 048654 393 QKLHFYRGNFDDF 405 (723)
Q Consensus 393 G~i~~~~g~~~~~ 405 (723)
|+++.+ |+.+++
T Consensus 236 G~i~~~-g~~~~~ 247 (265)
T PRK14252 236 GELIEF-GATDTI 247 (265)
T ss_pred CEEEEe-CCHHHH
Confidence 999754 665544
No 451
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=318.25 Aligned_cols=211 Identities=25% Similarity=0.332 Sum_probs=164.6
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
...+|+++|++++|.+...++|+||||+|.+|+++||+||||||||||+++|+|+.+ |++|+|.+++.
T Consensus 77 ~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~ 156 (329)
T PRK14257 77 HANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKI 156 (329)
T ss_pred cCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 346899999999996433468999999999999999999999999999999999986 57999987543
Q ss_pred ------eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCc-HHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHH
Q 048654 560 ------LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLS-KQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARV 628 (723)
Q Consensus 560 ------~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv 628 (723)
..++|++|.+.. ..++.++.. +..... ...... ..+.+..+++.++|... ....++..|||||||||
T Consensus 157 ~~~~lr~~i~~v~q~~~~~~~ti~eNi~-~~~~~~-~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl 234 (329)
T PRK14257 157 SSLELRTRIGMVFQKPTPFEMSIFDNVA-YGPRNN-GINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRL 234 (329)
T ss_pred chHhhhccEEEEecCCccCCCcHHHHHH-hHHHhc-CCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHH
Confidence 248999997432 122333321 111111 000000 11235678888887421 12356789999999999
Q ss_pred HHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCH
Q 048654 629 VFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTF 706 (723)
Q Consensus 629 ~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~ 706 (723)
+|||||+.+|+||||||||++||+.+...+.+.|+++. .|||+|||+++++.++|| ||++|++|+|++ .|++
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~D-----riivl~~G~i~e-~g~~ 308 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISD-----ETVFFYQGWIEE-AGET 308 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC-----EEEEEECCEEEE-eCCH
Confidence 99999999999999999999999999999999998874 699999999999999995 999999999986 4888
Q ss_pred HHHH
Q 048654 707 EEYK 710 (723)
Q Consensus 707 ~~~~ 710 (723)
+++.
T Consensus 309 ~~l~ 312 (329)
T PRK14257 309 KTIF 312 (329)
T ss_pred HHHh
Confidence 8864
No 452
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=8.3e-36 Score=296.23 Aligned_cols=165 Identities=26% Similarity=0.418 Sum_probs=135.3
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------e
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------L 560 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~ 560 (723)
.++|+++|+++.| +|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 2 ~~~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (182)
T cd03215 2 EPVLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRA 75 (182)
T ss_pred CcEEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhC
Confidence 4589999999998 699999999999999999999999999999999999999999988763 1
Q ss_pred eEEEEccccc-cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCC
Q 048654 561 RIGRYSQHFV-DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPH 639 (723)
Q Consensus 561 ~ig~~~q~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~ 639 (723)
.++|++|... ..+....+.. +.+.... .|||||||||+|||||+.+|+
T Consensus 76 ~i~~~~q~~~~~~~~~~~t~~--------------------e~l~~~~-----------~LS~G~~qrl~la~al~~~p~ 124 (182)
T cd03215 76 GIAYVPEDRKREGLVLDLSVA--------------------ENIALSS-----------LLSGGNQQKVVLARWLARDPR 124 (182)
T ss_pred CeEEecCCcccCcccCCCcHH--------------------HHHHHHh-----------hcCHHHHHHHHHHHHHccCCC
Confidence 3666666521 0010001111 1111000 099999999999999999999
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 640 ILLLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 640 lLlLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
||||||||++||+.++..+.++|.++ +.|||++|||++++..+|| ++++|++|++
T Consensus 125 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d-----~v~~l~~G~i 182 (182)
T cd03215 125 VLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCD-----RILVMYEGRI 182 (182)
T ss_pred EEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCC-----EEEEecCCcC
Confidence 99999999999999999999999887 3699999999999999995 9999999974
No 453
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.3e-35 Score=304.80 Aligned_cols=197 Identities=26% Similarity=0.417 Sum_probs=154.9
Q ss_pred CCCeEEEEEEEEEcCCCc-ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------
Q 048654 492 TPPLLQLIEVSFSYPNRE-DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~-~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------- 559 (723)
..++|+++|+++.|+++. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 357899999999997532 35899999999999999999999999999999999999999999998763
Q ss_pred eeEEEEccccccccCccccHHHHHHhhCCCCCCCcH-H-----HHHHHHHHhC--CCCCCCCcCCCCCCCHHHHHHHHHH
Q 048654 560 LRIGRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSK-Q-----EAVRAKLGKF--GLPSHNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 ~~ig~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~L~~~--gl~~~~~~~~i~~LSGGqkqRv~lA 631 (723)
..++|++|...- + ..++...+...... ..... . ..+..+++.+ |+.... ..++.+|||||||||+||
T Consensus 88 ~~i~~~~q~~~l-~--~~tv~~nl~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~-~~~~~~LSgG~~qrv~la 162 (226)
T cd03248 88 SKVSLVGQEPVL-F--ARSLQDNIAYGLQS-CSFECVKEAAQKAHAHSFISELASGYDTEV-GEKGSQLSGGQKQRVAIA 162 (226)
T ss_pred hhEEEEecccHH-H--hhhHHHHhccccCC-CCHHHHHHHHHHcCcHHHHHhccccccchh-hcCCCcCCHHHHHHHHHH
Confidence 248899987421 1 12222222111110 00000 0 1145677888 776544 456799999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
|+|+.+|++|||||||+|||+.++..+.++|+++. .|||+||||++++. .| |+|++|++|++
T Consensus 163 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~-----d~i~~l~~g~i 226 (226)
T cd03248 163 RALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVE-RA-----DQILVLDGGRI 226 (226)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHH-hC-----CEEEEecCCcC
Confidence 99999999999999999999999999999998874 58999999999996 48 49999999874
No 454
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.5e-35 Score=299.12 Aligned_cols=185 Identities=28% Similarity=0.393 Sum_probs=150.5
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce----------eEEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL----------RIGRY 565 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~----------~ig~~ 565 (723)
|+++||++.|++. .+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.. .++|+
T Consensus 1 l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 78 (201)
T cd03231 1 LEADELTCERDGR--ALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYL 78 (201)
T ss_pred CEEEEEEEEeCCc--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEe
Confidence 4689999999753 58999999999999999999999999999999999999999999876532 47888
Q ss_pred ccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 566 SQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 566 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
+|... +....+....+...... ...+.+.++++.+++.... ++++.+|||||||||+|||||+.+|++|||||
T Consensus 79 ~q~~~--~~~~~tv~e~l~~~~~~----~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDE 151 (201)
T cd03231 79 GHAPG--IKTTLSVLENLRFWHAD----HSDEQVEEALARVGLNGFE-DRPVAQLSAGQQRRVALARLLLSGRPLWILDE 151 (201)
T ss_pred ccccc--cCCCcCHHHHHHhhccc----ccHHHHHHHHHHcCChhhh-cCchhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 87632 11112222222111111 1345678899999997544 46789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEE
Q 048654 646 PTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVV 694 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl 694 (723)
||+|||+.+++.+.++|.++ +.|||+||||...+..+| ++++++
T Consensus 152 Pt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~-----~~~~~~ 198 (201)
T cd03231 152 PTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAG-----ARELDL 198 (201)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhcc-----ceeEec
Confidence 99999999999999999876 468999999999998888 488876
No 455
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=301.30 Aligned_cols=207 Identities=24% Similarity=0.327 Sum_probs=151.7
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
+.+ ||+++|+++.+ |+||+|++ ++++|+||||||||||+++|+|+..| ..|+|.+.+.++.......
T Consensus 2 ~~~-~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~------- 68 (214)
T cd03297 2 LCV-DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKI------- 68 (214)
T ss_pred cee-eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchh-------
Confidence 345 89999999876 99999999 99999999999999999999998754 4566766665442111000
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
....++..++++.+.... .....+.+++.... ..........++.++++.+|+.. ..++++.+|||||
T Consensus 69 --~~~~~~~~i~~~~q~~~~------~~~~t~~~~l~~~~---~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 136 (214)
T cd03297 69 --NLPPQQRKIGLVFQQYAL------FPHLNVRENLAFGL---KRKRNREDRISVDELLDLLGLDH-LLNRYPAQLSGGE 136 (214)
T ss_pred --hhhhHhhcEEEEecCCcc------CCCCCHHHHHHHHH---hhCCHHHHHHHHHHHHHHcCCHh-HhhcCcccCCHHH
Confidence 000112223333221111 01112222222111 11112234567889999999974 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
|||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++.
T Consensus 137 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 212 (214)
T cd03297 137 KQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQY 212 (214)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999998764 5799999999999999999999999999863
No 456
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.8e-35 Score=311.77 Aligned_cols=199 Identities=25% Similarity=0.368 Sum_probs=160.5
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++....+|+||||+|.+||+++|+|+||||||||+++|+|+++ ++|+|++++. ..++|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 78999999996433468999999999999999999999999999999999998 7899998773 25899
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCC-----------CCHHHHHHHHHHHH
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAK-----------LSGGQKARVVFTSI 633 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~-----------LSGGqkqRv~lAra 633 (723)
++|.+.- + ..+....+ ..+.. ...+.+.++++.+||..... +.+.. |||||||||+||||
T Consensus 82 v~q~~~l-f--~~tv~~nl-~~~~~----~~~~~~~~~l~~~gL~~~~~-~~p~~l~~~~~~~g~~LS~G~~qrl~LaRa 152 (275)
T cd03289 82 IPQKVFI-F--SGTFRKNL-DPYGK----WSDEEIWKVAEEVGLKSVIE-QFPGQLDFVLVDGGCVLSHGHKQLMCLARS 152 (275)
T ss_pred ECCCccc-c--hhhHHHHh-hhccC----CCHHHHHHHHHHcCCHHHHH-hCcccccceecCCCCCCCHHHHHHHHHHHH
Confidence 9997531 1 12322222 11111 12356778888899865433 33344 99999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+.+|+||||||||++||+.+...+.+.|.+.. .|||+||||++++.. | |||++|++|+|+.+ |+++++..
T Consensus 153 ll~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~-----dri~vl~~G~i~~~-g~~~~l~~ 225 (275)
T cd03289 153 VLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-C-----QRFLVIEENKVRQY-DSIQKLLN 225 (275)
T ss_pred HhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-C-----CEEEEecCCeEeec-CCHHHHhh
Confidence 999999999999999999999999999998753 699999999999874 7 49999999999864 88887654
No 457
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=308.49 Aligned_cols=210 Identities=23% Similarity=0.294 Sum_probs=162.2
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~------- 559 (723)
..++|+++|+++.|++. .+|+|+||+|.+||+++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 13 ~~~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 13 TQQKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CCceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 35689999999999753 589999999999999999999999999999999999975 7999987541
Q ss_pred --------eeEEEEccccccc-cCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCC---CCCcCCCCCCCHHHHHH
Q 048654 560 --------LRIGRYSQHFVDL-LTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPS---HNHLTPIAKLSGGQKAR 627 (723)
Q Consensus 560 --------~~ig~~~q~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~~~~~~i~~LSGGqkqR 627 (723)
..++|++|..... .++.++... ..............+.+..+++.+++.. ....+++.+|||||+||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 169 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAY-GLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQR 169 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHh-HHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHH
Confidence 2478998864211 122222211 1111110000011245667788887742 12235678999999999
Q ss_pred HHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCC
Q 048654 628 VVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGT 705 (723)
Q Consensus 628 v~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~ 705 (723)
|+|||||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|++|+++. .|+
T Consensus 170 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d-----~i~~l~~G~i~~-~g~ 243 (265)
T PRK14252 170 LCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSD-----YTAYMYMGELIE-FGA 243 (265)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCC-----EEEEEECCEEEE-eCC
Confidence 999999999999999999999999999999999998875 589999999999999995 999999999985 477
Q ss_pred HHHHH
Q 048654 706 FEEYK 710 (723)
Q Consensus 706 ~~~~~ 710 (723)
.+++.
T Consensus 244 ~~~~~ 248 (265)
T PRK14252 244 TDTIF 248 (265)
T ss_pred HHHHH
Confidence 76654
No 458
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=303.64 Aligned_cols=213 Identities=25% Similarity=0.356 Sum_probs=159.7
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|++. +|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+......
