Your job contains 1 sequence.
>048660
MNMKQYLQIFEPICVQFKPYKSQKSCSTTLNSPPRPQCTGAPTQRFPFAYSLTQTHNILT
KTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKV
TAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVP
VVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048660
(213 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170723 - symbol:ARR6 "response regulator 6" s... 492 5.4e-47 1
TAIR|locus:2097870 - symbol:RR5 "response regulator 5" sp... 488 1.4e-46 1
TAIR|locus:2027237 - symbol:ARR15 "response regulator 15"... 471 9.1e-45 1
TAIR|locus:2194584 - symbol:ARR4 "response regulator 4" s... 468 1.9e-44 1
TAIR|locus:2011286 - symbol:ARR7 "response regulator 7" s... 465 3.9e-44 1
TAIR|locus:2025911 - symbol:ARR3 "response regulator 3" s... 461 1.0e-43 1
TAIR|locus:2102509 - symbol:RR17 "response regulator 17" ... 410 2.6e-38 1
TAIR|locus:2080590 - symbol:ARR9 "response regulator 9" s... 397 6.3e-37 1
TAIR|locus:2040282 - symbol:RR3 "response regulator 3" sp... 391 2.7e-36 1
UNIPROTKB|Q4GZK2 - symbol:rr9 "Type A response regulator ... 379 5.1e-35 1
UNIPROTKB|Q4GZK7 - symbol:rr4 "Type A response regulator ... 361 4.1e-33 1
UNIPROTKB|Q4GZK5 - symbol:rr6 "Type A response regulator ... 343 3.3e-31 1
UNIPROTKB|Q4GZK8 - symbol:rr3 "Type A response regulator ... 317 1.9e-28 1
UNIPROTKB|Q4GZK4 - symbol:rr7 "Type A response regulator ... 277 3.3e-24 1
UNIPROTKB|Q4GZL0 - symbol:rr1 "Type A response regulator ... 255 7.0e-22 1
UNIPROTKB|Q4GZK3 - symbol:rr8 "Type A response regulator ... 243 1.3e-20 1
UNIPROTKB|Q4GZK9 - symbol:rr2 "Type A response regulator ... 189 6.9e-15 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 171 4.0e-12 1
TIGR_CMR|GSU_1285 - symbol:GSU_1285 "sensory box sensor h... 174 4.3e-12 1
UNIPROTKB|P71403 - symbol:cheY "Chemotaxis protein CheY h... 152 5.8e-11 1
DICTYBASE|DDB_G0284331 - symbol:regA "response regulator ... 163 6.8e-11 1
UNIPROTKB|Q4KG39 - symbol:cheY "Chemotaxis protein CheY" ... 143 5.2e-10 1
TIGR_CMR|CPS_1520 - symbol:CPS_1520 "chemotaxis protein C... 143 5.2e-10 1
TIGR_CMR|CJE_1261 - symbol:CJE_1261 "chemotaxis protein C... 142 6.6e-10 1
UNIPROTKB|P0AE67 - symbol:cheY species:83333 "Escherichia... 141 8.4e-10 1
UNIPROTKB|Q48GG3 - symbol:cheY2 "Chemotaxis protein CheY"... 141 8.4e-10 1
TIGR_CMR|SO_3209 - symbol:SO_3209 "chemotaxis protein Che... 139 1.4e-09 1
TIGR_CMR|CPS_3950 - symbol:CPS_3950 "response regulator/G... 154 1.5e-09 1
UNIPROTKB|Q9KQD5 - symbol:VC_2065 "Chemotaxis protein Che... 138 1.8e-09 1
TIGR_CMR|GSU_2535 - symbol:GSU_2535 "response regulator" ... 138 1.8e-09 1
TIGR_CMR|VC_2065 - symbol:VC_2065 "chemotaxis protein Che... 138 1.8e-09 1
TAIR|locus:2054895 - symbol:AT2G07440 species:3702 "Arabi... 136 2.9e-09 1
TIGR_CMR|GSU_2219 - symbol:GSU_2219 "response regulator" ... 131 1.0e-08 1
UNIPROTKB|Q3ADA5 - symbol:cheY2 "Chemotaxis protein CheY"... 130 1.3e-08 1
TIGR_CMR|CHY_1032 - symbol:CHY_1032 "chemotaxis protein C... 130 1.3e-08 1
UNIPROTKB|Q55169 - symbol:rcp1 "Response regulator rcp1" ... 127 3.1e-08 1
UNIPROTKB|Q74AX6 - symbol:cheY40H-1 "Response receiver Ch... 127 3.1e-08 1
TIGR_CMR|GSU_2223 - symbol:GSU_2223 "chemotaxis protein C... 127 3.1e-08 1
UNIPROTKB|Q747K4 - symbol:GSU3261 "Response regulator, pu... 125 5.4e-08 1
TIGR_CMR|GSU_3261 - symbol:GSU_3261 "response regulator" ... 125 5.4e-08 1
TIGR_CMR|GSU_1117 - symbol:GSU_1117 "response regulator" ... 124 7.1e-08 1
TIGR_CMR|GSU_2287 - symbol:GSU_2287 "response regulator" ... 124 7.1e-08 1
TIGR_CMR|CJE_1664 - symbol:CJE_1664 "DNA-binding response... 136 9.8e-08 1
UNIPROTKB|Q9KKK8 - symbol:VC_A1096 "Chemotaxis protein Ch... 122 1.2e-07 1
TIGR_CMR|VC_A1096 - symbol:VC_A1096 "chemotaxis protein C... 122 1.2e-07 1
TIGR_CMR|GSU_1671 - symbol:GSU_1671 "response regulator/G... 139 1.3e-07 1
TIGR_CMR|GSU_0598 - symbol:GSU_0598 "sigma-54 dependent D... 141 1.5e-07 1
UNIPROTKB|Q8EC92 - symbol:cheV "Chemotaxis signal transdu... 138 1.6e-07 1
TIGR_CMR|SO_3252 - symbol:SO_3252 "chemotaxis protein Che... 138 1.6e-07 1
UNIPROTKB|Q7D1A8 - symbol:cheY "Chemotaxis receiver prote... 121 1.6e-07 1
NCBI_NP|NP_353545.1 - symbol:cheY "chemotaxisreceiverprot... 121 1.6e-07 1
TIGR_CMR|GSU_1316 - symbol:GSU_1316 "response regulator" ... 138 1.8e-07 1
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 142 2.1e-07 1
UNIPROTKB|Q8EEQ6 - symbol:cheY "Chemotaxis signal transdu... 120 2.1e-07 1
TIGR_CMR|SO_2318 - symbol:SO_2318 "chemotaxis protein Che... 120 2.1e-07 1
UNIPROTKB|Q48P87 - symbol:pilG "Type IV pilus response re... 119 2.8e-07 1
UNIPROTKB|Q8EF67 - symbol:cheY "Chemotaxis signal transdu... 119 2.8e-07 1
TIGR_CMR|GSU_2212 - symbol:GSU_2212 "chemotaxis protein C... 119 2.8e-07 1
TIGR_CMR|SO_2120 - symbol:SO_2120 "chemotaxis protein Che... 119 2.8e-07 1
TIGR_CMR|BA_3261 - symbol:BA_3261 "DNA-binding response r... 132 3.6e-07 1
UNIPROTKB|Q3ADB1 - symbol:cheY1 "Chemotaxis protein CheY"... 118 3.7e-07 1
TIGR_CMR|CHY_1026 - symbol:CHY_1026 "chemotaxis protein C... 118 3.7e-07 1
TIGR_CMR|GSU_0403 - symbol:GSU_0403 "chemotaxis protein C... 118 3.7e-07 1
UNIPROTKB|Q0PBM1 - symbol:cheV "Chemotaxis protein" speci... 129 3.8e-07 2
TIGR_CMR|CJE_0333 - symbol:CJE_0333 "chemotaxis protein C... 129 3.8e-07 2
DICTYBASE|DDB_G0282927 - symbol:dhkL "histidine kinase L"... 143 4.5e-07 1
UNIPROTKB|Q9WYT9 - symbol:TM_0468 "Response regulator" sp... 117 4.8e-07 1
TIGR_CMR|CPS_3065 - symbol:CPS_3065 "DNA-binding response... 131 6.0e-07 1
TIGR_CMR|GSU_0104 - symbol:GSU_0104 "response regulator, ... 116 6.2e-07 1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 138 6.6e-07 1
TIGR_CMR|GSU_1038 - symbol:GSU_1038 "sensory box histidin... 136 7.9e-07 1
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 137 8.7e-07 1
ASPGD|ASPL0000016988 - symbol:srrC species:162425 "Emeric... 121 9.6e-07 1
TIGR_CMR|SO_3457 - symbol:SO_3457 "sensor histidine kinas... 138 9.8e-07 1
UNIPROTKB|Q52879 - symbol:cheY1 "CheY1" species:382 "Sino... 114 1.1e-06 1
UNIPROTKB|Q74DM7 - symbol:cheY34H-1 "Response receiver Ch... 114 1.1e-06 1
TIGR_CMR|GSU_1289 - symbol:GSU_1289 "chemotaxis protein C... 114 1.1e-06 1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 135 1.1e-06 1
TIGR_CMR|BA_0994 - symbol:BA_0994 "response regulator" sp... 133 1.1e-06 1
UNIPROTKB|Q9KS16 - symbol:VC_1445 "Sensor histidine kinas... 135 1.3e-06 1
TIGR_CMR|VC_1445 - symbol:VC_1445 "sensor histidine kinas... 135 1.3e-06 1
TIGR_CMR|BA_0996 - symbol:BA_0996 "sensor histidine kinas... 136 1.7e-06 1
UNIPROTKB|Q9KRI8 - symbol:VC_1653 "Sensory box sensor his... 136 2.3e-06 1
TIGR_CMR|VC_1653 - symbol:VC_1653 "sensory box sensor his... 136 2.3e-06 1
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 133 2.4e-06 1
TIGR_CMR|SPO_1953 - symbol:SPO_1953 "phosphate regulon tr... 126 2.4e-06 1
UNIPROTKB|Q0C4H5 - symbol:cheY "Chemotaxis protein CheY" ... 110 3.1e-06 1
TIGR_CMR|GSU_1286 - symbol:GSU_1286 "chemotaxis protein C... 110 3.1e-06 1
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 132 3.4e-06 1
UNIPROTKB|Q48ND2 - symbol:cheY1 "Chemotaxis protein CheY"... 109 4.0e-06 1
UNIPROTKB|Q9KPC0 - symbol:VC_2453 "Sensor histidine kinas... 133 4.3e-06 1
TIGR_CMR|VC_2453 - symbol:VC_2453 "sensor histidine kinas... 133 4.3e-06 1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 130 5.0e-06 1
TIGR_CMR|BA_5581 - symbol:BA_5581 "stage 0 sporulation pr... 108 5.2e-06 1
UNIPROTKB|Q0PBM2 - symbol:cheA "Chemotaxis histidine kina... 131 6.0e-06 1
UNIPROTKB|Q5HWI3 - symbol:cheA "Chemotaxis protein CheA" ... 131 6.0e-06 1
TIGR_CMR|CJE_0332 - symbol:CJE_0332 "chemotaxis protein C... 131 6.0e-06 1
UNIPROTKB|Q0BZW4 - symbol:pleD "Response regulator PleD" ... 128 6.6e-06 1
TIGR_CMR|GSU_2693 - symbol:GSU_2693 "response regulator" ... 107 6.8e-06 1
TIGR_CMR|GSU_1658 - symbol:GSU_1658 "response regulator/G... 127 8.8e-06 1
WARNING: Descriptions of 110 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2170723 [details] [associations]
symbol:ARR6 "response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009536 GO:GO:0006355 GO:GO:0006351 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2684027
EMBL:AB008489 EMBL:AB008491 EMBL:AB009053 EMBL:BT004799
IPI:IPI00547780 PIR:T50857 PIR:T50860 RefSeq:NP_201097.1
UniGene:At.24207 ProteinModelPortal:Q9ZWS6 SMR:Q9ZWS6 IntAct:Q9ZWS6
STRING:Q9ZWS6 EnsemblPlants:AT5G62920.1 GeneID:836412
KEGG:ath:AT5G62920 GeneFarm:4123 TAIR:At5g62920 InParanoid:Q9ZWS6
OMA:DDSQEIK PhylomeDB:Q9ZWS6 Genevestigator:Q9ZWS6
GermOnline:AT5G62920 Uniprot:Q9ZWS6
Length = 186
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 95/120 (79%), Positives = 111/120 (92%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS+VDRK IERLL++SSCKVT V+S TRALQYLGLD E+ +VGF+ LKVNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLKKIKESS FREVPVVIMSSE++L +ID CLEEGAE++++KPVKLSD
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
>TAIR|locus:2097870 [details] [associations]
symbol:RR5 "response regulator 5" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IMP] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0010114 "response to red light"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0009536
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0010114 GO:GO:0009736 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AL049658
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008488 EMBL:AB010916
EMBL:AF057281 EMBL:AY072390 EMBL:AY114698 IPI:IPI00516847
PIR:T06673 PIR:T50855 PIR:T50856 RefSeq:NP_190393.1
UniGene:At.24915 ProteinModelPortal:Q9SB04 SMR:Q9SB04 IntAct:Q9SB04
STRING:Q9SB04 EnsemblPlants:AT3G48100.1 GeneID:823965
KEGG:ath:AT3G48100 GeneFarm:4122 TAIR:At3g48100 InParanoid:Q9SB04
OMA:LEANDIY PhylomeDB:Q9SB04 ProtClustDB:CLSN2684027
Genevestigator:Q9SB04 GermOnline:AT3G48100 Uniprot:Q9SB04
Length = 184
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 95/123 (77%), Positives = 112/123 (91%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-SNVGFDALKVN 150
K LHVLAVDDS VDRK IERLL++SSCKVT V+S TRALQYLGLDGE S+VGF+ LK+N
Sbjct: 23 KLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKIN 82
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAE++++KPVK
Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142
Query: 211 LSD 213
L+D
Sbjct: 143 LAD 145
>TAIR|locus:2027237 [details] [associations]
symbol:ARR15 "response regulator 15" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IGI;RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC008263 EMBL:AC013258
EMBL:AF305720 IPI:IPI00538856 RefSeq:NP_177627.1 UniGene:At.11589
ProteinModelPortal:Q7G8V2 SMR:Q7G8V2 IntAct:Q7G8V2 STRING:Q7G8V2
EnsemblPlants:AT1G74890.1 GeneID:843828 KEGG:ath:AT1G74890
GeneFarm:4128 TAIR:At1g74890 HOGENOM:HOG000034820 InParanoid:Q7G8V2
KO:K14492 OMA:KISACKV PhylomeDB:Q7G8V2 ProtClustDB:CLSN2914197
Genevestigator:Q7G8V2 GermOnline:AT1G74890 Uniprot:Q7G8V2
Length = 206
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 90/123 (73%), Positives = 109/123 (88%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S ELHVLAVDDS+VDRK+IERLL+IS+CKVT VESGTRALQYLGLDG+ + G LKVN
Sbjct: 15 SPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVN 74
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPG+TGYELLKKIKESS RE+PVVIMSSE++ +I+ C+ EGAEE+++KPVK
Sbjct: 75 LIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVK 134
Query: 211 LSD 213
L+D
Sbjct: 135 LAD 137
>TAIR|locus:2194584 [details] [associations]
symbol:ARR4 "response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010017
"red or far-red light signaling pathway" evidence=IMP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
[GO:0010114 "response to red light" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA;IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IGI] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0007623 GO:GO:0004674
GO:GO:0046777 GO:GO:0006351 GO:GO:0042752 GO:GO:0010114
GO:GO:0009793 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC007067 GO:GO:0010017
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2912722
EMBL:AB008487 EMBL:AB010915 EMBL:AF057282 IPI:IPI00523637
PIR:T48851 RefSeq:NP_172517.1 UniGene:At.22981 UniGene:At.67259
ProteinModelPortal:O82798 SMR:O82798 IntAct:O82798 STRING:O82798
EnsemblPlants:AT1G10470.1 GeneID:837587 KEGG:ath:AT1G10470
GeneFarm:4121 TAIR:At1g10470 InParanoid:O82798 OMA:KRIRDYM
PhylomeDB:O82798 Genevestigator:O82798 GermOnline:AT1G10470
Uniprot:O82798
Length = 259
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 92/121 (76%), Positives = 111/121 (91%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD E+++ FD LKV+LI
Sbjct: 33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 92
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLKKIKESS FREVPVVIMSSE+VLT+ID CLEEGA+++++KPVKL+
Sbjct: 93 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152
Query: 213 D 213
D
Sbjct: 153 D 153
>TAIR|locus:2011286 [details] [associations]
symbol:ARR7 "response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=RCA] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0010200 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492
ProtClustDB:CLSN2914197 eggNOG:COG3706 EMBL:AB008490 EMBL:AC068602
IPI:IPI00536268 PIR:T50854 RefSeq:NP_173339.1 UniGene:At.238
ProteinModelPortal:Q9ZWS7 SMR:Q9ZWS7 IntAct:Q9ZWS7 STRING:Q9ZWS7
EnsemblPlants:AT1G19050.1 GeneID:838487 KEGG:ath:AT1G19050
GeneFarm:4124 TAIR:At1g19050 InParanoid:Q9ZWS7 OMA:LRISSCK
PhylomeDB:Q9ZWS7 Genevestigator:Q9ZWS7 GermOnline:AT1G19050
GO:GO:0019827 Uniprot:Q9ZWS7
Length = 206
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 91/121 (75%), Positives = 107/121 (88%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGLDG + LKVNLI
Sbjct: 23 ELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLI 82
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPG++GY+LLKKIKESS FREVPVVIMSSE++L +I CL+EGAEE+++KPVKL+
Sbjct: 83 VTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLA 142
Query: 213 D 213
D
Sbjct: 143 D 143
>TAIR|locus:2025911 [details] [associations]
symbol:ARR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IDA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=TAS] [GO:0010114
"response to red light" evidence=IMP] [GO:0010161 "red light
signaling pathway" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0007623 GO:GO:0006351 GO:GO:0042752 EMBL:AC007258
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008486 IPI:IPI00532280
PIR:T50853 RefSeq:NP_176202.1 UniGene:At.237
ProteinModelPortal:Q9ZWS9 SMR:Q9ZWS9 IntAct:Q9ZWS9 STRING:Q9ZWS9
EnsemblPlants:AT1G59940.1 GeneID:842288 KEGG:ath:AT1G59940
GeneFarm:4120 TAIR:At1g59940 eggNOG:COG3706 InParanoid:Q9ZWS9
OMA:RSEMIGI PhylomeDB:Q9ZWS9 ProtClustDB:CLSN2912722
Genevestigator:Q9ZWS9 GermOnline:AT1G59940 GO:GO:0010161
Uniprot:Q9ZWS9
Length = 231
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 90/123 (73%), Positives = 112/123 (91%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S ++HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD +++ V FD LKV+
Sbjct: 30 SDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVD 89
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LIITDY MPGMTGYELLKKIKES+ F+EVPVVIMSSE+V+T+ID CLEEGAE++++KPVK
Sbjct: 90 LIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVK 149
Query: 211 LSD 213
L+D
Sbjct: 150 LAD 152
>TAIR|locus:2102509 [details] [associations]
symbol:RR17 "response regulator 17" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=TAS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005739 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K14492
EMBL:AF305722 EMBL:AL163972 IPI:IPI00540746 PIR:T49039
RefSeq:NP_567037.1 UniGene:At.5240 ProteinModelPortal:Q9FPR6
SMR:Q9FPR6 STRING:Q9FPR6 EnsemblPlants:AT3G56380.1 GeneID:824805
KEGG:ath:AT3G56380 GeneFarm:4130 TAIR:At3g56380 InParanoid:Q9FPR6
OMA:MEEELHV PhylomeDB:Q9FPR6 ProtClustDB:CLSN2917444
Genevestigator:Q9FPR6 GermOnline:AT3G56380 Uniprot:Q9FPR6
Length = 153
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 81/139 (58%), Positives = 111/139 (79%)
Query: 76 NRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL 135
N+G + + ++ +ELHVLAVDD+ +DRKL+ER+L+ISSCKVT E+G RAL+YLGL
Sbjct: 2 NKGCGSGSDSCLSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL 61
Query: 136 -DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
D +Q++ + +KVNLIITDY MPGMTG+ELLKK+KESS +EVPVVI+SSE++ T+I+
Sbjct: 62 GDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 121
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CL GA+ ++ KP+KLSD
Sbjct: 122 KCLASGAQMFMQKPLKLSD 140
>TAIR|locus:2080590 [details] [associations]
symbol:ARR9 "response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;IMP;TAS] [GO:0007623 "circadian rhythm"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 GO:GO:0009536 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623 GO:GO:0006351
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
ProtClustDB:CLSN2683767 EMBL:AB010918 EMBL:AL138655 EMBL:AY090234
EMBL:AY133571 IPI:IPI00543561 PIR:T47764 RefSeq:NP_191263.1
UniGene:At.245 ProteinModelPortal:O80366 SMR:O80366 IntAct:O80366
STRING:O80366 EnsemblPlants:AT3G57040.1 GeneID:824871
KEGG:ath:AT3G57040 GeneFarm:4126 TAIR:At3g57040 InParanoid:O80366
OMA:GISTDRA PhylomeDB:O80366 Genevestigator:O80366
GermOnline:AT3G57040 Uniprot:O80366
Length = 234
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 85/140 (60%), Positives = 104/140 (74%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL----DGEQ 139
M AE + HVLAVDDS DRKLIERLLQ SSC+VT V+SG++AL++LGL D
Sbjct: 1 MGMAAE--SQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSND 58
Query: 140 SN------VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
N V ++VNLIITDY MPGMTGY+LLKK+KESS FR++PVVIMSSE+V +I
Sbjct: 59 PNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 118
Query: 194 DSCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+L+D
Sbjct: 119 SRCLEEGAEEFFLKPVRLAD 138
>TAIR|locus:2040282 [details] [associations]
symbol:RR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0007623 "circadian
rhythm" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=RCA] [GO:0048831 "regulation of shoot system
development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009536
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
EMBL:AB010917 EMBL:AC005662 EMBL:AY074643 IPI:IPI00535987
PIR:T48853 RefSeq:NP_181663.1 UniGene:At.244
ProteinModelPortal:O80365 SMR:O80365 IntAct:O80365 STRING:O80365
EnsemblPlants:AT2G41310.1 GeneID:818730 KEGG:ath:AT2G41310
GeneFarm:4125 TAIR:At2g41310 InParanoid:O80365 OMA:METESKF
PhylomeDB:O80365 ProtClustDB:CLSN2683767 Genevestigator:O80365
GermOnline:AT2G41310 Uniprot:O80365
Length = 225
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 80/135 (59%), Positives = 103/135 (76%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL---DGEQSNVG 143
V E + HVLAVDDS DRK+IERLLQ SSC+VT V+SG++AL++LGL D + + +
Sbjct: 2 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61
Query: 144 -----FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+++NLIITDY MPGMTGY+LLKK+KES+ FR +PVVIMSSE+V +I CLE
Sbjct: 62 TSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLE 121
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+ +KPVKL+D
Sbjct: 122 EGAEEFFLKPVKLAD 136
>UNIPROTKB|Q4GZK2 [details] [associations]
symbol:rr9 "Type A response regulator 9" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009735
GO:GO:0006355 GO:GO:0035556 GO:GO:0007623 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
EMBL:CM000136 EMBL:AJ938078 STRING:Q4GZK2 Uniprot:Q4GZK2
Length = 201
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 81/135 (60%), Positives = 104/135 (77%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
MA E HVLAVDDS DRKLIERLL+ SS +VT V+SG++AL++LGL D E S +
Sbjct: 1 MAVAIEAP--FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPI 58
Query: 143 GFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+ + VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSS+++ ++I+ CLE
Sbjct: 59 STQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLE 118
Query: 199 EGAEEYIVKPVKLSD 213
EGA+E+ +KPV+LSD
Sbjct: 119 EGADEFFLKPVRLSD 133
>UNIPROTKB|Q4GZK7 [details] [associations]
symbol:rr4 "Type A response regulator 4" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000126
EMBL:AJ938073 Uniprot:Q4GZK7
Length = 232
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 76/137 (55%), Positives = 101/137 (73%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL--DGEQSNVG 143
TV + HVLAVDDS +DRKLIE LL+ SS +VT V+SG++AL+ LGL +G+ S+
Sbjct: 2 TVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSS 61
Query: 144 -------FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
+ VNLIITDY MPGMTGY+LLK++K SS +++PVVIMSSE+V +I+ C
Sbjct: 62 PSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRC 121
Query: 197 LEEGAEEYIVKPVKLSD 213
LE+GAEE+ +KPVKL+D
Sbjct: 122 LEDGAEEFFLKPVKLAD 138
>UNIPROTKB|Q4GZK5 [details] [associations]
symbol:rr6 "Type A response regulator 6" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AJ938075 ProteinModelPortal:Q4GZK5 KEGG:dosa:Os04t0673300-01
Gramene:Q4GZK5 Uniprot:Q4GZK5
Length = 170
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 76/131 (58%), Positives = 95/131 (72%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A A E E+HVLAVDDS VDR +I ++L+ S +VT VES TRAL+ L L G NV
Sbjct: 39 AAAAGDEAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL-GLVPNV 97
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
N+IITDY MPGMTGYELLK++KESS +E+PVVIMSSE+V +I CLEEGAE
Sbjct: 98 -------NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAE 150
Query: 203 EYIVKPVKLSD 213
++++KPV+ SD
Sbjct: 151 DFLLKPVRPSD 161
>UNIPROTKB|Q4GZK8 [details] [associations]
symbol:rr3 "Type A response regulator 3" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000127 EMBL:AJ938072
STRING:Q4GZK8 Uniprot:Q4GZK8
Length = 131
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 69/130 (53%), Positives = 92/130 (70%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M+T E HVLAVDDS VDR +I RLL+ S +VT V+SG RAL+ L LD
Sbjct: 1 MSTKTVPEPEPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSLDRN----- 55
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
V++IITDY MP MTG++LLK++KES+ +E+PVV+MSSE+ T+I CLEEGAE+
Sbjct: 56 -----VHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAED 110
Query: 204 YIVKPVKLSD 213
+++KPV+ SD
Sbjct: 111 FLIKPVRPSD 120
>UNIPROTKB|Q4GZK4 [details] [associations]
symbol:rr7 "Type A response regulator 7" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938076
ProteinModelPortal:Q4GZK4 KEGG:dosa:Os07t0449700-01 Gramene:Q4GZK4
Uniprot:Q4GZK4
Length = 206
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 64/119 (53%), Positives = 86/119 (72%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+V+AVDDS VDR +I LL+ S + +SG RAL+ LG + NV ++IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG---SEPNV-------SMIIT 137
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LLKKIKESS +++PVVIMSSE+V T+I CLEEGAE++++KPV+ +D
Sbjct: 138 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPAD 196
>UNIPROTKB|Q4GZL0 [details] [associations]
symbol:rr1 "Type A response regulator 1" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CM000129 EMBL:AJ938070 eggNOG:NOG76823
Uniprot:Q4GZL0
Length = 231
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 55/122 (45%), Positives = 79/122 (64%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
VL VDDS VDR++++ LL S+C V AV+S +A+++LGL E D +
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQAID-----M 64
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++TDY MP MTGYELLK IK S + +PV++MSSE+ +I C+ GAE++IVKP++
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 212 SD 213
D
Sbjct: 125 KD 126
>UNIPROTKB|Q4GZK3 [details] [associations]
symbol:rr8 "Type A response regulator 8" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:AJ938077 ProteinModelPortal:Q4GZK3
STRING:Q4GZK3 KEGG:dosa:Os08t0376700-01 KEGG:dosa:Os08t0377200-01
Gramene:Q4GZK3 Uniprot:Q4GZK3
Length = 121
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 53/119 (44%), Positives = 78/119 (65%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD++VDR ++ L + +VTAVES +AL +L D E V++I++
Sbjct: 5 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL--DSEHD--------VDMIVS 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY LL ++K+S +PVVI SS+++ +I CL+ GA++YI+KPVK+ D
Sbjct: 55 DYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVD 113
