Query 048655
Match_columns 288
No_of_seqs 157 out of 193
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 20:29:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048655.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048655hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1omza_ c.68.1.15 (A:) Alpha-1 65.0 23 0.0016 25.9 9.4 100 118-239 12-114 (265)
2 d1jixa_ c.87.1.1 (A:) beta-Glu 54.1 5.3 0.00039 34.1 4.1 44 135-178 59-102 (351)
3 d1udxa3 d.242.1.1 (A:341-416) 53.7 2.7 0.0002 29.7 1.8 21 196-216 48-68 (76)
4 d1wi2a_ b.36.1.1 (A:) PDZ doma 44.6 14 0.001 26.4 4.7 39 202-244 56-97 (104)
5 d2bo4a1 c.68.1.18 (A:2-382) Ma 41.3 62 0.0045 28.5 9.5 106 114-228 4-113 (381)
6 d1ihja_ b.36.1.1 (A:) Inad {Fr 39.0 22 0.0016 24.6 5.0 40 203-245 51-94 (94)
7 d1ll2a_ c.68.1.14 (A:) Glycoge 37.6 8.9 0.00065 31.0 2.8 85 124-221 22-116 (263)
8 d1xhba2 c.68.1.17 (A:95-422) P 30.5 92 0.0067 24.9 8.3 94 116-229 29-129 (328)
9 d1ii7a_ d.159.1.4 (A:) Mre11 { 29.4 36 0.0026 26.8 5.3 40 188-227 21-63 (333)
10 d1ak2a2 g.41.2.1 (A:147-176) M 28.5 11 0.00081 22.3 1.4 17 5-22 10-26 (30)
11 d1vaea_ b.36.1.1 (A:) Rhophili 28.0 23 0.0017 25.6 3.5 38 203-242 52-92 (111)
12 d1ujva_ b.36.1.1 (A:) Membrane 25.2 52 0.0038 22.8 5.0 40 203-243 46-88 (96)
13 d1e4va2 g.41.2.1 (A:122-156) M 25.0 14 0.001 22.4 1.4 17 5-22 15-31 (35)
14 d2i6va1 b.36.1.5 (A:219-305) G 24.1 66 0.0048 21.9 5.3 41 200-241 32-73 (87)
15 d1qava_ b.36.1.1 (A:) Syntroph 23.8 55 0.004 22.5 4.8 39 203-244 46-88 (90)
16 d1wfva_ b.36.1.1 (A:) Membrane 21.5 50 0.0036 23.3 4.2 37 205-244 55-94 (103)
17 d1edmb_ g.3.11.1 (B:) Factor I 20.4 41 0.003 20.2 3.0 20 61-83 20-39 (39)
No 1
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.97 E-value=23 Score=25.93 Aligned_cols=100 Identities=12% Similarity=0.145 Sum_probs=54.9
Q ss_pred CChHHHHHHHHHHhc--ccccEEEEEEeCCCccCCCccccchhchhcccccCCCEEEEEeCCccCCCCCchhhHHHHHHH
Q 048655 118 STEEDILTIRWKELY--PFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEAYQRVA 195 (288)
Q Consensus 118 s~ElDlLEIRL~EL~--dvVD~FVIvESn~TFtG~pKpL~f~~n~~rF~~~~~KIiy~~l~~~~~~~~~~w~~E~~qRn~ 195 (288)
.||-+.|+-=|+.|- ++.|.-|||..+.| .+..+ .-.+.......++++..-+ .. -...||.
T Consensus 12 yn~~~~l~~~l~sl~~q~~~~~~iiV~d~~s-d~~~~-----~i~~~~~~~~~~~~~~~~~-~g---------~~~a~n~ 75 (265)
T d1omza_ 12 YNRTDLLLRLLNHYQAVPSLHKVIVVWNNVG-EKGPE-----ELWNSLGPHPIPVIFKPQT-AN---------KMRNRLQ 75 (265)
T ss_dssp SSCHHHHHHHHHHHTTSTTEEEEEEEECCTT-CCCTH-----HHHHHTCCCSSCEEEEECS-SC---------CGGGGGS
T ss_pred CCCHHHHHHHHHHHHcCCCcCeEEEEECCCC-CccHH-----HHHHHhcccceEEEEecCC-CC---------chhhhhh
Confidence 467778877777776 66777777765544 11111 1122333333333333211 10 1123332
Q ss_pred HHHHHHHcCCCCCcEEEeeCCCcCCCHHHHHH-HHhcCCCCcceE
Q 048655 196 LDQLLRIAGIEDDDLLIMSDVDEIPSAHTINL-LRWCDDIPSILH 239 (288)
Q Consensus 196 l~~~lr~~~~~~dDlIIvSDvDEIP~~~tl~~-Lr~cdg~p~~~~ 239 (288)
++ ....+|.|++.|.|.++.++.|+. ++..+.-|....
