BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048660
(213 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255540813|ref|XP_002511471.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223550586|gb|EEF52073.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 221
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 119/123 (96%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S+ELHVLAVDDS VDRK+IERLL+ISSCKVTAV+SGTRALQYLGLDGE+S+VGF+ LKVN
Sbjct: 24 SEELHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGTRALQYLGLDGEKSSVGFNDLKVN 83
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++LT+ID CLEEGAEE+IVKPVK
Sbjct: 84 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILTRIDRCLEEGAEEFIVKPVK 143
Query: 211 LSD 213
LSD
Sbjct: 144 LSD 146
>gi|224135721|ref|XP_002322144.1| type-a response regulator [Populus trichocarpa]
gi|222869140|gb|EEF06271.1| type-a response regulator [Populus trichocarpa]
gi|309951242|emb|CBX43991.1| putative A-type response regulator 10 [Populus x canadensis]
Length = 223
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/123 (82%), Positives = 118/123 (95%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S+ELHVLAVDDS+VDRK+IERLL+ISSCKVT VESG+RALQYLGLDGE+S+VGF+ LK+N
Sbjct: 26 SEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFNDLKIN 85
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAEEYI+KPVK
Sbjct: 86 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGAEEYILKPVK 145
Query: 211 LSD 213
LSD
Sbjct: 146 LSD 148
>gi|224135725|ref|XP_002322145.1| type-a arp3-like response regulator [Populus trichocarpa]
gi|222869141|gb|EEF06272.1| type-a arp3-like response regulator [Populus trichocarpa]
Length = 192
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/123 (82%), Positives = 118/123 (95%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S+ELHVLAVDDS+VDRK+IERLL+ISSCKVT VESG+RALQYLGLDGE+S+VGF+ LK+N
Sbjct: 26 SEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFNDLKIN 85
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAEEYI+KPVK
Sbjct: 86 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGAEEYILKPVK 145
Query: 211 LSD 213
LSD
Sbjct: 146 LSD 148
>gi|148608693|gb|ABQ95670.1| type A response regulator, partial [Malus x domestica]
Length = 194
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/119 (86%), Positives = 115/119 (96%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HV AVDDS+VDRK+IERLL+ISSCKVTAV+SGTRAL+YLGLDGE+S+VGFD +KVNLIIT
Sbjct: 1 HVFAVDDSHVDRKVIERLLKISSCKVTAVDSGTRALEYLGLDGEKSSVGFDNMKVNLIIT 60
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY+MPGMTGYELLKKIKESS FREVPVVIMSSE++LT+ID CLEEGAEEYIVKPVKLSD
Sbjct: 61 DYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILTRIDRCLEEGAEEYIVKPVKLSD 119
>gi|297733851|emb|CBI15098.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 118/126 (93%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
+ ELHVLAVDDS+VDRK+IERLL+ISSCKVTAVESGTRALQ+LGLDGE+++VGFD L
Sbjct: 97 SAAGSELHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDGEENSVGFDGL 156
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
KVNLI+TDY+MPGMTGYELLKKIKES FR++PVVIMSSE++LT+ID CLEEGAEE+IVK
Sbjct: 157 KVNLIMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVK 216
Query: 208 PVKLSD 213
PVKL+D
Sbjct: 217 PVKLAD 222
>gi|225457164|ref|XP_002283787.1| PREDICTED: two-component response regulator ARR5-like [Vitis
vinifera]
Length = 222
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/124 (81%), Positives = 117/124 (94%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
ELHVLAVDDS+VDRK+IERLL+ISSCKVTAVESGTRALQ+LGLDGE+++VGFD LKV
Sbjct: 25 AGSELHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDGEENSVGFDGLKV 84
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
NLI+TDY+MPGMTGYELLKKIKES FR++PVVIMSSE++LT+ID CLEEGAEE+IVKPV
Sbjct: 85 NLIMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPV 144
Query: 210 KLSD 213
KL+D
Sbjct: 145 KLAD 148
>gi|356516718|ref|XP_003527040.1| PREDICTED: two-component response regulator ARR6-like [Glycine max]
Length = 204
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 119/121 (98%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+LHVLAVDDS+VDRK+IERLL+ISSCKVT VESG+RALQYLGLDGE+S++GFD++ VNLI
Sbjct: 20 KLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVDVNLI 79
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPGMTGYELLKKIKESSVFREVPVV+MSSE++LT+IDSCLEEGAEE+++KPVKLS
Sbjct: 80 MTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLS 139
Query: 213 D 213
D
Sbjct: 140 D 140
>gi|351725781|ref|NP_001238384.1| uncharacterized protein LOC100306152 [Glycine max]
gi|255627697|gb|ACU14193.1| unknown [Glycine max]
Length = 201
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 119/121 (98%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+LHVLAVDDS+VDRK+IERLL+ISSCKVT VESG+RALQYLGLDGE+S++G D++KVNLI
Sbjct: 20 KLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGLDSVKVNLI 79
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPGMTGYELLKKIKESSVFREVPVV+MSSE++LT+IDSCLEEGAEE+++KPVKLS
Sbjct: 80 MTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLS 139
Query: 213 D 213
D
Sbjct: 140 D 140
>gi|33330864|gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/123 (82%), Positives = 114/123 (92%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+KELHVLAVDDS VDRK+IERLL+IS CKVTAVESG RALQYLGLDGE+S VGFD LKVN
Sbjct: 11 AKELHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEKSTVGFDGLKVN 70
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIK SS +E+PVVIMSSE++LT+ID CLEEGAEE++VKPVK
Sbjct: 71 LILTDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEEFLVKPVK 130
Query: 211 LSD 213
LSD
Sbjct: 131 LSD 133
>gi|356562779|ref|XP_003549646.1| PREDICTED: two-component response regulator ARR5-like isoform 1
[Glycine max]
Length = 206
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 116/121 (95%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGL+GE ++GFD++KVNLI
Sbjct: 25 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGFDSVKVNLI 84
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPGMTGYELLKKIKESSVFRE+PVVIMSSE+VLT+ID CLEEGAE++++KPVKLS
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLS 144
Query: 213 D 213
D
Sbjct: 145 D 145
>gi|388492124|gb|AFK34128.1| unknown [Lotus japonicus]
gi|388498306|gb|AFK37219.1| unknown [Lotus japonicus]
Length = 207
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/122 (81%), Positives = 119/122 (97%), Gaps = 1/122 (0%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS+VDRK+IERLL+ISSCKVT V+SGTRALQYLGLDGE+S++G D++KVNLI
Sbjct: 19 ELHVLAVDDSHVDRKVIERLLRISSCKVTVVDSGTRALQYLGLDGEKSSIGLDSVKVNLI 78
Query: 153 ITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+TDY+MPGMTGYELLKKIK ESSVFRE+PVV+MSSE++LT+IDSCLEEGAE++++KPVKL
Sbjct: 79 MTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKL 138
Query: 212 SD 213
SD
Sbjct: 139 SD 140
>gi|388507854|gb|AFK41993.1| unknown [Lotus japonicus]
Length = 209
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/128 (78%), Positives = 119/128 (92%), Gaps = 1/128 (0%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-SNVGFD 145
V E S ELHVLAVDDS VDRK+IERLL+ISSCKVT V+SGTRALQYLGLDGE+ S++GFD
Sbjct: 13 VLEDSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFD 72
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
+KVNLI+TDY+MPGMTGYELLKKIKESS FRE+PVV+MSSE++LT+ID CLEEGAE+++
Sbjct: 73 GVKVNLIMTDYSMPGMTGYELLKKIKESSAFREIPVVVMSSENILTRIDRCLEEGAEDFL 132
Query: 206 VKPVKLSD 213
+KPVKLSD
Sbjct: 133 LKPVKLSD 140
>gi|357477303|ref|XP_003608937.1| Two-component response regulator ARR5 [Medicago truncatula]
gi|355509992|gb|AES91134.1| Two-component response regulator ARR5 [Medicago truncatula]
Length = 214
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 114/121 (94%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDRK+IERLL+ISSCKVT VES RALQ+LGLDGE S+V FDA+KVNLI
Sbjct: 25 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVAFDAVKVNLI 84
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPGMTGYELLKKIKESSVFRE+PVVIMSSE+VLT+ID CLEEGAE++++KPVKLS
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLS 144
Query: 213 D 213
D
Sbjct: 145 D 145
>gi|351721065|ref|NP_001237197.1| uncharacterized protein LOC100527518 [Glycine max]
gi|255632528|gb|ACU16614.1| unknown [Glycine max]
Length = 211
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/122 (81%), Positives = 115/122 (94%), Gaps = 1/122 (0%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
EL VLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGLDG S++GFD++KVNLI
Sbjct: 25 ELQVLAVDDSLVDRKVIERLLRISSCKVTVVESGTRALQYLGLDGGNSSLGFDSVKVNLI 84
Query: 153 ITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+TDY+MPGMTGYELLKKIK ESSVFRE+PVVIMSSE+VLT+ID CLEEGAE++++KPVKL
Sbjct: 85 MTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKL 144
Query: 212 SD 213
SD
Sbjct: 145 SD 146
>gi|297819426|ref|XP_002877596.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
gi|297323434|gb|EFH53855.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/120 (78%), Positives = 111/120 (92%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS VDRK IERLL++SSCKVT V+S TRALQYLGLDGE S+VGF+ LK+NLI+
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENSSVGFEDLKINLIM 84
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAE++++KPVKL+D
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLAD 144
>gi|15242000|ref|NP_201097.1| two-component response regulator ARR6 [Arabidopsis thaliana]
gi|51316124|sp|Q9ZWS6.2|ARR6_ARATH RecName: Full=Two-component response regulator ARR6
gi|3953601|dbj|BAA34728.1| response regulator 6 [Arabidopsis thaliana]
gi|10177470|dbj|BAB10861.1| response regulator 6 [Arabidopsis thaliana]
gi|28466913|gb|AAO44065.1| At5g62920 [Arabidopsis thaliana]
gi|110735683|dbj|BAE99822.1| response regulator 6 [Arabidopsis thaliana]
gi|332010291|gb|AED97674.1| two-component response regulator ARR6 [Arabidopsis thaliana]
Length = 186
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 111/120 (92%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS+VDRK IERLL++SSCKVT V+S TRALQYLGLD E+ +VGF+ LKVNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLKKIKESS FREVPVVIMSSE++L +ID CLEEGAE++++KPVKLSD
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
>gi|296086487|emb|CBI32076.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/122 (79%), Positives = 111/122 (90%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+E HVLAVDDS VDRK+IERLL+ISSCKVTAV+SG RALQ+LGLD E+++ G D LKV+L
Sbjct: 28 EEAHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDEEKNSAGLDGLKVDL 87
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
IITDY MPGMTGYELLKKIKESS FRE PVVIMSSE++LT+ID CLEEGAE++IVKPVKL
Sbjct: 88 IITDYCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKL 147
Query: 212 SD 213
SD
Sbjct: 148 SD 149
>gi|147768948|emb|CAN69259.1| hypothetical protein VITISV_026384 [Vitis vinifera]
Length = 210
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/122 (79%), Positives = 111/122 (90%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+E HVLAVDDS VDRK+IERLL+ISSCKVTAV+SG RALQ+LGLD E+++ G D LKV+L
Sbjct: 17 EEAHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDEEKNSAGLDGLKVDL 76
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
IITDY MPGMTGYELLKKIKESS FRE PVVIMSSE++LT+ID CLEEGAE++IVKPVKL
Sbjct: 77 IITDYCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKL 136
Query: 212 SD 213
SD
Sbjct: 137 SD 138
>gi|356562781|ref|XP_003549647.1| PREDICTED: two-component response regulator ARR5-like isoform 2
[Glycine max]
Length = 213
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/128 (78%), Positives = 115/128 (89%), Gaps = 7/128 (5%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG--FDAL--- 147
ELHVLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGL+GE ++G FD L
Sbjct: 25 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGCLFDWLWLQ 84
Query: 148 --KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
KVNLI+TDY+MPGMTGYELLKKIKESSVFRE+PVVIMSSE+VLT+ID CLEEGAE+++
Sbjct: 85 SVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFL 144
Query: 206 VKPVKLSD 213
+KPVKLSD
Sbjct: 145 LKPVKLSD 152
>gi|3953599|dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana]
Length = 184
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 112/123 (91%), Gaps = 1/123 (0%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-SNVGFDALKVN 150
K LHVLAVDDS VDRK IERLL++SSCKVT V+S TRALQYLGLDGE S+VGF+ LK+N
Sbjct: 23 KLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKIN 82
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAE++++KPVK
Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142
Query: 211 LSD 213
L+D
Sbjct: 143 LAD 145
>gi|15228338|ref|NP_190393.1| two-component response regulator ARR5 [Arabidopsis thaliana]
gi|51316111|sp|Q9SB04.2|ARR5_ARATH RecName: Full=Two-component response regulator ARR5; AltName:
Full=Response reactor 2
gi|3273198|dbj|BAA31144.1| responce reactor2 [Arabidopsis thaliana]
gi|4678318|emb|CAB41129.1| responce reactor2 [Arabidopsis thaliana]
gi|18252911|gb|AAL62382.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|21389637|gb|AAM48017.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|110741132|dbj|BAE98659.1| response reactor 2 [Arabidopsis thaliana]
gi|332644847|gb|AEE78368.1| two-component response regulator ARR5 [Arabidopsis thaliana]
Length = 184
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 112/123 (91%), Gaps = 1/123 (0%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-SNVGFDALKVN 150
K LHVLAVDDS VDRK IERLL++SSCKVT V+S TRALQYLGLDGE S+VGF+ LK+N
Sbjct: 23 KLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKIN 82
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAE++++KPVK
Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142
Query: 211 LSD 213
L+D
Sbjct: 143 LAD 145
>gi|3323581|gb|AAC26635.1| two-component response regulator homolog [Arabidopsis thaliana]
Length = 184
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 112/123 (91%), Gaps = 1/123 (0%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-SNVGFDALKVN 150
K LHVLAVDDS VDRK IERLL++SSCKVT V+S TRALQYLGLDGE S+VGF+ LK+N
Sbjct: 23 KLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKIN 82
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAE++++KPVK
Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142
Query: 211 LSD 213
L+D
Sbjct: 143 LAD 145
>gi|449440724|ref|XP_004138134.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
gi|449477360|ref|XP_004155001.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
Length = 227
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/124 (78%), Positives = 112/124 (90%), Gaps = 1/124 (0%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD-ALKV 149
S +LHVLAVDDS+VDRK+IERLL+ SSC+VT VESG ALQYLGLDGE ++V F ALKV
Sbjct: 27 STQLHVLAVDDSFVDRKVIERLLKSSSCEVTVVESGRSALQYLGLDGETNSVQFSSALKV 86
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
NLIITDY+MP MTGYELLKKIKESS FRE+PVVIMSSE+++ +IDSCL+EGAEE+IVKPV
Sbjct: 87 NLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENIMARIDSCLKEGAEEFIVKPV 146
Query: 210 KLSD 213
KLSD
Sbjct: 147 KLSD 150
>gi|297797275|ref|XP_002866522.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312357|gb|EFH42781.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
Length = 186
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 109/120 (90%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS+VDRK IERLL++SSCKVT V+S TRALQYLGL E+ +VGF LKVNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLGVEEKSVGFQDLKVNLIM 84
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLKKIKESS FR+VPVVIMSSE++L +ID CLEEGAE++++KPVKLSD
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFRQVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
>gi|312283391|dbj|BAJ34561.1| unnamed protein product [Thellungiella halophila]
Length = 190
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 109/120 (90%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS+VDRK IERLL++SSCKVT V+S TRALQYLGLD ++ VG + LKVNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVDEKTVGLEDLKVNLIM 84
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLKKIKESS F+++PVV+MSSE++L +ID CLEEGAE++++KPVKLSD
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFKDIPVVVMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
>gi|297850294|ref|XP_002893028.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
gi|297338870|gb|EFH69287.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
Length = 209
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 108/121 (89%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGLDG + LKVNLI
Sbjct: 23 ELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLI 82
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPG+TGY+LLKKIKESS FREVPVVIMSSE++L +I+ CL+EGAEE+++KPVKL+
Sbjct: 83 VTDYSMPGLTGYDLLKKIKESSAFREVPVVIMSSENILPRIEECLKEGAEEFLLKPVKLA 142
Query: 213 D 213
D
Sbjct: 143 D 143
>gi|297842233|ref|XP_002888998.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
gi|297334839|gb|EFH65257.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 109/121 (90%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS+VDRK+IERLL+IS+CKVT VESGTRALQYLGLDG+ + G LKVNLI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDHGSSGLKDLKVNLI 76
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPG+TGYELLKKIKESS FRE+PVVIMSSE++ +I+ C+ EGAE++++KPVKL+
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSAFREIPVVIMSSENIQPRIEQCMIEGAEDFLLKPVKLA 136
Query: 213 D 213
D
Sbjct: 137 D 137
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 114/137 (83%), Gaps = 8/137 (5%)
Query: 78 GFPFWAMATVAEC-SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLD 136
GF F + C + E+HVLAVDDS VDRK+IERLL+I+SCKVTAV+SG RALQ+LGLD
Sbjct: 18 GFEF------SSCDNDEVHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGLD 71
Query: 137 GEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
E+S LKV+LIITDY MPGMTGYELLKKIKESS FRE+PVVIMSSE+V+ +ID C
Sbjct: 72 EEKS-TSIQGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRC 130
Query: 197 LEEGAEEYIVKPVKLSD 213
LEEGAE+++VKPVKLSD
Sbjct: 131 LEEGAEDFLVKPVKLSD 147
>gi|297849384|ref|XP_002892573.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
gi|297338415|gb|EFH68832.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 111/121 (91%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD E+++ FD LKV+LI
Sbjct: 30 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 89
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLKKIKESS FREVPVVIMSSE+VLT+ID CLEEGA+++++KPVKL+
Sbjct: 90 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 149
Query: 213 D 213
D
Sbjct: 150 D 150
>gi|15222035|ref|NP_177627.1| two-component response regulator ARR15 [Arabidopsis thaliana]
gi|51315904|sp|Q7G8V2.1|ARR15_ARATH RecName: Full=Two-component response regulator ARR15
gi|5882734|gb|AAD55287.1|AC008263_18 Similar to gb|AB008490 response regulator 7 (ARR7) from Arabidopsis
thaliana. EST gb|AA042183 comes from this gene
[Arabidopsis thaliana]
gi|11870065|gb|AAG40611.1|AF305720_1 response regulator 15 [Arabidopsis thaliana]
gi|12323888|gb|AAG51914.1|AC013258_8 putative response regulator (two component phosphotransfer
signaling); 70657-71777 [Arabidopsis thaliana]
gi|332197523|gb|AEE35644.1| two-component response regulator ARR15 [Arabidopsis thaliana]
Length = 206
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 108/121 (89%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS+VDRK+IERLL+IS+CKVT VESGTRALQYLGLDG+ + G LKVNLI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPG+TGYELLKKIKESS RE+PVVIMSSE++ +I+ C+ EGAEE+++KPVKL+
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLA 136
Query: 213 D 213
D
Sbjct: 137 D 137
>gi|15221927|ref|NP_173339.1| two-component response regulator ARR7 [Arabidopsis thaliana]
gi|51316125|sp|Q9ZWS7.1|ARR7_ARATH RecName: Full=Two-component response regulator ARR7
gi|8778291|gb|AAF79300.1|AC068602_23 F14D16.20 [Arabidopsis thaliana]
gi|3953603|dbj|BAA34729.1| response regulator 7 [Arabidopsis thaliana]
gi|88193788|gb|ABD42983.1| At1g19050 [Arabidopsis thaliana]
gi|332191674|gb|AEE29795.1| two-component response regulator ARR7 [Arabidopsis thaliana]
Length = 206
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 107/121 (88%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGLDG + LKVNLI
Sbjct: 23 ELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLI 82
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPG++GY+LLKKIKESS FREVPVVIMSSE++L +I CL+EGAEE+++KPVKL+
Sbjct: 83 VTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLA 142
Query: 213 D 213
D
Sbjct: 143 D 143
>gi|15218550|ref|NP_172517.1| two-component response regulator ARR4 [Arabidopsis thaliana]
gi|51315817|sp|O82798.1|ARR4_ARATH RecName: Full=Two-component response regulator ARR4; AltName:
Full=Response regulator 1
gi|5091539|gb|AAD39568.1|AC007067_8 T10O24.8 [Arabidopsis thaliana]
gi|3273196|dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gi|3323583|gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
gi|3953597|dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
gi|87116590|gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gi|110740750|dbj|BAE98474.1| putative response regulator 3 [Arabidopsis thaliana]
gi|332190462|gb|AEE28583.1| two-component response regulator ARR4 [Arabidopsis thaliana]
Length = 259
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 111/121 (91%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD E+++ FD LKV+LI
Sbjct: 33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 92
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLKKIKESS FREVPVVIMSSE+VLT+ID CLEEGA+++++KPVKL+
Sbjct: 93 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152
Query: 213 D 213
D
Sbjct: 153 D 153
>gi|449434875|ref|XP_004135221.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
gi|449478516|ref|XP_004155339.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
Length = 233
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Query: 72 FKETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQ 131
F R + E+HVLAVDDS VDR +IERLL++++C+VTAV+SG RALQ
Sbjct: 7 FSRRRRSDQLDGLDRFPTSDSEVHVLAVDDSLVDRTVIERLLRLTACRVTAVDSGIRALQ 66
Query: 132 YLGLDGE-QSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
YLGL E S VGFD LKV++IITDY MPGMTGYELLKKIKESS RE+PVVIMSSE+V+
Sbjct: 67 YLGLQDETNSQVGFDGLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVV 126
Query: 191 TQIDSCLEEGAEEYIVKPVKLSD 213
+ID CLEEGAE++IVKPVKLSD
Sbjct: 127 ARIDRCLEEGAEDFIVKPVKLSD 149
>gi|148608690|gb|ABQ95669.1| response regulator, partial [Malus x domestica]
Length = 209
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 107/120 (89%), Gaps = 1/120 (0%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN-VGFDALKVNLII 153
HVLAVDDS VDRK+IERLL+ISSC+VT V+SG RALQ+LGLD E+S+ GFD LKV+LII
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLII 60
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY MPGMTGYELLKKIKESS F+ PVVIMSSE+VL +ID CLEEGAE++IVKPVKL+D
Sbjct: 61 TDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLAD 120
>gi|148608687|gb|ABQ95668.1| response regulator, partial [Malus x domestica]
Length = 212
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 107/120 (89%), Gaps = 1/120 (0%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN-VGFDALKVNLII 153
HVLAVDDS VDRK+IERLL+ISSC+VT V+SG RALQ+LGLD E+S+ GFD LKV+LII
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLII 60
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY MPGMTGYELLKKIKESS F+ PVVIMSSE+VL +ID CLEEGAE++IVKPVKL+D
Sbjct: 61 TDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLAD 120
>gi|15218957|ref|NP_176202.1| two-component response regulator ARR3 [Arabidopsis thaliana]
gi|51316126|sp|Q9ZWS9.1|ARR3_ARATH RecName: Full=Two-component response regulator ARR3
gi|5080824|gb|AAD39333.1|AC007258_22 response regulator 3 [Arabidopsis thaliana]
gi|3953595|dbj|BAA34725.1| response regulator 3 [Arabidopsis thaliana]
gi|89111918|gb|ABD60731.1| At1g59940 [Arabidopsis thaliana]
gi|110737841|dbj|BAF00859.1| hypothetical protein [Arabidopsis thaliana]
gi|332195521|gb|AEE33642.1| two-component response regulator ARR3 [Arabidopsis thaliana]
Length = 231
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 112/123 (91%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S ++HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD +++ V FD LKV+
Sbjct: 30 SDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVD 89
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LIITDY MPGMTGYELLKKIKES+ F+EVPVVIMSSE+V+T+ID CLEEGAE++++KPVK
Sbjct: 90 LIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVK 149
Query: 211 LSD 213
L+D
Sbjct: 150 LAD 152
>gi|297837533|ref|XP_002886648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332489|gb|EFH62907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/123 (72%), Positives = 112/123 (91%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S ++HVLAVDDS +DR +IERLL+I+SCKVTAV+SG RAL++LGLD +++ V FD LKV+
Sbjct: 30 SDQVHVLAVDDSLLDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDKKAAVEFDRLKVD 89
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LIITDY MPGMTGYELLKKIKES+ F+EVPVVIMSSE+V+T+ID CLEEGAE++++KPVK
Sbjct: 90 LIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVITRIDRCLEEGAEDFLLKPVK 149
Query: 211 LSD 213
L+D
Sbjct: 150 LAD 152
>gi|309951226|emb|CBX43983.1| putative A-type response regulator 1b [Populus x canadensis]
Length = 257
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/127 (73%), Positives = 107/127 (84%), Gaps = 7/127 (5%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN-------VGFDA 146
+HVLAVDDS VDRK+IERLL+ISSCKVTAV+SG RAL+ LGL E+ GFD
Sbjct: 34 VHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSAGFDV 93
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
LKV+LIITDY MPGMTGYELLKKIKES+ FRE+PVVIMSSE+V+ +ID CLEEGAE++IV
Sbjct: 94 LKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEEGAEDFIV 153
Query: 207 KPVKLSD 213
KPVKLSD
Sbjct: 154 KPVKLSD 160
>gi|109631204|gb|ABG35778.1| SRR201 [Striga asiatica]
Length = 223
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/123 (72%), Positives = 110/123 (89%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
++EL VLAVDDS VDRK+IERLL+IS CK +VESGTRALQYLGLD E+++ GFD LKVN
Sbjct: 16 AQELCVLAVDDSLVDRKVIERLLKISRCKAISVESGTRALQYLGLDEEKNSSGFDDLKVN 75
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTG+ELL+KIK S+ + +PVVI+SSE+++T+ID CLEEGAEEY+VKPVK
Sbjct: 76 LIMTDYSMPGMTGFELLQKIKGSAKLKGIPVVILSSENIMTRIDRCLEEGAEEYLVKPVK 135
Query: 211 LSD 213
LSD
Sbjct: 136 LSD 138
>gi|441415442|dbj|BAM74645.1| type-A response regulator [Torenia fournieri]
Length = 213
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 114/131 (87%), Gaps = 5/131 (3%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE----QSNVG 143
++ ++E HVLAVDDS VDRK+IE+L +ISSCKVTAVESG+RALQYLGLDG+ ++VG
Sbjct: 9 SDLNQEFHVLAVDDSLVDRKVIEKLFKISSCKVTAVESGSRALQYLGLDGDLNDANNSVG 68
Query: 144 -FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
++ +K+NLI+TDY+MPGMTG+ELL+KIK S RE+PVV+MSSE+VL +ID CLEEGAE
Sbjct: 69 SYEGVKLNLIVTDYSMPGMTGFELLQKIKGSKALREIPVVVMSSENVLARIDRCLEEGAE 128
Query: 203 EYIVKPVKLSD 213
E++VKPVKLSD
Sbjct: 129 EFLVKPVKLSD 139
>gi|13173408|gb|AAK14395.1|AF339732_1 response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 106/126 (84%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
++ E HVLAVDDS +DRK+IERLL+ +SCKVT V+SG RAL++LGLD EQ D L
Sbjct: 29 SDVRSEAHVLAVDDSLIDRKVIERLLKTTSCKVTVVDSGMRALEFLGLDAEQRTSVVDGL 88
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
K++LIITDY MPGMTGYELLKKIKESS F+E PVVIMSSE+V+ +ID CLEEGAE++I+K
Sbjct: 89 KIDLIITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVIARIDRCLEEGAEDFILK 148
Query: 208 PVKLSD 213
PVKLSD
Sbjct: 149 PVKLSD 154
>gi|309951224|emb|CBX43982.1| putative A-type response regulator 1a [Populus x canadensis]
Length = 255
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 107/129 (82%), Gaps = 9/129 (6%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN---------VGF 144
+HVLAVDDS VDRK+IERLL+ISSCKVTAV+SG RAL+ LGL E+ GF
Sbjct: 34 VHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSSSAGF 93
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D LKV+LIITDY MPGMTGYELLKKIKES+ FRE+PVVIMSSE+V+ +ID CLEEGAE++
Sbjct: 94 DVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEEGAEDF 153
Query: 205 IVKPVKLSD 213
IVKPVKLSD
Sbjct: 154 IVKPVKLSD 162
>gi|370988685|dbj|BAL43556.1| type-A response regulator [Petunia x hybrida]
Length = 258
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 109/121 (90%), Gaps = 1/121 (0%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+HVLAVDDS VDR +IERLL+I+SCKVT V+SG RALQ+LGLD E+S+V D LKV+LI
Sbjct: 24 EVHVLAVDDSLVDRIVIERLLKITSCKVTTVDSGMRALQFLGLDEEESSVRIDGLKVDLI 83
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGY+LLKKIK SS FRE+PVVIMSSE+VLT+ID CLEEGAE++++KPVKL+
Sbjct: 84 ITDYCMPGMTGYDLLKKIKGSS-FREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLA 142
Query: 213 D 213
D
Sbjct: 143 D 143
>gi|224102663|ref|XP_002312769.1| type-a response regulator [Populus trichocarpa]
gi|222852589|gb|EEE90136.1| type-a response regulator [Populus trichocarpa]
Length = 258
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 107/129 (82%), Gaps = 9/129 (6%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN---------VGF 144
+HVLAVDDS VDRK+IERLL+ISSCKVTAV+SG RAL+ LGL E+ GF
Sbjct: 34 VHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSSSAGF 93
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D LKV+LIITDY MPGMTGYELLKKIKES+ FRE+PVVIMSSE+V+ +ID CLEEGAE++
Sbjct: 94 DVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEEGAEDF 153
Query: 205 IVKPVKLSD 213
IVKPVKLSD
Sbjct: 154 IVKPVKLSD 162
>gi|125658123|gb|ABN48988.1| type A response regulator RR1 [Phaseolus vulgaris]
Length = 227
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 111/129 (86%), Gaps = 4/129 (3%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD--- 145
E S E+HVLAVDDS VDRK+IERLL+IS+CKVTAV+SG RALQ+LGLD ++ D
Sbjct: 15 EDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFV 74
Query: 146 -ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
+LKV+LIITDY MP MTGYELLKKIKESS+FRE+PVVIMSSE++L +ID CLEEGAE++
Sbjct: 75 PSLKVDLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENILPRIDRCLEEGAEDF 134
Query: 205 IVKPVKLSD 213
IVKPVKLSD
Sbjct: 135 IVKPVKLSD 143
>gi|224102495|ref|XP_002312699.1| type-a response regulator [Populus trichocarpa]
gi|222852519|gb|EEE90066.1| type-a response regulator [Populus trichocarpa]
Length = 247
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 110/134 (82%), Gaps = 12/134 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSN--------- 141
+E+HVLAVDDS+VDRK+IERLL+ISSCKVTAV+SG AL+ LGL D E+ +
Sbjct: 32 EEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDEEEDKSSSSSSSS 91
Query: 142 --VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
GF+ LKV+LIITDY MPGMTGYELLKKIKESS FRE+PVVIMSSE+V+ +ID CLEE
Sbjct: 92 SSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLEE 151
Query: 200 GAEEYIVKPVKLSD 213
GAEE+I KPVKLSD
Sbjct: 152 GAEEFIAKPVKLSD 165
>gi|357486271|ref|XP_003613423.1| Two-component response regulator ARR3 [Medicago truncatula]
gi|355514758|gb|AES96381.1| Two-component response regulator ARR3 [Medicago truncatula]
Length = 237
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 113/135 (83%), Gaps = 4/135 (2%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
++ ++ S+E+HVLAVDDS VDRK+IERLL+IS+CKVTAV+SG RALQ+LGL E+
Sbjct: 5 SVVSIGVDSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETS 64
Query: 143 GFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
DA LKV+L+ITDY MPGMTGYELLKKIKES+ FR +PVVIMSSE++L +ID CLE
Sbjct: 65 ESDAFVPGLKVDLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRCLE 124
Query: 199 EGAEEYIVKPVKLSD 213
EGAE++IVKPVKLSD
Sbjct: 125 EGAEDFIVKPVKLSD 139
>gi|356497802|ref|XP_003517746.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 244
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 110/129 (85%), Gaps = 4/129 (3%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA-- 146
E S E+HVLAVDDS VDRK+IERLL+IS+CKVTAV+SG RALQ+LGLD ++ D
Sbjct: 15 EDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFV 74
Query: 147 --LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
LKV+LIITDY MP MTGYELLKKIKES++FRE+PVVIMSSE++L +ID CLEEGAE++
Sbjct: 75 PDLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDF 134
Query: 205 IVKPVKLSD 213
IVKPVKLSD
Sbjct: 135 IVKPVKLSD 143
>gi|356501005|ref|XP_003519320.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 240
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 110/129 (85%), Gaps = 4/129 (3%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA-- 146
E S E+HVLAVDDS VDRK+IERLL+IS+CKVTAV+SG RALQ+LGLD ++ D
Sbjct: 15 EDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFV 74
Query: 147 --LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
LKV+LIITDY MP MTGYELLKKIKES++FRE+PVVIMSSE++L +ID CLEEGAE++
Sbjct: 75 PDLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDF 134
Query: 205 IVKPVKLSD 213
IVKPVKLSD
Sbjct: 135 IVKPVKLSD 143
>gi|118489969|gb|ABK96781.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 248
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 13/135 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN---------- 141
+E+HVLAVDDS+VDRK+IERLL+ISSCKVTAV+SG AL+ LGL +
Sbjct: 32 EEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEEDKSSSSSSSS 91
Query: 142 ---VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
GF+ LKV+LIITDY MPGMTGYELLKKIKESS FRE+PVVIMSSE+V+ +ID CLE
Sbjct: 92 SSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLE 151
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+I KPVKLSD
Sbjct: 152 EGAEEFIAKPVKLSD 166
>gi|309951228|emb|CBX43984.1| putative A-type response regulator 2 [Populus x canadensis]
Length = 251
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 107/138 (77%), Gaps = 16/138 (11%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN---------- 141
+E+HVLAVDDS+VDRK+IERLL+ISSCKVTAV+SG AL+ LGL +
Sbjct: 32 EEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEEDKSSSSSSSS 91
Query: 142 ------VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
GF+ LKV+LIITDY MPGMTGYELLKKIKESS FRE+PVVIMSSE+V+ +ID
Sbjct: 92 SSFSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDR 151
Query: 196 CLEEGAEEYIVKPVKLSD 213
CLEEGAEE+I KPVKLSD
Sbjct: 152 CLEEGAEEFIAKPVKLSD 169
>gi|326518312|dbj|BAJ88185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 108/139 (77%), Gaps = 9/139 (6%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-- 139
A+A +AE HVLAVDDS +DRKLIERLL+ SS +VT V+SGT+ALQ+LGL E
Sbjct: 44 MAVAAIAEA--PFHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDAS 101
Query: 140 -SNVGFDAL----KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
S+V D L VNLIITDY MPGMTGY+LLKKIKESS FR++PVVIMSSE++ ++I+
Sbjct: 102 ISSVHADQLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRIN 161
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGA E+ +KPV+LSD
Sbjct: 162 RCLEEGANEFFLKPVRLSD 180
>gi|370988689|dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]
Length = 158
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 103/124 (83%), Gaps = 1/124 (0%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN-VGFDALKV 149
+ E HVLAVDD+ VDRKL+ERLL+ SSCKVT E+G RAL+YLGL G+Q + + KV
Sbjct: 20 ADEPHVLAVDDNLVDRKLVERLLKKSSCKVTTAENGLRALEYLGLGGDQEHSTNGNGSKV 79
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
N+IITDY MPGMTGYELLKKIKESS+ ++VPVVIMSSE++ T+ID C+EEGA+ +++KP+
Sbjct: 80 NMIITDYCMPGMTGYELLKKIKESSILKDVPVVIMSSENIPTRIDQCMEEGAQMFMLKPL 139
Query: 210 KLSD 213
K SD
Sbjct: 140 KHSD 143
>gi|18410485|ref|NP_567037.1| two-component response regulator ARR17 [Arabidopsis thaliana]
gi|51316089|sp|Q9FPR6.1|ARR17_ARATH RecName: Full=Two-component response regulator ARR17
gi|11870071|gb|AAG40613.1|AF305722_1 response regulator 17 [Arabidopsis thaliana]
gi|332645994|gb|AEE79515.1| two-component response regulator ARR17 [Arabidopsis thaliana]
Length = 153
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Query: 76 NRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL 135
N+G + + ++ +ELHVLAVDD+ +DRKL+ER+L+ISSCKVT E+G RAL+YLGL
Sbjct: 2 NKGCGSGSDSCLSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL 61
Query: 136 -DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
D +Q++ + +KVNLIITDY MPGMTG+ELLKK+KESS +EVPVVI+SSE++ T+I+
Sbjct: 62 GDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 121
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CL GA+ ++ KP+KLSD
Sbjct: 122 KCLASGAQMFMQKPLKLSD 140
>gi|370988687|dbj|BAL43557.1| type-A response regulator [Petunia x hybrida]
Length = 227
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 104/136 (76%), Gaps = 9/136 (6%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN----- 141
+A + HVLAVDDS +DRKLIERLL+ SSC+VT V+SG++AL++LGL + N
Sbjct: 3 MAAAESQFHVLAVDDSLIDRKLIERLLKTSSCQVTTVDSGSKALEFLGLQEHEQNKSNQP 62
Query: 142 -VGFD---ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL 197
V D ++NLIITDY MPGMTGY+LLKKIKESS R +PVVIMSSE+V ++I+ CL
Sbjct: 63 CVSLDNHQEAEINLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCL 122
Query: 198 EEGAEEYIVKPVKLSD 213
EEGAEE+ +KPV+LSD
Sbjct: 123 EEGAEEFFLKPVRLSD 138
>gi|383792043|dbj|BAM10424.1| Type-a response regulator protein, partial [Salix japonica]
Length = 94
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/94 (81%), Positives = 91/94 (96%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VLAVDDS+VDRK+IERLL+ISSCKVT VESG+RALQYLGLDGE+S+VGF+ LK++LI+TD
Sbjct: 1 VLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFNDLKIHLIMTD 60
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV 189
Y+MPGMTGYELLKKIKESS FRE+PVVIMSSE++
Sbjct: 61 YSMPGMTGYELLKKIKESSAFREIPVVIMSSENI 94
>gi|15230202|ref|NP_191263.1| two-component response regulator ARR9 [Arabidopsis thaliana]
gi|51315815|sp|O80366.1|ARR9_ARATH RecName: Full=Two-component response regulator ARR9; AltName:
Full=Response reactor 4
gi|3273202|dbj|BAA31146.1| responce reactor4 [Arabidopsis thaliana]
gi|6911874|emb|CAB72174.1| responce reactor 4 [Arabidopsis thaliana]
gi|19699061|gb|AAL90898.1| AT3g57040/F24I3_120 [Arabidopsis thaliana]
gi|22137112|gb|AAM91401.1| At3g57040/F24I3_120 [Arabidopsis thaliana]
gi|332646081|gb|AEE79602.1| two-component response regulator ARR9 [Arabidopsis thaliana]
Length = 234
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 104/140 (74%), Gaps = 12/140 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL----DGEQ 139
M AE + HVLAVDDS DRKLIERLLQ SSC+VT V+SG++AL++LGL D
Sbjct: 1 MGMAAES--QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSND 58
Query: 140 SN------VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
N V ++VNLIITDY MPGMTGY+LLKK+KESS FR++PVVIMSSE+V +I
Sbjct: 59 PNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 118
Query: 194 DSCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+L+D
Sbjct: 119 SRCLEEGAEEFFLKPVRLAD 138
>gi|441415444|dbj|BAM74646.1| type-A response regulator [Torenia fournieri]
Length = 141
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 105/126 (83%), Gaps = 5/126 (3%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD----AL 147
+++HVLAVDD+ +DR ++E+LL+ SSCKVT VE+G RAL+YLGL G+ N+ D A
Sbjct: 6 EQVHVLAVDDNLIDRTIVEKLLKNSSCKVTTVENGRRALEYLGL-GDDQNISSDDNAAAS 64
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
KVN+IITDY MPGMTGYELLKKIKESSV ++VPVVIMSSE+V T+I+ CLEEGAE +++K
Sbjct: 65 KVNMIITDYCMPGMTGYELLKKIKESSVMKDVPVVIMSSENVPTRINKCLEEGAEMFMLK 124
Query: 208 PVKLSD 213
P+K SD
Sbjct: 125 PLKHSD 130
>gi|297816962|ref|XP_002876364.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322202|gb|EFH52623.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 109/139 (78%), Gaps = 5/139 (3%)
Query: 76 NRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL 135
N G + + ++ +ELHVLAVDD+ +DRK +ER+L+ISSCKVT E+G RAL+YLGL
Sbjct: 2 NNGCGSGSESCLSSMEEELHVLAVDDNLIDRKFLERILKISSCKVTTAENGLRALEYLGL 61
Query: 136 -DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
D +Q+NV +KVNLIITDY MPGMTG+ELLKK+KESS +EVPVVI+SSE++ T+I+
Sbjct: 62 GDPQQTNV----MKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 117
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CL GA+ ++ KP+KLSD
Sbjct: 118 KCLASGAQMFMQKPLKLSD 136
>gi|224144996|ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
gi|222862364|gb|EEE99870.1| type-a response regulator [Populus trichocarpa]
Length = 154
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKV 149
++E HVLAVDDS VDRKL+ERLL+ SSCKVT E+G RAL+YLGL D +++++ + KV
Sbjct: 18 TEEPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKV 77
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
NLIITDY MPGMTGYELLKKIKESS+ +E+PVVIMSSE++ T+I+ CLEEGA+ +++KP+
Sbjct: 78 NLIITDYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIPTRINKCLEEGAQMFMLKPL 137
Query: 210 KLSD 213
K SD
Sbjct: 138 KQSD 141
>gi|351724253|ref|NP_001238075.1| uncharacterized protein LOC100527828 [Glycine max]
gi|255633320|gb|ACU17017.1| unknown [Glycine max]
Length = 222
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 106/127 (83%), Gaps = 4/127 (3%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ----SNVGFDA 146
S+E+HVLAVDDS VDRK+IE LL++ +CKVTAV+SG RALQ LGL EQ GF
Sbjct: 26 SEEVHVLAVDDSTVDRKVIEHLLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFVG 85
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
LKV+LIITDY MPGMTGYELLK+IKESS F+E PVVIMSSE+VL +ID CLEEGAE++IV
Sbjct: 86 LKVDLIITDYCMPGMTGYELLKRIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIV 145
Query: 207 KPVKLSD 213
KPVKLSD
Sbjct: 146 KPVKLSD 152
>gi|297824003|ref|XP_002879884.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