>UNIPROTKB|Q4GZK9 [details] [associations]
symbol:rr2 "Type A response regulator 2" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938071
ProteinModelPortal:Q4GZK9 KEGG:dosa:Os02t0557800-01 Gramene:Q4GZK9
Uniprot:Q4GZK9
Length = 252
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 42/104 (40%), Positives = 67/104 (64%)
Query: 120 VTAVESGTRALQYLGLD-GEQSNV---------GFDALKVNLIITDYTMPGMTGYELLKK 169
VTAV+SG +A++ LG G++ ++ + +++++TDY MP MTGY+LLK
Sbjct: 45 VTAVDSGKKAMELLGRRRGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKA 104
Query: 170 IKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
IK +PVV+MSSE+ +I CL GAE++I+KP+K++D
Sbjct: 105 IKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKMND 148
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 171 (65.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 38/120 (31%), Positives = 69/120 (57%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ Y R++I LL+ KV AV G A + L E+S+ ++LI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLK---EKSH------NIDLIL 87
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++G+ LL + E + +PV++MSS+D + + C+ GA +Y++KP++ ++
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNE 147
>TIGR_CMR|GSU_1285 [details] [associations]
symbol:GSU_1285 "sensory box sensor histidine
kinase/response regulator" species:243231 "Geobacter sulfurreducens
PCA" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_952338.1
PDB:2R78 PDBsum:2R78 ProteinModelPortal:Q74DN1 SMR:Q74DN1
GeneID:2688111 KEGG:gsu:GSU1285 PATRIC:22025341
HOGENOM:HOG000144300 OMA:AHTNSER
BioCyc:GSUL243231:GH27-1253-MONOMER EvolutionaryTrace:Q74DN1
Uniprot:Q74DN1
Length = 772
Score = 174 (66.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 43/134 (32%), Positives = 72/134 (53%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN 141
WA+A + + L VL VDDS V RK++ LL+ +VT G AL +G +
Sbjct: 534 WAVAEKSVAVRPLSVLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIGREA---- 589
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEE 199
FD L++ D MP M G+E ++ I+ E++ +P++ +++ + + CLE
Sbjct: 590 --FD-----LVLMDVQMPVMDGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEA 642
Query: 200 GAEEYIVKPVKLSD 213
GA++Y+ KPV S+
Sbjct: 643 GADDYLAKPVNFSE 656
>UNIPROTKB|P71403 [details] [associations]
symbol:cheY "Chemotaxis protein CheY homolog" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AE000511
GenomeReviews:AE000511_GR GO:GO:0001539 KO:K03413 EMBL:X81897
EMBL:U97567 EMBL:AF021090 PIR:C64653 RefSeq:NP_207858.1
RefSeq:YP_006934983.1 PDB:3GWG PDB:3H1E PDB:3H1F PDB:3H1G
PDBsum:3GWG PDBsum:3H1E PDBsum:3H1F PDBsum:3H1G
ProteinModelPortal:P71403 DIP:DIP-3256N MINT:MINT-160671
GeneID:13870261 GeneID:899603 KEGG:heo:C694_05515 KEGG:hpy:HP1067
PATRIC:20593473 OMA:DVLITDW ProtClustDB:CLSK872349
EvolutionaryTrace:P71403 Uniprot:P71403
Length = 124
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 37/116 (31%), Positives = 65/116 (56%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + KV +
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADT--------KV--L 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>DICTYBASE|DDB_G0284331 [details] [associations]
symbol:regA "response regulator receiver
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0051281
"positive regulation of release of sequestered calcium ion into
cytosol" evidence=IMP] [GO:0051279 "regulation of release of
sequestered calcium ion into cytosol" evidence=IMP] [GO:0046058
"cAMP metabolic process" evidence=IMP] [GO:0031276 "negative
regulation of lateral pseudopodium assembly" evidence=IMP]
[GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity"
evidence=IDA;IMP] [GO:0005622 "intracellular" evidence=TAS]
[GO:0006970 "response to osmotic stress" evidence=TAS] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0047555 "3',5'-cyclic-GMP phosphodiesterase
activity" evidence=IDA] [GO:0006198 "cAMP catabolic process"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0004114 "3',5'-cyclic-nucleotide
phosphodiesterase activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001789 InterPro:IPR002073 InterPro:IPR003607
InterPro:IPR023088 InterPro:IPR023174 Pfam:PF00072 Pfam:PF00233
PRINTS:PR00387 PROSITE:PS00126 PROSITE:PS50110 SMART:SM00448
SMART:SM00471 dictyBase:DDB_G0284331 GO:GO:0005829
GenomeReviews:CM000153_GR GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0030435 GO:GO:0030587 GO:GO:0005622 GO:GO:0006970
GO:GO:0051281 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:AAFI02000064 GO:GO:0030552 GO:GO:0031276
GO:GO:0004115 GO:GO:0006198 Gene3D:1.10.1300.10 EMBL:U60170
EMBL:AJ005398 RefSeq:XP_638612.1 ProteinModelPortal:Q23917
STRING:Q23917 EnsemblProtists:DDB0191479 GeneID:8624583
KEGG:ddi:DDB_G0284331 OMA:SHYETIC ProtClustDB:CLSZ2728943
Uniprot:Q23917
Length = 793
Score = 163 (62.4 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 37/118 (31%), Positives = 67/118 (56%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++ +L DD V RK++ LL+ VT V +G A +Y+ G+Q K +L+
Sbjct: 159 KVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYIN-KGQQ--------KYDLV 209
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV-LTQIDSCLEEGAEEYIVKPV 209
+TD MP +TG++LL++I + V R +PV++MS V + ++ G ++++ KP+
Sbjct: 210 LTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 267
>UNIPROTKB|Q4KG39 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:220664
"Pseudomonas protegens Pf-5" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0005622 GO:GO:0006935
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 OMA:FGFVISD RefSeq:YP_258794.1
ProteinModelPortal:Q4KG39 SMR:Q4KG39 STRING:Q4KG39 GeneID:3477601
KEGG:pfl:PFL_1668 PATRIC:19872565 ProtClustDB:CLSK715044
BioCyc:PFLU220664:GIX8-1676-MONOMER Uniprot:Q4KG39
Length = 123
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 34/116 (29%), Positives = 61/116 (52%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ + + GT A+ L N G ++ +
Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVL-------NSG----SIDFL 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 50 VTDWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 105
>TIGR_CMR|CPS_1520 [details] [associations]
symbol:CPS_1520 "chemotaxis protein CheY" species:167879
"Colwellia psychrerythraea 34H" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 OMA:LEANDIY
KO:K03413 RefSeq:YP_268262.1 ProteinModelPortal:Q485K3 SMR:Q485K3
STRING:Q485K3 GeneID:3522501 KEGG:cps:CPS_1520 PATRIC:21466247
BioCyc:CPSY167879:GI48-1601-MONOMER Uniprot:Q485K3
Length = 127
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
K + VL VDD R++++ LL+ + + + G AL L G+ FD
Sbjct: 3 KNMKVLVVDDFSTMRRIVKNLLRDLGFTNIQEADDGNTALPMLQ-GGD-----FD----- 51
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LLK I+ + +PV+++++E QI + G YIVKP
Sbjct: 52 FVVTDWNMPGMQGIDLLKAIRADANLSHIPVLLITAEAKKEQIIMAAQAGVNGYIVKP 109
>TIGR_CMR|CJE_1261 [details] [associations]
symbol:CJE_1261 "chemotaxis protein CheY" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413
OMA:DVLITDW ProtClustDB:CLSK872349 RefSeq:YP_179249.1
ProteinModelPortal:Q5HTY6 STRING:Q5HTY6 GeneID:3231768
KEGG:cjr:CJE1261 PATRIC:20044318
BioCyc:CJEJ195099:GJC0-1287-MONOMER Uniprot:Q5HTY6
Length = 130
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 34/116 (29%), Positives = 62/116 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A L + + V ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>UNIPROTKB|P0AE67 [details] [associations]
symbol:cheY species:83333 "Escherichia coli K-12"
[GO:0006473 "protein acetylation" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0060286 "flagellar cell motility" evidence=TAS]
[GO:0006935 "chemotaxis" evidence=IEA;IMP;TAS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IMP] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IDA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0000287 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006935 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000160
PDB:1BDJ PDBsum:1BDJ HOGENOM:HOG000034820 GO:GO:0006473
GO:GO:0060286 PDB:1A0O PDB:1EAY PDB:1FFG PDB:1FFS PDB:1FFW PDB:2LP4
PDBsum:1A0O PDBsum:1EAY PDBsum:1FFG PDBsum:1FFS PDBsum:1FFW
PDBsum:2LP4 EMBL:M13463 EMBL:K02175 PIR:E25195 RefSeq:NP_416396.1
RefSeq:YP_490144.1 PDB:1AB5 PDB:1AB6 PDB:1C4W PDB:1CEY PDB:1CHN
PDB:1CYE PDB:1D4Z PDB:1DJM PDB:1E6K PDB:1E6L PDB:1E6M PDB:1EHC
PDB:1F4V PDB:1FQW PDB:1HEY PDB:1JBE PDB:1KMI PDB:1MIH PDB:1U8T
PDB:1UDR PDB:1VLZ PDB:1YMU PDB:1YMV PDB:1ZDM PDB:2B1J PDB:2ID7
PDB:2ID9 PDB:2IDM PDB:3CHY PDB:3F7N PDB:3FFT PDB:3FFW PDB:3FFX
PDB:3FGZ PDB:3MYY PDB:3OLV PDB:3OLW PDB:3OLX PDB:3OLY PDB:3OO0
PDB:3OO1 PDB:3RVJ PDB:3RVK PDB:3RVL PDB:3RVM PDB:3RVN PDB:3RVO
PDB:3RVP PDB:3RVQ PDB:3RVR PDB:3RVS PDB:5CHY PDB:6CHY PDBsum:1AB5
PDBsum:1AB6 PDBsum:1C4W PDBsum:1CEY PDBsum:1CHN PDBsum:1CYE
PDBsum:1D4Z PDBsum:1DJM PDBsum:1E6K PDBsum:1E6L PDBsum:1E6M
PDBsum:1EHC PDBsum:1F4V PDBsum:1FQW PDBsum:1HEY PDBsum:1JBE
PDBsum:1KMI PDBsum:1MIH PDBsum:1U8T PDBsum:1UDR PDBsum:1VLZ
PDBsum:1YMU PDBsum:1YMV PDBsum:1ZDM PDBsum:2B1J PDBsum:2ID7
PDBsum:2ID9 PDBsum:2IDM PDBsum:3CHY PDBsum:3F7N PDBsum:3FFT
PDBsum:3FFW PDBsum:3FFX PDBsum:3FGZ PDBsum:3MYY PDBsum:3OLV
PDBsum:3OLW PDBsum:3OLX PDBsum:3OLY PDBsum:3OO0 PDBsum:3OO1
PDBsum:3RVJ PDBsum:3RVK PDBsum:3RVL PDBsum:3RVM PDBsum:3RVN
PDBsum:3RVO PDBsum:3RVP PDBsum:3RVQ PDBsum:3RVR PDBsum:3RVS
PDBsum:5CHY PDBsum:6CHY ProteinModelPortal:P0AE67 SMR:P0AE67
DIP:DIP-48237N IntAct:P0AE67 SWISS-2DPAGE:P0AE67 PRIDE:P0AE67
EnsemblBacteria:EBESCT00000000750 EnsemblBacteria:EBESCT00000017790
GeneID:12930559 GeneID:946393 KEGG:ecj:Y75_p1858 KEGG:eco:b1882
PATRIC:32119091 EchoBASE:EB0148 EcoGene:EG10150 KO:K03413
OMA:FGFVISD ProtClustDB:PRK10610 BioCyc:EcoCyc:CHEY-MONOMER
BioCyc:ECOL316407:JW1871-MONOMER EvolutionaryTrace:P0AE67
Genevestigator:P0AE67 Uniprot:P0AE67
Length = 129
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 92 KELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
KEL L VDD R+++ LL ++ V E G AL L G GF
Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG----YGF------ 53
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 54 -VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>UNIPROTKB|Q48GG3 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_275520.1
ProteinModelPortal:Q48GG3 SMR:Q48GG3 STRING:Q48GG3 GeneID:3558182
KEGG:psp:PSPPH_3362 PATRIC:19976130 OMA:GHYDFLV
ProtClustDB:CLSK642753 Uniprot:Q48GG3
Length = 124
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 37/116 (31%), Positives = 62/116 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ + + + G AL L QS FD L
Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTSEADDGLTALPML-----QSGA-FDFL----- 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGMTG +LL++++ + +PV+++++E QI + G Y+VKP
Sbjct: 50 VTDWNMPGMTGIDLLRQVRADERLKSLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 105
>TIGR_CMR|SO_3209 [details] [associations]
symbol:SO_3209 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:GHYDFLV
HSSP:P06143 RefSeq:NP_718764.1 ProteinModelPortal:Q8ECD4 SMR:Q8ECD4
GeneID:1170902 KEGG:son:SO_3209 PATRIC:23526102
ProtClustDB:CLSK907053 Uniprot:Q8ECD4
Length = 127
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 37/118 (31%), Positives = 62/118 (52%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
K + +L VDD R++I+ LL+ + + G+ AL L G+ FD
Sbjct: 3 KNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQ-KGD-----FD----- 51
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LLK I+ + +PV+++++E QI + + G Y+VKP
Sbjct: 52 FVVTDWNMPGMQGIDLLKAIRADDSLKHLPVLMVTAEAKREQIIAAAQAGVNGYVVKP 109
>TIGR_CMR|CPS_3950 [details] [associations]
symbol:CPS_3950 "response regulator/GGDEF domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 Pfam:PF00563 GO:GO:0006355 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 Gene3D:3.20.20.450
InterPro:IPR001633 SMART:SM00052 SUPFAM:SSF141868 PROSITE:PS50883
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000136246 RefSeq:YP_270608.1 ProteinModelPortal:Q47X62
STRING:Q47X62 GeneID:3523052 KEGG:cps:CPS_3950 PATRIC:21470787
OMA:NITEVES ProtClustDB:CLSK768238
BioCyc:CPSY167879:GI48-3963-MONOMER Uniprot:Q47X62
Length = 566
Score = 154 (59.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 47/120 (39%), Positives = 69/120 (57%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQIS--SCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+ + VL VDD VDR+LI+R L+ S SC +T VES AL+ L + S+ FDA
Sbjct: 2 QHMKVLIVDDDIVDRELIKRTLKRSDISCNITEVESVDDALKNL----QDSS--FDA--- 52
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS--EDVLTQIDSCLEEGAEEYIVK 207
I+ DY +P G ELL +IK + V++MS+ ED L +C+ GA++++VK
Sbjct: 53 --ILLDYNLPQRNGIELLLEIKGDPNRHDTAVIMMSTSKEDELAL--NCINAGAQDFLVK 108
>UNIPROTKB|Q9KQD5 [details] [associations]
symbol:VC_2065 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:GHYDFLV HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1
ProteinModelPortal:Q9KQD5 SMR:Q9KQD5 DNASU:2613445 GeneID:2613445
KEGG:vch:VC2065 PATRIC:20083164 ProtClustDB:CLSK874661
Uniprot:Q9KQD5
Length = 130
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+K + +L VDD R++++ LL+ + + G AL L G+ FD
Sbjct: 6 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLK-KGD-----FD---- 55
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LLK I+ + +PV+++++E QI + G YIVKP
Sbjct: 56 -FVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKP 113
>TIGR_CMR|GSU_2535 [details] [associations]
symbol:GSU_2535 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953581.1 ProteinModelPortal:Q74A55 GeneID:2687797
KEGG:gsu:GSU2535 PATRIC:22027919 OMA:DLGCNVY
BioCyc:GSUL243231:GH27-2511-MONOMER Uniprot:Q74A55
Length = 147
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 35/116 (30%), Positives = 64/116 (55%)
Query: 96 VLAVDDSYVDRKLIER-LLQISSCK-VTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L VDD +LIE+ L ++ + V +++G RAL ++ +GE G L+ L+I
Sbjct: 9 ILLVDDDRGHARLIEKHLARMGGMQHVIWLDNGRRALDFIFEEGEFE--GVKTLRPCLVI 66
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP + G +L ++K + VVI+++ D +I++C E G + ++ KP+
Sbjct: 67 ADLNMPELGGVHVLSRLKGDERTSSIAVVILTTSDNPAEIEACHELGCDAFLRKPM 122
>TIGR_CMR|VC_2065 [details] [associations]
symbol:VC_2065 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:GHYDFLV
HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1 ProteinModelPortal:Q9KQD5
SMR:Q9KQD5 DNASU:2613445 GeneID:2613445 KEGG:vch:VC2065
PATRIC:20083164 ProtClustDB:CLSK874661 Uniprot:Q9KQD5
Length = 130
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+K + +L VDD R++++ LL+ + + G AL L G+ FD
Sbjct: 6 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLK-KGD-----FD---- 55
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LLK I+ + +PV+++++E QI + G YIVKP
Sbjct: 56 -FVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKP 113
>TAIR|locus:2054895 [details] [associations]
symbol:AT2G07440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006217
IPI:IPI00531473 PIR:H84485 RefSeq:NP_178754.1 UniGene:At.63414
ProteinModelPortal:Q9ZQJ8 SMR:Q9ZQJ8 EnsemblPlants:AT2G07440.1
GeneID:815313 KEGG:ath:AT2G07440 TAIR:At2g07440 InParanoid:Q9ZQJ8
PhylomeDB:Q9ZQJ8 ArrayExpress:Q9ZQJ8 Genevestigator:Q9ZQJ8
Uniprot:Q9ZQJ8
Length = 136
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 166 LLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+ + +K ES+ FR + VVIMSSE+V T+I CLE+GAEE+ +KPVKL D
Sbjct: 2 MARDVKWESAAFRSIHVVIMSSENVPTRISRCLEKGAEEFFLKPVKLVD 50
>TIGR_CMR|GSU_2219 [details] [associations]
symbol:GSU_2219 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P08402
RefSeq:NP_953268.1 ProteinModelPortal:Q74AY0 GeneID:2685652
KEGG:gsu:GSU2219 PATRIC:22027293 OMA:VMLTAKK ProtClustDB:CLSK828762
BioCyc:GSUL243231:GH27-2166-MONOMER Uniprot:Q74AY0
Length = 123
Score = 131 (51.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L V+D KL LL V V G AL Y+ A +LII D
Sbjct: 6 ILIVEDEESLLKLESILLSSRGYAVAGVTDGKSALDYIA-----------ATPPDLIILD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+PGM G+E+ + IK R +PVV+++++ D LE GA Y+ KP K
Sbjct: 55 IMLPGMDGFEVCQMIKADPSTRHIPVVMLTAKKSTQDRDKGLEAGASAYVTKPFK 109
>UNIPROTKB|Q3ADA5 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_359879.1
ProteinModelPortal:Q3ADA5 STRING:Q3ADA5 GeneID:3726250
KEGG:chy:CHY_1032 PATRIC:21275199 OMA:AGANFYL
BioCyc:CHYD246194:GJCN-1031-MONOMER Uniprot:Q3ADA5
Length = 118
Score = 130 (50.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL VDDS+ R+ + + Q S +V +G AL+ + L+GE FD + V
Sbjct: 1 MKVLIVDDSFTVRQYFKEIFQGFSWEVEEAVNGLEALEKV-LNGE-----FDLMTV---- 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP M GY + K++E V +PV+++S+E L+ GA Y+VKPV
Sbjct: 51 -DVNMPKMDGYTFVYKVREMGV--SLPVILISTESKEHDKLKGLQAGATLYLVKPV 103
>TIGR_CMR|CHY_1032 [details] [associations]
symbol:CHY_1032 "chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0005622
GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_359879.1
ProteinModelPortal:Q3ADA5 STRING:Q3ADA5 GeneID:3726250
KEGG:chy:CHY_1032 PATRIC:21275199 OMA:AGANFYL
BioCyc:CHYD246194:GJCN-1031-MONOMER Uniprot:Q3ADA5
Length = 118
Score = 130 (50.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL VDDS+ R+ + + Q S +V +G AL+ + L+GE FD + V
Sbjct: 1 MKVLIVDDSFTVRQYFKEIFQGFSWEVEEAVNGLEALEKV-LNGE-----FDLMTV---- 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP M GY + K++E V +PV+++S+E L+ GA Y+VKPV
Sbjct: 51 -DVNMPKMDGYTFVYKVREMGV--SLPVILISTESKEHDKLKGLQAGATLYLVKPV 103
>UNIPROTKB|Q55169 [details] [associations]
symbol:rcp1 "Response regulator rcp1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:BA000022 GenomeReviews:BA000022_GR
HOGENOM:HOG000034820 PIR:S74390 RefSeq:NP_442238.1
RefSeq:YP_005652298.1 PDB:1I3C PDB:1JLK PDBsum:1I3C PDBsum:1JLK
ProteinModelPortal:Q55169 SMR:Q55169 IntAct:Q55169 STRING:Q55169
GeneID:12253517 GeneID:952559 KEGG:syn:slr0474 KEGG:syy:SYNGTS_2345
PATRIC:23842114 KO:K11355 OMA:YELHVNC ProtClustDB:CLSK893477
EvolutionaryTrace:Q55169 Uniprot:Q55169
Length = 147
Score = 127 (49.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 32/120 (26%), Positives = 62/120 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L V+DS D +L++ +L+ S+ ++ + G A+ +L GE N + + NLI+
Sbjct: 11 ILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYEN----SPRPNLIL 66
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +P G E+L +IK++ + +PVV++++ + + E Y+ K L D
Sbjct: 67 LDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKD 126
>UNIPROTKB|Q74AX6 [details] [associations]
symbol:cheY40H-1 "Response receiver CheY associated with
MCPs of class 40H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6 GeneID:2685646
KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV ProtClustDB:CLSK828765
BioCyc:GSUL243231:GH27-2170-MONOMER Uniprot:Q74AX6
Length = 121
Score = 127 (49.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 109 IERLLQISSCKVTAVESGTRALQYL-GLDGEQSNVGFDALKV------NLIITDYTMPGM 161
++R+L I+ T +Q L G + +++ GF+AL++ +LIITD MP +
Sbjct: 1 MKRIL-IAEDSATMRSMLVATIQSLDGFEVVEASSGFEALRLLPRERLDLIITDINMPDI 59
Query: 162 TGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
G EL+ ++ S +R +P+ I+S+E + L GA EY+VKP
Sbjct: 60 NGLELVSFVRTSDNYRHIPLFIISTEGSERDREKGLSLGANEYLVKP 106
>TIGR_CMR|GSU_2223 [details] [associations]
symbol:GSU_2223 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P06143 RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6
GeneID:2685646 KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV
ProtClustDB:CLSK828765 BioCyc:GSUL243231:GH27-2170-MONOMER
Uniprot:Q74AX6
Length = 121
Score = 127 (49.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 109 IERLLQISSCKVTAVESGTRALQYL-GLDGEQSNVGFDALKV------NLIITDYTMPGM 161
++R+L I+ T +Q L G + +++ GF+AL++ +LIITD MP +
Sbjct: 1 MKRIL-IAEDSATMRSMLVATIQSLDGFEVVEASSGFEALRLLPRERLDLIITDINMPDI 59
Query: 162 TGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
G EL+ ++ S +R +P+ I+S+E + L GA EY+VKP
Sbjct: 60 NGLELVSFVRTSDNYRHIPLFIISTEGSERDREKGLSLGANEYLVKP 106
>UNIPROTKB|Q747K4 [details] [associations]
symbol:GSU3261 "Response regulator, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0035556 "intracellular signal transduction" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 HSSP:P10957 RefSeq:NP_954302.1
ProteinModelPortal:Q747K4 GeneID:2686384 KEGG:gsu:GSU3261
PATRIC:22029363 OMA:KLPRIDG ProtClustDB:CLSK743192
BioCyc:GSUL243231:GH27-3237-MONOMER Uniprot:Q747K4
Length = 150
Score = 125 (49.1 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 96 VLAVDDSYVDRKLIERLL--QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L V+D+ D L R L + VT V G AL +L G S+ + L++
Sbjct: 6 ILLVEDNPDDEVLTLRALGKHAITPDVTVVRDGVEALDFLFGTGSYSDRDLSIMP-KLVL 64
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D +P + G E+L++++ R +PVV+ +S + I C GA YI KPV
Sbjct: 65 LDLKLPKVDGLEVLRRLRADQRTRLLPVVVFTSSNEEQDILECHNLGANSYIRKPV 120
>TIGR_CMR|GSU_3261 [details] [associations]
symbol:GSU_3261 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P10957
RefSeq:NP_954302.1 ProteinModelPortal:Q747K4 GeneID:2686384
KEGG:gsu:GSU3261 PATRIC:22029363 OMA:KLPRIDG ProtClustDB:CLSK743192
BioCyc:GSUL243231:GH27-3237-MONOMER Uniprot:Q747K4
Length = 150
Score = 125 (49.1 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 96 VLAVDDSYVDRKLIERLL--QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L V+D+ D L R L + VT V G AL +L G S+ + L++
Sbjct: 6 ILLVEDNPDDEVLTLRALGKHAITPDVTVVRDGVEALDFLFGTGSYSDRDLSIMP-KLVL 64
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D +P + G E+L++++ R +PVV+ +S + I C GA YI KPV
Sbjct: 65 LDLKLPKVDGLEVLRRLRADQRTRLLPVVVFTSSNEEQDILECHNLGANSYIRKPV 120
>TIGR_CMR|GSU_1117 [details] [associations]
symbol:GSU_1117 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P06143
RefSeq:NP_952170.1 ProteinModelPortal:Q74E47 GeneID:2686890
KEGG:gsu:GSU1117 PATRIC:22024996 OMA:ASNVIMI ProtClustDB:CLSK828188
BioCyc:GSUL243231:GH27-1119-MONOMER Uniprot:Q74E47
Length = 127
Score = 124 (48.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R + +LL+ +V +V +G AL YL +Q +VN+I+TD
Sbjct: 9 ILVVDDEENARIGLTKLLEREGFEVASVSNGFEALNYL----QQR-------EVNVIVTD 57
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP M G L+++ +S F V+++++ + + GA EYI KPVKL +
Sbjct: 58 INMPEMNGITFLRELNKS--FPRSNVIMITAYGGVESYIEAMNLGAFEYINKPVKLDE 113
>TIGR_CMR|GSU_2287 [details] [associations]
symbol:GSU_2287 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953336.1 ProteinModelPortal:Q74AR5 GeneID:2686930
KEGG:gsu:GSU2287 PATRIC:22027433 OMA:HERDMEA
BioCyc:GSUL243231:GH27-2270-MONOMER Uniprot:Q74AR5
Length = 136
Score = 124 (48.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 28/123 (22%), Positives = 71/123 (57%)
Query: 91 SKELHVLAVDDS----YVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
++E+ +L V+D+ ++ R+++++ +S ++ V+ G AL+YL V +
Sbjct: 4 TEEITMLLVEDNPDEEFLTRRVLKKFPALS--RIDVVKDGVEALRYL-------TVAENR 54
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
+ ++ D +P + G ++L+++++ R++PVV+++S D +++C + GA ++
Sbjct: 55 VPPRFVLLDLKLPRVDGVDVLREMRKREETRDIPVVVLTSSDHERDMEACGKLGAAHFLQ 114
Query: 207 KPV 209
KP+
Sbjct: 115 KPL 117
>TIGR_CMR|CJE_1664 [details] [associations]
symbol:CJE_1664 "DNA-binding response regulator"
species:195099 "Campylobacter jejuni RM1221" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 RefSeq:YP_179645.1 ProteinModelPortal:Q5HSU0
STRING:Q5HSU0 GeneID:3232292 KEGG:cjr:CJE1664 PATRIC:20045123
OMA:KRNICEL ProtClustDB:CLSK879286
BioCyc:CJEJ195099:GJC0-1694-MONOMER Uniprot:Q5HSU0
Length = 226
Score = 136 (52.9 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 37/125 (29%), Positives = 66/125 (52%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
EC KEL +L V+D R+ + +L KV ++G L+ F K
Sbjct: 4 EC-KELIILVVEDEVKARESMINILSERFSKVIGAQNGDEGLKK-----------FKKFK 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+L+ITD MP M G ++ ++IKE S +VP+V++S+ ++ ++ G ++Y++KP
Sbjct: 52 PDLVITDIAMPIMDGLDMAREIKEIS--DDVPIVVLSAYSEKERLLRSIDIGIDKYLIKP 109
Query: 209 VKLSD 213
V + +
Sbjct: 110 VDIEE 114
>UNIPROTKB|Q9KKK8 [details] [associations]
symbol:VC_A1096 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV
KO:K03413 HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1
ProteinModelPortal:Q9KKK8 DNASU:2612407 GeneID:2612407
KEGG:vch:VCA1096 PATRIC:20086710 ProtClustDB:CLSK789264
Uniprot:Q9KKK8
Length = 125
Score = 122 (48.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VLAVDDS R+++ LQ + +V G AL + FD +II+D
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREAL------AKAQKARFD-----VIISD 58
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP MTG+E +K ++ S ++ P++++++E + GA ++VKP