T Consensus 76 ---~~---~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v 114 (265)
T d1omza_ 76 ---VF---PEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQII 114 (265)
T ss_dssp ---CC---TTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEE
T ss_pred ---hH---HhCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcce
Confidence 11 124899999999999999999984 444443454433
No 2
>d1jixa_ c.87.1.1 (A:) beta-Glucosyltransferase (DNA-modifying) {Bacteriophage T4 [TaxId: 10665]}
Probab=54.14 E-value=5.3 Score=34.12 Aligned_cols=44 Identities=16% Similarity=0.199 Sum_probs=35.3
Q ss_pred ccEEEEEEeCCCccCCCccccchhchhcccccCCCEEEEEeCCc
Q 048655 135 ITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGR 178 (288)
Q Consensus 135 VD~FVIvESn~TFtG~pKpL~f~~n~~rF~~~~~KIiy~~l~~~ 178 (288)
-|..++|.|...|.|..-.|...+...-.++|++||-|..-+.+
T Consensus 59 ydrlivvnssinffggkpnlailsaqkfmakykskiyylftdir 102 (351)
T d1jixa_ 59 YDRLIVVNSSINFFGGKPNLAILSAQKFMAKYKSKIYYLFTDIR 102 (351)
T ss_dssp CSEEEEECCCCCCCSSSCCHHHHHHHHHHHHCCSCEEEEECSTT
T ss_pred cceEEEEcceeeecCCCCchhhhhHHHHHHHhhceeEEEEeeec
Confidence 58899999999999987777766554445999999999886643
No 3
>d1udxa3 d.242.1.1 (A:341-416) Obg GTP-binding protein C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=53.66 E-value=2.7 Score=29.69 Aligned_cols=21 Identities=24% Similarity=0.531 Sum_probs=17.8
Q ss_pred HHHHHHHcCCCCCcEEEeeCC
Q 048655 196 LDQLLRIAGIEDDDLLIMSDV 216 (288)
Q Consensus 196 l~~~lr~~~~~~dDlIIvSDv 216 (288)
+.+.|+++|+++||.|.+.|.
T Consensus 48 v~~~L~~~Gak~GD~V~Ig~~ 68 (76)
T d1udxa3 48 VEAALRAKGVRAGDLVRIGGL 68 (76)
T ss_dssp HHHHHHTTTCCTTCEEEETTE
T ss_pred hHHHHHHcCCCCCCEEEECCE
Confidence 445788899999999999885
No 4
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=44.60 E-value=14 Score=26.41 Aligned_cols=39 Identities=18% Similarity=0.443 Sum_probs=31.5
Q ss_pred HcCCCCCcEEEee---CCCcCCCHHHHHHHHhcCCCCcceEEEeee
Q 048655 202 IAGIEDDDLLIMS---DVDEIPSAHTINLLRWCDDIPSILHLQLRN 244 (288)
Q Consensus 202 ~~~~~~dDlIIvS---DvDEIP~~~tl~~Lr~cdg~p~~~~l~lr~ 244 (288)
.+|++++|.||.= |+......+++++||.|. .++|..+.