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~~~~~~-------- 69 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDITNLPPE-------- 69 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcCcCChh--------
Confidence 5689999999875 89999999999999999999999999999999998654 456777766654321100
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
+..++++.+.... .....+.+++...+. ...........++.++++.+|+.. ..++.+.+|||||
T Consensus 70 -------~~~i~~~~q~~~~------~~~~t~~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 134 (235)
T cd03299 70 -------KRDISYVPQNYAL------FPHMTVYKNIAYGLK-KRKVDKKEIERKVLEIAEMLGIDH-LLNRKPETLSGGE 134 (235)
T ss_pred -------HcCEEEEeecCcc------CCCccHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHcCChh-HHhcCcccCCHHH
Confidence 1112222211100 111122333321111 111122344567888999999964 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
+|||+|||||+.+|++|||||||++||+.++.++.+.|+++ +.|||++||+++++..+||+|++|++|+++. .|+
T Consensus 135 ~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~~~ 213 (235)
T cd03299 135 QQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQ-VGK 213 (235)
T ss_pred HHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecC
Confidence 99999999999999999999999999999999999998764 5799999999999999999999999999974 466
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
++.+
T Consensus 214 ~~~~ 217 (235)
T cd03299 214 PEEV 217 (235)
T ss_pred HHHH
Confidence 6544
No 459
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=311.74 Aligned_cols=218 Identities=17% Similarity=0.226 Sum_probs=161.5
Q ss_pred ceEEEeEEEEeCC---eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARG---KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~---~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|+++||+++|++ .++|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i~~~~~~~--- 78 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEE--FEGKVKIDGELLTAENVWN--- 78 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCCEEEECCEECCcCCHHH---
Confidence 5899999999974 3599999999999999999999999999999999998764 4566777666543221111
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSF 321 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~L 321 (723)
++..++++.+.... ......+.+++...... .........+++..+++.+|+.. ..++++.+|
T Consensus 79 ----------~~~~i~~v~q~~~~-----~~~~~tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~L 141 (277)
T PRK13642 79 ----------LRRKIGMVFQNPDN-----QFVGATVEDDVAFGMEN-QGIPREEMIKRVDEALLAVNMLD-FKTREPARL 141 (277)
T ss_pred ----------HhcceEEEEECHHH-----hhccCCHHHHHHhhHHH-cCCCHHHHHHHHHHHHHHCCCHh-HhhCCcccC
Confidence 11222322221100 00011222333211111 11222334567889999999964 557899999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 322 SGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 322 SGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+|||+|||||+.+|+||||||||++||+.++..|.++|+++ +.|||+||||++++. .||+|++|++|+++.
T Consensus 142 S~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~ 220 (277)
T PRK13642 142 SGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIK 220 (277)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999998754 679999999999997 599999999999974
Q ss_pred ecCChhhHH
Q 048654 398 YRGNFDDFE 406 (723)
Q Consensus 398 ~~g~~~~~~ 406 (723)
.|+.+++.
T Consensus 221 -~g~~~~~~ 228 (277)
T PRK13642 221 -EAAPSELF 228 (277)
T ss_pred -eCCHHHHh
Confidence 47766653
No 460
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=314.45 Aligned_cols=211 Identities=25% Similarity=0.330 Sum_probs=164.3
Q ss_pred CCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc-------
Q 048654 492 TPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK------- 559 (723)
Q Consensus 492 ~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~------- 559 (723)
.+++|.++||++.|+++ .+|+++||+|.+|++++|+|+|||||||||++|+|+++ |++|+|.+++.
T Consensus 42 ~~~~l~i~nl~~~~~~~--~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 42 GDAKLSVEDLDVYYGDD--HALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred CCceEEEEEEEEEeCCe--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 46689999999999753 58999999999999999999999999999999999986 68999987652
Q ss_pred ------eeEEEEcccccc-ccCccccHHHHHHhhCCC--------CCCC----cHHHHHHHHHHhCCCCC---CCCcCCC
Q 048654 560 ------LRIGRYSQHFVD-LLTMEETPVSYLLRLHPD--------QEGL----SKQEAVRAKLGKFGLPS---HNHLTPI 617 (723)
Q Consensus 560 ------~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~L~~~gl~~---~~~~~~i 617 (723)
..++|++|...- ..++.++..... ..... ..+. ...+.+..+++.+++.. ....+++
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 198 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPKSIRENISYGP-RKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNA 198 (305)
T ss_pred cHHHHhhceEEEccCCccccccHHHHHHhHH-hhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCcc
Confidence 248899987421 112222221110 00000 0001 11345778888898842 1224567
Q ss_pred CCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEE-EEE
Q 048654 618 AKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEI-WVV 694 (723)
Q Consensus 618 ~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv-~vl 694 (723)
.+|||||||||+|||||+.+|+||||||||+|||+.++..|.++|+++. .|||+||||++++..+|| ++ ++|
T Consensus 199 ~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d-----~i~~~l 273 (305)
T PRK14264 199 LGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISD-----QTAVFL 273 (305)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcC-----EEEEEe
Confidence 8999999999999999999999999999999999999999999999874 589999999999999995 76 678
Q ss_pred ECCeEEecCCCHHHHHH
Q 048654 695 ENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 695 ~~G~i~~~~g~~~~~~~ 711 (723)
++|+++. .|+++++..
T Consensus 274 ~~G~i~~-~g~~~~~~~ 289 (305)
T PRK14264 274 TGGELVE-YDDTDKIFE 289 (305)
T ss_pred cCCEEEE-eCCHHHHHh
Confidence 9999985 578877643
No 461
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.7e-35 Score=300.22 Aligned_cols=209 Identities=29% Similarity=0.419 Sum_probs=153.8
Q ss_pred eEEEeEEEEeCC----eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHH
Q 048654 166 ITIDNFSVAARG----KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 166 I~l~nls~~y~~----~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
|+++|+++.|++ +++|+|+||+|.+|++++|+|+||||||||+++|+|++.| ..|+|.+.+..+.......
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~--- 76 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSV--QEGSLKVLGQELYGASEKE--- 76 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEhHhcCHhH---
Confidence 789999999975 6899999999999999999999999999999999998654 5667777665543211110
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHH-hcCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQ-ILGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
....+..++++.+.... .....+.+++... .... .........++.++++.+|+.. ..++.+.+
T Consensus 77 -------~~~~~~~i~~~~q~~~~------~~~~t~~~n~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~ 141 (220)
T TIGR02982 77 -------LVQLRRNIGYIFQAHNL------LGFLTARQNVQMA-LELQPNLSYQEARERARAMLEAVGLGD-HLDYYPHN 141 (220)
T ss_pred -------HHHHHhheEEEcCChhh------cCCCCHHHHHHHH-HHhccCCCHHHHHHHHHHHHHHcCChh-hhhcChhh
Confidence 00112223322221100 0011222222211 1111 1223344567899999999964 45788999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
||||||||++|||||+.+|++|||||||++||+.++..|.++|+++ +.|||+||||++.. ++||+|++|++|++
T Consensus 142 lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 142 LSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999888754 57999999999965 79999999999986
No 462
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=291.04 Aligned_cols=219 Identities=25% Similarity=0.330 Sum_probs=168.4
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||+++|+++.+|+++|++|++|.+++|||||||||||||.+++++... .+|.|.+.+.++...+...+.
T Consensus 1 MI~i~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~--d~G~i~i~g~~~~~~~s~~LA---- 74 (252)
T COG4604 1 MITIENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKK--DSGEITIDGLELTSTPSKELA---- 74 (252)
T ss_pred CeeehhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccc--cCceEEEeeeecccCChHHHH----
Confidence 48899999999999999999999999999999999999999999999988654 456777778887765544332
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHH-HHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELY-EKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
+.++.+.+..... ....+.+-+.+.. .+-......+.+..+.++++.|+|. .+.+|+..+|||
T Consensus 75 ---------k~lSILkQ~N~i~------~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~-~l~dryLd~LSG 138 (252)
T COG4604 75 ---------KKLSILKQENHIN------SRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLE-DLSDRYLDELSG 138 (252)
T ss_pred ---------HHHHHHHhhchhh------heeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhccc-chHHHhHHhccc
Confidence 2222221110000 0001111111100 0001112346677899999999997 567899999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEec
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR----WKKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYR 399 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~----~~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~ 399 (723)
|||||..||..|+++.+.++||||.|+||......++..|++ +++|||+|-||++|+.-++|+|+-|++|+++ ..
T Consensus 139 GQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv-~~ 217 (252)
T COG4604 139 GQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVV-KQ 217 (252)
T ss_pred chhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEE-ec
Confidence 999999999999999999999999999999988877777764 5899999999999999999999999999996 57
Q ss_pred CChhhHH
Q 048654 400 GNFDDFE 406 (723)
Q Consensus 400 g~~~~~~ 406 (723)
|++++..
T Consensus 218 G~~~eii 224 (252)
T COG4604 218 GSPDEII 224 (252)
T ss_pred CCHHHhc
Confidence 8887764
No 463
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.9e-35 Score=306.94 Aligned_cols=200 Identities=25% Similarity=0.347 Sum_probs=149.8
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++||++.|+++++|+++||+|++|++++|+|||||||||||++|+|+..|. .|+|.+.+...
T Consensus 4 ~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~--~G~i~~~~~~~------------- 68 (251)
T PRK09544 4 LVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPD--EGVIKRNGKLR------------- 68 (251)
T ss_pred EEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--ceEEEECCccC-------------
Confidence 689999999999889999999999999999999999999999999999987654 45554432100
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
++++.+.... .......+.+. +. ........++.++++.+|+.+ ..++++.+||||
T Consensus 69 -----------i~~v~q~~~~----~~~l~~~~~~~-------~~-~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG 124 (251)
T PRK09544 69 -----------IGYVPQKLYL----DTTLPLTVNRF-------LR-LRPGTKKEDILPALKRVQAGH-LIDAPMQKLSGG 124 (251)
T ss_pred -----------EEEecccccc----ccccChhHHHH-------Hh-ccccccHHHHHHHHHHcCChH-HHhCChhhCCHH
Confidence 0000000000 00000000010 00 000111345778899999974 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++ +++ ..|
T Consensus 125 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~-~~g 202 (251)
T PRK09544 125 ETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HIC-CSG 202 (251)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceE-eeC
Confidence 999999999999999999999999999999999999988654 67999999999999999999999975 665 457
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+.+++
T Consensus 203 ~~~~~ 207 (251)
T PRK09544 203 TPEVV 207 (251)
T ss_pred CHHHH
Confidence 76554
No 464
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-36 Score=301.18 Aligned_cols=202 Identities=29% Similarity=0.456 Sum_probs=161.6
Q ss_pred CCCCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------
Q 048654 491 LTPPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------- 559 (723)
Q Consensus 491 ~~~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------- 559 (723)
..+++|+++||++.|+++ .+|+||||+|++||.++|+|||||||||||++|+|.++|++|.+.+.++
T Consensus 27 ~~~~li~l~~v~v~r~gk--~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~pssg~~~~~G~~~G~~~~~~el 104 (257)
T COG1119 27 INEPLIELKNVSVRRNGK--KILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPSSGDVTLLGRRFGKGETIFEL 104 (257)
T ss_pred CCcceEEecceEEEECCE--eeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCCCCceeeeeeeccCCcchHHH
Confidence 356899999999999874 5899999999999999999999999999999999999999999876543
Q ss_pred -eeEEEEccccccccCccccHHHHHHhh-------CCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHH
Q 048654 560 -LRIGRYSQHFVDLLTMEETPVSYLLRL-------HPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 560 -~~ig~~~q~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lA 631 (723)
.+||+++......+...++....++.. +..........++..+|+.||+.+ ..++++.+||-||||||.||
T Consensus 105 rk~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~-la~r~~~~LS~Ge~rrvLia 183 (257)
T COG1119 105 RKRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKH-LADRPFGSLSQGEQRRVLIA 183 (257)
T ss_pred HHHhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchhh-hccCchhhcCHhHHHHHHHH
Confidence 357777643322222222211111111 110111113456788999999986 55689999999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC-----ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEE
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT-----GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVS 700 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~-----~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~ 700 (723)
|||+.+|.+|||||||+|||...++.+.+.|.++. .++|+|||..+.+..+. ++++.+.+|+++
T Consensus 184 RALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~-----th~lll~~g~v~ 252 (257)
T COG1119 184 RALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCF-----THRLLLKEGEVV 252 (257)
T ss_pred HHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhccccc-----ceEEEeeCCcee
Confidence 99999999999999999999999999999999875 36999999999998776 589999999996
No 465
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-35 Score=304.13 Aligned_cols=200 Identities=32% Similarity=0.438 Sum_probs=153.7
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~ig~ 564 (723)
|+++|+++.|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999999642 35899999999999999999999999999999999999999999998763 23889
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHH---------HhC--CCCCCCCcCCCCCCCHHHHHHHHHHHH
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKL---------GKF--GLPSHNHLTPIAKLSGGQKARVVFTSI 633 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---------~~~--gl~~~~~~~~i~~LSGGqkqRv~lAra 633 (723)
++|... .+ ..+....+...... ... ..+...+ ..+ ++.... .+++..|||||||||+||||
T Consensus 80 ~~q~~~-~~--~~tv~~nl~~~~~~---~~~-~~~~~~~~~~~l~~~~~~l~~~~~~~~-~~~~~~LS~G~~~rl~la~a 151 (236)
T cd03253 80 VPQDTV-LF--NDTIGYNIRYGRPD---ATD-EEVIEAAKAAQIHDKIMRFPDGYDTIV-GERGLKLSGGEKQRVAIARA 151 (236)
T ss_pred ECCCCh-hh--cchHHHHHhhcCCC---CCH-HHHHHHHHHcCcHHHHHhccccccchh-hcCCCcCCHHHHHHHHHHHH
Confidence 998742 11 12333322111111 111 1222222 333 333222 34568999999999999999
Q ss_pred HccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHH
Q 048654 634 SMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKE 711 (723)
Q Consensus 634 l~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~ 711 (723)
|+.+|++|||||||+|||+.++..+.++|.++. .|||+|||+.+++.. | |++++|++|+++ ..|+.+++.+
T Consensus 152 L~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~-~-----d~~~~l~~g~i~-~~~~~~~~~~ 224 (236)
T cd03253 152 ILKNPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN-A-----DKIIVLKDGRIV-ERGTHEELLA 224 (236)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-C-----CEEEEEECCEEE-eeCCHHHHhh
Confidence 999999999999999999999999999998774 589999999999964 7 499999999997 4577777654
No 466
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=308.24 Aligned_cols=192 Identities=26% Similarity=0.337 Sum_probs=150.1
Q ss_pred ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEEcccc--ccccCccccHHHHHHhhC
Q 048654 510 DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHF--VDLLTMEETPVSYLLRLH 587 (723)
Q Consensus 510 ~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~~q~~--~~~~~~~~~~~~~~~~~~ 587 (723)
.++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. +++++|.. ...+++.++... .....