Sbjct: 59 VNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKP 111
>TIGR_CMR|VC_A1096 [details] [associations]
symbol:VC_A1096 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV KO:K03413
HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1 ProteinModelPortal:Q9KKK8
DNASU:2612407 GeneID:2612407 KEGG:vch:VCA1096 PATRIC:20086710
ProtClustDB:CLSK789264 Uniprot:Q9KKK8
Length = 125
Score = 122 (48.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VLAVDDS R+++ LQ + +V G AL + FD +II+D
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREAL------AKAQKARFD-----VIISD 58
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP MTG+E +K ++ S ++ P++++++E + GA ++VKP
Sbjct: 59 VNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKP 111
>TIGR_CMR|GSU_1671 [details] [associations]
symbol:GSU_1671 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P06143 HOGENOM:HOG000167205 RefSeq:NP_952722.1
ProteinModelPortal:Q74CK2 GeneID:2687445 KEGG:gsu:GSU1671
PATRIC:22026193 OMA:IADWLMP ProtClustDB:CLSK740862
BioCyc:GSUL243231:GH27-1671-MONOMER Uniprot:Q74CK2
Length = 322
Score = 139 (54.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/113 (30%), Positives = 61/113 (53%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ + R ++E L+ + V E+G AL+ N G+ +++TD
Sbjct: 18 ILIVDDNRLLRTMLETSLKSAGYDVVMAENGKEALEIF-------NKGY----YPIVMTD 66
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ MP M G EL + I+ R +++++S+D + + LE GA+EY+VKP
Sbjct: 67 WVMPEMDGLELCRAIRADCSGRYTYIILLTSQDSKNDVIAGLEAGADEYLVKP 119
>TIGR_CMR|GSU_0598 [details] [associations]
symbol:GSU_0598 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_951656.1 ProteinModelPortal:Q74FK9 GeneID:2688651
KEGG:gsu:GSU0598 PATRIC:22023947 OMA:SGMEVLK ProtClustDB:CLSK827940
BioCyc:GSUL243231:GH27-583-MONOMER Uniprot:Q74FK9
Length = 470
Score = 141 (54.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/117 (35%), Positives = 60/117 (51%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + VL VDD + R+ + R+L+ V SG AL+ L + N G L
Sbjct: 2 ENIDVLVVDDEAIIREGLRRILEKEGYHVETSASGQIALERL----QDENYG-------L 50
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ITD MPGM+G E+LK IK EVPV+I++ + ++ GA +YI KP
Sbjct: 51 VITDLKMPGMSGMEVLKAIKVLQP--EVPVIIITGFSTVDTAVEAMKNGAFDYIAKP 105
>UNIPROTKB|Q8EC92 [details] [associations]
symbol:cheV "Chemotaxis signal transduction system response
regulator CheV" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 InterPro:IPR002545
Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851
SMART:SM00260 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0016740 GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 SUPFAM:SSF50341
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
OMA:QVSRCLQ RefSeq:NP_718806.1 ProteinModelPortal:Q8EC92
GeneID:1170945 KEGG:son:SO_3252 PATRIC:23526188
ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 138 (53.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL-GLDGEQSNVGFDALKV 149
++ H++ +DDS V RK I R L+ + ++ + G AL L + E +NV A ++
Sbjct: 176 TQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAIASEMNNV---ADEI 232
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVK 207
LII+D MP M GY L +I++ + + VV+ +S V Q + GA ++I K
Sbjct: 233 PLIISDIEMPEMDGYTLTAEIRDDPKLKNIKVVLHTSLSGVFNQA-MVQKVGANDFIAK 290
>TIGR_CMR|SO_3252 [details] [associations]
symbol:SO_3252 "chemotaxis protein CheV" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0016740 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
SUPFAM:SSF50341 HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181
PIRSF:PIRSF002867 OMA:QVSRCLQ RefSeq:NP_718806.1
ProteinModelPortal:Q8EC92 GeneID:1170945 KEGG:son:SO_3252
PATRIC:23526188 ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 138 (53.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL-GLDGEQSNVGFDALKV 149
++ H++ +DDS V RK I R L+ + ++ + G AL L + E +NV A ++
Sbjct: 176 TQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAIASEMNNV---ADEI 232
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVK 207
LII+D MP M GY L +I++ + + VV+ +S V Q + GA ++I K
Sbjct: 233 PLIISDIEMPEMDGYTLTAEIRDDPKLKNIKVVLHTSLSGVFNQA-MVQKVGANDFIAK 290
>UNIPROTKB|Q7D1A8 [details] [associations]
symbol:cheY "Chemotaxis receiver protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0006928 "cellular component
movement" evidence=IGC] [GO:0052143 "chemotaxis on or near host
involved in symbiotic interaction" evidence=IGC] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0006928 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:AE007869 GenomeReviews:AE007869_GR
GO:GO:0052143 KO:K03413 ProtClustDB:CLSK881447 HSSP:P06143
RefSeq:NP_353545.1 ProteinModelPortal:Q7D1A8 STRING:Q7D1A8
GeneID:1132554 KEGG:atu:Atu0516 PATRIC:20810735 OMA:KNDRYRA
Uniprot:Q7D1A8
Length = 121
Score = 121 (47.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/113 (27%), Positives = 58/113 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS R ++ L + + E G L+ L EQSN ++I+TD
Sbjct: 5 VLTVDDSRTIRNMLLVTLNNAGFETIQAEDGIEGLEVL----EQSNP-------DVIVTD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + G+ ++ ++ + +R +P++++++E + + + GA +IVKP
Sbjct: 54 INMPRLDGFGFIEGVRRNEKYRAIPILVLTTESDAEKKNRARQAGATGWIVKP 106
>NCBI_NP|NP_353545.1 [details] [associations]
symbol:cheY "chemotaxisreceiverprotein" species:176299
"Agrobacterium fabrum str. C58" [GO:0052143 "chemotaxis on or near
host involved in symbiotic interaction" evidence=IGC] [GO:0006928
"cellular component movement" evidence=IGC] REFSEQ:NC_003062
Ncbi:NP_353545
Length = 121
Score = 121 (47.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/113 (27%), Positives = 58/113 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS R ++ L + + E G L+ L EQSN ++I+TD
Sbjct: 5 VLTVDDSRTIRNMLLVTLNNAGFETIQAEDGIEGLEVL----EQSNP-------DVIVTD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + G+ ++ ++ + +R +P++++++E + + + GA +IVKP
Sbjct: 54 INMPRLDGFGFIEGVRRNEKYRAIPILVLTTESDAEKKNRARQAGATGWIVKP 106
>TIGR_CMR|GSU_1316 [details] [associations]
symbol:GSU_1316 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003018
InterPro:IPR001789 Pfam:PF00072 Pfam:PF13185 PROSITE:PS50110
SMART:SM00065 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_952369.1
ProteinModelPortal:Q74DK0 DNASU:2685737 GeneID:2685737
KEGG:gsu:GSU1316 PATRIC:22025407 HOGENOM:HOG000276092 OMA:NMVLTDI
ProtClustDB:CLSK828294 BioCyc:GSUL243231:GH27-1295-MONOMER
Uniprot:Q74DK0
Length = 324
Score = 138 (53.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 42/117 (35%), Positives = 62/117 (52%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+ VL VD+S R I L+ VT+V SG A+ E + FD ++
Sbjct: 6 EIQVLVVDESAPSRAFIASTLENGGYIVTSVASGEEAVH------EVNAAPFD-----IL 54
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+TD +PGM+G LLK +K+S EV V++ S+ T I + L GA ++I+KPV
Sbjct: 55 VTDINLPGMSGLNLLKLLKDSFPDLEV-VIVTSNASSFTAIKA-LRLGAYDFIIKPV 109
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + VL V++ R ++ LL+ S +V +G +A + L E N D +
Sbjct: 76 RTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL----EDLNNHID-----I 126
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++T+ MP ++G LL KI R +PV++MSS D + + CL +GA +++VKP++
Sbjct: 127 VLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRK 186
Query: 212 SD 213
++
Sbjct: 187 NE 188
>UNIPROTKB|Q8EEQ6 [details] [associations]
symbol:cheY "Chemotaxis signal transduction system response
regulator CheY" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:KLANYKF
HSSP:P06143 RefSeq:NP_717910.1 ProteinModelPortal:Q8EEQ6
GeneID:1170042 KEGG:son:SO_2318 PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 120 (47.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS R ++ L+ + +V G AL L D K+NLII+D
Sbjct: 4 ILVVDDSASIRHVVSIALRGAGYEVIDACDGKDALSKLNGD-----------KINLIISD 52
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G LK++K+ ++ PV+++++E +++ GA+ ++VKP
Sbjct: 53 VNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVVKP 105
>TIGR_CMR|SO_2318 [details] [associations]
symbol:SO_2318 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
OMA:KLANYKF HSSP:P06143 RefSeq:NP_717910.1
ProteinModelPortal:Q8EEQ6 GeneID:1170042 KEGG:son:SO_2318
PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 120 (47.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS R ++ L+ + +V G AL L D K+NLII+D
Sbjct: 4 ILVVDDSASIRHVVSIALRGAGYEVIDACDGKDALSKLNGD-----------KINLIISD 52
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G LK++K+ ++ PV+++++E +++ GA+ ++VKP
Sbjct: 53 VNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVVKP 105
>UNIPROTKB|Q48P87 [details] [associations]
symbol:pilG "Type IV pilus response regulator PilG"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0009297 "pilus assembly" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 GO:GO:0009297
RefSeq:YP_272782.1 ProteinModelPortal:Q48P87 STRING:Q48P87
GeneID:3558225 KEGG:psp:PSPPH_0479 PATRIC:19969990 KO:K02657
OMA:CDILMPR ProtClustDB:CLSK821914 Uniprot:Q48P87
Length = 136
Score = 119 (46.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/115 (28%), Positives = 54/115 (46%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L V+ +DDS R+ E LL+ + C+V G AL + D +I
Sbjct: 8 LKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIA-DNHP----------RIIF 56
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP + GY+ IK + F+ PV+++SS+D L G+++++ KP
Sbjct: 57 VDIMMPRLDGYQTCALIKNNRAFKSTPVIMLSSKDGLFDKAKGRIVGSDQFLTKP 111
>UNIPROTKB|Q8EF67 [details] [associations]
symbol:cheY "Chemotaxis signal transduction system response
regulator CheY" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
OMA:FDVTEAC RefSeq:NP_717723.1 ProteinModelPortal:Q8EF67
GeneID:1169863 KEGG:son:SO_2120 PATRIC:23523858
ProtClustDB:CLSK906601 Uniprot:Q8EF67
Length = 121
Score = 119 (46.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS R+++E L+ ++ +VT + G AL S+ FD I+TD
Sbjct: 5 ILIVDDSAAIRQMVEATLKSANYQVTLAKDGREALDLC------SSQRFD-----FILTD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSE---DVLTQIDSCLEEGAEEYIVKP 208
MP M G L+K ++ S F P++++++E D+ Q + GA ++VKP
Sbjct: 54 QNMPRMDGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAV---GATGWMVKP 106
>TIGR_CMR|GSU_2212 [details] [associations]
symbol:GSU_2212 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_953261.1 ProteinModelPortal:Q74AY7 GeneID:2687085
KEGG:gsu:GSU2212 PATRIC:22027279 OMA:SSAMRRQ ProtClustDB:CLSK924580
BioCyc:GSUL243231:GH27-2150-MONOMER Uniprot:Q74AY7
Length = 128
Score = 119 (46.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 93 ELHVLAVDDSYVDRKLIE-RLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
E VL V+DS R+LI L +I ++ VE+ G+DG + A ++L
Sbjct: 3 EKTVLIVEDSPTMRQLIAFALKRIPG--ISIVEASD------GVDGLKK---LSAHAIDL 51
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
I+TD MP M G +L+ ++ R +P+ I+++E + L GA YI KP++
Sbjct: 52 ILTDINMPVMDGLKLVSLVRSDPSHRHLPIAIITTEGAAEDRERALALGANAYITKPIQ 110
>TIGR_CMR|SO_2120 [details] [associations]
symbol:SO_2120 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P06143 OMA:FDVTEAC RefSeq:NP_717723.1
ProteinModelPortal:Q8EF67 GeneID:1169863 KEGG:son:SO_2120
PATRIC:23523858 ProtClustDB:CLSK906601 Uniprot:Q8EF67
Length = 121
Score = 119 (46.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS R+++E L+ ++ +VT + G AL S+ FD I+TD
Sbjct: 5 ILIVDDSAAIRQMVEATLKSANYQVTLAKDGREALDLC------SSQRFD-----FILTD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSE---DVLTQIDSCLEEGAEEYIVKP 208
MP M G L+K ++ S F P++++++E D+ Q + GA ++VKP
Sbjct: 54 QNMPRMDGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAV---GATGWMVKP 106
>TIGR_CMR|BA_3261 [details] [associations]
symbol:BA_3261 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_845560.1 RefSeq:YP_019897.1 RefSeq:YP_029285.1
ProteinModelPortal:Q81NE3 DNASU:1089115
EnsemblBacteria:EBBACT00000011389 EnsemblBacteria:EBBACT00000014025
EnsemblBacteria:EBBACT00000020758 GeneID:1089115 GeneID:2818827
GeneID:2853015 KEGG:ban:BA_3261 KEGG:bar:GBAA_3261 KEGG:bat:BAS3028
OMA:FELCKKM ProtClustDB:CLSK916983
BioCyc:BANT260799:GJAJ-3090-MONOMER
BioCyc:BANT261594:GJ7F-3193-MONOMER Uniprot:Q81NE3
Length = 225
Score = 132 (51.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/117 (30%), Positives = 61/117 (52%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K +H+L DD R+L+ LQ KV E G A + L E+ N+ +L
Sbjct: 2 KMIHILLADDDKHIRELLHYHLQKEGFKVFEAEDGKVAQEVL----EKENI-------HL 50
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I D MP + GY L ++I++ + ++PV++++++D L + G ++YIVKP
Sbjct: 51 AIVDIMMPFVDGYTLCEEIRK---YHDIPVILLTAKDQLVDKEKGFISGTDDYIVKP 104
>UNIPROTKB|Q3ADB1 [details] [associations]
symbol:cheY1 "Chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 RefSeq:YP_359873.1 ProteinModelPortal:Q3ADB1
STRING:Q3ADB1 GeneID:3728270 KEGG:chy:CHY_1026 PATRIC:21275187
OMA:GATAWIT BioCyc:CHYD246194:GJCN-1025-MONOMER Uniprot:Q3ADB1
Length = 120
Score = 118 (46.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+LA+DDS + I+ L +V G+ AL LG + K +LIITD
Sbjct: 4 ILALDDSATMLQSIKISLLRKGHQVATFTKGSEALDMLGKE-----------KFDLIITD 52
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G ++K++ S ++ PV+++++E + + GA +I KP
Sbjct: 53 LNMPEMDGITFIQKVRALSNYKFTPVIVLTTESQAAKKEQARRAGATAWITKP 105
>TIGR_CMR|CHY_1026 [details] [associations]
symbol:CHY_1026 "chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 RefSeq:YP_359873.1
ProteinModelPortal:Q3ADB1 STRING:Q3ADB1 GeneID:3728270
KEGG:chy:CHY_1026 PATRIC:21275187 OMA:GATAWIT
BioCyc:CHYD246194:GJCN-1025-MONOMER Uniprot:Q3ADB1
Length = 120
Score = 118 (46.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+LA+DDS + I+ L +V G+ AL LG + K +LIITD
Sbjct: 4 ILALDDSATMLQSIKISLLRKGHQVATFTKGSEALDMLGKE-----------KFDLIITD 52
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G ++K++ S ++ PV+++++E + + GA +I KP
Sbjct: 53 LNMPEMDGITFIQKVRALSNYKFTPVIVLTTESQAAKKEQARRAGATAWITKP 105
>TIGR_CMR|GSU_0403 [details] [associations]
symbol:GSU_0403 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_951462.1 ProteinModelPortal:Q74G46 GeneID:2685717
KEGG:gsu:GSU0403 PATRIC:22023550 OMA:MEGKSID ProtClustDB:CLSK827806
BioCyc:GSUL243231:GH27-435-MONOMER Uniprot:Q74G46
Length = 120
Score = 118 (46.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAV-ESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+VL VDDS RK+I R L+ + V + E+G G++G NV V+LI+
Sbjct: 3 NVLIVDDSSTMRKIISRSLRQAGLPVDEIFEAGD------GIEG--LNV-LSGKSVDLIL 53
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+D MP M G E +K+ + + + P+V++++E + + GA + I KP
Sbjct: 54 SDINMPNMDGLEFIKQARANG--HKAPIVMITTEGGEDILKEAISSGASDSIKKP 106
>UNIPROTKB|Q0PBM1 [details] [associations]
symbol:cheV "Chemotaxis protein" species:192222
"Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110
PROSITE:PS50851 SMART:SM00260 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0016740 GO:GO:0005622 GO:GO:0006935
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341
EMBL:AL111168 GenomeReviews:AL111168_GR PIR:C81447
RefSeq:YP_002343726.1 ProteinModelPortal:Q0PBM1 IntAct:Q0PBM1
MINT:MINT-6484008 DNASU:904609 GeneID:904609 KEGG:cje:Cj0285c
PATRIC:20057489 HOGENOM:HOG000255027 KO:K03415 OMA:AKWIGIV
ProtClustDB:CLSK872487 BioCyc:CJEJ192222:GJTS-264-MONOMER
InterPro:IPR024181 PIRSF:PIRSF002867 Uniprot:Q0PBM1
Length = 318
Score = 129 (50.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLG----LDGEQSNVGFDALKVNLI 152
L +DDS RK ++ ++Q +V + G + L + GE N D LK+ I
Sbjct: 185 LILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGINKLEELSQIYGESLN---DTLKI--I 239
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVK 207
++D MP M G+ +IKE F+++P+V SS + E G E Y+VK
Sbjct: 240 VSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSNEFMNEKGVQEAGGEGYLVK 295
Score = 40 (19.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1 MNMKQYLQIFEPICVQFKP 19
+N+ +++QI EP KP
Sbjct: 74 VNLAKWMQITEPESTMLKP 92
>TIGR_CMR|CJE_0333 [details] [associations]
symbol:CJE_0333 "chemotaxis protein CheV" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0016740 GO:GO:0005622
GO:GO:0006935 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 eggNOG:COG0835
PIR:C81447 HOGENOM:HOG000255027 KO:K03415 OMA:AKWIGIV
ProtClustDB:CLSK872487 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:YP_178353.1 ProteinModelPortal:Q5HWI2 STRING:Q5HWI2
GeneID:3231095 KEGG:cjr:CJE0333 PATRIC:20042368
BioCyc:CJEJ195099:GJC0-338-MONOMER Uniprot:Q5HWI2
Length = 318
Score = 129 (50.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLG----LDGEQSNVGFDALKVNLI 152
L +DDS RK ++ ++Q +V + G + L + GE N D LK+ I
Sbjct: 185 LILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGINKLEELSQIYGESLN---DTLKI--I 239
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVK 207
++D MP M G+ +IKE F+++P+V SS + E G E Y+VK
Sbjct: 240 VSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSNEFMNEKGVQEAGGEGYLVK 295
Score = 40 (19.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1 MNMKQYLQIFEPICVQFKP 19
+N+ +++QI EP KP
Sbjct: 74 VNLAKWMQITEPESTMLKP 92
>DICTYBASE|DDB_G0282927 [details] [associations]
symbol:dhkL "histidine kinase L" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 dictyBase:DDB_G0282927
GO:GO:0005525 GO:GO:0005524 GenomeReviews:CM000153_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:AAFI02000049 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
EMBL:AF362373 EMBL:AF258796 RefSeq:XP_639305.1
ProteinModelPortal:Q54RP6 EnsemblProtists:DDB0191389 GeneID:8623876
KEGG:ddi:DDB_G0282927 OMA:FIERNDT Uniprot:Q54RP6
Length = 1709
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 35/121 (28%), Positives = 67/121 (55%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD++++ +++ ++LQ C+V +V SG AL + + S +DA I D
Sbjct: 1571 VLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKIN---QSSGDSYDA-----IFLD 1622
Query: 156 YTMPGMTGYELLKKIKESSVFREVP--VVIMSSEDVLTQID-SCLEEGAEEYIVKPVKLS 212
MP M G+++ +KI+E +P +I ++ +V + C + G +++I KP+K +
Sbjct: 1623 IQMPDMDGFQVSRKIREREKKFSLPRVAIIATTANVFKEDQLKCFDAGMDDFISKPIKRA 1682
Query: 213 D 213
+
Sbjct: 1683 E 1683
>UNIPROTKB|Q9WYT9 [details] [associations]
symbol:TM_0468 "Response regulator" species:243274
"Thermotoga maritima MSB8" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AE000512 GenomeReviews:AE000512_GR KO:K02485 EMBL:AGIJ01000001
PIR:D72374 RefSeq:NP_228278.1 PDB:3DGE PDB:3DGF PDB:3GL9
PDBsum:3DGE PDBsum:3DGF PDBsum:3GL9 IntAct:Q9WYT9 GeneID:897499
KEGG:tma:TM0468 PATRIC:23935833 OMA:WKRIPVI ProtClustDB:CLSK875163
EvolutionaryTrace:Q9WYT9 Uniprot:Q9WYT9
Length = 122
Score = 117 (46.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS V RK++ L+ +V E+G AL+ L +LI+ D
Sbjct: 5 VLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKLS-----------EFTPDLIVLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G+ +LKK++E ++ +PV++++++ L GA + + KP
Sbjct: 54 IMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKP 106
>TIGR_CMR|CPS_3065 [details] [associations]
symbol:CPS_3065 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819
RefSeq:YP_269763.1 ProteinModelPortal:Q47ZK7 STRING:Q47ZK7
GeneID:3520016 KEGG:cps:CPS_3065 PATRIC:21469133
ProtClustDB:CLSK938167 BioCyc:CPSY167879:GI48-3114-MONOMER
Uniprot:Q47ZK7
Length = 237
Score = 131 (51.2 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 34/121 (28%), Positives = 68/121 (56%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
++++H+L ++D +L E LQ + + T + G+ A+ + L +
Sbjct: 10 NEKMHILIIEDDKEIARLTEIYLQSTGYETTIIADGSLAIAMI-----------KKLSPD 58
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVKPV 209
LI+ D +PG+ G+EL K+ +E F P++++++ ED L+++ S L+ GA++Y+ KP
Sbjct: 59 LILLDLMLPGVDGFELCKQARE---FYNGPIIVLTAMEDDLSEV-SLLKLGADDYLRKPA 114
Query: 210 K 210
K
Sbjct: 115 K 115
>TIGR_CMR|GSU_0104 [details] [associations]
symbol:GSU_0104 "response regulator, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P10957 RefSeq:NP_951166.1
ProteinModelPortal:Q74GY9 GeneID:2688136 KEGG:gsu:GSU0104
PATRIC:22022954 OMA:NVAVARD ProtClustDB:CLSK309460
BioCyc:GSUL243231:GH27-65-MONOMER Uniprot:Q74GY9
Length = 129
Score = 116 (45.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 136 DGEQSNVG--FDA---LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
DGEQ+ VG F+A L L++ D +P M G E+L+ I+ R PV+++SS
Sbjct: 36 DGEQA-VGQLFEAAPPLDPWLVLLDLKLPKMNGLEVLRTIRSEERTRHTPVIVISSSQEE 94
Query: 191 TQIDSCLEEGAEEYIVKPV 209
T + C E G Y+ KP+
Sbjct: 95 TDVVKCRELGVLAYLTKPI 113
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 138 (53.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 86 TVAECSKE-LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF 144
TV E L VL VDD ++ER+L+ +VT AL L ++ GF
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL----RKNKHGF 83
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D ++I+D MP M G++LL+ + + ++PV++MS++D + + + GA +Y
Sbjct: 84 D-----IVISDVHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDY 135
Query: 205 IVKPVKL 211
++KPV++
Sbjct: 136 LIKPVRM 142
>TIGR_CMR|GSU_1038 [details] [associations]
symbol:GSU_1038 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_952091.1 ProteinModelPortal:Q74EC5 GeneID:2688721
KEGG:gsu:GSU1038 PATRIC:22024844 OMA:ECALENA
BioCyc:GSUL243231:GH27-1025-MONOMER Uniprot:Q74EC5
Length = 513
Score = 136 (52.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 36/114 (31%), Positives = 54/114 (47%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD V RK++ L +S +V E G RA++ F L +L++ D
Sbjct: 23 ILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEM-----------FRELSPDLVLLD 71
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP M GY I+ VP++IM++ D I + GA ++I KPV
Sbjct: 72 IMMPVMDGYGACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDFIEKPV 125
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 137 (53.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL VDD ++ER+L +VT AL L ++ GFD ++I
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLL----RKNKNGFD-----IVI 78
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+D MP M G++LL+ + + ++PV++MS++D + + + GA +Y++KPV++
Sbjct: 79 SDVHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRI 133
>ASPGD|ASPL0000016988 [details] [associations]
symbol:srrC species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:BN001302 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:AACD01000067 RefSeq:XP_661738.1
ProteinModelPortal:Q5B5P6 EnsemblFungi:CADANIAT00004538
GeneID:2873550 KEGG:ani:AN4134.2 HOGENOM:HOG000200821
OrthoDB:EOG412QGQ Uniprot:Q5B5P6
Length = 171
Score = 121 (47.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+H+L +D+ V++KL+ RLLQ SC V+ +G AL YL + + ++I+
Sbjct: 2 MHILVAEDNKVNQKLVTRLLQRLSCTVSIAHNGQEALDYLSASPATHH------RPDVIL 55
Query: 154 TDYTMPGMTGYELLKKIKESSVFR------EVPVVIMS--SEDVLTQIDSCLEEGAEEYI 205
D MP M G ++ S F P++ M+ S V Q + L+ G ++ +
Sbjct: 56 MDTAMPVMDGIRATSILRTSLPFTVDPKIPTTPIIAMTPISLRVPGQTEEWLKRGFDDVL 115
Query: 206 VKPVKL 211
KP +L
Sbjct: 116 PKPFRL 121
>TIGR_CMR|SO_3457 [details] [associations]
symbol:SO_3457 "sensor histidine kinase/response regulator"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HOGENOM:HOG000272329 OMA:ANQVISQ
ProtClustDB:PRK11107 InterPro:IPR019247 Pfam:PF09984
RefSeq:NP_719006.2 ProteinModelPortal:Q8EBQ2 GeneID:1171133
PATRIC:23526610 Uniprot:Q8EBQ2
Length = 935
Score = 138 (53.6 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
V + L VLAVDD++ + KLI+ LL V AV SG A++ + FD
Sbjct: 675 VPAARQSLTVLAVDDNFANLKLIDTLLNELVTTVIAVNSGEEAVK------QAKTRTFD- 727
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
LI D MPG G K+I++ S+ R P++ +++ + + + L G + Y+
Sbjct: 728 ----LIFMDIQMPGTDGISATKQIRQGSMNRNTPIIAVTAHAIAEERELILGSGMDGYLP 783
Query: 207 KPV 209
KP+
Sbjct: 784 KPI 786
>UNIPROTKB|Q52879 [details] [associations]
symbol:cheY1 "CheY1" species:382 "Sinorhizobium meliloti"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P06657 HOGENOM:HOG000034820 EMBL:U13166
GenomeReviews:AL591688_GR PIR:S61833 ProteinModelPortal:Q52879
IntAct:Q52879 PATRIC:23630491 ProtClustDB:CLSK881447 Uniprot:Q52879
Length = 121
Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS R ++ L + + E G L+ L D ++I+TD
Sbjct: 5 VLTVDDSRTIRNMLLVTLNNAGFETIQAEDGVEGLEKL-----------DTANPDVIVTD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + G+ ++ ++++ +R VP++++++E + + + GA +IVKP
Sbjct: 54 INMPRLDGFGFIEGVRKNDRYRAVPILVLTTESDAEKKNRARQAGATGWIVKP 106
>UNIPROTKB|Q74DM7 [details] [associations]
symbol:cheY34H-1 "Response receiver CheY associated with
MCPs of class 34H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P08402
RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7 GeneID:2688101
KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC ProtClustDB:CLSK828284
BioCyc:GSUL243231:GH27-1257-MONOMER Uniprot:Q74DM7
Length = 121
Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/115 (26%), Positives = 60/115 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
++ VDDS R+++ L+ + V VE+ +DG+ + +V+++ITD
Sbjct: 5 IMTVDDSASVRQMVSFTLKQNGYDV--VEA---------VDGKDALAKLAGTRVDMVITD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP + G L+K ++ + +R P+V++++E ++ GA +IVKP K
Sbjct: 54 LNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVKPFK 108
>TIGR_CMR|GSU_1289 [details] [associations]
symbol:GSU_1289 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P08402 RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7
GeneID:2688101 KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC
ProtClustDB:CLSK828284 BioCyc:GSUL243231:GH27-1257-MONOMER
Uniprot:Q74DM7
Length = 121
Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/115 (26%), Positives = 60/115 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
++ VDDS R+++ L+ + V VE+ +DG+ + +V+++ITD
Sbjct: 5 IMTVDDSASVRQMVSFTLKQNGYDV--VEA---------VDGKDALAKLAGTRVDMVITD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP + G L+K ++ + +R P+V++++E ++ GA +IVKP K
Sbjct: 54 LNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVKPFK 108
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/120 (29%), Positives = 70/120 (58%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL VDD K++E++L+ S +VT AL+ L E+ + G+D ++I
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLR---ERKD-GYD-----IVI 61
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+D MP M G++LL+ + + ++PV++MS + +++ ++ GA +Y++KP+++ +
Sbjct: 62 SDVNMPDMDGFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKE 118
>TIGR_CMR|BA_0994 [details] [associations]
symbol:BA_0994 "response regulator" species:198094
"Bacillus anthracis str. Ames" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR001932 Pfam:PF00072 Pfam:PF07228 PROSITE:PS50110
SMART:SM00331 SMART:SM00448 GO:GO:0003824 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008152 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF81606 HSSP:Q9A5I4
OMA:ERKWGDL RefSeq:NP_843495.1 RefSeq:YP_017622.1
RefSeq:YP_027204.1 ProteinModelPortal:Q81U90 DNASU:1088940
EnsemblBacteria:EBBACT00000010036 EnsemblBacteria:EBBACT00000013718
EnsemblBacteria:EBBACT00000020226 GeneID:1088940 GeneID:2814732
GeneID:2850195 KEGG:ban:BA_0994 KEGG:bar:GBAA_0994 KEGG:bat:BAS0930
HOGENOM:HOG000084736 ProtClustDB:CLSK916048
BioCyc:BANT260799:GJAJ-1008-MONOMER
BioCyc:BANT261594:GJ7F-1053-MONOMER Uniprot:Q81U90
Length = 380
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 28/119 (23%), Positives = 70/119 (58%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCK-VTAVESGTRALQYL--GLDGEQSNVGFDALKVN 150
+ +L VDD+ V+ +I+++L+ + + + ++ S +Y+ G D + N +++
Sbjct: 1 MSILIVDDNPVNIFVIKKILKQAGYQDLVSLNSAQELFEYIHFGKDSSRHN------EID 54
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
LI+ D MP + G E+ +++++ F+++P++ +++ + ++ L+ GA +YI KP+
Sbjct: 55 LILLDIMMPEIDGLEVCRRLQKEEKFKDIPIIFVTALEDANKLAEALDIGAMDYITKPI 113
>UNIPROTKB|Q9KS16 [details] [associations]
symbol:VC_1445 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198 RefSeq:NP_231088.1
ProteinModelPortal:Q9KS16 DNASU:2614077 GeneID:2614077
KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS ProtClustDB:CLSK874379
Uniprot:Q9KS16
Length = 572
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/122 (26%), Positives = 68/122 (55%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K H+L V+D+ ++ +I+ LL VT E+G +A++ L E+++V FD L
Sbjct: 452 KNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL----EKNHV-FD-----L 501
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++ D +MP M G K +++ + E+P++ +++ + +C++ G + ++KP++
Sbjct: 502 VLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRS 559
Query: 212 SD 213
D
Sbjct: 560 KD 561
>TIGR_CMR|VC_1445 [details] [associations]
symbol:VC_1445 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198
RefSeq:NP_231088.1 ProteinModelPortal:Q9KS16 DNASU:2614077
GeneID:2614077 KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS
ProtClustDB:CLSK874379 Uniprot:Q9KS16
Length = 572
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/122 (26%), Positives = 68/122 (55%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K H+L V+D+ ++ +I+ LL VT E+G +A++ L E+++V FD L
Sbjct: 452 KNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL----EKNHV-FD-----L 501
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++ D +MP M G K +++ + E+P++ +++ + +C++ G + ++KP++
Sbjct: 502 VLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRS 559
Query: 212 SD 213
D
Sbjct: 560 KD 561
>TIGR_CMR|BA_0996 [details] [associations]
symbol:BA_0996 "sensor histidine kinase/response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR003018 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 Pfam:PF13185 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00065 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 KO:K03407
HSSP:P52934 RefSeq:NP_843497.1 RefSeq:YP_017624.1
RefSeq:YP_027206.1 ProteinModelPortal:Q81U88 DNASU:1088076
EnsemblBacteria:EBBACT00000011936 EnsemblBacteria:EBBACT00000016656
EnsemblBacteria:EBBACT00000023286 GeneID:1088076 GeneID:2814798
GeneID:2849014 KEGG:ban:BA_0996 KEGG:bar:GBAA_0996 KEGG:bat:BAS0932
HOGENOM:HOG000084747 OMA:TNNVFQE ProtClustDB:CLSK916050
BioCyc:BANT260799:GJAJ-1010-MONOMER
BioCyc:BANT261594:GJ7F-1055-MONOMER InterPro:IPR007891 Pfam:PF05227
Uniprot:Q81U88
Length = 896
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/120 (25%), Positives = 61/120 (50%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+E ++ VDD + + ++ L+ + ++G L+ L ++N D L
Sbjct: 774 QEKTIMIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-----KNNTNID-----L 823
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
I+ D MP M GYE ++ I+ + E+P++ ++++ + + CL GA +YI KP+ L
Sbjct: 824 ILMDIMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPLNL 883
>UNIPROTKB|Q9KRI8 [details] [associations]
symbol:VC_1653 "Sensory box sensor histidine
kinase/response regulator VieS" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR001638
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00497 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50894 SMART:SM00062
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005215
GO:GO:0030288 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K07679 HSSP:Q56310
PIR:A82174 RefSeq:NP_231290.1 ProteinModelPortal:Q9KRI8
DNASU:2613784 GeneID:2613784 KEGG:vch:VC1653 PATRIC:20082368
OMA:IGCTANA ProtClustDB:CLSK874479 Uniprot:Q9KRI8
Length = 1146
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL DD ++R LI++ L T V G +A + L EQ +D L+IT
Sbjct: 919 HVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQ----YD-----LLIT 969
Query: 155 DYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP + G+ L +K+K E S+F+ VV ++ED + L+ G ++ I KP L++
Sbjct: 970 DCHMPHLDGFALTRKVKQEISLFKGA-VVGCTAEDSRLAAEQALQAGMDKVIYKPYTLAN 1028
>TIGR_CMR|VC_1653 [details] [associations]
symbol:VC_1653 "sensory box sensor histidine
kinase/response regulator VieS" species:686 "Vibrio cholerae O1
biovar El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001638 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497 Pfam:PF00512
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50894 SMART:SM00062 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005215 GO:GO:0030288 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07679 HSSP:Q56310 PIR:A82174 RefSeq:NP_231290.1
ProteinModelPortal:Q9KRI8 DNASU:2613784 GeneID:2613784
KEGG:vch:VC1653 PATRIC:20082368 OMA:IGCTANA ProtClustDB:CLSK874479
Uniprot:Q9KRI8
Length = 1146
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL DD ++R LI++ L T V G +A + L EQ +D L+IT
Sbjct: 919 HVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQ----YD-----LLIT 969
Query: 155 DYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP + G+ L +K+K E S+F+ VV ++ED + L+ G ++ I KP L++
Sbjct: 970 DCHMPHLDGFALTRKVKQEISLFKGA-VVGCTAEDSRLAAEQALQAGMDKVIYKPYTLAN 1028
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 133 (51.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VLAVDD K++E LL+ VT +AL+ L E N K +L+I
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLR---ENKN------KFDLVI 67
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+D MP M G++LL+ + + ++PV+++S+ + + GA +Y++KPV++ +
Sbjct: 68 SDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEE 124
>TIGR_CMR|SPO_1953 [details] [associations]
symbol:SPO_1953 "phosphate regulon transcriptional
regulatory protein PhoB" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006817 "phosphate ion transport" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0006817 HOGENOM:HOG000034819 KO:K07657
TIGRFAMs:TIGR02154 RefSeq:YP_167188.1 ProteinModelPortal:Q5LS17
GeneID:3193549 KEGG:sil:SPO1953 PATRIC:23377237 OMA:STLMEKP
ProtClustDB:CLSK933701 Uniprot:Q5LS17
Length = 229
Score = 126 (49.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/115 (27%), Positives = 62/115 (53%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL V+D R+++ L+ +V E+G A+ L +D + ++ I+ D
Sbjct: 8 VLVVEDEMAQREVLAYNLEAEGFRVIRAENGEEAM--LLVDEDTPDI---------IVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC--LEEGAEEYIVKP 208
+ MP ++G E+ +++K R +PV+++S+ ++D LE GA++Y+VKP
Sbjct: 57 WMMPNLSGIEVCRRLKTRPETRSIPVIMLSARS--EEVDKVRGLETGADDYVVKP 109
>UNIPROTKB|Q0C4H5 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CP000158
GenomeReviews:CP000158_GR KO:K03413 RefSeq:YP_759368.1
ProteinModelPortal:Q0C4H5 STRING:Q0C4H5 GeneID:4290241
KEGG:hne:HNE_0639 PATRIC:32214082 OMA:WNMPVMN
BioCyc:HNEP228405:GI69-682-MONOMER Uniprot:Q0C4H5
Length = 121
Score = 110 (43.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
L VDDS V RK+ R+++ VT G AL+ +S DA I+ D+
Sbjct: 5 LVVDDSRVVRKVASRIVRDLGFSVTEAGDGAEALKMC----RESMP--DA-----ILLDW 53
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G + L+ ++ + +V S E+ I+ L GA+E+I+KP
Sbjct: 54 NMPTMNGIDFLRALRREEGGKVPRIVFCSIENDPEHINEALRSGADEFIMKP 105
>TIGR_CMR|GSU_1286 [details] [associations]
symbol:GSU_1286 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 RefSeq:NP_952339.1
ProteinModelPortal:Q74DN0 GeneID:2686542 KEGG:gsu:GSU1286
PATRIC:22025343 OMA:CMDIMMP ProtClustDB:CLSK2522233
BioCyc:GSUL243231:GH27-1254-MONOMER Uniprot:Q74DN0
Length = 131
Score = 110 (43.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKV-TAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L V+D ++ RK+++ LL + C + T E +A + L LD + +D L
Sbjct: 1 MKTLIVEDDFISRKIMKELLTSLGECDIATDGEEAVQAFR-LALDEHRP---YD-----L 51
Query: 152 IITDYTMPGMTGYELLKKIKES------SVFREVPVVIMSS-EDVLTQIDSCLEEGAEEY 204
+ D MP M G+E L++I+E + +EV V++ ++ +D +++ GA Y
Sbjct: 52 VCMDIMMPNMDGHEALEQIREIERGMGLNGAQEVKVIMTTALDDPKNVVEAFYRGGATSY 111
Query: 205 IVKPV 209
+VKP+
Sbjct: 112 LVKPI 116
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 132 (51.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 31/120 (25%), Positives = 62/120 (51%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L D+ + LL S +VTAV+S + + L +G +++I+
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPD---------IDIIL 69
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+ +P G ++L+ I R +PV++MS +D + + CL+ GA +Y+VKP++ ++
Sbjct: 70 AEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNE 129
>UNIPROTKB|Q48ND2 [details] [associations]
symbol:cheY1 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_273089.1
ProteinModelPortal:Q48ND2 STRING:Q48ND2 GeneID:3556464
KEGG:psp:PSPPH_0807 PATRIC:19970685 OMA:KLANYKF
ProtClustDB:CLSK642719 Uniprot:Q48ND2
Length = 122
Score = 109 (43.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 30/113 (26%), Positives = 59/113 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS R+++ + + S +E+ DG+ + KV+LII+D
Sbjct: 5 VLVVDDSSSVRQVVG--IALKSAGYDVIEA---------CDGKDALGKLTGQKVHLIISD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G +K++K+ + ++ P++++++E ++ GA+ ++VKP
Sbjct: 54 VNMPNMDGITFVKEVKKLASYKFTPIIMLTTESQESKKAEGQAAGAKAWVVKP 106
>UNIPROTKB|Q9KPC0 [details] [associations]
symbol:VC_2453 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 49/175 (28%), Positives = 82/175 (46%)
Query: 40 GAPTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRGF-PFWAMATVAECSKE---LH 95
G P+ A L Q + + K + + KK +T P A ++ + + L
Sbjct: 609 GVPSTELALADQLMQRYPV--KCISKPLSRKKLLQTLAAQQPQLANTSLPKPQADKLPLC 666
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+AVDD+ + KLI LLQ V + SG A++ QS FD +I+ D
Sbjct: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQA-----QSRQ-FD-----IILMD 715
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M G K IK+ +R+ PV+ +++ + + D L+ G ++Y+ KP++
Sbjct: 716 IQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIE 770
>TIGR_CMR|VC_2453 [details] [associations]
symbol:VC_2453 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 49/175 (28%), Positives = 82/175 (46%)
Query: 40 GAPTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRGF-PFWAMATVAECSKE---LH 95
G P+ A L Q + + K + + KK +T P A ++ + + L
Sbjct: 609 GVPSTELALADQLMQRYPV--KCISKPLSRKKLLQTLAAQQPQLANTSLPKPQADKLPLC 666
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+AVDD+ + KLI LLQ V + SG A++ QS FD +I+ D
Sbjct: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQA-----QSRQ-FD-----IILMD 715
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M G K IK+ +R+ PV+ +++ + + D L+ G ++Y+ KP++
Sbjct: 716 IQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIE 770
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 130 (50.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 35/120 (29%), Positives = 64/120 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VLAVDD ++++ LLQ VT AL+ L E N K +L+I
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLR---ENKN------KFDLVI 67
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+D MP M G++LL+ + + ++PV+++S+ + ++ GA +Y++KPV++ +
Sbjct: 68 SDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEE 124
>TIGR_CMR|BA_5581 [details] [associations]
symbol:BA_5581 "stage 0 sporulation protein F"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030436 "asexual sporulation" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016740 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K02490
ProtClustDB:CLSK873695 RefSeq:NP_847737.1 RefSeq:YP_022251.1
RefSeq:YP_031424.1 HSSP:P06628 ProteinModelPortal:Q81JW3 SMR:Q81JW3
DNASU:1085276 EnsemblBacteria:EBBACT00000010293
EnsemblBacteria:EBBACT00000016210 EnsemblBacteria:EBBACT00000023627
GeneID:1085276 GeneID:2814845 GeneID:2853145 KEGG:ban:BA_5581
KEGG:bar:GBAA_5581 KEGG:bat:BAS5185 OMA:EADGAMD
BioCyc:BANT260799:GJAJ-5260-MONOMER
BioCyc:BANT261594:GJ7F-5440-MONOMER Uniprot:Q81JW3
Length = 122
Score = 108 (43.1 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD Y R L+ + Q + +G +AL + D +L++ D
Sbjct: 5 ILIVDDQYGIRVLLHEVFQKEGYQTFQAANGFQALDIVKKDNP-----------DLVVLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+PGM G E+LK +KE + + V++M++ L I + GA + KP + +
Sbjct: 54 MKIPGMDGIEILKHVKE--IDESIKVILMTAYGELDMIQEAKDLGALMHFAKPFDIDE 109
>UNIPROTKB|Q0PBM2 [details] [associations]
symbol:cheA "Chemotaxis histidine kinase" species:192222
"Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560 SUPFAM:SSF50341
EMBL:AL111168 GenomeReviews:AL111168_GR OMA:CDHGIED
ProtClustDB:CLSK872488 PIR:B81447 RefSeq:YP_002343725.1
ProteinModelPortal:Q0PBM2 IntAct:Q0PBM2 GeneID:904608
KEGG:cje:Cj0284c PATRIC:20057487 HOGENOM:HOG000255264
BioCyc:CJEJ192222:GJTS-263-MONOMER Uniprot:Q0PBM2
Length = 769
Score = 131 (51.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E + VL VDDS +DR L+++ L+ + +G AL + GE DA+
Sbjct: 642 EQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEALNIIK-SGEHD---IDAML 697
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M GY L +I++ S +R +P++ ++S T +E G EYI KP
Sbjct: 698 I-----DIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGMTEYITKP 752
>UNIPROTKB|Q5HWI3 [details] [associations]
symbol:cheA "Chemotaxis protein CheA" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0016301 GO:GO:0004871
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560
SUPFAM:SSF50341 OMA:CDHGIED ProtClustDB:CLSK872488
HOGENOM:HOG000255264 RefSeq:YP_178352.1 ProteinModelPortal:Q5HWI3
STRING:Q5HWI3 GeneID:3231094 KEGG:cjr:CJE0332 PATRIC:20042366
BioCyc:CJEJ195099:GJC0-337-MONOMER Uniprot:Q5HWI3
Length = 769
Score = 131 (51.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E + VL VDDS +DR L+++ L+ + +G AL + GE DA+
Sbjct: 642 EQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEALNIIK-SGEHD---IDAML 697
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M GY L +I++ S +R +P++ ++S T +E G EYI KP
Sbjct: 698 I-----DIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGMTEYITKP 752
>TIGR_CMR|CJE_0332 [details] [associations]
symbol:CJE_0332 "chemotaxis protein CheA" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0016301 GO:GO:0004871
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560
SUPFAM:SSF50341 OMA:CDHGIED ProtClustDB:CLSK872488
HOGENOM:HOG000255264 RefSeq:YP_178352.1 ProteinModelPortal:Q5HWI3
STRING:Q5HWI3 GeneID:3231094 KEGG:cjr:CJE0332 PATRIC:20042366
BioCyc:CJEJ195099:GJC0-337-MONOMER Uniprot:Q5HWI3
Length = 769
Score = 131 (51.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E + VL VDDS +DR L+++ L+ + +G AL + GE DA+
Sbjct: 642 EQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEALNIIK-SGEHD---IDAML 697
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M GY L +I++ S +R +P++ ++S T +E G EYI KP
Sbjct: 698 I-----DIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGMTEYITKP 752
>UNIPROTKB|Q0BZW4 [details] [associations]
symbol:pleD "Response regulator PleD" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 GO:GO:0004871 SUPFAM:SSF55073 GO:GO:0016849
GO:GO:0009190 InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254
PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:CP000158 GenomeReviews:CP000158_GR KO:K02488
HOGENOM:HOG000167204 RefSeq:YP_760979.1 ProteinModelPortal:Q0BZW4
STRING:Q0BZW4 GeneID:4287816 KEGG:hne:HNE_2284 PATRIC:32217411
OMA:APRTINA BioCyc:HNEP228405:GI69-2306-MONOMER Uniprot:Q0BZW4
Length = 455
Score = 128 (50.1 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 33/114 (28%), Positives = 59/114 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD +R+L++ L+ V E+G +AL+ ++ N +I+ D
Sbjct: 5 ILVVDDIEANRRLLQAKLEAQYHTVLMAENGPQALEV----AQRENP-------EIILLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ +++K +PVV++++ + L GAE+++ KPV
Sbjct: 54 VMMPGMDGYEVCQRLKADPTTSYIPVVMVTALSEMEDRVKGLAAGAEDFLTKPV 107
>TIGR_CMR|GSU_2693 [details] [associations]
symbol:GSU_2693 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953738.1 ProteinModelPortal:Q749P9 GeneID:2687548
KEGG:gsu:GSU2693 PATRIC:22028241 OMA:VEMHRAR
BioCyc:GSUL243231:GH27-2669-MONOMER Uniprot:Q749P9
Length = 128
Score = 107 (42.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
++VL VDD ++ LL+ +VT+ G A+ + FD ++I
Sbjct: 4 INVLIVDDDVNFLYVLGLLLESKDLEVTSASRGAEAVDIV------RKTTFD-----MVI 52
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
TD++MPGM G EL +KE + ++PV++++ E I+ + G + KPV +
Sbjct: 53 TDFSMPGMNGLELAAAVKE--LHPDLPVMMVTCEVTSDLIEMATDVGICRVLDKPVNV 108
>TIGR_CMR|GSU_1658 [details] [associations]
symbol:GSU_1658 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 KO:K02488 HSSP:P06143 RefSeq:NP_952709.1
ProteinModelPortal:Q74CL4 GeneID:2685291 KEGG:gsu:GSU1658
PATRIC:22026165 HOGENOM:HOG000131459 OMA:NINFLEE
ProtClustDB:CLSK924527 BioCyc:GSUL243231:GH27-1650-MONOMER
Uniprot:Q74CL4
Length = 458
Score = 127 (49.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L V+D R++ LL+ +V V SGT L+ L + + +L+ITD
Sbjct: 4 ILVVEDDRFFRQMYVDLLKEEGYEVDTVASGTEGLKRL-----------EKQEYHLVITD 52
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM+G E+L ++K+ + V V++++ L L+ GA +YI+KP
Sbjct: 53 LVMPGMSGIEVLSRVKQKAP--NVDVILVTGHANLESAVYALKNGARDYILKP 103
>UNIPROTKB|Q746Z1 [details] [associations]
symbol:GSU3376 "Response receiver-modulated diguanylate
cyclase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_954416.1 HSSP:P06143
ProteinModelPortal:Q746Z1 GeneID:2686891 KEGG:gsu:GSU3376
PATRIC:22029607 HOGENOM:HOG000167205 OMA:LTHLHNR
ProtClustDB:CLSK829255 BioCyc:GSUL243231:GH27-3335-MONOMER
Uniprot:Q746Z1
Length = 308
Score = 124 (48.7 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 36/113 (31%), Positives = 63/113 (55%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
L +DDS V R+ I R L+ + T +E+ GL+G ++ + KV+L++ D
Sbjct: 6 LVIDDSEVLREEIVRTLKEARLFETYLEARD------GLEGFKTLLNN---KVDLVLCDL 56
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVKP 208
MP M G+ L + +++P+++++S ED T+I LE+GA +Y+ KP
Sbjct: 57 EMPRMDGFRFLSMTRSRGELQDLPIILLTSREDRDTKIRG-LEQGASDYVTKP 108
>TIGR_CMR|GSU_3376 [details] [associations]
symbol:GSU_3376 "GGDEF/response regulator receiver domain
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_954416.1 HSSP:P06143
ProteinModelPortal:Q746Z1 GeneID:2686891 KEGG:gsu:GSU3376
PATRIC:22029607 HOGENOM:HOG000167205 OMA:LTHLHNR
ProtClustDB:CLSK829255 BioCyc:GSUL243231:GH27-3335-MONOMER
Uniprot:Q746Z1
Length = 308
Score = 124 (48.7 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 36/113 (31%), Positives = 63/113 (55%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
L +DDS V R+ I R L+ + T +E+ GL+G ++ + KV+L++ D
Sbjct: 6 LVIDDSEVLREEIVRTLKEARLFETYLEARD------GLEGFKTLLNN---KVDLVLCDL 56
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVKP 208
MP M G+ L + +++P+++++S ED T+I LE+GA +Y+ KP
Sbjct: 57 EMPRMDGFRFLSMTRSRGELQDLPIILLTSREDRDTKIRG-LEQGASDYVTKP 108
>TIGR_CMR|CHY_2047 [details] [associations]
symbol:CHY_2047 "DNA-binding response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 RefSeq:YP_360866.1
ProteinModelPortal:Q3AAG8 SMR:Q3AAG8 STRING:Q3AAG8 GeneID:3727851
KEGG:chy:CHY_2047 PATRIC:21277175 KO:K07658 OMA:WGYEFSG
ProtClustDB:CLSK2772343 BioCyc:CHYD246194:GJCN-2046-MONOMER
Uniprot:Q3AAG8
Length = 231
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/117 (29%), Positives = 61/117 (52%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDD +LI+ L+ KV G RAL+ + + +L+I
Sbjct: 1 MKILVVDDEAPIVELIKFNLEREGYKVLEAYDGIRALEIVKKE-----------LPDLVI 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL--EEGAEEYIVKP 208
D +PGM+G E+ K I+ + E+P++++S+ ++D L E GA++Y+VKP
Sbjct: 50 LDIMLPGMSGLEVCKNIRNNEKTAEIPIIMLSARG--EEVDKILGLELGADDYMVKP 104
>TIGR_CMR|SO_3196 [details] [associations]
symbol:SO_3196 "response regulator" species:211586
"Shewanella oneidensis MR-1" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P10958 RefSeq:NP_718751.1
ProteinModelPortal:Q8ECE7 GeneID:1170890 KEGG:son:SO_3196
PATRIC:23526076 HOGENOM:HOG000289704 OMA:GLLDWGK
ProtClustDB:CLSK907046 Uniprot:Q8ECE7
Length = 367
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/117 (28%), Positives = 63/117 (53%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++ +L V+D V R+++ L +V V++G DGEQ + F + ++I
Sbjct: 5 DVSILWVEDDPVFRQIVATFLSGRGAQV--VQAG---------DGEQGLIHFKQQRFDII 53
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+ D +MP + G ++LK++ + VP +++S +V+ + L GA +Y+VKPV
Sbjct: 54 LADLSMPKLGGLDMLKEMSKLEPL--VPSIVISGNNVMADVVEALRIGACDYLVKPV 108
>TIGR_CMR|GSU_1129 [details] [associations]
symbol:GSU_1129 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_952182.1 ProteinModelPortal:Q74E35 GeneID:2687644
KEGG:gsu:GSU1129 PATRIC:22025020 OMA:YEFANII ProtClustDB:CLSK828199
BioCyc:GSUL243231:GH27-1139-MONOMER Uniprot:Q74E35
Length = 453
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/118 (29%), Positives = 61/118 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R+ + LL+ + V + +G+ A Q L D FD ++ITD
Sbjct: 7 ILLIDDEETGREALTLLLKAAGHAVKSAGAGSEAFQTLTRDT------FD-----IVITD 55
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+P +G ++LKK+KE + EV ++I T + + ++EGA +YI KP+ +
Sbjct: 56 LFLPDASGIDILKKVKEDAPLTEV-ILITGHASAETAVKA-MKEGAFDYITKPLNFDE 111
>TIGR_CMR|GSU_2581 [details] [associations]
symbol:GSU_2581 "sigma-54 dependent transcriptional
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025944 PROSITE:PS00688 HSSP:P06143 RefSeq:NP_953627.1
ProteinModelPortal:Q74A10 GeneID:2687775 KEGG:gsu:GSU2581
PATRIC:22028017 OMA:LTERIMA ProtClustDB:CLSK763211
BioCyc:GSUL243231:GH27-2558-MONOMER Uniprot:Q74A10
Length = 456
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/114 (32%), Positives = 62/114 (54%)
Query: 96 VLAVDDSYVDRKLIERLLQISS-CKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+LAVDD + ++E LL + +TAV SG +AL L E+ +V +L+I+