T Consensus 56 ~~GL~~GD~Il~VNg~~v~~~~~~ev~~llk~~~----~v~l~V~~ 97 (104)
T d1wi2a_ 56 RAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAR----EISMRVRF 97 (104)
T ss_dssp HHTCCTTCEEEEETTEECSSCCHHHHHHHHHHSS----SEEEEEEC
T ss_pred hcccccCCEEEEECCEECCCCCHHHHHHHHhcCC----eEEEEEEE
Confidence 3589999999976 678888899999999875 46666654
No 5
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=41.29 E-value=62 Score=28.53 Aligned_cols=106 Identities=11% Similarity=-0.028 Sum_probs=54.9
Q ss_pred EEecCCh---HHHHHHHHHHhcccccEEEEEEeCCCccCCCccccchhchhcccccCCCEEEEEeCCccCCCCCchhhHH
Q 048655 114 AVLFSTE---EDILTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFKKGENPFVEEA 190 (288)
Q Consensus 114 ~flfs~E---lDlLEIRL~EL~dvVD~FVIvESn~TFtG~pKpL~f~~n~~rF~~~~~KIiy~~l~~~~~~~~~~w~~E~ 190 (288)
++.|.|| +-...+|+..-.+.++..||+....+=|... .+....+-....+..+...+...... ..--.-.
T Consensus 4 VIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~----i~~~~~~~~~~~~~~v~~~~~~~l~~--~~~GKG~ 77 (381)
T d2bo4a1 4 VFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEA----VERAAPEISRATGTPVSVRLQERLGT--LRPGKGD 77 (381)
T ss_dssp EEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHH----HHHHHHHHHHHHSCCEEEEECCCCSS--SSSSHHH
T ss_pred EEEcCCCcHHHHHHHHHHHHhCCCeeEEEEEcCCCCCcHHH----HHHHhhhhhccccccchhhhhccccc--ccCCCcH
Confidence 4556776 3344557777889999999998877743221 00000000001111112122111100 0001223
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEeeCCCc-CCCHHHHHHH
Q 048655 191 YQRVALDQLLRIAGIEDDDLLIMSDVDE-IPSAHTINLL 228 (288)
Q Consensus 191 ~qRn~l~~~lr~~~~~~dDlIIvSDvDE-IP~~~tl~~L 228 (288)
..+.++..+++. ..+|+|++-|+|= =+.|+.+..|
T Consensus 78 g~~~A~~~g~~~---a~gd~lvflDADl~~~~pe~i~~L 113 (381)
T d2bo4a1 78 GMNTALRYFLEE---TQWERIHFYDADITSFGPDWITKA 113 (381)
T ss_dssp HHHHHHHHHHHH---CCCSEEEECCTTCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHh---CCCCEEEEEcCCcCcCCHHHHHHH
Confidence 445566665553 5799999999994 5678876644
No 6
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=39.04 E-value=22 Score=24.59 Aligned_cols=40 Identities=20% Similarity=0.415 Sum_probs=32.5
Q ss_pred cC-CCCCcEEEee---CCCcCCCHHHHHHHHhcCCCCcceEEEeeee
Q 048655 203 AG-IEDDDLLIMS---DVDEIPSAHTINLLRWCDDIPSILHLQLRNY 245 (288)
Q Consensus 203 ~~-~~~dDlIIvS---DvDEIP~~~tl~~Lr~cdg~p~~~~l~lr~y 245 (288)
+| ++++|.|+-= |+...+..+++++||.+. ..++|..+.|
T Consensus 51 ~G~L~~GD~Il~VNg~~v~~~~~~~~~~ll~~~~---~~v~L~V~R~ 94 (94)
T d1ihja_ 51 CGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEAD---FKIELEIQTF 94 (94)
T ss_dssp HCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSC---SEEEEEEEEC
T ss_pred hCCCChhcEEEEECCEECCCCCHHHHHHHHHcCC---CEEEEEEEeC
Confidence 45 8999999875 678889999999999864 4788887764
No 7
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=37.59 E-value=8.9 Score=31.01 Aligned_cols=85 Identities=15% Similarity=0.101 Sum_probs=39.4
Q ss_pred HHHHHHHhcccccEEEEEEeCCCccCCCccccchhchhcccccCCCEEEEEeCCccC-----CCCCchhhHHHHHHHHHH
Q 048655 124 LTIRWKELYPFITQFVLLESNSTFTGLPKPLFFASNRHKFKFVEPRLTYGMIGGRFK-----KGENPFVEEAYQRVALDQ 198 (288)