T Consensus 37 ~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~g~--~~~~~~~~~~~~~~tv~enl~~-~~~~~ 113 (264)
T PRK13546 37 FFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGE--VSVIAISAGLSGQLTGIENIEF-KMLCM 113 (264)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCE--EeEEecccCCCCCCcHHHHHHH-HHHHc
Confidence 35899999999999999999999999999999999999999999998875 45555542 122233332211 11111
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHc--
Q 048654 588 PDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF-- 665 (723)
Q Consensus 588 ~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~-- 665 (723)
..........+..++..+++.... .+++.+|||||+|||+||+||+.+|+||||||||+|||+.+...+.+.|.++
T Consensus 114 -~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~ 191 (264)
T PRK13546 114 -GFKRKEIKAMTPKIIEFSELGEFI-YQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKE 191 (264)
T ss_pred -CCCHHHHHHHHHHHHHHcCCchhh-cCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHH
Confidence 110001123345678888887544 4678999999999999999999999999999999999999999999999876
Q ss_pred -CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHHHH
Q 048654 666 -TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYKED 712 (723)
Q Consensus 666 -~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~~~ 712 (723)
+.|||+||||++++..+|| +|++|++|+|+. .|+++++...
T Consensus 192 ~g~tiIiisH~~~~i~~~~d-----~i~~l~~G~i~~-~g~~~~~~~~ 233 (264)
T PRK13546 192 QNKTIFFVSHNLGQVRQFCT-----KIAWIEGGKLKD-YGELDDVLPK 233 (264)
T ss_pred CCCEEEEEcCCHHHHHHHcC-----EEEEEECCEEEE-eCCHHHHHHH
Confidence 4699999999999999995 999999999975 5787776543
No 467
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=321.85 Aligned_cols=212 Identities=23% Similarity=0.334 Sum_probs=156.6
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|++ ||+++|+++.+ |+||+|++|++++|+|||||||||||++|+|+..| ..|.|.+.+..+.......
T Consensus 1 ~l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~------ 69 (352)
T PRK11144 1 MLEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGI------ 69 (352)
T ss_pred CeEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccccccc------
Confidence 3777 99999987653 89999999999999999999999999999998654 5667777665543210000
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
.....+..++++.+.... .....+.+++.... ......++.++++.+|+.+ ..++++.+||||
T Consensus 70 ---~~~~~~~~i~~v~q~~~l------~~~~tv~enl~~~~-------~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG 132 (352)
T PRK11144 70 ---CLPPEKRRIGYVFQDARL------FPHYKVRGNLRYGM-------AKSMVAQFDKIVALLGIEP-LLDRYPGSLSGG 132 (352)
T ss_pred ---ccchhhCCEEEEcCCccc------CCCCcHHHHHHhhh-------hhhhHHHHHHHHHHcCCch-hhhCCcccCCHH
Confidence 000011122222221100 11112223322111 1123457889999999974 457999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++.+ |
T Consensus 133 q~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~-g 211 (352)
T PRK11144 133 EKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAF-G 211 (352)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEe-c
Confidence 999999999999999999999999999999999999988754 57999999999999999999999999999754 6
Q ss_pred ChhhH
Q 048654 401 NFDDF 405 (723)
Q Consensus 401 ~~~~~ 405 (723)
+.+++
T Consensus 212 ~~~~i 216 (352)
T PRK11144 212 PLEEV 216 (352)
T ss_pred CHHHH
Confidence 66554
No 468
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=303.28 Aligned_cols=182 Identities=25% Similarity=0.364 Sum_probs=155.3
Q ss_pred cceEEEeEEEEeCC---------eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCC
Q 048654 164 KDITIDNFSVAARG---------KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGD 234 (723)
Q Consensus 164 ~~I~l~nls~~y~~---------~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~ 234 (723)
.+++++|+++.|.- ..+++||||+|.+||++||||.||||||||-|+|.|+..| ..|+|.|.++++...
T Consensus 3 ~ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~p--t~G~i~f~g~~i~~~ 80 (268)
T COG4608 3 PLLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEP--TSGEILFEGKDITKL 80 (268)
T ss_pred ceEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCC--CCceEEEcCcchhhc
Confidence 46899999999942 3799999999999999999999999999999999998754 566777765543211
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcccc
Q 048654 235 DRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQ 314 (723)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~ 314 (723)
. .....+++.++|+.+|+.....
T Consensus 81 ~---------------------------------------------------------~~~~~~~v~elL~~Vgl~~~~~ 103 (268)
T COG4608 81 S---------------------------------------------------------KEERRERVLELLEKVGLPEEFL 103 (268)
T ss_pred c---------------------------------------------------------hhHHHHHHHHHHHHhCCCHHHh
Confidence 0 1223456888999999988778
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEE
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHL 390 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L 390 (723)
+|++++|||||+|||+|||||+.+|+++++|||+++||...+..+.++|.++ +.|.|+||||+..+..+||||++|
T Consensus 104 ~ryPhelSGGQrQRi~IARALal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VM 183 (268)
T COG4608 104 YRYPHELSGGQRQRIGIARALALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVM 183 (268)
T ss_pred hcCCcccCchhhhhHHHHHHHhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEE
Confidence 9999999999999999999999999999999999999999888888887654 679999999999999999999999
Q ss_pred eCCEEEEecCChhhH
Q 048654 391 HDQKLHFYRGNFDDF 405 (723)
Q Consensus 391 ~~G~i~~~~g~~~~~ 405 (723)
..|+|+.. |+.+++
T Consensus 184 y~G~iVE~-g~~~~~ 197 (268)
T COG4608 184 YLGKIVEI-GPTEEV 197 (268)
T ss_pred ecCceeEe-cCHHHH
Confidence 99999865 665554
No 469
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-37 Score=294.60 Aligned_cols=212 Identities=29% Similarity=0.403 Sum_probs=170.2
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEE----------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGR---------- 564 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~---------- 564 (723)
|++++||+++|++ ..+|+++|++|++|.+++|||||||||||||.+++.++++++|+|++++..-..+
T Consensus 1 MI~i~nv~K~y~~--~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lS 78 (252)
T COG4604 1 MITIENVSKSYGT--KVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLS 78 (252)
T ss_pred CeeehhhhHhhCC--EEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHH
Confidence 6889999999986 4589999999999999999999999999999999999999999999887532222
Q ss_pred -Eccc--cccccCccccHHHHHHhhCCCCCCC---cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCC
Q 048654 565 -YSQH--FVDLLTMEETPVSYLLRLHPDQEGL---SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKP 638 (723)
Q Consensus 565 -~~q~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p 638 (723)
+.|. +...+++.+. + .+..||...|. .++..+.++++.|+|.... ++...+||||||||+.||..++++.
T Consensus 79 ILkQ~N~i~~rlTV~dL-v--~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~-dryLd~LSGGQrQRAfIAMVlaQdT 154 (252)
T COG4604 79 ILKQENHINSRLTVRDL-V--GFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLS-DRYLDELSGGQRQRAFIAMVLAQDT 154 (252)
T ss_pred HHHhhchhhheeEHHHH-h--hcCCCcccCCCCchHHHHHHHHHHHHhcccchH-HHhHHhcccchhhhhhhheeeeccC
Confidence 2231 1122222221 1 12334443332 2456688999999998644 5778999999999999999999999
Q ss_pred CeEEeccCCCCCCHHHHHHHHHHHHH----cCceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHHH-HHH
Q 048654 639 HILLLDEPTNHLDMQSIDALADALDE----FTGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEYK-EDL 713 (723)
Q Consensus 639 ~lLlLDEPT~~LD~~s~~~l~~~L~~----~~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~~-~~~ 713 (723)
+.++||||.|+||+.....+++.|+. +++|||+|-||.+|+..++| +|+.|++|+++ ..|+++++. .+.
T Consensus 155 dyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD-----~IVAlK~G~vv-~~G~~~eii~~~~ 228 (252)
T COG4604 155 DYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSD-----HIVALKNGKVV-KQGSPDEIIQPEI 228 (252)
T ss_pred cEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhh-----heeeecCCEEE-ecCCHHHhcCHHH
Confidence 99999999999999998888888865 46899999999999999885 89999999997 468988764 466
Q ss_pred HHHHH
Q 048654 714 QREIK 718 (723)
Q Consensus 714 ~~~~~ 718 (723)
++++.
T Consensus 229 L~eiy 233 (252)
T COG4604 229 LSEIY 233 (252)
T ss_pred HHHHh
Confidence 77764
No 470
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.9e-35 Score=301.55 Aligned_cols=205 Identities=27% Similarity=0.399 Sum_probs=155.0
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|++++|+++++|+|+||+|.+|++++|+|||||||||||++|+|+..| ..|.|.+.+..+.....
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~~~~~~~~~~--------- 69 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRP--TSGEIIFDGHPWTRKDL--------- 69 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecccccc---------
Confidence 5789999999999999999999999999999999999999999999998654 45666665543321100
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
..++++.+.... .....+.+++.... .+. +. ...++.++++.+|+.. ..++++.+|||||
T Consensus 70 --------~~~~~~~q~~~~------~~~~t~~~~~~~~~-~~~--~~--~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 129 (223)
T TIGR03740 70 --------HKIGSLIESPPL------YENLTARENLKVHT-TLL--GL--PDSRIDEVLNIVDLTN-TGKKKAKQFSLGM 129 (223)
T ss_pred --------ccEEEEcCCCCc------cccCCHHHHHHHHH-HHc--CC--CHHHHHHHHHHcCCcH-HHhhhHhhCCHHH
Confidence 011111111000 00112222222111 111 11 1346788999999974 4578899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCCh
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNF 402 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~ 402 (723)
+||++|||||+.+|+||||||||++||+.++..+.++|+++ +.|||++|||++++..+||+|++|++|+++. .|+.
T Consensus 130 ~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~ 208 (223)
T TIGR03740 130 KQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGY-QGKI 208 (223)
T ss_pred HHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEE-ecCh
Confidence 99999999999999999999999999999999999999765 5699999999999999999999999999974 4554
No 471
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.2e-35 Score=303.32 Aligned_cols=214 Identities=26% Similarity=0.354 Sum_probs=159.0
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+..... .