Sbjct: 6 ILAVDDDELSLLMLENLLADAGFAPLTAV-SGAQALALL----EREHV-------DLLIS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D M GM G ELL +++E + VPV+++++ + + GA +Y+ KP
Sbjct: 54 DLIMEGMNGLELLDRVRER--YPNVPVIVVTARGSVESAVEAMRRGAYDYLAKP 105
>TIGR_CMR|GSU_1320 [details] [associations]
symbol:GSU_1320 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 KO:K02481
HSSP:P06143 RefSeq:NP_952373.2 GeneID:2686471 KEGG:gsu:GSU1320
PATRIC:22025417 ProtClustDB:CLSK828298
BioCyc:GSUL243231:GH27-1307-MONOMER Uniprot:Q74DJ6
Length = 461
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/122 (34%), Positives = 60/122 (49%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
+AE + VL VDD R+++E LQ V SG L+ FD
Sbjct: 2 MAEERQPARVLIVDDDVSLRRVLEYNLQEEGYDVITAGSGEEGLRL-----------FDE 50
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
L++TD MPGM G+ LL++IK S V +VI + V T +D+ ++ GA +YI
Sbjct: 51 RSPALVVTDLKMPGMGGFRLLQEIKGRSPDTAV-IVITAFGAVETAVDA-MKAGAYDYIT 108
Query: 207 KP 208
KP
Sbjct: 109 KP 110
>TIGR_CMR|SO_0549 [details] [associations]
symbol:SO_0549 "chemotaxis protein CheY/response regulator
receiver domain protein" species:211586 "Shewanella oneidensis
MR-1" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P06657
KO:K03413 RefSeq:NP_716185.2 ProteinModelPortal:Q8EJB8
GeneID:1168418 KEGG:son:SO_0549 PATRIC:23520780
HOGENOM:HOG000221832 OMA:SEANDAH ProtClustDB:CLSK905805
Uniprot:Q8EJB8
Length = 265
Score = 122 (48.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCK-VTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++ VL VDDS + R +I+R + K +T E G +A++ + + N+ FD L
Sbjct: 144 DVRVLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAIELM-----RHNM-FD-----L 192
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
IITDY MP + G L + I+ S VP++++SSE + + + G KP
Sbjct: 193 IITDYNMPSVDGLALTQFIRSESQQSHVPILMVSSEANDAHLSNVSQAGVNALCDKP 249
>TIGR_CMR|DET_1540 [details] [associations]
symbol:DET_1540 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034815 RefSeq:YP_182238.1 ProteinModelPortal:Q3Z6B1
GeneID:3229185 KEGG:det:DET1540 PATRIC:21610100 OMA:ARIRCIL
ProtClustDB:CLSK741608 BioCyc:DETH243164:GJNF-1541-MONOMER
Uniprot:Q3Z6B1
Length = 225
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/117 (29%), Positives = 61/117 (52%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L ++D Y + I L+I VT + S +R L + EQ + NL+I
Sbjct: 1 MKILIIEDDYKIVQAISFALKIGWPDVTLL-SASRGESGLRMIEEQ--------RPNLVI 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D ++P M G E+LK ++ +F + P++I++ + + LE GA EYI+KP +
Sbjct: 52 LDLSLPDMDGLEVLK---DARLFCDTPIIILTVRSEESDVVEALELGANEYIIKPFR 105
>TAIR|locus:2084968 [details] [associations]
symbol:EIN4 "ETHYLENE INSENSITIVE 4" species:3702
"Arabidopsis thaliana" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=IEA;ISS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=TAS] [GO:0051740 "ethylene binding" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] InterPro:IPR003018 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR009082
InterPro:IPR014525 Pfam:PF00072 Pfam:PF00512 Pfam:PF01590
PIRSF:PIRSF026389 PROSITE:PS50110 SMART:SM00065 SMART:SM00388
SMART:SM00448 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 GO:GO:0006355
GO:GO:0005789 GO:GO:0046872 GO:GO:0004674 GO:GO:0004872
GO:GO:0023014 eggNOG:COG2202 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0010105 EMBL:AC011437
EMBL:AF048982 IPI:IPI00520406 RefSeq:NP_187108.1 RefSeq:NP_974218.1
UniGene:At.21286 HSSP:P49333 ProteinModelPortal:Q9ZTP3 SMR:Q9ZTP3
IntAct:Q9ZTP3 STRING:Q9ZTP3 PaxDb:Q9ZTP3 PRIDE:Q9ZTP3
EnsemblPlants:AT3G04580.1 EnsemblPlants:AT3G04580.2 GeneID:819614
KEGG:ath:AT3G04580 TAIR:At3g04580 HOGENOM:HOG000240343
InParanoid:Q9ZTP3 KO:K14509 OMA:VAISHAS PhylomeDB:Q9ZTP3
ProtClustDB:CLSN2684285 Genevestigator:Q9ZTP3 GO:GO:0051740
Uniprot:Q9ZTP3
Length = 766
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L + DD V+R + +RLL+ C+VTAV SG L L SNV + ++I
Sbjct: 642 LRITLADDDDVNRTVTKRLLEKLGCEVTAVSSGFECLNAL------SNV---EMSYRVVI 692
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIM---SSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+E+ KI++ P++I S+ED + + CL+ G I KPV
Sbjct: 693 LDLQMPEMDGFEVAMKIRKFCG-HHWPLIIALTASTEDHVRE--RCLQMGMNGMIQKPVL 749
Query: 211 L 211
L
Sbjct: 750 L 750
>TIGR_CMR|BA_4777 [details] [associations]
symbol:BA_4777 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_846982.1 RefSeq:YP_021423.1 RefSeq:YP_030680.1
ProteinModelPortal:Q81L55 DNASU:1083888
EnsemblBacteria:EBBACT00000012704 EnsemblBacteria:EBBACT00000017584
EnsemblBacteria:EBBACT00000020354 GeneID:1083888 GeneID:2815717
GeneID:2851624 KEGG:ban:BA_4777 KEGG:bar:GBAA_4777 KEGG:bat:BAS4433
OMA:DISIQEM ProtClustDB:CLSK917419
BioCyc:BANT260799:GJAJ-4490-MONOMER
BioCyc:BANT261594:GJ7F-4640-MONOMER Uniprot:Q81L55
Length = 230
Score = 120 (47.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L V+D ++++E+ L +VT G + L G FD LII
Sbjct: 4 HILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGVDTY-LKGS-----FD-----LIIL 52
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC--LEEGAEEYIVKPVKL 211
D MP + G E+++ I+E S VP+++MS++D T +D L GA++YI KP +
Sbjct: 53 DIMMPKLDGLEVVRIIREKSA---VPILMMSAKD--TDVDKAVGLGLGADDYICKPFSM 106
>UNIPROTKB|Q9KRN4 [details] [associations]
symbol:VC1602 "Chemotaxis protein CheV" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072
Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 KO:K03415
OMA:AKWIGIV InterPro:IPR024181 PIRSF:PIRSF002867 HSSP:P04042
EMBL:AE004237 PIR:A82180 RefSeq:NP_231242.1
ProteinModelPortal:Q9KRN4 DNASU:2613858 GeneID:2613858
KEGG:vch:VC1602 PATRIC:20082263 ProtClustDB:CLSK874446
Uniprot:Q9KRN4
Length = 328
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRA---LQYLGLDGEQSNVGFDALKVNLI 152
++ VDDS R LI+ L + + A + G A L L ++ NV L ++ +
Sbjct: 198 IMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSEL-IDAV 256
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD MP M G L+K++++ + +P+V+ SS L GA + + KP
Sbjct: 257 VTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKP 312
>TIGR_CMR|VC_1602 [details] [associations]
symbol:VC_1602 "chemotaxis protein CheV" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GenomeReviews:AE003852_GR GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 SUPFAM:SSF50341 KO:K03415 OMA:AKWIGIV
InterPro:IPR024181 PIRSF:PIRSF002867 HSSP:P04042 EMBL:AE004237
PIR:A82180 RefSeq:NP_231242.1 ProteinModelPortal:Q9KRN4
DNASU:2613858 GeneID:2613858 KEGG:vch:VC1602 PATRIC:20082263
ProtClustDB:CLSK874446 Uniprot:Q9KRN4
Length = 328
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRA---LQYLGLDGEQSNVGFDALKVNLI 152
++ VDDS R LI+ L + + A + G A L L ++ NV L ++ +
Sbjct: 198 IMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSEL-IDAV 256
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD MP M G L+K++++ + +P+V+ SS L GA + + KP
Sbjct: 257 VTDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKP 312
>UNIPROTKB|Q45976 [details] [associations]
symbol:divK "Cell division response regulator DivK"
species:155892 "Caulobacter vibrioides" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0051301 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:U13765 PIR:S58671 HSSP:Q9A5I4
ProteinModelPortal:Q45976 SMR:Q45976 DIP:DIP-46001N IntAct:Q45976
Uniprot:Q45976
Length = 125
Score = 104 (41.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL V+D+ ++ KL LL+ + G AL + N K +LI+ D
Sbjct: 5 VLIVEDNELNMKLFHDLLEAQGYETLQTREGLSALSIA-----REN------KPDLILMD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+P ++G E+ K +KE +PVV +++ + + E G E YI KP+ +
Sbjct: 54 IQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISV 109
>UNIPROTKB|Q74CN0 [details] [associations]
symbol:GSU1643 "Response receiver-modulated diguanylate
cyclase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P06143 HOGENOM:HOG000167205
ProtClustDB:CLSK740862 RefSeq:NP_952694.1 ProteinModelPortal:Q74CN0
GeneID:2687340 KEGG:gsu:GSU1643 PATRIC:22026135 OMA:CIRIIAG
BioCyc:GSUL243231:GH27-1627-MONOMER Uniprot:Q74CN0
Length = 316
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 123 VESGTRALQY---LGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREV 179
+E R + Y + +DG+ + + L+ITD+ MP M G EL + ++ +
Sbjct: 25 LEGNLREIGYDVVVAIDGKDALARIQSGYFPLVITDWVMPVMDGPELCRAVRSLGLEHYT 84
Query: 180 PVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+++++S D I S LE GA+EY+VKPV
Sbjct: 85 YLILLTSRDSKESIISGLEAGADEYLVKPV 114
>TIGR_CMR|GSU_1643 [details] [associations]
symbol:GSU_1643 "GGDEF/response regulator receiver domain
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P06143 HOGENOM:HOG000167205
ProtClustDB:CLSK740862 RefSeq:NP_952694.1 ProteinModelPortal:Q74CN0
GeneID:2687340 KEGG:gsu:GSU1643 PATRIC:22026135 OMA:CIRIIAG
BioCyc:GSUL243231:GH27-1627-MONOMER Uniprot:Q74CN0
Length = 316
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 123 VESGTRALQY---LGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREV 179
+E R + Y + +DG+ + + L+ITD+ MP M G EL + ++ +
Sbjct: 25 LEGNLREIGYDVVVAIDGKDALARIQSGYFPLVITDWVMPVMDGPELCRAVRSLGLEHYT 84
Query: 180 PVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+++++S D I S LE GA+EY+VKPV
Sbjct: 85 YLILLTSRDSKESIISGLEAGADEYLVKPV 114
>UNIPROTKB|Q9KRC3 [details] [associations]
symbol:VC_1719 "DNA-binding response regulator TorR"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P08402 KO:K07772
ProtClustDB:PRK10766 PIR:G82164 RefSeq:NP_231355.1
ProteinModelPortal:Q9KRC3 SMR:Q9KRC3 DNASU:2613724 GeneID:2613724
KEGG:vch:VC1719 PATRIC:20082498 OMA:WRISAAR Uniprot:Q9KRC3
Length = 234
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL V+D V R + Q +VT ESG + + L L+ ++L++
Sbjct: 4 HVLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALELND-----------IDLVLL 52
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +PG G L ++++ S E+ +++++ D + +I LE GA++Y+ KPV L +
Sbjct: 53 DINLPGEDGLLLTRELRSQS---EIGIILVTGRTDSIDKIVG-LEMGADDYVTKPVDLRE 108
>TIGR_CMR|VC_1719 [details] [associations]
symbol:VC_1719 "DNA-binding response regulator TorR"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P08402 KO:K07772
ProtClustDB:PRK10766 PIR:G82164 RefSeq:NP_231355.1
ProteinModelPortal:Q9KRC3 SMR:Q9KRC3 DNASU:2613724 GeneID:2613724
KEGG:vch:VC1719 PATRIC:20082498 OMA:WRISAAR Uniprot:Q9KRC3
Length = 234
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL V+D V R + Q +VT ESG + + L L+ ++L++
Sbjct: 4 HVLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALELND-----------IDLVLL 52
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +PG G L ++++ S E+ +++++ D + +I LE GA++Y+ KPV L +
Sbjct: 53 DINLPGEDGLLLTRELRSQS---EIGIILVTGRTDSIDKIVG-LEMGADDYVTKPVDLRE 108
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/117 (29%), Positives = 63/117 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L VDD ++E++L +VT AL L E+ + FD L++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILR---ERKD-SFD-----LVL 61
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+D MPGM GY LL+++ + ++PV++MS + T + + + GA +Y++KP++
Sbjct: 62 SDVHMPGMNGYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIR 116
>UNIPROTKB|O25153 [details] [associations]
symbol:C694_01990 "Histidine kinase CheA" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 InterPro:IPR002545
InterPro:IPR003594 InterPro:IPR004105 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF01584
Pfam:PF01627 Pfam:PF02518 Pfam:PF02895 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894 SMART:SM00073
SMART:SM00260 SMART:SM00387 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0006935 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
EMBL:AE000511 GenomeReviews:AE000511_GR KO:K03407
Gene3D:1.10.287.560 SUPFAM:SSF50341 EMBL:CP003904 PIR:H64568
RefSeq:NP_207190.1 RefSeq:YP_006934316.1 HSSP:Q56310 DIP:DIP-3162N
MINT:MINT-160605 GeneID:13869578 GeneID:898900 KEGG:heo:C694_01990
KEGG:hpy:HP0392 PATRIC:20592023 OMA:CDHGIED ProtClustDB:CLSK872488
Uniprot:O25153
Length = 803
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VLA+DDS DR +I + L+ +T +E+ GL+G + D + + I+ D
Sbjct: 679 VLAIDDSSTDRAIIRKCLK--PLGITLLEATN------GLEGLEMLKNGDKIP-DAILVD 729
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M GY ++++ + F+ +P++ ++S T +E G EYI KP
Sbjct: 730 IEMPKMDGYTFASEVRKYNKFKNLPLIAVTSRVTKTDRMRGVESGMTEYITKP 782
>TIGR_CMR|GSU_1495 [details] [associations]
symbol:GSU_1495 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_952546.1 ProteinModelPortal:Q74D24 GeneID:2686126
KEGG:gsu:GSU1495 PATRIC:22025837 KO:K02667 OMA:IHARAGH
ProtClustDB:CLSK828394 BioCyc:GSUL243231:GH27-1478-MONOMER
Uniprot:Q74D24
Length = 458
Score = 123 (48.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+HVL VDD R+ + LL V S AL L E+ +D L+
Sbjct: 2 EIHVLVVDDELSMREFLAILLDREGYTVDQAASAEEALACL----ERKT--YD-----LV 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
I+D MPG+ G LL +IKE + + V++M++ Q ++ GA +YI KP K+
Sbjct: 51 ISDVKMPGLDGITLLGRIKEMTP--DTAVLLMTAFSTAEQAVEAMKLGAYDYIAKPFKVE 108
Query: 213 D 213
+
Sbjct: 109 E 109
>UNIPROTKB|Q9KRK2 [details] [associations]
symbol:VC_1638 "DNA-binding response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P08402 KO:K02483 PIR:D82176
RefSeq:NP_231275.1 ProteinModelPortal:Q9KRK2 DNASU:2613769
GeneID:2613769 KEGG:vch:VC1638 PATRIC:20082340 OMA:YKVVAYF
ProtClustDB:CLSK874469 Uniprot:Q9KRK2
Length = 219
Score = 117 (46.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/104 (29%), Positives = 58/104 (55%)
Query: 108 LIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELL 167
++E +Q+ ++A+E T + L DG + A + ++I+ D +P + G +L
Sbjct: 5 VVEDDVQLGQQILSALEQ-TGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGLTVL 63
Query: 168 KKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
K I++ ++ PVVI+S+ D LTQ L GA++Y+ KP ++
Sbjct: 64 KGIRDENI--NTPVVILSARDTLTQRVEGLNAGADDYLTKPFEM 105
>TIGR_CMR|VC_1638 [details] [associations]
symbol:VC_1638 "DNA-binding response regulator" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P08402 KO:K02483 PIR:D82176
RefSeq:NP_231275.1 ProteinModelPortal:Q9KRK2 DNASU:2613769
GeneID:2613769 KEGG:vch:VC1638 PATRIC:20082340 OMA:YKVVAYF
ProtClustDB:CLSK874469 Uniprot:Q9KRK2
Length = 219
Score = 117 (46.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/104 (29%), Positives = 58/104 (55%)
Query: 108 LIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELL 167
++E +Q+ ++A+E T + L DG + A + ++I+ D +P + G +L
Sbjct: 5 VVEDDVQLGQQILSALEQ-TGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGLTVL 63
Query: 168 KKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
K I++ ++ PVVI+S+ D LTQ L GA++Y+ KP ++
Sbjct: 64 KGIRDENI--NTPVVILSARDTLTQRVEGLNAGADDYLTKPFEM 105
>TIGR_CMR|BA_2212 [details] [associations]
symbol:BA_2212 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034815 HSSP:Q9WYN0
RefSeq:NP_844604.1 RefSeq:YP_018854.1 RefSeq:YP_028319.1
ProteinModelPortal:Q81R46 DNASU:1085543
EnsemblBacteria:EBBACT00000012844 EnsemblBacteria:EBBACT00000018535
EnsemblBacteria:EBBACT00000022147 GeneID:1085543 GeneID:2815122
GeneID:2848498 KEGG:ban:BA_2212 KEGG:bar:GBAA_2212 KEGG:bat:BAS2056
OMA:IRATESK ProtClustDB:CLSK918052
BioCyc:BANT260799:GJAJ-2124-MONOMER
BioCyc:BANT261594:GJ7F-2201-MONOMER Uniprot:Q81R46
Length = 227
Score = 117 (46.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 28/118 (23%), Positives = 64/118 (54%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L V+D ++++ L+ + ++GT A++ G N +D LI+ D
Sbjct: 5 ILIVEDEEKIARVVQLELEFEGYESEIAKTGTEAMEKFG------NGNWD-----LILLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+P ++G E+L++I+ + +P++++++ D + S L++GA +YI KP ++ +
Sbjct: 54 VMLPNISGLEVLRRIRLKNAV--IPIILLTARDSVVDKVSGLDQGASDYITKPFQIEE 109
>TIGR_CMR|BA_1660 [details] [associations]
symbol:BA_1660 "chemotaxis response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
OMA:PFQAPKV RefSeq:NP_844107.1 RefSeq:YP_018295.1
RefSeq:YP_027808.1 HSSP:Q56312 ProteinModelPortal:Q81SI8 SMR:Q81SI8
DNASU:1083740 EnsemblBacteria:EBBACT00000009828
EnsemblBacteria:EBBACT00000015597 EnsemblBacteria:EBBACT00000020958
GeneID:1083740 GeneID:2817294 GeneID:2851539 KEGG:ban:BA_1660
KEGG:bar:GBAA_1660 KEGG:bat:BAS1541 ProtClustDB:CLSK916318
BioCyc:BANT260799:GJAJ-1613-MONOMER
BioCyc:BANT261594:GJ7F-1681-MONOMER Uniprot:Q81SI8
Length = 122
Score = 101 (40.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 35/115 (30%), Positives = 59/115 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISS-CKVTA-VESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L VDD+ R +I+ LL+ +S +V E+G A+Q + L+ +++
Sbjct: 5 ILVVDDAMFMRTMIKNLLKSNSEFEVIGEAENGVEAIQK-----------YKELQPDIVT 53
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D TMP M G E LK+I + + VVI S+ + ++ GA+++IVKP
Sbjct: 54 LDITMPEMDGLEALKEIIK--IDASAKVVICSAMGQQGMVLDAIKGGAKDFIVKP 106
>TIGR_CMR|DET_0170 [details] [associations]
symbol:DET_0170 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819
RefSeq:YP_180918.1 ProteinModelPortal:Q3ZA31 STRING:Q3ZA31
GeneID:3230558 KEGG:det:DET0170 PATRIC:21607423 OMA:RIRVNIR
ProtClustDB:CLSK741609 BioCyc:DETH243164:GJNF-170-MONOMER
Uniprot:Q3ZA31
Length = 232
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 137 GEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
GE + K + II D +P ++GYE+L++I+ +F E+PV+I++ + + I
Sbjct: 35 GESGLAMVETAKPDAIILDIGLPDISGYEVLRQIR---LFSELPVIILTIRNEESDIVKA 91
Query: 197 LEEGAEEYIVKPVK 210
L GA++Y+VKP +
Sbjct: 92 LSLGADDYLVKPFR 105
>UNIPROTKB|Q50806 [details] [associations]
symbol:trcR "Response regulator homolog TrcR" species:1773
"Mycobacterium tuberculosis" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0045892 GO:GO:0045893
GenomeReviews:AL123456_GR GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034815 HSSP:Q9WYN0
EMBL:AL123456 EMBL:U88959 PIR:D70624 RefSeq:NP_215549.1
RefSeq:YP_006514396.1 SMR:Q50806 EnsemblBacteria:EBMYCT00000001946
GeneID:13319598 GeneID:887957 KEGG:mtu:Rv1033c KEGG:mtv:RVBD_1033c
PATRIC:18150824 TubercuList:Rv1033c KO:K07672 OMA:IAHNGRE
ProtClustDB:CLSK790905 Uniprot:Q50806
Length = 257
Score = 118 (46.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 21/78 (26%), Positives = 47/78 (60%)
Query: 136 DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
DG+++ FD + ++++ D +P + G E+L++++ES V+ P + +++ D + +
Sbjct: 63 DGQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVY--TPTLFLTARDSVMDRVT 120
Query: 196 CLEEGAEEYIVKPVKLSD 213
L GA++Y+ KP L +
Sbjct: 121 GLTSGADDYMTKPFSLEE 138
>UNIPROTKB|P0AF28 [details] [associations]
symbol:narL "NarL" species:83333 "Escherichia coli K-12"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0042128 "nitrate assimilation"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA]
InterPro:IPR000792 InterPro:IPR001789 InterPro:IPR016032
Pfam:PF00072 Pfam:PF00196 PRINTS:PR00038 PROSITE:PS00622
PROSITE:PS50043 PROSITE:PS50110 SMART:SM00421 SMART:SM00448
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 SUPFAM:SSF46894 GO:GO:0042128 eggNOG:COG2197
HOGENOM:HOG000034813 EMBL:X69189 EMBL:X13360 EMBL:M24910
EMBL:X14884 PIR:S09285 RefSeq:NP_415739.1 RefSeq:YP_489491.1
PDB:1A04 PDB:1JE8 PDB:1RNL PDB:1ZG1 PDB:1ZG5 PDBsum:1A04
PDBsum:1JE8 PDBsum:1RNL PDBsum:1ZG1 PDBsum:1ZG5
ProteinModelPortal:P0AF28 SMR:P0AF28 DIP:DIP-35941N IntAct:P0AF28
PRIDE:P0AF28 EnsemblBacteria:EBESCT00000003408
EnsemblBacteria:EBESCT00000014443 GeneID:12932638 GeneID:945795
KEGG:ecj:Y75_p1196 KEGG:eco:b1221 PATRIC:32117700 EchoBASE:EB0637
EcoGene:EG10643 KO:K07684 OMA:NHEDDVV ProtClustDB:PRK10651
BioCyc:EcoCyc:NARL-MONOMER BioCyc:ECOL316407:JW1212-MONOMER
EvolutionaryTrace:P0AF28 Genevestigator:P0AF28 Uniprot:P0AF28
Length = 216
Score = 116 (45.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/120 (30%), Positives = 65/120 (54%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD + R +++L+ ++ +T V + +GEQ ++L +LI+ D
Sbjct: 9 ILLIDDHPMLRTGVKQLISMAP-DITVVGEAS--------NGEQGIELAESLDPDLILLD 59
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSS--EDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MPGM G E L K++E S+ + V +S+ EDV+T L+ GA+ Y++K ++ D
Sbjct: 60 LNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVT----ALKRGADGYLLKDMEPED 115
>UNIPROTKB|Q4K714 [details] [associations]
symbol:PFL_4888 "Sigma-54 dependent DNA-binding response
regulator" species:220664 "Pseudomonas protegens Pf-5" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0035556
"intracellular signal transduction" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
KO:K02481 RefSeq:YP_261969.1 ProteinModelPortal:Q4K714
STRING:Q4K714 GeneID:3479299 KEGG:pfl:PFL_4888 PATRIC:19879244
OMA:CVERATI ProtClustDB:CLSK937927
BioCyc:PFLU220664:GIX8-4929-MONOMER Uniprot:Q4K714
Length = 465
Score = 122 (48.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
++L VDD L+ L + +V +G AL+ L EQ ++ +L+I+
Sbjct: 4 NLLVVDDEPKLCDLLSSALSQNGIQVFTAGNGLHALKVL----EQEDI-------DLVIS 52
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D+ MPGM G +LL +IK+ + ++PV++M++ + + GA +YI KP + +
Sbjct: 53 DWRMPGMDGPQLLGEIKQR--YPQLPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDE 109
>ASPGD|ASPL0000049453 [details] [associations]
symbol:tcsB species:162425 "Emericella nidulans"
[GO:0004673 "protein histidine kinase activity" evidence=IGI;ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IGI;ISS] [GO:0007234 "osmosensory signaling via
phosphorelay pathway" evidence=IGI;ISS] [GO:0006468 "protein
phosphorylation" evidence=IGI;ISS] [GO:0005886 "plasma membrane"
evidence=IGI;ISS] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005034 "osmosensor activity" evidence=IEA]
[GO:0009927 "histidine phosphotransfer kinase activity"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0006469 "negative regulation of protein kinase
activity" evidence=IEA] [GO:0070795 "positive regulation of
conidiophore development" evidence=IEA] [GO:0070787 "conidiophore
development" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0005887
GO:GO:0006355 EMBL:BN001307 EMBL:AACD01000029 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000161 KO:K11231
OrthoDB:EOG4N8VCT EMBL:AB036054 RefSeq:XP_659404.1
ProteinModelPortal:Q9P4U6 STRING:Q9P4U6
EnsemblFungi:CADANIAT00008448 GeneID:2874961 KEGG:ani:AN1800.2
HOGENOM:HOG000185666 OMA:DQHRILQ Uniprot:Q9P4U6
Length = 1065
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 41 APTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECS----KELHV 96
A + P +S+ H TK++ +++ + + PF+A V + K++
Sbjct: 879 ASVTKAPSNHSVASQHES-TKSNAE-IQDSQPRLVGLSQPFFA-PPVPQAKDNGLKKIRA 935
Query: 97 LAVDDSYVDRKLIERLLQISSC-KVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
L +D+ V+++++ R+L + VT V+ G A + + E+ V FD LI D
Sbjct: 936 LVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKANMEEGKV-FD-----LIFMD 989
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMS--SEDVLTQIDSCLEEGAEEYIVKPVK 210
MP + G E + I++ P+V +S SED + I C+ G + +I KP++
Sbjct: 990 IQMPNLDGIESTRLIRQMGC--SAPIVALSAFSED--SNIKDCMNSGMDMFISKPIR 1042
>UNIPROTKB|Q9P4U6 [details] [associations]
symbol:tcsB "Two-component system protein B" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=IGI] [GO:0000156 "phosphorelay response
regulator activity" evidence=IGI] [GO:0000161 "MAPK cascade
involved in osmosensory signaling pathway" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0023014
"signal transduction by phosphorylation" evidence=IGI]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005887 GO:GO:0006355 EMBL:BN001307 EMBL:AACD01000029
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000161
KO:K11231 OrthoDB:EOG4N8VCT EMBL:AB036054 RefSeq:XP_659404.1
ProteinModelPortal:Q9P4U6 STRING:Q9P4U6
EnsemblFungi:CADANIAT00008448 GeneID:2874961 KEGG:ani:AN1800.2
HOGENOM:HOG000185666 OMA:DQHRILQ Uniprot:Q9P4U6
Length = 1065
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 41 APTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECS----KELHV 96
A + P +S+ H TK++ +++ + + PF+A V + K++
Sbjct: 879 ASVTKAPSNHSVASQHES-TKSNAE-IQDSQPRLVGLSQPFFA-PPVPQAKDNGLKKIRA 935
Query: 97 LAVDDSYVDRKLIERLLQISSC-KVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
L +D+ V+++++ R+L + VT V+ G A + + E+ V FD LI D
Sbjct: 936 LVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKANMEEGKV-FD-----LIFMD 989
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMS--SEDVLTQIDSCLEEGAEEYIVKPVK 210
MP + G E + I++ P+V +S SED + I C+ G + +I KP++
Sbjct: 990 IQMPNLDGIESTRLIRQMGC--SAPIVALSAFSED--SNIKDCMNSGMDMFISKPIR 1042
>UNIPROTKB|Q48GE0 [details] [associations]
symbol:fleR "Sigma-54 dependent DNA-binding response
regulator FleR" species:264730 "Pseudomonas syringae pv.