gi|297325723|gb|EFH56143.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 103/127 (81%), Gaps = 7/127 (5%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL---- 147
+ELHVLAVDD+ +DRKL+ERLL+ISSCKVT E+ RAL+YLGL G+Q N DAL
Sbjct: 26 EELHVLAVDDNLIDRKLVERLLKISSCKVTTAENAIRALEYLGL-GDQ-NQHIDALTCNV 83
Query: 148 -KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
KVNLIITDY MPGMTG+ELLKK+KESS RE+PVVIMSSE++ T+I+ CL GA+ ++
Sbjct: 84 MKVNLIITDYCMPGMTGFELLKKVKESSNLRELPVVIMSSENIPTRINKCLASGAQMFMQ 143
Query: 207 KPVKLSD 213
KP+KLSD
Sbjct: 144 KPLKLSD 150
>gi|309951240|emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
Length = 154
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKV 149
++E HVLAVDDS VDRKL+ERLL+ SSCKVT E+G RAL+YLGL D +++++ + KV
Sbjct: 18 TEEPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKV 77
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
NLIITDY MPGMTGYELLKKIKESS+ +++PVVIMSSE++ T+I+ CLEEGA+ +++KP+
Sbjct: 78 NLIITDYCMPGMTGYELLKKIKESSMLKKIPVVIMSSENIPTRINKCLEEGAQMFMLKPL 137
Query: 210 KLSD 213
K SD
Sbjct: 138 KQSD 141
>gi|224075846|ref|XP_002304794.1| type-a response regulator [Populus trichocarpa]
gi|224075848|ref|XP_002304795.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
gi|222842226|gb|EEE79773.1| type-a response regulator [Populus trichocarpa]
gi|222842227|gb|EEE79774.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
Length = 193
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 112/143 (78%), Gaps = 13/143 (9%)
Query: 84 MATVAECSKE--LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-- 139
MAT+A + E HVLAVDDS +DRKLIERLL+ SS +VTAV+SG++AL++LGL G+
Sbjct: 1 MATLATLATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQ 60
Query: 140 -----SNVGFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
S+V D +++N+IITDY MPGMTGY+LLKKIKES F+++PVVIMSSE+V
Sbjct: 61 RDSNPSSVSPDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVP 120
Query: 191 TQIDSCLEEGAEEYIVKPVKLSD 213
++I+ CLEEGAEE+ +KPV+LSD
Sbjct: 121 SRINRCLEEGAEEFFLKPVQLSD 143
>gi|109390454|gb|ABG33766.1| reponse regulator 6 [Musa acuminata]
Length = 156
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 102/136 (75%), Gaps = 7/136 (5%)
Query: 81 FWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ- 139
F MA A HVLAVDDS +DRKLIERLL+ SS +VT V+SGT+ALQ+LGL E
Sbjct: 21 FSPMAVAAIAEAPFHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDA 80
Query: 140 --SNVGFDAL----KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
S+V D L VNLIITDY MPGMTGY+LLKKIKESS FR++PVVIMSSE++ ++I
Sbjct: 81 SISSVHADQLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRI 140
Query: 194 DSCLEEGAEEYIVKPV 209
+ CLEEGA E+ +KPV
Sbjct: 141 NRCLEEGANEFFLKPV 156
>gi|224137712|ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
gi|222867255|gb|EEF04386.1| type-a response regulator [Populus trichocarpa]
Length = 227
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 105/139 (75%), Gaps = 9/139 (6%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
MA + + HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL + EQSN
Sbjct: 1 MAITGDSLSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNP 60
Query: 143 --------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
++VNLIITDY MPGMTGY+LLKK+KESS R +PVVIMSSE+V ++I
Sbjct: 61 DTPYVSPNNHQEMEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRIT 120
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+LSD
Sbjct: 121 RCLEEGAEEFFLKPVRLSD 139
>gi|357160996|ref|XP_003578944.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 225
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 105/135 (77%), Gaps = 8/135 (5%)
Query: 85 ATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF 144
A +AE + HVLAVDDS DRKLIERLL+ SS +VT V+SGT+AL++LG+ G+ + +
Sbjct: 3 AAIAET--QFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGTKALEFLGIHGQDTPISL 60
Query: 145 DA------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
A + VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE+V ++I+ CLE
Sbjct: 61 HADHLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRINRCLE 120
Query: 199 EGAEEYIVKPVKLSD 213
EGA E+ +KPV+LSD
Sbjct: 121 EGANEFFLKPVRLSD 135
>gi|309951232|emb|CBX43986.1| putative A-type response regulator 4 [Populus x canadensis]
Length = 193
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 112/143 (78%), Gaps = 13/143 (9%)
Query: 84 MATVAECSKE--LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-- 139
MAT+A + E HVLAVDDS +DRKLIERLL+ SS +VTAV+SG++AL++LGL G+
Sbjct: 1 MATLATQATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQ 60
Query: 140 -----SNVGFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
S+V D +++N+IITDY MPGMTGY+LLKKIKES F+++PVVIMSSE+V
Sbjct: 61 RDSNPSSVSPDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVP 120
Query: 191 TQIDSCLEEGAEEYIVKPVKLSD 213
++I+ CLEEGAEE+ +KPV+LSD
Sbjct: 121 SRINRCLEEGAEEFFLKPVQLSD 143
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 105/139 (75%), Gaps = 9/139 (6%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
MA + + HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL + EQSN
Sbjct: 1 MAITGDSLSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNP 60
Query: 143 --------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
++VNLIITDY MPGMTGY+LLKK+KESS R +PVVIMSSE+V ++I
Sbjct: 61 DTPFVSPNNHQEVEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRIT 120
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+LSD
Sbjct: 121 RCLEEGAEEFFLKPVRLSD 139
>gi|351724591|ref|NP_001236551.1| uncharacterized protein LOC100499827 [Glycine max]
gi|255626955|gb|ACU13822.1| unknown [Glycine max]
Length = 146
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 101/120 (84%), Gaps = 2/120 (1%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKVNLII 153
HVLAVDD+ +DRKL+E+LL+ SSCKVT E+G RAL+ LGL G Q+N+ + KVN+II
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNNMNGRS-KVNMII 76
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY MPGMTGYELLKKIKESSV +EVPVVIMSSE++ T+I+ CLEEGA+ +I+KP+K SD
Sbjct: 77 TDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSD 136
>gi|351725357|ref|NP_001235042.1| uncharacterized protein LOC100305926 [Glycine max]
gi|255627003|gb|ACU13846.1| unknown [Glycine max]
Length = 223
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 105/127 (82%), Gaps = 4/127 (3%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ----SNVGFDA 146
S+E+HVLAVDDS VDRK+IE L++ +CKVTAV+SG RALQ LGL EQ GF
Sbjct: 26 SEEVHVLAVDDSIVDRKVIEHSLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFGG 85
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
LKV+LIITDY MPGMTGYELLKKIKESS F+E PVVIMSSE+VL +ID CLEEGAE++IV
Sbjct: 86 LKVDLIITDYCMPGMTGYELLKKIKESSSFKETPVVIMSSENVLPRIDRCLEEGAEDFIV 145
Query: 207 KPVKLSD 213
KPVKLSD
Sbjct: 146 KPVKLSD 152
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 104/126 (82%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
A + E HVL VDDS +DRKLIE+LL+ISS +VTAV+ +ALQ+LGL+ ++ ++ D +
Sbjct: 9 AASTSEFHVLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDDEDDLNVDNI 68
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+VN+IITDY MPGMTGY+LL+++KESS +++PVVIMSSE+V ++I C+ EGAEE+++K
Sbjct: 69 QVNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRISRCMSEGAEEFLLK 128
Query: 208 PVKLSD 213
PV+LSD
Sbjct: 129 PVQLSD 134
>gi|297817018|ref|XP_002876392.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
gi|297322230|gb|EFH52651.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/131 (62%), Positives = 101/131 (77%), Gaps = 10/131 (7%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSN---------V 142
+ HVLAVDDS DRK IERLLQ SSC+VT V+SG++AL++LGL G SN V
Sbjct: 6 QFHVLAVDDSLFDRKYIERLLQKSSCQVTTVDSGSKALEFLGLRQGIDSNDPNALSKSPV 65
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
++VNLIITDY MPGMTGY+LLKK+KESS FR++PVVIMSSE+V +I CLEEGAE
Sbjct: 66 THQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 125
Query: 203 EYIVKPVKLSD 213
E+ +KPV+L+D
Sbjct: 126 EFFLKPVRLAD 136
>gi|224086847|ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
gi|222853959|gb|EEE91506.1| type-a response regulator [Populus trichocarpa]
Length = 233
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 104/141 (73%), Gaps = 11/141 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M + + HVLAVDDS +DRKLIERLL+ SS +VTAV+SG++AL++LGL E +
Sbjct: 1 MTITGDSHSQFHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDHSN 60
Query: 144 FDAL-----------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
D + +VNLIITDY MPGMTGY+LLKK+KESS R++PVVIMSSE+V ++
Sbjct: 61 PDTVPSVSPNDHREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSR 120
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I CLEEGAEE+ +KPV+L+D
Sbjct: 121 ITRCLEEGAEEFFLKPVRLAD 141
>gi|224053258|ref|XP_002297741.1| type-a response regulator [Populus trichocarpa]
gi|222844999|gb|EEE82546.1| type-a response regulator [Populus trichocarpa]
Length = 203
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/143 (56%), Positives = 110/143 (76%), Gaps = 11/143 (7%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-- 139
A+AT + HVLAVDD +DRKLIERLL+ SS +VTAV+SG++AL++LGL+GE
Sbjct: 5 MALATTMATETQFHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENEL 64
Query: 140 -----SNVGFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
++V D +++N+IITDY MPGMTGY+LLKKIKES F+++PVVIMSSE+V
Sbjct: 65 RDSKPASVSPDPYHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVP 124
Query: 191 TQIDSCLEEGAEEYIVKPVKLSD 213
++I+ CL+EGAEE+ +KPV+LSD
Sbjct: 125 SRINRCLKEGAEEFFLKPVQLSD 147
>gi|15227325|ref|NP_181663.1| two-component response regulator ARR8 [Arabidopsis thaliana]
gi|51315814|sp|O80365.1|ARR8_ARATH RecName: Full=Two-component response regulator ARR8; AltName:
Full=Response reactor 3
gi|3273200|dbj|BAA31145.1| responce reactor3 [Arabidopsis thaliana]
gi|3894192|gb|AAC78541.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|18491269|gb|AAL69459.1| At2g41310/F13H10.14 [Arabidopsis thaliana]
gi|110736644|dbj|BAF00286.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|330254865|gb|AEC09959.1| two-component response regulator ARR8 [Arabidopsis thaliana]
Length = 225
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 102/135 (75%), Gaps = 8/135 (5%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG--- 143
V E + HVLAVDDS DRK+IERLLQ SSC+VT V+SG++AL++LGL + ++
Sbjct: 2 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61
Query: 144 -----FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+++NLIITDY MPGMTGY+LLKK+KES+ FR +PVVIMSSE+V +I CLE
Sbjct: 62 TSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLE 121
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+ +KPVKL+D
Sbjct: 122 EGAEEFFLKPVKLAD 136
>gi|309951234|emb|CBX43987.1| putative A-type response regulator 5 [Populus x canadensis]
Length = 198
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/143 (56%), Positives = 110/143 (76%), Gaps = 11/143 (7%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-- 139
A+AT + HVLAVDD +DRKLIERLL+ SS +VTAV+SG++AL++LGL+GE
Sbjct: 5 MALATTMATETQFHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENEL 64
Query: 140 -----SNVGFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
++V D +++N+IITDY MPGMTGY+LLKKIKES F+++PVVIMSSE+V
Sbjct: 65 RDSEPASVSPDPYHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVP 124
Query: 191 TQIDSCLEEGAEEYIVKPVKLSD 213
++I+ CL+EGAEE+ +KPV+LSD
Sbjct: 125 SRINRCLKEGAEEFFLKPVQLSD 147
>gi|297824073|ref|XP_002879919.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
gi|297325758|gb|EFH56178.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 101/135 (74%), Gaps = 8/135 (5%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG--- 143
V E + HVLAVDDS DRK+IERLLQ SSC+VT V+SG++AL++LGL + +N
Sbjct: 2 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNNPNALS 61
Query: 144 -----FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+++NLIITDY MPGMTGY+LLKK+KES+ R +PVVIMSSE+V +I CLE
Sbjct: 62 TSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAALRSIPVVIMSSENVPARISRCLE 121
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+ +KPVKL+D
Sbjct: 122 EGAEEFFLKPVKLAD 136
>gi|225465893|ref|XP_002268352.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090344|emb|CBI40163.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 105/122 (86%), Gaps = 1/122 (0%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKVNL 151
+ HVLAVDD+ +DRKLIE+LL+ SS +VTAV+SG++AL++LGL + EQ N ++VNL
Sbjct: 8 QFHVLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQEMEVNL 67
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
IITDY+MPGMTGY+LL+KIKESS +++PVVIMSSE++ ++I+ CLEEGAE++ +KPV+L
Sbjct: 68 IITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQL 127
Query: 212 SD 213
SD
Sbjct: 128 SD 129
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 99/124 (79%), Gaps = 4/124 (3%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA----LKV 149
HVLAVDDS DRKLIERLL+ SS +VT V+SG++ALQ+LGL + S V + V
Sbjct: 45 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVPVHTDQLDVAV 104
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
NLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE++ ++I+ CLEEGA+E+ +KPV
Sbjct: 105 NLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPV 164
Query: 210 KLSD 213
+LSD
Sbjct: 165 RLSD 168
>gi|255559713|ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223540007|gb|EEF41585.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 155
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKVNLII 153
HVLAVDD+ +DRKL+E+LL+ S CKVT E+G RAL+YLGL D +++ + + KVNLII
Sbjct: 23 HVLAVDDNLIDRKLVEKLLKNSCCKVTTAENGLRALEYLGLGDDDRNCLENNVSKVNLII 82
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY MPGMTGYELLKKIKESS+ +EVPVVI+SSE++ T+I+ CLEEGA+ +++KP+KLSD
Sbjct: 83 TDYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPTRINKCLEEGAQMFMLKPLKLSD 142
>gi|225465891|ref|XP_002267932.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 146
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 107/131 (81%), Gaps = 3/131 (2%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
M AE + HVLAVDDS +DRKLIE+LL+ SS +VTAV+SG++AL++LGL + EQ N
Sbjct: 1 MGIAAET--QFHVLAVDDSLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNH 58
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
+VNLIITDY+MPGMTGY+LL+KIKESS +++PVVIMSSE++ ++I+ CLEEGAE
Sbjct: 59 HPQETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAE 118
Query: 203 EYIVKPVKLSD 213
++ +KPV+LSD
Sbjct: 119 DFFLKPVQLSD 129
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 106/139 (76%), Gaps = 11/139 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSN- 141
M AE + HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL + +++N
Sbjct: 1 MGMAAES--QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNP 58
Query: 142 -------VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
++VNL+ITDY MPGMTGY+LLKKIKESS R +PVVIMSSE+V ++I+
Sbjct: 59 NTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRIN 118
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+LSD
Sbjct: 119 RCLEEGAEEFFLKPVRLSD 137
>gi|359807455|ref|NP_001241393.1| uncharacterized protein LOC100778707 [Glycine max]
gi|255637322|gb|ACU18991.1| unknown [Glycine max]
Length = 146
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 96/119 (80%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDD+ +DRKL+E+LL+ SSCKVT E+G RAL+ LGL N KVN++IT
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNGRSKVNMVIT 77
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MPGMTGYELLKKIKESSV +EVPVVIMSSE++ T+I+ CLEEGA+ +I+KP+K SD
Sbjct: 78 DYCMPGMTGYELLKKIKESSVTKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSD 136
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 104/126 (82%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
A + E HVLAVDDS +DRKLIE+LL+ISS +VT V+S +ALQ+LGL+ ++ ++ D +
Sbjct: 9 AASTSEFHVLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDDEDDLNVDNI 68
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+VN+IITDY MPGMTGY+LL+++KESS +++PVVIMSSE+V ++ C+ EGA+E+++K
Sbjct: 69 QVNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRKSRCMSEGAQEFLLK 128
Query: 208 PVKLSD 213
PV+LSD
Sbjct: 129 PVQLSD 134
>gi|358248966|ref|NP_001240226.1| uncharacterized protein LOC100788079 [Glycine max]
gi|255641691|gb|ACU21117.1| unknown [Glycine max]
Length = 248
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 106/138 (76%), Gaps = 11/138 (7%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFD 145
+A + HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL + ++SN
Sbjct: 3 MAAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPSIP 62
Query: 146 AL----------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
++ +VNL+ITDY MPGMTGY+LLKKIKESS R +PVVIMSSE+V ++I+
Sbjct: 63 SVCPNNHQPQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINR 122
Query: 196 CLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+LSD
Sbjct: 123 CLEEGAEEFFLKPVRLSD 140
>gi|309951236|emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
Length = 230
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 103/141 (73%), Gaps = 11/141 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M + + HVLAVDDS +DRKLIERLL+ SS +VTAV+SG++AL++LGL E
Sbjct: 1 MTITGDSHSQFHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDQSN 60
Query: 144 FDAL-----------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
D + +VNLIITDY MPGMTGY+LLKK+KESS R++PVVIMSSE+V ++
Sbjct: 61 PDTVPSVCPNDHREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSR 120
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I CLEEGAEE+ +KPV+L+D
Sbjct: 121 ITRCLEEGAEEFFLKPVRLAD 141
>gi|225448707|ref|XP_002280746.1| PREDICTED: two-component response regulator ARR17 [Vitis vinifera]
Length = 153
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFD 145
V + E HVLAVDD+ +DRKLIE+LL+ SC+VT E+G RAL+YLGL D +Q++
Sbjct: 14 VMDYGDEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKAS 73
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
KVNLIITDY MPGMTGYELLK++K+SS+ +EVPVVIMSSE++ T+I+ CLEEGA+ ++
Sbjct: 74 VSKVNLIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFM 133
Query: 206 VKPVKLSD 213
+KP+K SD
Sbjct: 134 LKPLKQSD 141
>gi|224033189|gb|ACN35670.1| unknown [Zea mays]
gi|413915889|gb|AFW55821.1| response regulator 6 [Zea mays]
Length = 262
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV- 142
MA VA HVLAVDDS DRKLIERLL+ SS +VT V+SG++ALQ+LGL + S V
Sbjct: 60 MAAVA-TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVP 118
Query: 143 ----------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
+ VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE++ ++
Sbjct: 119 PVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR 178
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I+ CLEEGA+E+ +KPV+LSD
Sbjct: 179 INRCLEEGADEFFLKPVRLSD 199
>gi|109631202|gb|ABG35777.1| SRR217 [Striga asiatica]
Length = 220
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 106/135 (78%), Gaps = 8/135 (5%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQS--NVGF 144
+A + HVLAVDDS +DRKLIERLL+ SS +VT V+SG +AL++LG ++S + F
Sbjct: 3 MAAAEAQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGNKALEFLGWSKDESGNSNAF 62
Query: 145 DA------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
D+ ++VNL+ITDY MPGMTGYELLKK+KES+ R++PVVIMSSE+V ++I+ CLE
Sbjct: 63 DSPKNHQVVEVNLVITDYCMPGMTGYELLKKVKESTFLRDIPVVIMSSENVPSRINRCLE 122
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+ +KPV+LSD
Sbjct: 123 EGAEEFFLKPVRLSD 137
>gi|15226732|ref|NP_181599.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|51316112|sp|Q9SHC2.1|ARR16_ARATH RecName: Full=Two-component response regulator ARR16
gi|11870068|gb|AAG40612.1|AF305721_1 response regulator 16 [Arabidopsis thaliana]
gi|10443140|emb|CAC10396.1| putative type A response regulator [Arabidopsis thaliana]
gi|194708806|gb|ACF88487.1| At2g40670 [Arabidopsis thaliana]
gi|330254768|gb|AEC09862.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 164
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 102/127 (80%), Gaps = 7/127 (5%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL---- 147
+ELHVLAVDD+ +DRKL+ERLL+IS CKVT E+ RAL+YLGL G+Q N DAL
Sbjct: 27 EELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL-GDQ-NQHIDALTCNV 84
Query: 148 -KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
KV+LIITDY MPGMTG+ELLKK+KESS REVPVVIMSSE++ T+I+ CL GA+ ++
Sbjct: 85 MKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQ 144
Query: 207 KPVKLSD 213
KP+KL+D
Sbjct: 145 KPLKLAD 151
>gi|162459272|ref|NP_001104857.1| LOC541632 [Zea mays]
gi|12060388|dbj|BAB20581.1| response regulator 6 [Zea mays]
Length = 235
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV- 142
MA VA HVLAVDDS DRKLIERLL+ SS +VT V+SG++ALQ+LGL + S V
Sbjct: 33 MAAVA-TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVP 91
Query: 143 ----------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
+ VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE++ ++
Sbjct: 92 PVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR 151
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I+ CLEEGA+E+ +KPV+LSD
Sbjct: 152 INRCLEEGADEFFLKPVRLSD 172
>gi|297736479|emb|CBI25350.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFD 145
V + E HVLAVDD+ +DRKLIE+LL+ SC+VT E+G RAL+YLGL D +Q++
Sbjct: 2 VMDYGDEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKAS 61
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
KVNLIITDY MPGMTGYELLK++K+SS+ +EVPVVIMSSE++ T+I+ CLEEGA+ ++
Sbjct: 62 VSKVNLIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFM 121
Query: 206 VKPVKLSD 213
+KP+K SD
Sbjct: 122 LKPLKQSD 129
>gi|195622036|gb|ACG32848.1| RR10 - Corn type-A response regulator [Zea mays]
Length = 204
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV- 142
MA VA HVLAVDDS DRKLIERLL+ SS +VT V+SG++ALQ+LGL + S V
Sbjct: 1 MAAVA-TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVP 59
Query: 143 ----------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
+ VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE++ ++
Sbjct: 60 PVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR 119
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I+ CLEEGA+E+ +KPV+LSD
Sbjct: 120 INRCLEEGADEFFLKPVRLSD 140
>gi|194694438|gb|ACF81303.1| unknown [Zea mays]
Length = 235
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 103/141 (73%), Gaps = 12/141 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV- 142
MA VA HVLAVDDS DRKLIERLL+ SS +VT V+SG++ALQ+LGL + S V
Sbjct: 33 MAAVA-TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVP 91
Query: 143 ----------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
+ VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE++ ++
Sbjct: 92 PVHTHQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSR 151
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I+ CLEEGA+E+ +KPV+LSD
Sbjct: 152 INRCLEEGADEFFLKPVRLSD 172
>gi|449445057|ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527697|ref|XP_004170846.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 156
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 102/138 (73%), Gaps = 11/138 (7%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQS------ 140
VA S HVLAVDDS++DRKLIERLL+ SS VTAV+SGT+AL++LGL
Sbjct: 3 VAVESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSK 62
Query: 141 -----NVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
N + VNLIITDY+MPGM+GYELL+KIKES +++PVVIMSSE+V ++I+
Sbjct: 63 IAPDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINR 122
Query: 196 CLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+LSD
Sbjct: 123 CLEEGAEEFFLKPVQLSD 140
>gi|359807137|ref|NP_001241095.1| uncharacterized protein LOC100814494 [Glycine max]
gi|255647755|gb|ACU24338.1| unknown [Glycine max]
Length = 244
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 103/130 (79%), Gaps = 9/130 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV--------G 143
+ HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL + ++SN
Sbjct: 6 QFHVLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNPSTPYVCPNN 65
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
++VNL+ITDY MPGMTGY+LLKKIKESS R +PVVIMSSE+V ++I+ CLEEGAEE
Sbjct: 66 HQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEE 125
Query: 204 YIVKPVKLSD 213
+ +KPV+LSD
Sbjct: 126 FFLKPVRLSD 135
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 105/136 (77%), Gaps = 9/136 (6%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFD 145
+A + HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL + E+SN
Sbjct: 3 MAAAESQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTP 62
Query: 146 AL--------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL 197
++ +VNL+ITDY MPGMTGY+LLKKIKESS R +PVVIMSSE+V ++I+ CL
Sbjct: 63 SISPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCL 122
Query: 198 EEGAEEYIVKPVKLSD 213
EEGAEE+ +KPV+ SD
Sbjct: 123 EEGAEEFFLKPVRQSD 138
>gi|346703189|emb|CBX25288.1| hypothetical_protein [Oryza brachyantha]
Length = 200
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 5/125 (4%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG-EQSNVGFDA----LK 148
HVLAVDDS DRKLIERLL+ SS +VT V+SG++AL++LGL G E S + A
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHGHEDSPISVQADQQEAA 68
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE++ ++I+ CLEEGA+E+ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 128
Query: 209 VKLSD 213
V+LSD
Sbjct: 129 VRLSD 133
>gi|225465885|ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 220
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 110/139 (79%), Gaps = 11/139 (7%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQS 140
MAT A+ HVLAVDDS +DRKLIE+LL+ SS +VTAV+SG++AL++LGL + EQ
Sbjct: 1 MGMATEAQ----FHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQR 56
Query: 141 NVGFDAL------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
N+ +L +VNLIITDY MPGMTGY+LL+KIKES+ +++PVVIMSSE++ ++I+
Sbjct: 57 NLSPPSLCPSQEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRIN 116
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAE++ +KPV+LSD
Sbjct: 117 RCLEEGAEDFFLKPVQLSD 135
>gi|224146583|ref|XP_002326060.1| type-a response regulator [Populus trichocarpa]
gi|222862935|gb|EEF00442.1| type-a response regulator [Populus trichocarpa]
Length = 151
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 101/120 (84%), Gaps = 2/120 (1%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKVNLII 153
HVLAVDDS +DRK+IERLL S+C+VT E+G RAL+YLGL DG+ + D LKVN+II
Sbjct: 20 HVLAVDDSLIDRKVIERLLINSTCRVTTAENGKRALEYLGLADGQHPSHSQD-LKVNMII 78
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLK+IKES +E+PVV++SSE++ T+I+ C+E GA+E+++KP++LSD
Sbjct: 79 TDYSMPGMTGYELLKRIKESPTMKEIPVVVVSSENIPTRINQCMEGGAQEFLLKPLQLSD 138
>gi|296090338|emb|CBI40157.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 110/139 (79%), Gaps = 11/139 (7%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQS 140
MAT A+ HVLAVDDS +DRKLIE+LL+ SS +VTAV+SG++AL++LGL + EQ
Sbjct: 1 MGMATEAQ----FHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQR 56
Query: 141 NVGFDAL------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
N+ +L +VNLIITDY MPGMTGY+LL+KIKES+ +++PVVIMSSE++ ++I+
Sbjct: 57 NLSPPSLCPSQEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRIN 116
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAE++ +KPV+LSD
Sbjct: 117 RCLEEGAEDFFLKPVQLSD 135
>gi|388512609|gb|AFK44366.1| unknown [Lotus japonicus]
Length = 239
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 104/136 (76%), Gaps = 9/136 (6%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFD 145
+A + HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL + E+SN
Sbjct: 3 MAAAESQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTP 62
Query: 146 AL--------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL 197
++ +VNL+ITDY MPGMTGY+LLKKIKESS R +PVV MSSE+V ++I+ CL
Sbjct: 63 SISPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVTMSSENVPSRINRCL 122
Query: 198 EEGAEEYIVKPVKLSD 213
EEGAEE+ +KPV+ SD
Sbjct: 123 EEGAEEFFLKPVRQSD 138
>gi|255583668|ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223527676|gb|EEF29785.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 221
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 103/137 (75%), Gaps = 10/137 (7%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ------ 139
+VA SK HVLAVDDS +DRKLIE+LL+ISS +VT V+SG++ALQ+LGL +
Sbjct: 2 SVATESK-FHVLAVDDSLIDRKLIEKLLKISSYQVTTVDSGSKALQFLGLHEDDRSSPEI 60
Query: 140 ---SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
S ++VNLIITDY MPGMTGY+LLKKIKESS + +PVVIMSSE+V +I C
Sbjct: 61 PSVSPNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRC 120
Query: 197 LEEGAEEYIVKPVKLSD 213
LEEGAEE+ +KPV+LSD
Sbjct: 121 LEEGAEEFFLKPVQLSD 137
>gi|346703374|emb|CBX25471.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 104/135 (77%), Gaps = 7/135 (5%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
MA E HVLAVDDS DRKLIERLL+ SS +VT V+SG++AL++LGL D E S +
Sbjct: 1 MAVAIEAP--FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPI 58
Query: 143 GFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+ + VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSS+++ ++I+ CLE
Sbjct: 59 STQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLE 118
Query: 199 EGAEEYIVKPVKLSD 213
EGA+E+ +KPV+LSD
Sbjct: 119 EGADEFFLKPVRLSD 133
>gi|115484121|ref|NP_001065722.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|71273491|emb|CAI79413.1| Type A response regulator 9 [Oryza sativa Indica Group]
gi|87116388|dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa Japonica Group]
gi|108863989|gb|ABA91415.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|113644426|dbj|BAF27567.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|118790795|tpd|FAA00260.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215765046|dbj|BAG86743.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185231|gb|EEC67658.1| hypothetical protein OsI_35072 [Oryza sativa Indica Group]
gi|222615502|gb|EEE51634.1| hypothetical protein OsJ_32929 [Oryza sativa Japonica Group]
Length = 201
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 104/135 (77%), Gaps = 7/135 (5%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
MA E HVLAVDDS DRKLIERLL+ SS +VT V+SG++AL++LGL D E S +
Sbjct: 1 MAVAIEAP--FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPI 58
Query: 143 GFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+ + VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSS+++ ++I+ CLE
Sbjct: 59 STQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLE 118
Query: 199 EGAEEYIVKPVKLSD 213
EGA+E+ +KPV+LSD
Sbjct: 119 EGADEFFLKPVRLSD 133
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 104/135 (77%), Gaps = 7/135 (5%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
MA E HVLAVDDS DRKLIERLL+ SS +VT V+SG++AL++LGL D E S +
Sbjct: 1 MAVAIEAP--FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPI 58
Query: 143 GFDA----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+ + VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSS+++ ++I+ CLE
Sbjct: 59 STQSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLE 118
Query: 199 EGAEEYIVKPVKLSD 213
EGA+E+ +KPV+LSD
Sbjct: 119 EGADEFFLKPVRLSD 133
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 6/127 (4%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV------GFDA 146
+ HVLAVDDS +DRKLIE+LL+ SS +VT V+SG++AL++LGL N
Sbjct: 8 QFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNSHQE 67
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
++VNLIITDY MPGMTGY+LLKKIKESS R +PVVIMSSE+V ++I CLEEGAEE+ +
Sbjct: 68 VEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFL 127
Query: 207 KPVKLSD 213
KPV++SD
Sbjct: 128 KPVQISD 134
>gi|334184846|ref|NP_001189722.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|330254769|gb|AEC09863.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 165
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 102/128 (79%), Gaps = 8/128 (6%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL---- 147
+ELHVLAVDD+ +DRKL+ERLL+IS CKVT E+ RAL+YLGL G+Q N DAL
Sbjct: 27 EELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL-GDQ-NQHIDALTCNV 84
Query: 148 -KVNLIITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
KV+LIITDY MPGMTG+ELLKK+K ESS REVPVVIMSSE++ T+I+ CL GA+ ++
Sbjct: 85 MKVSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFM 144
Query: 206 VKPVKLSD 213
KP+KL+D
Sbjct: 145 QKPLKLAD 152
>gi|388506210|gb|AFK41171.1| unknown [Lotus japonicus]
Length = 174
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 101/132 (76%), Gaps = 2/132 (1%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN 141
MAT E + HVLAVDDS +DR LIERLL+ SS VTAV+S ++AL +LGL + ++
Sbjct: 1 MGMATPKET--QFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALNFLGLVEDMAS 58
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
+ VNLIITDY MPGMTGY+LL+KIKES +++PVVIMSSE+V ++I+ CLEEGA
Sbjct: 59 EIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGA 118
Query: 202 EEYIVKPVKLSD 213
EE+ +KPV+LSD
Sbjct: 119 EEFFLKPVQLSD 130
>gi|297739924|emb|CBI30106.3| unnamed protein product [Vitis vinifera]
Length = 157
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 6/127 (4%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV------GFDA 146
+ HVLAVDDS +DRKLIE+LL+ SS +VT V+SG++AL++LGL N
Sbjct: 8 QFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNSHQE 67
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
++VNLIITDY MPGMTGY+LLKKIKESS R +PVVIMSSE+V ++I CLEEGAEE+ +
Sbjct: 68 VEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFL 127
Query: 207 KPVKLSD 213
KPV++SD
Sbjct: 128 KPVQISD 134
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+E+HVLAVDDS++DRK++ERLL+ SS KVT V+S RAL+ LG+ G + V +A+K+NL
Sbjct: 6 REIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVG-SAPVVINAIKINL 64
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
IITDY MP MTGY+LLKK+KESS +E+PVVIMSSE+V +I C+ EGA+E+I+KP+++
Sbjct: 65 IITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRV 124
Query: 212 SD 213
+D
Sbjct: 125 AD 126
>gi|147837871|emb|CAN60564.1| hypothetical protein VITISV_013996 [Vitis vinifera]
Length = 154
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 102/129 (79%), Gaps = 2/129 (1%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFD 145
V + E HVLAVDD+ +DRKLIE+LL+ SC+VT E+G RAL+YLGL D +Q++
Sbjct: 14 VMDYGDEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKAS 73
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
KVNLIITDY MPGMTGYELLK+ K +SS+ +EVPVVIMSSE++ T+I+ CLEEGA+ +
Sbjct: 74 VSKVNLIITDYCMPGMTGYELLKRXKQQSSILKEVPVVIMSSENIPTRINKCLEEGAQMF 133
Query: 205 IVKPVKLSD 213
++KP+K SD
Sbjct: 134 MLKPLKQSD 142
>gi|3953605|dbj|BAA34730.1| response regulator 6 [Arabidopsis thaliana]
Length = 162
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 90/120 (75%), Gaps = 24/120 (20%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS+VDRK IERLL++SSCKVT V+S TRALQYLGLD E+ +VGF+ LKVNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLKKIK CLEEGAE++++KPVKLSD
Sbjct: 85 TDYSMPGMTGYELLKKIK------------------------CLEEGAEDFLLKPVKLSD 120
>gi|255544001|ref|XP_002513063.1| Two-component response regulator ARR8, putative [Ricinus communis]
gi|223548074|gb|EEF49566.1| Two-component response regulator ARR8, putative [Ricinus communis]
Length = 197
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 103/140 (73%), Gaps = 19/140 (13%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ------------- 139
+ HVLAVDDS +DRKLIERLL+ SS VTAV+SG++AL++LGL+ E+
Sbjct: 8 QFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSS 67
Query: 140 ------SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
+ L+VNLIITDY MPGMTGY+LL+KIKES F+++PVVIMSSE+V ++I
Sbjct: 68 PISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRI 127
Query: 194 DSCLEEGAEEYIVKPVKLSD 213
+ CLEEGAEE+ +KPV+LSD
Sbjct: 128 NRCLEEGAEEFFLKPVQLSD 147
>gi|33330868|gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD----ALKV 149
HVLAVDDS VDRKLIERLL+ S+ +VT V+SG +AL++LGL E+ + ++V
Sbjct: 10 FHVLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISGSNHQQVVEV 69
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
NLIITDY+MPGMTGY+LL+K+KESS +++PVVIMSSE++ ++I+ CLEEGA+++ +KPV
Sbjct: 70 NLIITDYSMPGMTGYDLLRKVKESSYLKDIPVVIMSSENIPSRINRCLEEGADDFFLKPV 129
Query: 210 KLSD 213
K SD
Sbjct: 130 KQSD 133
>gi|346703759|emb|CBX24427.1| hypothetical_protein [Oryza glaberrima]
Length = 207
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 101/131 (77%), Gaps = 11/131 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISS-------CKVTAVESGTRALQYLGL-DGEQSNVGFD 145
HVLAVDDS DRKLIERLL+ SS C VT V+SG++AL++LGL D E S +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHEDSPISAQ 68
Query: 146 A---LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
+ + VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSS+++ ++I+ CLEEGA+
Sbjct: 69 SDQQVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGAD 128
Query: 203 EYIVKPVKLSD 213
E+ +KPV+LSD
Sbjct: 129 EFFLKPVRLSD 139
>gi|109631210|gb|ABG35781.1| SRR197 [Striga asiatica]
Length = 211
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
+A + HV AVDDS +DRKLIERLL+ SS +VT V+SG++AL++LG + S
Sbjct: 3 MAAAEAQFHVFAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLG-ESCDSPKNQQE 61
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
++VNL+ITDY MPGMTGY+LLKK+KESS R++PVVI+SSE+V ++I+ CLEEG EE+ +
Sbjct: 62 IEVNLVITDYCMPGMTGYDLLKKMKESSFLRDIPVVILSSENVPSRINRCLEEGTEEFFL 121
Query: 207 KPVKLSD 213
KPV+LSD
Sbjct: 122 KPVRLSD 128
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 107/146 (73%), Gaps = 18/146 (12%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCK---------------VTAVESGTR 128
M AE + HVLAVDDS +DRKLIE+LL+ SS + VTAV+SG++
Sbjct: 1 MGIAAET--QFHVLAVDDSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSK 58
Query: 129 ALQYLGL-DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSE 187
AL++LGL + EQ N +VNLIITDY+MPGMTGY+LL+KIKESS +++PVVIMSSE
Sbjct: 59 ALEFLGLQEEEQRNHHPQETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSE 118
Query: 188 DVLTQIDSCLEEGAEEYIVKPVKLSD 213
++ ++I+ CLEEGAE++ +KPV+LSD
Sbjct: 119 NIPSRINRCLEEGAEDFFLKPVQLSD 144
>gi|449533717|ref|XP_004173818.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 255
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 103/145 (71%), Gaps = 11/145 (7%)
Query: 78 GFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG 137
G AM V++ + HVLAVDDS +DRKLIE+LL+ SS +VT V+SG++AL++LG D
Sbjct: 2 GSSVAAMGMVSDS--KFHVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDP 59
Query: 138 EQSNV---------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSED 188
S++ + VNL+ITDY MP MTGY+LLKKIK S+ R +PVVIMSSE+
Sbjct: 60 GNSSIPSVSSNHHHHHQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSEN 119
Query: 189 VLTQIDSCLEEGAEEYIVKPVKLSD 213
V +I+ CLEEGAEE+ +KPV+LSD
Sbjct: 120 VPARINRCLEEGAEEFFLKPVQLSD 144
>gi|449453183|ref|XP_004144338.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 261
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 103/145 (71%), Gaps = 11/145 (7%)
Query: 78 GFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG 137
G AM V++ + HVLAVDDS +DRKLIE+LL+ SS +VT V+SG++AL++LG D
Sbjct: 2 GSSVAAMGMVSDS--KFHVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDP 59
Query: 138 EQSNV---------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSED 188
S++ + VNL+ITDY MP MTGY+LLKKIK S+ R +PVVIMSSE+
Sbjct: 60 GNSSIPSVSSNHHHHHQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSEN 119
Query: 189 VLTQIDSCLEEGAEEYIVKPVKLSD 213
V +I+ CLEEGAEE+ +KPV+LSD
Sbjct: 120 VPARINRCLEEGAEEFFLKPVQLSD 144
>gi|108863990|gb|ABA91414.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
Length = 208
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 101/132 (76%), Gaps = 12/132 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISS-------CKVTAVESGTRALQYLGL-DGEQSNVGFD 145
HVLAVDDS DRKLIERLL+ SS C VT V+SG++AL++LGL D E S +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHEDSPISTQ 68
Query: 146 A----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
+ + VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSS+++ ++I+ CLEEGA
Sbjct: 69 SDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGA 128
Query: 202 EEYIVKPVKLSD 213
+E+ +KPV+LSD
Sbjct: 129 DEFFLKPVRLSD 140
>gi|225465887|ref|XP_002267375.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090339|emb|CBI40158.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 103/131 (78%), Gaps = 9/131 (6%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
M AE + HVLAVDDS VDRK IE+LL+ SS +VT V+S ++AL++LGL + EQ
Sbjct: 1 MGMAAES--QFHVLAVDDSLVDRKWIEKLLKTSSFQVTVVDSVSKALEFLGLQEAEQER- 57
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
KVNLIITDY+MPGMTGY+LL+KIKES+ +++PVVIMSSE++ ++I+ CLEEGAE
Sbjct: 58 -----KVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAE 112
Query: 203 EYIVKPVKLSD 213
++ +KPV+LSD
Sbjct: 113 DFFLKPVQLSD 123
>gi|357515051|ref|XP_003627814.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|92885116|gb|ABE87636.1| Response regulator receiver [Medicago truncatula]
gi|355521836|gb|AET02290.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|388516389|gb|AFK46256.1| unknown [Medicago truncatula]
Length = 177
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 103/139 (74%), Gaps = 12/139 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ---- 139
M AE + HVLAVDDS +DR LIERLL+ SS VT V+S ++AL++LGL ++
Sbjct: 1 MGMAAE--NQFHVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLVEDEMRTY 58
Query: 140 -----SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
S + D + VNLIITDY MPGMTGY+LL+KIKES F+++PVVIMSSE+V ++I+
Sbjct: 59 DTHVASEINQD-VDVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRIN 117
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+LSD
Sbjct: 118 RCLEEGAEEFFLKPVQLSD 136
>gi|449449356|ref|XP_004142431.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527272|ref|XP_004170636.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 173