Q Consensus 124 LEIRL~EL~dvVD~FVIvESn~TFtG~pKpL~f~~n~~rF~~~~~KIiy~~l~~~~~-----~~~~~w~~E~~qRn~l~~ 198 (288)
|-.-|.+.....|.+|++-...+ ++++++++....+++.+..-..+. ...+.|..+.+.|=.+.+
T Consensus 22 l~~SL~~~~~~~~~vvl~~~~i~----------~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ty~Kl~i~~ 91 (263)
T d1ll2a_ 22 LGSSLKQHRTSRRLAVLTTPQVS----------DTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWS 91 (263)
T ss_dssp HHHHHHHTTCCSEEEEEECTTSC----------HHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGHHHHHHGGGGG
T ss_pred HHHHHHHHCCCCCEEEEECCCCC----------HHHHHHHHHhCCcceeEEeecCcchhhhhhhccccchhhhHHHHHhh
Confidence 34445555666666555533222 223333444444444443211110 022344455555544443
Q ss_pred HHHHcCCC-----CCcEEEeeCCCcCCC
Q 048655 199 LLRIAGIE-----DDDLLIMSDVDEIPS 221 (288)
Q Consensus 199 ~lr~~~~~-----~dDlIIvSDvDEIP~ 221 (288)
+ .... |.|+|+..|+||+-.
T Consensus 92 l---~~ydkvlYLDaD~lv~~~id~Lf~ 116 (263)
T d1ll2a_ 92 L---TQYSKCVFMDADTLVLANIDDLFE 116 (263)
T ss_dssp C---TTCSEEEEECTTEEECSCCGGGGG
T ss_pred h---cccceEEEeCCCEEEecCHHHHhc
Confidence 2 1222 777777777777643
No 8
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.51 E-value=92 Score=24.89 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=53.9
Q ss_pred ecCCh-HHHHHHHHHHhc----cc-ccEEEEEEeCCCccCCCccccchhchhc-ccccCCCEEEEEeCCccCCCCCchhh
Q 048655 116 LFSTE-EDILTIRWKELY----PF-ITQFVLLESNSTFTGLPKPLFFASNRHK-FKFVEPRLTYGMIGGRFKKGENPFVE 188 (288)
Q Consensus 116 lfs~E-lDlLEIRL~EL~----dv-VD~FVIvESn~TFtG~pKpL~f~~n~~r-F~~~~~KIiy~~l~~~~~~~~~~w~~ 188 (288)
...|| .+.|+--|+.+- +. ....|||..+.|-.- ..+..+. .+.+..+|.++..+.. .+.
T Consensus 29 p~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~------~~~~l~~~~~~~~~~i~vi~~~~n-----~G~-- 95 (328)
T d1xhba2 29 VFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF------LKRPLESYVKKLKVPVHVIRMEQR-----SGL-- 95 (328)
T ss_dssp EESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGG------GTHHHHHHHHSSSSCEEEEECSSC-----CCH--
T ss_pred eccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhh------HHHHHHHHHHhcCCCeEEEEeccc-----ccc--
Confidence 34455 566654455443 22 347899997766211 1111222 2456677777665421 122
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeeCCCcCCCHHHHHHHH
Q 048655 189 EAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSAHTINLLR 229 (288)
Q Consensus 189 E~~qRn~l~~~lr~~~~~~dDlIIvSDvDEIP~~~tl~~Lr 229 (288)
+..|| .+++. ..+|+|++.|.|-++.|..|..|-
T Consensus 96 -~~a~N---~Gi~~---a~gd~i~flD~D~~~~p~~l~~l~ 129 (328)
T d1xhba2 96 -IRARL---KGAAV---SRGQVITFLDAHCECTAGWLEPLL 129 (328)
T ss_dssp -HHHHH---HHHHH---CCSSEEEEEESSEEECTTCHHHHH
T ss_pred -hHHHH---HHHHh---hhcceeeecCcccccChhHHHHHH
Confidence 12333 34443 479999999999999999887544
No 9
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=29.44 E-value=36 Score=26.81 Aligned_cols=40 Identities=30% Similarity=0.284 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHHHc-CCCCCcEEEeeCC--CcCCCHHHHHH
Q 048655 188 EEAYQRVALDQLLRIA-GIEDDDLLIMSDV--DEIPSAHTINL 227 (288)
Q Consensus 188 ~E~~qRn~l~~~lr~~-~~~~dDlIIvSDv--DEIP~~~tl~~ 227 (288)
++..+..++.+++..+ .-++|=||+.+|+ +.-|+++++..