phaseolicola 1448A" [GO:0007155 "cell adhesion" evidence=ISS]
[GO:0030092 "regulation of flagellum assembly" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0035556
GO:GO:0003677 GO:GO:0007155 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0017111
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG2204 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 GO:GO:0030092
KO:K10943 RefSeq:YP_275543.1 ProteinModelPortal:Q48GE0
STRING:Q48GE0 GeneID:3555577 KEGG:psp:PSPPH_3385 PATRIC:19976178
OMA:FQMIIDT ProtClustDB:CLSK866333 Uniprot:Q48GE0
Length = 471
Score = 122 (48.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/115 (30%), Positives = 63/115 (54%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
++VL V+D DR L E L + +E Q +G E++ V +A +L+I
Sbjct: 3 INVLLVED---DRSLREALGE-------TLELAGYGYQAVG-SAEEALVAAEAQPFSLVI 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+D MPGM G++LL ++ S ++PV++M++ + + + +GA +Y+VKP
Sbjct: 52 SDVNMPGMDGHQLLSLLR--SRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLVKP 104
>UNIPROTKB|Q884Y0 [details] [associations]
symbol:fleR "Sigma-54 dependent transcriptional
regulator/response regulator FleR" species:223283 "Pseudomonas
syringae pv. tomato str. DC3000" [GO:0001539 "ciliary or flagellar
motility" evidence=ISS] [GO:0030092 "regulation of flagellum
assembly" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
GO:GO:0001539 GO:GO:0030092 KO:K10943 OMA:FQMIIDT
ProtClustDB:CLSK866333 RefSeq:NP_791779.1 HSSP:P41789
ProteinModelPortal:Q884Y0 GeneID:1183601 KEGG:pst:PSPTO_1956
PATRIC:19995186 BioCyc:PSYR223283:GJIX-1996-MONOMER Uniprot:Q884Y0
Length = 471
Score = 122 (48.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/115 (30%), Positives = 63/115 (54%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
++VL V+D DR L E L + +E Q +G E++ V +A +L+I
Sbjct: 3 INVLLVED---DRSLREALGE-------TLELAGYGYQAVG-SAEEALVAAEAQPFSLVI 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+D MPGM G++LL ++ S ++PV++M++ + + + +GA +Y+VKP
Sbjct: 52 SDVNMPGMDGHQLLSLLR--SRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLVKP 104
>TIGR_CMR|SPO_3037 [details] [associations]
symbol:SPO_3037 "DNA-binding response regulator, LysR
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000847 InterPro:IPR001789
Pfam:PF00072 Pfam:PF00126 PRINTS:PR00039 PROSITE:PS50110
PROSITE:PS50931 SMART:SM00448 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:YP_168241.1
ProteinModelPortal:Q5LP15 DNASU:3195987 GeneID:3195987
KEGG:sil:SPO3037 PATRIC:23379513 Uniprot:Q5LP15
Length = 269
Score = 118 (46.6 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 74 ETNRGFPFWAMATVAECSKEL-HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQY 132
E + G P AT +EL +L VDD+ + + LL+ + ++ SG AL +
Sbjct: 93 EVSNG-PLPESATQPGDDEELPSLLVVDDTPQNIHHLHGLLK-DAYRIIPQTSGKGALSF 150
Query: 133 LGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
L GE ++ LI+ D MP M GYE+ ++IK ++ ++PV+ ++S D
Sbjct: 151 LS--GELAD---------LILLDIRMPDMDGYEVCRQIKSTASLADIPVIFLTSLDDPMD 199
Query: 193 IDSCLEEGAEEYIVKPV 209
LE GA ++I +P+
Sbjct: 200 ETKGLEMGACDFITRPI 216
>TIGR_CMR|BA_5504 [details] [associations]
symbol:BA_5504 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_847664.1 RefSeq:YP_022171.1 RefSeq:YP_031352.1
ProteinModelPortal:Q81K35 DNASU:1085148
EnsemblBacteria:EBBACT00000010087 EnsemblBacteria:EBBACT00000018699
EnsemblBacteria:EBBACT00000023974 GeneID:1085148 GeneID:2819097
GeneID:2848975 KEGG:ban:BA_5504 KEGG:bar:GBAA_5504 KEGG:bat:BAS5113
OMA:NMARRVK ProtClustDB:CLSK899140
BioCyc:BANT260799:GJAJ-5188-MONOMER
BioCyc:BANT261594:GJ7F-5366-MONOMER Uniprot:Q81K35
Length = 223
Score = 116 (45.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDD R LI L++ +V G L E+ N G D L I
Sbjct: 1 MKILVVDDESSIRNLIRMQLEMEGYEVLTAADGREVL-------ERWNEGPDVL-----I 48
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +P GYELL+ +E R++PV++++++ + L+ GA++Y+ KP ++
Sbjct: 49 LDVMLPDTDGYELLRLFREKD--RDIPVLMLTAKSQMNDKLLGLQLGADDYVTKPFNYAE 106
>TIGR_CMR|GSU_2946 [details] [associations]
symbol:GSU_2946 "DNA-binding heavy metal response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR006291
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034815 KO:K07665 TIGRFAMs:TIGR01387
HSSP:Q9WYN0 RefSeq:NP_953988.1 ProteinModelPortal:Q748Q5
GeneID:2688389 KEGG:gsu:GSU2946 PATRIC:22028753 OMA:GYMLEIP
ProtClustDB:CLSK743174 BioCyc:GSUL243231:GH27-2897-MONOMER
Uniprot:Q748Q5
Length = 223
Score = 116 (45.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 150 NLIITDYTMPGMTGYELLKKI-KESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LII D +PG G+E+L+++ KE S EVPV+ +S+ D + LE GA++Y+VKP
Sbjct: 46 DLIILDIMLPGRDGWEVLEELRKEGS---EVPVIYLSARDAVHDRVRGLELGADDYLVKP 102
Query: 209 VKLSD 213
S+
Sbjct: 103 FAFSE 107
>DICTYBASE|DDB_G0277845 [details] [associations]
symbol:dhkB "histidine kinase B" species:44689
"Dictyostelium discoideum" [GO:0016020 "membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0000155
"phosphorelay sensor kinase activity" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0023014
"signal transduction by phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0277845
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0023014 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 HSSP:Q9WZV7
EMBL:AF024654 PIR:T08875 RefSeq:XP_642228.1
ProteinModelPortal:Q54YH4 EnsemblProtists:DDB0215358 GeneID:8621437
KEGG:ddi:DDB_G0277845 OMA:HWILMES Uniprot:Q54YH4
Length = 1969
Score = 127 (49.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 49/206 (23%), Positives = 92/206 (44%)
Query: 19 PYKSQKSCSTTLNSPPRPQCTGAPTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRG 78
P +K+ +TT S +P T + + + Q H+ T T K +K ++T
Sbjct: 1776 PQNIEKTTTTTTTSTTKPTATSSSSSSSKTTKTQQQQHHPTTTT---TTKSEKIEKT--- 1829
Query: 79 FPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE 138
A AT +E K +L V+D++V+ K+ +LL+ S +G A++ +
Sbjct: 1830 ----AAATTSE--KIEKILLVEDNFVNVKIFSKLLKDSGYIFDVAHNGVEAVECV----- 1878
Query: 139 QSNVGFDALKVNLIITDYTMPGMTGYEL---LKKIKESSVFREVP--------VVIMSSE 187
+D LI+ D MP M G+E ++++++S++ P +V +++
Sbjct: 1879 -KKGAYD-----LILMDCQMPEMDGFEATTAIRELEKSNLIESPPSKKHSHVVIVALTAN 1932
Query: 188 DVLTQIDSCLEEGAEEYIVKPVKLSD 213
CL G +++ KP+K SD
Sbjct: 1933 SGYKDKQKCLSVGMNDFLQKPIKTSD 1958
Score = 43 (20.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 2 NMKQYLQIFEPICVQF---KPYKSQKSCSTTLNSPPRPQ 37
++ QY I + CV F K +++ S T++ PQ
Sbjct: 1241 SISQYFAILKISCVDFENKKEFENYLSTLATVDQTTNPQ 1279
>TIGR_CMR|GSU_2574 [details] [associations]
symbol:GSU_2574 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 Pfam:PF01966
PROSITE:PS50110 SMART:SM00448 SMART:SM00471 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0008152 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081
Gene3D:1.10.3210.10 HOGENOM:HOG000266481 RefSeq:NP_953620.1
ProteinModelPortal:Q74A17 GeneID:2686365 KEGG:gsu:GSU2574
PATRIC:22028001 KO:K07814 OMA:HTRRISE ProtClustDB:CLSK746108
BioCyc:GSUL243231:GH27-2551-MONOMER Uniprot:Q74A17
Length = 368
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 34/116 (29%), Positives = 64/116 (55%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL VDD ++R+L+ +L + +TA ++G AL+ L N D LI+
Sbjct: 5 ISVLVVDDEEMNRELLSVMLDGLATPITA-QNGLEALRVL-----DKNSAID-----LIL 53
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMS-SEDVLTQIDSCLEEGAEEYIVKP 208
D MP + G+ L +K+ ++ ++PV++++ S+D +T+ L GA +++ KP
Sbjct: 54 LDLEMPELNGFATLATLKKHPLWCDIPVIVLTASKDEVTRT---LRLGANDFLAKP 106
>TIGR_CMR|SPO_0022 [details] [associations]
symbol:SPO_0022 "response regulator" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR001932 Pfam:PF00072 Pfam:PF07228 PROSITE:PS50110
SMART:SM00331 SMART:SM00448 GO:GO:0003824 GO:GO:0006355
GO:GO:0035556 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008152
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
SUPFAM:SSF81606 RefSeq:YP_165295.1 ProteinModelPortal:Q5LWH9
GeneID:3194721 KEGG:sil:SPO0022 PATRIC:23373275
HOGENOM:HOG000291805 OMA:ERKWGDL ProtClustDB:CLSK933114
Uniprot:Q5LWH9
Length = 445
Score = 120 (47.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 31/118 (26%), Positives = 64/118 (54%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS + R+++ L+ +V ESG A++ A+ +L+++D
Sbjct: 43 VLVVDDSRLQRRILSSSLKKWGFEVIEAESGEEAMEICAR----------AMP-DLVLSD 91
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+ MPGM+G + + ++ + R ++++S+ ++ L+ GA+++++KPV SD
Sbjct: 92 WVMPGMSGVDFCEAFRQLNSDRYCYFILLTSKSEKNEVAQGLDAGADDFLIKPVS-SD 148
>UNIPROTKB|Q9A5I5 [details] [associations]
symbol:pleD "Response regulator PleD" species:190650
"Caulobacter crescentus CB15" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0005525
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007049 SUPFAM:SSF55073 UniPathway:UPA00599 GO:GO:0052621
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 EMBL:AE005673
GenomeReviews:AE005673_GR KO:K02488 EMBL:L42554 PIR:E87554
RefSeq:NP_421265.1 ProteinModelPortal:Q9A5I5 SMR:Q9A5I5
DIP:DIP-29503N IntAct:Q9A5I5 GeneID:943650 KEGG:ccr:CC_2462
PATRIC:21301956 HOGENOM:HOG000167204 OMA:LAICERN
ProtClustDB:PRK09581 Uniprot:Q9A5I5
Length = 454
Score = 120 (47.3 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD + +L+E L +V+ G AL D ++I+ D
Sbjct: 5 ILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARD-----------LPDIILLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM G+ + +K+K+ R +PVV++++ D LE GA +++ KP+
Sbjct: 54 VMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 107
>TIGR_CMR|GSU_1927 [details] [associations]
symbol:GSU_1927 "sensory box/response regulator"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001054
InterPro:IPR001789 InterPro:IPR013655 Pfam:PF00072 Pfam:PF08447
PROSITE:PS50110 PROSITE:PS50113 SMART:SM00091 SMART:SM00448
InterPro:IPR001610 Pfam:PF00990 Pfam:PF00563 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SUPFAM:SSF55073 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0016849
GO:GO:0009190 InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254
PROSITE:PS50887 Gene3D:3.20.20.450 InterPro:IPR001633 SMART:SM00052
SUPFAM:SSF141868 PROSITE:PS50883 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 HOGENOM:HOG000136246
RefSeq:NP_952976.2 GeneID:2688352 KEGG:gsu:GSU1927 PATRIC:22026719
BioCyc:GSUL243231:GH27-2001-MONOMER Uniprot:Q74BV5
Length = 708
Score = 122 (48.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 122 AVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPV 181
AVE G A+ G DG + F L ++I+ D MPGM G+++ ++I+ V +
Sbjct: 29 AVEQGGFAVIEAG-DGVTAIEMFSRLVPDIILLDVVMPGMGGFDVCRRIRRLPGGDRVQI 87
Query: 182 VIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
++M+S D ID E GA +++ KP+
Sbjct: 88 LVMTSLDDTGAIDEAYEAGASDFLAKPI 115
>UNIPROTKB|Q48GB2 [details] [associations]
symbol:PSPPH_3413 "Chemotaxis protein CheV, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 InterPro:IPR002545
Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851
SMART:SM00260 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 EMBL:CP000058
GenomeReviews:CP000058_GR SUPFAM:SSF50341 eggNOG:COG0835
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:YP_275571.1 ProteinModelPortal:Q48GB2 STRING:Q48GB2
GeneID:3556331 KEGG:psp:PSPPH_3413 PATRIC:19976236 OMA:QVSRCLQ
ProtClustDB:CLSK2299194 Uniprot:Q48GB2
Length = 308
Score = 117 (46.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 85 ATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL-GLDGEQSNVG 143
A V + + VL VDDS V RK + R L+ +V A+ G +AL YL + E
Sbjct: 170 AEVQHKAVSMRVLTVDDSSVARKQVSRCLETVGVEVVALNDGRQALDYLLKMVAEGKKPE 229
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAE 202
+ L ++I+D MP M GY L I+ +++ + + +S V Q + GA+
Sbjct: 230 EEFL---MMISDIEMPEMDGYTLTAAIRNDPRMQKMHITLHTSLSGVFNQA-MVKKVGAD 285
Query: 203 EYIVK 207
+++ K
Sbjct: 286 DFLAK 290
>UNIPROTKB|Q9KS62 [details] [associations]
symbol:VC_1398 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:AGANFYL HSSP:P06143 PIR:F82205 RefSeq:NP_231041.1
ProteinModelPortal:Q9KS62 DNASU:2614030 GeneID:2614030
KEGG:vch:VC1398 PATRIC:20081860 ProtClustDB:CLSK794124
Uniprot:Q9KS62
Length = 124
Score = 98 (39.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+ VDD+ R + LL+ + +G AL+ L+ + V+L + D
Sbjct: 5 VMVVDDASTVRMYHKALLEEIGIFILEASNGVEALER-ALE----------MPVDLFLVD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP M G+ L+++I+ +P V++S+E + + GA Y+VKPV
Sbjct: 54 INMPKMDGFTLVREIRCRPELAGIPTVMISTESQESDRQQGIHMGANLYMVKPV 107
>TIGR_CMR|VC_1398 [details] [associations]
symbol:VC_1398 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:AGANFYL
HSSP:P06143 PIR:F82205 RefSeq:NP_231041.1 ProteinModelPortal:Q9KS62
DNASU:2614030 GeneID:2614030 KEGG:vch:VC1398 PATRIC:20081860
ProtClustDB:CLSK794124 Uniprot:Q9KS62
Length = 124
Score = 98 (39.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+ VDD+ R + LL+ + +G AL+ L+ + V+L + D
Sbjct: 5 VMVVDDASTVRMYHKALLEEIGIFILEASNGVEALER-ALE----------MPVDLFLVD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP M G+ L+++I+ +P V++S+E + + GA Y+VKPV
Sbjct: 54 INMPKMDGFTLVREIRCRPELAGIPTVMISTESQESDRQQGIHMGANLYMVKPV 107
>TIGR_CMR|GSU_2214 [details] [associations]
symbol:GSU_2214 "protein-glutamate methylesterase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006935
"chemotaxis" evidence=ISS] [GO:0008984 "protein-glutamate
methylesterase activity" evidence=ISS] HAMAP:MF_00099
InterPro:IPR000673 InterPro:IPR001789 InterPro:IPR008248
Pfam:PF00072 Pfam:PF01339 PIRSF:PIRSF000876 PROSITE:PS50110
PROSITE:PS50122 SMART:SM00448 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2201
HOGENOM:HOG000151424 KO:K03412 GO:GO:0008984 Gene3D:3.40.50.180
SUPFAM:SSF52738 RefSeq:NP_953263.1 ProteinModelPortal:P62640
GeneID:2687095 KEGG:gsu:GSU2214 PATRIC:22027283 OMA:SQHMPAG
ProtClustDB:CLSK828757 BioCyc:GSUL243231:GH27-2152-MONOMER
Uniprot:P62640
Length = 371
Score = 118 (46.6 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+++ V+ +DDS R+ I ++L+ S +V + T DGE+ LK +L
Sbjct: 2 RKIRVVVIDDSAYSRRAITKMLE-SMPEVEVIGYAT--------DGEEGIRKIIDLKPDL 52
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+ D MP M G+ LL+ + E S V+++SS ++ LE GA +++ KP K
Sbjct: 53 VTLDLEMPRMDGFTLLRIVMEYS---PTAVIVISSRSEDEKVFRALELGAVDFVAKPTK 108
>TIGR_CMR|CHY_1413 [details] [associations]
symbol:CHY_1413 "DNA-binding response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0745 HOGENOM:HOG000034819 RefSeq:YP_360245.1
ProteinModelPortal:Q3AC89 SMR:Q3AC89 STRING:Q3AC89 GeneID:3728069
KEGG:chy:CHY_1413 PATRIC:21275957 OMA:EHAWIAT
BioCyc:CHYD246194:GJCN-1412-MONOMER Uniprot:Q3AC89
Length = 228
Score = 114 (45.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 136 DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
DG+++ F K++LII D +P + G E+ K+I+++S+ VP++++++ +ID
Sbjct: 33 DGKEALKRFSEHKIDLIILDLMLPEIDGMEIAKEIRKTSL---VPIIMLTARG--EEIDK 87
Query: 196 CL--EEGAEEYIVKP 208
L E GA++Y+VKP
Sbjct: 88 ILGLEIGADDYVVKP 102
>UNIPROTKB|Q1DF43 [details] [associations]
symbol:MXAN_0460 "Response regulator" species:246197
"Myxococcus xanthus DK 1622" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:CP000113 GenomeReviews:CP000113_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
RefSeq:YP_628730.1 ProteinModelPortal:Q1DF43 IntAct:Q1DF43
STRING:Q1DF43 GeneID:4103270 KEGG:mxa:MXAN_0460 PATRIC:22643509
HOGENOM:HOG000025389 OMA:NLELEGH ProtClustDB:CLSK955207
BioCyc:MXAN246197:GIWU-455-MONOMER Uniprot:Q1DF43
Length = 255
Score = 115 (45.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R + L++ V +G AL+ L +QS V++++TD
Sbjct: 12 ILLVDDEESLRITLAANLELEGHTVLEAANGEEALRLLE---KQS--------VDVVLTD 60
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPG+ G ELL++IK+ ++PVV+M++ +D L EGA + KP
Sbjct: 61 IRMPGLHGVELLRRIKQERP--DMPVVLMTAFTAEELVDDALAEGAFTVLPKP 111
>UNIPROTKB|Q4K894 [details] [associations]
symbol:gacS "Sensor protein GacS" species:220664
"Pseudomonas protegens Pf-5" [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000076 GenomeReviews:CP000076_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
HOGENOM:HOG000272329 KO:K07678 InterPro:IPR019247 Pfam:PF09984
RefSeq:YP_261539.1 ProteinModelPortal:Q4K894 STRING:Q4K894
GeneID:3478570 KEGG:pfl:PFL_4451 PATRIC:19878334 OMA:HHIEIAT
ProtClustDB:CLSK866224 BioCyc:PFLU220664:GIX8-4486-MONOMER
Uniprot:Q4K894
Length = 917
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S+ VL VDD+ + LI+ LL+ KV AV++G Y L+ Q+ FD
Sbjct: 664 SRAPRVLCVDDNPANLLLIQTLLEDMGAKVLAVDNG-----YAALNAIQTEP-FD----- 712
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFRE---VPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
L++ D MPGM G + + I++ R +P+V +++ + + + L+ G ++Y+ K
Sbjct: 713 LVMMDVQMPGMDGRQSTEAIRQWESERHGTPLPIVALTAHAMANEKRALLQSGMDDYLTK 772
Query: 208 PV 209
P+
Sbjct: 773 PI 774
>TIGR_CMR|CPS_1474 [details] [associations]
symbol:CPS_1474 "chemotaxis protein CheV" species:167879
"Colwellia psychrerythraea 34H" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 eggNOG:COG0835
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:YP_268216.1 ProteinModelPortal:Q485P9 STRING:Q485P9
GeneID:3523307 KEGG:cps:CPS_1474 PATRIC:21466155 OMA:AWEELSR
BioCyc:CPSY167879:GI48-1555-MONOMER Uniprot:Q485P9
Length = 309
Score = 116 (45.9 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRAL-QYLGLDGEQSNVGFDALKVNLIIT 154
V+ DDS V R + R L+ + ++G AL Q L ++ N + KV L+I+
Sbjct: 181 VMIADDSTVARNQVRRALEPLGINMVLAKNGRDALEQLLAIEATCENCITE--KVALMIS 238
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE-GAEEYIVK 207
D MP M GY L ++K + ++P+++ +S + ++ +E+ GAE++I K
Sbjct: 239 DIEMPEMDGYTLTAEVKGNDRMSKMPIILHTSLSGVFN-NAMVEKVGAEDFIPK 291
>UNIPROTKB|P06628 [details] [associations]
symbol:spo0F "Sporulation initiation phosphotransferase F"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0005737
GO:GO:0006355 GO:GO:0035556 GO:GO:0046872 GO:GO:0030435
GO:GO:0016301 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:Z49782 EMBL:X03497 EMBL:M11081
EMBL:M22039 PIR:A24737 RefSeq:NP_391594.1 PDB:1F51 PDB:1FSP
PDB:1NAT PDB:1PEY PDB:1PUX PDB:1SRR PDB:2FSP PDB:2FTK PDB:2JVI
PDB:2JVJ PDB:2JVK PDB:3Q15 PDBsum:1F51 PDBsum:1FSP PDBsum:1NAT
PDBsum:1PEY PDBsum:1PUX PDBsum:1SRR PDBsum:2FSP PDBsum:2FTK
PDBsum:2JVI PDBsum:2JVJ PDBsum:2JVK PDBsum:3Q15
ProteinModelPortal:P06628 SMR:P06628 DIP:DIP-58965N IntAct:P06628
EnsemblBacteria:EBBACT00000000330 GeneID:937041 KEGG:bsu:BSU37130
PATRIC:18979462 GenoList:BSU37130 KO:K02490 OMA:IRVIIMT
ProtClustDB:CLSK873695 BioCyc:BSUB:BSU37130-MONOMER
BindingDB:P06628 ChEMBL:CHEMBL3857 EvolutionaryTrace:P06628
Uniprot:P06628
Length = 124
Score = 97 (39.2 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 30/118 (25%), Positives = 54/118 (45%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD Y R L+ + + +G +AL + + + +L++ D
Sbjct: 6 ILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKE-----------RPDLVLLD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+PGM G E+LK++K + + V+IM++ L I E GA + KP + +
Sbjct: 55 MKIPGMDGIEILKRMKV--IDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDE 110
>TIGR_CMR|BA_0571 [details] [associations]
symbol:BA_0571 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF46894
HOGENOM:HOG000034815 HSSP:P08402 RefSeq:NP_843105.1
RefSeq:YP_017194.1 RefSeq:YP_026818.1 ProteinModelPortal:Q81YR2
DNASU:1087909 EnsemblBacteria:EBBACT00000010289
EnsemblBacteria:EBBACT00000017976 EnsemblBacteria:EBBACT00000019549
GeneID:1087909 GeneID:2816056 GeneID:2852340 KEGG:ban:BA_0571
KEGG:bar:GBAA_0571 KEGG:bat:BAS0540 OMA:TQQTIRY
ProtClustDB:CLSK915864 BioCyc:BANT260799:GJAJ-600-MONOMER
BioCyc:BANT261594:GJ7F-626-MONOMER Uniprot:Q81YR2
Length = 223
Score = 113 (44.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 35/115 (30%), Positives = 61/115 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L V+D+ L+E ++QI C V++ GL N+ +DA I+
Sbjct: 1 MRLLVVEDN---ASLLESIVQIL-CDEFEVDTALNGED--GLFLALQNI-YDA-----IL 48
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M G+E+++KI++ + E PV+ +++ D L L+ G ++YIVKP
Sbjct: 49 LDVMMPEMDGFEVIQKIRDEKI--ETPVLFLTARDSLEDRVKGLDFGGDDYIVKP 101
>TIGR_CMR|CHY_1125 [details] [associations]
symbol:CHY_1125 "response regulator" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR005471 Pfam:PF00072 Pfam:PF09339
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
RefSeq:YP_359971.1 ProteinModelPortal:Q3AD13 STRING:Q3AD13
GeneID:3727659 KEGG:chy:CHY_1125 PATRIC:21275390
HOGENOM:HOG000131195 OMA:RNEYLWI ProtClustDB:CLSK289825
BioCyc:CHYD246194:GJCN-1124-MONOMER Uniprot:Q3AD13
Length = 205
Score = 112 (44.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 28/120 (23%), Positives = 61/120 (50%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL +DD R + ++ + E+G +G++ F K ++++
Sbjct: 1 MRVLIIDDDEGIRYTVGEIIAFMGWEAIKAENGA-----IGIEK------FVREKPDMVL 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP + G + +++I+E + + VP+++++ ++ D LE GA ++ +KP+K D
Sbjct: 50 VDYHMPALDGLDTVERIRE--IDQGVPIIVLTVDERQQIADKFLEVGASDFALKPIKAPD 107
>UNIPROTKB|P0AFB8 [details] [associations]
symbol:glnG "NtrC transcriptional dual regulator"
species:83333 "Escherichia coli K-12" [GO:0050906 "detection of
stimulus involved in sensory perception" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0009399 "nitrogen fixation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000160 "phosphorelay signal transduction system" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 InterPro:IPR010114
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0009399 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:L19201 eggNOG:COG2204 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 EMBL:X05173
EMBL:D16509 PIR:B30377 RefSeq:NP_418304.1 RefSeq:YP_491582.1
ProteinModelPortal:P0AFB8 SMR:P0AFB8 IntAct:P0AFB8
EnsemblBacteria:EBESCT00000001207 EnsemblBacteria:EBESCT00000001208
EnsemblBacteria:EBESCT00000001209 EnsemblBacteria:EBESCT00000015316
GeneID:12933634 GeneID:948361 KEGG:ecj:Y75_p3318 KEGG:eco:b3868
PATRIC:32123239 EchoBASE:EB0380 EcoGene:EG10385 KO:K07712
OMA:ARGQSNL ProtClustDB:PRK10923 BioCyc:EcoCyc:PROTEIN-NRI
BioCyc:ECOL316407:JW3839-MONOMER BindingDB:P0AFB8 ChEMBL:CHEMBL3552
Genevestigator:P0AFB8 GO:GO:0050906 TIGRFAMs:TIGR01818
Uniprot:P0AFB8
Length = 469
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V VDD R ++ER L + T E+G L+ L + +++++D
Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA-----------SKTPDVLLSD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MPGM G LLK+IK+ +PV+IM++ L S ++GA +Y+ KP + +
Sbjct: 55 IRMPGMDGLALLKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDE 110
>TIGR_CMR|SO_1228 [details] [associations]
symbol:SO_1228 "torcad operon transcriptional regulatory
protein TorR" species:211586 "Shewanella oneidensis MR-1"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402 KO:K07772
ProtClustDB:PRK10766 RefSeq:NP_716851.1 ProteinModelPortal:Q8EHJ3
SMR:Q8EHJ3 GeneID:1169054 KEGG:son:SO_1228 PATRIC:23522112
OMA:QHIDLVM Uniprot:Q8EHJ3
Length = 236
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V R ++ + + G R ++ DGEQ F+ ++LI+ D
Sbjct: 5 VLVVDDEVVIRARLKGYFE---------KEGYRVVE--AADGEQMWYEFNRQHIDLIMLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC--LEEGAEEYIVKPVKLSD 213
+PG+ G L ++++ S V ++++S D ID LE GA++Y+ KP +L +
Sbjct: 54 INLPGVDGLSLTRELRSRS---HVGIILVSGRD--ESIDKIVGLEMGADDYVTKPFELRE 108
>TIGR_CMR|GSU_1003 [details] [associations]
symbol:GSU_1003 "nitrogen regulation protein NR(I)"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006808 "regulation of nitrogen utilization" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 KO:K07712
HSSP:P06143 RefSeq:NP_952057.1 ProteinModelPortal:Q74EF9
GeneID:2687478 KEGG:gsu:GSU1003 PATRIC:22024778 OMA:NQVRAAD
ProtClustDB:CLSK828129 BioCyc:GSUL243231:GH27-989-MONOMER
Uniprot:Q74EF9
Length = 481
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD R ++ + L+ V G AL+ + QSN + +L I D
Sbjct: 6 ILVADDEESMRWVLSKALRKKGFTVDLARDGEEALRLI-----QSN------EYDLAILD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG TG ELL K++E ++ +VIM++E + ++ GA +YI KP L
Sbjct: 55 IKMPGFTGLELLDKVRELK--HDLLMVIMTAEASMKNAVEAMKRGAYDYITKPFDL 108
>UNIPROTKB|Q52884 [details] [associations]
symbol:cheY2 "CheY2" species:382 "Sinorhizobium meliloti"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:U13166
GenomeReviews:AL591688_GR PIR:S61838 PDB:1P6Q PDB:1P6U PDBsum:1P6Q
PDBsum:1P6U ProteinModelPortal:Q52884 SMR:Q52884 IntAct:Q52884
PATRIC:23630501 ProtClustDB:CLSK800134 EvolutionaryTrace:Q52884
Uniprot:Q52884
Length = 129
Score = 96 (38.9 bits), Expect = 0.00012, P = 0.00012
Identities = 26/119 (21%), Positives = 57/119 (47%)
Query: 91 SKELHVLAVDDSYVDRKLI-ERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
++++ VL VDD R L+ + L Q+ ++TA G + ++ + +
Sbjct: 4 AEKIKVLIVDDQVTSRLLLGDALQQLGFKQITAAGDGEQGMKIMAQNPH----------- 52
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+L+I+D+ MP M G LL+ ++ + ++ +I++++ + GA + KP
Sbjct: 53 HLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKP 111
>UNIPROTKB|G3LTY8 [details] [associations]
symbol:phoB "Two-component regulator protein" species:636
"Edwardsiella tarda" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006817 TIGRFAMs:TIGR02154
EMBL:JN543949 Uniprot:G3LTY8
Length = 229
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 31/115 (26%), Positives = 61/115 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L V+D R ++ +L+ ++G + L+ DG S + + +LI+
Sbjct: 3 IRILVVEDETPIRDMVSFVLE---------QNGYQPLEAESYDGALSQL-CEPYP-DLIL 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D+ +PG +G +L+K++K RE+PV+++++ LE GA++YI KP
Sbjct: 52 LDWMLPGGSGIQLIKQLKREPATREIPVMMLTARGEEEDRVRGLEVGADDYITKP 106
>UNIPROTKB|P0AEV1 [details] [associations]
symbol:rssB "regulator of RpoS" species:83333 "Escherichia
coli K-12" [GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0006508
"proteolysis" evidence=EXP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006508 GO:GO:0006351
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:X66003 EMBL:M64675 PIR:A36871
RefSeq:NP_415751.1 RefSeq:YP_489503.1 PDB:3EOD PDBsum:3EOD
ProteinModelPortal:P0AEV1 SMR:P0AEV1 IntAct:P0AEV1 PRIDE:P0AEV1
EnsemblBacteria:EBESCT00000002730 EnsemblBacteria:EBESCT00000002731
EnsemblBacteria:EBESCT00000016710 GeneID:12932932 GeneID:945855
KEGG:ecj:Y75_p1208 KEGG:eco:b1235 PATRIC:32117726 EchoBASE:EB2042
EcoGene:EG12121 HOGENOM:HOG000119811 KO:K02485 OMA:MICDLAM
ProtClustDB:PRK10693 BioCyc:EcoCyc:EG12121-MONOMER
BioCyc:ECOL316407:JW1223-MONOMER EvolutionaryTrace:P0AEV1
Genevestigator:P0AEV1 Uniprot:P0AEV1
Length = 337
Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L V+D V R L++ G AL+ LG GF +L+I D
Sbjct: 10 ILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLG--------GFTP---DLMICD 58
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M G +LL+ I+ + PV+++S+ + + I L G E+ ++KPVK
Sbjct: 59 IAMPRMNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>UNIPROTKB|Q7D1A5 [details] [associations]
symbol:cheY "Chemotaxis receiver protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0006928 "cellular component
movement" evidence=IGC] [GO:0052143 "chemotaxis on or near host
involved in symbiotic interaction" evidence=IGC] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0006928 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:AE007869 GenomeReviews:AE007869_GR