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~~~~--~------ 70 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATRVHA--R------ 70 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCCh--h------
Confidence 5789999999999999999999999999999999999999999999998654 45666665554422111 0
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
+..++++++.... .....+.+++.... .............+.++++.+++. ...++.+..|||||
T Consensus 71 -------~~~i~~~~q~~~~------~~~~t~~enl~~~~-~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~ 135 (237)
T TIGR00968 71 -------DRKIGFVFQHYAL------FKHLTVRDNIAFGL-EIRKHPKAKIKARVEELLELVQLE-GLGDRYPNQLSGGQ 135 (237)
T ss_pred -------hcCEEEEecChhh------ccCCcHHHHHHhHH-HhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHH
Confidence 0111111111000 00111222221111 111111223346778999999996 44578899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCC
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGN 401 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~ 401 (723)
+||++|||||+.+|+||||||||++||+.++.++.++|.+. +.|||++||+++++..+||+|++|++|+++. .|+
T Consensus 136 ~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~-~~~ 214 (237)
T TIGR00968 136 RQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQ-IGS 214 (237)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEE-ecC
Confidence 99999999999999999999999999999999999999764 5799999999999999999999999999974 466
Q ss_pred hhhH
Q 048654 402 FDDF 405 (723)
Q Consensus 402 ~~~~ 405 (723)
.+.+
T Consensus 215 ~~~~ 218 (237)
T TIGR00968 215 PDEV 218 (237)
T ss_pred HHHH
Confidence 5554
No 472
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.8e-35 Score=305.84 Aligned_cols=201 Identities=24% Similarity=0.321 Sum_probs=148.5
Q ss_pred EEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHHHHH
Q 048654 173 VAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEELVKL 252 (723)
Q Consensus 173 ~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l 252 (723)
+.|+.+++|+|+||+|++|++++|+|+|||||||||++|+|+..| ..|+|.+.+..+.... . .+
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~-~-------------~~ 92 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRR-K-------------KF 92 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccc-h-------------hh
Confidence 557778899999999999999999999999999999999998755 4566666554321110 0 01
Q ss_pred HHHHHhhh-cCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHHHHHHH
Q 048654 253 REEVASLQ-NSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWRMRISL 331 (723)
Q Consensus 253 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQRvaL 331 (723)
+..++++. +.... .....+.+.+... ..+..........++..+++.+|+.+ ..++++.+||||||||++|
T Consensus 93 ~~~i~~~~~~~~~~------~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~qrl~l 164 (236)
T cd03267 93 LRRIGVVFGQKTQL------WWDLPVIDSFYLL-AAIYDLPPARFKKRLDELSELLDLEE-LLDTPVRQLSLGQRMRAEI 164 (236)
T ss_pred cccEEEEcCCcccc------CCCCcHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHcCChh-HhcCChhhCCHHHHHHHHH
Confidence 11222221 11000 0011222222111 11112223344567788999999974 4578899999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 332 ARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 332 ArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
||||+.+|+||||||||++||+.++.+|.++|.++ +.|||+|||+++++..+||+|++|++|+++.
T Consensus 165 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 234 (236)
T cd03267 165 AAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLY 234 (236)
T ss_pred HHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 99999999999999999999999999999999865 4799999999999999999999999999863
No 473
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.8e-35 Score=297.75 Aligned_cols=203 Identities=26% Similarity=0.355 Sum_probs=147.4
Q ss_pred EEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhH
Q 048654 168 IDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHE 247 (723)
Q Consensus 168 l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~ 247 (723)
++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~--------- 69 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKK--------- 69 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhh---------
Confidence 47899999989999999999999999999999999999999999998654 5567777665532111100
Q ss_pred HHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHHH
Q 048654 248 ELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWRM 327 (723)
Q Consensus 248 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQ 327 (723)
.....+..++++.+.... .....+.+++.... ............++.++++.+|+.. ..++++.+|||||||
T Consensus 70 ~~~~~~~~i~~~~q~~~~------~~~~t~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~lS~G~~q 141 (206)
T TIGR03608 70 ASKFRREKLGYLFQNFAL------IENETVEENLDLGL-KYKKLSKKEKREKKKEALEKVGLNL-KLKQKIYELSGGEQQ 141 (206)
T ss_pred HHHHHHhCeeEEecchhh------ccCCcHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCchh-hhcCChhhCCHHHHH
Confidence 000111222222211100 00112222222111 1111222344567889999999964 457899999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEE
Q 048654 328 RISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHL 390 (723)
Q Consensus 328 RvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L 390 (723)
|++|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+|||+++++ .+||+|++|
T Consensus 142 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 142 RVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred HHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 999999999999999999999999999999999999865 57999999999977 579999875
No 474
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.3e-35 Score=291.96 Aligned_cols=164 Identities=34% Similarity=0.530 Sum_probs=137.5
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc----------eeEEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK----------LRIGRY 565 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~----------~~ig~~ 565 (723)
|+++|+++.|++....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4689999999754235899999999999999999999999999999999999999999998774 135666
Q ss_pred ccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 566 SQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 566 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
+|+.. +. ..+ +.+.+ +..|||||+|||+||||++.+|++|||||
T Consensus 81 ~q~~~--~~-~~t--------------------v~~~i-------------~~~LS~G~~qrv~laral~~~p~~lllDE 124 (178)
T cd03247 81 NQRPY--LF-DTT--------------------LRNNL-------------GRRFSGGERQRLALARILLQDAPIVLLDE 124 (178)
T ss_pred ccCCe--ee-ccc--------------------HHHhh-------------cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 66421 00 001 11111 47899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHc--CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEe
Q 048654 646 PTNHLDMQSIDALADALDEF--TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSR 701 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~--~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~ 701 (723)
||++||+.+++.+.++|.++ +.|||++|||.+++. .| |++++|++|+++.
T Consensus 125 P~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~-----d~~~~l~~g~i~~ 176 (178)
T cd03247 125 PTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIE-HM-----DKILFLENGKIIM 176 (178)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hC-----CEEEEEECCEEEe
Confidence 99999999999999999887 368999999999986 67 4999999999964
No 475
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=316.02 Aligned_cols=223 Identities=21% Similarity=0.276 Sum_probs=164.0
Q ss_pred cceEEEeEEEEeC--CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHH
Q 048654 164 KDITIDNFSVAAR--GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 164 ~~I~l~nls~~y~--~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~ 238 (723)
..|+++|++++|. ..++|+|+||+|++|+++||+|+|||||||||++|+|+..+ .|..|.|.+.++++......
T Consensus 79 ~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~- 157 (329)
T PRK14257 79 NVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS- 157 (329)
T ss_pred ceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc-
Confidence 4699999999995 45799999999999999999999999999999999998653 24578888877765321100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhCCCCc---ccc
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILG-SDAAEAQASKILAGLGFTK---EMQ 314 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~ 314 (723)
...++..++++++.... ....+.+++.... ...... .....+.+..+++.+++.. ...
T Consensus 158 ----------~~~lr~~i~~v~q~~~~-------~~~ti~eNi~~~~-~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~ 219 (329)
T PRK14257 158 ----------SLELRTRIGMVFQKPTP-------FEMSIFDNVAYGP-RNNGINDRKILEKIVEKSLKSAALWDEVKDDL 219 (329)
T ss_pred ----------hHhhhccEEEEecCCcc-------CCCcHHHHHHhHH-HhcCCChHHHHHHHHHHHHHHcCCcchhhhhh
Confidence 01223334444322111 0112223332111 111111 1112344677888888632 234
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
++++..|||||||||+|||||+.+|+||||||||++||+.+..++.+.|+++ +.|||+|||+++++..+||+|++|++
T Consensus 220 ~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~ 299 (329)
T PRK14257 220 DKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQ 299 (329)
T ss_pred hCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6889999999999999999999999999999999999999999999999865 47999999999999999999999999
Q ss_pred CEEEEecCChhhHH
Q 048654 393 QKLHFYRGNFDDFE 406 (723)
Q Consensus 393 G~i~~~~g~~~~~~ 406 (723)
|+++.+ |++.++.
T Consensus 300 G~i~e~-g~~~~l~ 312 (329)
T PRK14257 300 GWIEEA-GETKTIF 312 (329)
T ss_pred CEEEEe-CCHHHHh
Confidence 999754 7776653
No 476
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2e-35 Score=291.12 Aligned_cols=159 Identities=36% Similarity=0.616 Sum_probs=132.1
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce-----------eEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL-----------RIGR 564 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~-----------~ig~ 564 (723)
|+++|+++.|++....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 46899999997533458999999999999999999999999999999999999999999987631 3455
Q ss_pred EccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 565 YSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 565 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
++|... .+ ..+ +.+.+ |||||+|||+|||||+.+|++||||
T Consensus 81 ~~q~~~-~~--~~t--------------------v~~~l----------------LS~G~~qrv~la~al~~~p~~lllD 121 (173)
T cd03246 81 LPQDDE-LF--SGS--------------------IAENI----------------LSGGQRQRLGLARALYGNPRILVLD 121 (173)
T ss_pred ECCCCc-cc--cCc--------------------HHHHC----------------cCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 555321 00 001 11111 9999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 645 EPTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
|||++||+.++..+.++|+++. .|||+||||++++. +|| ++++|++|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~-~~d-----~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLA-SAD-----RILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-hCC-----EEEEEECCCC
Confidence 9999999999999999998763 58999999999884 784 9999999974
No 477
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.8e-35 Score=297.68 Aligned_cols=199 Identities=23% Similarity=0.348 Sum_probs=150.5
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVS 244 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~ 244 (723)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+..| ..|+|.+.+..+.....
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~~~~~-------- 70 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIRRQRD-------- 70 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcccchH--------
Confidence 47899999999999999999999999999999999999999999999998765 45667666554422110
Q ss_pred hhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 245 AHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
.++..+.++.+.... .....+.+++.... .. .+ .....++.++++.+|+.. ..++++.+||||
T Consensus 71 ------~~~~~~~~~~~~~~~------~~~~tv~e~l~~~~-~~--~~-~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G 133 (204)
T PRK13538 71 ------EYHQDLLYLGHQPGI------KTELTALENLRFYQ-RL--HG-PGDDEALWEALAQVGLAG-FEDVPVRQLSAG 133 (204)
T ss_pred ------HhhhheEEeCCcccc------CcCCcHHHHHHHHH-Hh--cC-ccHHHHHHHHHHHcCCHH-HhhCChhhcCHH
Confidence 011222222211100 01112223322211 11 11 123467889999999964 457899999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEE
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHL 390 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L 390 (723)
||||++|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+.+|++++
T Consensus 134 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 134 QQRRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999999999999999999999875 579999999999999988888887
No 478
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.3e-35 Score=294.80 Aligned_cols=187 Identities=24% Similarity=0.333 Sum_probs=150.7
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
..|+++|+++.|++....+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 468999999999753235899999999999999999999999999999999999999999998763 258
Q ss_pred EEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEE
Q 048654 563 GRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILL 642 (723)
Q Consensus 563 g~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLl 642 (723)
+|++|... .+ ..+....+ ..+.. . ....+...++ + ..++..|||||+|||+|||+|+.+|+|||
T Consensus 85 ~~v~q~~~-~~--~~tv~~~l-~~~~~---~-~~~~~~~~l~---~-----~~~~~~LS~G~~qrv~laral~~~p~lll 148 (207)
T cd03369 85 TIIPQDPT-LF--SGTIRSNL-DPFDE---Y-SDEEIYGALR---V-----SEGGLNLSQGQRQLLCLARALLKRPRVLV 148 (207)
T ss_pred EEEecCCc-cc--CccHHHHh-cccCC---C-CHHHHHHHhh---c-----cCCCCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 99999742 11 12333322 22211 1 1233444444 2 24568999999999999999999999999
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEec
Q 048654 643 LDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRF 702 (723)
Q Consensus 643 LDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~ 702 (723)
|||||++||+.++..+.++|+++. .|||+||||.+++.. | |++++|++|++..+
T Consensus 149 lDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~-~-----d~v~~l~~g~i~~~ 204 (207)
T cd03369 149 LDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIID-Y-----DKILVMDAGEVKEY 204 (207)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-C-----CEEEEEECCEEEec
Confidence 999999999999999999999873 589999999999975 7 49999999999753
No 479
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-35 Score=345.59 Aligned_cols=204 Identities=29% Similarity=0.395 Sum_probs=162.4
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc-----------eeE
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK-----------LRI 562 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~-----------~~i 562 (723)
.-++++||+|+|+....++|+|+||+|++||++||+|+||||||||+|+|+|+++|++|+|++++. ..+
T Consensus 470 g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~i 549 (709)
T COG2274 470 GEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQV 549 (709)
T ss_pred ceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhhe
Confidence 458999999999876567999999999999999999999999999999999999999999998873 369
Q ss_pred EEEccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCC-----------CCCCCcCCCCCCCHHHHHHHHHH
Q 048654 563 GRYSQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGL-----------PSHNHLTPIAKLSGGQKARVVFT 631 (723)
Q Consensus 563 g~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl-----------~~~~~~~~i~~LSGGqkqRv~lA 631 (723)
||++|+..- ...+..+.+....+.. ..+++.+++...|. ...... .-..||||||||++||
T Consensus 550 g~V~Q~~~L---f~gSI~eNi~l~~p~~----~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E-~G~~LSGGQrQrlalA 621 (709)
T COG2274 550 GYVLQDPFL---FSGSIRENIALGNPEA----TDEEIIEAAQLAGAHEFIENLPMGYDTPVGE-GGANLSGGQRQRLALA 621 (709)
T ss_pred eEEcccchh---hcCcHHHHHhcCCCCC----CHHHHHHHHHHhCcHHHHHhccccccccccc-CCCCCCHHHHHHHHHH
Confidence 999997421 1122222222222221 22334444433333 211111 2357999999999999
Q ss_pred HHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 632 SISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 632 ral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
|||+++|+||||||||++||+.+...+.+.|.++. .|+|+|||.+..+. .| |||+||++|+|+. .|+.+++
T Consensus 622 RaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~-~a-----drIiVl~~Gkiv~-~gs~~el 694 (709)
T COG2274 622 RALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIR-SA-----DRIIVLDQGKIVE-QGSHEEL 694 (709)
T ss_pred HHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhh-hc-----cEEEEccCCceec-cCCHHHH
Confidence 99999999999999999999999999999999986 79999999999996 45 5999999999985 6999988
Q ss_pred HHH
Q 048654 710 KED 712 (723)
Q Consensus 710 ~~~ 712 (723)
.+.