T Consensus 21 ~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~ 63 (333)
T d1ii7a_ 21 REEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKK 63 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHH
Confidence 4455566666655432 1245668888898 56678777664
No 10
>d1ak2a2 g.41.2.1 (A:147-176) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=28.46 E-value=11 Score=22.26 Aligned_cols=17 Identities=12% Similarity=0.219 Sum_probs=12.6
Q ss_pred CCccccCcccccccccCC
Q 048655 5 YYSSKKTDDICEDVCGQA 22 (288)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (288)
.|+.-|.+++|+ +||.+
T Consensus 10 ~f~PPk~~g~cD-~cg~~ 26 (30)
T d1ak2a2 10 EFNPPKEPMKDD-ITGEP 26 (30)
T ss_dssp TTBCCSSTTBCT-TTCCB
T ss_pred cccCCCCCCccC-CCCCC
Confidence 477889999994 67653
No 11
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.98 E-value=23 Score=25.62 Aligned_cols=38 Identities=16% Similarity=0.336 Sum_probs=29.0
Q ss_pred cCCCCCcEEEee---CCCcCCCHHHHHHHHhcCCCCcceEEEe
Q 048655 203 AGIEDDDLLIMS---DVDEIPSAHTINLLRWCDDIPSILHLQL 242 (288)
Q Consensus 203 ~~~~~dDlIIvS---DvDEIP~~~tl~~Lr~cdg~p~~~~l~l 242 (288)
+|++++|.|+-= +|...+-.+++++||.|. ...++|..
T Consensus 52 ~GL~~GD~Il~INg~~v~~~~~~ev~~llk~~~--~~~v~l~v 92 (111)
T d1vaea_ 52 AGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFG--GEEVEMKV 92 (111)
T ss_dssp HHCCTTCEEEEETTEECSSCCHHHHHHHHHHTT--TSEECEEE
T ss_pred cccCcccEEEEECCEEcCCCCHHHHHHHHHcCC--CCeEEEEE
Confidence 578999999974 467788899999999985 33455543
No 12
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.22 E-value=52 Score=22.78 Aligned_cols=40 Identities=23% Similarity=0.484 Sum_probs=31.5
Q ss_pred cCCCCCcEEEee---CCCcCCCHHHHHHHHhcCCCCcceEEEee
Q 048655 203 AGIEDDDLLIMS---DVDEIPSAHTINLLRWCDDIPSILHLQLR 243 (288)
Q Consensus 203 ~~~~~dDlIIvS---DvDEIP~~~tl~~Lr~cdg~p~~~~l~lr 243 (288)
++++++|.|+-= |+......+++++||.|. -...++|..+
T Consensus 46 ~~L~~GD~Il~VNg~~v~~~t~~evv~~lk~~~-~g~~v~l~v~ 88 (96)
T d1ujva_ 46 PGLCEGDLIVEINQQNVQNLSHTEVVDILKDCP-IGSETSLIIH 88 (96)
T ss_dssp TTCCSSCEEEEETTEECSSCCHHHHHHHHHHSC-TTSEEEEEEE
T ss_pred cCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CCCEEEEEEE
Confidence 578999999975 578888899999999985 3456776654
No 13
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=24.95 E-value=14 Score=22.39 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=12.6
Q ss_pred CCccccCcccccccccCC
Q 048655 5 YYSSKKTDDICEDVCGQA 22 (288)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (288)
+|+..|.+++| |+||.+
T Consensus 15 ~~~PPk~~g~C-D~cg~~ 31 (35)
T d1e4va2 15 KFNPPKVEGKD-DVTGEE 31 (35)
T ss_dssp TTBCCSSTTBC-TTTCCB
T ss_pred ccCccccCCcc-cCCCCE
Confidence 46778999999 477653
No 14
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C, EpsC {Vibrio cholerae [TaxId: 666]}
Probab=24.06 E-value=66 Score=21.90 Aligned_cols=41 Identities=12% Similarity=0.258 Sum_probs=28.7
Q ss_pred HHHcCCCCCcEEEeeCCCcCCCHHHHHH-HHhcCCCCcceEEE
Q 048655 200 LRIAGIEDDDLLIMSDVDEIPSAHTINL-LRWCDDIPSILHLQ 241 (288)
Q Consensus 200 lr~~~~~~dDlIIvSDvDEIP~~~tl~~-Lr~cdg~p~~~~l~ 241 (288)
..++|++++|+|+--|=-.|-+++.+.. ++.-. -.+.+.+.