GO:GO:0052143 KO:K03413 ProtClustDB:CLSK800134 HSSP:P06143
RefSeq:NP_353549.1 ProteinModelPortal:Q7D1A5 SMR:Q7D1A5
STRING:Q7D1A5 GeneID:1132558 KEGG:atu:Atu0520 PATRIC:20810743
OMA:FKQITAA Uniprot:Q7D1A5
Length = 129
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 27/119 (22%), Positives = 57/119 (47%)
Query: 91 SKELHVLAVDDSYVDRKLI-ERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
++++ VL VDD R L+ + L Q+ ++T+ G + L+ + EQ
Sbjct: 4 AEKIKVLIVDDQVTSRLLLSDALTQLGFKQITSAGDGEQGLKIM----EQQ-------PH 52
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+L+I+D+ MP M G L ++ + ++ +I++++ + + GA + KP
Sbjct: 53 HLVISDFNMPKMDGLGFLHAVRANPTTKKAAFIILTAQGDRALVQKAAQLGANNVLAKP 111
>NCBI_NP|NP_353549.1 [details] [associations]
symbol:cheY "chemotaxisreceiverprotein" species:176299
"Agrobacterium fabrum str. C58" [GO:0052143 "chemotaxis on or near
host involved in symbiotic interaction" evidence=IGC] [GO:0006928
"cellular component movement" evidence=IGC] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS]
REFSEQ:NC_003062 Ncbi:NP_353549
Length = 129
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 27/119 (22%), Positives = 57/119 (47%)
Query: 91 SKELHVLAVDDSYVDRKLI-ERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
++++ VL VDD R L+ + L Q+ ++T+ G + L+ + EQ
Sbjct: 4 AEKIKVLIVDDQVTSRLLLSDALTQLGFKQITSAGDGEQGLKIM----EQQ-------PH 52
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+L+I+D+ MP M G L ++ + ++ +I++++ + + GA + KP
Sbjct: 53 HLVISDFNMPKMDGLGFLHAVRANPTTKKAAFIILTAQGDRALVQKAAQLGANNVLAKP 111
>UNIPROTKB|Q9KQ05 [details] [associations]
symbol:VC_2202 "Chemotaxis protein CheV" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072
Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341
KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867 OMA:QVSRCLQ
HSSP:P06143 PIR:A82107 RefSeq:NP_231833.1 ProteinModelPortal:Q9KQ05
DNASU:2613242 GeneID:2613242 KEGG:vch:VC2202 PATRIC:20083447
ProtClustDB:CLSK2300370 Uniprot:Q9KQ05
Length = 308
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 89 ECSKEL--HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
E KE +L DDS V RK ++R ++ +V + G A + L L E + G +
Sbjct: 175 EQEKEFVRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKL-L--EMLSEGPIS 231
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEE-GAEEY 204
+++L+I+D MP M GY L +I+ + +++ V++ SS V Q + +E GA +
Sbjct: 232 NQISLVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQ--AMVERVGANAF 289
Query: 205 IVK 207
I K
Sbjct: 290 IAK 292
>TIGR_CMR|VC_2202 [details] [associations]
symbol:VC_2202 "chemotaxis protein CheV" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 KO:K03415
InterPro:IPR024181 PIRSF:PIRSF002867 OMA:QVSRCLQ HSSP:P06143
PIR:A82107 RefSeq:NP_231833.1 ProteinModelPortal:Q9KQ05
DNASU:2613242 GeneID:2613242 KEGG:vch:VC2202 PATRIC:20083447
ProtClustDB:CLSK2300370 Uniprot:Q9KQ05
Length = 308
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 89 ECSKEL--HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
E KE +L DDS V RK ++R ++ +V + G A + L L E + G +
Sbjct: 175 EQEKEFVRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKL-L--EMLSEGPIS 231
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEE-GAEEY 204
+++L+I+D MP M GY L +I+ + +++ V++ SS V Q + +E GA +
Sbjct: 232 NQISLVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQ--AMVERVGANAF 289
Query: 205 IVK 207
I K
Sbjct: 290 IAK 292
>TIGR_CMR|SO_4003 [details] [associations]
symbol:SO_4003 "response regulator" species:211586
"Shewanella oneidensis MR-1" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 SMART:SM00471 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0008152 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0008081 Gene3D:1.10.3210.10 HSSP:Q9A5I4
HOGENOM:HOG000266481 KO:K07814 RefSeq:NP_719533.1
ProteinModelPortal:Q8EAA5 GeneID:1171631 KEGG:son:SO_4003
PATRIC:23527676 OMA:FVTAKTD ProtClustDB:CLSK577304 Uniprot:Q8EAA5
Length = 357
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS + +++ LL + A SG +AL ++ +LI+ D
Sbjct: 10 VLVVDDSADNIQILHGLLS-DKYSIRAATSGAKALALAAIEPMP----------DLILLD 58
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M G++ ++K + + R +P++ ++++ + + E GA +YI KPVK
Sbjct: 59 VMMPEMDGFQTCIRLKHNPLTRHIPIIFVTAKTDIVDERTGFELGAVDYISKPVK 113
>UNIPROTKB|P76340 [details] [associations]
symbol:yedW "predicted DNA-binding response regulator in
two-component system with YedV" species:83333 "Escherichia coli
K-12" [GO:0005622 "intracellular" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA;ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR006291 InterPro:IPR016032
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
SUPFAM:SSF46894 HOGENOM:HOG000034815 TIGRFAMs:TIGR01387 KO:K02483
PIR:E64961 RefSeq:NP_416478.2 RefSeq:YP_490219.1
ProteinModelPortal:P76340 SMR:P76340 DIP:DIP-11853N IntAct:P76340
MINT:MINT-1223015 PRIDE:P76340 EnsemblBacteria:EBESCT00000004539
EnsemblBacteria:EBESCT00000015627 GeneID:12931392 GeneID:946486
KEGG:ecj:Y75_p1936 KEGG:eco:b1969 PATRIC:32119269 EchoBASE:EB3798
EcoGene:EG14045 OMA:MTYDLWH ProtClustDB:PRK11517
BioCyc:EcoCyc:G7057-MONOMER BioCyc:ECOL316407:JW5322-MONOMER
Genevestigator:P76340 Uniprot:P76340
Length = 223
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 30/120 (25%), Positives = 62/120 (51%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L ++D+ ++ + + L + + AV G L YL L + + LII
Sbjct: 1 MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGL-YLALKDDYA----------LII 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +PGM G+++L+ ++ + ++ PV+ +++ D + L+ GA +Y+VKP S+
Sbjct: 50 LDIMLPGMDGWQILQTLRTA---KQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSE 106
>UNIPROTKB|Q11156 [details] [associations]
symbol:regX3 "Sensory transduction protein regX3"
species:1773 "Mycobacterium tuberculosis" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IDA] [GO:0019217 "regulation of fatty acid metabolic
process" evidence=IDA] [GO:0019220 "regulation of phosphate
metabolic process" evidence=IDA] [GO:0080134 "regulation of
response to stress" evidence=IDA] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0009405
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0019217 GO:GO:0006351
EMBL:BX842573 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819 SUPFAM:SSF46894
GO:GO:0080134 GO:GO:0019220 EMBL:Y13628 PIR:F70744
RefSeq:NP_215005.1 RefSeq:NP_334919.1 RefSeq:YP_006513821.1
PDB:2OQR PDBsum:2OQR ProteinModelPortal:Q11156 SMR:Q11156
PRIDE:Q11156 EnsemblBacteria:EBMYCT00000001447
EnsemblBacteria:EBMYCT00000072066 GeneID:13318362 GeneID:887195
GeneID:923874 KEGG:mtc:MT0510 KEGG:mtu:Rv0491 KEGG:mtv:RVBD_0491
PATRIC:18122830 TubercuList:Rv0491 KO:K07776 OMA:DVDSHTV
ProtClustDB:CLSK790554 EvolutionaryTrace:Q11156 Uniprot:Q11156
Length = 227
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 136 DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
DG + FD ++++ D +PGM+G ++ K+++ S VPV+++++ D ++ID
Sbjct: 33 DGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARS---SVPVIMVTARD--SEIDK 87
Query: 196 C--LEEGAEEYIVKP 208
LE GA++Y+ KP
Sbjct: 88 VVGLELGADDYVTKP 102
>UNIPROTKB|P0A5Z4 [details] [associations]
symbol:mtrA "DNA-binding response regulator MtrA"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IDA] [GO:0044117 "growth of symbiont in host"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0005886 GO:GO:0045893 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0006468 GO:GO:0044117 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622 EMBL:BX842582
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 EMBL:U01971 PIR:H70592 RefSeq:NP_217763.1
RefSeq:NP_337872.1 RefSeq:YP_006516722.1 PDB:2GWR PDB:3NHZ
PDBsum:2GWR PDBsum:3NHZ ProteinModelPortal:P0A5Z4 SMR:P0A5Z4
EnsemblBacteria:EBMYCT00000000173 EnsemblBacteria:EBMYCT00000070796
GeneID:13318068 GeneID:888743 GeneID:923067 KEGG:mtc:MT3344
KEGG:mtu:Rv3246c KEGG:mtv:RVBD_3246c PATRIC:18129108
TubercuList:Rv3246c KO:K07670 OMA:GFEPSFV ProtClustDB:CLSK872159
EvolutionaryTrace:P0A5Z4 Uniprot:P0A5Z4
Length = 228
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 136 DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
DG Q+ L+ +L++ D +PGM G ++ + ++ S VP+V+++++ +
Sbjct: 37 DGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADS---GVPIVMLTAKTDTVDVVL 93
Query: 196 CLEEGAEEYIVKPVK 210
LE GA++YI+KP K
Sbjct: 94 GLESGADDYIMKPFK 108
>TIGR_CMR|GSU_1891 [details] [associations]
symbol:GSU_1891 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 Pfam:PF01966
PROSITE:PS50110 SMART:SM00448 SMART:SM00471 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0008152 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081
Gene3D:1.10.3210.10 HOGENOM:HOG000266481 HSSP:P06143
RefSeq:NP_952940.1 ProteinModelPortal:Q74BY7 GeneID:2688472
KEGG:gsu:GSU1891 PATRIC:22026647 OMA:FATIRTH ProtClustDB:CLSK924546
BioCyc:GSUL243231:GH27-1919-MONOMER Uniprot:Q74BY7
Length = 379
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 22/60 (36%), Positives = 42/60 (70%)
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++++ITD MP MTG E+L+ I++S+ +VPV++M+ L+ +++GA ++I+KP
Sbjct: 51 IDIVITDINMPEMTGIEVLRAIRKSNP--DVPVILMTGYAELSVAVEAIKQGAFDFIIKP 108
>UNIPROTKB|P0AFJ5 [details] [associations]
symbol:phoB "PhoB transcriptional dual regulator"
species:83333 "Escherichia coli K-12" [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0001108
"bacterial-type RNA polymerase holo enzyme binding" evidence=IMP]
[GO:2000142 "regulation of DNA-dependent transcription, initiation"
evidence=IDA] [GO:0006817 "phosphate ion transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0005737 GO:GO:0035556 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 EMBL:U73857
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006817
eggNOG:COG0745 HOGENOM:HOG000034819 GO:GO:0001108 EMBL:X04026
PIR:A24256 RefSeq:NP_414933.1 RefSeq:YP_488691.1 PDB:1B00 PDB:1GXP
PDB:1GXQ PDB:1QQI PDB:1ZES PDB:2IYN PDB:2JB9 PDB:2JBA PDB:2Z33
PDB:3T72 PDBsum:1B00 PDBsum:1GXP PDBsum:1GXQ PDBsum:1QQI
PDBsum:1ZES PDBsum:2IYN PDBsum:2JB9 PDBsum:2JBA PDBsum:2Z33
PDBsum:3T72 ProteinModelPortal:P0AFJ5 SMR:P0AFJ5 DIP:DIP-35852N
IntAct:P0AFJ5 MINT:MINT-1313174 EnsemblBacteria:EBESCT00000002796
EnsemblBacteria:EBESCT00000016242 GeneID:12930822 GeneID:945046
KEGG:ecj:Y75_p0387 KEGG:eco:b0399 PATRIC:32115943 EchoBASE:EB0721
EcoGene:EG10728 KO:K07657 OMA:QVLEMGP ProtClustDB:PRK10161
BioCyc:EcoCyc:PHOB-MONOMER BioCyc:ECOL316407:JW0389-MONOMER
EvolutionaryTrace:P0AFJ5 Genevestigator:P0AFJ5 GO:GO:2000142
TIGRFAMs:TIGR02154 Uniprot:P0AFJ5
Length = 229
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LI+ D+ +PG +G + +K +K S+ R++PVV++++ LE GA++YI KP
Sbjct: 48 DLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKP 106
>TIGR_CMR|DET_0135 [details] [associations]
symbol:DET_0135 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819 KO:K02483
RefSeq:YP_180885.1 ProteinModelPortal:Q3ZA64 STRING:Q3ZA64
GeneID:3230499 KEGG:det:DET0135 PATRIC:21607359 OMA:CYNLAKE
ProtClustDB:CLSK837603 BioCyc:DETH243164:GJNF-135-MONOMER
Uniprot:Q3ZA64
Length = 230
Score = 111 (44.1 bits), Expect = 0.00019, P = 0.00019
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E +L V+D R+L+ L ++ E G +AL G+ + K +L+
Sbjct: 3 EHKILVVEDDATLRELLCYNLAKEGYQLECAEDGLKAL---GM--------YRRFKPSLV 51
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
I D +PGM G+EL + I+ S VP++++++ T + LE GA++Y+ KP +
Sbjct: 52 ILDVMLPGMDGFELCRLIRAES---SVPILMLTARSSETDKVNGLEVGADDYLSKPFGMK 108
Query: 213 D 213
+
Sbjct: 109 E 109
>TIGR_CMR|SO_4002 [details] [associations]
symbol:SO_4002 "sensory transduction histidine kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001638 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497
Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50894 SMART:SM00062 SMART:SM00073
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005215 GO:GO:0030288
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 InterPro:IPR025997 Pfam:PF13407
HSSP:Q9A5I4 RefSeq:NP_719532.2 ProteinModelPortal:Q8EAA6
GeneID:1171630 KEGG:son:SO_4002 PATRIC:23527674
HOGENOM:HOG000286637 ProtClustDB:CLSK577303 Uniprot:Q8EAA6
Length = 1702
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 46/172 (26%), Positives = 80/172 (46%)
Query: 51 SLTQTH-NILTKTHQRLVK---EKKFKETNRG-FPFW------AMATVAECSKELHVLAV 99
SL H I+ K H L++ E NR PF ++ T+ + +L V
Sbjct: 1296 SLVDKHPQIIAKQHPILLRTLGESLLLLLNRDRAPFGQHLEHQSITTLKNQLAGVELLLV 1355
Query: 100 DDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMP 159
+D+Y++++L LL+ + +VT + G AL L +QS FD ++ D MP
Sbjct: 1356 EDNYLNQELAVELLRQAGARVTVAQHGQEALTLLA---QQS---FDC-----VLMDGQMP 1404
Query: 160 GMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
M GYE + I+ F ++P++ M++ + + + L G I KP ++
Sbjct: 1405 VMDGYEATRLIRAQPQFADLPIIAMTANAMDSDRERALAAGMNAQINKPFQV 1456
>CGD|CAL0003344 [details] [associations]
symbol:SLN1 species:5476 "Candida albicans" [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=IGI]
[GO:0004673 "protein histidine kinase activity" evidence=ISS;IDA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0006469
"negative regulation of protein kinase activity" evidence=IEA]
[GO:0005034 "osmosensor activity" evidence=IEA] [GO:0009927
"histidine phosphotransfer kinase activity" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 CGD:CAL0003344 GO:GO:0016021
GO:GO:0005524 GO:GO:0036180 GO:GO:1900445 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673 EMBL:AACQ01000049
EMBL:AACQ01000048 GO:GO:0007234 GO:GO:0097308 KO:K11231
RefSeq:XP_717880.1 RefSeq:XP_717946.1 ProteinModelPortal:Q5A872
SMR:Q5A872 STRING:Q5A872 GeneID:3640422 GeneID:3640485
KEGG:cal:CaO19.10766 KEGG:cal:CaO19.3256 Uniprot:Q5A872
Length = 1373
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 32/125 (25%), Positives = 65/125 (52%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGF 144
TV + L VL +D+ V++++I R+L Q +T +G +A+ ++ + ++N F
Sbjct: 1236 TVLDDISHLRVLVAEDNSVNQEVISRMLKQEGITNLTMACNGAKAIDFVK-ESIENNENF 1294
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D LI D MP + G + K I+++ + + P++ +++ + + CL G +
Sbjct: 1295 D-----LIFMDVQMPEVDGLKATKMIRKNLQYNK-PIIALTAFADESNVKECLNSGMSGF 1348
Query: 205 IVKPV 209
I KP+
Sbjct: 1349 ITKPI 1353
>UNIPROTKB|Q5A872 [details] [associations]
symbol:SLN1 "Potential response regulator protein"
species:237561 "Candida albicans SC5314" [GO:0004673 "protein
histidine kinase activity" evidence=ISS;IDA] [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=IGI]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 CGD:CAL0003344 GO:GO:0016021
GO:GO:0005524 GO:GO:0036180 GO:GO:1900445 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673 EMBL:AACQ01000049
EMBL:AACQ01000048 GO:GO:0007234 GO:GO:0097308 KO:K11231
RefSeq:XP_717880.1 RefSeq:XP_717946.1 ProteinModelPortal:Q5A872
SMR:Q5A872 STRING:Q5A872 GeneID:3640422 GeneID:3640485
KEGG:cal:CaO19.10766 KEGG:cal:CaO19.3256 Uniprot:Q5A872
Length = 1373
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 32/125 (25%), Positives = 65/125 (52%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGF 144
TV + L VL +D+ V++++I R+L Q +T +G +A+ ++ + ++N F
Sbjct: 1236 TVLDDISHLRVLVAEDNSVNQEVISRMLKQEGITNLTMACNGAKAIDFVK-ESIENNENF 1294
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D LI D MP + G + K I+++ + + P++ +++ + + CL G +
Sbjct: 1295 D-----LIFMDVQMPEVDGLKATKMIRKNLQYNK-PIIALTAFADESNVKECLNSGMSGF 1348
Query: 205 IVKPV 209
I KP+
Sbjct: 1349 ITKPI 1353
>TIGR_CMR|GSU_1879 [details] [associations]
symbol:GSU_1879 "DNA-binding response regulator"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_952928.1 ProteinModelPortal:Q74BZ8 GeneID:2688525
KEGG:gsu:GSU1879 PATRIC:22026623 OMA:SHVESGE ProtClustDB:CLSK828616
BioCyc:GSUL243231:GH27-1891-MONOMER Uniprot:Q74BZ8
Length = 238
Score = 111 (44.1 bits), Expect = 0.00021, P = 0.00021
Identities = 34/121 (28%), Positives = 66/121 (54%)
Query: 95 HVLAVDDS-YVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
H+L V+D ++ R + L ++ +V+ VESG AL+ L D + LII
Sbjct: 7 HILLVEDEIHLARGICFNL-EMEGYRVSHVESGEAALERLTYD-----------RFALII 54
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQIDSCLEEGAEEYIVKPVKLS 212
D +PG+ G+ + ++++ + VP++I+++ D +I L+ GA++Y+ KP L+
Sbjct: 55 LDVMLPGIDGFTVCERVRATDA--RVPILILTARADDGDRITG-LDRGADDYLTKPFNLN 111
Query: 213 D 213
+
Sbjct: 112 E 112
>UNIPROTKB|O53894 [details] [associations]
symbol:mprA "Response regulator MprA" species:1773
"Mycobacterium tuberculosis" [GO:0000160 "phosphorelay signal
transduction system" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006950 "response
to stress" evidence=IEP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0090034 "regulation of chaperone-mediated protein complex
assembly" evidence=IDA] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0005886 GO:GO:0005737 GO:GO:0005618
GO:GO:0045892 GO:GO:0045893 GO:GO:0009405 GO:GO:0006950
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000160 eggNOG:COG0745
HOGENOM:HOG000034815 GO:GO:0090034 PIR:A70821 RefSeq:NP_215496.1
RefSeq:NP_335443.1 RefSeq:YP_006514341.1 HSSP:P0A5Z6
ProteinModelPortal:O53894 SMR:O53894 PRIDE:O53894
EnsemblBacteria:EBMYCT00000001458 EnsemblBacteria:EBMYCT00000070763
GeneID:13319541 GeneID:885038 GeneID:925187 KEGG:mtc:MT1009
KEGG:mtu:Rv0981 KEGG:mtv:RVBD_0981 PATRIC:18123964
TubercuList:Rv0981 KO:K07669 OMA:MLMANPR ProtClustDB:CLSK790869
Uniprot:O53894
Length = 230
Score = 110 (43.8 bits), Expect = 0.00025, P = 0.00025
Identities = 29/120 (24%), Positives = 60/120 (50%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDD R+ + R L + V G AL + D DAL +
Sbjct: 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRP------DAL-----V 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP + G E+ ++++ + ++P++++++ D +++ + L+ GA++Y+ KP L +
Sbjct: 52 LDVMMPRLDGLEVCRQLRGTG--DDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEE 109
>TIGR_CMR|CHY_2567 [details] [associations]
symbol:CHY_2567 "DNA-binding response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0745 HOGENOM:HOG000034819 KO:K02483 RefSeq:YP_361360.1
ProteinModelPortal:Q3A924 SMR:Q3A924 STRING:Q3A924 GeneID:3728531
KEGG:chy:CHY_2567 PATRIC:21278183
BioCyc:CHYD246194:GJCN-2566-MONOMER Uniprot:Q3A924
Length = 236
Score = 110 (43.8 bits), Expect = 0.00026, P = 0.00026
Identities = 23/80 (28%), Positives = 51/80 (63%)
Query: 136 DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
+G ++ F K +LI+ D+ MP M+G E+L++I++ S ++P+++++++ ++D
Sbjct: 34 NGREALNSFYKEKPDLIVLDWMMPEMSGIEVLREIRKKS---QIPIIMLTAKT--EEVDK 88
Query: 196 CL--EEGAEEYIVKPVKLSD 213
+ E G ++Y+VKP L +
Sbjct: 89 LIGFEFGVDDYVVKPFSLRE 108
>TIGR_CMR|CPS_1619 [details] [associations]
symbol:CPS_1619 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR009061
InterPro:IPR010093 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0000166 GO:GO:0035556 GO:GO:0003677
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745 SUPFAM:SSF46955
TIGRFAMs:TIGR01764 ProtClustDB:CLSK741041 RefSeq:YP_268357.1
ProteinModelPortal:Q485A8 STRING:Q485A8 GeneID:3520728
KEGG:cps:CPS_1619 PATRIC:21466431 HOGENOM:HOG000133916 OMA:DEYEIAM
BioCyc:CPSY167879:GI48-1696-MONOMER Uniprot:Q485A8
Length = 185
Score = 107 (42.7 bits), Expect = 0.00027, P = 0.00027
Identities = 19/76 (25%), Positives = 40/76 (52%)
Query: 137 GEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
G ++ + +K ++I D MP + G+ + K I+ + + P++ MS I+
Sbjct: 98 GFEAGSMIEKIKPSIIFLDLVMPDIDGFAVCKHIRSNEASKNTPIIAMSGLSQQENIEKV 157
Query: 197 LEEGAEEYIVKPVKLS 212
+ GA +++KP++LS
Sbjct: 158 IASGANTFLMKPIRLS 173
>TIGR_CMR|CHY_1018 [details] [associations]
symbol:CHY_1018 "chemotaxis response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 OMA:PFQAPKV
RefSeq:YP_359865.1 ProteinModelPortal:Q3ADB9 SMR:Q3ADB9
STRING:Q3ADB9 GeneID:3728492 KEGG:chy:CHY_1018 PATRIC:21275169
BioCyc:CHYD246194:GJCN-1017-MONOMER Uniprot:Q3ADB9
Length = 121
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 29/114 (25%), Positives = 58/114 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VL VDD+ R +I+ +L + +V E+G +A++ + LK +++
Sbjct: 5 VLIVDDAAFMRMMIKNILVKNGYEVVGEAENGAQAVEM-----------YKELKPDVVTM 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D TMP M G + +++IK+ + +++ S+ + ++ GA ++IVKP
Sbjct: 54 DITMPEMDGIQAVREIKK--IDPNAKIIMCSAMGQQALVMEAIQAGAIDFIVKP 105
>TIGR_CMR|GSU_3198 [details] [associations]
symbol:GSU_3198 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 RefSeq:NP_954239.1
HSSP:P04042 ProteinModelPortal:Q747R7 GeneID:2687002
KEGG:gsu:GSU3198 PATRIC:22029251 OMA:PSARIIM ProtClustDB:CLSK829154
BioCyc:GSUL243231:GH27-3148-MONOMER Uniprot:Q747R7
Length = 121
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 30/113 (26%), Positives = 57/113 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+ VDD+ R ++ +L+ + +V A S DG ++ V F ++ +++ D
Sbjct: 5 VMIVDDALFMRNMLRGILEDAGYEVVAEAS----------DGAEAVVTFRDVRPDVVTLD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP G E L++I ++ + VVI S+ + +D GA+++I+KP
Sbjct: 55 IIMPVKNGIEALREIM--AIDPKARVVICSAVGQESLVDKARSVGAKDFILKP 105
>UNIPROTKB|P14376 [details] [associations]
symbol:rcsC "RcsC sensory histidine kinase" species:83333
"Escherichia coli K-12" [GO:0018106 "peptidyl-histidine
phosphorylation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046777
"protein autophosphorylation" evidence=IMP] [GO:0044010
"single-species biofilm formation" evidence=IMP] [GO:0071470
"cellular response to osmotic stress" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IDA] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA;IDA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR019017 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 Pfam:PF09456 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50112 PROSITE:PS51426 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:U00096_GR GO:GO:0046777 GO:GO:0005622
GO:GO:0071470 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
BRENDA:2.7.13.3 GO:GO:0018106 GO:GO:0044010 EMBL:M28242 EMBL:L11272
PIR:H64991 RefSeq:NP_416722.2 PDB:2AYX PDB:2AYY PDB:2AYZ
PDBsum:2AYX PDBsum:2AYY PDBsum:2AYZ ProteinModelPortal:P14376
SMR:P14376 DIP:DIP-10647N IntAct:P14376 MINT:MINT-1267658
PRIDE:P14376 EnsemblBacteria:EBESCT00000001645
EnsemblBacteria:EBESCT00000017555 GeneID:948993 KEGG:eco:b2218
PATRIC:32119795 EchoBASE:EB0815 EcoGene:EG10822
HOGENOM:HOG000122300 KO:K07677 OMA:HPINRSL ProtClustDB:PRK10841
BioCyc:EcoCyc:RCSC-MONOMER BioCyc:ECOL316407:JW5917-MONOMER
BioCyc:ECOL316407:JW5920-MONOMER EvolutionaryTrace:P14376
Genevestigator:P14376 Uniprot:P14376
Length = 949
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 42/176 (23%), Positives = 86/176 (48%)
Query: 40 GAPTQRFP--FAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVL 97
G P ++ P + +S+ H + + + E + + P A V++ + ++ +L
Sbjct: 771 GIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKA-VSD-NDDMMIL 828
Query: 98 AVDDSYVDRKLI-ERLLQIS-SCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VDD ++R+L+ ++L + CK TA G AL L + ++++++D
Sbjct: 829 VVDDHPINRRLLADQLGSLGYQCK-TA-NDGVDALNVLSKN-----------HIDIVLSD 875
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MP M GY L ++I++ + +PV+ +++ + + CLE G + + KPV L
Sbjct: 876 VNMPNMDGYRLTQRIRQLGL--TLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>TIGR_CMR|CPS_0681 [details] [associations]
symbol:CPS_0681 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 RefSeq:YP_267431.1 ProteinModelPortal:Q488T3
STRING:Q488T3 GeneID:3522148 KEGG:cps:CPS_0681 PATRIC:21464685
BioCyc:CPSY167879:GI48-768-MONOMER Uniprot:Q488T3
Length = 246
Score = 110 (43.8 bits), Expect = 0.00030, P = 0.00030
Identities = 20/70 (28%), Positives = 45/70 (64%)
Query: 145 DALKVN---LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQIDSCLEEG 200
D +K N +++ D +PG+ G E+ + I++ ++VP++++++ D ++ LE G
Sbjct: 39 DVIKKNTTDIVLLDVMLPGLNGIEVCRLIRQHEQSKQVPIIMLTARADEFDEVIG-LEAG 97
Query: 201 AEEYIVKPVK 210
A++Y++KPV+
Sbjct: 98 ADDYVIKPVR 107
>UNIPROTKB|Q4K4R2 [details] [associations]
symbol:creB "DNA-binding response regulator CreB"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 EMBL:CP000076
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 KO:K07663 ProtClustDB:PRK11083
RefSeq:YP_262771.2 ProteinModelPortal:Q4K4R2 GeneID:3480085
KEGG:pfl:PFL_5713 PATRIC:19880927
BioCyc:PFLU220664:GIX8-5753-MONOMER Uniprot:Q4K4R2
Length = 226
Score = 109 (43.4 bits), Expect = 0.00032, P = 0.00032
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L V+D + LQ T + G AL++ +Q++ +LII
Sbjct: 3 HILIVEDEAAIADTLIFALQGEGFTTTWLSLGRAALEH-----QQAS------PADLIIL 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC--LEEGAEEYIVKP 208
D +P ++G+E K+++ F EVPV+ +S+ D +ID LE GA++Y+VKP
Sbjct: 52 DIGLPDISGFETCKQLRR---FSEVPVMFLSARD--GEIDRVVGLEIGADDYVVKP 102
>TIGR_CMR|BA_5068 [details] [associations]
symbol:BA_5068 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:Q9WYN0
RefSeq:NP_847259.1 RefSeq:YP_021717.1 RefSeq:YP_030951.1
ProteinModelPortal:Q81KD2 DNASU:1084352
EnsemblBacteria:EBBACT00000008736 EnsemblBacteria:EBBACT00000013851
EnsemblBacteria:EBBACT00000021438 GeneID:1084352 GeneID:2816207
GeneID:2851510 KEGG:ban:BA_5068 KEGG:bar:GBAA_5068 KEGG:bat:BAS4707
OMA:FMKNQGI ProtClustDB:CLSK917509
BioCyc:BANT260799:GJAJ-4761-MONOMER
BioCyc:BANT261594:GJ7F-4923-MONOMER Uniprot:Q81KD2
Length = 229
Score = 109 (43.4 bits), Expect = 0.00033, P = 0.00033
Identities = 23/75 (30%), Positives = 51/75 (68%)
Query: 136 DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
DG+++ V F+ +V+L+I D +P + G+ + ++I+++S EVP++++++ + + D+
Sbjct: 34 DGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTS---EVPIIMLTAR--VDEDDT 88
Query: 196 CL--EEGAEEYIVKP 208
L E GA++Y+ KP
Sbjct: 89 LLGFELGADDYVTKP 103
>UNIPROTKB|Q9KUA1 [details] [associations]
symbol:VC_0622 "Sensory box sensor histidine
kinase/response regulator" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 SMART:SM00091 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HSSP:P08402 PIR:A82300
RefSeq:NP_230271.1 ProteinModelPortal:Q9KUA1 DNASU:2615410
GeneID:2615410 KEGG:vch:VC0622 PATRIC:20080353 OMA:SLYVSSQ
ProtClustDB:CLSK874044 Uniprot:Q9KUA1
Length = 1177
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 29/116 (25%), Positives = 63/116 (54%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V+ ++++ L++ +V + G + L+ + + K L++ D
Sbjct: 772 LLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKRE-----------KPELVLLD 820
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL---EEGAEEYIVKP 208
MPGM+GY++ +K++++ E+P++++++ L Q D + E GA +Y+ KP
Sbjct: 821 IMMPGMSGYQVCEKLRQTYDHAELPIIMLTA---LNQSDDRVRGFEAGANDYLSKP 873
>TIGR_CMR|VC_0622 [details] [associations]
symbol:VC_0622 "sensory box sensor histidine
kinase/response regulator" species:686 "Vibrio cholerae O1 biovar
El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 Pfam:PF13188
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885 SMART:SM00091
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HSSP:P08402 PIR:A82300
RefSeq:NP_230271.1 ProteinModelPortal:Q9KUA1 DNASU:2615410
GeneID:2615410 KEGG:vch:VC0622 PATRIC:20080353 OMA:SLYVSSQ
ProtClustDB:CLSK874044 Uniprot:Q9KUA1
Length = 1177