T Consensus 695 l~~ 697 (709)
T COG2274 695 LAQ 697 (709)
T ss_pred HHh
Confidence 765
No 480
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.1e-35 Score=298.44 Aligned_cols=206 Identities=21% Similarity=0.289 Sum_probs=152.8
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
++++|+++.|+. ++.|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+.++.... .
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~--~------- 67 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLA--P------- 67 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCC--h-------
Confidence 468999999974 57899999999999999999999999999999998654 4567776665543211 0
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
.+..++++.+.... .....+.+++...+.. ..........++.++++.+|+.. ..++.+.+|||||
T Consensus 68 ------~~~~i~~v~q~~~~------~~~~t~~en~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~ 133 (213)
T TIGR01277 68 ------YQRPVSMLFQENNL------FAHLTVRQNIGLGLHP-GLKLNAEQQEKVVDAAQQVGIAD-YLDRLPEQLSGGQ 133 (213)
T ss_pred ------hccceEEEeccCcc------CCCCcHHHHHHhHhhc-cCCccHHHHHHHHHHHHHcCcHH-HhhCCcccCCHHH
Confidence 01112222211100 0111222333211110 00111223567888999999964 4578999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEe
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFY 398 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~ 398 (723)
+|||+|||||+.+|+||||||||++||+.++..+.++|.++ +.|||+|||+++++..+||++++|++|++...
T Consensus 134 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~ 210 (213)
T TIGR01277 134 RQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVV 210 (213)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEe
Confidence 99999999999999999999999999999999999988754 57999999999999999999999999999643
No 481
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-35 Score=305.50 Aligned_cols=205 Identities=21% Similarity=0.291 Sum_probs=161.6
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCcceEEECCc----------
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLS-----PTEGEVRRSQK---------- 559 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~-----p~~G~I~~~~~---------- 559 (723)
+|+++||++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|++. |++|+|.+++.
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 5889999999975 358999999999999999999999999999999999864 48999987652
Q ss_pred ---eeEEEEccccccccCccccHHHHHHhhC--CCCCC-CcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHH
Q 048654 560 ---LRIGRYSQHFVDLLTMEETPVSYLLRLH--PDQEG-LSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 ---~~ig~~~q~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|...- +. .+....+.... ..... ....+.+..+++.+|+... ..++++..|||||||||+|
T Consensus 81 ~~~~~i~~~~q~~~~-~~--~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~l 157 (250)
T PRK14266 81 ELRKKVGMVFQKPNP-FP--KSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRLCI 157 (250)
T ss_pred HHhhheEEEecCCcc-Cc--chHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHH
Confidence 248999987421 11 12222221111 11000 0123456778899887431 2246788999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHH
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEE 708 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~ 708 (723)
||||+.+|+||||||||+|||+.++..+.++|.++. .|||+||||++++..+|| ++++|++|+++. .|++++
T Consensus 158 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~-----~i~~l~~G~i~~-~g~~~~ 231 (250)
T PRK14266 158 ARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSK-----YTSFFLNGEIIE-SGLTDQ 231 (250)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcC-----EEEEEECCeEEE-eCCHHH
Confidence 999999999999999999999999999999998874 589999999999999984 999999999974 588877
Q ss_pred HH
Q 048654 709 YK 710 (723)
Q Consensus 709 ~~ 710 (723)
+.
T Consensus 232 ~~ 233 (250)
T PRK14266 232 IF 233 (250)
T ss_pred HH
Confidence 64
No 482
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5e-36 Score=282.71 Aligned_cols=211 Identities=31% Similarity=0.381 Sum_probs=160.3
Q ss_pred ceEEEeEEEEeC----CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 165 DITIDNFSVAAR----GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 165 ~I~l~nls~~y~----~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
.|+++++++..+ ...||++|+|.|.+||.++|||||||||||||-+++|+.. |.+|+|.+.++.....+.....
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA 83 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARA 83 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHH
Confidence 588999999875 3579999999999999999999999999999999999865 4567788888877655443322
Q ss_pred HHHHhhHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCC
Q 048654 241 AVVSAHEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTK 319 (723)
Q Consensus 241 ~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~ 319 (723)
. ++ ..++++.++... .+.....+++.-..+ +..-......+.+.++|+.+||... ...++.
T Consensus 84 ~----------~R~~~vGfVFQSF~L------ip~ltAlENV~lPle-L~ge~~~~~~~~A~~lL~~vGLg~R-l~HyP~ 145 (228)
T COG4181 84 A----------LRARHVGFVFQSFHL------IPNLTALENVALPLE-LRGESSADSRAGAKALLEAVGLGKR-LTHYPA 145 (228)
T ss_pred H----------hhccceeEEEEeeec------cccchhhhhccchhh-hcCCccccHHHHHHHHHHHhCcccc-cccCcc
Confidence 1 11 223333322111 011122222222211 1111244556779999999999854 478999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCcEEEEEeCCHHHHHhhCCEEEEEeCCEE
Q 048654 320 SFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLC----RWKKTLVVVSHDRDFLNTVCTEIIHLHDQKL 395 (723)
Q Consensus 320 ~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~----~~~~TVIivsHdl~~l~~iad~Ii~L~~G~i 395 (723)
+|||||||||+|||||+..|+||+.||||.+||..+-..+.++|- +.+.|+|+||||+..+.+ |+|++.|.+|+|
T Consensus 146 qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c~R~~r~~~G~l 224 (228)
T COG4181 146 QLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-CDRQLRLRSGRL 224 (228)
T ss_pred ccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-hhheeeeeccee
Confidence 999999999999999999999999999999999999888777764 447899999999999987 999999999998
Q ss_pred E
Q 048654 396 H 396 (723)
Q Consensus 396 ~ 396 (723)
+
T Consensus 225 ~ 225 (228)
T COG4181 225 V 225 (228)
T ss_pred c
Confidence 5
No 483
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=297.46 Aligned_cols=217 Identities=30% Similarity=0.392 Sum_probs=160.7
Q ss_pred CCccceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHH
Q 048654 161 ANVKDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQ 240 (723)
Q Consensus 161 ~~~~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~ 240 (723)
...+.|+++|+++.|+++++|+|+||+|++||+|+|+|||||||||||++|+|...|. ++.+.+++......+..
T Consensus 27 ~~~~li~l~~v~v~r~gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~ps--sg~~~~~G~~~G~~~~~--- 101 (257)
T COG1119 27 INEPLIELKNVSVRRNGKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPS--SGDVTLLGRRFGKGETI--- 101 (257)
T ss_pred CCcceEEecceEEEECCEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCC--CCceeeeeeeccCCcch---
Confidence 3456799999999999999999999999999999999999999999999999976554 55666666554321110
Q ss_pred HHHHhhHHHHHHHHHHHhhhcCcC--CCCCCCCCchhhHHHHHHHHHHHHHh---cCchHHHHHHHHHHHhCCCCccccC
Q 048654 241 AVVSAHEELVKLREEVASLQNSTS--VDGEEDGDDANDAGEKLAELYEKLQI---LGSDAAEAQASKILAGLGFTKEMQG 315 (723)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~L~~lgl~~~~~~ 315 (723)
..+++.++++...-. ........+.. +..++..... .-.+....++..+|+.+|+.. +.+
T Consensus 102 ---------~elrk~IG~vS~~L~~~~~~~~~v~dvV-----lSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~-la~ 166 (257)
T COG1119 102 ---------FELRKRIGLVSSELHERFRVRETVRDVV-----LSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKH-LAD 166 (257)
T ss_pred ---------HHHHHHhCccCHHHHhhcccccccceee-----eecccccccccccCCCHHHHHHHHHHHHHcchhh-hcc
Confidence 122223222210000 00000000000 0000111111 112455678999999999974 679
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC-----cEEEEEeCCHHHHHhhCCEEEEE
Q 048654 316 RPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWK-----KTLVVVSHDRDFLNTVCTEIIHL 390 (723)
Q Consensus 316 ~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~-----~TVIivsHdl~~l~~iad~Ii~L 390 (723)
++..+||-||||||.|||||+.+|.+|||||||+|||..++..+.++|.++. .++|+|||..+++..+.++++.+
T Consensus 167 r~~~~LS~Ge~rrvLiaRALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~th~lll 246 (257)
T COG1119 167 RPFGSLSQGEQRRVLIARALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCFTHRLLL 246 (257)
T ss_pred CchhhcCHhHHHHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhcccccceEEEe
Confidence 9999999999999999999999999999999999999999999999998762 48999999999999999999999
Q ss_pred eCCEEEE
Q 048654 391 HDQKLHF 397 (723)
Q Consensus 391 ~~G~i~~ 397 (723)
.+|+++.
T Consensus 247 ~~g~v~~ 253 (257)
T COG1119 247 KEGEVVA 253 (257)
T ss_pred eCCceee
Confidence 9999863
No 484
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.2e-35 Score=322.90 Aligned_cols=216 Identities=24% Similarity=0.278 Sum_probs=160.7
Q ss_pred eEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeee----ecCCChHHHHHHHHh
Q 048654 170 NFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQE----VVGDDRSAIQAVVSA 245 (723)
Q Consensus 170 nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~----~~~~~~~~~~~~~~~ 245 (723)
++.+.|+...+|+|+||+|++|++++|+|+||||||||+++|+|++.| ..|+|.+.++. +...+..
T Consensus 29 ~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~-------- 98 (382)
T TIGR03415 29 EILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAA-------- 98 (382)
T ss_pred HHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHH--------
Confidence 466778999999999999999999999999999999999999998765 45667665542 2111111
Q ss_pred hHHHHHHH-HHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChH
Q 048654 246 HEELVKLR-EEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGG 324 (723)
Q Consensus 246 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 324 (723)
....++ ..++++.+.... .....+.+++..... +..+.......++.++++.+||.. ..++++.+||||
T Consensus 99 --~l~~~r~~~i~~vfQ~~~l------~p~~Tv~eNi~~~~~-~~g~~~~~~~~~a~e~le~vgL~~-~~~~~~~~LSgG 168 (382)
T TIGR03415 99 --TLRRLRTHRVSMVFQKFAL------MPWLTVEENVAFGLE-MQGMPEAERRKRVDEQLELVGLAQ-WADKKPGELSGG 168 (382)
T ss_pred --HHHHHhcCCEEEEECCCcC------CCCCcHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCCHH
Confidence 111111 123333322111 111233343332211 112233445678899999999974 568999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecC
Q 048654 325 WRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRG 400 (723)
Q Consensus 325 qrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g 400 (723)
|||||+|||||+.+|+||||||||++||+.++.++++.|.++ +.|||+||||++++..+||+|++|++|+++. .|
T Consensus 169 q~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~-~g 247 (382)
T TIGR03415 169 MQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQ-HG 247 (382)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ec
Confidence 999999999999999999999999999999999999988754 6799999999999999999999999999975 47
Q ss_pred ChhhHH
Q 048654 401 NFDDFE 406 (723)
Q Consensus 401 ~~~~~~ 406 (723)
+.+++.