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 103/143 (72%), Gaps = 13/143 (9%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M+ ++ HVLAVDDS VDRKLIERLL+ SS VT V+SG++AL+ LGL E++
Sbjct: 1 MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60
Query: 144 FDA-------------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
+ ++VNLIITDY MP MTG++LL+KIKES +++PVVIMSSE+V
Sbjct: 61 HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP 120
Query: 191 TQIDSCLEEGAEEYIVKPVKLSD 213
++I+ CLEEGAEE+++KPVKLSD
Sbjct: 121 SRINRCLEEGAEEFLLKPVKLSD 143
>gi|449437731|ref|XP_004136644.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 226
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 100/142 (70%), Gaps = 15/142 (10%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQS------ 140
V + HVLAVDDS +DRKLIERLL+ SS +VT V+SG++AL++LGL E
Sbjct: 2 VMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFKS 61
Query: 141 ---------NVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLT 191
N ++VNLIITDY MPGMTG++LLKK+KES+ R +PVVIMSSE+V +
Sbjct: 62 SSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENVPS 121
Query: 192 QIDSCLEEGAEEYIVKPVKLSD 213
+I+ CLEEGAEE+ +KPV+L D
Sbjct: 122 RINRCLEEGAEEFFLKPVRLCD 143
>gi|302804881|ref|XP_002984192.1| type A response regulator [Selaginella moellendorffii]
gi|300148041|gb|EFJ14702.1| type A response regulator [Selaginella moellendorffii]
Length = 278
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 100/127 (78%), Gaps = 5/127 (3%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQS---NVG--FDA 146
+E+HVLAVDDS++DRK++ERLL+ SS KVT V+S RAL+ LG+ G NV A
Sbjct: 6 REIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLA 65
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
+K+NLIITDY MP MTGY+LLKK+KESS +E+PVVIMSSE+V +I C+ EGA+E+I+
Sbjct: 66 IKINLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFIL 125
Query: 207 KPVKLSD 213
KP++++D
Sbjct: 126 KPLRVAD 132
>gi|346703278|emb|CBX25376.1| hypothetical_protein [Oryza brachyantha]
Length = 215
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 99/132 (75%), Gaps = 12/132 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCK-------VTAVESGTRALQYLGLDG-EQSNVGFD 145
HVLAVDDS DRKLIERLL+ SS + VT V+SG++AL++LGL E S +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQGFGFVGVVTTVDSGSKALEFLGLHAHEDSPISVQ 68
Query: 146 A----LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
A VNLIITDY MPGMTGY+LLKKIKESS R++PVVIMSSE++ ++I+ CLEEGA
Sbjct: 69 ADQQEAAVNLIITDYCMPGMTGYDLLKKIKESSCLRDIPVVIMSSENIPSRINRCLEEGA 128
Query: 202 EEYIVKPVKLSD 213
+E+ +KPV+LSD
Sbjct: 129 DEFFLKPVRLSD 140
>gi|33330866|gb|AAQ10676.1| type-A response regulator [Catharanthus roseus]
Length = 154
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 98/135 (72%), Gaps = 13/135 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL---- 147
KELHVLAVDD+ +DRK++E+LL SSCKVT E+G RAL+YLG G S AL
Sbjct: 7 KELHVLAVDDNIIDRKIVEKLLISSSCKVTTAENGIRALEYLGNLGVHSESQTPALHQDD 66
Query: 148 ---------KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
KVNLIITDY P MTGYELLKKIKESS+ +++PV++MSSE++ T+I CLE
Sbjct: 67 AIPTAAGDLKVNLIITDYCKPEMTGYELLKKIKESSILKDIPVIVMSSENIPTRIHKCLE 126
Query: 199 EGAEEYIVKPVKLSD 213
EGA+ +++KP+K SD
Sbjct: 127 EGAQMFMLKPLKHSD 141
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 99/140 (70%), Gaps = 15/140 (10%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
TV + HVLAVDDS VDRKLIE LL+ SS +VT V+SG++AL+ LGL + N D
Sbjct: 2 TVVDAESRFHVLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGL---RDNGAED 58
Query: 146 A------------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
A + VNLIITDY MPGMTGY+LLK++K SS +++PVVIMSSE+V +I
Sbjct: 59 ASSPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 118
Query: 194 DSCLEEGAEEYIVKPVKLSD 213
CLE+GAEE+ +KPVKL+D
Sbjct: 119 SRCLEDGAEEFFLKPVKLAD 138
>gi|309951230|emb|CBX43985.1| putative A-type response regulator 3 [Populus x canadensis]
Length = 242
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 103/137 (75%), Gaps = 13/137 (9%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG----- 143
E K HVLAVDDS++DRKL+ERLL++SS +VT V+SG +AL+YLGL NV
Sbjct: 40 EEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATSSS 99
Query: 144 -------FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
+ +KVNLI+TDY MPGM+GY+LLK++K S +++VPVV+MSSE++ ++I C
Sbjct: 100 SSSQSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVK-GSYWKDVPVVVMSSENIPSRIRMC 158
Query: 197 LEEGAEEYIVKPVKLSD 213
LEEGAEE+++KP++LSD
Sbjct: 159 LEEGAEEFLLKPLQLSD 175
>gi|224066817|ref|XP_002302230.1| type-a response regulator [Populus trichocarpa]
gi|222843956|gb|EEE81503.1| type-a response regulator [Populus trichocarpa]
Length = 243
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 103/137 (75%), Gaps = 13/137 (9%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG----- 143
E K HVLAVDDS++DRKL+ERLL++SS +VT V+SG +AL+YLGL NV
Sbjct: 41 EEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATSSS 100
Query: 144 -------FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
+ +KVNLI+TDY MPGM+GY+LLK++K S +++VPVV+MSSE++ ++I C
Sbjct: 101 SSSQSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVK-GSYWKDVPVVVMSSENIPSRIRMC 159
Query: 197 LEEGAEEYIVKPVKLSD 213
LEEGAEE+++KP++LSD
Sbjct: 160 LEEGAEEFLLKPLQLSD 176
>gi|357126832|ref|XP_003565091.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 213
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 99/141 (70%), Gaps = 11/141 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE----- 138
M VA HVLAVDDS +DRKLIE LL+ SS +VT V+SG++AL+ LGL E
Sbjct: 1 MTVVAAAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEGDSSS 60
Query: 139 ------QSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
S+ + VNLIITDY MPGMTGY+LL+++K SS +++PVVIMSSE+V +
Sbjct: 61 ASSSPSSSSPDHQEVDVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPAR 120
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I+ CLE+GAEE+ +KPVKL+D
Sbjct: 121 INRCLEDGAEEFFLKPVKLAD 141
>gi|357162610|ref|XP_003579464.1| PREDICTED: two-component response regulator ARR5-like [Brachypodium
distachyon]
Length = 163
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 99/135 (73%), Gaps = 8/135 (5%)
Query: 79 FPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE 138
P A A +ELHVLAVDDS VDR +I ++L+ S +VT VES TRAL+ LGL G
Sbjct: 28 VPVMAAAADEVVVQELHVLAVDDSVVDRAVIAKILRSSKYRVTTVESATRALELLGL-GL 86
Query: 139 QSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+NV N+IITDY MPGMTGYELLK++KESS +E+PVVIMSSE+V +I+ CLE
Sbjct: 87 ITNV-------NMIITDYWMPGMTGYELLKRVKESSELKEIPVVIMSSENVPNRINRCLE 139
Query: 199 EGAEEYIVKPVKLSD 213
EGAE++++KPV+ SD
Sbjct: 140 EGAEDFLLKPVRPSD 154
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 97/132 (73%), Gaps = 4/132 (3%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG----EQSN 141
TV + HVLAVDDS VDRKLIE LL+ SS +VT V+SG++AL+ LGL S+
Sbjct: 2 TVPDAESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSS 61
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
+ VNLIITDY MPGMTGY+LLK++K SS +++PVVIMSSE+V +I CL++GA
Sbjct: 62 PDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGA 121
Query: 202 EEYIVKPVKLSD 213
EE+ +KPVKL+D
Sbjct: 122 EEFFLKPVKLAD 133
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 97/132 (73%), Gaps = 4/132 (3%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG----EQSN 141
TV + HVLAVDDS VDRKLIE LL+ SS +VT V+SG++AL+ LGL S+
Sbjct: 2 TVPDAESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSS 61
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
+ VNLIITDY MPGMTGY+LLK++K SS +++PVVIMSSE+V +I CL++GA
Sbjct: 62 PDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGA 121
Query: 202 EEYIVKPVKLSD 213
EE+ +KPVKL+D
Sbjct: 122 EEFFLKPVKLAD 133
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 97/132 (73%), Gaps = 4/132 (3%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG----EQSN 141
TV + HVLAVDDS VDRKLIE LL+ SS +VT V+SG++AL+ LGL S+
Sbjct: 2 TVPDAESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSS 61
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
+ VNLIITDY MPGMTGY+LLK++K SS +++PVVIMSSE+V +I CL++GA
Sbjct: 62 PDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGA 121
Query: 202 EEYIVKPVKLSD 213
EE+ +KPVKL+D
Sbjct: 122 EEFFLKPVKLAD 133
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 99/137 (72%), Gaps = 9/137 (6%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE------- 138
TV + HVLAVDDS +DRKLIE LL+ SS +VT V+SG++AL+ LGL E
Sbjct: 2 TVVDAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSS 61
Query: 139 --QSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
S+ + VNLIITDY MPGMTGY+LLK++K SS +++PVVIMSSE+V +I+ C
Sbjct: 62 PSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRC 121
Query: 197 LEEGAEEYIVKPVKLSD 213
LE+GAEE+ +KPVKL+D
Sbjct: 122 LEDGAEEFFLKPVKLAD 138
>gi|356541574|ref|XP_003539249.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 187
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 103/139 (74%), Gaps = 11/139 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN-- 141
M AE + HVLAVDDS +DR LIERLL+ SS VTAV+SG++AL++LGL E+ N
Sbjct: 1 MGMAAEA--QFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEKRNEE 58
Query: 142 ----VGFDA---LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
+ ++ ++VNLIITDY MP MTGY+LL+KIKES +++PVVIMSSE+V +I+
Sbjct: 59 PPPCIALESHQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPARIN 118
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGA+E+ +KPV+ SD
Sbjct: 119 RCLEEGADEFFLKPVQQSD 137
>gi|7594516|emb|CAB88041.1| response regulator-like protein [Arabidopsis thaliana]
Length = 122
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
Query: 76 NRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL 135
N+G + + ++ +ELHVLAVDD+ +DRKL+ER+L+ISSCKVT E+G RAL+YLGL
Sbjct: 2 NKGCGSGSDSCLSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL 61
Query: 136 -DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
D +Q++ + +KVNLIITDY MPGMTG+ELLKK+KESS +EVPVVI+SSE++ T+I+
Sbjct: 62 GDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 121
>gi|255647513|gb|ACU24220.1| unknown [Glycine max]
Length = 191
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 104/139 (74%), Gaps = 11/139 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSN- 141
M AE + HVLAVDDS +DR LIERLL+ SS VTA++SG++AL++LGL + EQ N
Sbjct: 1 MGMAAEA--QFHVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLAEDEQRNK 58
Query: 142 ----VGFDA---LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
+ ++ ++VNLIITDY MP MTGY+LLKKIKES +++PVVIMSSE+V +I+
Sbjct: 59 EPPSIALESHQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARIN 118
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLE+GA+E+ +KPV+ SD
Sbjct: 119 RCLEDGADEFFLKPVQQSD 137
>gi|109631208|gb|ABG35780.1| SRR198 [Striga asiatica]
Length = 238
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 103/139 (74%), Gaps = 10/139 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLD-GEQSNV 142
M E S + HVLAVDDS +DRKLIE+LL+ SS +VT V+SG++AL++LG E+SN
Sbjct: 1 MGMATEDS-QFHVLAVDDSLIDRKLIEKLLKNSSFQVTTVDSGSKALEFLGWHRDERSNS 59
Query: 143 G--------FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
++VNL+ITDY MPGMTGY+LLKK+KESS + +PVVI+SSE+V ++I
Sbjct: 60 KGTSVSPKTHQEVEVNLVITDYCMPGMTGYDLLKKMKESSSLKNIPVVIVSSENVPSRIT 119
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KP+KL+D
Sbjct: 120 RCLEEGAEEFFLKPMKLTD 138
>gi|388511259|gb|AFK43691.1| unknown [Lotus japonicus]
Length = 224
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 102/134 (76%), Gaps = 15/134 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN------------ 141
HVLAVDDS +DRKL+ERLL+ SSCKVT V+SG +AL+YLGL + N
Sbjct: 22 FHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISP 81
Query: 142 --VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
V + +KVNLI+TD+ MPGM+GY+LLK++K SS +++VPVV+MSSE+V ++I CLEE
Sbjct: 82 QQVEQEGIKVNLIMTDFCMPGMSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMCLEE 140
Query: 200 GAEEYIVKPVKLSD 213
GAE++++KP++LSD
Sbjct: 141 GAEKFLLKPLQLSD 154
>gi|109631206|gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 100/126 (79%), Gaps = 6/126 (4%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALK---- 148
HVLAVDDS +DRKLIERLL+ SS +VT V+SG +AL++LGL D + +N +
Sbjct: 10 FHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSKSVSQPRSNH 69
Query: 149 -VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
V+LIITDY+MP +TGY+LL+KIKES + +++PVVIMSSE++ ++I+SCLE+GA+E+ VK
Sbjct: 70 IVDLIITDYSMPALTGYDLLRKIKESEILKDIPVVIMSSENIPSRINSCLEQGAQEFFVK 129
Query: 208 PVKLSD 213
PV+ SD
Sbjct: 130 PVQQSD 135
>gi|356515915|ref|XP_003526642.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 232
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 101/137 (73%), Gaps = 18/137 (13%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF--------- 144
HVLAVDDS +DRKL+ERLL+ SSCKVT V+SG +AL+YLGL E +
Sbjct: 23 FHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTTLESESSH 82
Query: 145 --------DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
+ +KVNLI+TDY MPGM+GY+LLK++K SS +++VPVVIMSSE+V ++I C
Sbjct: 83 PPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVIMSSENVPSRISMC 141
Query: 197 LEEGAEEYIVKPVKLSD 213
LEEGA+E+++KP++LSD
Sbjct: 142 LEEGAQEFLLKPLQLSD 158
>gi|168029974|ref|XP_001767499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681205|gb|EDQ67634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK-V 149
+ E HVLAVDDS +DRK+IERLL+ SS KVT V S RAL+YLGL S+ G ++ V
Sbjct: 16 NSEYHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSSSGKPNVRAV 75
Query: 150 NLIITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
NLI+TDY MPGMTGY+LLK +K E+S F+E+PV++MSSE+ +I SCL EGAE++++KP
Sbjct: 76 NLIMTDYCMPGMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKSCLAEGAEDFLIKP 135
Query: 209 VKLSD 213
V+L D
Sbjct: 136 VQLED 140
>gi|356555024|ref|XP_003545839.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 98/139 (70%), Gaps = 12/139 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
MA E + HVLAVDDS +DR LIERLL+ SS VT V+S T+AL++LGL E
Sbjct: 1 MAMTVEA--QFHVLAVDDSIIDRMLIERLLKTSSFHVTTVDSATKALKFLGL-VEDELRT 57
Query: 144 FDA---------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
FD + +NLIITDY MPGMTGY+LL+KIKES + +PVVIMSSE+V ++I+
Sbjct: 58 FDTTVASEIHQDVDINLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRIN 117
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+ +D
Sbjct: 118 RCLEEGAEEFFLKPVQQAD 136
>gi|388492888|gb|AFK34510.1| unknown [Medicago truncatula]
Length = 167
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDAL---- 147
+ HVLAVDDS +DR LIERLL+ SS VT V+SGT+AL++LGL + E N ++
Sbjct: 3 QFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAET 62
Query: 148 ----KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
+VNLIITDY MPGMTGY+LL+KIKES+ +++PVVI SSE+V ++I+ CLEEGAEE
Sbjct: 63 DQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVITSSENVPSRINRCLEEGAEE 122
Query: 204 YIVKPVKLSD 213
+ +KPV+ SD
Sbjct: 123 FFLKPVQQSD 132
>gi|302781008|ref|XP_002972278.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
gi|300159745|gb|EFJ26364.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
Length = 293
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 100/141 (70%), Gaps = 19/141 (13%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQS---NVG----- 143
+E+HVLAVDDS++DRK++ERLL+ SS KVT V+S RAL+ LG+ G NV
Sbjct: 6 REIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLV 65
Query: 144 -----------FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
A+K+NLIITDY MP MTGY+LLKK+KESS +E+PVVIMSSE+V +
Sbjct: 66 HFLCFLWLLLLLQAIKINLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAER 125
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I C+ EGA+E+I+KP++++D
Sbjct: 126 ITMCMAEGAKEFILKPLRVAD 146
>gi|116788845|gb|ABK25022.1| unknown [Picea sitchensis]
Length = 208
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 95/122 (77%), Gaps = 1/122 (0%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN-VGFDALKVNL 151
E+HVLAVDD ++RK+IE+LL+ + KVT V+S RAL+ LG EQS +A KVN+
Sbjct: 32 EMHVLAVDDCLIERKVIEKLLKTNFFKVTTVDSAERALEVLGFHEEQSTCAASNAFKVNM 91
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
IITDY MPGMTGY+LLKK++E+ +E+PVVI+SSE+V +I SCL GA+++I+KP+KL
Sbjct: 92 IITDYCMPGMTGYDLLKKVQETKCLKEIPVVIISSENVPQRITSCLAGGAKDFIIKPLKL 151
Query: 212 SD 213
+D
Sbjct: 152 AD 153
>gi|326531500|dbj|BAJ97754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 92/121 (76%), Gaps = 8/121 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDR +I ++L+ S +VT V+S TRAL+ LGL G VN+I
Sbjct: 52 ELHVLAVDDSVVDRAVIAKILRSSKYRVTTVDSATRALELLGL-------GL-ITDVNMI 103
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLK++KESS RE+PVVIMSSE+V +I CLEEGAE++++KPV+ S
Sbjct: 104 ITDYWMPGMTGYELLKRVKESSELREIPVVIMSSENVPNRITRCLEEGAEDFLLKPVRPS 163
Query: 213 D 213
D
Sbjct: 164 D 164
>gi|255646817|gb|ACU23880.1| unknown [Glycine max]
Length = 235
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 18/135 (13%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF----------- 144
VLAVDDS +DRKL+ERLL+ SSCKVT V+SG +AL+YLGL E +
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTPLESESSHPP 85
Query: 145 ------DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+ +KVNLI+TDY MPGM+GY+LLK++K SS +++VPVVIMSSE+V ++I CLE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVIMSSENVPSRISMCLE 144
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+++KP++LSD
Sbjct: 145 EGAEEFLLKPLQLSD 159
>gi|302755905|ref|XP_002961376.1| type A response regulator [Selaginella moellendorffii]
gi|300170035|gb|EFJ36636.1| type A response regulator [Selaginella moellendorffii]
Length = 220
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 99/126 (78%), Gaps = 5/126 (3%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGL-DGEQSNVGF--DAL 147
++HVLAVDDS VDR +IERLL+ SS KVTAV+S RAL+ LG+ DG+ S + +
Sbjct: 50 QIHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGI 109
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
++++IITDY MP MTGY+LLK++K S +E+PVVIMSSE+V +I+SC EEGAE++I+K
Sbjct: 110 QISMIITDYCMPHMTGYDLLKRVKGVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIK 169
Query: 208 PVKLSD 213
PVKL+D
Sbjct: 170 PVKLAD 175
>gi|356509391|ref|XP_003523433.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 235
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 101/135 (74%), Gaps = 18/135 (13%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN-------------- 141
VLAVDDS +DRKL+ERLL+ SSCKVT V+SG +AL+YLGL E +
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTSLESESSHPP 85
Query: 142 ---VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+ + +KVNLI+TDY MPGM+GY+LLK++K SS +++VPVVIMSSE+V ++I CLE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVIMSSENVPSRISMCLE 144
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+++KP++LSD
Sbjct: 145 EGAEEFLLKPLQLSD 159
>gi|302798272|ref|XP_002980896.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
gi|300151435|gb|EFJ18081.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
Length = 222
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 99/126 (78%), Gaps = 5/126 (3%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGL-DGEQSNVGF--DAL 147
++HVLAVDDS VDR +IERLL+ SS KVTAV+S RAL+ LG+ DG+ S + +
Sbjct: 52 QIHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGI 111
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
++++IITDY MP MTGY+LLK++K S +E+PVVIMSSE+V +I+SC EEGAE++I+K
Sbjct: 112 QISMIITDYCMPHMTGYDLLKRVKGVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIK 171
Query: 208 PVKLSD 213
PVKL+D
Sbjct: 172 PVKLAD 177
>gi|363807796|ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycine max]
gi|255633210|gb|ACU16961.1| unknown [Glycine max]
Length = 172
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 103/139 (74%), Gaps = 11/139 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSN- 141
M AE + VLAVDDS +DR LIERLL+ SS VTA++SG++AL++LGL + EQ N
Sbjct: 1 MGMAAEA--QFQVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLVEDEQRNK 58
Query: 142 ----VGFDA---LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
+ ++ ++VNLIITDY MP MTGY+LLKKIKES +++PVVIMSSE+V +I+
Sbjct: 59 EPPSIALESHQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARIN 118
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLE+GA+E+ +KPV+ SD
Sbjct: 119 RCLEDGADEFFLKPVQQSD 137
>gi|359828772|gb|AEV76988.1| type A response regulator 4, partial [Triticum aestivum]
Length = 203
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 96/138 (69%), Gaps = 10/138 (7%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE------- 138
TV + HVLAVDDS +DRKLIE LL+ SS +VT V+SG++AL+ LG E
Sbjct: 2 TVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGFRDEGDDSSSP 61
Query: 139 ---QSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
+ + VNLIITDY MPGMTGY+LL+++K SS +++PVVIMSSE+V +I
Sbjct: 62 PSSSAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISR 121
Query: 196 CLEEGAEEYIVKPVKLSD 213
CLE+GAEE+ +KPVKL+D
Sbjct: 122 CLEDGAEEFFLKPVKLAD 139
>gi|388505720|gb|AFK40926.1| unknown [Lotus japonicus]
Length = 224
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 101/134 (75%), Gaps = 15/134 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN------------ 141
HVLAVDDS +DRKL+ERLL+ SSCKVT V+SG +AL+YLGL + N
Sbjct: 22 FHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISP 81
Query: 142 --VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
V + +KVNLI+TD+ MPG +GY+LLK++K SS +++VPVV+MSSE+V ++I CLEE
Sbjct: 82 QQVEQEGIKVNLIMTDFCMPGKSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMCLEE 140
Query: 200 GAEEYIVKPVKLSD 213
GAE++++KP++LSD
Sbjct: 141 GAEKFLLKPLQLSD 154
>gi|356546360|ref|XP_003541594.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 98/139 (70%), Gaps = 12/139 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
MA E + HVLAVDDS +DR LIERLL+ SS VT ++S T+AL++LGL E
Sbjct: 1 MAMTVEA--QFHVLAVDDSIIDRMLIERLLKTSSFHVTTLDSATKALKFLGL-VEDELRT 57
Query: 144 FDA---------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
FD + VNLIITDY MPG+TGY+LL+KIKES + +PVVIMSSE+V ++I+
Sbjct: 58 FDTTVASEIHQDVDVNLIITDYCMPGLTGYDLLRKIKESKSLKNIPVVIMSSENVPSRIN 117
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+ +D
Sbjct: 118 RCLEEGAEEFFLKPVQQAD 136
>gi|359495010|ref|XP_003634897.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR9-like [Vitis vinifera]
Length = 141
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 102/132 (77%), Gaps = 10/132 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
M AE + HVLAVDDS +DRK IE+LL+ SS +VT ++S ++AL++LG+ + EQ
Sbjct: 1 MGMAAES--QFHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGVQEAEQER- 57
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
KVNLIITDY+MPGMTGY+LL+KIKES+ +++PVVIMSSE++ ++I CLEEGAE
Sbjct: 58 -----KVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAE 112
Query: 203 EYIVK-PVKLSD 213
++ +K PV+LSD
Sbjct: 113 DFFLKLPVQLSD 124
>gi|168001998|ref|XP_001753701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695108|gb|EDQ81453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 95/123 (77%), Gaps = 2/123 (1%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE-QSNVGFDALKVNL 151
E HVLAVDDS +DRK+IERLL+ SS KVT V S RAL+YLGL ++V + + VNL
Sbjct: 6 EYHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSTSVKANKVTVNL 65
Query: 152 IITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
I+TDY MP MTGY+LLK +K E+S F+E+PV++MSSE+ +I CLEEGA+E+++KPV+
Sbjct: 66 IMTDYCMPEMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKRCLEEGAKEFLIKPVQ 125
Query: 211 LSD 213
+ D
Sbjct: 126 IED 128
>gi|217075290|gb|ACJ86005.1| unknown [Medicago truncatula]
gi|388493820|gb|AFK34976.1| unknown [Medicago truncatula]
Length = 235
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 101/137 (73%), Gaps = 19/137 (13%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLD-GEQSNVGF--------- 144
HVLAVDDS +DR L+ERLL+ SSCKVT V+SG +AL+YLGL+ E S+
Sbjct: 23 HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILESSSPS 82
Query: 145 --------DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
+ KVNLI+TDY MPGM+GY+LLK++K SS +++VPVV+MSSE+V ++I C
Sbjct: 83 LPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMC 141
Query: 197 LEEGAEEYIVKPVKLSD 213
LEEGAEE+++KP++LSD
Sbjct: 142 LEEGAEEFLMKPLQLSD 158
>gi|115461262|ref|NP_001054231.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|32488053|emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa Japonica Group]
gi|70663953|emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa Japonica Group]
gi|71273485|emb|CAI79410.1| Type A response regulator 6 [Oryza sativa Indica Group]
gi|87116376|dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa Japonica Group]
gi|113565802|dbj|BAF16145.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|118790854|tpd|FAA00267.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125592032|gb|EAZ32382.1| hypothetical protein OsJ_16592 [Oryza sativa Japonica Group]
gi|215765394|dbj|BAG87091.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 93/125 (74%), Gaps = 8/125 (6%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E E+HVLAVDDS VDR +I ++L+ S +VT VES TRAL+ L L G NV
Sbjct: 45 EAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL-GLVPNV------ 97
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
N+IITDY MPGMTGYELLK++KESS +E+PVVIMSSE+V +I CLEEGAE++++KP
Sbjct: 98 -NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKP 156
Query: 209 VKLSD 213
V+ SD
Sbjct: 157 VRPSD 161
>gi|90265238|emb|CAH67773.1| H0322F07.10 [Oryza sativa Indica Group]
gi|90399191|emb|CAH68178.1| H0403D02.6 [Oryza sativa Indica Group]
gi|125550193|gb|EAY96015.1| hypothetical protein OsI_17886 [Oryza sativa Indica Group]
Length = 170
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 93/125 (74%), Gaps = 8/125 (6%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E E+HVLAVDDS VDR +I ++L+ S +VT VES TRAL+ L L G NV
Sbjct: 45 EAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL-GLVPNV------ 97
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
N+IITDY MPGMTGYELLK++KESS +E+PVVIMSSE+V +I CLEEGAE++++KP
Sbjct: 98 -NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKP 156
Query: 209 VKLSD 213
V+ SD
Sbjct: 157 VRPSD 161
>gi|388511879|gb|AFK44001.1| unknown [Medicago truncatula]
Length = 235
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 101/137 (73%), Gaps = 19/137 (13%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLD-GEQSNVGF--------- 144
HVLAVDDS +DR L+ERLL+ SSCKVT V+SG +AL+YLGL+ E S+
Sbjct: 23 HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILESSSPS 82
Query: 145 --------DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
+ KVNLI+TDY MPGM+GY+LLK++K SS +++VPVV+MSSE+V ++I C
Sbjct: 83 LPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVVMSSENVPSRISMC 141
Query: 197 LEEGAEEYIVKPVKLSD 213
LEEGAEE+++KP++LSD
Sbjct: 142 LEEGAEEFLMKPLQLSD 158
>gi|260446968|emb|CBG76250.1| OO_Ba0005L10-OO_Ba0081K17.1 [Oryza officinalis]
Length = 151
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 93/125 (74%), Gaps = 8/125 (6%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E E+HVLAVDDS VDR +I ++L+ S +VT VES TRAL+ L L G NV
Sbjct: 26 EVQNEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL-GLVPNV------ 78
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
N+IITDY MPGMTGYELLK++KESS +E+PVVIMSSE+V +I CLEEGAE++++KP
Sbjct: 79 -NMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKP 137
Query: 209 VKLSD 213
V+ SD
Sbjct: 138 VRPSD 142
>gi|195644464|gb|ACG41700.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 234
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 97/146 (66%), Gaps = 21/146 (14%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
TV + HVLAVDDS +DRKLIE LL+ SS +VT VESG +AL+ LGL + N D
Sbjct: 2 TVLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGL---RDNGAED 58
Query: 146 A------------------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSE 187
A + V+LIITDY MPGMTGY+LLK++K SS +++PVVIMSSE
Sbjct: 59 ASPPSSSSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSE 118
Query: 188 DVLTQIDSCLEEGAEEYIVKPVKLSD 213
+V +I CL++GAEE+ +KPVK +D
Sbjct: 119 NVPARISRCLQDGAEEFFLKPVKPAD 144
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 89/119 (74%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAVESG RAL+ LG + V++IIT
Sbjct: 88 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEPN----------VSMIIT 137
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +++PVVIMSSE+V T+I CLEEGAE+++VKPV+ SD
Sbjct: 138 DYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASD 196
>gi|162459025|ref|NP_001104855.1| LOC541630 [Zea mays]
gi|12060384|dbj|BAB20579.1| response regulator 4 [Zea mays]
Length = 235
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 97/147 (65%), Gaps = 22/147 (14%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
TV + HVLAVDDS +DRKLIE LL+ SS +VT VESG +AL+ LGL + N D
Sbjct: 2 TVLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGL---RDNGAED 58
Query: 146 A-------------------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS 186
A + V+LIITDY MPGMTGY+LLK++K SS +++PVVIMSS
Sbjct: 59 ASPPSSSSSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSS 118
Query: 187 EDVLTQIDSCLEEGAEEYIVKPVKLSD 213
E+V +I CL++GAEE+ +KPVK +D
Sbjct: 119 ENVPARISRCLQDGAEEFFLKPVKPAD 145
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 89/119 (74%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAVESG RAL+ LG + V++IIT
Sbjct: 33 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP----------NVSMIIT 82
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +++PVVIMSSE+V T+I CLEEGAE+++VKPV+ SD
Sbjct: 83 DYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRISRCLEEGAEDFLVKPVRASD 141
>gi|359492520|ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
vinifera]
Length = 240
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 102/149 (68%), Gaps = 28/149 (18%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGF------ 144
+ HVLAVDDS +DRKL+E+LL +SS VT VESG +AL+YLGL DG ++
Sbjct: 26 QHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSSS 85
Query: 145 --------------------DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIM 184
+ LKVNLI+TDY MPGM+GY+LLK++K SS +++VPVV+M
Sbjct: 86 SSSSSSSSSSSSSSAKPSQQEGLKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVVVM 144
Query: 185 SSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
SSE+V ++I+ CLE GAE++++KPV+LSD
Sbjct: 145 SSENVPSRINMCLEGGAEDFLLKPVQLSD 173
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 90/121 (74%), Gaps = 10/121 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDR +I RLL+ S +VT V+SG RAL+ L L+ E V++I
Sbjct: 6 ELHVLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLSLERE----------VHMI 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MP MTGYELLK++KE++ RE+PVVIMSSE+ +I CLEEGAEE+++KPV+ S
Sbjct: 56 ITDYCMPEMTGYELLKRVKETAELREIPVVIMSSENSPARIRRCLEEGAEEFLIKPVRPS 115
Query: 213 D 213
D
Sbjct: 116 D 116
>gi|357142908|ref|XP_003572733.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 143
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 10/120 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LGL+ V++II
Sbjct: 24 LHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGLEP----------NVSMII 73
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY MP MTGYELLKK+KESS +++PVVIMSSE+V T+I CLEEGAE+++VKPV+ SD
Sbjct: 74 TDYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSD 133
>gi|226492050|ref|NP_001146776.1| uncharacterized protein LOC100280379 [Zea mays]
gi|223942947|gb|ACN25557.1| unknown [Zea mays]
gi|413951289|gb|AFW83938.1| response regulator 4 [Zea mays]
Length = 233
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 97/147 (65%), Gaps = 22/147 (14%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
TV + HVLAVDDS +DRKLIE LL+ SS +VT V+SG +AL+ LGL + N D
Sbjct: 2 TVLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL---RDNGAED 58
Query: 146 A-------------------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS 186
A + V+LIITDY MPGMTGY+LLK++K SS +++PVVIMSS
Sbjct: 59 ASPPSSSSSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSS 118
Query: 187 EDVLTQIDSCLEEGAEEYIVKPVKLSD 213
E+V +I CL++GAEE+ +KPVK +D
Sbjct: 119 ENVPARISRCLQDGAEEFFLKPVKPAD 145
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 89/119 (74%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAVESG RAL+ LG + V++IIT
Sbjct: 18 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP----------NVSMIIT 67
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +++PVVIMSSE+V T+I CLEEGAE+++VKPV+ SD
Sbjct: 68 DYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASD 126
>gi|162458152|ref|NP_001104849.1| cytokinin response regulator2 [Zea mays]
gi|5689236|dbj|BAA82873.1| ZmRR2 [Zea mays]
gi|6009897|dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 90/122 (73%), Gaps = 8/122 (6%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+E HVLAVDDS VDR +I ++L+ S +VT V+S TRAL+ L L G VN+
Sbjct: 35 EEKHVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLAL-------GL-VPDVNM 86
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
IITDY MPGMTGYELLK +KESS R +PVVIMSSE+V T+I CLEEGAE++++KPV+
Sbjct: 87 IITDYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRP 146
Query: 212 SD 213
+D
Sbjct: 147 AD 148
>gi|302141801|emb|CBI19004.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 101/151 (66%), Gaps = 30/151 (19%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVG------- 143
+ HVLAVDDS +DRKL+E+LL +SS VT VESG +AL+YLGL DG ++
Sbjct: 16 QHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSSS 75
Query: 144 ---------------------FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVV 182
LKVNLI+TDY MPGM+GY+LLK++K SS +++VPVV
Sbjct: 76 SSSSSSSSSSSSSSAKPSQQEMQGLKVNLIMTDYCMPGMSGYDLLKRVKGSS-WKDVPVV 134
Query: 183 IMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+MSSE+V ++I+ CLE GAE++++KPV+LSD
Sbjct: 135 VMSSENVPSRINMCLEGGAEDFLLKPVQLSD 165
>gi|413919924|gb|AFW59856.1| cytokinin response regulator2 [Zea mays]
Length = 159
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 88/119 (73%), Gaps = 8/119 (6%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I ++L+ S +VT V+S TRAL+ L L G VN+IIT
Sbjct: 40 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLAL-------GL-VPDVNMIIT 91
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MPGMTGYELLK +KESS R +PVVIMSSE+V T+I CLEEGAE++++KPV+ +D
Sbjct: 92 DYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPAD 150
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 88/119 (73%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I RLL+ S +VT V+SG RAL+ L LD V++IIT
Sbjct: 12 HVLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSLDD----------SVHMIIT 61
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP M+GYELLK++KES+ RE+PVV+MSSE+ T+I CLEEGAEE+++KPV+ SD
Sbjct: 62 DYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFLIKPVRASD 120
>gi|225465889|ref|XP_002266250.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 150
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ HVLAVDDS +DRK IE+LL+ SS +VT V S ++AL++LGL + KVNLI
Sbjct: 8 QFHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQGTKVNLI 67
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
IT Y+MPGMTGY+LLKKIKES+ + +PVVIMSSE++ ++I+ CL EG +++ +KPV+LS
Sbjct: 68 ITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKDFFLKPVQLS 126
Query: 213 D 213
D
Sbjct: 127 D 127
>gi|296090340|emb|CBI40159.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ HVLAVDDS +DRK IE+LL+ SS +VT V S ++AL++LGL + KVNLI
Sbjct: 8 QFHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQGTKVNLI 67
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
IT Y+MPGMTGY+LLKKIKES+ + +PVVIMSSE++ ++I+ CL EG +++ +KPV+LS
Sbjct: 68 ITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKDFFLKPVQLS 126
Query: 213 D 213
D
Sbjct: 127 D 127
>gi|168002238|ref|XP_001753821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695228|gb|EDQ81573.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 124
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 91/120 (75%), Gaps = 2/120 (1%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS +D+++IERLL+ SS +VT V S RAL LGL E + L +NLI+T
Sbjct: 2 HVLAVDDSSIDQRVIERLLKTSSYRVTTVNSAVRALDVLGL-SESRSASSTRLDINLIMT 60
Query: 155 DYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LLK++K ++S +E+PVV+MSSE+ +I+ CL EGAEE+I+KPVK++D
Sbjct: 61 DYCMPEMTGYDLLKRVKAQTSALKEIPVVLMSSENDSNRIERCLAEGAEEFIIKPVKMAD 120
>gi|357164784|ref|XP_003580165.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 137
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 88/119 (73%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+S RAL+ LG V++IIT
Sbjct: 19 HVLAVDDSSVDRAVITGILRSSKFRVTAVDSAKRALELLG----------SGANVSMIIT 68
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS RE+PVVIMSSE+V T+I+ CLEEGAE++++KPV+ SD
Sbjct: 69 DYWMPDMTGYELLKKVKESSKLREIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRRSD 127
>gi|162458935|ref|NP_001104854.1| aberrant phyllotaxy1 [Zea mays]
gi|11041692|dbj|BAB17300.1| response regulator [Zea mays]
gi|414586309|tpg|DAA36880.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 135
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + V++IIT
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTEP----------NVSMIIT 66
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKKIKESS +E+PVVIMSSE+V T+I+ CLEEGAE++++KPV+ SD
Sbjct: 67 DYWMPEMTGYELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPSD 125
>gi|222629233|gb|EEE61365.1| hypothetical protein OsJ_15511 [Oryza sativa Japonica Group]
Length = 526
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 91/119 (76%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + NV ++IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG---SEPNV-------SMIIT 65
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +E+PVVIMSSE+V T+I+ CLEEGAE++++KPV+ SD
Sbjct: 66 DYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSD 124
>gi|296090341|emb|CBI40160.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 96/125 (76%), Gaps = 9/125 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNV 142
M AE + HVLAVDDS +DRK IE+LL+ SS +VT ++S ++AL++LG+ + EQ
Sbjct: 1 MGMAAE--SQFHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGVQEAEQER- 57
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
KVNLIITDY+MPGMTGY+LL+KIKES+ +++PVVIMSSE++ ++I CLEEGAE
Sbjct: 58 -----KVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAE 112
Query: 203 EYIVK 207
++ +K
Sbjct: 113 DFFLK 117
>gi|115459496|ref|NP_001053348.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|71273483|emb|CAI79409.1| Type A response regulator 5 [Oryza sativa Indica Group]
gi|87116378|dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa Japonica Group]
gi|113564919|dbj|BAF15262.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|116310946|emb|CAH67883.1| OSIGBa0153E02-OSIGBa0093I20.12 [Oryza sativa Indica Group]
gi|118790846|tpd|FAA00266.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215741219|dbj|BAG97714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195239|gb|EEC77666.1| hypothetical protein OsI_16696 [Oryza sativa Indica Group]
Length = 134
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + V++IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP----------NVSMIIT 65
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +E+PVVIMSSE+V T+I+ CLEEGAE++++KPV+ SD
Sbjct: 66 DYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSD 124
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + NV ++IIT
Sbjct: 29 HVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLG---SEPNV-------SMIIT 78
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +++PVVIMSSE+V T+I CLEEGAE+++VKPV+ SD
Sbjct: 79 DYWMPEMTGYELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSD 137
>gi|242076534|ref|XP_002448203.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
gi|241939386|gb|EES12531.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
Length = 134
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + V++IIT
Sbjct: 16 HVLAVDDSSVDRAVIAGILRSSHFRVTAVDSGKRALELLGTEP----------NVSMIIT 65
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +E+PVVIMSSE+V T+I+ CLEEGAE++++KPV+ +D
Sbjct: 66 DYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPAD 124
>gi|57834122|emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa Japonica Group]
Length = 137
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + V++IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP----------NVSMIIT 65
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +E+PVVIMSSE+V T+I+ CLEEGAE++++KPV+ SD
Sbjct: 66 DYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSD 124
>gi|449464160|ref|XP_004149797.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 236
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 96/129 (74%), Gaps = 13/129 (10%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN------------VGF 144
LAVDDS +DRKL+E+LL ISSC+VT VESG +AL+YLGL +
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
+KVNLI+TD+ MPGM+GY+LLK++K S ++++PVV+MSSE+ ++I+ CLEEGAEE+
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEF 141
Query: 205 IVKPVKLSD 213
++KP++LSD
Sbjct: 142 LLKPLQLSD 150
>gi|359828774|gb|AEV76989.1| type A response regulator 5, partial [Triticum aestivum]
Length = 119
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 89/119 (74%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + V++IIT
Sbjct: 1 HVLAVDDSSVDRAVISGILRSSRFRVTAVDSGKRALELLGSEP----------NVSMIIT 50
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGYELLKK+KESS +E+PVVIMSSE+V T+I CLEEGAE++++KPV+ SD
Sbjct: 51 DYWMPEMTGYELLKKVKESSKLKEIPVVIMSSENVPTRISRCLEEGAEDFLMKPVRPSD 109
