BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048655
         (288 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q02527|MGAT3_RAT Beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase OS=Rattus
           norvegicus GN=Mgat3 PE=1 SV=2
          Length = 538

 Score = 70.5 bits (171), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 19/172 (11%)

Query: 87  YHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNST 146
           Y    T ERL        RE PRRV +A+  + E D+L +R+ EL   +  FV+ ESN T
Sbjct: 194 YSNLPTKERLVP------REVPRRVINAININHEFDLLDVRFHELGDVVDAFVVCESNFT 247

Query: 147 FTGLPKPLFFAS--NRHKFKFVEPRLTYGMI-----GGRFKKGENPFVEEAYQRVAL--D 197
             G P+PL F        F+++  ++ Y  +     GGR    ++ ++ + Y R  L  D
Sbjct: 248 AYGEPRPLKFREMLTNGTFEYIRHKVLYVFLDHFPPGGR----QDGWIADDYLRTFLTQD 303

Query: 198 QLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSF 249
            + R+  +  DD+ I+ D DEIP+   +  L+  D         +R  LY F
Sbjct: 304 GVSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGF 355


>sp|Q09327|MGAT3_HUMAN Beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase OS=Homo sapiens
           GN=MGAT3 PE=2 SV=3
          Length = 533

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 19/172 (11%)

Query: 87  YHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNST 146
           Y    T ERL        RE PRRV +A+  + E D+L +R+ EL   +  FV+ ESN T
Sbjct: 190 YSNLPTKERLVP------REVPRRVINAINVNHEFDLLDVRFHELGDVVDAFVVCESNFT 243

Query: 147 FTGLPKPLFFAS--NRHKFKFVEPRLTYGMI-----GGRFKKGENPFVEEAYQRVAL--D 197
             G P+PL F        F+++  ++ Y  +     GGR    ++ ++ + Y R  L  D
Sbjct: 244 AYGEPRPLKFREMLTNGTFEYIRHKVLYVFLDHFPPGGR----QDGWIADDYLRTFLTQD 299

Query: 198 QLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSF 249
            + R+  +  DD+ I+ D DEIP+   +  L+  D         +R  LY F
Sbjct: 300 GVSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGF 351


>sp|Q10470|MGAT3_MOUSE Beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase OS=Mus musculus
           GN=Mgat3 PE=1 SV=2
          Length = 538

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 19/172 (11%)

Query: 87  YHENVTMERLCKLHGWGIRESPRRVFDAVLFSTEEDILTIRWKELYPFITQFVLLESNST 146
           Y    T ERL        RE PRRV +A+  + E D+L +R+ EL   +  FV+ +SN T
Sbjct: 194 YSNLPTKERLVP------REVPRRVINAININHEFDLLDVRFHELGDVVDAFVVCDSNFT 247

Query: 147 FTGLPKPLFFAS--NRHKFKFVEPRLTYGMI-----GGRFKKGENPFVEEAYQRVAL--D 197
             G P+PL F        F+++  ++ Y  +     GGR    ++ ++ + Y R  L  D
Sbjct: 248 AYGEPRPLKFREMLTNGTFEYIRHKVLYVFLDHFPPGGR----QDGWIADDYLRTFLTQD 303

Query: 198 QLLRIAGIEDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLRNYLYSF 249
            + R+  +  DD+ I+ D DEIP+   +  L+  D         +R  LY F
Sbjct: 304 GVSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGF 355


>sp|Q54U63|LVSC_DICDI BEACH domain-containing protein lvsC OS=Dictyostelium discoideum
            GN=lvsC PE=4 SV=2
          Length = 2491

 Score = 31.6 bits (70), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 17/102 (16%)

Query: 40   DLKTLFFVFVFIPVFI-------FGIYLHGQKISYFLRPLWESPPKPFIKIPHYYHENVT 92
            D+K L   F ++P F+       FGI  +G  I   L P W S P  FI+I     E+  
Sbjct: 1984 DVKELIPEFYYMPEFLTNHNHINFGIKQNGIGIEDVLLPPWASSPSDFIRINREALESDY 2043

Query: 93   MERLCKLHGW-----GIRE---SPRRVFDAVLFSTEEDILTI 126
            +     LH W     GI++     + VF+   + T E  + I
Sbjct: 2044 VS--SHLHEWIDLIFGIKQRGKQAKEVFNVFYYLTYEGSVDI 2083


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.327    0.143    0.460 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,171,446
Number of Sequences: 539616
Number of extensions: 4858316
Number of successful extensions: 12393
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12386
Number of HSP's gapped (non-prelim): 6
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)