T Consensus 248 ~~~ei~ 253 (382)
T TIGR03415 248 TPEEIV 253 (382)
T ss_pred CHHHHh
Confidence 766653
No 485
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.2e-35 Score=301.62 Aligned_cols=202 Identities=28% Similarity=0.397 Sum_probs=146.2
Q ss_pred ceEEEeEEEEeCC--eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHH
Q 048654 165 DITIDNFSVAARG--KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAV 242 (723)
Q Consensus 165 ~I~l~nls~~y~~--~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~ 242 (723)
.|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+..|. .|+|.+.++.+......
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~--~G~i~~~g~~~~~~~~~----- 74 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPT--SGSVLLDGTDIRQLDPA----- 74 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC--CCeEEECCEEhHHCCHH-----
Confidence 3789999999975 57999999999999999999999999999999999987554 55666655543211110
Q ss_pred HHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCC------
Q 048654 243 VSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGR------ 316 (723)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~------ 316 (723)
.++..++++.+.... . ...+.+ .+..........++.++++.+++.+. .++
T Consensus 75 --------~~~~~i~~~~q~~~~------~-~~tv~e-------~l~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~ 131 (220)
T cd03245 75 --------DLRRNIGYVPQDVTL------F-YGTLRD-------NITLGAPLADDERILRAAELAGVTDF-VNKHPNGLD 131 (220)
T ss_pred --------HHHhhEEEeCCCCcc------c-cchHHH-------HhhcCCCCCCHHHHHHHHHHcCcHHH-HHhcccccc
Confidence 011222222221100 0 011111 11110000112345567777777532 233
Q ss_pred -----CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--cEEEEEeCCHHHHHhhCCEEEE
Q 048654 317 -----PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWK--KTLVVVSHDRDFLNTVCTEIIH 389 (723)
Q Consensus 317 -----~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~~--~TVIivsHdl~~l~~iad~Ii~ 389 (723)
.+.+|||||||||+|||||+.+|+||||||||++||+.++.+|.++|+++. .|||+||||++++ .+||+|++
T Consensus 132 ~~~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~ 210 (220)
T cd03245 132 LQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIV 210 (220)
T ss_pred ceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEE
Confidence 357999999999999999999999999999999999999999999998763 6999999999987 69999999
Q ss_pred EeCCEEEE
Q 048654 390 LHDQKLHF 397 (723)
Q Consensus 390 L~~G~i~~ 397 (723)
|++|+++.
T Consensus 211 l~~g~i~~ 218 (220)
T cd03245 211 MDSGRIVA 218 (220)
T ss_pred EeCCeEee
Confidence 99999863
No 486
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=336.07 Aligned_cols=202 Identities=22% Similarity=0.268 Sum_probs=160.8
Q ss_pred EEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCc------------eeEEEE
Q 048654 498 LIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQK------------LRIGRY 565 (723)
Q Consensus 498 ~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~------------~~ig~~ 565 (723)
++|++++|++ ..+|+||||+|.+|++++|+||||||||||+++|+|+++|++|+|.++++ ..++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999975 35899999999999999999999999999999999999999999998763 248999
Q ss_pred ccccc--cccCccccHHHHHHhhCCCC-CCC-cHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeE
Q 048654 566 SQHFV--DLLTMEETPVSYLLRLHPDQ-EGL-SKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHIL 641 (723)
Q Consensus 566 ~q~~~--~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lL 641 (723)
+|... ..+++.++.... ....... ... ...+.+.++++.+++.... ++++.+|||||||||+|||||+.+|+||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGq~qrv~lA~al~~~p~ll 156 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLG-RYPTKGMFVDQDKMYRDTKAIFDELDIDIDP-RAKVATLSVSQMQMIEIAKAFSYNAKIV 156 (491)
T ss_pred ecccccccCCCHHHHhhcc-cccccccccCHHHHHHHHHHHHHHcCCCCCc-cCchhhCCHHHHHHHHHHHHHHhCCCEE
Confidence 99742 222333321110 0000000 000 1124577899999997544 4678999999999999999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 642 LLDEPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 642 lLDEPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||||||+|||+.++..|.++|+++ +.|||+||||++++..+|| +|++|++|+|+. .|+++++
T Consensus 157 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d-----~i~~l~~G~i~~-~~~~~~~ 221 (491)
T PRK10982 157 IMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCD-----EITILRDGQWIA-TQPLAGL 221 (491)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCC-----EEEEEECCEEEe-ecChhhC
Confidence 999999999999999999999886 3689999999999999995 999999999974 5666554
No 487
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=291.28 Aligned_cols=160 Identities=34% Similarity=0.570 Sum_probs=134.2
Q ss_pred EEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce----------eEEEE
Q 048654 496 LQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL----------RIGRY 565 (723)
Q Consensus 496 l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~----------~ig~~ 565 (723)
|+++|+++.|++. .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|+
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 78 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYL 78 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEE
Confidence 4689999999753 58999999999999999999999999999999999999999999887642 35666
Q ss_pred ccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 566 SQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 566 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
+|... +....+ +.+.+. |||||+|||+|||||+.+|+||||||
T Consensus 79 ~q~~~--~~~~~t--------------------v~~~~~---------------LS~G~~qrv~laral~~~p~illlDE 121 (173)
T cd03230 79 PEEPS--LYENLT--------------------VRENLK---------------LSGGMKQRLALAQALLHDPELLILDE 121 (173)
T ss_pred ecCCc--cccCCc--------------------HHHHhh---------------cCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 66421 000001 111110 99999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcC---ceEEEEecCHHHHHHhcCcCCCcEEEEEECCeE
Q 048654 646 PTNHLDMQSIDALADALDEFT---GGVVLVSHDSRLISRVCDDEERSEIWVVENGTV 699 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~~---~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i 699 (723)
||++||+.++..+.++|+++. .|||++|||.+++..+|| ++++|++|++
T Consensus 122 Pt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d-----~i~~l~~g~i 173 (173)
T cd03230 122 PTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCD-----RVAILNNGRI 173 (173)
T ss_pred CccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCC-----EEEEEeCCCC
Confidence 999999999999999998873 589999999999999985 9999999974
No 488
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-35 Score=302.35 Aligned_cols=185 Identities=29% Similarity=0.411 Sum_probs=158.2
Q ss_pred CCeEEEEEEEEEcCCCc-------ccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCceeEEEE
Q 048654 493 PPLLQLIEVSFSYPNRE-------DFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRY 565 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~-------~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~~ig~~ 565 (723)
.++++++|+++.|+.+. ..+++||||+|.+||+++|||.||||||||-|+|.|+++|++|+|++.++...
T Consensus 2 ~~ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~--- 78 (268)
T COG4608 2 EPLLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDIT--- 78 (268)
T ss_pred CceEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchh---
Confidence 35899999999996432 35799999999999999999999999999999999999999999998876310
Q ss_pred ccccccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 566 SQHFVDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 566 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
.+. .....+++.++|+.+|+......+.+.+|||||+|||+|||||+.+|+++++||
T Consensus 79 ------~~~-----------------~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGGQrQRi~IARALal~P~liV~DE 135 (268)
T COG4608 79 ------KLS-----------------KEERRERVLELLEKVGLPEEFLYRYPHELSGGQRQRIGIARALALNPKLIVADE 135 (268)
T ss_pred ------hcc-----------------hhHHHHHHHHHHHHhCCCHHHhhcCCcccCchhhhhHHHHHHHhhCCcEEEecC
Confidence 000 001345688999999998766667779999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEECCeEEecCCCHHHH
Q 048654 646 PTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVENGTVSRFPGTFEEY 709 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~~G~i~~~~g~~~~~ 709 (723)
||++||...+.++.++|.++ +.+.++||||+..+..+|| ||.||..|+|++. |+.+++
T Consensus 136 pvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isd-----ri~VMy~G~iVE~-g~~~~~ 197 (268)
T COG4608 136 PVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISD-----RIAVMYLGKIVEI-GPTEEV 197 (268)
T ss_pred chhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcc-----cEEEEecCceeEe-cCHHHH
Confidence 99999999999999998776 3589999999999999995 9999999999975 555543
No 489
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=5.9e-35 Score=299.39 Aligned_cols=208 Identities=26% Similarity=0.370 Sum_probs=149.1
Q ss_pred ceEEEeEEEEeCC-------eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEee-e---eecC
Q 048654 165 DITIDNFSVAARG-------KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVE-Q---EVVG 233 (723)
Q Consensus 165 ~I~l~nls~~y~~-------~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~-q---~~~~ 233 (723)
+|+++|++++|++ +++|+|+||+|.+|++++|+|+||||||||+++|+|++.|. .|.|.+.+ . ++..
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~--~G~i~~~~~g~~~~~~~ 78 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPD--SGRILVRHEGAWVDLAQ 78 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC--CCeEEEecCCCccchhh
Confidence 3789999999963 47999999999999999999999999999999999987654 45565542 1 1111
Q ss_pred CChHHHHHHHHhhHHHHHH-HHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCcc
Q 048654 234 DDRSAIQAVVSAHEELVKL-REEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKE 312 (723)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~ 312 (723)
.... ....+ ...++++.+.... .....+.+.+...... ..........++.++++.+|+...
T Consensus 79 ~~~~----------~~~~~~~~~i~~~~q~~~~------~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~ 141 (224)
T TIGR02324 79 ASPR----------EVLEVRRKTIGYVSQFLRV------IPRVSALEVVAEPLLE-RGVPREAARARARELLARLNIPER 141 (224)
T ss_pred cCHH----------HHHHHHhcceEEEeccccc------CCCccHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHcCCchh
Confidence 1100 00011 1122333221110 0111222222211111 112223345678899999999754
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEE
Q 048654 313 MQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIH 389 (723)
Q Consensus 313 ~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~ 389 (723)
..++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+|||+++++..+||+|+.
T Consensus 142 ~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~ 221 (224)
T TIGR02324 142 LWHLPPATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMD 221 (224)
T ss_pred hhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEe
Confidence 446889999999999999999999999999999999999999999999999865 57999999999999999999998
Q ss_pred Ee
Q 048654 390 LH 391 (723)
Q Consensus 390 L~ 391 (723)
+.