>gi|357456553|ref|XP_003598557.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355487605|gb|AES68808.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|357595944|gb|AET86869.1| cytokinin resposne regulator 9 [Medicago truncatula]
Length = 164
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 12/130 (9%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDAL---- 147
+ HVLAVDDS +DR LIERLL+ SS VT V+SGT+AL++LGL + E N ++
Sbjct: 3 QFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAET 62
Query: 148 ----KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
+VNLIITDY MPGMTGY+LL+KIKES+ +++PVVIMSSE+V EEGAEE
Sbjct: 63 DQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVHQ---GLTEEGAEE 119
Query: 204 YIVKPVKLSD 213
+ +KPV+ SD
Sbjct: 120 FFLKPVQQSD 129
>gi|168002910|ref|XP_001754156.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694710|gb|EDQ81057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 94/124 (75%), Gaps = 5/124 (4%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVG---FDALKVN 150
HVLAVDDS +D+++IE+LL+ SS KVT V S RAL+ LGL D S++ L +N
Sbjct: 3 HVLAVDDSRIDQRVIEKLLKTSSYKVTTVNSALRALELLGLSDSSPSSIKVPLLQKLDIN 62
Query: 151 LIITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
LI+TDY MP MTGY+LLK++K ++S +E+PVV+MSSE+ +I+ CL EGAEE+I+KPV
Sbjct: 63 LIMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSNRIERCLAEGAEEFIIKPV 122
Query: 210 KLSD 213
+++D
Sbjct: 123 QMAD 126
>gi|115450024|ref|NP_001048613.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|48716336|dbj|BAD22948.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273479|emb|CAI79407.1| Type A response regulator 3 [Oryza sativa Indica Group]
gi|87116380|dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa Japonica Group]
gi|113538144|dbj|BAF10527.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|118790834|tpd|FAA00265.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125541719|gb|EAY88114.1| hypothetical protein OsI_09552 [Oryza sativa Indica Group]
gi|125584256|gb|EAZ25187.1| hypothetical protein OsJ_08987 [Oryza sativa Japonica Group]
Length = 131
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M+T E HVLAVDDS VDR +I RLL+ S +VT V+SG RAL+ L LD
Sbjct: 1 MSTKTVPEPEPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSLDR------ 54
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
V++IITDY MP MTG++LLK++KES+ +E+PVV+MSSE+ T+I CLEEGAE+
Sbjct: 55 ----NVHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAED 110
Query: 204 YIVKPVKLSD 213
+++KPV+ SD
Sbjct: 111 FLIKPVRPSD 120
>gi|356549441|ref|XP_003543102.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 211
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 96/134 (71%), Gaps = 10/134 (7%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQY---------LGLDGEQ 139
E + HVL VDDS +DRKL+ERLL+ SSCK T V+SG +AL++
Sbjct: 13 EQQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKFLGLLDDDLDNSSSTSS 72
Query: 140 SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
++ + +KVN+I+TDY MPGM+GY+LLK+IK SS +++VPVVIMSSE+V ++I CLE
Sbjct: 73 ESLQLNGIKVNMIMTDYCMPGMSGYDLLKRIKGSS-WKDVPVVIMSSENVPSRISMCLEG 131
Query: 200 GAEEYIVKPVKLSD 213
GAE++++KP++ SD
Sbjct: 132 GAEKFLLKPLQQSD 145
>gi|449457395|ref|XP_004146434.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
gi|449526784|ref|XP_004170393.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
Length = 162
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 8/127 (6%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL--------DGEQSNVGFDA 146
HVLAVDD+ VDRKL+E+LL+ SSCKVT E+G AL++LGL + E+SN
Sbjct: 26 HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQQR 85
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
KVN+IITDY MPGM+GYELLKKIK SS +EVPVV++SSE+V T+I+ CLEEGAE +++
Sbjct: 86 SKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFML 145
Query: 207 KPVKLSD 213
KP+K SD
Sbjct: 146 KPLKQSD 152
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+V+AVDDS VDR +I LL+ S +VTAV+SG RAL+ LG + NV ++IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG---SEPNV-------SMIIT 141
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LLKKIKESS +++PVVIMSSE+V T+I CLEEGAE++++KPV+ +D
Sbjct: 142 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPAD 200
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+V+AVDDS VDR +I LL+ S +VTAV+SG RAL+ LG + NV ++IIT
Sbjct: 94 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG---SEPNV-------SMIIT 143
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LLKKIKESS +++PVVIMSSE+V T+I CLEEGAE++++KPV+ +D
Sbjct: 144 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPAD 202
>gi|242074746|ref|XP_002447309.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
gi|241938492|gb|EES11637.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
Length = 170
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 88/119 (73%), Gaps = 8/119 (6%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I ++L+ S +VT VES TRAL+ L L VN+IIT
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLALGLLPD--------VNMIIT 102
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MPGMTGYELLK +KESS RE+PVVIMSSE+V T+I CLEEGAE++++KPV+ SD
Sbjct: 103 DYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSD 161
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+V+AVDDS VDR +I LL+ S +VTAV+SG RAL+ LG + NV ++IIT
Sbjct: 93 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG---SEPNV-------SMIIT 142
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LLKKIKESS +++PVVIMSSE+V T+I CLEEGAE++++KPV+ +D
Sbjct: 143 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPAD 201
>gi|168043274|ref|XP_001774110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674517|gb|EDQ61024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 131
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 94/125 (75%), Gaps = 5/125 (4%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKV 149
S + HVL VDDS +D++++E+LL SS KVT V S RAL+ LGL D S+V D +
Sbjct: 2 SSQYHVLTVDDSRIDQRVVEKLLMTSSFKVTTVNSALRALELLGLSDSCPSSVKPD---I 58
Query: 150 NLIITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
NLI+TDY MP MTGY+LLK++K ++S +E+PVV+MSSE+ +I+ CL EGAEE+I+KP
Sbjct: 59 NLIMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSIRIERCLAEGAEEFIIKP 118
Query: 209 VKLSD 213
V+++D
Sbjct: 119 VQMAD 123
>gi|224124816|ref|XP_002319429.1| type-a response regulator [Populus trichocarpa]
gi|222857805|gb|EEE95352.1| type-a response regulator [Populus trichocarpa]
Length = 131
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 78 GFPFWAMATVAECSKELHVLAV---DDSYVDRKLIERLLQISSCKVTAVESGTRALQYLG 134
GF F ++LHVLAV DD +DRK IERLL S KVT E+ +A++YLG
Sbjct: 2 GFDF---------DEKLHVLAVEAVDDGLIDRKAIERLLINSEYKVTTAENKKKAIEYLG 52
Query: 135 L-DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
L DG +N G LKVNLIITDY M GMTGYELLK+IKE +PVV++SSE++ T+I
Sbjct: 53 LADGHHTNHG--DLKVNLIITDYCMRGMTGYELLKRIKE------IPVVVVSSENIPTRI 104
Query: 194 DSCLEEGAEEYIVKPVKLS 212
C+EEGA+E+++KP++LS
Sbjct: 105 KQCMEEGAQEFLLKPLQLS 123
>gi|226497480|ref|NP_001147402.1| RR6 - Corn type-A response regulator [Zea mays]
gi|223946411|gb|ACN27289.1| unknown [Zea mays]
gi|414584832|tpg|DAA35403.1| TPA: response regulatorResponse regulator 1 [Zea mays]
Length = 156
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 89/121 (73%), Gaps = 8/121 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E HVLAVDDS VDR +I R+L+ S KVTAVES TRAL+ L L V++I
Sbjct: 35 EKHVLAVDDSSVDRAVIARILRGSRYKVTAVESATRALELLALGLLPD--------VSMI 86
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLK++KES+ R +PVVIMSSE+V T+I CLEEGAE +++KPV+ +
Sbjct: 87 ITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRPA 146
Query: 213 D 213
D
Sbjct: 147 D 147
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 90/119 (75%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+V+AVDDS VDR +I LL+ S KVTAV+SG RAL+ L D E + V++IIT
Sbjct: 54 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEIL--DSEPN--------VSMIIT 103
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LLKK+KESS +++PVVIMSSE+V T+I CLEEGAEE+++KPV+ SD
Sbjct: 104 DYWMPEMTGYDLLKKVKESSELKQIPVVIMSSENVPTRITRCLEEGAEEFLLKPVRPSD 162
>gi|260765421|gb|ACX49754.1| cytokinin response regulator 11 [Zea mays]
Length = 156
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 89/121 (73%), Gaps = 8/121 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E HVLAVDDS VDR +I R+L+ S KVTAVES TRAL+ L L V++I
Sbjct: 35 EKHVLAVDDSSVDRTVIARILRGSRYKVTAVESATRALELLALGLLPD--------VSMI 86
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLK++KES+ R +PVVIMSSE+V T+I CLEEGAE +++KPV+ +
Sbjct: 87 ITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRPA 146
Query: 213 D 213
D
Sbjct: 147 D 147
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 94/141 (66%), Gaps = 15/141 (10%)
Query: 73 KETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQY 132
+E P A V C V+AVDDS VDR ++ LL+ S +VTAV+SG RAL+
Sbjct: 12 EERKVAVPIGNDAEVEPC-----VIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEI 66
Query: 133 LGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQ 192
LG + NV ++IITDY MP MTGY+LLKK+KESS + +PVVIMSSE+V T+
Sbjct: 67 LG---SEPNV-------SMIITDYWMPEMTGYDLLKKVKESSKLKRIPVVIMSSENVPTR 116
Query: 193 IDSCLEEGAEEYIVKPVKLSD 213
I CLEEGAE++++KPV+ SD
Sbjct: 117 ITRCLEEGAEDFLLKPVRPSD 137
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 88/118 (74%), Gaps = 10/118 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+AVDD VDR L+ LL+ S +VTAV+SG RAL+ LG + NV ++IITD
Sbjct: 50 VIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILG---SEPNV-------SMIITD 99
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
Y MP MTGY+LLKK+KESS +++PVVIMSSE+V T+I CLEEGAE++++KPV+ SD
Sbjct: 100 YWMPEMTGYDLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSD 157
>gi|162463265|ref|NP_001104838.1| cytokinin response regulator1 [Zea mays]
gi|4512216|dbj|BAA75253.1| response regulator [Zea mays]
gi|6009895|dbj|BAA85112.1| response regulator 1 [Zea mays]
Length = 157
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 88/121 (72%), Gaps = 8/121 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E HVLAVDDS VDR +I R+L+ S +VTAVES TRAL+ L L V++I
Sbjct: 36 EKHVLAVDDSSVDRAVIARILRGSRYRVTAVESATRALELLALGLLPD--------VSMI 87
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLK +KES+ R +PVVIMSSE+V T+I CLEEGAE +++KPV+ +
Sbjct: 88 ITDYWMPGMTGYELLKCVKESAALRGIPVVIMSSENVPTRITRCLEEGAEGFLLKPVRPA 147
Query: 213 D 213
D
Sbjct: 148 D 148
>gi|195611056|gb|ACG27358.1| RR6 - Corn type-A response regulator [Zea mays]
Length = 156
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 88/121 (72%), Gaps = 8/121 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E HVLAVDDS VDR +I R+L+ S KVTAVES TRAL+ L L V++I
Sbjct: 35 EKHVLAVDDSSVDRAVIARILRGSRYKVTAVESATRALELLALGLLPD--------VSMI 86
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLK++KES+ R +PVVIMSSE+V T+I LEEGAE +++KPV+ +
Sbjct: 87 ITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRYLEEGAEGFLLKPVRPA 146
Query: 213 D 213
D
Sbjct: 147 D 147
>gi|168022134|ref|XP_001763595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685088|gb|EDQ71485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 93/135 (68%), Gaps = 14/135 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCK---VTAVESGTRALQYLGL----------DGEQ 139
E H+LAVDDS +D+K+IERLL+ +S K +T V S RAL+YLGL D +
Sbjct: 4 EYHILAVDDSRIDQKVIERLLKSASYKGTELTTVNSALRALKYLGLSESCASPVMPDVNR 63
Query: 140 SNVGFDALKVNLIITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLE 198
V+LI+TDY MP MTGYELLK +K E+S F++VPV++MSSE+ ++I+ CL
Sbjct: 64 ILCDLQRNAVHLIMTDYCMPEMTGYELLKIVKAETSAFKDVPVILMSSENDSSRIERCLA 123
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+I+KPV++ D
Sbjct: 124 EGAEEFIIKPVQMKD 138
>gi|255545370|ref|XP_002513745.1| Two-component response regulator ARR9, putative [Ricinus communis]
gi|223546831|gb|EEF48328.1| Two-component response regulator ARR9, putative [Ricinus communis]
Length = 229
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 90/143 (62%), Gaps = 36/143 (25%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV------------ 142
HVLAVDDS +DRKL+ERLL++SS +VT V+SG +AL+YLGL N
Sbjct: 41 HVLAVDDSLLDRKLLERLLRVSSYQVTCVDSGDKALEYLGLLNNLENATTASSSSSSFSQ 100
Query: 143 ------------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
+ +KVNLI+TDY MPGM+GY+LLK++K S +++VPVV+M
Sbjct: 101 SAPPPPPPQQQQQQEGMKVNLIMTDYCMPGMSGYDLLKRVK-GSPWKDVPVVVM------ 153
Query: 191 TQIDSCLEEGAEEYIVKPVKLSD 213
CLE GAEE+++KPV+LSD
Sbjct: 154 -----CLEGGAEEFLLKPVQLSD 171
>gi|22831009|dbj|BAC15873.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273487|emb|CAI79411.1| Type A response regulator 7 [Oryza sativa Indica Group]
gi|87116384|dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa Japonica Group]
gi|118790860|tpd|FAA00268.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 206
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 86/119 (72%), Gaps = 14/119 (11%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+V+AVDDS VDR +I LL+ S + +SG RAL+ LG + NV ++IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG---SEPNV-------SMIIT 137
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LLKKIKESS +++PVVIMSSE+V T+I CLEEGAE++++KPV+ +D
Sbjct: 138 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPAD 196
>gi|414878657|tpg|DAA55788.1| TPA: hypothetical protein ZEAMMB73_373156 [Zea mays]
Length = 123
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 79/112 (70%), Gaps = 4/112 (3%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV--- 142
TV + HVLAVDDS VDRKLIE LL+ SS +VT V+SG++AL+ LGL S
Sbjct: 2 TVPDAESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSS 61
Query: 143 -GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
+ VNLIITDY MPGMTGY+LLK++K SS +++PVVIMSSE+V +I
Sbjct: 62 PDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 113
>gi|357496037|ref|XP_003618307.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355493322|gb|AES74525.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 207
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 53/183 (28%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M + HVLAVDDS +DR LIERLL+ SS VT ++S ++AL++LGL + ++
Sbjct: 1 MGISMAAETQFHVLAVDDSIIDRMLIERLLKTSSFHVTTMDSASKALKFLGLVEDVASEV 60
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKES------------------------------ 173
+ VNLII DY MPGMTGY+LL+KIK +
Sbjct: 61 HGDVDVNLIIADYCMPGMTGYDLLRKIKGARKVNLGRLKLKIATKSKLRRLGRVVFLGAK 120
Query: 174 ----------SVFREVPVVIMSSEDVLTQIDS-------------CLEEGAEEYIVKPVK 210
F+++PVVIMSSE+V ++I S C EEGAEE+ +KPV+
Sbjct: 121 ITTLGNLEGIQTFKDIPVVIMSSENVSSRISSLTYYGLIVCNCIKCFEEGAEEFFLKPVQ 180
Query: 211 LSD 213
SD
Sbjct: 181 QSD 183
>gi|168064728|ref|XP_001784311.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664142|gb|EDQ50873.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 149
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 87/130 (66%), Gaps = 12/130 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ----------SNVGF 144
HVLAVDDS VD+++IE+LL+ VT V+S RAL LGL + S V
Sbjct: 3 HVLAVDDSMVDQRVIEKLLKPLHA-VTTVDSAVRALDVLGLSETRPSSSKVLHFNSFVQI 61
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
L +NLI+TDY MP MTGY+LLK++K +SS +E+PVV+MSSE+ +I CL EGA+
Sbjct: 62 KKLDINLIMTDYFMPEMTGYDLLKRVKAKSSALKEIPVVLMSSENDSHRIRRCLAEGADA 121
Query: 204 YIVKPVKLSD 213
++ KPV+L+D
Sbjct: 122 FLTKPVQLAD 131
>gi|242049694|ref|XP_002462591.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
gi|241925968|gb|EER99112.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
Length = 123
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD++VDR + R+L+ + +VT VE +AL++L ++ + VNLI+T
Sbjct: 7 HVLIVDDTFVDRLVASRVLKNCNIQVTIVEGPKQALEFLDVEND----------VNLILT 56
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MPGMTGY+LL ++KES + +PVVIMSS+++ ++ CL+ GA+EYI+KP+K D
Sbjct: 57 DYCMPGMTGYDLLLEVKESPKLKHIPVVIMSSDNIPERMQKCLDAGAKEYIIKPIKAVD 115
>gi|449526812|ref|XP_004170407.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 194
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 76/109 (69%), Gaps = 15/109 (13%)
Query: 120 VTAVESGTRALQYLGLDGEQS---------------NVGFDALKVNLIITDYTMPGMTGY 164
VT V+SG++AL++LGL E N ++VNLIITDY MPGMTG+
Sbjct: 3 VTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGF 62
Query: 165 ELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+LLKK+KES+ R +PVVIMSSE+V ++I+ CLEEGAEE+ +KPV+L D
Sbjct: 63 DLLKKVKESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLCD 111
>gi|413951288|gb|AFW83937.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 127
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 81/127 (63%), Gaps = 22/127 (17%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
TV + HVLAVDDS +DRKLIE LL+ SS +VT V+SG +AL+ LGL + N D
Sbjct: 2 TVLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGL---RDNGAED 58
Query: 146 A-------------------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS 186
A + V+LIITDY MPGMTGY+LLK++K SS +++PVVIMSS
Sbjct: 59 ASPPSSSSSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSS 118
Query: 187 EDVLTQI 193
E+V +I
Sbjct: 119 ENVPARI 125
>gi|255564944|ref|XP_002523465.1| receptor histidine kinase, putative [Ricinus communis]
gi|223537293|gb|EEF38924.1| receptor histidine kinase, putative [Ricinus communis]
Length = 185
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG-FDALKVNLI 152
+HVLAVDD ++DRK++E+LL+ +S KVT+V++G +A++ LGL ++ + ++ K+++I
Sbjct: 19 IHVLAVDDCFLDRKIVEKLLKNASFKVTSVDNGKKAMEILGLSQDKVDKSTYNDQKIDII 78
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY MP M GY+LL +K S + +PVVI+SSE +I CL GAE+++ KP++
Sbjct: 79 LTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQRISRCLANGAEDFLQKPLQQK 138
Query: 213 D 213
D
Sbjct: 139 D 139
>gi|414870674|tpg|DAA49231.1| TPA: hypothetical protein ZEAMMB73_704016 [Zea mays]
Length = 123
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 81/119 (68%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD++VDR + R+L+ + +VT VE +AL +L ++ + VNLI+T
Sbjct: 7 HVLIVDDTFVDRLVASRVLKTCNIQVTMVEGPKQALDFLDVEND----------VNLILT 56
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MPGMTGY+LL ++KES + +PVV+MSS+ + ++ C++ GA+EYI+KP+K D
Sbjct: 57 DYCMPGMTGYDLLMEVKESPKLKHIPVVVMSSDHIPQRMQKCMDAGAKEYIIKPIKAID 115
>gi|226492361|ref|NP_001146526.1| uncharacterized protein LOC100280118 [Zea mays]
gi|219887677|gb|ACL54213.1| unknown [Zea mays]
Length = 127
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 80/127 (62%), Gaps = 22/127 (17%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
TV + HVLAVDDS +DRKLIE LL+ SS +VT V+SG +AL+ LG + N D
Sbjct: 2 TVLDAESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLG---PRDNGAED 58
Query: 146 A-------------------LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS 186
A + V+LIITDY MPGMTGY+LLK++K SS +++PVVIMSS
Sbjct: 59 ASPPSSSSSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSS 118
Query: 187 EDVLTQI 193
E+V +I
Sbjct: 119 ENVPARI 125
>gi|242081261|ref|XP_002445399.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
gi|241941749|gb|EES14894.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
Length = 123
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 84/130 (64%), Gaps = 15/130 (11%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M TVA HVL VDD++VDR + R+L+ + +VT VE +AL +L ++ +
Sbjct: 1 MGTVAP-----HVLIVDDTFVDRLVASRVLKSCNIQVTIVEGPKQALDFLDVEND----- 50
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
V LI+TDY MPGMTGY+LL ++KES +PVVIMSS+++ +I CL A+E
Sbjct: 51 -----VKLILTDYCMPGMTGYDLLMEVKESPKLNHIPVVIMSSDNIPERIQKCLAARAKE 105
Query: 204 YIVKPVKLSD 213
YI+KP+K++D
Sbjct: 106 YIIKPIKVAD 115
>gi|357163783|ref|XP_003579845.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 224
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 85/125 (68%), Gaps = 11/125 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSC----KVTAVESGTRALQYLGL-DGEQSNVGFDALK 148
+ VL VDDS VDRK++E +L S+C V AV+S +A+++LGL DG++
Sbjct: 10 MRVLLVDDSPVDRKVVELVLGSSACAGSFHVIAVDSAKKAMEFLGLKDGKEQQ------D 63
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++++TDY MP MTGY+LLK IK S + +PV++MSSE+ +I CL+ GAE+YIVKP
Sbjct: 64 IDMVLTDYCMPEMTGYDLLKAIKALSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKP 123
Query: 209 VKLSD 213
++ D
Sbjct: 124 LRSKD 128
>gi|224034623|gb|ACN36387.1| unknown [Zea mays]
gi|413918403|gb|AFW58335.1| RR1-Corn type-A response regulator [Zea mays]
Length = 232
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 83/136 (61%), Gaps = 11/136 (8%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGL-DG 137
A A E + VL VDDS VDR++ + LL SC V AV+S +A+++LGL DG
Sbjct: 3 AAAGGVEAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDG 62
Query: 138 EQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL 197
+ V++++TDY MP MTGY+LLK IK + +PVV+MSSED +I CL
Sbjct: 63 GEEQA------VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCL 116
Query: 198 EEGAEEYIVKPVKLSD 213
GAE++IVKP++ D
Sbjct: 117 SAGAEDFIVKPLQSKD 132
>gi|195656043|gb|ACG47489.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 232
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 83/136 (61%), Gaps = 11/136 (8%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGL-DG 137
A A E + VL VDDS VDR++ + LL SC V AV+S +A+++LGL DG
Sbjct: 3 AAAGGVEAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDG 62
Query: 138 EQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL 197
+ V++++TDY MP MTGY+LLK IK + +PVV+MSSED +I CL
Sbjct: 63 GEEQA------VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCL 116
Query: 198 EEGAEEYIVKPVKLSD 213
GAE++IVKP++ D
Sbjct: 117 SAGAEDFIVKPLQSKD 132
>gi|242075916|ref|XP_002447894.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
gi|241939077|gb|EES12222.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
Length = 194
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 82/125 (65%), Gaps = 10/125 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGL-DGEQSNVGFDALK 148
+ VL VDDS VDR++ + LL +SC V AV+S +A+++LGL DG G
Sbjct: 14 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDG-----GGKEQT 68
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++++TDY MP MTGY+LL+ IK + + +PV++MSSED +I CL GAE+YIVKP
Sbjct: 69 IDMVLTDYCMPEMTGYDLLRAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDYIVKP 128
Query: 209 VKLSD 213
++ D
Sbjct: 129 LQSKD 133
>gi|195651747|gb|ACG45341.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 238
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 82/125 (65%), Gaps = 11/125 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGL-DGEQSNVGFDALK 148
+ VL VDDS VDR++ + LL +SC V AV+S +A+++LGL DG +
Sbjct: 12 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQA------ 65
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++++TDY MP MTGY+LLK IK + + +PV++MSSED +I CL GAE++IVKP
Sbjct: 66 IDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDFIVKP 125
Query: 209 VKLSD 213
++ D
Sbjct: 126 LQSKD 130
>gi|242073184|ref|XP_002446528.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
gi|241937711|gb|EES10856.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
Length = 249
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 82/125 (65%), Gaps = 10/125 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGL-DGEQSNVGFDALK 148
+ VL VDDS VDR++ + LL +SC V AV+S +A+++LGL DG G
Sbjct: 14 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDG-----GGKEQA 68
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++++TDY MP MTGY+LLK IK + + +PV++MSSED +I CL GAE++IVKP
Sbjct: 69 IDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLSAGAEDFIVKP 128
Query: 209 VKLSD 213
++ D
Sbjct: 129 LQSKD 133
>gi|219363715|ref|NP_001137062.1| uncharacterized protein LOC100217235 [Zea mays]
gi|194698206|gb|ACF83187.1| unknown [Zea mays]
gi|224029529|gb|ACN33840.1| unknown [Zea mays]
gi|414587101|tpg|DAA37672.1| TPA: RR1-Corn type-A response regulator [Zea mays]
Length = 244
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 82/125 (65%), Gaps = 11/125 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGL-DGEQSNVGFDALK 148
+ VL VDDS VDR++ + LL +SC V AV+S +A+++LGL DG +
Sbjct: 12 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQA------ 65
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++++TDY MP MTGY+LLK IK + + +PV++MSSED +I CL GAE++IVKP
Sbjct: 66 IDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDFIVKP 125
Query: 209 VKLSD 213
++ D
Sbjct: 126 LQSKD 130
>gi|115458564|ref|NP_001052882.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|87116392|dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa Japonica Group]
gi|113564453|dbj|BAF14796.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|118790814|tpd|FAA00263.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215704280|dbj|BAG93120.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740726|dbj|BAG97382.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 9/122 (7%)
Query: 96 VLAVDDSYVDRKLIERLLQISSC----KVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
VL VDDS VDR++++ LL S+C V AV+S +A+++LGL E D +
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQAID-----M 64
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++TDY MP MTGYELLK IK S + +PV++MSSE+ +I C+ GAE++IVKP++
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 212 SD 213
D
Sbjct: 125 KD 126
>gi|71273475|emb|CAI79405.1| Type A response regulator 1 [Oryza sativa Indica Group]
gi|218194921|gb|EEC77348.1| hypothetical protein OsI_16028 [Oryza sativa Indica Group]
Length = 231
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 9/122 (7%)
Query: 96 VLAVDDSYVDRKLIERLLQISSC----KVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
VL VDDS VDR++++ LL S+C V AV+S +A+++LGL E D +
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQAID-----M 64
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++TDY MP MTGYELLK IK S + +PV++MSSE+ +I C+ GAE++IVKP++
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 212 SD 213
D
Sbjct: 125 KD 126
>gi|359828770|gb|AEV76987.1| type A response regulator 1, partial [Triticum aestivum]
Length = 209
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 12/123 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQ----ISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKVN 150
VL VDDS VDRK++E +L S V AV+S +A+++LGL DG++ V+
Sbjct: 5 VLLVDDSPVDRKVVELVLGSNTFAGSFHVVAVDSAKKAMEFLGLKDGKEQ-------AVD 57
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+++TDY MP MTGY+LLK IK S + +PV++MSSE+ +I CL+ GAE+YIVKP++
Sbjct: 58 MVLTDYCMPEMTGYDLLKAIKAMSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLQ 117
Query: 211 LSD 213
D
Sbjct: 118 SKD 120
>gi|87116398|dbj|BAE79358.1| typeA response regulator 12 [Oryza sativa Japonica Group]
gi|118790879|tpd|FAA00271.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 78/119 (65%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD+ VDR ++ L + +VTAVES +AL +L D E VN+I++
Sbjct: 5 HVLVVDDTLVDRHVVSMALMRHNVRVTAVESVMQALMFL--DSEHD--------VNMIVS 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LL ++K+S +PVVI SS+++ +I CL+ GA++YI+KPVK+ D
Sbjct: 55 DYCMPDMTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVD 113
>gi|222628933|gb|EEE61065.1| hypothetical protein OsJ_14923 [Oryza sativa Japonica Group]
Length = 231
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 9/122 (7%)
Query: 96 VLAVDDSYVDRKLIERLLQISSC----KVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
VL VDDS VDR++++ LL S+C V AV+S +AL +LGL + D +
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKALGFLGLKEKGKEQAID-----M 64
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++TDY MP MTGYELLK IK S + +PV++MSSE+ +I C+ GAE++IVKP++
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 212 SD 213
D
Sbjct: 125 KD 126
>gi|162459462|ref|NP_001104858.1| response regulator 7 [Zea mays]
gi|12060390|dbj|BAB20582.1| response regulator 7 [Zea mays]
Length = 242
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 84/130 (64%), Gaps = 12/130 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQ-------ISSCKVTAVESGTRALQYLGL---DGEQSNVGFD 145
VL VDDS VDRK++E LL+ + VTAV+SG +A+++L L G+ + D
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAAD 74
Query: 146 A--LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
A + +++++TDY MP MTGY+LLK IK S +PVV+MSSE+ +I CL GAE+
Sbjct: 75 ANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAED 134
Query: 204 YIVKPVKLSD 213
+I+KP+K D
Sbjct: 135 FILKPLKTKD 144
>gi|87116400|dbj|BAE79359.1| typeA response regulator 13 [Oryza sativa Japonica Group]
Length = 121
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD++VDR +I L + +VTAVES +AL +L D E VN+I++
Sbjct: 5 HVLVVDDTHVDRHVISMALMRHNVRVTAVESVMQALVFL--DSEHD--------VNMIVS 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LL ++K+S +PV+I SS+++ +I C + GA++YI+KPVK++D
Sbjct: 55 DYCMPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPERIRKCFDGGAKDYILKPVKIAD 113
>gi|194697208|gb|ACF82688.1| unknown [Zea mays]
gi|413922696|gb|AFW62628.1| response regulator 7 [Zea mays]
Length = 242
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 84/130 (64%), Gaps = 12/130 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQ-------ISSCKVTAVESGTRALQYLGL---DGEQSNVGFD 145
VL VDDS VDRK++E LL+ + VTAV+SG +A+++L L G+ + D
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAAD 74
Query: 146 A--LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
A + +++++TDY MP MTGY+LLK IK S +PVV+MSSE+ +I CL GAE+
Sbjct: 75 ANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAED 134
Query: 204 YIVKPVKLSD 213
+I+KP+K D
Sbjct: 135 FILKPLKTKD 144
>gi|195651177|gb|ACG45056.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 233
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 9/134 (6%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVT--AVESGTRALQYLGL-DGEQ 139
A A E + VL VDDS VDR++ + LL SC + ++S +A+++LGL DG +
Sbjct: 3 AAAGGVEAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIDSARKAMEFLGLKDGGE 62
Query: 140 SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
V++++TDY MP MTGY+LLK IK + +PVV+MSSED +I CL
Sbjct: 63 EQA------VDIVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSA 116
Query: 200 GAEEYIVKPVKLSD 213
GAE++IVKP++ D
Sbjct: 117 GAEDFIVKPLQSKD 130
>gi|27260981|dbj|BAC45098.1| putative response regulator [Oryza sativa Japonica Group]
gi|40253364|dbj|BAD05296.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273489|emb|CAI79412.1| Type A response regulator 8 [Oryza sativa Indica Group]
gi|87116396|dbj|BAE79357.1| typeA response regulator 8 [Oryza sativa Japonica Group]
gi|118790867|tpd|FAA00269.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD++VDR ++ L + +VTAVES +AL +L D E V++I++
Sbjct: 5 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL--DSEHD--------VDMIVS 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY LL ++K+S +PVVI SS+++ +I CL+ GA++YI+KPVK+ D
Sbjct: 55 DYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVD 113
>gi|357138640|ref|XP_003570898.1| PREDICTED: two-component response regulator ARR8-like [Brachypodium
distachyon]
Length = 133
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 10/125 (8%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E ++ HVL VDD+ DR ++ LLQ S +VTAVE AL++L D +
Sbjct: 11 EGTRRPHVLVVDDTRGDRLVLTYLLQRSHVRVTAVEGVKEALEFL--DSQND-------- 60
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
VN+I++DY MP M GY+LL ++K S +PVVI SS+++ +I CL+ GA+EYIVKP
Sbjct: 61 VNMIVSDYCMPEMNGYDLLMEVKNSPPLAHIPVVIASSDNIPERIQKCLDGGAKEYIVKP 120
Query: 209 VKLSD 213
V++ D
Sbjct: 121 VQIPD 125
>gi|37956247|gb|AAP32005.1| putative two-component system response regulator [Populus tremula x
Populus alba]
Length = 74
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 52/56 (92%)
Query: 158 MPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MPGMTGYELLKKIKESS FRE+PVVIMSSE+V+ +ID CLEEGAEE+I KPVKLSD
Sbjct: 2 MPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLEEGAEEFIAKPVKLSD 57
>gi|357149551|ref|XP_003575151.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 226
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLL---QISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
E ++L VL VDDS VDRK+++ LL + S+ VT V+SG +A++ LG Q+
Sbjct: 8 EPEEKLRVLVVDDSPVDRKIVQLLLNNHRGSAFHVTVVDSGKKAMELLG-QKPQAQEEQQ 66
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
+++++TDY MP MTGY+LLK IK + +PVV+MSSE+ +I+ CL GAE++I
Sbjct: 67 RRSIDIVLTDYCMPEMTGYDLLKAIKALNSPNPIPVVVMSSENEPQRINRCLTAGAEDFI 126
Query: 206 VKPVKLSD 213
VKP++ D
Sbjct: 127 VKPLRTKD 134
>gi|125561361|gb|EAZ06809.1| hypothetical protein OsI_29053 [Oryza sativa Indica Group]
Length = 185
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 10/119 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD++VDR ++ L + +VTAVES +AL +L D E V++I++
Sbjct: 69 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL--DSEHD--------VDMIVS 118
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY LL ++K+S +PVVI S+++ +I CL+ GA++YI+KPVK+ D
Sbjct: 119 DYCMPDMTGYNLLMEVKKSPTLAHLPVVIAFSDNIPERIRKCLDGGAKDYILKPVKIVD 177
>gi|242061964|ref|XP_002452271.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
gi|241932102|gb|EES05247.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
Length = 168
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 81/124 (65%), Gaps = 11/124 (8%)
Query: 100 DDSYVDRKLIERLLQ-----ISSCKVTAVESGTRALQYLGLDGEQSNVGFDA-----LKV 149
DDS +DRK++E LL+ + VTAV+SG +A+++L L EQ ++ A L V
Sbjct: 21 DDSPIDRKVVELLLRNHKGGAAPFHVTAVDSGKKAMEHLRL-MEQDSLDSSAAHANELTV 79
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
++++TDY MP MTGY+LLK IK S +PVV+MSSE+ +I CL GAE++I+KP+
Sbjct: 80 DIVLTDYCMPEMTGYDLLKAIKALSSPTPIPVVVMSSENEPQRISRCLTAGAEDFILKPL 139
Query: 210 KLSD 213
K D
Sbjct: 140 KTKD 143
>gi|125539898|gb|EAY86293.1| hypothetical protein OsI_07664 [Oryza sativa Indica Group]
Length = 205
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 25/147 (17%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSC--------------KVTAVESGTRALQYLGLD 136
++ + VL VDDS VDR+++E LL+ + C VTAV+SG +A++ LG
Sbjct: 3 AEAVRVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRR 61
Query: 137 -GEQSNV---------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS 186
G++ ++ + +++++TDY MP MTGY+LLK IK +PVV+MSS
Sbjct: 62 RGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSS 121
Query: 187 EDVLTQIDSCLEEGAEEYIVKPVKLSD 213
E+ +I CL GAE++I+KP+K++D
Sbjct: 122 ENEPQRISRCLTAGAEDFILKPLKMND 148
>gi|46390908|dbj|BAD16423.1| putative response regulator 7 [Oryza sativa Japonica Group]
gi|71273477|emb|CAI79406.1| Type A response regulator 2 [Oryza sativa Indica Group]
gi|87116394|dbj|BAE79356.1| typeA response regulator 2 [Oryza sativa Japonica Group]
gi|118790824|tpd|FAA00264.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215697882|dbj|BAG92075.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 25/147 (17%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSC--------------KVTAVESGTRALQYLGLD 136
++ + VL VDDS VDR+++E LL+ + C VTAV+SG +A++ LG
Sbjct: 3 AEAVRVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRR 61
Query: 137 -GEQSNV---------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS 186
G++ ++ + +++++TDY MP MTGY+LLK IK +PVV+MSS
Sbjct: 62 RGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSS 121
Query: 187 EDVLTQIDSCLEEGAEEYIVKPVKLSD 213
E+ +I CL GAE++I+KP+K++D
Sbjct: 122 ENEPQRISRCLTAGAEDFILKPLKMND 148
>gi|297599428|ref|NP_001047142.2| Os02g0557800 [Oryza sativa Japonica Group]
gi|255671003|dbj|BAF09056.2| Os02g0557800, partial [Oryza sativa Japonica Group]
Length = 306
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 25/147 (17%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSC--------------KVTAVESGTRALQYLGLD 136
++ + VL VDDS VDR+++E LL+ + C VTAV+SG +A++ LG
Sbjct: 57 AEAVRVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRR 115
Query: 137 -GEQSNV---------GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS 186
G++ ++ + +++++TDY MP MTGY+LLK IK +PVV+MSS
Sbjct: 116 RGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSS 175
Query: 187 EDVLTQIDSCLEEGAEEYIVKPVKLSD 213
E+ +I CL GAE++I+KP+K++D
Sbjct: 176 ENEPQRISRCLTAGAEDFILKPLKMND 202
>gi|357463579|ref|XP_003602071.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355491119|gb|AES72322.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 128
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 70/109 (64%), Gaps = 20/109 (18%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLD-GEQSNVGF------ 144
+ HVLAVDDS +DR L+ERLL+ SSCKVT V+SG +AL+YLGL+ E S+
Sbjct: 20 EHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILESS 79
Query: 145 -----------DALKVNLIITDYTMPGMTGYELLK--KIKESSVFREVP 180
+ KVNLI+TDY MPGM+GY+LLK K+K SS R +P
Sbjct: 80 SPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKVKISSFPRHLP 128
>gi|94966174|emb|CAJ29968.1| response regulator [Zea mays]
gi|413922105|gb|AFW62037.1| response regulator [Zea mays]
Length = 124
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%), Gaps = 9/119 (7%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VD S VD + +L + +VT AL++L D S+V +LI+T
Sbjct: 7 HVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFL--DANNSHV-------DLILT 57
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LL+++KES + +PVVI ++ + +I C E GAEEY++KP+K+SD
Sbjct: 58 DYCMPDMTGYDLLREVKESPRLKHIPVVITCTDVIPERIIECFEGGAEEYMIKPLKVSD 116
>gi|94966176|emb|CAJ29969.1| response regulator [Zea mays]
Length = 124
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 9/119 (7%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VD S VD + +L + +VT AL++L D S+V +LI+T
Sbjct: 7 HVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFL--DANNSHV-------DLILT 57
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
DY MP MTGY+LL+++KES + +PVV ++ + +I C E GAEEY++KP+K+SD
Sbjct: 58 DYCMPDMTGYDLLREVKESPRLKHIPVVXTCTDVIPERIIECFEGGAEEYMIKPLKVSD 116
>gi|449529439|ref|XP_004171707.1| PREDICTED: two-component response regulator ARR8-like, partial
[Cucumis sativus]
Length = 109
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 12/87 (13%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN------------VGF 144
LAVDDS +DRKL+E+LL ISSC+VT VESG +AL+YLGL +
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIK 171
+KVNLI+TD+ MPGM+GY+LLK++K
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK 109
>gi|119505208|ref|ZP_01627283.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
gi|119458899|gb|EAW39999.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
Length = 482
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+LAVDD +R+L+ RLLQ + V + ESG AL+ L D + V++++ D
Sbjct: 130 ILAVDDLPENRELVSRLLQKTGHTVISAESGEEALELL-----------DTMGVDVVLLD 178
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPG+ G E+LK++KE R PVV++S + + QI C+E GA++Y++KP
Sbjct: 179 LVMPGIGGAEVLKRLKEDERLRATPVVMISGQQDMDQIVMCIEAGADDYLLKP 231
>gi|226875187|gb|ACO88941.1| cytokinin A-type response regulator 1 [Vitis vinifera]
Length = 65
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 46/49 (93%)
Query: 165 ELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
ELLKKIKESS FRE PVVIMSSE++LT+ID CLEEGAE++IVKPVKLSD
Sbjct: 1 ELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSD 49
>gi|125561365|gb|EAZ06813.1| hypothetical protein OsI_29056 [Oryza sativa Indica Group]
Length = 167
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 10/97 (10%)
Query: 117 SCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVF 176
S +VTAVES +AL +L D E VN+I++DY MP MTGY+LL ++K+S
Sbjct: 73 SIRVTAVESVMQALMFL--DSEHD--------VNMIVSDYCMPDMTGYDLLMEVKKSPKL 122
Query: 177 REVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+PVVI SS+++ +I CL+ GA++YI+KPVK+ D
Sbjct: 123 AHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVD 159
>gi|27260986|dbj|BAC45103.1| response regulator-like protein [Oryza sativa Japonica Group]
gi|125603232|gb|EAZ42557.1| hypothetical protein OsJ_27123 [Oryza sativa Japonica Group]
Length = 167
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 10/97 (10%)
Query: 117 SCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVF 176
S +VTAVES +AL +L D E VN+I++DY MP MTGY+LL ++K+S
Sbjct: 73 SIRVTAVESVMQALMFL--DSEHD--------VNMIVSDYCMPDMTGYDLLMEVKKSPKL 122
Query: 177 REVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+PVVI SS+++ +I CL+ GA++YI+KPVK+ D
Sbjct: 123 AHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVD 159
>gi|32479678|emb|CAE02513.1| P0076O17.11 [Oryza sativa Japonica Group]
Length = 108
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCK----VTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
VL VDDS VDR++++ LL S+C V AV+S +A+++LGL E D
Sbjct: 9 RVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQAID----- 63
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSED 188
+++TDY MP MTGYELLK IK S + +PV++MSSE+
Sbjct: 64 MVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSEN 101
>gi|254283593|ref|ZP_04958561.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
gi|219679796|gb|EED36145.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
Length = 479
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+LAVDD +R+LI RLL S V ESG AL+ LG + V++++ D
Sbjct: 127 ILAVDDMPENRELISRLLHRSGHTVITAESGEEALELLG-----------TMAVDVVLLD 175
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPG+ G E+L+++K+ R PVV++S + QI C++ GA++Y++KP
Sbjct: 176 LMMPGIGGAEVLRRLKDDPELRATPVVMISGRQDMQQIIGCIQAGADDYLLKP 228
>gi|414586308|tpg|DAA36879.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 148
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 10/77 (12%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDDS VDR +I +L+ S +VTAV+SG RAL+ LG + V++IIT
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTE----------PNVSMIIT 66
Query: 155 DYTMPGMTGYELLKKIK 171
DY MP MTGYELLKKIK
Sbjct: 67 DYWMPEMTGYELLKKIK 83
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E HVL V+D V K +E+LL+ + KVT +G A++ L + +KV+LI
Sbjct: 2 EFHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVL------TACRHSGVKVDLI 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+TD MP +TG++L+ ++ F +VPVV+MSS+D + + GA +Y++KP++
