BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048658
         (83 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9VKV8|U0468_DROME UPF0468 protein CG5343 OS=Drosophila melanogaster GN=CG5343 PE=1
           SV=1
          Length = 199

 Score =  139 bits (350), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 60/73 (82%), Positives = 69/73 (94%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLD+GWNQIQ NL+DFTRRAYGTNYVETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL PEF
Sbjct: 169 DRLYSEDELPPEF 181


>sp|Q6PBJ2|CP080_DANRE UPF0468 protein C16orf80 homolog OS=Danio rerio GN=zgc:73380 PE=2
           SV=1
          Length = 192

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 68/73 (93%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL  EF
Sbjct: 169 DRLYSEDELPAEF 181


>sp|Q6GL74|CP080_XENTR UPF0468 protein C16orf80 homolog OS=Xenopus tropicalis PE=2 SV=1
          Length = 193

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 68/73 (93%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL  EF
Sbjct: 169 DRLYSEDELPAEF 181


>sp|Q6GPY6|CP080_XENLA UPF0468 protein C16orf80 homolog OS=Xenopus laevis PE=2 SV=1
          Length = 193

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 68/73 (93%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL  EF
Sbjct: 169 DRLYSEDELPAEF 181


>sp|Q5ZHP3|CP080_CHICK UPF0468 protein C16orf80 homolog OS=Gallus gallus GN=RCJMB04_34o2
           PE=2 SV=1
          Length = 193

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 68/73 (93%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL  EF
Sbjct: 169 DRLYSEDELPAEF 181


>sp|Q8BTU1|CP080_MOUSE UPF0468 protein C16orf80 homolog OS=Mus musculus GN=Gtl3 PE=2 SV=1
          Length = 193

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 68/73 (93%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL  EF
Sbjct: 169 DRLYSEDELPAEF 181


>sp|Q6B857|CP080_BOVIN UPF0468 protein C16orf80 homolog OS=Bos taurus PE=2 SV=1
          Length = 193

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 68/73 (93%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL  EF
Sbjct: 169 DRLYSEDELPAEF 181


>sp|Q9Y6A4|CP080_HUMAN UPF0468 protein C16orf80 OS=Homo sapiens GN=C16orf80 PE=1 SV=1
          Length = 193

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 67/73 (91%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL DFTRRAYGTNY+ETLRVQ+HAN R+RR+YFS
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFS 168

Query: 70  DRLYSEEELTPEF 82
           DRLYSE+EL  EF
Sbjct: 169 DRLYSEDELPAEF 181


>sp|Q86D25|CP080_CAEEL UPF0468 protein C16orf80 homolog OS=Caenorhabditis elegans
           GN=C54C6.6 PE=3 SV=1
          Length = 203

 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 67/73 (91%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HAN R+RR+YF+
Sbjct: 109 QSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFA 168

Query: 70  DRLYSEEELTPEF 82
           DRLY+E+EL  EF
Sbjct: 169 DRLYTEDELPAEF 181


>sp|Q61JK7|CP080_CAEBR UPF0468 protein C16orf80 homolog OS=Caenorhabditis briggsae
           GN=CBG09753 PE=3 SV=1
          Length = 203

 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 67/73 (91%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANYRLRRIYFS 69
           Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HAN R+RR+YF+
Sbjct: 109 QSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFA 168

Query: 70  DRLYSEEELTPEF 82
           DRLY+E+EL  EF
Sbjct: 169 DRLYTEDELPAEF 181


>sp|Q499T7|CP080_RAT UPF0468 protein C16orf80 homolog OS=Rattus norvegicus GN=Gtl3 PE=2
           SV=1
          Length = 164

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/36 (83%), Positives = 34/36 (94%)

Query: 10  QAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAY 45
           Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAY
Sbjct: 109 QSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAY 144


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.138    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,634,241
Number of Sequences: 539616
Number of extensions: 942854
Number of successful extensions: 2064
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2053
Number of HSP's gapped (non-prelim): 11
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)