T Consensus 32 ~~~aGl~~GDiI~~ing~~v~~~~~~~~~~~~~~-~~~~~~l~ 73 (87)
T d2i6va1 32 FESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMN-EMTEMSLT 73 (87)
T ss_dssp HHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGG-GCSEEEEE
T ss_pred HHHCCCCCCCEEEEECCEEeecHHHHHHHHHhhc-cccccEEE
Confidence 4568999999999999999998886654 43322 23455544
No 15
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.84 E-value=55 Score=22.50 Aligned_cols=39 Identities=10% Similarity=0.182 Sum_probs=31.7
Q ss_pred cC-CCCCcEEEee---CCCcCCCHHHHHHHHhcCCCCcceEEEeee
Q 048655 203 AG-IEDDDLLIMS---DVDEIPSAHTINLLRWCDDIPSILHLQLRN 244 (288)
Q Consensus 203 ~~-~~~dDlIIvS---DvDEIP~~~tl~~Lr~cdg~p~~~~l~lr~ 244 (288)
+| ++++|.|+-= ++.-++..+++.+||.+. ..++|..++
T Consensus 46 ~G~L~~GD~Il~INg~~v~~~~~~~~~~~l~~~~---~~v~l~v~~ 88 (90)
T d1qava_ 46 TEALFVGDAILSVNGEDLSSATHDEAVQALKKTG---KEVVLEVKY 88 (90)
T ss_dssp TTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCC---SEEEEEEEE
T ss_pred CCCCCccCEEEEECCEECCCCCHHHHHHHHHhCC---CeEEEEEEE
Confidence 46 8999988864 678899999999999875 368887765
No 16
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.46 E-value=50 Score=23.32 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=30.3
Q ss_pred CCCCcEEEeeC---CCcCCCHHHHHHHHhcCCCCcceEEEeee
Q 048655 205 IEDDDLLIMSD---VDEIPSAHTINLLRWCDDIPSILHLQLRN 244 (288)
Q Consensus 205 ~~~dDlIIvSD---vDEIP~~~tl~~Lr~cdg~p~~~~l~lr~ 244 (288)
++++|.|+-=| +...+..+++++||.| +..++|.++.
T Consensus 55 L~~GD~Il~INg~~v~~~s~~ev~~~l~~~---~~~v~l~v~R 94 (103)
T d1wfva_ 55 MRVGDQIIEINGESTRDMTHARAIELIKSG---GRRVRLLLKR 94 (103)
T ss_dssp SCTTCEEEEETTEECSSCCHHHHHHHHHHH---CSEECEEEEC
T ss_pred CCCCCEEEEECCEECCCCcHHHHHHHHHcC---CCEEEEEEEE
Confidence 89999999887 8899999999999986 3466666543
No 17
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.37 E-value=41 Score=20.23 Aligned_cols=20 Identities=5% Similarity=-0.036 Sum_probs=15.9
Q ss_pred eceeEeeecCCCCCCCCCCCCCc
Q 048655 61 HGQKISYFLRPLWESPPKPFIKI 83 (288)
Q Consensus 61 ~~~~~~~~~rp~W~~p~~p~~~i 83 (288)
.+...+|.|.|+|.|+. |.|
T Consensus 20 ~~~~y~C~C~~g~~G~~---Cei 39 (39)
T d1edmb_ 20 DINSYECWCPFGFEGKN---CEL 39 (39)
T ss_dssp ETTEEEEECCTTCCSTT---SCC
T ss_pred CCCCEEEECCCCCCCCC---CCC
Confidence 34568999999999987 654
Done!