Sbjct: 56 LTDILMPEVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIR 113
>gi|219888705|gb|ACL54727.1| unknown [Zea mays]
gi|413951287|gb|AFW83936.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 144
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 47/56 (83%)
Query: 158 MPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MPGMTGY+LLK++K SS +++PVVIMSSE+V +I CL++GAEE+ +KPVK +D
Sbjct: 1 MPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPAD 56
>gi|297726345|ref|NP_001175536.1| Os08g0358800 [Oryza sativa Japonica Group]
gi|38637522|dbj|BAD03775.1| putative response regulator [Oryza sativa Japonica Group]
gi|118790937|tpd|FAA00272.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125603143|gb|EAZ42468.1| hypothetical protein OsJ_27037 [Oryza sativa Japonica Group]
gi|255678389|dbj|BAH94264.1| Os08g0358800 [Oryza sativa Japonica Group]
Length = 135
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 10/97 (10%)
Query: 117 SCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVF 176
+ +VTAVES +AL +L D E VN+I++DY MP MTGY+LL ++K+S
Sbjct: 41 NTRVTAVESVMQALVFL--DSEHD--------VNMIVSDYCMPEMTGYDLLMEVKKSPRL 90
Query: 177 REVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+PV+I SS+++ +I C + GA++YI+KPVK++D
Sbjct: 91 VHLPVIIASSDNIPERIRKCFDGGAKDYILKPVKIAD 127
>gi|223942921|gb|ACN25544.1| unknown [Zea mays]
gi|413918402|gb|AFW58334.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 179
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 130 LQYLGL-DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSED 188
+++LGL DG + V++++TDY MP MTGY+LLK IK + +PVV+MSSED
Sbjct: 1 MEFLGLKDGGEEQA------VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSED 54
Query: 189 VLTQIDSCLEEGAEEYIVKPVKLSD 213
+I CL GAE++IVKP++ D
Sbjct: 55 EPQRISRCLSAGAEDFIVKPLQSKD 79
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDD + R ++ LL +VT+ G AL+ L G L++T
Sbjct: 49 HVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLR--------GSAPDTFQLVLT 100
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP + G +LL +K+ + R VPVV+MSS D + C+++GAEEY+VKPV
Sbjct: 101 DVCMPELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPV 155
>gi|310639938|ref|YP_003944696.1| sensor protein [Paenibacillus polymyxa SC2]
gi|309244888|gb|ADO54455.1| Sensor protein [Paenibacillus polymyxa SC2]
Length = 1046
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VLAVDD V+ +++E LL + C V AV+ ALQ L +G + +L+ITD
Sbjct: 715 VLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL--NGRA--------RFDLVITD 764
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+ MP M+G EL ++I+E E+PV+++++ D+ I + GA +++ KPV
Sbjct: 765 WMMPEMSGIELCRRIREGYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKPV 818
>gi|413918400|gb|AFW58332.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 168
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V++++TDY MP MTGY+LLK IK + +PVV+MSSED +I CL GAE++IVKP
Sbjct: 4 VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKP 63
Query: 209 VKLSD 213
++ D
Sbjct: 64 LQSKD 68
>gi|413918401|gb|AFW58333.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 170
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V++++TDY MP MTGY+LLK IK + +PVV+MSSED +I CL GAE++IVKP
Sbjct: 6 VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKP 65
Query: 209 VKLSD 213
++ D
Sbjct: 66 LQSKD 70
>gi|374620319|ref|ZP_09692853.1| family 3 adenylate cyclase [gamma proteobacterium HIMB55]
gi|374303546|gb|EHQ57730.1| family 3 adenylate cyclase [gamma proteobacterium HIMB55]
Length = 475
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 15/128 (11%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A+ T CS VL VDD + L+ RLL+ C V ESG +AL L +
Sbjct: 111 ALDTFEGCS----VLVVDDLPENLDLMSRLLRKMHCSVITAESGEQALGLLASE------ 160
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
V+L++ D MP + G E+L +IK+S R +PV+++S + QI C++ GA+
Sbjct: 161 -----PVDLVLLDLVMPNIDGREVLARIKQSEQLRAIPVIMISGRQDMDQIVDCIQVGAD 215
Query: 203 EYIVKPVK 210
+Y++KPV
Sbjct: 216 DYLLKPVN 223
>gi|239907979|ref|YP_002954720.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239797845|dbj|BAH76834.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 122
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVTA E G L+ L D + V+LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDQQ----------VDLIIT 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K ++E ++R++P+V++S+E I + L GA Y+VKP +
Sbjct: 54 DINMPRMDGITFIKTVREQDIYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|254459178|ref|ZP_05072600.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|373868639|ref|ZP_09605037.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|207084071|gb|EDZ61361.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|372470740|gb|EHP30944.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
Length = 639
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS + R +I LL+ V E G AL L + + +NL+ITD
Sbjct: 127 ILVVDDSALFRLMISNLLRRHKFHVLEAEDGKIALNILNKNPD----------INLVITD 176
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
Y MP M G EL+K ++ + +++P++++SS D + I C++ GA +Y+ KP
Sbjct: 177 YEMPNMNGLELIKSVRNNHKLKDIPMIVISSVDAQSTIVDCMKHGANDYLHKP 229
>gi|357633416|ref|ZP_09131294.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|386391833|ref|ZP_10076614.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
gi|357581970|gb|EHJ47303.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|385732711|gb|EIG52909.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
Length = 122
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVTA E G L+ L D + V+LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDPQ----------VDLIIT 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K ++E V+R++P+V++S+E I + L GA Y+VKP +
Sbjct: 54 DINMPRMDGITFIKTVREQEVYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|428319185|ref|YP_007117067.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428242865|gb|AFZ08651.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 352
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E VL VDD+ V+R L+ R LQ VT E G +AL+ L D FD L+
Sbjct: 5 EGSVLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRRDP------FD-----LV 53
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M GY++L+ +K R +PV+++S+ D + I C+E GAE+Y+ KP
Sbjct: 54 LLDIMMPQMNGYQVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L GE NV +LI+
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWE--ALKGEPQNV-------DLIL 101
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E + +++PV++MSS D ++ + C+ +GA +++VKPV+
Sbjct: 102 TEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVR 158
>gi|346991425|ref|ZP_08859497.1| adenylate/guanylate cyclase [Ruegeria sp. TW15]
Length = 341
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD+ V+R L+ R +++ + + E+G A++ L SN FD L++
Sbjct: 7 HLLIVDDNKVNRLLLSRSVELLGHQASVAENGRVAMEML------SNQPFD-----LLLL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+++L+ IK + R++PV++ SS + L + C+E GAE+Y+ KPV
Sbjct: 56 DIEMPEMDGFQVLEAIKSDTDLRDLPVIVTSSVEGLDNVVRCIELGAEDYLPKPVN 111
>gi|334117422|ref|ZP_08491513.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460531|gb|EGK89139.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 352
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E VL VDD+ V+R L+ R LQ VT E G +AL+ L D FD L+
Sbjct: 5 EGSVLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRSDP------FD-----LV 53
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M GY++L+ +K R +PV+++S+ D + I C+E GAE+Y+ KP
Sbjct: 54 LLDIMMPQMNGYQVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|386039129|ref|YP_005958083.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
gi|343095167|emb|CCC83376.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
Length = 1046
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VLAVDD V+ +++E LL + C V AV+ ALQ L +G + +L+ITD
Sbjct: 715 VLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL--NGRA--------RFDLVITD 764
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+ MP M+G L ++I+E E+PV+++++ D+ I + GA +++ KPV
Sbjct: 765 WMMPEMSGIGLCRRIREGYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKPV 818
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+LH+LAVDD V + + L+ V+ +G AL+ L +S FD LI
Sbjct: 11 DLHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVL-----KSGNTFD-----LI 60
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
++D MP M G + L++ + S F ++P+++MSS D + CL +GA++YI+KP+
Sbjct: 61 LSDVMMPVMNGPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPL 117
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+ ++HVL VDD + R + LL+ +VT ESG AL+ L E +
Sbjct: 27 TSDVHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLRRGTE----------FH 76
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+++TD MPG+ G LL+ ++ R++PVV+MS+ + + C++ GAE+Y++KPV
Sbjct: 77 MLLTDVMMPGIDGPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPV 135
>gi|373458202|ref|ZP_09549969.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
gi|371719866|gb|EHO41637.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
Length = 748
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L+VL +DD+ ++R +++L+ + +VT ES +AL+ L ++N FD L
Sbjct: 480 KGLNVLLIDDNPINRSYFQKILEKNKLQVTTAESAFKALEIL-----KTNQRFD-----L 529
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
IITD MP M G+EL +I+ +++VP+++++S + + C + G Y+ KPVKL
Sbjct: 530 IITDAQMPEMDGFELSTQIRALKNYKKVPIILLTSSGMRGDSERCKQIGINAYLPKPVKL 589
Query: 212 SD 213
+D
Sbjct: 590 TD 591
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
TV E LH+L +D+ V++KL RLL+ + ++G L+ L + N
Sbjct: 617 TVREVLPRLHILVAEDNPVNQKLAIRLLEKNGYYADIAKNGLEVLEKL-----KKN---- 667
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFR-EVPVVIMSSEDVLTQIDSCLEEGAEEY 204
+LI+ D MP M G + +KI+E + +P++ +++ + ID CL + Y
Sbjct: 668 --HYDLILMDVQMPEMDGLQATQKIRELENGKSHIPIIALTAHAMKKDIDMCLNAAMDGY 725
Query: 205 IVKPVK 210
+ KP++
Sbjct: 726 VSKPIR 731
>gi|298529775|ref|ZP_07017178.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511211|gb|EFI35114.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 122
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R LI +++ VT E G AL+ L + A V+LIIT
Sbjct: 4 HILMVDDSKTVRNLIAFIVKKEGFHVTTAEDGLDALEKL----------YAASNVDLIIT 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ ++ ++E FR+VPV+I+S+E + L GA Y+VKP +
Sbjct: 54 DINMPRMDGFTFVQNLREQEAFRDVPVIILSTEGQEKDKEQGLSLGANLYMVKPAQ 109
>gi|436841790|ref|YP_007326168.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170696|emb|CCO24067.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 122
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT E G L+ L + A KV+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL----------YSAEKVDLIIS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K ++E ++++P++++S+E I + L GA Y+VKP +
Sbjct: 54 DVNMPRMDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLNLGANLYMVKPAQ 109
>gi|332664021|ref|YP_004446809.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332332835|gb|AEE49936.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1609
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 73/118 (61%), Gaps = 10/118 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S+++H+L VDD V++++++ L + ++T V SG ALQ L D ++
Sbjct: 1195 SEKVHILIVDDEVVNQQVLKNFLNKAIYRITQVLSGEEALQVLD----------DDDTID 1244
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
L++ D MP M+GYE+ +KI+E + E+PV+++++++ ++ + + L GA +YI KP
Sbjct: 1245 LVLLDVMMPRMSGYEVCQKIREKHLPSELPVLMITAKNQVSDLVTGLNTGANDYIAKP 1302
>gi|255588654|ref|XP_002534675.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223524788|gb|EEF27709.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 132
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
Query: 90 CSKELHVLAVDD-SYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL- 147
S +LH L VDD S + R L+ L ++ K++ E G +ALQ L + DAL
Sbjct: 1 MSSDLHFLVVDDFSTMRRILVNLLRELGHSKISEAEDGEKALQLL--------LAKDALI 52
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+++++TD+ MP M G+ LL++I+E ++PV+++++E I S GA+ YIVK
Sbjct: 53 GIDIVVTDWNMPVMGGFTLLQRIREHPDLHQLPVILVTAEAKKENIISAAAAGADGYIVK 112
Query: 208 P 208
P
Sbjct: 113 P 113
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+D R ++ LL+ + +VT V +G+ A L E++N FD L
Sbjct: 304 RNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLL----EEANSNFD-----L 354
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++TD MP ++G LL K+ + + VP+VIMSS D L + CL +GA +Y+VKPV+
Sbjct: 355 VLTDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVR 413
>gi|346992834|ref|ZP_08860906.1| two-component hybrid sensor and regulator [Ruegeria sp. TW15]
Length = 520
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD +R L+ R L+ +V + G AL+ L S FD L++ D
Sbjct: 176 ILVVDDVEANRTLLARRLERDGHQVWTADGGYSALEKL------SQHAFD-----LVLLD 224
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + GY++LK++KE+ +R++PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 225 LMMPDLNGYDVLKRLKENDDWRDIPVIMISAFDEIESVARCVEIGAEDYLPKP 277
>gi|308067232|ref|YP_003868837.1| regulator of cell autolysis [Paenibacillus polymyxa E681]
gi|305856511|gb|ADM68299.1| Putative regulator of cell autolysis [Paenibacillus polymyxa E681]
Length = 1039
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VLAVDD V+ +++E LL + C V AV+ AL L +G + +L+ITD
Sbjct: 707 VLAVDDDEVNLRVLEELLYTTGCSVVAVDHAEEALHML--NGRT--------RFDLVITD 756
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+ MP M+G EL ++I+E E+PV+++++ D+ I + GA +++ KPV
Sbjct: 757 WMMPEMSGIELCRRIRERYSLSELPVLLLTARDLPGDIRAGFMAGANDFLRKPV 810
>gi|303247352|ref|ZP_07333625.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302491266|gb|EFL51155.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 122
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVTA E G L+ L D + V+LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDPQ----------VDLIIT 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K ++E +R++P+V++S+E I + L GA Y+VKP +
Sbjct: 54 DINMPRMDGITFIKTVREQDAYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|300866045|ref|ZP_07110777.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
gi|300335960|emb|CBN55935.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
Length = 352
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+E +VL VDD+ V+R L+ R LQ KV E G AL+ + + FD L
Sbjct: 4 EEGNVLVVDDNEVNRDLLARRLQRQGHKVQVAEDGILALEMM------RSHPFD-----L 52
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ D MP M GY++L+ +K R +PV+++S+ D + I C+E GAE+Y+ KP
Sbjct: 53 VLLDIMMPQMNGYQVLEHLKADDKLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LLQ S KV AV G A + L E+SN +++LI+
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLK---EKSN------EIDLIL 76
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL + E + +PV++MSSED +T + C+ +GA +Y++KP++
Sbjct: 77 TELDLPAISGFALLALVMEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMR 133
>gi|428217823|ref|YP_007102288.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
gi|427989605|gb|AFY69860.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
Length = 243
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS ++R + R L+ CK+T G AL+ L S FD LI+ D
Sbjct: 8 VLIVDDSEMNRDTLARRLRQQGCKITMAADGKEALKIL------SKQLFD-----LILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + GY +L K+K S + +PV+++S+ + L + C+E GAE+Y+ KP
Sbjct: 57 IMMPEVDGYTVLGKVKASETLQHMPVIMISALEELDSVMRCMEMGAEDYLTKP 109
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L GE NV +LI+
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKA--WEALKGEPQNV-------DLIL 53
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E + +++PV++MSS D ++ + C+ +GA +++VKPV+
Sbjct: 54 TEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVR 110
>gi|357167771|ref|XP_003581325.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 81
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 10/77 (12%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+V+AVDDS VDR +I LL+ S KVTAV+SG RAL+ LD E + V++IIT
Sbjct: 7 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEI--LDSEPN--------VSMIIT 56
Query: 155 DYTMPGMTGYELLKKIK 171
DY MP MTGY LLKKIK
Sbjct: 57 DYWMPEMTGYNLLKKIK 73
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+D R ++ LL+ + +VT V +G+ A L E++N FD L
Sbjct: 184 RNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLL----EEANSNFD-----L 234
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++TD MP ++G LL K+ + + VP+VIMSS D L + CL +GA +Y+VKPV+
Sbjct: 235 VLTDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVR 293
>gi|300311026|ref|YP_003775118.1| chemotaxis response regulator receiver domain-containing protein
[Herbaspirillum seropedicae SmR1]
gi|300073811|gb|ADJ63210.1| chemotaxis response regulator receiver domain protein
[Herbaspirillum seropedicae SmR1]
Length = 134
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
S + H L VDD R++I LL ++ KVT + GT A + L +S AL
Sbjct: 1 MSTDQHFLVVDDFSTMRRIIIGLLKELEYLKVTDADDGTSAWKIL-----ESG----ALP 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ +ITD+ MPGM G LLKKI+E+ + +PV+++S+E I E GA+ YIVKP
Sbjct: 52 ISFVITDWNMPGMDGLGLLKKIRETPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKP 111
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+ ++HVL VDD + R + LL+ +VT ESG AL+ L E
Sbjct: 19 ATSDVHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLRRGTE----------F 68
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++TD MPG+ G LL+ ++ R++PV++MS+ + + C++ GAE+Y++KPV
Sbjct: 69 HLLLTDVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPV 128
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L GE NV +LI+
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKA--WEALKGEPQNV-------DLIL 101
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E + +++PV++MSS D ++ + C+ +GA +++VKPV+
Sbjct: 102 TEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVR 158
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L G NV +LI+
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELL--KGRPHNV-------DLIL 100
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++GY LL I E + + +PV++MSS+D ++ + C+ GA +Y+VKP++
Sbjct: 101 TEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIR 157
>gi|452851441|ref|YP_007493125.1| Response regulator receiver protein [Desulfovibrio piezophilus]
gi|451895095|emb|CCH47974.1| Response regulator receiver protein [Desulfovibrio piezophilus]
Length = 122
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT+ E G L+ L + A +V+LI++
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTSAEDGLDGLEKL----------YSATEVDLIVS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K ++E +R++P+V++S+E I + L GA Y+VKP +
Sbjct: 54 DVNMPRMDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQ 109
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++HVL VDD V R L+ +L+ + +VT SG A+ L E+ + NL+
Sbjct: 8 DVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL----ERGT------QFNLL 57
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+TD MP + G LL ++ + ++E+PVV+MSS + + +C+ GAE+Y++KPV
Sbjct: 58 LTDVMMPDVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPV 114
>gi|411118667|ref|ZP_11391047.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410710530|gb|EKQ68037.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 351
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD +R L+ R LQ KVT +G AL GL +QS FD LI+ D
Sbjct: 8 LLVVDDMEANRDLLTRRLQRQGHKVTVATNGREAL---GLIKQQS---FD-----LILCD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M GY++L+++K R +PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 57 IMMPEMDGYQVLEELKADPGLRHIPVIMISALDDMESVVRCIELGAEDYLFKP 109
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L G+ N+ +LI+
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEML--KGKPHNI-------DLIL 94
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++GY LL I E + + +PV++MSS+D ++ + C+ GA +Y+VKP++
Sbjct: 95 TEVELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIR 151
>gi|410464253|ref|ZP_11317706.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982639|gb|EKO39075.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 122
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVTA E G L+ L D + V+LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDQQ----------VDLIIT 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K ++E ++R++P+V++S+E I L GA Y+VKP +
Sbjct: 54 DINMPRMDGITFIKTVREQDLYRDIPIVVLSTEGEERDIHVGLSIGANLYMVKPAQ 109
>gi|159897134|ref|YP_001543381.1| guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
gi|159890173|gb|ABX03253.1| adenylate/guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
Length = 355
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS +R L++R L + V E+G +AL Y+ QS+ ++LI+ D
Sbjct: 8 ILVVDDSEDNRYLLQRQLLRRNYGVVLAENGQQALDYV-----QSHT------IDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G+E+L+ +K++ R +PV+I+S+ D + + ++ GAE+Y+ KP
Sbjct: 57 IMMPVMNGFEVLQNLKQNEQLRHIPVIIVSAADDMENVVKGIQMGAEDYLAKP 109
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L G NV +LI+
Sbjct: 49 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWELL--KGRPHNV-------DLIL 99
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++GY LL I E + + +PV++MSS+D ++ + C+ GA +Y+VKP++
Sbjct: 100 TEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIR 156
>gi|222623065|gb|EEE57197.1| hypothetical protein OsJ_07146 [Oryza sativa Japonica Group]
Length = 158
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++++TDY MP MTGY+LLK IK +PVV+MSSE+ +I CL GAE++I+KP
Sbjct: 30 IDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKP 89
Query: 209 VKLSD 213
+K++D
Sbjct: 90 LKMND 94
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 73/117 (62%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L+VL V+ R+++ LL+ +V + E+G +A YL + +++N+ +L++
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYL--EDKRNNI-------DLVL 101
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ MPG++G LL +I ++ + +PV++MSS D ++ + CL +GA +++VKP++
Sbjct: 102 TEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIR 158
>gi|218885879|ref|YP_002435200.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756833|gb|ACL07732.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 122
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT E G L+ L + + KV+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL----------YSSEKVDLIIS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K ++E +R++P+V++S+E I + GA Y+VKP +
Sbjct: 54 DVNMPRMDGFTFIKTVREQEAYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQ 109
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L +L V+ R ++ LL+ +VTAV +G+ A L E +N FD L
Sbjct: 181 RSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLL----EDANSNFD-----L 231
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++TD MP ++G LL K+ + R VP+VIMSS D L + CL +GA +Y+VKPV+
Sbjct: 232 VLTDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVR 290
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L +L V+ R ++ LL+ +VTAV +G+ A L E +N FD L
Sbjct: 181 RSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLL----EDANSNFD-----L 231
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++TD MP ++G LL K+ + R VP+VIMSS D L + CL +GA +Y+VKPV+
Sbjct: 232 VLTDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVR 290
>gi|196234681|ref|ZP_03133495.1| histidine kinase [Chthoniobacter flavus Ellin428]
gi|196221254|gb|EDY15810.1| histidine kinase [Chthoniobacter flavus Ellin428]
Length = 682
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD ++R+++ R LQ +C+ V SG AL L + K ++++ D
Sbjct: 168 MLIVDDESLNREILIRRLQREACRPVGVRSGPEALDLLRRE-----------KFDVVMLD 216
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM G ++L +K+ R +PV+++S+ + ++ C+E GAE+Y+ KPV
Sbjct: 217 IQMPGMNGIDVLHALKQDPQLRHLPVIMLSALTDVDRVARCIELGAEDYLPKPV 270
>gi|167644818|ref|YP_001682481.1| integral membrane sensor hybrid histidine kinase [Caulobacter sp.
K31]
gi|167347248|gb|ABZ69983.1| integral membrane sensor hybrid histidine kinase [Caulobacter sp.
K31]
Length = 859
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V+R++I+ L C + VE+G AL L +A +L++ D
Sbjct: 724 VLVVDDHPVNRRVIKLFLAPFDCDLVEVENGREALDAL-----------EAEPFDLVLMD 772
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP M G E ++++ + +PV+ ++++ + +QID+CLE G + +I KP+ L D
Sbjct: 773 VNMPVMDGLEATRRLRRDPRWMTLPVIALTADVMRSQIDTCLEAGMDAHIAKPIDLRD 830
>gi|39996387|ref|NP_952338.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens PCA]
gi|39983267|gb|AAR34661.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens PCA]
Length = 772
Score = 73.2 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN 141
WA+A + + L VL VDDS V RK++ LL+ +VT G AL +G +
Sbjct: 534 WAVAEKSVAVRPLSVLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIGRE----- 588
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEE 199
FD L++ D MP M G+E ++ I+ E++ +P++ +++ + + CLE
Sbjct: 589 -AFD-----LVLMDVQMPVMDGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEA 642
Query: 200 GAEEYIVKPVKLSD 213
GA++Y+ KPV S+
Sbjct: 643 GADDYLAKPVNFSE 656
>gi|409911822|ref|YP_006890287.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens KN400]
gi|298505397|gb|ADI84120.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens KN400]
Length = 772
Score = 73.2 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 82 WAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN 141
WA+A + + L VL VDDS V RK++ LL+ +VT G AL +G +
Sbjct: 534 WAVAEKSVAVRPLSVLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIGRE----- 588
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEE 199
FD L++ D MP M G+E ++ I+ E++ +P++ +++ + + CLE
Sbjct: 589 -AFD-----LVLMDVQMPVMDGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEA 642
Query: 200 GAEEYIVKPVKLSD 213
GA++Y+ KPV S+
Sbjct: 643 GADDYLAKPVNFSE 656
>gi|60893116|gb|AAX37306.1| CheY [Desulfovibrio gigas]
Length = 123
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
++L VDDS R L+ +L+ KVTA E+G L+ L + +V+LII+
Sbjct: 5 NILIVDDSKTVRNLVAFILKKEGYKVTAAENGLDGLEKL----------YSMEQVDLIIS 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ ++ ++E ++R++P+V++S+E I L+ GA Y+VKP +
Sbjct: 55 DINMPKMDGFTFIRHVREQVLYRDLPIVVLSTEGQEKDIQQGLQLGANLYMVKPAQ 110
>gi|317153581|ref|YP_004121629.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
gi|316943832|gb|ADU62883.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
Length = 122
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT E G L+ L + A +V+LI++
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL----------YSAKEVDLIVS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K ++E +R++P+V++S+E I + L GA Y+VKP +
Sbjct: 54 DVNMPRMDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQ 109
>gi|242081263|ref|XP_002445400.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
gi|241941750|gb|EES14895.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
Length = 141
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL V++ VD + LL+ + +V AV+ +AL+ L + E + V LI+++
Sbjct: 26 VLIVENCQVDYFVTSYLLRGHNVQVIAVQGPLQALELL--NAEHN--------VKLILSN 75
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
Y MP MTGY+LL ++K+S +PVVI S + + CL+ GA++YI+KP+K +D
Sbjct: 76 YWMPNMTGYDLLMEMKKSPKLSHLPVVITSFDKSPEVVKKCLDGGAKDYIIKPIKHAD 133
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
Query: 89 ECSKEL-HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
E +KE+ +VL +D+ + R + LLQ+ + +V A E+G +A L L E FD
Sbjct: 8 EQAKEIINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDEL-LKTENE---FD-- 61
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
LI+ D +P MTG ELL+ IK ++VPV++MS +D + +CL GAE+Y+VK
Sbjct: 62 ---LILLDLGLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVK 118
Query: 208 PVKL 211
PV
Sbjct: 119 PVNF 122
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
Query: 89 ECSKE-LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
E +KE ++VL +D+ + R + LLQ+ + +V A E+G +A L L E FD
Sbjct: 8 EQAKEVINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDEL-LKTENE---FD-- 61
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
LI+ D +P MTG ELL+ IK ++VPV++MS +D + +CL GAE+Y+VK
Sbjct: 62 ---LILLDLGLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVK 118
Query: 208 PVKL 211
PV
Sbjct: 119 PVNF 122
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++H+L VDD + R ++ LL+ S KVT SG AL+ L G +L
Sbjct: 3 NDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILR--------GQPPGTFSL 54
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I+TD MP + G ELL+ ++ + +PV++MS+ + + C+ GAE+Y++KPV
Sbjct: 55 ILTDVMMPDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPV 112
>gi|83310215|ref|YP_420479.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
gi|82945056|dbj|BAE49920.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
Length = 537
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VL DDS +R ++ R L +V AV G A++ + FD L++
Sbjct: 160 RVLVADDSKANRDVLVRYLSREGHQVVAVADGLAAVEAV------FGQAFD-----LVLL 208
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MPGM G E+LK IK S R +PV+++S+ D L I C+E GAE+Y+ KP
Sbjct: 209 DMIMPGMNGDEVLKAIKADSRLRSLPVIMISALDGLDSIVRCIEAGAEDYLPKP 262
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L +L V+ R ++ LL+ +VTAV +G+ A L E +N FD L
Sbjct: 10 RSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLL----EDANSNFD-----L 60
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++TD MP ++G LL K+ + R VP+VIMSS D L + CL +GA +Y+VKPV+
Sbjct: 61 VLTDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVR 119
>gi|242280189|ref|YP_002992318.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
gi|242123083|gb|ACS80779.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
Length = 122
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT E G LDG + D KV+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDG--------LDGLEKLYSLD--KVDLIIS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K ++E ++++P++++S+E I + L GA Y+VKP +
Sbjct: 54 DVNMPRMDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLSLGANLYMVKPAQ 109
>gi|428312293|ref|YP_007123270.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
gi|428253905|gb|AFZ19864.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
Length = 353
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VL VDD+ +R L+ R ++ VT E G +AL+ + + FD L++
Sbjct: 7 RVLVVDDNEANRDLLARRVRRQGHTVTVAEDGIKALELMAQEP------FD-----LVLL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M GY++L+ +K R +PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 56 DIMMPKMNGYQVLEHLKNDPNLRHIPVIVISAVDDINSVVECIELGAEDYLPKP 109
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+HVL VDD + R + ++L+ +VT ESG A++ L E NL++
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLRRGTE----------FNLLL 100
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
TD MP + G +LL+ ++ S F ++PV++MS+ + C+ GA++Y++KPV
Sbjct: 101 TDVMMPDIDGPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPV 156
>gi|220906186|ref|YP_002481497.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
gi|219862797|gb|ACL43136.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
Length = 406
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ ++R L+ R L+ V E+G +ALQ L + FD L++ D
Sbjct: 176 ILVVDDTLINRDLLSRRLERQGHTVKLSENGQQALQLL------ESQSFD-----LVLLD 224
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G ELL+ +K++ ++++PV+++S+ D + C+E GAE+Y+ KP
Sbjct: 225 VIMPKMNGLELLRLMKDTPNWKDIPVIMISALDEVESAVRCIELGAEDYLTKP 277
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + VL V+D R ++ LLQ S KVTAV +G +A + L E G D L
Sbjct: 71 RSIKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVL----EDPENGID-----L 121
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 122 VLTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIR 180
>gi|34496645|ref|NP_900860.1| sensor/response regulator hybrid [Chromobacterium violaceum ATCC
12472]
gi|34330304|gb|AAQ58865.2| probable sensor/response regulator hybrid [Chromobacterium
violaceum ATCC 12472]
Length = 1105
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L VDDS ++R++ +R+ + V G AL +LGL G + V++++
Sbjct: 777 LRLLVVDDSDINREVAQRIFEDEGASVALANDGKEALDWLGLHGGE---------VDIVL 827
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M GYE + I+ + +PVV +++ L Q D+ E G +YI KP
Sbjct: 828 MDVQMPVMDGYEATRAIRATPALAHLPVVALTAGAFLAQQDAAREAGMSDYIAKP 882
Score = 44.7 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 21/128 (16%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLG--LDGEQSNVGFDALKVN 150
+L+VL DD+ + R+ + KV +VESG A++ + LDG+Q+ V+
Sbjct: 634 DLNVLIADDNPIARETLGVTASELGWKVRSVESGRLAVEKVMAMLDGDQA--------VD 685
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMS---SEDVLTQIDSCLEEGAE---EY 204
+++ D+ MP M G + I+++ + +P+++M+ S +VL E AE E
Sbjct: 686 VVVLDWKMPDMDGLAAAQAIRQACRGKRMPIILMATAYSREVLQA-----EPAAELVTEV 740
Query: 205 IVKPVKLS 212
+ KPV S
Sbjct: 741 LNKPVTPS 748
>gi|302343447|ref|YP_003807976.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301640060|gb|ADK85382.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 121
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS R L+ +L+ + V G LQ L A +V+LII+D
Sbjct: 5 ILVVDDSLTIRNLLSMVLRQNGHDVVTAGDGFEGLQQLA-----------AHRVDLIISD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP M G +KKI+++ +PV+++S+E ID+ ++ GA +Y+VKPV
Sbjct: 54 LNMPRMDGLSFIKKIRQNDSTSAIPVILLSTEKASRDIDNAMDAGASKYLVKPV 107
>gi|254513978|ref|ZP_05126039.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
gi|219676221|gb|EED32586.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
Length = 496
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+LAVDD +R+L+ R L S V G AL+ L +N V++++ D
Sbjct: 144 ILAVDDREENRELLARYLTRSGHFVVTAPGGAEALEML------ANA-----DVDVVLLD 192
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM G E+L++IK R PV+++S E + I C+E GA++Y+ KP
Sbjct: 193 RMMPGMDGREVLRRIKAEPKLRATPVIMISGEQDMQGIIECIEAGADDYLFKP 245
>gi|344338081|ref|ZP_08769014.1| CheA signal transduction histidine kinase [Thiocapsa marina 5811]
gi|343802135|gb|EGV20076.1| CheA signal transduction histidine kinase [Thiocapsa marina 5811]
Length = 766
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 15/115 (13%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG--FDALKVNLI 152
HVL VDDS R++ + +L+ S +VT E G LDG Q VG FDA +
Sbjct: 648 HVLVVDDSLNTREIEKEVLEASGYRVTLAEDG--------LDGWQKAVGGRFDA-----V 694
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+TD MPG+ G+ L K++E+ +R P++I++S ++ GA+ YIVK
Sbjct: 695 LTDVEMPGLDGFSLTAKLRENDKYRSTPIIIVTSRQTREDKQRGIQVGADAYIVK 749
>gi|225027306|ref|ZP_03716498.1| hypothetical protein EUBHAL_01562 [Eubacterium hallii DSM 3353]
gi|224955368|gb|EEG36577.1| response regulator receiver domain protein [Eubacterium hallii DSM
3353]
Length = 505
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 11/125 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M + K +L VDDS ++R++++ +L + + A E+G +A+Q +G N+G
Sbjct: 1 MKVIKNMDKRQKILIVDDSKLNREILKEILGETYNYLEA-ENGNQAIQMIG-----ENIG 54
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
+NL++ D MP M G+E+L+ +K S E PV+++SSED + + E G +
Sbjct: 55 -----INLMLLDINMPQMNGFEVLEIMKRSQCIAETPVIMISSEDAVNTMRKAYELGITD 109
Query: 204 YIVKP 208
YI +P
Sbjct: 110 YITRP 114
>gi|222640462|gb|EEE68594.1| hypothetical protein OsJ_27121 [Oryza sativa Japonica Group]
Length = 123
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V++I++DY MP MTGY LL ++K+S +PVVI SS+++ +I CL+ GA++YI+KP
Sbjct: 51 VDMIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKP 110
Query: 209 VKLSD 213
VK+ D
Sbjct: 111 VKIVD 115
>gi|403381459|ref|ZP_10923516.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1069
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 70 KKFKETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRA 129
+ +E P A + + +L VDD V+ +++E +L + +VT V SG A
Sbjct: 720 RALQEAETTIPEGPAALLGNIPRRPLILMVDDDPVNLQVMEAILSPDNYEVTMVTSGKEA 779
Query: 130 LQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV 189
L L D + +L+I+D MP M+GYEL +KI+E E+PV+++++ D
Sbjct: 780 LAML-----------DKKEWDLVISDIMMPQMSGYELTRKIRERFTLTELPVLLLTARDQ 828
Query: 190 LTQIDSCLEEGAEEYIVKPVK 210
I + GA +Y+ KPV+
Sbjct: 829 GKDIQAGFLAGANDYVAKPVE 849
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ + KV AV G +A + L ++LI+
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILK---------GRPRSIDLIL 106
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++GY LL I E + + +PV++MSS+D ++ + C+ GA +Y+VKP+++++
Sbjct: 107 TEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINE 166
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL VD R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 59 KTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNS--------IDL 109
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 110 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 168
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S +V AV G +A + L E V+LI+
Sbjct: 159 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPE---------SVDLIL 209
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++GY LL I E + + +PV++MS++D + + C+ +GA +Y+VKP++ ++
Sbjct: 210 TEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNE 269
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ + KV AV G +A + L G N FD LI+
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL--KGRPRN--FD-----LIL 70
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++GY LL I E + +PV++MSS+D ++ + C+ GA +Y+VKP+++++
Sbjct: 71 TEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINE 130
>gi|386829043|ref|ZP_10116150.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
gi|386429927|gb|EIJ43755.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
Length = 120
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS D L++ +L+ + + +G +Q +K NLII
Sbjct: 3 HILIVDDSPTDAYLVKNILESQGYQTSEASNGEEGIQK-----------AKEIKPNLIIM 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MPG+ G++ +KI +S + +PV+I+SS+D+ + L +GA+E++VKPVK
Sbjct: 52 DVVMPGLNGFQATRKITKSEDTKSIPVIIVSSKDMESDRAWGLMQGAKEFLVKPVK 107
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L V+ R++I LL+ S KV AV G +A + L G N+ +L++
Sbjct: 39 LRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETL--KGRPHNI-------DLVL 89
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E V + +PV++MSS D +T + C+ +GA ++++KPV+
Sbjct: 90 TEVELPSISGFALLTLIMEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVR 146
>gi|206889466|ref|YP_002249856.1| Chemotaxis protein CheY [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741404|gb|ACI20461.1| putative Chemotaxis protein CheY [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 124
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL VDD RK+I +L+ +V E+G ALQ LGL+ ++NLI+
Sbjct: 1 MKVLIVDDDKTTRKMISLILKSKGYEVVTAENGIEALQKLGLE-----------RINLIL 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
TD MP M G E +K+++ + +P+V++++E + E G ++Y+VKP
Sbjct: 50 TDMNMPYMDGIEFIKQVRANPDIANIPIVMITTEADEDEKRRAFEAGVDDYLVKP 104
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ + KV AV G +A + L G N FD LI+
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL--KGRPRN--FD-----LIL 95
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++GY LL I E + +PV++MSS+D ++ + C+ GA +Y+VKP+++++
Sbjct: 96 TEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINE 155
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL VD R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 60 KTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNS--------IDL 110
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 111 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL VD R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 60 KTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNS--------IDL 110
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 111 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 64 QRLVKEKKFKETNRGFPFWA--MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVT 121
+R V+ K E G W + +A L VL V+ R++I LL+ S +V
Sbjct: 28 RRRVQRKDAAEGGDGLVKWERFLPKIA-----LRVLLVEADDSTRQIISALLRKCSYRVA 82
Query: 122 AVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPV 181
AV G +A + L + E V+LI+ + +P ++GY LL I E V + +PV
Sbjct: 83 AVPDGLKAWEMLKGNPES---------VDLILAEVDLPSISGYALLTLIMEHDVCKNIPV 133
Query: 182 VIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
++MS+ D + + C+ +GA +Y+VKP++ ++
Sbjct: 134 IMMSTHDSVNTVYKCMLKGAADYLVKPLRRNE 165
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL VD R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 60 KTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNS--------IDL 110
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 111 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL VD R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 60 KTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNS--------IDL 110
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 111 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
>gi|427713660|ref|YP_007062284.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
gi|427377789|gb|AFY61741.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
Length = 600
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD +R L R LQ +V G +AL+ L S+ +D LI+ D
Sbjct: 193 ILVVDDVENNRVLFSRQLQRQGYEVDTAVDGYQALEKL------SHRAYD-----LILLD 241
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
Y MP + G+++L ++K R +PV+++S+ D + Q+ C+E GAE+Y+ KP+
Sbjct: 242 YMMPELNGFQVLSRLKSDQKLRHIPVIMISANDEIDQVIRCIEIGAEDYLPKPLN 296
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 71/120 (59%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ Y R++I LL+ S +V AV G A + L DG + ++LI+
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLK-DGPNN--------IDLIL 91
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++GY LL + E + +PV++MSS D ++++ C+ +GA ++++KPV+ ++
Sbjct: 92 TEVDLPLISGYALLTLVMEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNE 151
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R ++ LL+ S +VTAV +G A ++L N+ + V++
Sbjct: 75 KSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFL------ENLSNN---VDI 125