T Consensus 222 ~~ 223 (224)
T TIGR02324 222 VT 223 (224)
T ss_pred cC
Confidence 63
No 490
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-35 Score=301.68 Aligned_cols=213 Identities=24% Similarity=0.382 Sum_probs=147.4
Q ss_pred ceEEEeEEEEeCC-eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAARG-KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~~-~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.|+++|++++|++ +++|+|+||+|++|++++|+|||||||||||++|+|+..|. .|+|.+.+..+.......+
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~--~G~i~~~g~~~~~~~~~~~---- 75 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQ--KGQILIDGIDIRDISRKSL---- 75 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC--CCEEEECCEeHHHcCHHHH----
Confidence 3789999999975 57999999999999999999999999999999999987554 5566665554322111111
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHH-----HHHHHHHHHhC--CCCccccCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAA-----EAQASKILAGL--GFTKEMQGR 316 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~L~~l--gl~~~~~~~ 316 (723)
+..++++.+.... ....+.+++.... ........ ...+..+++.+ |+... .++
T Consensus 76 ---------~~~i~~~~q~~~~-------~~~tv~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ 135 (229)
T cd03254 76 ---------RSMIGVVLQDTFL-------FSGTIMENIRLGR---PNATDEEVIEAAKEAGAHDFIMKLPNGYDTV-LGE 135 (229)
T ss_pred ---------hhhEEEecCCchh-------hhhHHHHHHhccC---CCCCHHHHHHHHHHhChHHHHHhCcccccCH-hhc
Confidence 1111111110000 0001111110000 00000000 01223444444 55433 457
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeCCE
Q 048654 317 PTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHDQK 394 (723)
Q Consensus 317 ~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~G~ 394 (723)
++.+|||||||||+|||||+.+|++|||||||++||+.++.+|.++|+++ +.|||+|||+++++.. ||+|++|++|+
T Consensus 136 ~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~ 214 (229)
T cd03254 136 NGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN-ADKILVLDDGK 214 (229)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEEeCCe
Confidence 78999999999999999999999999999999999999999999999876 4799999999999975 99999999999
Q ss_pred EEEecCChhhH
Q 048654 395 LHFYRGNFDDF 405 (723)
Q Consensus 395 i~~~~g~~~~~ 405 (723)
++. .|+++++
T Consensus 215 ~~~-~~~~~~~ 224 (229)
T cd03254 215 IIE-EGTHDEL 224 (229)
T ss_pred EEE-eCCHHHH
Confidence 964 5666554
No 491
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4e-35 Score=297.29 Aligned_cols=186 Identities=25% Similarity=0.352 Sum_probs=150.0
Q ss_pred eEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce--------eEEEEc
Q 048654 495 LLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL--------RIGRYS 566 (723)
Q Consensus 495 ~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~--------~ig~~~ 566 (723)
+|+++|+++.|++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|++
T Consensus 2 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (207)
T PRK13539 2 MLEGEDLACVRGGR--VLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLG 79 (207)
T ss_pred EEEEEeEEEEECCe--EEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEec
Confidence 68999999999753 58999999999999999999999999999999999999999999987642 367887
Q ss_pred cccc--cccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEec
Q 048654 567 QHFV--DLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLD 644 (723)
Q Consensus 567 q~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLD 644 (723)
|... ...++.++.. +...... . ....+.++++.+||.... .+++.+|||||||||+|||||+.+|++||||
T Consensus 80 ~~~~~~~~~tv~~~l~-~~~~~~~----~-~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~llllD 152 (207)
T PRK13539 80 HRNAMKPALTVAENLE-FWAAFLG----G-EELDIAAALEAVGLAPLA-HLPFGYLSAGQKRRVALARLLVSNRPIWILD 152 (207)
T ss_pred CCCcCCCCCcHHHHHH-HHHHhcC----C-cHHHHHHHHHHcCCHHHH-cCChhhcCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 6532 1223333221 1111111 1 234578899999997543 4678999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHc---CceEEEEecCHHHHHHhcCcCCCcEEEEEEC
Q 048654 645 EPTNHLDMQSIDALADALDEF---TGGVVLVSHDSRLISRVCDDEERSEIWVVEN 696 (723)
Q Consensus 645 EPT~~LD~~s~~~l~~~L~~~---~~tVIivSHD~~~~~~~~d~~~~drv~vl~~ 696 (723)
|||+|||+.++..+.++|.++ +.|||+||||.+++.. | +++.++.
T Consensus 153 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~--~-----~~~~~~~ 200 (207)
T PRK13539 153 EPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG--A-----RELDLGP 200 (207)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc--C-----cEEeecC
Confidence 999999999999999999876 4699999999999875 3 7777743
No 492
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.2e-35 Score=322.55 Aligned_cols=212 Identities=21% Similarity=0.292 Sum_probs=155.8
Q ss_pred eEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHH
Q 048654 170 NFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEEL 249 (723)
Q Consensus 170 nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~ 249 (723)
||+++|+++.+ |+||+|++|++++|+|||||||||||++|+|+..| ..|+|.+.+.++....... ..
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~---------~~ 70 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGI---------FL 70 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCcccc---------cc
Confidence 89999988764 99999999999999999999999999999998754 4567777666543211000 00
Q ss_pred HHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHHHHHH
Q 048654 250 VKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGWRMRI 329 (723)
Q Consensus 250 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrQRv 329 (723)
...+..++++.+.... .....+.+++...+. .........++.++++.+||.. ..++++.+|||||||||
T Consensus 71 ~~~~~~i~~v~q~~~l------~~~~tv~enl~~~~~---~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LSgGqkqRv 140 (354)
T TIGR02142 71 PPEKRRIGYVFQEARL------FPHLSVRGNLRYGMK---RARPSERRISFERVIELLGIGH-LLGRLPGRLSGGEKQRV 140 (354)
T ss_pred chhhCCeEEEecCCcc------CCCCcHHHHHHHHhh---ccChhHHHHHHHHHHHHcCChh-HhcCChhhCCHHHHHHH
Confidence 0011122332221100 111123333322111 1122233567899999999974 55799999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChhhH
Q 048654 330 SLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW----KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 330 aLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~----~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~~~ 405 (723)
+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++. .|+.+++
T Consensus 141 alAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 219 (354)
T TIGR02142 141 AIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAA-AGPIAEV 219 (354)
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEE-ECCHHHH
Confidence 9999999999999999999999999999999988764 5799999999999999999999999999974 4665544
No 493
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.1e-35 Score=300.89 Aligned_cols=200 Identities=21% Similarity=0.267 Sum_probs=151.6
Q ss_pred cceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 164 KDITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 164 ~~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.+|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|++.| ..|+|.+.+..+.... .
T Consensus 10 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i~~~~---~---- 80 (214)
T PRK13543 10 PLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTATRGD---R---- 80 (214)
T ss_pred ceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEccchh---h----
Confidence 469999999999988999999999999999999999999999999999998754 4566766665442110 0
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCCh
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSG 323 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 323 (723)
...++++.+.... .....+.+++.... .+ ........+.++++.+|+.. ..++++.+|||
T Consensus 81 ---------~~~i~~~~q~~~~------~~~~t~~e~l~~~~-~~---~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~ 140 (214)
T PRK13543 81 ---------SRFMAYLGHLPGL------KADLSTLENLHFLC-GL---HGRRAKQMPGSALAIVGLAG-YEDTLVRQLSA 140 (214)
T ss_pred ---------hhceEEeecCccc------ccCCcHHHHHHHHH-Hh---cCCcHHHHHHHHHHHcCChh-hccCChhhCCH
Confidence 0112222211000 00111222221111 11 11123456788999999974 45789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 324 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 324 GqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||++|||++++.++||++++|+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 141 GQKKRLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999999999999999999999765 68999999999999999999999874
No 494
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=309.93 Aligned_cols=222 Identities=25% Similarity=0.317 Sum_probs=162.0
Q ss_pred ceEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCC---CCCcEEEEEeeeeecCCChHHHHH
Q 048654 165 DITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIP---VPKNIDVLLVEQEVVGDDRSAIQA 241 (723)
Q Consensus 165 ~I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~---~~~~~~i~~~~q~~~~~~~~~~~~ 241 (723)
+|.++||++.|+++++|+++||+|.+|++++|+|+|||||||||++|+|+..+ .|..|.|.+.+..+......
T Consensus 45 ~l~i~nl~~~~~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~---- 120 (305)
T PRK14264 45 KLSVEDLDVYYGDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN---- 120 (305)
T ss_pred eEEEEEEEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc----
Confidence 59999999999999999999999999999999999999999999999998653 25677887776654311100
Q ss_pred HHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHH-----------HhcC-chHHHHHHHHHHHhCCC
Q 048654 242 VVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKL-----------QILG-SDAAEAQASKILAGLGF 309 (723)
Q Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~~-~~~~~~~~~~~L~~lgl 309 (723)
...++..++++.+.... . ...+.+++....... .... ......++.++++.+++
T Consensus 121 -------~~~~~~~i~~v~q~~~l------~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 186 (305)
T PRK14264 121 -------LVELRKRVGMVFQSPNP------F-PKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAAL 186 (305)
T ss_pred -------HHHHhhceEEEccCCcc------c-cccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCC
Confidence 00112223333221110 0 011222222111100 0011 12234668889999987
Q ss_pred Cc---cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhC
Q 048654 310 TK---EMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVC 384 (723)
Q Consensus 310 ~~---~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~ia 384 (723)
.. ...++++.+|||||+|||+|||||+.+|+||||||||++||+.++.+|.++|+++ +.|||+|||+++++..+|
T Consensus 187 ~~~~~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~ 266 (305)
T PRK14264 187 WDEVNDRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARIS 266 (305)
T ss_pred chhhhHHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhc
Confidence 42 2346889999999999999999999999999999999999999999999999876 469999999999999999
Q ss_pred CEE-EEEeCCEEEEecCChhhH
Q 048654 385 TEI-IHLHDQKLHFYRGNFDDF 405 (723)
Q Consensus 385 d~I-i~L~~G~i~~~~g~~~~~ 405 (723)
|++ ++|++|+++. .|+.+++
T Consensus 267 d~i~~~l~~G~i~~-~g~~~~~ 287 (305)
T PRK14264 267 DQTAVFLTGGELVE-YDDTDKI 287 (305)
T ss_pred CEEEEEecCCEEEE-eCCHHHH
Confidence 997 5789999975 4776554
No 495
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-35 Score=283.59 Aligned_cols=200 Identities=29% Similarity=0.441 Sum_probs=163.6
Q ss_pred CeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCcceEEECCce------eEEEEcc
Q 048654 494 PLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKL------RIGRYSQ 567 (723)
Q Consensus 494 ~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p~~G~I~~~~~~------~ig~~~q 567 (723)
+++.+++++.+|++....+|+|+|++|.+||.++++||+|||||||||+++|+.+|+.|+|.++++. .-|.++|
T Consensus 2 ~~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ 81 (259)
T COG4525 2 CMLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQ 81 (259)
T ss_pred ceeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEec
Confidence 4678899999999876678999999999999999999999999999999999999999999988762 4588999
Q ss_pred cc--ccccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCCCCcCCCCCCCHHHHHHHHHHHHHccCCCeEEecc
Q 048654 568 HF--VDLLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDE 645 (723)
Q Consensus 568 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~~~~~~i~~LSGGqkqRv~lAral~~~p~lLlLDE 645 (723)
+. .+.+++.+|. .+-+....- ......+.+.++|..+||.+.. ++.+.+|||||||||.|||||+.+|++|+|||
T Consensus 82 ~~~LlPWl~~~dNv-afgL~l~Gi-~k~~R~~~a~q~l~~VgL~~~~-~~~i~qLSGGmrQRvGiARALa~eP~~LlLDE 158 (259)
T COG4525 82 NEALLPWLNVIDNV-AFGLQLRGI-EKAQRREIAHQMLALVGLEGAE-HKYIWQLSGGMRQRVGIARALAVEPQLLLLDE 158 (259)
T ss_pred cCccchhhHHHHHH-HHHHHhcCC-CHHHHHHHHHHHHHHhCccccc-ccceEeecchHHHHHHHHHHhhcCcceEeecC
Confidence 74 2334444442 222222111 1112345678899999998765 56789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHc----CceEEEEecCHHHHHHhcCcCCCcEEEEEE--CCeEEe
Q 048654 646 PTNHLDMQSIDALADALDEF----TGGVVLVSHDSRLISRVCDDEERSEIWVVE--NGTVSR 701 (723)
Q Consensus 646 PT~~LD~~s~~~l~~~L~~~----~~tVIivSHD~~~~~~~~d~~~~drv~vl~--~G~i~~ 701 (723)
|+.+||.-+++.+.++|-++ +..+++||||++++.-++ +|++||. .|+|++
T Consensus 159 PfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlfla-----trLvvlsp~pgRvv~ 215 (259)
T COG4525 159 PFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLA-----TRLVVLSPGPGRVVE 215 (259)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhh-----heeEEecCCCceeeE
Confidence 99999999999988887654 468999999999999888 4999997 578874
No 496
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=308.52 Aligned_cols=216 Identities=24% Similarity=0.296 Sum_probs=155.5
Q ss_pred ceEEEeEEEEeC-CeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHH
Q 048654 165 DITIDNFSVAAR-GKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVV 243 (723)
Q Consensus 165 ~I~l~nls~~y~-~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~ 243 (723)
.|+++|++++|+ ++++|+|+||+|.+|++++|+|||||||||||++|+|++.| ..|+|.+.+..+... .
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~----~---- 75 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPTRQA----L---- 75 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEhHHh----h----
Confidence 489999999995 57899999999999999999999999999999999998754 456666655443100 0
Q ss_pred HhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHH-HHHHHh--cCchHHHHHHHHHHHhCCCCccccCCCCCC
Q 048654 244 SAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAEL-YEKLQI--LGSDAAEAQASKILAGLGFTKEMQGRPTKS 320 (723)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~--~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 320 (723)
....++++.+....... ......+.+... +..... ........++.++++.+|+.. ..++++.+
T Consensus 76 --------~~~~i~~v~q~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~ 142 (272)
T PRK15056 76 --------QKNLVAYVPQSEEVDWS----FPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVE-FRHRQIGE 142 (272)
T ss_pred --------ccceEEEeccccccccC----CCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChh-HhcCCccc
Confidence 00011222111000000 000001110000 000000 111233456788999999974 45789999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEEE
Q 048654 321 FSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLHF 397 (723)
Q Consensus 321 LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~~ 397 (723)
|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+++++ +|+++.