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 29/116 (25%), Positives = 63/116 (54%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V+ ++++ L++ +V + G + L+ + + K L++ D
Sbjct: 772 LLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKRE-----------KPELVLLD 820
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL---EEGAEEYIVKP 208
MPGM+GY++ +K++++ E+P++++++ L Q D + E GA +Y+ KP
Sbjct: 821 IMMPGMSGYQVCEKLRQTYDHAELPIIMLTA---LNQSDDRVRGFEAGANDYLSKP 873
>UNIPROTKB|P52076 [details] [associations]
symbol:qseB "QseB-Phosphorylated DNA-binding
transcriptional activator" species:83333 "Escherichia coli K-12"
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0009372
"quorum sensing" evidence=IMP] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA;IMP] [GO:0010038 "response to
metal ion" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=EXP;IEA] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0005737 GO:GO:0006355 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 EMBL:U28377
GO:GO:0010628 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0009372 GO:GO:0010038 eggNOG:COG0745 GO:GO:0001046
GO:GO:0032993 HOGENOM:HOG000034815 PIR:G65089 RefSeq:NP_417497.1
RefSeq:YP_491217.1 ProteinModelPortal:P52076 SMR:P52076
IntAct:P52076 EnsemblBacteria:EBESCT00000002399
EnsemblBacteria:EBESCT00000002400 EnsemblBacteria:EBESCT00000016727
GeneID:12933397 GeneID:945369 KEGG:ecj:Y75_p2951 KEGG:eco:b3025
PATRIC:32121462 EchoBASE:EB2844 EcoGene:EG13026 KO:K07666
OMA:LFFCTSP ProtClustDB:PRK10336 BioCyc:EcoCyc:G7575-MONOMER
BioCyc:ECOL316407:JW2993-MONOMER Genevestigator:P52076
Uniprot:P52076
Length = 219
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 137 GEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
G Q + + +I D T+PGM G ++L++ +E RE PV+I+++ D L +
Sbjct: 33 GRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQ-RE-PVLILTARDALAERVEG 90
Query: 197 LEEGAEEYIVKPVKL 211
L GA++Y+ KP L
Sbjct: 91 LRLGADDYLCKPFAL 105
>UNIPROTKB|P30843 [details] [associations]
symbol:basR "BasR transcriptional regulator" species:83333
"Escherichia coli K-12" [GO:0035556 "intracellular signal
transduction" evidence=IEA;IDA] [GO:0010041 "response to iron(III)
ion" evidence=IEP;IMP] [GO:0046677 "response to antibiotic"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA;IDA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;IDA] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0005737 GO:GO:0006355 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
GO:GO:0046677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
EMBL:U14003 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0745 GO:GO:0010041 EMBL:D14055 EMBL:AY725270
EMBL:AY725271 EMBL:AY725272 EMBL:AY725273 EMBL:AY725274
EMBL:AY725275 EMBL:AY725276 EMBL:AY725277 EMBL:AY725278
EMBL:AY725279 EMBL:AY725280 EMBL:AY725281 EMBL:AY725282
EMBL:AY725283 EMBL:AY725284 EMBL:AY725285 EMBL:AY725286
EMBL:AY725287 EMBL:AY725288 EMBL:AY725289 EMBL:AY725290
EMBL:AY725291 EMBL:AY725292 EMBL:AY725293 EMBL:AY725294
EMBL:AY725295 EMBL:AY725296 EMBL:AY725297 EMBL:AY725298
EMBL:AY725299 EMBL:AY725300 EMBL:AY725301 EMBL:AY725302
EMBL:AY725303 EMBL:AY725304 EMBL:AY725305 EMBL:AY725306
EMBL:AY725307 EMBL:AY725308 EMBL:AY725309 EMBL:AY725310
EMBL:AY725311 EMBL:AY725312 EMBL:AY725313 EMBL:AY725314
EMBL:AY725315 EMBL:AY725316 EMBL:AY725317 EMBL:AY725318
EMBL:AY725319 EMBL:AY725320 EMBL:AY725321 EMBL:AY725322
EMBL:AY725323 EMBL:AY725324 EMBL:AY725325 EMBL:AY725326
EMBL:AY725327 EMBL:AY725328 EMBL:AY725329 EMBL:AY725330
EMBL:AY725331 EMBL:AY725332 EMBL:AY725333 PIR:H65220
RefSeq:NP_418537.1 RefSeq:YP_492256.1 ProteinModelPortal:P30843
SMR:P30843 DIP:DIP-9201N IntAct:P30843 PRIDE:P30843
EnsemblBacteria:EBESCT00000004571 EnsemblBacteria:EBESCT00000015954
GeneID:12934089 GeneID:948631 KEGG:ecj:Y75_p4000 KEGG:eco:b4113
PATRIC:32123791 EchoBASE:EB1572 EcoGene:EG11615 KO:K07771
OMA:GKATIRT ProtClustDB:PRK10643 BioCyc:EcoCyc:BASR-MONOMER
BioCyc:ECOL316407:JW4074-MONOMER Genevestigator:P30843
Uniprot:P30843
Length = 222
Score = 108 (43.1 bits), Expect = 0.00039, P = 0.00039
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L V+D D L++ L+ + + A +S T A EQS +A +L++
Sbjct: 1 MKILIVED---DTLLLQGLILAAQTEGYACDSVTTARM-----AEQS---LEAGHYSLVV 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +P G L +I++ +PV+I+++ D LT + L+ GA++Y+VKP L +
Sbjct: 50 LDLGLPDEDGLHFLARIRQKKY--TLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEE 107
>TIGR_CMR|CJE_1397 [details] [associations]
symbol:CJE_1397 "DNA-binding response regulator"
species:195099 "Campylobacter jejuni RM1221" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0005622 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 KO:K02483 RefSeq:YP_179383.1
ProteinModelPortal:Q5HTK2 STRING:Q5HTK2 GeneID:3231903
KEGG:cjr:CJE1397 PATRIC:20044596 OMA:CREIREK ProtClustDB:CLSK879174
BioCyc:CJEJ195099:GJC0-1424-MONOMER Uniprot:Q5HTK2
Length = 223
Score = 108 (43.1 bits), Expect = 0.00040, P = 0.00040
Identities = 33/115 (28%), Positives = 61/115 (53%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
++VL ++D +L+ L + K+T E+ AL +G+ G +D L I
Sbjct: 2 INVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALN-VGIQG------YDCL-----I 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D T+PG+ G E+ ++I++ S +P++I S+ L+ L+ GA++Y+ KP
Sbjct: 50 LDLTLPGIDGLEVCREIRQKS---NIPIIISSARGDLSDKVVGLQIGADDYLPKP 101
>TIGR_CMR|NSE_0512 [details] [associations]
symbol:NSE_0512 "response regulator/GGDEF domain protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG3706 EMBL:CP000237
GenomeReviews:CP000237_GR KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_506396.1 ProteinModelPortal:Q2GDQ0
STRING:Q2GDQ0 GeneID:3931788 KEGG:nse:NSE_0512 PATRIC:22681073
OMA:TELGIND BioCyc:NSEN222891:GHFU-532-MONOMER Uniprot:Q2GDQ0
Length = 456
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 31/116 (26%), Positives = 60/116 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD + K++E L +V SG A++ +Q + ++I+ D
Sbjct: 5 ILVVDDIPSNIKILEIKLTAKYYQVITASSGIAAIEL----AKQH-------QPDVILLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVKPVK 210
MP M G+E +++K +PV+I+++ D+ +++ L GA++++VKP K
Sbjct: 54 VMMPEMDGFETCRRLKSDYATMHIPVIIVTALNDIENKVEG-LNSGADDFLVKPAK 108
>TIGR_CMR|GSU_0776 [details] [associations]
symbol:GSU_0776 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_951833.1 ProteinModelPortal:Q74F33 GeneID:2685232
KEGG:gsu:GSU0776 PATRIC:22024313 OMA:KELPIWR ProtClustDB:CLSK828021
BioCyc:GSUL243231:GH27-778-MONOMER Uniprot:Q74F33
Length = 465
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL--GLDGEQSNVGFDALKVNLII 153
+L DD R+ ++++ Q +V GT L + G DG DA ++++
Sbjct: 6 ILICDDEEGIRRYLQKMFQAKEFEVETFADGTSLLARIEAGTDG-------DA---DILL 55
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M G E+LK++K+ + +PVV+M++ + ++ GA +Y+ KP
Sbjct: 56 QDVRMPDMDGIEVLKRVKK--LRPSLPVVVMTAFGTIDSAVDAIKLGAYDYVTKP 108
>TIGR_CMR|SO_3988 [details] [associations]
symbol:SO_3988 "aerobic respiration control protein ArcA"
species:211586 "Shewanella oneidensis MR-1" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR016032
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 KO:K07773
OMA:QRTMQEN ProtClustDB:PRK11173 SUPFAM:SSF46894 HSSP:P08402
RefSeq:NP_719518.1 ProteinModelPortal:Q8EAB9 SMR:Q8EAB9
GeneID:1171620 KEGG:son:SO_3988 PATRIC:23527652 Uniprot:Q8EAB9
Length = 238
Score = 108 (43.1 bits), Expect = 0.00048, P = 0.00048
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L V+D V R + + + VT G + + Q N K+NL++
Sbjct: 5 HILIVEDEAVTRNTLRSIFEAEGYVVTEANDGAEMHKAM-----QEN------KINLVVM 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL--EEGAEEYIVKP 208
D +PG G L ++++E + ++ ++ D ++D L E GA++YI KP
Sbjct: 54 DINLPGKNGLLLARELRE---INNIGLIFLTGRD--NEVDKILGLEIGADDYITKP 104
>TIGR_CMR|GSU_0149 [details] [associations]
symbol:GSU_0149 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 HSSP:P06143 RefSeq:NP_951211.1
ProteinModelPortal:Q74GU5 GeneID:2687911 KEGG:gsu:GSU0149
PATRIC:22023046 HOGENOM:HOG000135524 OMA:ISHKFRT
ProtClustDB:CLSK827668 BioCyc:GSUL243231:GH27-183-MONOMER
Uniprot:Q74GU5
Length = 371
Score = 111 (44.1 bits), Expect = 0.00052, P = 0.00052
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD V R L + L+ G R LQ G DGE++ F+ +++I+TD
Sbjct: 16 ILVVDDESVIRDLCAKALK-----------GYRVLQ-AG-DGEEALRLFERGGIDVILTD 62
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MP + G ELL+++KE + V++M+ I + L+ A+++I KP+ L
Sbjct: 63 VMMPKLNGIELLRRLKEMEP--TLVVIVMTGYAEKDIILNALKADADDFITKPLNL 116
>TIGR_CMR|DET_0177 [details] [associations]
symbol:DET_0177 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034815
RefSeq:YP_180925.1 ProteinModelPortal:Q3ZA24 STRING:Q3ZA24
GeneID:3230544 KEGG:det:DET0177 PATRIC:21607433 OMA:CIIKNEA
ProtClustDB:CLSK837633 BioCyc:DETH243164:GJNF-177-MONOMER
Uniprot:Q3ZA24
Length = 226
Score = 107 (42.7 bits), Expect = 0.00054, P = 0.00054
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 94 LHVLAVDDSYVDRKLIERLLQIS--SCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+++L V+D+ I +L++S K+T +G A++ + D K +L
Sbjct: 1 MNILIVEDNDAAASTISSILRLSYHDAKITVCRTGYEAVESVNSD-----------KADL 49
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ D +P M G LK + E P++++++ + + LE+GA+EYI KP +
Sbjct: 50 VLLDLGLPDMNG---LKVLDEIHPITGAPIIVVTACEDEENVLKALEQGADEYITKPFR 105
>TIGR_CMR|APH_0551 [details] [associations]
symbol:APH_0551 "response regulator/GGDEF domain protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_505143.1 ProteinModelPortal:Q2GKF8
STRING:Q2GKF8 GeneID:3930248 KEGG:aph:APH_0551 PATRIC:20949762
OMA:VERENDF BioCyc:APHA212042:GHPM-575-MONOMER Uniprot:Q2GKF8
Length = 456
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD + KL++ L V SG A++ E+ + +LI+ D
Sbjct: 5 ILIVDDLPSNIKLLQAKLTAEYYTVITATSGPEAIRM----AEEH-------QPDLILLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLT--QIDSCLEEGAEEYIVKPV 209
MPGM GYE K ++ + +P+V++++ D T +++ L GA+++++KP+
Sbjct: 54 VMMPGMDGYETCKNMRTNPAIAYIPIVMVTALDNTTSNRVNG-LSAGADDFLIKPI 108
>TIGR_CMR|SPO_2087 [details] [associations]
symbol:SPO_2087 "nitrogen regulation protein NtrC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0009399
"nitrogen fixation" evidence=ISS] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR002197 InterPro:IPR003593
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158 Pfam:PF02954
PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382
SMART:SM00448 GO:GO:0005524 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0017111
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00688 KO:K07712 RefSeq:YP_167317.1
ProteinModelPortal:Q5LRN8 DNASU:3195357 GeneID:3195357
KEGG:sil:SPO2087 PATRIC:23377515 OMA:YEEAGSA ProtClustDB:CLSK933754
Uniprot:Q5LRN8
Length = 457
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL DD R ++ + L + CKV A S T ++++ +G K +++I+D
Sbjct: 5 VLVADDDRTIRTVLTQALTRAGCKVHATSSLTTLMRWVA-EG----------KGDVVISD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSED-VLTQIDSCLEEGAEEYIVKPVKLSD 213
MP G E+L KI + +PV+++S+++ ++T I + E A +Y+ KP L D
Sbjct: 54 VVMPDGNGLEMLPKIAQDRP--GLPVIVISAQNTIMTAIQAA-EAEAYDYLPKPFDLPD 109
>TIGR_CMR|SO_1558 [details] [associations]
symbol:SO_1558 "phosphate regulon response regulator PhoB"
species:211586 "Shewanella oneidensis MR-1" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR011879 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006817
HOGENOM:HOG000034819 HSSP:P08402 KO:K07657 OMA:QVLEMGP
TIGRFAMs:TIGR02154 RefSeq:NP_717171.2 ProteinModelPortal:Q8EGP1
GeneID:1169364 KEGG:son:SO_1558 PATRIC:23522760
ProtClustDB:CLSK906318 Uniprot:Q8EGP1
Length = 229
Score = 107 (42.7 bits), Expect = 0.00056, P = 0.00056
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LI+ D+ PG +G +L K++K+ R++P++++++ LE GA++YI KP
Sbjct: 48 DLILLDWMFPGGSGIQLAKRLKQDEFTRQIPIIMLTARGEEEDKVKGLEVGADDYITKP 106
>TIGR_CMR|SO_2547 [details] [associations]
symbol:SO_2547 "response regulator" species:211586
"Shewanella oneidensis MR-1" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 OMA:QHEDLNT
HSSP:Q56312 RefSeq:NP_718133.1 ProteinModelPortal:Q8EE43
GeneID:1170254 KEGG:son:SO_2547 PATRIC:23524721
ProtClustDB:CLSK793943 Uniprot:Q8EE43
Length = 121
Score = 90 (36.7 bits), Expect = 0.00058, P = 0.00058
Identities = 33/117 (28%), Positives = 55/117 (47%)
Query: 96 VLAVDDSYVDRKLIERLLQIS-SCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
V DDS + RK + R L ++T +G AL E +N G K ++
Sbjct: 5 VTIADDSLMSRKAVRRALPEDWDVEITEACNGKEAL-------EAANSG----KAEVLFL 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE-GAEEYIVKPVK 210
D TMP + G+ +LK + E + VVI+ S D+ + ++ GA ++ KP++
Sbjct: 54 DLTMPELDGFGVLKYLHEQ---QSKTVVIVISADIQPEAKLLVDSLGAFRFLQKPLQ 107
>TAIR|locus:2061971 [details] [associations]
symbol:CKI1 "CYTOKININ-INDEPENDENT 1" species:3702
"Arabidopsis thaliana" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA;TAS] [GO:0000160 "phosphorelay
signal transduction system" evidence=IEA] [GO:0004673 "protein
histidine kinase activity" evidence=IEA;ISS;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0018106 "peptidyl-histidine phosphorylation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=TAS] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0080117 "secondary
growth" evidence=IMP] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 GO:GO:0042803
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0009736 GO:GO:0023014 GO:GO:0010087
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0004673
GO:GO:0080117 GO:GO:0009553 EMBL:AC002535 EMBL:D87545 EMBL:EF598269
EMBL:EF598270 EMBL:EF598271 EMBL:EF598272 EMBL:EF598273
EMBL:EF598274 EMBL:EF598275 EMBL:EF598276 EMBL:EF598277
EMBL:EF598278 EMBL:EF598279 EMBL:EF598280 EMBL:EF598281
EMBL:EF598282 EMBL:EF598283 EMBL:EF598284 EMBL:EF598285
EMBL:EF598286 EMBL:EF598287 EMBL:EF598288 EMBL:EF598289
EMBL:EF598290 EMBL:EF598291 IPI:IPI00546838 PIR:T00441
RefSeq:NP_182265.1 UniGene:At.341 PDB:3MM4 PDB:3MMN PDBsum:3MM4
PDBsum:3MMN ProteinModelPortal:O22267 SMR:O22267 IntAct:O22267
STRING:O22267 PaxDb:O22267 PRIDE:O22267 EnsemblPlants:AT2G47430.1
GeneID:819356 KEGG:ath:AT2G47430 TAIR:At2g47430
HOGENOM:HOG000114067 InParanoid:O22267 OMA:CPSSREL PhylomeDB:O22267
ProtClustDB:CLSN2913155 Genevestigator:O22267 Uniprot:O22267
Length = 1122
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 96 VLAVDDSYVDRKLIE-RLLQISSCKVTAVESGTRALQYL--GLDGEQSNVGFDALKVNLI 152
VL VDD+++ RK+ +L ++ +V +SG AL+ + GL + D L + I
Sbjct: 988 VLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYI 1047
Query: 153 ITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSED 188
D MP M GYE ++I+ E S P++ +S D
Sbjct: 1048 FMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 1085
>TIGR_CMR|SPO_0132 [details] [associations]
symbol:SPO_0132 "sensor histidine kinase/response
regulator" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936 RefSeq:YP_165404.1
ProteinModelPortal:Q5LWT5 GeneID:3196450 KEGG:sil:SPO0132
PATRIC:23373509 HOGENOM:HOG000250541 OMA:RRLWHSI
ProtClustDB:CLSK933165 Uniprot:Q5LWT5
Length = 739
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 32/115 (27%), Positives = 60/115 (52%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD V+R ++E+ L +VT SG +AL+ + D V+L+++
Sbjct: 461 HVLIVDDLAVNRAILEKQLAQLGVRVTCCASGAQALEKMS----------DC--VDLVLS 508
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D+ MP M G EL + ++ + + ++P+ ++SS + D + + + KP+
Sbjct: 509 DHNMPEMDGLELAEALRGAG-WSDLPIFLLSSNPGMAHADPA-KRHVQGILQKPI 561
>TIGR_CMR|SPO_1679 [details] [associations]
symbol:SPO_1679 "DNA-binding response regulator CtrA"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034815 RefSeq:YP_166918.1
ProteinModelPortal:Q5LST7 GeneID:3194546 KEGG:sil:SPO1679
PATRIC:23376683 KO:K13584 OMA:PDMNGHE ProtClustDB:CLSK863578
Uniprot:Q5LST7
Length = 238
Score = 107 (42.7 bits), Expect = 0.00063, P = 0.00063
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L V+D K IE +L ++ V A + G + L +D +LI+
Sbjct: 1 MRILLVEDDPTTSKSIELMLTHANLNVYATDLGEEGIDLAKL--------YD---YDLIL 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVKP 208
D +P M G+E+L++++ S + E P++I+S +D ++I GA++Y+ KP
Sbjct: 50 LDINLPDMNGHEVLRQLRMSRI--ETPILILSGVDDTESKIKG-FGFGADDYLTKP 102
>TAIR|locus:2102960 [details] [associations]
symbol:RR22 "response regulator 22" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IC] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008969 "phosphohistidine phosphatase activity"
evidence=IDA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0006351 GO:GO:0009736 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC016829
HOGENOM:HOG000034820 EMBL:AY085638 IPI:IPI00533052
RefSeq:NP_001078102.1 RefSeq:NP_187078.1 RefSeq:NP_850511.1
UniGene:At.40865 ProteinModelPortal:Q9M8Y4 SMR:Q9M8Y4 STRING:Q9M8Y4
EnsemblPlants:AT3G04280.1 EnsemblPlants:AT3G04280.2
EnsemblPlants:AT3G04280.3 GeneID:819583 KEGG:ath:AT3G04280
GeneFarm:4131 TAIR:At3g04280 InParanoid:Q9M8Y4 OMA:DKEMPER
PhylomeDB:Q9M8Y4 ProtClustDB:CLSN2684276 Genevestigator:Q9M8Y4
GermOnline:AT3G04280 GO:GO:0008969 Uniprot:Q9M8Y4
Length = 142
Score = 98 (39.6 bits), Expect = 0.00066, P = 0.00066
Identities = 40/123 (32%), Positives = 61/123 (49%)
Query: 89 ECSKEL-HVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
E K+L +VL VDD ++R+L E +++ I TA ++G A+ L DGE S FD
Sbjct: 16 EVKKKLINVLIVDDDPLNRRLHEMIIKTIGGISQTA-KNGEEAV-ILHRDGEAS---FD- 69
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
LI+ D MP G KK++E V + V + S D + + +E G +
Sbjct: 70 ----LILMDKEMPERDGVSTTKKLREMKVTSMI-VGVTSVADQEEERKAFMEAGLNHCLE 124
Query: 207 KPV 209
KP+
Sbjct: 125 KPL 127
>TIGR_CMR|BA_0651 [details] [associations]
symbol:BA_0651 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034819 SUPFAM:SSF46894 HSSP:P08402 RefSeq:NP_843182.1
RefSeq:YP_017279.1 RefSeq:YP_026895.1 ProteinModelPortal:Q81V49
DNASU:1088070 EnsemblBacteria:EBBACT00000008363
EnsemblBacteria:EBBACT00000015665 EnsemblBacteria:EBBACT00000022532
GeneID:1088070 GeneID:2814886 GeneID:2850289 KEGG:ban:BA_0651
KEGG:bar:GBAA_0651 KEGG:bat:BAS0618 OMA:LWDEAKH
ProtClustDB:CLSK915873 BioCyc:BANT260799:GJAJ-677-MONOMER
BioCyc:BANT261594:GJ7F-704-MONOMER Uniprot:Q81V49
Length = 225
Score = 106 (42.4 bits), Expect = 0.00072, P = 0.00072
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDD +L+ L SG A+ ++ E N F I+
Sbjct: 2 IDILLVDDEPRMLELLTLYLTPIGYNCICARSGEEAISHI----ENQNFKF-------IL 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M G+E KKI+ F VP++++++ D + L+ GA++Y+ KP
Sbjct: 51 LDIMMPKMDGWETCKKIRS---FSNVPIIMVTARDQTIDVVQGLKLGADDYVTKP 102
>UNIPROTKB|Q9KSB0 [details] [associations]
symbol:VC_1349 "Sensory box sensor histidine
kinase/response regulator" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50894
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
InterPro:IPR013656 Pfam:PF08448 PIR:H82211 RefSeq:NP_230993.1
ProteinModelPortal:Q9KSB0 DNASU:2614803 GeneID:2614803
KEGG:vch:VC1349 PATRIC:20081774 OMA:NDSARNI ProtClustDB:CLSK794089
Uniprot:Q9KSB0
Length = 1331
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 31/116 (26%), Positives = 61/116 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L V+D+ V++++ LLQ + V G AL+ L E ++ FD L++ D
Sbjct: 994 LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERL----EHAD--FD-----LVLMD 1042
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MP M G + I+ + + +P+V M++ + I+ CL+ G +++ KP+++
Sbjct: 1043 MQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEV 1098
>TIGR_CMR|VC_1349 [details] [associations]
symbol:VC_1349 "sensory box sensor histidine
kinase/response regulator" species:686 "Vibrio cholerae O1 biovar
El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF01627
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50894 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 PIR:H82211
RefSeq:NP_230993.1 ProteinModelPortal:Q9KSB0 DNASU:2614803
GeneID:2614803 KEGG:vch:VC1349 PATRIC:20081774 OMA:NDSARNI
ProtClustDB:CLSK794089 Uniprot:Q9KSB0
Length = 1331
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 31/116 (26%), Positives = 61/116 (52%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L V+D+ V++++ LLQ + V G AL+ L E ++ FD L++ D
Sbjct: 994 LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERL----EHAD--FD-----LVLMD 1042
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MP M G + I+ + + +P+V M++ + I+ CL+ G +++ KP+++
Sbjct: 1043 MQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEV 1098
>TIGR_CMR|SPO_0251 [details] [associations]
symbol:SPO_0251 "DNA-binding response regulator PetR"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR016032
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819
SUPFAM:SSF46894 KO:K07659 RefSeq:YP_165515.1
ProteinModelPortal:Q5LX38 GeneID:3196152 KEGG:sil:SPO0251
PATRIC:23373753 OMA:DRGQAQE ProtClustDB:CLSK933195 Uniprot:Q5LX38
Length = 233
Score = 106 (42.4 bits), Expect = 0.00080, P = 0.00079
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL-GLDGEQSNVGFDALKVNL 151
+ H+L VDD R L+++ L VTA A + L GLD FD L
Sbjct: 5 DAHLLIVDDDERIRDLLKKFLMRHGFLVTAARDAEHARRILSGLD-------FD-----L 52
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+ D MPG G L + ++++ P++++++ + LE GA++Y+ KP
Sbjct: 53 IVMDVMMPGEDGVSLTRALRQTL---STPILLLTARGETEHRIAGLEAGADDYLAKP 106
>TIGR_CMR|BA_1497 [details] [associations]
symbol:BA_1497 "DNA-binding response regulator ResD"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009060 "aerobic respiration"
evidence=ISS] [GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402 RefSeq:NP_843949.1
RefSeq:YP_018120.1 RefSeq:YP_027655.1 ProteinModelPortal:Q81SZ6
DNASU:1087158 EnsemblBacteria:EBBACT00000009602
EnsemblBacteria:EBBACT00000013896 EnsemblBacteria:EBBACT00000020931
GeneID:1087158 GeneID:2818509 GeneID:2850870 KEGG:ban:BA_1497
KEGG:bar:GBAA_1497 KEGG:bat:BAS1386 KO:K07775 OMA:VWHYEFF
ProtClustDB:CLSK873069 BioCyc:BANT260799:GJAJ-1460-MONOMER
BioCyc:BANT261594:GJ7F-1522-MONOMER Uniprot:Q81SZ6
Length = 238
Score = 106 (42.4 bits), Expect = 0.00084, P = 0.00084
Identities = 31/117 (26%), Positives = 61/117 (52%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E +L VDD R+L++ L+ + ++G AL+ + L + +D LI
Sbjct: 4 ESRILIVDDEDRIRRLLKMYLEREQYTIEEADNGDTALE-MALQND-----YD-----LI 52
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQIDSCLEEGAEEYIVKP 208
+ D MPG G E+ K ++E + P+++++++ + + ++ E G ++YIVKP
Sbjct: 53 LLDLMMPGKDGIEVCKGVREK---KATPIIMLTAKGEEVNRVQG-FEVGTDDYIVKP 105
>ASPGD|ASPL0000074067 [details] [associations]
symbol:nikA species:162425 "Emericella nidulans"
[GO:0007234 "osmosensory signaling via phosphorelay pathway"
evidence=ISS] [GO:0071474 "cellular hyperosmotic response"
evidence=IMP] [GO:0071470 "cellular response to osmotic stress"
evidence=IMP] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEA]
[GO:0071473 "cellular response to cation stress" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 EMBL:BN001303
ProteinModelPortal:C8V8F5 EnsemblFungi:CADANIAT00005966 OMA:IGMTQLT
Uniprot:C8V8F5
Length = 1297
Score = 115 (45.5 bits), Expect = 0.00094, P = 0.00094
Identities = 32/123 (26%), Positives = 65/123 (52%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S+ +L +D+ V++KL ++L+ + V+ V +G A++ + +Q +D
Sbjct: 1104 SRSFDILLAEDNDVNQKLAVKILEKHNHNVSVVGNGLEAVEAV----KQRR--YD----- 1152
Query: 151 LIITDYTMPGMTGYELLKKIKE---SSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+I+ D MP M G+E KI+E S P++ +++ +L + C++ +EY+ K
Sbjct: 1153 VILMDVQMPVMGGFEATGKIREYERDSGLSRTPIIALTAHAMLGDREKCIQAQMDEYLSK 1212
Query: 208 PVK 210
P+K
Sbjct: 1213 PLK 1215
>UNIPROTKB|P07545 [details] [associations]
symbol:virG "Regulatory protein VirG" species:176299
"Agrobacterium fabrum str. C58" [GO:0000156 "phosphorelay response
regulator activity" evidence=TAS] [GO:0035556 "intracellular signal
transduction" evidence=TAS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 EMBL:J03320 EMBL:AE007871
GenomeReviews:AE007871_GR EMBL:Y00535 EMBL:M36786 EMBL:U16142
PIR:AH3249 PIR:S03760 RefSeq:NP_396499.1 ProteinModelPortal:P07545
STRING:P07545 GeneID:1137501 KEGG:atu:Atu6178 PATRIC:20820556
OMA:FLARIRV ProtClustDB:PRK13856 Uniprot:P07545
Length = 253
Score = 106 (42.4 bits), Expect = 0.00097, P = 0.00097
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL +DD R LI L I + KVTAV D +Q N + V++++
Sbjct: 15 HVLVIDDDVAMRHLIVEYLTIHAFKVTAVA-----------DSKQFNRVLCSETVDVVVV 63
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS--CLEEGAEEYIVKP 208
D + G E+++ + S +VP++I+S L + D LE GA ++I KP
Sbjct: 64 DLNLGREDGLEIVRSLATKS---DVPIIIISGAR-LEEADKVIALELGATDFIAKP 115
>NCBI_NP|NP_396499.1 [details] [associations]
symbol:virG "twocomponentresponseregulator"
species:176299 "Agrobacterium fabrum str. C58" [GO:0000156
"phosphorelay response regulator activity" evidence=TAS]
REFSEQ:NC_003065 Ncbi:NP_396499
Length = 253
Score = 106 (42.4 bits), Expect = 0.00097, P = 0.00097
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL +DD R LI L I + KVTAV D +Q N + V++++
Sbjct: 15 HVLVIDDDVAMRHLIVEYLTIHAFKVTAVA-----------DSKQFNRVLCSETVDVVVV 63
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS--CLEEGAEEYIVKP 208
D + G E+++ + S +VP++I+S L + D LE GA ++I KP
Sbjct: 64 DLNLGREDGLEIVRSLATKS---DVPIIIISGAR-LEEADKVIALELGATDFIAKP 115
>UNIPROTKB|Q9KNN9 [details] [associations]
symbol:VC_2692 "Transcriptional regulator CpxR"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0035556 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF46894
KO:K07662 HSSP:P08402 PIR:B82046 RefSeq:NP_232320.1
ProteinModelPortal:Q9KNN9 DNASU:2615520 GeneID:2615520
KEGG:vch:VC2692 PATRIC:20084402 OMA:HEYGDIK ProtClustDB:CLSK874884
Uniprot:Q9KNN9
Length = 228
Score = 105 (42.0 bits), Expect = 0.00098, P = 0.00098
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 127 TRALQYLGLDGEQSNVGFDAL-----KVNLIITDYTMPGMTGYELLKKIKESSVFREVPV 181
T LQY G + Q+N G L +++LI+ D MP + G E LK+++E PV
Sbjct: 18 TEVLQYEGFEISQANDGEAGLAAVSDEIDLILLDVMMPKLNGMETLKRLREKWA---TPV 74
Query: 182 VIMSSEDVLTQIDSC--LEEGAEEYIVKP 208
++++++ +ID LE GA++Y+ KP
Sbjct: 75 LMLTAKG--EEIDRVIGLELGADDYLPKP 101
>TIGR_CMR|VC_2692 [details] [associations]
symbol:VC_2692 "transcriptional regulator CpxR" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0035556 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF46894
KO:K07662 HSSP:P08402 PIR:B82046 RefSeq:NP_232320.1
ProteinModelPortal:Q9KNN9 DNASU:2615520 GeneID:2615520
KEGG:vch:VC2692 PATRIC:20084402 OMA:HEYGDIK ProtClustDB:CLSK874884
Uniprot:Q9KNN9
Length = 228
Score = 105 (42.0 bits), Expect = 0.00098, P = 0.00098
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 127 TRALQYLGLDGEQSNVGFDAL-----KVNLIITDYTMPGMTGYELLKKIKESSVFREVPV 181
T LQY G + Q+N G L +++LI+ D MP + G E LK+++E PV
Sbjct: 18 TEVLQYEGFEISQANDGEAGLAAVSDEIDLILLDVMMPKLNGMETLKRLREKWA---TPV 74
Query: 182 VIMSSEDVLTQIDSC--LEEGAEEYIVKP 208
++++++ +ID LE GA++Y+ KP
Sbjct: 75 LMLTAKG--EEIDRVIGLELGADDYLPKP 101
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 213 0.00084 112 3 11 22 0.37 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 210
No. of states in DFA: 592 (63 KB)
Total size of DFA: 166 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.80u 0.10s 18.90t Elapsed: 00:00:01
Total cpu time: 18.82u 0.10s 18.92t Elapsed: 00:00:01
Start: Sat May 11 12:45:21 2013 End: Sat May 11 12:45:22 2013
WARNINGS ISSUED: 1