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP +TG LL KI + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 126 VLTEVVMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIR 184
>gi|398797682|ref|ZP_10557002.1| signal transduction histidine kinase [Pantoea sp. GM01]
gi|398102408|gb|EJL92589.1| signal transduction histidine kinase [Pantoea sp. GM01]
Length = 1195
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 79 FPFWAMATVAEC--------SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRAL 130
F F A A AE + +HVL VDD +R L+ + L++ +V A ESG +AL
Sbjct: 936 FYFSAEACAAETIALSADDDERSMHVLIVDDHSPNRLLLTQQLEMMGHQVIAAESGEQAL 995
Query: 131 QYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREV---PVVIMSSE 187
+ L S V D LI TD TMPGM G+EL + I++ + + P++ +++
Sbjct: 996 EIL-----HSGVAID-----LITTDVTMPGMDGFELTRHIRQWELQHNIASKPILGLTAH 1045
Query: 188 DVLTQIDSCLEEGAEEYIVKPVK 210
+ +D C E G E + KPV+
Sbjct: 1046 AQSSVVDKCREAGMNECLFKPVR 1068
>gi|94987584|ref|YP_595517.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|442556438|ref|YP_007366263.1| response regulator receiver protein [Lawsonia intracellularis N343]
gi|94731833|emb|CAJ55196.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|441493885|gb|AGC50579.1| response regulator receiver protein [Lawsonia intracellularis N343]
Length = 122
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ + + +VT E G L+ L + KV+LI++
Sbjct: 4 HILVVDDSKTVRNLMSFVFKSKGYQVTTAEDGLDGLEKL----------YSVDKVDLIVS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K ++E ++R +P++I+S+E I ++ GA Y+VKP +
Sbjct: 54 DINMPRMDGFTFIKSVREQDLYRNIPIIILSTEKEDEDIKKGMKFGANLYMVKPAQ 109
>gi|255323420|ref|ZP_05364551.1| Chemotaxis protein CheY homolog [Campylobacter showae RM3277]
gi|255299457|gb|EET78743.1| Chemotaxis protein CheY homolog [Campylobacter showae RM3277]
Length = 121
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ LQ + ++ E G A Q LG + S++ N++
Sbjct: 1 MKILVVDDSSTMRRIIKNTLQRLGHQEILEAEHGAEAWQILG---QHSDI-------NVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ + + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEAKYVDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S +V AV G +A + L E V+LI+
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPE---------SVDLIL 100
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++GY LL I E + + +PV++MS++D + + C+ +GA +Y+VKP++ ++
Sbjct: 101 TEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNE 160
>gi|46580478|ref|YP_011286.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120602202|ref|YP_966602.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|387153775|ref|YP_005702711.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
gi|46449897|gb|AAS96546.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120562431|gb|ABM28175.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|311234219|gb|ADP87073.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
Length = 122
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT E G L+ L + + V+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL----------YSSEGVDLIIS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K ++E +R +P+V++S+E I + GA Y+VKP +
Sbjct: 54 DVNMPRMDGFTFIKTVREQDTYRNLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQ 109
>gi|428302090|ref|YP_007140396.1| response regulator receiver protein [Calothrix sp. PCC 6303]
gi|428238634|gb|AFZ04424.1| response regulator receiver protein [Calothrix sp. PCC 6303]
Length = 146
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCK--VTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L V+DS D K+++RL+Q + + SG AL++L G +N + K ++I+
Sbjct: 9 LLIVEDSNEDFKILQRLMQRLDVQNPIYRCSSGDEALEFLERIGNDNNSDISS-KPSVIL 67
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D +PG+ G ++L +IK+ + F+E+PVVI ++ I+ C ++GA Y++KP+
Sbjct: 68 LDLNLPGIDGRDILSQIKQDNKFKEIPVVIFTTSSNPKDIELCYQKGANGYLIKPMN 124
>gi|376295008|ref|YP_005166238.1| response regulator receiver, CheY [Desulfovibrio desulfuricans
ND132]
gi|323457569|gb|EGB13434.1| response regulator receiver, CheY [Desulfovibrio desulfuricans
ND132]
Length = 122
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT E G L+ L + V+LI++
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL----------YSLSHVDLIVS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K ++E + +R++P+V++S+E I + L GA Y++KP +
Sbjct: 54 DVNMPRMDGLTFIKTVREQAAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMIKPAQ 109
>gi|88706905|ref|ZP_01104604.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
gi|88698827|gb|EAQ95947.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
Length = 495
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+LAVDD +R L+ R L S V SG AL+ L +N V++++ D
Sbjct: 143 ILAVDDREENRALLARYLTRSGHFVVTAPSGEEALEML------ANA-----DVDVVLLD 191
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM G E+L++IK R PV+++S E + I C++ GA++Y+ KP
Sbjct: 192 RMMPGMDGREVLRRIKAEPRLRATPVIMISGEQDMQGIIECIKAGADDYLFKP 244
>gi|424781512|ref|ZP_18208370.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Campylobacter showae
CSUNSWCD]
gi|421960798|gb|EKU12400.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Campylobacter showae
CSUNSWCD]
Length = 121
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ LQ + ++ E G A Q LG + S++ N++
Sbjct: 1 MKILVVDDSSTMRRIIKNTLQRLGHQEILEAEHGVEAWQILG---QHSDI-------NVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ + + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEAKYVDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>gi|22298565|ref|NP_681812.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
gi|22294745|dbj|BAC08574.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
Length = 871
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VL VDDS R+L++R+L+ + V G AL +L G+Q V+L+IT
Sbjct: 741 QVLIVDDSITVRRLLDRVLRQAGYNVVQCRDGKEALDFLLAAGDQ---------VSLVIT 791
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP + GY+LL+ I+ S+ R +PV +++S T L+ GA YI KP +
Sbjct: 792 DIEMPRLDGYDLLEAIRLSARLRHLPVAMLTSRGGDTHRQKALQLGANGYITKPFQ 847
>gi|386827615|ref|ZP_10114722.1| family 3 adenylate cyclase [Beggiatoa alba B18LD]
gi|386428499|gb|EIJ42327.1| family 3 adenylate cyclase [Beggiatoa alba B18LD]
Length = 545
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E +L VDD +R L+ R L V E+G +ALQ + A + +L+
Sbjct: 199 EARLLVVDDKESNRDLLSRRLDRQGFHVDIAENGLQALQKV-----------QAYRYDLV 247
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M G+++L IK R +PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 248 LLDIIMPEMNGFQVLAAIKSDPALRHLPVIMISALDEIDSVVHCIELGAEDYLQKP 303
>gi|398977249|ref|ZP_10687006.1| signal transduction histidine kinase [Pseudomonas sp. GM25]
gi|398138491|gb|EJM27512.1| signal transduction histidine kinase [Pseudomonas sp. GM25]
Length = 1071
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 47 PFAYSLTQTHNILTKTHQRLVKEKKFKETN-RGFPFWAMATVAECSKELHVLAVDDSYVD 105
P A T T ++ H + + + T+ G +A A ELHVL +D+ ++
Sbjct: 795 PLAPEHTSTGARVSAQHIQAIADGVLLATDPAGVALSPLAEAALPRLELHVLVAEDNLIN 854
Query: 106 RKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYE 165
+ +++ L+ C+VT +G +ALQ D FD ++++D MP M GYE
Sbjct: 855 QAILKEQLESLGCEVTVTGNGLQALQVWNQD------DFD-----VVLSDVNMPVMNGYE 903
Query: 166 LLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
L ++I+++ +VP++ +++ + + + C G ++VKP++L+D
Sbjct: 904 LTRQIRQTD--GQVPIIGITANAMRDEGERCESAGMSAWMVKPLRLTD 949
>gi|354581917|ref|ZP_09000820.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
gi|353200534|gb|EHB65994.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
Length = 1038
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD V+ +++E +L +T SG AL L D + +L+IT
Sbjct: 710 HLLIVDDDPVNLRVLEAILPTGEYDLTMATSGKEALALL-----------DRKEWDLVIT 758
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M+GYEL ++I+E E+P++++++ I S GA +Y+ KPV+
Sbjct: 759 DIMMPQMSGYELTRRIRERFTLTELPILLLTARSQPNDIQSGFMAGANDYVTKPVE 814
>gi|399090873|ref|ZP_10754188.1| signal transduction histidine kinase [Caulobacter sp. AP07]
gi|398027181|gb|EJL20743.1| signal transduction histidine kinase [Caulobacter sp. AP07]
Length = 855
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V+R++I+ L +C + V +G AL L +A +L++ D
Sbjct: 723 VLVVDDHPVNRRVIKLFLAPFNCDLVEVANGREALDAL-----------EAEAFDLVLMD 771
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP M G E ++++ + +PV+ ++++ + TQID+CL+ G + ++ KP+ L D
Sbjct: 772 VNMPVMDGLEATRRLRRDPRWAGLPVIALTADVMRTQIDTCLQAGMDAHVAKPIDLRD 829
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++L VL V+D R ++ LL+ +V +G +A L + N +++L
Sbjct: 40 RQLKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLL----DDRN-----REIDL 90
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++TD MPG++G LL KI ++VPVV+MSS D + CL +GA +++VKPV+
Sbjct: 91 VLTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVR 149
>gi|113477434|ref|YP_723495.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110168482|gb|ABG53022.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 351
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+VL VDD+ +R L+ R ++ +++ G +AL+ + N FD L++
Sbjct: 7 NVLVVDDNQFNRDLLARRVKRQGHMISSASDGFQALEMV------RNHSFD-----LVLL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M GY++L+ +K R +PV+++S+ D + I C+E GAE+Y+ KP
Sbjct: 56 DIMMPQMNGYQVLETLKADPALRHIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|16127305|ref|NP_421869.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
gi|221236107|ref|YP_002518544.1| hybrid sensor histidine kinase/receiver domain-containing protein
[Caulobacter crescentus NA1000]
gi|13424725|gb|AAK25037.1| sensor histidine kinase/response regulator [Caulobacter crescentus
CB15]
gi|220965280|gb|ACL96636.1| hybrid sensor histidine kinase/receiver domain protein [Caulobacter
crescentus NA1000]
Length = 850
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V+R++I L+ C++ E+G AL L + V+L++ D
Sbjct: 720 VLVVDDHPVNRRVIRLFLEPFECELVEAENGRHALDVLQHEA-----------VDLVLMD 768
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP M G E +++++ F +PVV ++++ + QI +CL+ G + ++ KP+ L +
Sbjct: 769 VNMPVMDGLEATRRLRQDPRFARLPVVALTADVMSAQIKTCLDAGCDAHVAKPIDLRN 826
>gi|281209484|gb|EFA83652.1| histidine kinase [Polysphondylium pallidum PN500]
Length = 1067
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 16/126 (12%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+ VL VDD+ V+R++ ++LQ C V V SG AL + + + ++I
Sbjct: 934 EMRVLVVDDNMVNRQVAYKMLQSMGCNVDVVSSGMEALDRI-----------EKVTYDMI 982
Query: 153 ITDYTMPGMTGYELLKKIKESSVFR-----EVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
D MPGM G+++ K+I+E + R +P++ M++ C+ G ++Y+ K
Sbjct: 983 FLDIMMPGMDGFQVTKEIRERELKRSNGTKHIPIIAMTANAFKEDEVKCINSGMDDYLSK 1042
Query: 208 PVKLSD 213
P+K+++
Sbjct: 1043 PIKITE 1048
>gi|206889988|ref|YP_002248238.1| chemotaxis protein histidine kinase CheA, [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741926|gb|ACI20983.1| chemotaxis protein histidine kinase CheA, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 742
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS RK ++ +L+ +V + G AL L + KV++++TD
Sbjct: 624 VLVVDDSISVRKTLQSVLEAKKLRVYTAKDGVEALNLLERN-----------KVDMVVTD 672
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M GYEL+ ++++ + F+ +P+++++S + E GA+ YIVKP
Sbjct: 673 LEMPVMHGYELISRLRKDARFKNLPIIVLTSRGTKKHEEKAFELGADGYIVKP 725
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K ++VL V+ R+++ LL+ +V + E+G +A YL + +Q+N+ ++
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL--EDKQNNI-------DI 128
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ + MPG++G LL +I ++ + +PV++MSS D + CL +GA +++VKP++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIR 187
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K ++VL V+ R+++ LL+ +V + E+G +A YL + +Q+N+ ++
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL--EDKQNNI-------DI 128
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ + MPG++G LL +I ++ + +PV++MSS D + CL +GA +++VKP++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIR 187
>gi|159080916|gb|ABW87920.1| CheY [Campylobacter rectus]
gi|159080918|gb|ABW87921.1| CheY [Campylobacter rectus]
Length = 121
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ LQ + ++ E G A Q LG + S++ N++
Sbjct: 1 MKILVVDDSSTMRRIIKNTLQRLGHQEILEAEHGVEAWQILG---QHSDI-------NVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEQKYVDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 70/117 (59%), Gaps = 11/117 (9%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
+ DDS R++I LL+ S +VTAV G +A + L G N+ +LI+T+
Sbjct: 67 IEADDST--RQIIGALLRKCSYRVTAVPDGLKAWEIL--RGRPHNI-------DLILTEV 115
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+P ++G+ LL I E + + +PV++MS++D ++ + C+ GA +Y+VKP++ ++
Sbjct: 116 DLPAISGFALLTLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNE 172
>gi|90020314|ref|YP_526141.1| response regulator receiver domain-containing protein [Saccharophagus
degradans 2-40]
gi|89949914|gb|ABD79929.1| GGDEF domain [Saccharophagus degradans 2-40]
Length = 1526
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
++ ++ H+L VDD V+RK++ L + V V SG A+ Y+ +
Sbjct: 1138 SDTARTYHILIVDDEPVNRKVLANYLSLKYYTVHEVRSGMEAITYV----------RNGP 1187
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
KV+LI+ D MP M+GYE K++++ E+P++++++ ++ + + GA ++I K
Sbjct: 1188 KVDLILLDIMMPKMSGYEACKQLRQQYSANELPIILLTARSQVSDLVTGFNSGANDFITK 1247
Query: 208 PV 209
P+
Sbjct: 1248 PI 1249
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K ++VL V+ R+++ LL+ +V + E+G +A YL + +Q+N+ ++
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL--EDKQNNI-------DI 128
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ + MPG++G LL +I ++ + +PV++MSS D + CL +GA +++VKP++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIR 187
>gi|116620668|ref|YP_822824.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223830|gb|ABJ82539.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 148
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISS--CKVTAVESGTRALQYLGLDGEQSNVGF-DAL 147
S+ + +L V+D+ D +L+ER + S ++ VE G +AL YL + G+ D++
Sbjct: 7 SRPIEILLVEDNAADAQLVERAFRFSRTPVRLYVVEDGVQALDYL-----RRTAGYTDSV 61
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+ +LI+ D +PG G+++LK++K +EVPVVI S + + G YI K
Sbjct: 62 RPDLIMLDLNLPGRDGHQVLKELKNDPDLKEVPVVIYSGSAMQRDVKLAYRLGGNCYIRK 121
Query: 208 PVKLSD 213
PV L +
Sbjct: 122 PVDLEE 127
>gi|413924848|gb|AFW64780.1| hypothetical protein ZEAMMB73_536209 [Zea mays]
Length = 122
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 161 MTGYELLKKIKESSVFREVPVVIMSSEDVLTQID--SCLEEGAEEYIVKPVKLSD 213
M GY+LL+K+K+SS R++PVVIMSSE+ ++I+ CLEEGA+E +KPV+LSD
Sbjct: 1 MPGYDLLRKVKDSSSLRDIPVVIMSSENNPSRINRTRCLEEGADESFLKPVRLSD 55
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+++V+ VDD +V ++ R+LQ S +V AV+ +AL L + + ++LI
Sbjct: 15 KINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRD---------NIDLI 65
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGM G +L K+I + F +PV++MSS+ + + L GA +I KP+ +
Sbjct: 66 ITDYYMPGMNGLQLKKQITQE--FGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPT 121
Query: 213 D 213
D
Sbjct: 122 D 122
>gi|428212579|ref|YP_007085723.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
gi|428000960|gb|AFY81803.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
Length = 354
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD +R L+ R L+ V E G +AL+ + A +L++ D
Sbjct: 8 VLVVDDVEANRDLLCRRLKRQGYHVKIAEDGLKALELI-----------RAEPFDLVLLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + GY++L++IK S R +PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 57 IMMPHLNGYQVLEEIKADSSLRHIPVIMISAVDDIDSVVKCIELGAEDYLSKP 109
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 69.7 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R ++ LL+ +V + E+G A QYL + Q+ +++L
Sbjct: 81 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL--EDVQN-------RIDL 131
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI S+ + +PV++MS D ++ + CL +GA +++VKP++
Sbjct: 132 VLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 190
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V R+++ +LL+ +V AVE G +AL+ L +G +L++ D
Sbjct: 92 VLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVLREEGNN---------YHLLLVD 142
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MP M G +LLK +++ ++P++++SS + I+ C + GAE+++ KPV+L
Sbjct: 143 VLMPDMDGLQLLKIFRQA-YSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQL 197
>gi|119898694|ref|YP_933907.1| two-component response regulator [Azoarcus sp. BH72]
gi|119671107|emb|CAL95020.1| probable two-component response regulator [Azoarcus sp. BH72]
Length = 301
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD ++RKL+ LL+ V +SG +AL+ + D V+LI+ D
Sbjct: 8 ILVVDDERINRKLLSELLE-EHHDVVIAKSGEQALERVQADS----------AVDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM+G+++L+++K S ++VPV+ ++S + + + L+ GA +YI KP
Sbjct: 57 VVMPGMSGHDVLRRLKASDATKDVPVIFITSLNSVDDEEIGLDLGAADYITKP 109
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+ R ++ LL+ S V AV G +A + E+ N FD +
Sbjct: 71 RSLRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIV----EEKNFNFD-----I 121
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
I+++ +P +G LL KI + + R +PV++MSS+D ++ + C+++GA +++VKPV+
Sbjct: 122 ILSEVEVPSFSGINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVR 180
>gi|254227634|ref|ZP_04921065.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262395682|ref|YP_003287535.1| sensory box sensor histidine kinase/response regulator [Vibrio sp.
Ex25]
gi|151939676|gb|EDN58503.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262339276|gb|ACY53070.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio sp. Ex25]
Length = 873
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +DS+++R LIE++LQ + K+T E G A++ + L +L+I
Sbjct: 741 LHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSPDLVI 789
Query: 154 TDYTMPGMTGYELLKKIK---ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD +MP G+ + K I+ ES F P+V S+ + Q + G ++Y+ KPV+
Sbjct: 790 TDISMPNKDGFGVTKDIRELQESGAFPWCPIVAFSAHAMQEQQQKSIALGMDDYLTKPVQ 849
Query: 211 LSD 213
SD
Sbjct: 850 KSD 852
>gi|297568710|ref|YP_003690054.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924625|gb|ADH85435.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 530
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A+ + + ++ +L VDD +R+++ R L+ V E+G +AL L
Sbjct: 158 ALQAIDDRGEKPLILVVDDITANREVLSRRLRRLGYLVMEAENGRQALAML------ETG 211
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
FD L++ D MP + GYE+L++IK + + R VPV+++S+ + + CLE GA+
Sbjct: 212 AFD-----LVLLDILMPELDGYEVLRRIKANELIRHVPVLMISAVGDINSVVRCLEAGAD 266
Query: 203 EYIVKP 208
+Y+ KP
Sbjct: 267 DYLAKP 272
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 59 KTIKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNS--------IDL 109
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 110 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 168
>gi|413915888|gb|AFW55820.1| hypothetical protein ZEAMMB73_931489 [Zea mays]
Length = 157
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
MA VA HVLAVDDS DRKLIERLL+ SS +VT V+SG++ALQ+LGL + S V
Sbjct: 60 MAAVAT-ETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTV- 117
Query: 144 FDALKVNLIITDYTMPGMTGYELLKK 169
+ + ++ +P + YEL+ +
Sbjct: 118 -PPVHTHQLVRRRWLPLPSSYELVGQ 142
>gi|386817120|ref|ZP_10104338.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
gi|386421696|gb|EIJ35531.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
Length = 792
Score = 69.3 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD ++R LL + TAV+SG A+ L EQ FD LI
Sbjct: 670 HILLVDDDEMNRFFGRELLNRLNATTTAVDSGAEAIHQL----EQHT--FD-----LIFM 718
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +MP M GYE +KI+ F ++P++ +++ + + + CL+ G +Y+ KP L D
Sbjct: 719 DVSMPEMDGYETTRKIRTDPRFAKLPIIALTAHAITGEKERCLDAGMNDYLTKPFALVD 777
>gi|153812170|ref|ZP_01964838.1| hypothetical protein RUMOBE_02567 [Ruminococcus obeum ATCC 29174]
gi|149831825|gb|EDM86911.1| response regulator receiver domain protein [Ruminococcus obeum ATCC
29174]
Length = 502
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
K +L VDDS ++R +++ +L + + A E+G +A+Q +G N+G D
Sbjct: 2 DKRQKILIVDDSKLNRDILKEILGDAYNYLEA-ENGNQAIQRIG-----ENIGID----- 50
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
L++ D MP M G+E+LK +K S E PV+++SSED + + E G +YI +P
Sbjct: 51 LMLLDINMPQMNGFEVLKIMKRSQCIAETPVIMISSEDAVDTMRKAYELGITDYITRP 108
>gi|149376372|ref|ZP_01894135.1| Signal transduction histidine kinase [Marinobacter algicola DG893]
gi|149359386|gb|EDM47847.1| Signal transduction histidine kinase [Marinobacter algicola DG893]
Length = 756
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
+AT A S+ L++L V+D+ V++ + +L+ VT E+G +AL+ L +Q
Sbjct: 620 IATPAVVSRALNLLLVEDNQVNQVVASSMLKKLGHTVTLAENGKQALEAL----QQGEGK 675
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
FD +++ D MP M GYE + I+E+ +R +PV+ +++ + D C+E G +
Sbjct: 676 FD-----IVLMDCQMPVMDGYEATRTIRENPEWRNLPVIAVTANVMQGDRDDCIESGMND 730
Query: 204 YIVKPVKLSD 213
YI KP +D
Sbjct: 731 YITKPYNRAD 740
>gi|77361535|ref|YP_341110.1| two-component response regulator [Pseudoalteromonas haloplanktis
TAC125]
gi|76876446|emb|CAI87668.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis TAC125]
Length = 299
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
SK+ VL VDD ++R ++E+ L +V V+SG AL ++ +V+
Sbjct: 2 SKKAKVLIVDDDALNRIVLEKTLS-DEHEVFLVKSGDEALTFI-----------KTTQVD 49
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
LII D MPGM GYE+L K+KE S + +PV+ +S+ LE GA +YI KP
Sbjct: 50 LIILDIVMPGMNGYEVLVKLKEDSATQMIPVIFISANSSHDDESKGLELGAMDYITKP 107
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+ R+++ LL+ +V AV G +A + + FD L
Sbjct: 42 RSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVM----RERAYAFD-----L 92
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ TMP ++G ELL +I S + +PV++MSS+D + + C+++GA +++VKPV+
Sbjct: 93 VLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVR 151
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + VL V+D R ++ LL+ S +VTAV +G +A + L E G D L
Sbjct: 88 RSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVL----EDPENGID-----L 138
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++T+ MP ++G LL KI + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 139 VLTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRR 198
Query: 212 SD 213
++
Sbjct: 199 NE 200
>gi|144897731|emb|CAM74595.1| Response regulator receiver domain protein (CheY) [Magnetospirillum
gryphiswaldense MSR-1]
Length = 148
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTA--VESGTRALQYLGLDGEQSNVGFD 145
H+L V+DS VD L L+ + V+ V G AL YL G+ D
Sbjct: 3 GHIDTHFHILLVEDSQVDAHLTRAALEENRFAVSMHHVTDGIEALDYLRQQGQNFT---D 59
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
L+ +LI+ D MP M G E L +K ++PVVI+++ DV + + + GA Y+
Sbjct: 60 GLRPDLILLDLNMPRMNGREFLTAMKADPNLSDIPVVILTTSDVEQDVIASYKLGAAGYV 119
Query: 206 VKPVKL 211
KPV L
Sbjct: 120 TKPVDL 125
>gi|113476924|ref|YP_722985.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110167972|gb|ABG52512.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1207
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E +L VDD V+ L+ L + + +V +G +AL L D +LI
Sbjct: 738 EFQILIVDDEPVNLTLLSNQLSLHNYQVIQANNGQKALDILAQD----------FLPDLI 787
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MPGMTGYE+ +K++E+ + ++P++++++++ ++ + LE GA +Y+ KP
Sbjct: 788 LLDVMMPGMTGYEVTQKVRETWLLHQLPIIMLTAKNRVSDLVMGLEVGANDYLSKP 843
>gi|329908335|ref|ZP_08274848.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Oxalobacteraceae
bacterium IMCC9480]
gi|327546732|gb|EGF31677.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Oxalobacteraceae
bacterium IMCC9480]
Length = 152
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 91 SKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+ EL+ L VDD R++I LL +I K+ E G AL+ L Q++ + +
Sbjct: 19 ASELNFLVVDDFSTMRRIISGLLKEIGHSKIHEAEDGAAALRLL--QSAQTH----GVPI 72
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ +ITD+ MP M G ELLK+I+ +PV+++++E I + GA+ YIVKP
Sbjct: 73 DFVITDWNMPVMDGLELLKRIRLDPALNHLPVLMVTAESKKENIIAAAHAGADGYIVKP 131
>gi|428309356|ref|YP_007120333.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428250968|gb|AFZ16927.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 971
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 76 NRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL 135
N P +A + + +L +L VDD ++ +++ L + + + SG AL+ +
Sbjct: 560 NESPPPELLAPIVQSEGQLTILVVDDEAINLQVVANHLSLQNYGIVQASSGIEALEKI-- 617
Query: 136 DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
+ L+ +LI+ D MP M+GY++ +KI+E E+PVV++++++ ++ + +
Sbjct: 618 --------HNGLRPDLILLDIMMPKMSGYQVCQKIREQFPASEMPVVMLTAKNQVSNLVA 669
Query: 196 CLEEGAEEYIVKPV 209
L+ GA +Y+ KP+
Sbjct: 670 GLDAGANDYLTKPI 683
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 143 GFDALK-------VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS 195
G DA++ +++++TD MP M G LL ++ E + VI+S+ + I
Sbjct: 39 GVDAIEKLQTEPDIDMVLTDINMPQMDGLALLTRLSEQH--PTIKTVILSAYGDIENIRK 96
Query: 196 CLEEGAEEYIVKPVKLSD 213
+ GA +++ KP+ D
Sbjct: 97 AMNLGAFDFLTKPIDFQD 114
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K ++VL V+ R+++ LL+ +V + E+G +A YL + +Q+N+ ++
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL--EDKQNNI-------DI 128
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ + MPG++G LL +I ++ + +PV++MSS D + CL +GA +++V P++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIR 187
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDD ++ +L+ S +V V++ AL L + S+ FD L+I
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSL----QSSDGAFD-----LVI 71
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TD MPGM G +L K+I E ++PVVIMSS+ + I LE GA Y+VKPV L D
Sbjct: 72 TDLHMPGMNGIQLQKQIDEEF---KIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRD 128
>gi|78356619|ref|YP_388068.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78219024|gb|ABB38373.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 123
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ +VT E G L+ L E++ V+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFRVTMAEDGLDGLEKL-YSAEET--------VDLIIS 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K ++E +R++P+V++S+E I + GA Y+VKP +
Sbjct: 55 DVNMPRMDGFTFIKTVREQDTYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQ 110
>gi|328951840|ref|YP_004369174.1| adenylate/guanylate cyclase [Desulfobacca acetoxidans DSM 11109]
gi|328452164|gb|AEB07993.1| adenylate/guanylate cyclase [Desulfobacca acetoxidans DSM 11109]
Length = 357
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
++L VDD+ ++R ++ R L+ + E+G +AL L EQ FD LI+
Sbjct: 16 YILVVDDNRMNRLMLARGLEKQGHQAAFAENGRQALAMLA---EQD---FD-----LILL 64
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M GY++L + + +R++PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 65 DIEMPEMNGYQVLDHLAANVRWRDLPVIMISAVDEIDSVVRCIELGAEDYLTKP 118
>gi|430743735|ref|YP_007202864.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Singulisphaera acidiphila DSM 18658]
gi|430015455|gb|AGA27169.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Singulisphaera acidiphila DSM 18658]
Length = 150
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 14/123 (11%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYL-GLDGEQSNVGFDALKV 149
+ H+L V+DS D +IER L + ++T + G +A+ YL L +S+ G L+
Sbjct: 4 DFHILLVEDSRADVMIIERALHDGNVPHRLTVIHDGRKAIDYLVRLRDVKSDPG---LEP 60
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS----EDVLTQIDSCLEEGAEEYI 205
+LI+ D +PG+ GY++L +IK + R +PVV++++ EDVL + GA YI
Sbjct: 61 DLILLDLNLPGIDGYQVLTQIKNDPLLRIIPVVVLTTSLRDEDVL----QTYQAGANTYI 116
Query: 206 VKP 208
KP
Sbjct: 117 QKP 119
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R+++ LL+ +V E+G A +YL + Q+N+ +L
Sbjct: 81 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL--EDLQNNI-------DL 131
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI + +++PV++MS+ D ++ + CL +GA +++VKP++
Sbjct: 132 VLTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLR 190
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+HVL +D R + +L + +VTAVE+G A L + SN+ ++++
Sbjct: 3 IHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELL--KQDSNI-------DIVL 53
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP M G+ELL ++E +++PV++MSS+ ++ +C+ +GA++YI KP+++ +
Sbjct: 54 LDLYMPEMDGFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQN 113
>gi|337285567|ref|YP_004625040.1| response regulator receiver protein [Thermodesulfatator indicus DSM
15286]
gi|335358395|gb|AEH44076.1| response regulator receiver protein [Thermodesulfatator indicus DSM
15286]
Length = 125
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIER-LLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ VL VDD R++I+ LLQ+ + + GT A + L GE KV+LI
Sbjct: 5 MKVLVVDDFATMRRIIKNILLQLGFKNIIEADDGTTAWEILN-KGE---------KVDLI 54
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+D+ MP MTG ELLKK++ F+++P +++++E I ++ +YIVKP
Sbjct: 55 ISDWNMPKMTGIELLKKVRSDDRFKDIPFLMVTAEAQKENIIEAVKYKVSQYIVKP 110
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++ +L DD V RK++ LL+ VT V +G A +Y+ G+Q K +L+
Sbjct: 159 KVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYIN-KGQQ--------KYDLV 209
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV-LTQIDSCLEEGAEEYIVKPV 209
+TD MP +TG++LL++I + V R +PV++MS V + ++ G ++++ KP+
Sbjct: 210 LTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 267
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R+++ LL+ +V E+G A +YL + Q+N+ +L
Sbjct: 81 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL--EDLQNNI-------DL 131
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI + +++PV++MS+ D ++ + CL +GA +++VKP++
Sbjct: 132 VLTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLR 190
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
Query: 100 DDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMP 159
+D R ++ LL+ + +VT+V +G+ A L E++N FD L++TD MP
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLL----EEANSNFD-----LVLTDVVMP 239
Query: 160 GMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++G +L K+ + + VP+VIMSS D L + CL +GA +Y+VKPV+
Sbjct: 240 CLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVR 290
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
Query: 100 DDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMP 159
+D R ++ LL+ + +VT+V +G+ A L E++N FD L++TD MP
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLL----EEANSNFD-----LVLTDVVMP 239
Query: 160 GMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++G +L K+ + + VP+VIMSS D L + CL +GA +Y+VKPV+
Sbjct: 240 CLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVR 290
>gi|334340222|ref|YP_004545202.1| PAS sensor protein [Desulfotomaculum ruminis DSM 2154]
gi|334091576|gb|AEG59916.1| PAS sensor protein [Desulfotomaculum ruminis DSM 2154]
Length = 1276
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
++VL V+D+ ++KLIE LL KVT VE+G AL L D + ++++
Sbjct: 1053 VNVLLVEDNSFNQKLIEHLLTGDGYKVTMVENGQEALAAL-----------DQGEYDIVL 1101
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP M GYE ++I+ ++++PV+ +++ + + CL G ++Y+ KPV
Sbjct: 1102 MDMQMPVMDGYEATRQIRNMEKYKKLPVIALTAHAMKGDCEKCLSAGCDDYLAKPV 1157
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
++E VL ++D + ++LI L+ + V A + G +AL + + +
Sbjct: 791 TREGVVLVIEDDWTTKQLITNYLEKAGYTVIATDHGKQALTLAKI-----------YQPD 839
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
II D +P ++G+++L K+K++ +++PV++ S VL + + GA +YI KP+
Sbjct: 840 AIILDILLPDLSGWDILVKMKKTEEIQQIPVIVCS---VLPEKERAFSLGAVDYIEKPI 895
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
T++ S++ H++ VDD + + +++ + K AL ++ F
Sbjct: 908 TLSRTSEDTHIILVDDDKTALEFLRCVIEGAGFKPHPFMLAQEALDFI----------FR 957
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
V+ +I D MPGM G++ L ++ + F+ +PV+I + +D LTQ D
Sbjct: 958 HEPVHAVILDLLMPGMDGFDFLDHLRSNPKFKSLPVLINTGKD-LTQQD 1005
>gi|239905594|ref|YP_002952333.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239795458|dbj|BAH74447.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 139
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 12/118 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
E HVL VDD+ R +I+ +L+ I ++ E+G+ A L L ++L
Sbjct: 14 EYHVLIVDDAVPMRNMIKFMLKKIGFNTLSEAENGSEAFGLL-----------KKLTIDL 62
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
++ D+ MP + GY+LL+KI+ + +PV+I+S E I S + GA +Y++KP+
Sbjct: 63 VVADWNMPKLNGYQLLEKIRADESLKYLPVIIVSGEGDKEHIVSIIRAGASDYVLKPI 120
>gi|428217824|ref|YP_007102289.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
gi|427989606|gb|AFY69861.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
Length = 334
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 12/118 (10%)
Query: 92 KELHVLAVDDSYVDRKLIER-LLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
++ ++L VDD+ ++R ++ R L++ ++ A E+G AL+ L S FD
Sbjct: 5 EDFNLLIVDDNEMNRDVLRRHLVRQGYQQILAAENGKEALEML------SGHNFD----- 53
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
LI+ D MP M GYELL +K +PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 54 LILLDIQMPQMNGYELLAYLKADLKLSHIPVIMISAVDEIDSVVRCIEMGAEDYLHKP 111
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 73/127 (57%), Gaps = 12/127 (9%)
Query: 85 ATVAECSKELHVLAVDDSYVDRKLIERLLQISS-CKVTAVESGTRALQYLGLDGEQSNVG 143
+T+ KE+ +L VDD R ++ +LL+ + +V VESG +A++ + N
Sbjct: 3 STLGWHPKEIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELI------ENRS 56
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
F NL++ D MP + G ++K +++ + + P+V+MS+ + L + CL EGA++
Sbjct: 57 F-----NLVLCDLHMPDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADD 111
Query: 204 YIVKPVK 210
Y++KP++
Sbjct: 112 YLLKPIQ 118
>gi|223935181|ref|ZP_03627099.1| response regulator receiver protein [bacterium Ellin514]
gi|223896065|gb|EEF62508.1| response regulator receiver protein [bacterium Ellin514]
Length = 212
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 84 MATVAECSKELH-----------VLAVDDSYVDRKLIERLLQISS--CKVTAVESGTRAL 130
+A + +C + L +L +DDS D +++ + C VT + G A+
Sbjct: 54 IAIIIKCRRRLEPYVYCLAIMKSILLIDDSEDDVFFMKQAIDTGQFPCNVTVLRQGEDAI 113
Query: 131 QYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
QYL EQ ++ ++II D MPGM G+E+L I+ FR +PVV+++ +
Sbjct: 114 QYLATAAEQVSLP------DIIILDVKMPGMDGHEVLNWIRTRPKFRHIPVVMLTISNFD 167
Query: 191 TQIDSCLEEGAEEYIVKPVK 210
D GA Y+VKP K
Sbjct: 168 RDKDRAYHLGANSYLVKPRK 187
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R+++ LL+ +V + E+G A QYL + Q+ +++L
Sbjct: 80 KTLRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYL--EDLQN-------RIDL 130
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI + +++PV++MS D + + CL +GA +++VKP++
Sbjct: 131 VLTEVAMPCLSGISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIR 189
>gi|427415954|ref|ZP_18906137.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
gi|425758667|gb|EKU99519.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
Length = 348
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD +IE L ++ Y GE + V DA K +LI+ D
Sbjct: 6 ILVIDDEVSHFDIIEALFNRQDYQL-----------YYAASGEDAIVSLDAFKPDLILLD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPG++G E+ ++IK S ++ VP+++++ D T + SC+ GA++++ KPV
Sbjct: 55 VLMPGISGIEVCRRIKASPQWQNVPIIVVTILDTRTTVTSCINAGADDFLTKPV 108
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 18/122 (14%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++H+L VDD V RK++E L+ VT V +G A L ++G N +D L+
Sbjct: 180 KVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNIL-ING---NTKYD-----LV 230
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID-----SCLEEGAEEYIVK 207
+TD MP ++G++LL++I + + + VPV++MS T ID ++ G ++++ K
Sbjct: 231 LTDVMMPNISGFDLLQRINDHAEIKNVPVILMSG----TAIDYKYANDTIKIGGQDFLTK 286
Query: 208 PV 209
P+
Sbjct: 287 PI 288
>gi|376003885|ref|ZP_09781685.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
gi|375327705|emb|CCE17438.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
Length = 352
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD+ ++R L+ R LQ V +G AL+ + + ++L++ D
Sbjct: 8 VLIVDDNEINRDLLARRLQRQGYDVLVASNGFEALKIM-----------RSTALDLVLLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M GY++L+ +K R +PV+++S+ + + I C+E GAE+Y+ KP
Sbjct: 57 IMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 109
>gi|451971331|ref|ZP_21924551.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio alginolyticus E0666]
gi|451932693|gb|EMD80367.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio alginolyticus E0666]
Length = 873
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +DS+++R LIE++LQ + K+T E G A++ + L +L++
Sbjct: 741 LHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSPDLVM 789
Query: 154 TDYTMPGMTGYELLKKIK---ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD +MP G+ + K I+ ES F P+V S+ + Q + G ++Y+ KPV+
Sbjct: 790 TDISMPNKDGFGVTKDIRELQESGAFPWCPIVAFSAHAMQEQQQKSIALGMDDYLTKPVQ 849
Query: 211 LSD 213
SD
Sbjct: 850 KSD 852
>gi|209528443|ref|ZP_03276873.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|423063642|ref|ZP_17052432.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
gi|209491122|gb|EDZ91547.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|406715074|gb|EKD10232.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
Length = 352
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD+ ++R L+ R LQ V +G AL+ + + ++L++ D
Sbjct: 8 VLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM-----------RSTALDLVLLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M GY++L+ +K R +PV+++S+ + + I C+E GAE+Y+ KP
Sbjct: 57 IMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 109
>gi|374605314|ref|ZP_09678247.1| sensor protein [Paenibacillus dendritiformis C454]
gi|374389073|gb|EHQ60462.1| sensor protein [Paenibacillus dendritiformis C454]
Length = 1015
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 46 FPFAYSLTQTHNIL---TKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVLAVDDS 102
F F L QT + + K L++ ++ G P + +A + +++LAVDD
Sbjct: 638 FTFTLPLAQTASPVWKRGKAEPALLRSRRTSLPAPGVPN-SSPEMAAAADGMNILAVDDD 696
Query: 103 YVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMT 162
V+ ++ LL V ++G ++ D + +LI+ D MP M+
Sbjct: 697 PVNLNILTNLLFAEGYNVAT-----------AMNGREAAAMLDQKRWDLIVADVMMPHMS 745
Query: 163 GYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
GYEL + ++E E+PV+++++ IDS GA +Y+ KPV+
Sbjct: 746 GYELTRAVRERFSMSELPVLLLTARSRAEDIDSGFRAGANDYVTKPVE 793
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ KV A G +A + L N FD ++LI+
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETL------KNKAFD---LDLIL 83
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E + + +PV++MSS D ++ + C+ +GA ++++KPV+
Sbjct: 84 TEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVR 140
>gi|242278764|ref|YP_002990893.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
gi|242121658|gb|ACS79354.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
Length = 822
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L V+DS +E +L KV+ V +G ALQ L + V+L+I+
Sbjct: 5 HILVVEDSLTQAVKLEYILFEKGFKVSLVSNGENALQLL-----------EDKDVDLVIS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MPGM GYEL +KI+++S +++VPV++++S I L+ GA ++ KP
Sbjct: 54 DVVMPGMDGYELCEKIRKNSRYKDVPVILLTSLSEPGDIIKGLKSGATNFVTKP 107
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL-GLDGEQSNVGFD 145
++ S E +L V+D+ ++ + LL+ V +G A+ L G+D
Sbjct: 570 LSAVSAEYSILLVEDNPINVLVATSLLEKMGHSVEVASNGLEAVSMLSGID--------- 620
Query: 146 ALKVNLIITDYTMPGMTGYEL---LKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
V+L++ D MP M G+ +++ + R VP++ M++ + D C + G
Sbjct: 621 ---VDLVLMDLEMPEMDGFSASMSIRRGRAGDAARNVPIIAMTAHAMTGVKDKCAKAGMN 677
Query: 203 EYIVKPVKLSD 213
+YI KPV+ D
Sbjct: 678 DYIAKPVQYVD 688
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL VDD R ++ LL+ +VTAV +G +A + L G +++L++
Sbjct: 86 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGN---------RIDLVL 136
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ MP ++G LL KI + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 137 TEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIR 193
>gi|309791654|ref|ZP_07686146.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG-6]
gi|308226276|gb|EFO80012.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6]
Length = 848
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD+ ++R+++ R L+ +VT V G Y LD S+ FD L++
Sbjct: 167 HLLLVDDNDMNREMLSRRLERMDYQVTQVNDG-----YPALDALHSH-SFD-----LVLL 215
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MPG+ GY +L+ +++ R VPV+++S+ D + + +E GA++Y+ KP
Sbjct: 216 DIMMPGLDGYAVLRAMRDDVDLRHVPVIVLSALDDIASVVQAIELGADDYLPKP 269
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL VDD R ++ LL+ +VTAV +G +A + L G +++L++
Sbjct: 74 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGN---------RIDLVL 124
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ MP ++G LL KI + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 125 TEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIR 181
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ Y R++I LL+ KV AV G A + L E+S+ ++LI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLK---EKSH------NIDLIL 87
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL + E + +PV++MSS+D + + C+ GA +Y++KP++
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMR 144
>gi|359454385|ref|ZP_09243669.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20495]
gi|414070269|ref|ZP_11406256.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. Bsw20308]
gi|358048556|dbj|GAA79918.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20495]
gi|410807367|gb|EKS13346.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. Bsw20308]
Length = 299
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
SK+ VL VDD ++R ++E+ L+ V VESG +AL ++ +V+
Sbjct: 2 SKKAKVLIVDDDPLNRLVLEKTLK-GEHDVFLVESGEKALTFV-----------KTTQVD 49
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LII D MPG+ GYE+L ++KE+ + + +P++ +S+ LE GA +YI+KP
Sbjct: 50 LIILDVVMPGIDGYEVLVQLKENPITQSIPIIFISANQSHEDESKGLELGAMDYIIKPFS 109
Query: 211 LS 212