T Consensus 143 LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~ 221 (272)
T PRK15056 143 LSGGQKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLA 221 (272)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEe
Confidence 9999999999999999999999999999999999999999999865 579999999999999999999887 899864
Q ss_pred ecCChhhH
Q 048654 398 YRGNFDDF 405 (723)
Q Consensus 398 ~~g~~~~~ 405 (723)
.|+.+++
T Consensus 222 -~g~~~~~ 228 (272)
T PRK15056 222 -SGPTETT 228 (272)
T ss_pred -ecCHHhc
Confidence 4666554
No 497
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.7e-35 Score=341.65 Aligned_cols=246 Identities=27% Similarity=0.344 Sum_probs=176.0
Q ss_pred HHhhhhhcccccccccCccccccCCccccCCccceEEEeEEEEeCCe--eeeEeeeEEEeCCcEEEEECCCCccHHHHHH
Q 048654 132 KEALRDDHDAFTVVIGSRTSVLEGQDDADANVKDITIDNFSVAARGK--ELLKSTSVRISHGKRYGLVGPNGMGKSTLLK 209 (723)
Q Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~l~nls~~y~~~--~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk 209 (723)
.++|.+-.+.++...+.... ...+.-...|+++|++|+|+.. ++|+|+||+|++||++||||+||||||||+|
T Consensus 443 ~~rL~dil~~~~E~~~~~~~-----~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~K 517 (709)
T COG2274 443 LERLGDILDTPPEQEGDKTL-----IHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLK 517 (709)
T ss_pred HHHHHHHhcCCccccccccc-----ccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHH
Confidence 35677777777665444320 0112334469999999999765 6999999999999999999999999999999
Q ss_pred HHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH--
Q 048654 210 LLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK-- 287 (723)
Q Consensus 210 ~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 287 (723)
+|+|++.| ..|+|.+.+.++...+.. .+++.++++.+..... .-.+.+++......
T Consensus 518 LL~gly~p--~~G~I~~dg~dl~~i~~~-------------~lR~~ig~V~Q~~~Lf-------~gSI~eNi~l~~p~~~ 575 (709)
T COG2274 518 LLLGLYKP--QQGRILLDGVDLNDIDLA-------------SLRRQVGYVLQDPFLF-------SGSIRENIALGNPEAT 575 (709)
T ss_pred HHhcCCCC--CCceEEECCEeHHhcCHH-------------HHHhheeEEcccchhh-------cCcHHHHHhcCCCCCC
Confidence 99999865 456677777665543332 3455555543321110 00011111000000
Q ss_pred HHhcCchHHHHHHHHHHHhC--CCCccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh
Q 048654 288 LQILGSDAAEAQASKILAGL--GFTKEMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR 365 (723)
Q Consensus 288 l~~~~~~~~~~~~~~~L~~l--gl~~~~~~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~ 365 (723)
...+-.....+-+++++..+ |+.... ......||||||||++|||||+++|+|||||||||+||+.+...+.+.|.+
T Consensus 576 ~e~i~~A~~~ag~~~fI~~lP~gy~t~v-~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~ 654 (709)
T COG2274 576 DEEIIEAAQLAGAHEFIENLPMGYDTPV-GEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQ 654 (709)
T ss_pred HHHHHHHHHHhCcHHHHHhccccccccc-ccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHH
Confidence 00000112234566777776 776443 577889999999999999999999999999999999999999999999998
Q ss_pred cC--cEEEEEeCCHHHHHhhCCEEEEEeCCEEEEecCChhhHHh
Q 048654 366 WK--KTLVVVSHDRDFLNTVCTEIIHLHDQKLHFYRGNFDDFES 407 (723)
Q Consensus 366 ~~--~TVIivsHdl~~l~~iad~Ii~L~~G~i~~~~g~~~~~~~ 407 (723)
+. +|+|+|||+++.+.. ||+|+||++|+|+. .|+.+++..
T Consensus 655 ~~~~~T~I~IaHRl~ti~~-adrIiVl~~Gkiv~-~gs~~ell~ 696 (709)
T COG2274 655 ILQGRTVIIIAHRLSTIRS-ADRIIVLDQGKIVE-QGSHEELLA 696 (709)
T ss_pred HhcCCeEEEEEccchHhhh-ccEEEEccCCceec-cCCHHHHHH
Confidence 74 899999999999986 99999999999974 688777643
No 498
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.3e-35 Score=302.81 Aligned_cols=210 Identities=25% Similarity=0.405 Sum_probs=147.4
Q ss_pred CccceEEEeEEEEeCC---eeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHH
Q 048654 162 NVKDITIDNFSVAARG---KELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA 238 (723)
Q Consensus 162 ~~~~I~l~nls~~y~~---~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~ 238 (723)
...+|+++|++++|++ .++|+|+||+|.+|++++|+||||||||||+++|+|+..| ..|+|.+.+..+.......
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~ 85 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQP--QGGQVLLDGKPISQYEHKY 85 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCcEEEECCCchHHcCHHH
Confidence 4557999999999975 4799999999999999999999999999999999998755 4566666554432111111
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHH--HHhcCchHHHHHHHHHHHhC--CCCcccc
Q 048654 239 IQAVVSAHEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEK--LQILGSDAAEAQASKILAGL--GFTKEMQ 314 (723)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~L~~l--gl~~~~~ 314 (723)
. +..++++.+.... ....+.+++...... ...+........+.++++.+ |+... .
T Consensus 86 ~-------------~~~i~~~~q~~~l-------~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~-~ 144 (226)
T cd03248 86 L-------------HSKVSLVGQEPVL-------FARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTE-V 144 (226)
T ss_pred H-------------HhhEEEEecccHH-------HhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccch-h
Confidence 1 1111111110000 000001111000000 00000001112356778888 77643 4
Q ss_pred CCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CcEEEEEeCCHHHHHhhCCEEEEEeC
Q 048654 315 GRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW--KKTLVVVSHDRDFLNTVCTEIIHLHD 392 (723)
Q Consensus 315 ~~~~~~LSGGqrQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~--~~TVIivsHdl~~l~~iad~Ii~L~~ 392 (723)
++++.+|||||||||+|||||+.+|++|||||||++||+.++.+|.++|+++ +.|||+||||++++.. ||+|++|++
T Consensus 145 ~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~ 223 (226)
T cd03248 145 GEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVER-ADQILVLDG 223 (226)
T ss_pred hcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHh-CCEEEEecC
Confidence 7889999999999999999999999999999999999999999999999875 3699999999999975 999999999
Q ss_pred CEE
Q 048654 393 QKL 395 (723)
Q Consensus 393 G~i 395 (723)
|++
T Consensus 224 g~i 226 (226)
T cd03248 224 GRI 226 (226)
T ss_pred CcC
Confidence 864
No 499
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=6.4e-35 Score=284.78 Aligned_cols=158 Identities=28% Similarity=0.371 Sum_probs=130.6
Q ss_pred eEEEeEEEEeCCeeeeEeeeEEEeCCcEEEEECCCCccHHHHHHHHHhCCCCCCCcEEEEEeeeeecCCChHHHHHHHHh
Q 048654 166 ITIDNFSVAARGKELLKSTSVRISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAIQAVVSA 245 (723)
Q Consensus 166 I~l~nls~~y~~~~vL~~isl~i~~Ge~~~LvG~NGsGKSTLlk~L~G~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 245 (723)
|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+..| ..|+|.+.+..+...+..
T Consensus 1 l~~~~l~~~~~~~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~v~~~g~~~~~~~~~-------- 70 (163)
T cd03216 1 LELRGITKRFGGVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKP--DSGEILVDGKEVSFASPR-------- 70 (163)
T ss_pred CEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEECCcCCHH--------
Confidence 5789999999999999999999999999999999999999999999998754 456666655443211000
Q ss_pred hHHHHHHHHHHHhhhcCcCCCCCCCCCchhhHHHHHHHHHHHHHhcCchHHHHHHHHHHHhCCCCccccCCCCCCCChHH
Q 048654 246 HEELVKLREEVASLQNSTSVDGEEDGDDANDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTKSFSGGW 325 (723)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 325 (723)
.. .-..+++ +.+|||||
T Consensus 71 ----------------------------------------~~---------------~~~~i~~--------~~qLS~G~ 87 (163)
T cd03216 71 ----------------------------------------DA---------------RRAGIAM--------VYQLSVGE 87 (163)
T ss_pred ----------------------------------------HH---------------HhcCeEE--------EEecCHHH
Confidence 00 0000111 11299999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CcEEEEEeCCHHHHHhhCCEEEEEeCCEEE
Q 048654 326 RMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRW---KKTLVVVSHDRDFLNTVCTEIIHLHDQKLH 396 (723)
Q Consensus 326 rQRvaLArAL~~~P~lLLLDEPT~~LD~~~~~~L~~~L~~~---~~TVIivsHdl~~l~~iad~Ii~L~~G~i~ 396 (723)
+||++|||||+.+|++|||||||++||+.++..+.++|+++ +.|||++|||++++..+||++++|++|+++
T Consensus 88 ~qrl~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~ 161 (163)
T cd03216 88 RQMVEIARALARNARLLILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVV 161 (163)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999865 579999999999999999999999999985
No 500
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=303.51 Aligned_cols=208 Identities=25% Similarity=0.270 Sum_probs=164.3
Q ss_pred CCeEEEEEEEEEcCCCcccceeceEEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CcceEEECCc--------
Q 048654 493 PPLLQLIEVSFSYPNREDFKLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSP-----TEGEVRRSQK-------- 559 (723)
Q Consensus 493 ~~~l~~~~ls~~y~~~~~~~L~~isl~i~~Ge~vaIvGpNGsGKSTLlk~L~Gl~~p-----~~G~I~~~~~-------- 559 (723)
++.+.++++++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 6 ~~~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 83 (261)
T PRK14263 6 PIVMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVD 83 (261)
T ss_pred CceEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccc
Confidence 467899999999975 3589999999999999999999999999999999999986 7999987653
Q ss_pred -----eeEEEEcccccc-ccCccccHHHHHHhhCCCCCCCcHHHHHHHHHHhCCCCCC---CCcCCCCCCCHHHHHHHHH
Q 048654 560 -----LRIGRYSQHFVD-LLTMEETPVSYLLRLHPDQEGLSKQEAVRAKLGKFGLPSH---NHLTPIAKLSGGQKARVVF 630 (723)
Q Consensus 560 -----~~ig~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~---~~~~~i~~LSGGqkqRv~l 630 (723)
..++|++|.... ..++.++.... ..... . .......+.++++.+++... ....++.+|||||+||++|
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~-~~~~~-~-~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 84 PVVVRRYIGMVFQQPNPFSMSIFDNVAFG-LRLNR-Y-KGDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hHhhhhceEEEecCCccccccHHHHHHHH-HhhcC-c-hHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHH
Confidence 237899887421 12222222111 11111 0 00123467888999998532 1235678999999999999
Q ss_pred HHHHccCCCeEEeccCCCCCCHHHHHHHHHHHHHcC--ceEEEEecCHHHHHHhcCcCCCcEEEEEE--------CCeEE
Q 048654 631 TSISMSKPHILLLDEPTNHLDMQSIDALADALDEFT--GGVVLVSHDSRLISRVCDDEERSEIWVVE--------NGTVS 700 (723)
Q Consensus 631 Aral~~~p~lLlLDEPT~~LD~~s~~~l~~~L~~~~--~tVIivSHD~~~~~~~~d~~~~drv~vl~--------~G~i~ 700 (723)
||||+.+|+||||||||+|||+.++..+.++|+++. .|||+||||++++..+|| +|++|+ +|+++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d-----~v~~l~~~~~~~~~~G~i~ 235 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVAD-----TTAFFSVDISQGTRTGYLV 235 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCC-----EEEEEecccccccCCceEE
Confidence 999999999999999999999999999999999874 589999999999999995 999996 89998
Q ss_pred ecCCCHHHHHH
Q 048654 701 RFPGTFEEYKE 711 (723)
Q Consensus 701 ~~~g~~~~~~~ 711 (723)
. .|+.+++.+
T Consensus 236 ~-~g~~~~~~~ 245 (261)
T PRK14263 236 E-MGPTAQIFQ 245 (261)
T ss_pred E-eCCHHHHHh
Confidence 5 478777653
Done!