S
Sbjct: 110 AS 111
>gi|330936571|ref|XP_003305441.1| hypothetical protein PTT_18287 [Pyrenophora teres f. teres 0-1]
gi|311317524|gb|EFQ86457.1| hypothetical protein PTT_18287 [Pyrenophora teres f. teres 0-1]
Length = 1259
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 73/126 (57%), Gaps = 10/126 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD--ALKVNL 151
LHVL V+D+ V++K++ + L + C V+ ++G AL++L E++N+ D + +++
Sbjct: 1124 LHVLVVEDNLVNQKVLCKQLTKAGCNVSTADNGVWALKHL----EKTNLRVDTNGIPLSI 1179
Query: 152 IITDYTMPGMTGYELLKKIKE----SSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
I+ D MP M G +KI+E + + VP++ +++ QID+ E G +E I K
Sbjct: 1180 ILIDCEMPEMDGLTCCRKIREMEQNGKLTKHVPIIAVTANIRGGQIDTAKEAGMDEVIGK 1239
Query: 208 PVKLSD 213
P ++ D
Sbjct: 1240 PFRIPD 1245
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K ++VL V+ R+++ LL+ +V + E+G +A YL + +Q+N+ ++
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL--EDKQNNI-------DI 128
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ + MPG++G LL +I ++ + +PV++MSS D + CL +GA +++V P++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIR 187
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K ++VL V+ R+++ LL+ +V + E+G +A YL + +Q+N+ ++
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL--EDKQNNI-------DI 128
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ + MPG++G LL +I ++ + +PV++MSS D + CL +GA +++V P++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIR 187
>gi|186681656|ref|YP_001864852.1| response regulator receiver protein [Nostoc punctiforme PCC 73102]
gi|186464108|gb|ACC79909.1| response regulator receiver protein [Nostoc punctiforme PCC 73102]
Length = 157
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 77/130 (59%), Gaps = 11/130 (8%)
Query: 91 SKELH--VLAVDDSYVDRKLIERLLQISSCK--VTAVESGTRALQYLGLDGEQSNVGFD- 145
+K+LH +L V+DS D ++++RL+++ S + + +G L++L G ++ +
Sbjct: 2 TKKLHEPLLVVEDSNEDFRMLQRLMRLMSVQNPIHRCTNGDEVLEFLYQQGSDAHSKGEN 61
Query: 146 ------ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
AL+ ++I+ D +PG+ G ++L ++K+ F+E+P+V+ ++ I+ C ++
Sbjct: 62 LPNSKVALRPSVILLDLNLPGIDGRDILDRLKQDKSFKEIPIVVFTTSSNPKDIELCYQK 121
Query: 200 GAEEYIVKPV 209
GA Y+VKP+
Sbjct: 122 GANGYLVKPM 131
>gi|359440992|ref|ZP_09230900.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20429]
gi|392533411|ref|ZP_10280548.1| two-component response regulator [Pseudoalteromonas arctica A
37-1-2]
gi|358037189|dbj|GAA67149.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20429]
Length = 299
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
SK VL VDD ++R ++E+ L++ V VESG +AL ++ +V+
Sbjct: 2 SKRAKVLIVDDDPINRLVLEKTLKVEH-DVFLVESGEKALTFV-----------KTAQVD 49
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
LII D MPG+ GYE+L ++KE+ + + +PV+ +S+ LE GA +YI KP
Sbjct: 50 LIILDVIMPGIDGYEVLVQLKENPITQSIPVIFISANRSHDDEAKGLELGAMDYITKP 107
>gi|443318409|ref|ZP_21047662.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442781999|gb|ELR92086.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 1182
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+++ +L VDD V+R++I L + S +VT +G AL L + L +
Sbjct: 782 ARQFLILVVDDEPVNRQVIVNHLSVHSYRVTQASNGPEALAMLS----------NGLLPD 831
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
LI+ D MP MTGYE+ ++++E +P+V++++++ + + L GA +Y+ KPV
Sbjct: 832 LILLDVMMPRMTGYEVCRQVREQHPAYALPIVMLTAKNQVADLVEGLSAGANDYLTKPV 890
>gi|83592004|ref|YP_425756.1| response regulator receiver domain-containing protein
[Rhodospirillum rubrum ATCC 11170]
gi|386348700|ref|YP_006046948.1| response regulator receiver domain-containing protein
[Rhodospirillum rubrum F11]
gi|83574918|gb|ABC21469.1| Response regulator receiver domain protein (CheY) [Rhodospirillum
rubrum ATCC 11170]
gi|346717136|gb|AEO47151.1| response regulator receiver domain-containing protein
[Rhodospirillum rubrum F11]
Length = 148
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGLDGEQSNVGF 144
++ ++ + ++ ++D +LIE+ ++ + ++ A GT AL YL D + V
Sbjct: 1 MSSAAQSVTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVS- 59
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
A + L++ D +P MTG ++LK +KE+ R PVVI+++ D +I C + GA Y
Sbjct: 60 -AGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVY 118
Query: 205 IVKPVK 210
I KPV
Sbjct: 119 ITKPVN 124
>gi|409993016|ref|ZP_11276175.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|409936121|gb|EKN77626.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 352
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD+ ++R L+ R LQ V +G AL+ + + ++L++ D
Sbjct: 8 VLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM-----------RSTPLDLVLLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M GY++L+ +K R +PV+++S+ + + I C+E GAE+Y+ KP
Sbjct: 57 IMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 109
>gi|303248005|ref|ZP_07334271.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302490562|gb|EFL50467.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 127
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+KE+ +L VDD R++I+ +L Q+ + + G+ A + L D K
Sbjct: 3 ANKEMRILVVDDFSTMRRIIKNILRQLGFNNIIEADDGSTAWETLNKD-----------K 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V+ II+D+ MP M G ELL+K++ S F E P +++++E I ++ YIVKP
Sbjct: 52 VDFIISDWNMPKMPGIELLRKVRSSEEFAETPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|332534442|ref|ZP_08410281.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036095|gb|EGI72571.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis ANT/505]
Length = 299
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
SK VL VDD ++R ++E+ L++ V VESG +AL ++ +V+
Sbjct: 2 SKRAKVLIVDDDPINRLVLEKTLKVEH-DVFLVESGEKALTFV-----------KTAQVD 49
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
LII D MPG+ GYE+L ++KE+ + + +PV+ +S+ LE GA +YI KP
Sbjct: 50 LIILDVIMPGIDGYEVLVQLKENPITQSIPVIFISANRSHDDEAKGLELGAMDYITKP 107
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K ++VL V+ R+++ LL+ +V + E+G +A YL + +Q+N+ ++
Sbjct: 78 KTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL--EDKQNNI-------DI 128
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ + MPG++G LL +I ++ + +PV++MSS D + CL +GA +++V P++
Sbjct: 129 VLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIR 187
>gi|357632967|ref|ZP_09130845.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|386392586|ref|ZP_10077367.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
gi|357581521|gb|EHJ46854.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|385733464|gb|EIG53662.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
Length = 127
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+KE+ +L VDD R++I+ +L Q+ + + G+ A + L D K
Sbjct: 3 ANKEMRILVVDDFSTMRRIIKNILRQLGFNNIIEADDGSSAWETLNKD-----------K 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ II+D+ MP M G ELL+K++ S F E+P +++++E I ++ YIVKP
Sbjct: 52 IDFIISDWNMPKMPGIELLRKVRSSEEFAELPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|375013988|ref|YP_004990976.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
gi|359349912|gb|AEV34331.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
Length = 126
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VL +DD + RKL++++L+ +V E+G AL+++ + +L++
Sbjct: 6 QVLIIDDEPIMRKLLQQILK-EKYEVILKENGREALEWM----------YSGNIPDLVVA 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP + G+E ++K++ES F +VP++++S E+ + CL+ GA +Y++KP
Sbjct: 55 DLNMPEIDGFEYIEKVRESGFFNDVPLIVLSGEESSAERIKCLKLGANDYLIKP 108
>gi|374301471|ref|YP_005053110.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554407|gb|EGJ51451.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 123
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L+ +++ KVT E G L+ L SN ++LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-----YSN------SIDLIIS 52
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K ++E +++ P+V++S+E I + GA Y+VKP +
Sbjct: 53 DVNMPRMDGFTFIKIVREQEAYKDTPIVVLSTEGQEKDIQQGMNLGANLYLVKPAQ 108
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ Y R++I LL+ KV AV G A + L E+S+ ++LI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLK---EKSH------NIDLIL 87
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL + E + +PV++MSS+D + + C+ GA +Y++KP++
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMR 144
>gi|284035948|ref|YP_003385878.1| response regulator receiver protein [Spirosoma linguale DSM 74]
gi|283815241|gb|ADB37079.1| response regulator receiver protein [Spirosoma linguale DSM 74]
Length = 141
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 71/114 (62%), Gaps = 13/114 (11%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD RK+++ L S K+ + +G A+ +L E N+ ++IITD
Sbjct: 7 ILHVDDDLYMRKIVQLTLN-SEFKLDSCTNGIEAMNWL----ENGNIP------DIIITD 55
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVKP 208
MP + G EL++ I++++ ++ +P++I+SS ED +T+ SC++EGA+++I KP
Sbjct: 56 LLMPQLNGQELIQLIRKNATYKNIPIIILSSLEDGVTKA-SCIQEGADDFISKP 108
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R ++ LL+ S +VTAV +G A + L N+ + V++
Sbjct: 75 KSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVL------ENL---SNNVDI 125
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 126 VLTEVVMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIR 184
>gi|347731496|ref|ZP_08864592.1| response regulator [Desulfovibrio sp. A2]
gi|347519815|gb|EGY26964.1| response regulator [Desulfovibrio sp. A2]
Length = 117
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
+ VDDS R L+ +++ KVT E G L+ L + + KV+LII+D
Sbjct: 1 MIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL----------YSSEKVDLIISDV 50
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M G+ +K ++E +R++P+V++S+E I + GA Y+VKP +
Sbjct: 51 NMPRMDGFTFIKTVREQEAYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQ 104
>gi|422648645|ref|ZP_16711765.1| sensory box protein/response regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330962179|gb|EGH62439.1| sensory box protein/response regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 705
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+E LLQ + + ESG AL+ + L +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQNYRTLTAESGEVALEMVELHAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MPGM GYE+ ++K + +P++++S+ D + S LE GAEEY+ KPV S+
Sbjct: 57 IMMPGMDGYEVASQLKANKSTANIPIIMLSALDQQSARLSGLEAGAEEYLNKPVDSSE 114
>gi|298528407|ref|ZP_07015811.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512059|gb|EFI35961.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 127
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K + +L VDD R++I+ +L Q+ + + GT A + L D K
Sbjct: 3 SNKNIRILVVDDFSTMRRIIKNILRQLGYNNIVEADDGTTAWEILNKD-----------K 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ I++D+ MP MTG ELL+K++ S F ++P +++++E I ++ YIVKP
Sbjct: 52 IDFIVSDWNMPKMTGIELLRKVRSSEEFSDLPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|428311538|ref|YP_007122515.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
gi|428253150|gb|AFZ19109.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
Length = 1099
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
+A +K +L VDD V+ +++ L + + +T +G AL+ + + GF
Sbjct: 686 LAPANKGFQILIVDDEPVNLQVLVNHLSLQNYAITQAANGMEALELI-------DRGF-- 736
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
K +LI+ D MP MTGYEL +KI+E E+PVV++++++ ++ + GA +Y+
Sbjct: 737 -KPDLILLDIMMPKMTGYELCQKIRERFPANELPVVLLTAKNQVSDLVEGFSAGANDYLT 795
Query: 207 KPV 209
KPV
Sbjct: 796 KPV 798
>gi|406836798|ref|ZP_11096392.1| PAS domain S-box [Schlesneria paludicola DSM 18645]
Length = 800
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 18/152 (11%)
Query: 74 ETNRGFPF-----WAMATVAECS-------KELHVLAVDDSYVDRKLIERLLQISSCKVT 121
E+ RG F +A+ATV + + K+L VL VDD+ +R +++ +L + + T
Sbjct: 503 ESGRGSTFHFTARFALATVPKPAFEPLASLKDLRVLIVDDNATNRLILQEILNSWAMRPT 562
Query: 122 AVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPV 181
AV+S ALQ L Q+N +D L+++D MP + G+EL I++ F +
Sbjct: 563 AVDSAPAALQELS-RSIQANEPYD-----LVLSDVHMPDVDGFELASTIRQDRRFHSTVI 616
Query: 182 VIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+++SS C E GA +++KP+K SD
Sbjct: 617 MMLSSGASSGDAARCRELGAAAHLMKPIKQSD 648
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L +D Y ++ L +L+ VT +G A++ ++ ++I+
Sbjct: 678 LRILLAEDGYANQTLAVGVLKKWGHTVTIANNGQEAIE-----------AWEREPFDVIL 726
Query: 154 TDYTMPGMTGYE--LLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP + G++ + + KE R +P++ M++ + + CL G +EYI KP++
Sbjct: 727 MDVQMPEIDGFQATIAIRAKEQGADRHIPIIAMTANAMKGDREECLAAGMDEYIAKPIR 785
>gi|114778037|ref|ZP_01452937.1| type IV pilus biogenesis protein PilB [Mariprofundus ferrooxydans
PV-1]
gi|114551643|gb|EAU54196.1| type IV pilus biogenesis protein PilB [Mariprofundus ferrooxydans
PV-1]
Length = 732
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
S + VL VDDS R L+E +L KV E DG+Q+ +K
Sbjct: 598 ASDQQTVLVVDDSSSVRNLVEFVLDADGYKVLQAE-----------DGQQAWDMLQRMKP 646
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++TD MP MTG ELLK+++E F +VPV+++++ L+ GA +YI KPV
Sbjct: 647 SLVLTDCEMPNMTGMELLKQMREQDRFDDVPVILLTARRSEEDEVQGLKAGAADYIGKPV 706
Query: 210 K 210
+
Sbjct: 707 E 707
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 68/118 (57%), Gaps = 10/118 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++ +L VDD V RK++E LL+ VT V +G A + G+Q K +L+
Sbjct: 108 KVRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWDNIS-SGQQ--------KYDLV 158
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV-LTQIDSCLEEGAEEYIVKPV 209
+TD MP +TG++LL++I + +++ +PV++MS V + ++ G ++++ KP+
Sbjct: 159 LTDVMMPHITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 216
>gi|300310884|ref|YP_003774976.1| chemotaxis regulator protein [Herbaspirillum seropedicae SmR1]
gi|300073669|gb|ADJ63068.1| chemotaxis regulator transmits chemoreceptor signals to flagellar
motor components protein [Herbaspirillum seropedicae
SmR1]
Length = 133
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+ E H L VDD R+++ LL ++ K+ + G+ AL+ L + SN+ F
Sbjct: 2 AATEQHFLVVDDFSTMRRIVSGLLKELEYTKIVEADDGSSALKIL--ESGASNITF---- 55
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MP M G LLKKI+ + +PV+++++E I +EGA+ YIVKP
Sbjct: 56 ---VLTDWNMPVMDGLTLLKKIRSTPALSHLPVLMITAEAKKENIVMAAQEGADGYIVKP 112
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S +V AV G A + L G N+ +LI+
Sbjct: 44 LSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETL--KGGPHNI-------DLIL 94
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++GY LL + E +V + +PV++MSS+D ++ + C+ +GA ++++KPV+
Sbjct: 95 TEVELPLISGYALLTLVTEHAVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVR 151
>gi|410094188|ref|ZP_11290639.1| sensory box protein/response regulator [Pseudomonas viridiflava
UASWS0038]
gi|409758403|gb|EKN43706.1| sensory box protein/response regulator [Pseudomonas viridiflava
UASWS0038]
Length = 705
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+E LLQ + ESG +AL+ + + +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQHYRTQTAESGEQALEMV-----------EKHAPDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASRLKSGKTTSNIPIIMLSALDERSARISGLEAGAEEYLNKPV 110
>gi|429217971|ref|YP_007179615.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Deinococcus peraridilitoris DSM
19664]
gi|429128834|gb|AFZ65849.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Deinococcus peraridilitoris DSM
19664]
Length = 120
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
++ VDDS D KL+E +L S VTA+ T A + + + K +L++ D
Sbjct: 4 IVIVDDSNADLKLMESILTSGSHTVTALNDPTLAEERIASE-----------KPDLVMLD 52
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP GYE+L+ +K + V +++PVV++SS+ T + L +GA EYI KP
Sbjct: 53 VVMPAKNGYEVLRGLKRNPVTKDLPVVLVSSKAADTDVRWGLRQGASEYITKP 105
>gi|402702464|ref|ZP_10850443.1| sensor histidine kinase/response regulator [Pseudomonas fragi A22]
Length = 1082
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 71/124 (57%), Gaps = 13/124 (10%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+ S EL+VL +D+ V+R++++ L+ +VT E DGEQ+ V +
Sbjct: 836 QASLELNVLVAEDNPVNREILKEQLEALGVRVTLAE-----------DGEQALVRWSEGS 884
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+L+ITD MP + GY+L ++++E + VP++ +++ + + + CLE G ++VKP
Sbjct: 885 FDLVITDVNMPRLDGYQLTRRLRE--LDPAVPIIGVTANAMREEGEHCLEVGMNAWLVKP 942
Query: 209 VKLS 212
+ LS
Sbjct: 943 LSLS 946
>gi|372490073|ref|YP_005029638.1| Response regulator receiver domain protein,histidine kinase
[Dechlorosoma suillum PS]
gi|359356626|gb|AEV27797.1| Response regulator receiver domain protein,histidine kinase
[Dechlorosoma suillum PS]
Length = 389
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DDS +DR L +LLQ V AV G +AL L D L+ +L++ D
Sbjct: 13 ILLADDSALDRHLFTQLLQRYGHTVHAVADGAQALAAL-----------DGLQPDLVLLD 61
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M+G EL K+K R++PV+ +S+ + G +YI KP+K
Sbjct: 62 IRMPDMSGLELCAKLKADPATRDIPVIFISAASAVEDRIQAFSSGGVDYIGKPIK 116
>gi|239907541|ref|YP_002954282.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239797407|dbj|BAH76396.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 130
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 12/117 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCK-VTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++ +L VDD RK+I+ +L+ K + E G AL YL + NL
Sbjct: 5 DIKILVVDDFSTMRKIIKSMLRRVGIKSIDDAEDGKIALSYL-----------KSKPYNL 53
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
II D+ MP M+G +LL+ IK + VPV++++SE +Q+ ++ GA YIVKP
Sbjct: 54 IILDWNMPNMSGLDLLRSIKSDETLKNVPVLMVTSEAKESQVIIAVQAGASSYIVKP 110
>gi|322435954|ref|YP_004218166.1| response regulator receiver protein [Granulicella tundricola
MP5ACTX9]
gi|321163681|gb|ADW69386.1| response regulator receiver protein [Granulicella tundricola
MP5ACTX9]
Length = 133
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL VDDS V RK++ER L+ S +TAV Q L L E + D LI+
Sbjct: 1 MRVLIVDDSAVMRKVVERALRQSGLPITAVLQANDGQQALDLLREPTQEPLD-----LIL 55
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
TD MPG+ G + L++ + S+ PVV++++E + + GA+ YI KP
Sbjct: 56 TDINMPGLGGLDFLEQRNQQSLAPGTPVVMITTEGSEALVHRAIAAGAKGYICKP 110
>gi|383934860|ref|ZP_09988299.1| two-component system, chemotaxis family, response regulator CheY
[Rheinheimera nanhaiensis E407-8]
gi|383703991|dbj|GAB58390.1| two-component system, chemotaxis family, response regulator CheY
[Rheinheimera nanhaiensis E407-8]
Length = 127
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V+ + G+ AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNVSEADDGSTALPML------QNGDFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADAKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 109
>gi|254412597|ref|ZP_05026370.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180332|gb|EDX75323.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 1116
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
H+L VDD + ++I L + + +T S AL+ + L GF K +LI+
Sbjct: 710 FHILIVDDEPTNLQVIVNHLSLQNYAITQASSALEALELIRL-------GF---KPDLIL 759
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP MTGYEL KK++E + E+P+V++++++ ++ + GA +Y+ KPV
Sbjct: 760 LDIMMPQMTGYELCKKLREQFLPNELPIVLLTAKNQISDLVEGFAVGANDYLTKPV 815
>gi|334137368|ref|ZP_08510806.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333605141|gb|EGL16517.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1040
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V+ +++ LL + ++ AV+ G +A+ ++G ++L+I D
Sbjct: 704 VLLVDDDPVNLQVLYNLLSVEGYRLIAVDGGAKAMAHIG----------SGQSIDLVIAD 753
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+ MPGM+G EL + I+ E+PV+++++ + + + + GA +++ KPV
Sbjct: 754 WMMPGMSGLELCRAIRARLSLAELPVLLLTARSLPEDVRTGFQAGANDFLRKPV 807
>gi|87118378|ref|ZP_01074277.1| Response regulator receiver [Marinomonas sp. MED121]
gi|86166012|gb|EAQ67278.1| Response regulator receiver [Marinomonas sp. MED121]
Length = 301
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+LAVDD ++ +++E L S +VT +S +A YL ++ FD L +
Sbjct: 7 HLLAVDDEEINLRILEHYLSDSDYQVTFAQSSNQAWDYL----TNADYQFDVL-----LL 57
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D+ MP + G ELLKK KE ++ VP +++S + I L GA Y+ KP+
Sbjct: 58 DWVMPDVDGLELLKKAKELENYKHVPAIMISGLSAPSAISKGLNAGAFYYLTKPL 112
>gi|197118763|ref|YP_002139190.1| chemotaxis sensor histidine kinase CheA/response receiver
[Geobacter bemidjiensis Bem]
gi|197088123|gb|ACH39394.1| sensor histidine kinase CheA and response receiver CheY associated
with MCPs of class 40H [Geobacter bemidjiensis Bem]
Length = 679
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ VL VDDS R + + +L V SG ALQ + ++ FD L
Sbjct: 558 RRFKVLVVDDSITTRTMEQSILLTQGYDVVTAVSGEDALQ------KCADEDFD-----L 606
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
II+D MPG+ G+EL + ++ES +RE+P++I+SS L+ GA+ YIVK
Sbjct: 607 IISDVEMPGINGFELTRALRESERYREIPIIIVSSLSRDEDKRQALQSGAQAYIVK 662
>gi|153876496|ref|ZP_02003789.1| type IV pilus response regulator PilH [Beggiatoa sp. PS]
gi|152067040|gb|EDN66211.1| type IV pilus response regulator PilH [Beggiatoa sp. PS]
Length = 119
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS D ++ +L+ K +A DGEQ LK +LI+
Sbjct: 3 HILIVDDSPQDIDNVKTILEGKGHKTSAAS-----------DGEQGIQKAKELKPDLIVM 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MPG+ G++ +K+K+ S + +P+VIMSS++ T +GA+EY+VKPVK
Sbjct: 52 DIVMPGLDGFKTTRKLKKQSDLK-IPIVIMSSKNQETDKAWAKMQGADEYLVKPVK 106
>gi|443318927|ref|ZP_21048168.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442781461|gb|ELR91560.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 1123
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 13/115 (11%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD+ R + +LQ +V SGT AL+ + NLI+T
Sbjct: 772 HILVVDDNADLRAYVSHVLQRQGYQVRTAHSGTMALEMA-----------HSQPPNLILT 820
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQIDSCLEEGAEEYIVKP 208
D MPGM+G EL++++++ R VPVV+++++ D T+I+ +E+GA+ Y+ KP
Sbjct: 821 DLMMPGMSGLELIQQVRQDERLRTVPVVLLTAKVDDETRIEG-MEQGADAYLSKP 874
>gi|403382341|ref|ZP_10924398.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1041
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
SK +L VDD + K++ +LQ V AV SG AL + + KV+
Sbjct: 708 SKPYTILVVDDEPANLKVLIIMLQSLHYSVIAVGSGQEALDVITTE-----------KVD 756
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
L+I D MP MTGYE+ K +++ E+PV+I+++ L+ + + + GA +Y+ KPV
Sbjct: 757 LLILDLMMPHMTGYEVCKTVRQDYDLVELPVIILTASGQLSDLVASFQFGANDYLQKPVN 816
Query: 211 LSD 213
L +
Sbjct: 817 LKE 819
>gi|386827283|ref|ZP_10114390.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Beggiatoa alba B18LD]
gi|386428167|gb|EIJ41995.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Beggiatoa alba B18LD]
Length = 1322
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD ++ ++ L ++ SG LQ L D +K +LI+ D
Sbjct: 705 ILLVDDELINLHVLSNYLTPHGYELIHATSGHEVLQILE----------DGVKPDLILLD 754
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP MTGYE+ KK++ E+P++I+S+++ + + S L GA +Y+VKPV
Sbjct: 755 IMMPKMTGYEVCKKVRARYNANELPIIIISAKNQVNDLVSGLNAGANDYLVKPV 808
>gi|261410004|ref|YP_003246245.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261286467|gb|ACX68438.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1045
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD V+ +++E +L +VT SG AL L DA + +L+I+D
Sbjct: 722 LLIIDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL-----------DAKEWDLVISD 770
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M+GYEL ++I+E E+PV+++++ I S GA +Y+ KPV+
Sbjct: 771 IMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVE 825
>gi|359457111|ref|ZP_09245674.1| response regulator receiver domain-containing protein
[Acaryochloris sp. CCMEE 5410]
Length = 609
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 78 GFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG 137
G P + T A +L VDD +R ++ R LQ +V +SG AL+ +
Sbjct: 181 GTPLPSAPTPAPEPATPTLLVVDDVEANRDMLGRRLQRKGYEVVLADSGEAALERIA--- 237
Query: 138 EQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL 197
+ L++ D MPG+ G E LK+I+++ E+PV++ +++D + L
Sbjct: 238 --------TTDITLVLLDIMMPGIGGIETLKRIRQTYSQEELPVIMATAKDASENVVEAL 289
Query: 198 EEGAEEYIVKPVKL 211
E GA +YI KP+ L
Sbjct: 290 ELGANDYITKPIDL 303
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVT-AVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L V+D+ ++R ++ R L+ V AV+ G + L EQ + LI+
Sbjct: 4 ILLVEDNELNRDMLGRRLKRRGYDVVIAVDGGEGVKKALT---EQPD---------LILM 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D ++P M G+E + +K +P++ +++ ++ + L G ++Y KPV L
Sbjct: 52 DMSLPVMNGWEATRTLKAGDQTATIPIIALTAHAMVGDREEALAAGCDDYDTKPVDL 108
>gi|189207673|ref|XP_001940170.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976263|gb|EDU42889.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1362
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVL V+D+ V++K++ + L + C ++ ++G AL++L ++N + + +++I+
Sbjct: 1227 LHVLVVEDNLVNQKVLCKQLTKAGCHISTADNGVWALKHLEKTNFRNNT--NGIPLSIIL 1284
Query: 154 TDYTMPGMTGYELLKKIKE----SSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP M G +KI+E + R VP++ +++ QID+ E G +E I KP
Sbjct: 1285 MDCEMPEMDGLTCCRKIREMEQNGELNRHVPIIAVTANIRGGQIDTAKEAGMDEVIGKPF 1344
Query: 210 KLSD 213
++ D
Sbjct: 1345 RIPD 1348
>gi|329849417|ref|ZP_08264263.1| response regulator [Asticcacaulis biprosthecum C19]
gi|328841328|gb|EGF90898.1| response regulator [Asticcacaulis biprosthecum C19]
Length = 156
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISS--CKVTAVESGTRALQYLGLDGEQSN 141
M ++E ++ VL ++D++ D L R + + +VT E+G L +L +G +
Sbjct: 1 MTRLSEQARSAQVLLIEDNHGDAVLTRRAFRRARMPSEVTVAETGEAGLSFLRREGAYA- 59
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
DA + +LI+ D +P M G++ L ++K+ F+ +PV+++SS I + A
Sbjct: 60 ---DAPRPDLILLDLNLPHMHGHDFLSQVKDDPAFKRIPVIVLSSSAAERDIAGAYDRHA 116
Query: 202 EEYIVKPV 209
+I KPV
Sbjct: 117 NGFITKPV 124
>gi|253700458|ref|YP_003021647.1| chemotaxis protein CheA [Geobacter sp. M21]
gi|251775308|gb|ACT17889.1| CheA signal transduction histidine kinase [Geobacter sp. M21]
Length = 679
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ VL VDDS R + + +L V SG ALQ +GE FD L
Sbjct: 558 RRFKVLVVDDSITTRTMEQSILLTQGYDVVTAVSGEDALQ--KCEGED----FD-----L 606
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
II+D MPG+ G+EL + ++ES +RE+P++I+SS L GA+ YIVK
Sbjct: 607 IISDVEMPGINGFELTRTLRESERYREIPIIIVSSLSRDEDKRQALRSGAQAYIVK 662
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A + L Q N+ +L
Sbjct: 19 KIIRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQA--WARLQDMQDNI-------DL 69
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++++ MPG++G LL+KI +V +++PV++MSS D + + CL GA +++VKP++
Sbjct: 70 VLSEVVMPGLSGISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIR 128
>gi|192293028|ref|YP_001993633.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
TIE-1]
gi|192286777|gb|ACF03158.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris TIE-1]
Length = 495
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L DD V R+L+E ++Q + +V+SG A++ L DA ++ ++
Sbjct: 4 RILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEAL--------TAPDAPAIDAVVL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MPG+ G +L KI+ S + +VPV++ ++ + + S + GA +++VKPV +
Sbjct: 56 DLVMPGLDGLGVLSKIRASGL--DVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGI 110
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+ R+++ LL+ +V AV G +A + + + FD L
Sbjct: 51 RSLRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVM----RERAYDFD-----L 101
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G +LL +I ++ + +PV++MSS+D + + C+++GA +++VKPV+
Sbjct: 102 VLTEVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVR 160
>gi|226315436|ref|YP_002775332.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098386|dbj|BAH46828.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1050
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 82 WAM--ATVAECSKEL-HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGE 138
WA T+ E +++ +L VDD V+ +++E +L +VT V SG AL LG GE
Sbjct: 694 WATKPTTLLEVNRDRPRLLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAILG-TGE 752
Query: 139 QSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+L+I+D MP M+GYEL + I+E E+PV+++++ I S
Sbjct: 753 W----------DLVISDIMMPQMSGYELTRMIRERFTLTELPVLLLTARSQPKDIQSGFL 802
Query: 199 EGAEEYIVKPVK 210
GA +Y+ KP++
Sbjct: 803 AGANDYVTKPIE 814
>gi|27382241|ref|NP_773770.1| two-component response regulator [Bradyrhizobium japonicum USDA
110]
gi|27355412|dbj|BAC52395.1| two-component response regulator [Bradyrhizobium japonicum USDA
110]
Length = 499
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+LIE ++Q + V+SG A+ L DA ++ +I D
Sbjct: 5 ILIADDDAVARRLIENMVQKCGYETVVVDSGDAAIAAL--------TAPDAPAIDGVILD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI+E+ + VPV++ ++ + + S + GA +++VKPV +
Sbjct: 57 LVMPGLDGMGVLAKIREAGL--SVPVIVQTAHGGIDNVISAMRAGAADFVVKPVGM 110
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S +V +V G +A + L G + +LI+
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEIL--KGRPHGI-------DLIL 115
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++GY LL I E + + +PV++MSS+D ++ + C+ GA +Y+VKP++
Sbjct: 116 TEVDLPSISGYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLR 172
>gi|329924374|ref|ZP_08279491.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328940725|gb|EGG37042.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1021
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD V+ +++E +L +VT SG AL L DA +L+I+D
Sbjct: 698 LLIVDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL-----------DAKAWDLVISD 746
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M+GYEL ++I+E E+PV+++++ I S GA +Y+ KPV+
Sbjct: 747 IMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVE 801
>gi|39937247|ref|NP_949523.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
CGA009]
gi|39651105|emb|CAE29628.1| two component sigma-54-dependent transcriptional regulator, Fis
family [Rhodopseudomonas palustris CGA009]
Length = 495
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L DD V R+L+E ++Q + +V+SG A++ L DA ++ ++
Sbjct: 4 RILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEAL--------TAPDAPAIDAVVL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MPG+ G +L KI+ S + +VPV++ ++ + + S + GA +++VKPV +
Sbjct: 56 DLVMPGLDGLGVLSKIRASGL--DVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGI 110
>gi|415942145|ref|ZP_11555873.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
gi|407758932|gb|EKF68696.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
Length = 133
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 95 HVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
H L VDD R+++ LL ++ K+ + G+ AL+ L + SN+ F ++
Sbjct: 7 HFLVVDDFSTMRRIVSGLLKELEYTKIVEADDGSTALKIL--ESGASNITF-------VL 57
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
TD+ MP M G LLKKI+ S +PV+++++E I +EGA+ YIVKP
Sbjct: 58 TDWNMPVMDGLTLLKKIRSSPALAHLPVLMITAEAKKENIVMAAQEGADGYIVKP 112
>gi|28868489|ref|NP_791108.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213968377|ref|ZP_03396521.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato T1]
gi|301384643|ref|ZP_07233061.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato Max13]
gi|302058904|ref|ZP_07250445.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato K40]
gi|302133017|ref|ZP_07259007.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422656694|ref|ZP_16719139.1| sensory box protein/response regulator [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|28851727|gb|AAO54803.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927015|gb|EEB60566.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tomato T1]
gi|331015226|gb|EGH95282.1| sensory box protein/response regulator [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 705
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+E LLQ + ESG +AL + DA +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQGYETLTAESGEQALAMV-----------DARAPDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPGM GYE+ +K +P++++S+ D S LE GAEEY+ KPV+
Sbjct: 57 IMMPGMDGYEVASVLKAGKGTANIPIIMLSALDEQGARLSGLEAGAEEYLSKPVE 111
>gi|406877649|gb|EKD26809.1| Sensor protein [uncultured bacterium]
Length = 388
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
T+ K+ +L VDD + I+ L++ + ++G +AL+ + D
Sbjct: 6 TIERAYKDSKILIVDDKEANLLFIKDLIKSFGFRTVTAKNGRQALEKI-----------D 54
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
+ +L++ D MP M G+E+LK++K+ S+ +PVV++S+ D + I C++ GA +Y+
Sbjct: 55 SENPDLVLLDIMMPEMDGFEVLKQLKQKSILYSLPVVVISAIDDMENIAECIKLGATDYL 114
Query: 206 VKP 208
VKP
Sbjct: 115 VKP 117
>gi|408791240|ref|ZP_11202850.1| stage II sporulation protein E [Leptospira meyeri serovar Hardjo
str. Went 5]
gi|408462650|gb|EKJ86375.1| stage II sporulation protein E [Leptospira meyeri serovar Hardjo
str. Went 5]
Length = 1048
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+++ VL VDD ++R++++ L++ C V +G A++ + DG
Sbjct: 673 GEKIKVLVVDDEPINRQVLKNHLKLIGCDVHEASNGGDAIRMVRDDG----------PFE 722
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
L++ D MPGM+GY++ ++ES ++P++ +++++ +T I + LE G +Y+ KP
Sbjct: 723 LMLLDIMMPGMSGYDVCTVLRESYSLYQLPILFLTAKNQITDIIASLEAGGNDYLAKP 780
>gi|333923713|ref|YP_004497293.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333749274|gb|AEF94381.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 1274
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 11/120 (9%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+K +VL V+D+ +++LI+ LL + +VT E+G +AL+ L QSN FD
Sbjct: 1050 NKITNVLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEMLN----QSN--FD----- 1098
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+++ D MP M GYE + I+ ++ +P++ +++ + + CL G ++Y+ KPVK
Sbjct: 1099 IVLMDMQMPVMDGYETTRVIRSDERYKSLPIIALTAHAMKGDNEKCLAAGCDDYLAKPVK 1158
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL +D + ++LI L+ + V A + G + L + + ++++ D
Sbjct: 796 VLVAEDEWTTKQLIANYLEKAGYTVVATDQGKQVLTLAKI-----------YQPDVLVLD 844
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+P ++G+E+L KIK+ +++PVV+ S VL + + GA ++I KPV
Sbjct: 845 ILLPDLSGWEVLAKIKKDQETQDIPVVVCS---VLPEKERAFSLGAVDFIEKPV 895
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S + H++ +DD D+ +E L +C V T + L E N + +V+
Sbjct: 913 SDQTHIVLIDD---DKMALEFL----NCIVGGAGYQTHSFM---LAEEALNYIINGGQVH 962
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV 189
II D MPGM G+E L ++ + ++ +PV+I + +D+
Sbjct: 963 AIILDLLMPGMDGFEFLDNLRADANYKSIPVLIYTGKDL 1001
>gi|379011725|ref|YP_005269537.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
gi|375302514|gb|AFA48648.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
Length = 124
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L +DDS V RK+I + + + ES AL L G + K+ LI
Sbjct: 1 MKMLTIDDSAVVRKIISAAVVVLGHECLEAESAQDALDLL--KGPE--------KIELIF 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D+ MPGM G E LK IK+S F+ +PVV++++E++ + ++ G +YI KP + +
Sbjct: 51 LDWNMPGMNGLEFLKTIKKSDQFKHIPVVMVTTENMPESVIEAVKAGVTQYITKPFSIEE 110
>gi|323701833|ref|ZP_08113503.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
gi|323533137|gb|EGB23006.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
Length = 1274
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 11/120 (9%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+K +VL V+D+ +++LI+ LL + +VT E+G +AL+ L QSN FD
Sbjct: 1050 NKITNVLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEMLN----QSN--FD----- 1098
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+++ D MP M GYE + I+ ++ +P++ +++ + + CL G ++Y+ KPVK
Sbjct: 1099 IVLMDMQMPVMDGYETTRVIRSDERYKSLPIIALTAHAMKGDNEKCLAAGCDDYLAKPVK 1158
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL +D + ++LI L+ + V A + G +AL + + ++++ D
Sbjct: 796 VLVAEDEWTTKQLIANYLEKAGYTVVATDQGKQALTLAKI-----------YQPDVLVLD 844
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+P ++G+E+L KIK+ +++PVV+ S VL + + GA ++I K V
Sbjct: 845 ILLPDLSGWEVLAKIKKDQETQDIPVVVCS---VLPEKERAFSLGAVDFIEKTV 895
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S + H++ +DD D+ +E L +C V T + L E N + +V+
Sbjct: 913 SDQTHIVLIDD---DKMALEFL----NCIVGGAGYQTHSFM---LAEEALNYIINGGQVH 962
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV 189
II D MPGM G+E L ++ + ++ +PV+I + +D+
Sbjct: 963 AIILDLLMPGMDGFEFLDNLRADANYKSIPVLIYTGKDL 1001
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V++ R ++ LL+ +VTAV +G +A + L + +N ++L
Sbjct: 35 RSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQ---DLTN------HIDL 85
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI R +PV++MSS D + + CL +GA +++VKP++
Sbjct: 86 VLTEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIR 144
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
MA ++ +HVL +D R + +L + + +VT VE+G A L E SN+
Sbjct: 1 MADDDRENRNIHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELL--KEDSNI- 57
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
++++ D MP M G+ELL ++ R +PV++MS+++ ++ CL GA++
Sbjct: 58 ------DVVLLDLWMPEMDGWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKD 111
Query: 204 YIVKPVKL 211
Y+VKP+++
Sbjct: 112 YLVKPIRI 119
>gi|319956173|ref|YP_004167436.1| response regulator receiver protein [Nitratifractor salsuginis DSM
16511]
gi|319418577|gb|ADV45687.1| response regulator receiver protein [Nitratifractor salsuginis DSM
16511]
Length = 127
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAV---ESGTRALQYLGLDGEQSNVGFDALKVN 150
L VL VDD +++RKLI+ LL V+ + E+G+ ALQ + + + V+
Sbjct: 3 LKVLVVDDDFINRKLIQALLHRHPDLVSQILEAENGSEALQVVRENPD----------VD 52
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+ D MP + G E LK + +PV+++S++D TQ + + GAE++I+KP+
Sbjct: 53 LILLDILMPVLDGKEFLKIFRSDPENSRIPVIVLSTDD--TQKSAVFDLGAEDFIIKPIN 110
Query: 211 LSD 213
+D
Sbjct: 111 END 113
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V++ R ++ LL+ +VTAV +G +A + L + +N ++L
Sbjct: 90 RSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQ---DLTN------HIDL 140
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI R +PV++MSS D + + CL +GA +++VKP++
Sbjct: 141 VLTEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIR 199
>gi|383317280|ref|YP_005378122.1| chemotaxis signal transduction protein [Frateuria aurantia DSM
6220]
gi|379044384|gb|AFC86440.1| chemotaxis signal transduction protein [Frateuria aurantia DSM
6220]
Length = 314
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 69 EKKFKETNRGFPFWAMATVAECSKELH-VLAVDDSYVDRKLIERLLQISSCKVTAVESGT 127
E +E P A AT A H VL VDDS V R+ I RLL + G
Sbjct: 158 EPASEEIPHSIPTIAQATNATPLPSRHRVLVVDDSAVARRQITRLLDQLNLDYMTANDGA 217
Query: 128 RALQYL-----GLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVV 182
+AL L D E GFD L+I+D MP M GY L +KI+E++ R +P++
Sbjct: 218 QALSLLEDRSAQPDPEHGPAGFD-----LVISDIEMPQMDGYTLSRKIRETASLRTLPIL 272
Query: 183 IMSSEDVLTQIDSCLEEGAEEYIVK--PVKLS 212
+ SS + GA+ ++ K P +LS
Sbjct: 273 LHSSLSGVFNDQQATSAGADRFLAKFDPGELS 304
>gi|376297750|ref|YP_005168980.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans ND132]
gi|323460312|gb|EGB16177.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans ND132]
Length = 317
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK- 148
+ VL DDS + RK+I +L + KV A E+G ALQYL +S L
Sbjct: 179 AHRNYRVLLADDSTMARKMIANILTTAGFKVHAEENGELALQYLLKAKARSRAEGMPLAH 238
Query: 149 -VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
VNL++TD MP M G+ L ++IKE + R +PV++ SS T + GA+ I K
Sbjct: 239 YVNLVVTDIEMPSMDGHSLTRRIKEDTDLRHLPVILCSSIITATLHHKGIAVGADAQISK 298
>gi|428309074|ref|YP_007120051.1| serine phosphatase RsbU, regulator of sigma subunit [Microcoleus
sp. PCC 7113]
gi|428250686|gb|AFZ16645.1| serine phosphatase RsbU, regulator of sigma subunit [Microcoleus
sp. PCC 7113]
Length = 974
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
++++L VDD V+R++ L + + + +G AL L E+ LK +
Sbjct: 596 GSKINILIVDDEPVNRQVFANYLALHNYGINQASNGLEALALL----ER------GLKPD 645
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
L++ D MP +TGYE+ +KI+E+ E+PV+++S+++ ++ + LE GA +Y+ KP+
Sbjct: 646 LVLLDVMMPRLTGYEVTRKIRETWQANELPVLLLSAKNQVSDLVVGLEVGANDYLTKPI 704
>gi|241767083|ref|ZP_04764858.1| response regulator receiver modulated CheW protein [Acidovorax
delafieldii 2AN]
gi|241362354|gb|EER58337.1| response regulator receiver modulated CheW protein [Acidovorax
delafieldii 2AN]
Length = 319
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV-GFDAL-KVNLII 153
VLA DDS+V R LIE+ LQI V+SG A L Q+ G L KV+L++
Sbjct: 190 VLAADDSFVARSLIEQELQILQAPFEMVKSGQEAWDRLNALAVQAAAEGKTVLDKVSLVL 249
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
TD MP M G+ L + IK+ + F+ +PV+I SS D GA+ Y+ K
Sbjct: 250 TDLEMPEMDGFTLTRHIKQDARFQGLPVIIHSSLSGSANEDHVRSVGADGYVAK 303
>gi|381171602|ref|ZP_09880745.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687975|emb|CCG37232.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 726
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KVT V + L + ++ FDA
Sbjct: 460 RSMRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVM------ADEDFDA----- 508
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 509 VIVDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>gi|294666715|ref|ZP_06731951.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603540|gb|EFF46955.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 726
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KVT V + L + ++ FDA
Sbjct: 460 RSMRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVM------ADEDFDA----- 508
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 509 VIVDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>gi|294624915|ref|ZP_06703570.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600794|gb|EFF44876.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 726
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KVT V + L + ++ FDA
Sbjct: 460 RSMRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVM------ADEDFDA----- 508
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 509 VIVDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>gi|303326752|ref|ZP_07357194.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345890763|ref|ZP_08841627.1| hypothetical protein HMPREF1022_00287 [Desulfovibrio sp.
6_1_46AFAA]
gi|302862740|gb|EFL85672.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345048989|gb|EGW52809.1| hypothetical protein HMPREF1022_00287 [Desulfovibrio sp.
6_1_46AFAA]
Length = 122
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H++ VDDS R L+ +L+ KV+ E G A++ L + V+LI++
Sbjct: 4 HIMVVDDSKTIRNLVAFVLKSEGFKVSTAEDGLDAIEKL----------YSLEPVDLIVS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K I+ ++++P++++S+E I + + GA Y+VKP +
Sbjct: 54 DVNMPRMDGFTFIKTIRTQDAYKDIPIIVLSTEGQEQDIQTGMSLGANLYMVKPAQ 109
>gi|291523438|emb|CBK81731.1| Response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Coprococcus catus GD/7]
Length = 499
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
K VL VDD+ ++R +++ +L + + A E+G +A+Q LG N+G D
Sbjct: 2 DKRQRVLIVDDAKLNRDILKEILGETYNYLEA-ENGNQAVQMLG-----ENIGID----- 50
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
L++ D MP M G+E+L+ +K S E PV+++SSED + + E G +YI +P
Sbjct: 51 LMLLDINMPQMNGFEVLEIMKRSQCIAETPVIMISSEDDVDTMRKAYELGITDYITRP 108
>gi|87119466|ref|ZP_01075363.1| Response regulator receiver domain protein (CheY) [Marinomonas sp.
MED121]
gi|86164942|gb|EAQ66210.1| Response regulator receiver domain protein (CheY) [Marinomonas sp.
MED121]
Length = 130
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + + GT AL L QS
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTALPIL-----QSGT------ 49
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ ++TD+ MPGMTG ELL+ ++ + +PV+++++E QI S + G Y+VKP
Sbjct: 50 IDFLVTDWNMPGMTGIELLRSVRADEKLKTIPVLMVTAEAKRDQIISAAQAGVNGYVVKP 109
>gi|421598409|ref|ZP_16041841.1| two-component response regulator, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404269491|gb|EJZ33739.1| two-component response regulator, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 414
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + V+SG A+ L DA ++ +I D
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYETVVVDSGDAAIAAL--------TAPDAPAIDGVILD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI+E+ + +PV++ ++ + + S + GA +++VKPV L
Sbjct: 57 LVMPGLDGMGVLAKIREAGL--SIPVIVQTAHGGIDNVISAMRAGAADFVVKPVGL 110
>gi|383769464|ref|YP_005448527.1| two-component response regulator [Bradyrhizobium sp. S23321]
gi|381357585|dbj|BAL74415.1| two-component response regulator [Bradyrhizobium sp. S23321]
Length = 498
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + V+SG A+ L DA V+ +I D
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYETIVVDSGDAAIAAL--------TAPDAPAVDGVILD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI+E+ + VPV++ ++ + + S + GA +++VKPV +
Sbjct: 57 LVMPGLDGMGVLAKIREAGL--SVPVIVQTAHGGIDNVISAMRAGAADFVVKPVGM 110
>gi|422299009|ref|ZP_16386590.1| sensor histidine kinase/response regulator [Pseudomonas avellanae
BPIC 631]
gi|407989191|gb|EKG31557.1| sensor histidine kinase/response regulator [Pseudomonas avellanae
BPIC 631]
Length = 641
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
KE +L V+D+ V+R +++ +L CKV G A+ G A
Sbjct: 510 GKERSILLVEDNPVNRTVVQAMLHNLGCKVDVAVDGVEAVMKAG-----------AGNYA 558
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+ D +P M GYE +KI++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 559 LILMDCRLPVMDGYEATRKIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLPKPFK 618
Query: 211 LSD 213
+D
Sbjct: 619 HAD 621
>gi|283785622|ref|YP_003365487.1| chemotaxis protein CheY [Citrobacter rodentium ICC168]
gi|282949076|emb|CBG88682.1| chemotaxis protein CheY [Citrobacter rodentium ICC168]
Length = 129
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ SV +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADSVMASMPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|392556611|ref|ZP_10303748.1| two-component response regulator [Pseudoalteromonas undina NCIMB
2128]
Length = 311
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 12/113 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD ++R ++ER L +V V SG AL ++ +V+LII D
Sbjct: 7 ILIVDDDALNRIILERTLS-DEHEVYLVASGEEALTFV-----------KHTQVDLIILD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM GY++L ++KESS+ +P++ +S+ LE GA +YIVKP
Sbjct: 55 IMMPGMNGYDVLVELKESSLSHAIPIIFISANSSHEDEAKGLELGAMDYIVKP 107
>gi|392951604|ref|ZP_10317159.1| hypothetical protein WQQ_12310 [Hydrocarboniphaga effusa AP103]
gi|391860566|gb|EIT71094.1| hypothetical protein WQQ_12310 [Hydrocarboniphaga effusa AP103]
Length = 1224
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 85 ATVAECSKEL---HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSN 141
A+VA+ K++ +L VDD + + + L+ VT + G +AL L + +
Sbjct: 1094 ASVADVQKDVAGKKLLIVDDDMRNIFALSKALRTRKLDVTMAQDGYKALAQLDANPD--- 1150
Query: 142 VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
V+L++ D MPGM GYE ++KI+E F +P++ ++++ + + C+E GA
Sbjct: 1151 -------VDLVLMDIMMPGMDGYETIRKIREQPRFARLPIIAVTAKAMTGDREKCIEAGA 1203
Query: 202 EEYIVKPVKL 211
+Y KP+ +
Sbjct: 1204 SDYCSKPIDV 1213
>gi|406880713|gb|EKD28990.1| hypothetical protein ACD_79C00125G0003 [uncultured bacterium]
Length = 121
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLG-LDGEQSNVGFDALKVNLI 152
+ VL VDDS+ R+++ +LL T VE +Q + L+G V LI
Sbjct: 1 MKVLVVDDSFTTRRIVIKLL--GEMNYTDVEEAADGVQAMSRLNG-----------VGLI 47
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MP M G +K ++ + V+ +VP++++++E T+I ++ G Y+VKP
Sbjct: 48 VTDWNMPNMDGLTFVKNVRANPVYAKVPIIMLTTESAKTEIVEAIKCGVNNYVVKP 103
>gi|325179822|emb|CCA14225.1| protein kinase putative [Albugo laibachii Nc14]
Length = 935
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++ +L V+D R +LQ V+AVE+G ALQ L +QS +D L+
Sbjct: 5 DVRILVVEDDAFTRIATIDILQSCKYNVSAVENGKEALQTL----QQSYQQYD-----LV 55
Query: 153 ITDYTMPGMTGYELLKKIK-ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+ D +P MTG ELL+ I+ + F +P+V+ S + + + +CL +GA++Y++KP+++
Sbjct: 56 LCDVMLPCMTGIELLEAIQAHPTRFNHIPIVMTSCNEGMDVVKNCLSKGAKDYLIKPIQV 115
Query: 212 S 212
+
Sbjct: 116 N 116
>gi|1653994|emb|CAA57487.1| cheY [Helicobacter pylori NCTC 11637 = CCUG 17874]
Length = 140
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 93 ELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+L +L VDDS R++I+ L ++ V E G A + L + + +
Sbjct: 16 KLKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------V 65
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 66 LITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 122
>gi|407783713|ref|ZP_11130909.1| two-component hybrid sensor and regulator, chemotaxis family,
sensor kinase [Oceanibaculum indicum P24]
gi|407200309|gb|EKE70318.1| two-component hybrid sensor and regulator, chemotaxis family,
sensor kinase [Oceanibaculum indicum P24]
Length = 913
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 76 NRGFPFW--AMATVAECSKEL---HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRAL 130
++ F W A AT+ E K+L VL VDDS R L+ LL ++ +VTA E+ + AL
Sbjct: 771 SQAFADWFDADATLPEEKKDLTGKRVLLVDDSPFFRNLLTPLLTVAGYEVTAAENASTAL 830
Query: 131 QYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
Y + FD +I++D MPGM+G++ K ++ES +++VP+V +SS
Sbjct: 831 SYC-----EEGRDFD-----VIVSDIEMPGMSGFDFAKAVRESR-WQDVPMVALSSHTSP 879
Query: 191 TQIDSCLEEGAEEYIVK 207
+D E G +Y+ K
Sbjct: 880 RDLDRGREAGFNDYVAK 896
>gi|402574526|ref|YP_006623869.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfosporosinus meridiei DSM
13257]
gi|402255723|gb|AFQ45998.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfosporosinus meridiei DSM
13257]
Length = 232
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 15/121 (12%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
++L VDD + +++E L + ESG AL+ L DAL ++L++
Sbjct: 5 NILIVDDDPIVLRMLESALSKNGYHTFKAESGENALRIL-----------DALAIDLVLL 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC--LEEGAEEYIVKPVKLS 212
D +PGM G LKKI+ + VPV++++S D ++ID LE GA++YI KP++
Sbjct: 54 DVVLPGMDGLNTLKKIRNHPTYGFVPVLMLTSRD--SEIDHVIGLELGADDYISKPIRFH 111
Query: 213 D 213
+
Sbjct: 112 E 112
>gi|456735763|gb|EMF60489.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia EPM1]
Length = 910
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL DD +R +++RLL+ + KVT V G L L EQ++ +DA
Sbjct: 645 RSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQAS--YDA----- 693
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MPGM+G +LLK+++ ++S VPV+++S++ I C + GA ++ KPV
Sbjct: 694 AIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|434406173|ref|YP_007149058.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
gi|428260428|gb|AFZ26378.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
Length = 1165
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
A + E +L VDD V+R+++ L + + ++T SG AL L +G L
Sbjct: 725 ATNNPEWSILIVDDEPVNRQVLVNHLSLYNYEITEAASGIEALAIL--EG--------GL 774
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
K +LI+ D MP MTGY++ ++I+++ E+P+V++++ + ++ + E GA +Y+ K
Sbjct: 775 KPDLILLDVMMPRMTGYDVTRQIRQTWQASELPIVLLTARNQVSDLVVGFEAGANDYLTK 834
Query: 208 PV 209
P+
Sbjct: 835 PI 836
>gi|408822682|ref|ZP_11207572.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Pseudomonas geniculata N1]
Length = 910
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL DD +R +++RLL+ + KVT V G L L EQ++ +DA
Sbjct: 645 RSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQAS--YDA----- 693
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MPGM+G +LLK+++ ++S VPV+++S++ I C + GA ++ KPV
Sbjct: 694 AIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|424668616|ref|ZP_18105641.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
gi|401068878|gb|EJP77402.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
Length = 907
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL DD +R +++RLL+ + KVT V G L L EQ++ +DA
Sbjct: 642 RSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQAS--YDA----- 690
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MPGM+G +LLK+++ ++S VPV+++S++ I C + GA ++ KPV
Sbjct: 691 AIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 750
>gi|302036588|ref|YP_003796910.1| response regulator [Candidatus Nitrospira defluvii]
gi|300604652|emb|CBK40984.1| Response regulator, contains GGDEF domain [Candidatus Nitrospira
defluvii]
Length = 334
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAV-ESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS DR LI+ +L + + T V ES A + LGLDG + G +V+LI
Sbjct: 1 MGILIVDDSTDDRLLIQSILANAGYEETFVAESAAAAFRLLGLDGPRQMAG----RVDLI 56
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+ D MP G E ++IK +R++P+++++ + + GA +Y+ KP+
Sbjct: 57 LMDIVMPATNGIEACRQIKAVERYRDIPIIMVTVKTDPVDLQLAFAAGAIDYVAKPI 113
>gi|254521065|ref|ZP_05133120.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
gi|219718656|gb|EED37181.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
Length = 910
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL DD +R +++RLL+ + KVT V G L L EQ++ +DA
Sbjct: 645 RSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQAS--YDA----- 693
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MPGM+G +LLK+++ ++S VPV+++S++ I C + GA ++ KPV
Sbjct: 694 AIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|190574186|ref|YP_001972031.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Stenotrophomonas maltophilia
K279a]
gi|190012108|emb|CAQ45731.1| putative histidine kinase/response regulator fusion protein,
regulation of pathogenicity factors [Stenotrophomonas
maltophilia K279a]
Length = 883
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL DD +R +++RLL+ + KVT V G L L EQ++ +DA
Sbjct: 618 RSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQAS--YDA----- 666
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MPGM+G +LLK+++ ++S VPV+++S++ I C + GA ++ KPV
Sbjct: 667 AIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 726
>gi|83647950|ref|YP_436385.1| signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gi|83635993|gb|ABC31960.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 758
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+D+ V+R L ++L+ C+V E+G A+Q +G + FD LI
Sbjct: 633 LRVLLVEDNTVNRNLARKMLEKCGCRVDFAENGEIAIQQMG------STHFD-----LIF 681
Query: 154 TDYTMPGMTGYELLKKIKESS-VFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
D MP M GYE ++I+ES F +P+V +++ + + C++ G ++++ KP++
Sbjct: 682 MDCWMPVMDGYETTRRIRESGQSFSHIPIVALTANAFPGEKEKCMQCGMDDFLTKPIRFE 741
Query: 213 D 213
+
Sbjct: 742 E 742
>gi|320102985|ref|YP_004178576.1| response regulator receiver sensor signal transduction histidine
kinase [Isosphaera pallida ATCC 43644]
gi|319750267|gb|ADV62027.1| response regulator receiver sensor signal transduction histidine
kinase [Isosphaera pallida ATCC 43644]
Length = 501
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD+ V+R ++ R + + E+G AL+ + ++ FD L++ D
Sbjct: 46 VLVVDDNAVNRYMLSRHVAQLGLEAETAENGQIALEMV------AHRSFD-----LVLLD 94
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP + GY+ L +K R++PV+I+S D + + C+E GAE+Y+ KP+
Sbjct: 95 VMMPVLDGYQTLDALKRDPKLRDLPVIIVSGVDEIDSVVRCIERGAEDYLTKPI 148
>gi|17228134|ref|NP_484682.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
gi|17129984|dbj|BAB72596.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 820
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 15/121 (12%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD + +R ++ LL+ +T E+G GLD Q ++ +L+IT
Sbjct: 617 HILVVDDRWENRAVLLNLLEPLGFIITEAENGQA-----GLDQLQQHLP------DLVIT 665
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS--CLEEGAEEYIVKPVKLS 212
D MP M G+E+L+KI+E R + +++ S+ + QID ++ G ++++ KPV+++
Sbjct: 666 DLVMPVMDGFEMLRKIREQEQLRSLKILVSSAS--VAQIDQQMSIDAGGDDFLAKPVQVN 723
Query: 213 D 213
D
Sbjct: 724 D 724
>gi|422405756|ref|ZP_16482795.1| response regulator receiver:ATP-binding region, partial
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330880822|gb|EGH14971.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 636
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
KE +L V+D+ V+R +++ +L+ CKV + +DG ++ + A
Sbjct: 514 GKERSILLVEDNPVNRTVVQAMLRNLGCKVD-----------VAVDGAEAVMKASAGNHA 562
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 563 LILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLAKPFK 622
Query: 211 LSD 213
+D
Sbjct: 623 HAD 625
>gi|220904650|ref|YP_002479962.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868949|gb|ACL49284.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 122
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H++ VDDS R L+ +L+ KV+ E G A++ L + V+LI++
Sbjct: 4 HIMVVDDSKTIRNLVAFVLKGEGFKVSTAEDGLDAIEKL----------YSLDPVDLIVS 53
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G+ +K I+ ++++P++++S+E I + + GA Y+VKP +
Sbjct: 54 DVNMPRMDGFTFIKTIRAQDAYKDIPIIVLSTEGQEKDIQTGMSLGANLYMVKPAQ 109
>gi|344344232|ref|ZP_08775096.1| CheA signal transduction histidine kinase [Marichromatium
purpuratum 984]
gi|343804189|gb|EGV22091.1| CheA signal transduction histidine kinase [Marichromatium
purpuratum 984]
Length = 722
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL VDDS R++ LL+ S +VT E G AL D Q FDA +++
Sbjct: 604 HVLVVDDSLNTREIERDLLESSGYRVTLAEDGLEAL-----DKAQRQ-RFDA-----VVS 652
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
D MPG+ G+ L +++E+S +R P+VI+SS +E GA YIVK
Sbjct: 653 DVEMPGLDGFSLTARLRENSDYRATPIVIVSSRADEADRRRGIEVGANAYIVK 705
>gi|194365606|ref|YP_002028216.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
gi|194348410|gb|ACF51533.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
Length = 907
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL DD +R +++RLL+ + KVT V G L L EQ++ +DA
Sbjct: 642 RSLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQAS--YDA----- 690
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MPGM+G +LLK+++ ++S VPV+++S++ I C + GA ++ KPV
Sbjct: 691 AIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPDSILRCEQAGARAFLAKPV 750
>gi|223938904|ref|ZP_03630791.1| response regulator receiver protein [bacterium Ellin514]
gi|223892457|gb|EEF58931.1| response regulator receiver protein [bacterium Ellin514]
Length = 153
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCK--VTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
VL V+D D L++R + + + V G A+ YL DG+ ++ L LI+
Sbjct: 9 VLLVEDDLNDIFLVKRAFKRAHIPNPLQIVTDGEEAIHYLRGDGKYADRNHFPLPC-LIV 67
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MP TG+E+L+ IK + + +PVVI+SS D +D E GA Y++KPV
Sbjct: 68 MDIKMPRKTGFEVLEWIKHDAFMKRLPVVIVSSSDQPGDVDKAYEMGANAYMIKPVDF 125
>gi|46581630|ref|YP_012438.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120601211|ref|YP_965611.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|387154828|ref|YP_005703764.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
gi|46451053|gb|AAS97698.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120561440|gb|ABM27184.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|311235272|gb|ADP88126.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
Length = 126
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+ + +L VDD R++I+ +L Q+ V + GT A + L D +
Sbjct: 3 ANPNMRILVVDDFSTMRRIIKNILRQLGFSNVIEADDGTTAWETLNKD-----------R 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V+ +I+D+ MP MTG ELL+K++ S F ++P +++++E I ++ YIVKP
Sbjct: 52 VDFVISDWNMPNMTGIELLRKVRASEEFGDMPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|295107997|emb|CBL21950.1| Response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Ruminococcus obeum A2-162]
Length = 499
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS +R +++ +L + + A E+G +A+Q +G N+G D L++ D
Sbjct: 7 ILIVDDSKFNRDILKEILGETYNYLEA-ENGNQAIQMIG-----ENIGID-----LMLLD 55
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G+E+LK +K S E PV+++SSE+ + + E G +YI +P
Sbjct: 56 INMPQMNGFEVLKIMKRSQCIEETPVIMISSEESVDTMREAYEMGITDYITRP 108
>gi|410664403|ref|YP_006916774.1| sensor protein [Simiduia agarivorans SA1 = DSM 21679]
gi|409026760|gb|AFU99044.1| sensor protein [Simiduia agarivorans SA1 = DSM 21679]
Length = 906
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L V+D ++R+L LL+ KVT E+G AL L L + ++L++
Sbjct: 787 HLLLVEDIAINRELATFLLEDFGAKVTGAENGRHALAQLALHPD----------IDLVLM 836
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP M GY+ I++ +P++ M++ V + ID+CL G +++ KP+
Sbjct: 837 DIQMPEMDGYQATAAIRQMPGHENLPIIAMTANAVNSDIDACLAAGMNDHVGKPI 891
>gi|332669229|ref|YP_004452237.1| response regulator receiver protein [Cellulomonas fimi ATCC 484]
gi|332338267|gb|AEE44850.1| response regulator receiver protein [Cellulomonas fimi ATCC 484]
Length = 127
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ L VDDS R+++ +L+ + T E G +AL L DG V+L+
Sbjct: 1 MRALVVDDSRTMRRIVSNVLEGLGFETTHAEHGQQALDVLAQDG----------AVDLVT 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D+ MP M G EL+ ++++ +R V ++++++E +QI L GA EY++KP
Sbjct: 51 VDWNMPVMDGLELVTHVRKNRDWRSVTLMMVTTEAEQSQIVRALAAGAHEYLIKP 105
>gi|410996662|gb|AFV98127.1| response regulator receiver protein [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 124
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDDS R++I+ L S V G LQ G+ +++G ++I
Sbjct: 1 MKLLVVDDSSTMRRIIKNTL--SRLGYEDVLEGEDGLQGWGVLDANADIG-------MLI 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
TD+ MP M G EL+KK++ S F ++P++++++E ++ + L+ G YIVKP
Sbjct: 52 TDWNMPEMNGLELVKKVRADSRFADLPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>gi|404495358|ref|YP_006719464.1| response receiver [Geobacter metallireducens GS-15]
gi|418065548|ref|ZP_12702920.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
gi|78192977|gb|ABB30744.1| response receiver [Geobacter metallireducens GS-15]
gi|373561933|gb|EHP88155.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
Length = 141
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L D+ R + + L++ + ++ ++G RAL+Y +G+ + + L+ +L++ D
Sbjct: 12 ILIEDEPGHTRLITKNLMKSADVEILPFDTGRRALEYF--EGKTA----EDLRQHLVVLD 65
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPG+ G+E+LK++K + VPV++ ++ D +I C EGA Y+VKP+
Sbjct: 66 INMPGIDGFEVLKRLKGNEATAAVPVIVFTTTDHPDEIRRCYHEGANLYLVKPM 119
>gi|389684641|ref|ZP_10175969.1| sensor histidine kinase/response regulator [Pseudomonas
chlororaphis O6]
gi|388551864|gb|EIM15129.1| sensor histidine kinase/response regulator [Pseudomonas
chlororaphis O6]
Length = 1071
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 13/118 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +D+ +++ +I+ L+ C VTA +G ALQ Q V FD L++
Sbjct: 840 LHILVAEDNAINQAIIKEQLEALGCTVTAASNGEEALQLW-----QPQV-FD-----LVL 888
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
TD MP + GYEL + ++E RE+P+V +++ + + C+ G ++VKP+ L
Sbjct: 889 TDVNMPLLNGYELTRALRERD--REIPIVGVTANALREEGARCMAVGMNAWLVKPLSL 944
>gi|422652299|ref|ZP_16715084.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330965367|gb|EGH65627.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 641
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
KE +L V+D+ V+R +++ +L CKV +G A+ G A L
Sbjct: 511 KERSILLVEDNPVNRTVVQAMLHNLGCKVDVAVNGVEAVMKAG-----------AGNYAL 559
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
I+ D +P M GYE +KI++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 560 ILMDCRLPVMDGYEATRKIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLPKPFKH 619
Query: 212 SD 213
+D
Sbjct: 620 AD 621
>gi|406878862|gb|EKD27658.1| Chemotaxis regulatory protein CheY [uncultured bacterium]
Length = 119
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G AL +G V L+
Sbjct: 1 MKILVVDDSSTMRRIIKNTLSKLGYNDVDEAEDGQEALNKMG-------------GVELL 47
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MP M G L+K ++ + +++ VP++++++E T+I ++ G Y+VKP
Sbjct: 48 VTDWNMPNMDGLTLVKSVRSNPIYKAVPIIMVTTEAAKTEIIEAIKSGVNNYVVKP 103
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL QSN+ +L
Sbjct: 36 KTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQSNI-------DL 86
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA E++ KP++
Sbjct: 87 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIR 146
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+D R ++ LL+ +VT SG +A + L V+L++
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSS---------VDLVL 159
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD MP ++G ELL KI + +PVV+MS D + + CL +GA +++VKPV+
Sbjct: 160 TDLMMPRLSGIELLGKIMSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVR 216
>gi|158335119|ref|YP_001516291.1| response regulator receiver domain-containing protein
[Acaryochloris marina MBIC11017]
gi|158305360|gb|ABW26977.1| response regulator receiver domain protein, putative [Acaryochloris
marina MBIC11017]
Length = 595
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD +R ++ R LQ +V +SG AL+ + + L++ D
Sbjct: 185 LLVVDDVEANRDMLSRRLQRKGYEVALADSGEAALELMA-----------TTDIALVLLD 233
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G E LK+I++ E+PV++ +++D + LE GA +YI KP+ L
Sbjct: 234 IMMPGIGGIETLKRIRQIYSQEELPVIMATAKDASENVVEALELGANDYITKPIDL 289
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+LI+ D ++P M G+E + +K +P++ +++ ++ + L G ++Y KPV
Sbjct: 32 DLILMDMSLPVMNGWEATRTLKAGDQTATIPIIALTAHAMVGDREEALAAGCDDYDTKPV 91
Query: 210 KL 211
L
Sbjct: 92 DL 93
>gi|119484778|ref|ZP_01619260.1| two-component response regulator [Lyngbya sp. PCC 8106]
gi|119457596|gb|EAW38720.1| two-component response regulator [Lyngbya sp. PCC 8106]
Length = 215
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L VDD + R I L+IS V + E+G AL+ + D K +LI+
Sbjct: 3 LTILVVDDDFGTRLSISDYLEISGYTVISAENGQEALELV-----------DKHKPHLIV 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TD TMP M GY+L+K+I+ FR +PV+ +++ + + G + Y+ KP +L +
Sbjct: 52 TDITMPEMDGYDLVKRIRSRPAFRLLPVIFLTAHTAIQSRIRGYQLGCDNYLPKPFELDE 111
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V++ R ++ LL+ S +V AV +G +A + L E N D L
Sbjct: 72 RSLKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKIL----EDMNNHTD-----L 122
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI+ R +PV++MSS D + + CL +GA +++VKP++
Sbjct: 123 VLTEVVMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIR 181
>gi|374289117|ref|YP_005036202.1| putative two-component response regulator [Bacteriovorax marinus
SJ]
gi|301167658|emb|CBW27241.1| putative two-component response regulator [Bacteriovorax marinus
SJ]
Length = 217
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L++L VDD + KLIE+ L+ T V G L L + N GFD LI+
Sbjct: 5 LNILIVDDDQITSKLIEKRLKKRGFSTTTVHCGGDCLNLL----REKNHGFD-----LIL 55
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
D MP +TG E++K+++E+S E+P+++ +S I L+ GA +Y+ KPV +
Sbjct: 56 LDILMPDITGLEVMKELRETSSQVELPIIMTTSMKETEDIVKALKLGANDYVYKPVNMD 114
>gi|90425451|ref|YP_533821.1| two component sigma54 specific Fis family transcriptional regulator
[Rhodopseudomonas palustris BisB18]
gi|90107465|gb|ABD89502.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisB18]
Length = 500
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + V+SG A++ L D DA ++ ++ D
Sbjct: 5 ILIADDDAVQRRLVENMVQKCGYRTVVVDSGDAAIETLTAD--------DAPTIDAVVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L++++++ + +PV++ ++ + + S + GA +++VKPV +
Sbjct: 57 LVMPGLDGMGVLERMRDAGL--SIPVIVQTAHGGIDNVVSAMRAGATDFVVKPVGI 110
>gi|213968170|ref|ZP_03396315.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. tomato T1]
gi|301383824|ref|ZP_07232242.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. tomato Max13]
gi|302058498|ref|ZP_07250039.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. tomato K40]
gi|302133390|ref|ZP_07259380.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|213927150|gb|EEB60700.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. tomato T1]
Length = 641
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
KE +L V+D+ V+R +++ +L CKV G A+ G A
Sbjct: 510 GKERSILLVEDNPVNRTVVQAMLHNLGCKVDVAVDGVDAVMKAG-----------AGNYA 558
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+ D +P M GYE +KI++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 559 LILMDCRLPVMDGYEATRKIRQLSGLERIPIIALTANALHGDRDACLQAGMDDYLPKPFK 618
Query: 211 LSD 213
+D
Sbjct: 619 HAD 621
>gi|404404775|ref|ZP_10996359.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Alistipes sp. JC136]
Length = 122
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LII+D MP M G E L +K + +FR +PVV++SSED T+ LEEGAE+YIVKP
Sbjct: 49 DLIISDIRMPEMRGDEFLNHLKRNELFRGIPVVMLSSEDSTTERIRLLEEGAEDYIVKP 107
>gi|334117194|ref|ZP_08491286.1| adenylate/guanylate cyclase with GAF sensor(s) [Microcoleus
vaginatus FGP-2]
gi|333462014|gb|EGK90619.1| adenylate/guanylate cyclase with GAF sensor(s) [Microcoleus
vaginatus FGP-2]
Length = 552
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ + +L+ R+LQ + KV V +G AL D QS+ +LI+ D
Sbjct: 15 ILVVDDTPDNLRLLIRILQKNGYKVRPVTNGFSAL-----DAIQSSAP------DLILLD 63
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP + GYEL KK+K S FRE+P++ +S+ + E G +YI KP ++ +
Sbjct: 64 IMMPDIDGYELCKKLKSESEFREIPIIFLSALEEGINKAKAFEVGGADYITKPFQVKE 121
>gi|406999383|gb|EKE17039.1| chemotaxis protein CheY [uncultured bacterium]
Length = 129
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSC-KVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+ +H L VDD R+++ LL+ VT E G +ALQ L G +
Sbjct: 3 DQNMHFLVVDDFSTMRRILRNLLKEHGFHNVTEAEDGVQALQRLKGGG-----------I 51
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ ++TD+ MP M G EL++ I+ + + +PV+++++E I + + GA+ YIVKP
Sbjct: 52 DFVVTDWNMPNMDGLELIQNIRATPIISCLPVLMVTAEAKKENIIAAAQAGADGYIVKP 110
>gi|315644147|ref|ZP_07897317.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315280522|gb|EFU43811.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 1048
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 72 FKETNRGFPFWAMATVAECSKEL-HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRAL 130
+E R P V E S++ +L VDD V+ +++E +L VT SG L
Sbjct: 697 LEEVERMPPAAKQPVVIENSRDRPRLLIVDDDPVNLQVLEAILPPDEYDVTMATSGKEVL 756
Query: 131 QYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVL 190
L DA + +L+I+D MP M+GYEL ++I+E E+PV+++++
Sbjct: 757 AVL-----------DAQEWDLVISDIMMPQMSGYELTRRIRERFTLTELPVLLLTARSQP 805
Query: 191 TQIDSCLEEGAEEYIVKPVK 210
I S GA +Y+ KPV+
Sbjct: 806 KDIQSGFLAGANDYVTKPVE 825
>gi|350552423|ref|ZP_08921625.1| multi-sensor hybrid histidine kinase [Thiorhodospira sibirica ATCC
700588]
gi|349794365|gb|EGZ48182.1| multi-sensor hybrid histidine kinase [Thiorhodospira sibirica ATCC
700588]
Length = 900
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRAL----QYLGLDGEQSNVGFD 145
C + VL VDD+ V++++ +L + G +AL Q L G
Sbjct: 598 CVRNAKVLLVDDNPVNQQVALGMLNSLCVSAEVADDGPQALAKAQQMLAEQG-------- 649
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
V++I+ D MPGM+GYE + ++ + FR+ P++ M++ + ++ D CL G ++I
Sbjct: 650 --GVDVILMDIQMPGMSGYECTQMLRAQTAFRDTPIIAMTAHAMQSERDKCLAHGMNDHI 707
Query: 206 VKPVKL 211
KP+ +
Sbjct: 708 AKPIDI 713
>gi|315127301|ref|YP_004069304.1| chemotaxis protein [Pseudoalteromonas sp. SM9913]
gi|359437848|ref|ZP_09227898.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. BSi20311]
gi|392554052|ref|ZP_10301189.1| chemotaxis protein [Pseudoalteromonas undina NCIMB 2128]
gi|315015815|gb|ADT69153.1| chemotaxis protein [Pseudoalteromonas sp. SM9913]
gi|358027477|dbj|GAA64147.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. BSi20311]
Length = 127
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNIKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQAFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADEKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 109
>gi|428769009|ref|YP_007160799.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
gi|428683288|gb|AFZ52755.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
Length = 130
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDD++ R++I L+ + +VT +G A + + + K NL+I
Sbjct: 8 IKILVVDDNHTPREVISEALKQFNIQVTEASNGVEATKII-----------EKEKFNLVI 56
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD MP M GYEL + IK + +VPV+I S++ I ++GA+ YI+KP K
Sbjct: 57 TDVVMPEMNGYELCRWIKSNPGTEKVPVIICSTKGEEFDIHWATKQGADAYIIKPFK 113
>gi|359794219|ref|ZP_09296936.1| putative adenylate/guanylate cyclase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359249531|gb|EHK53132.1| putative adenylate/guanylate cyclase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 516
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD +R L+ R L +V ESG AL L D + +L++ D
Sbjct: 176 ILVVDDIGSNRDLLSRRLLHDGHQVFTAESGLSALTCLAED-----------EFDLVLLD 224
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G E+L ++K +R +PV+++S + + + C+E GA++Y++KP
Sbjct: 225 LLMPDMNGIEVLSRLKAERRWRHIPVIMISGLNEVDAVVRCIEAGADDYLLKP 277
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL S KV A G +A + L N D ++LI+
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETL------KNKPSD---IDLIL 85
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E + + +PV++MSS D ++ + C+ +GA ++++KPV+
Sbjct: 86 TEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVR 142
>gi|218548515|ref|YP_002382306.1| chemotaxis regulatory protein CheY [Escherichia fergusonii ATCC
35469]
gi|422805939|ref|ZP_16854371.1| response regulator receiver domain-containing protein [Escherichia
fergusonii B253]
gi|424815914|ref|ZP_18241065.1| chemotaxis regulatory protein CheY [Escherichia fergusonii ECD227]
gi|218356056|emb|CAQ88672.1| chemotaxis regulator transmitting signal to flagellar motor
component [Escherichia fergusonii ATCC 35469]
gi|324113664|gb|EGC07639.1| response regulator receiver domain-containing protein [Escherichia
fergusonii B253]
gi|325496934|gb|EGC94793.1| chemotaxis regulatory protein CheY [Escherichia fergusonii ECD227]
Length = 129
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + G
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLQMGG----------- 50
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
N +I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 51 FNFVISDWNMPNMDGLELLKTIRADGAMSTLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|397690815|ref|YP_006528069.1| response regulator receiver protein [Melioribacter roseus P3M]
gi|395812307|gb|AFN75056.1| response regulator receiver protein [Melioribacter roseus P3M]
Length = 147
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVE--SGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L ++D ++++R L+ S K+ + G L ++ G+ S + ++ ++I+
Sbjct: 8 ILLIEDDIAHAEIVKRSLEASEFKIELIHLFDGKEGLDFIFKAGKYSA---NNIQPDIIL 64
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
D +P + G+E L+KIK F+ +PVVI+S+ T ID E GA Y++KP+
Sbjct: 65 LDIRLPRINGFEFLQKIKNDEAFKVIPVVILSTSSNQTDIDRAFELGANSYLIKPLSFD 123
>gi|428221705|ref|YP_007105875.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 7502]
gi|427995045|gb|AFY73740.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 7502]
Length = 595
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD+ +R L R LQ VT +G AL + GE L++
Sbjct: 185 HLLVVDDNENNRDLFTRQLQREGYIVTTATNGQEALTMIK-TGEYE----------LVLL 233
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP + GY+ LK +K ++ +PV+++S+ D + Q+ C+E GAE+++ KP
Sbjct: 234 DLMMPILDGYQALKMLKADEQWQHIPVIMISASDEIDQVVRCIEIGAEDFLPKP 287
>gi|289623551|ref|ZP_06456505.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649158|ref|ZP_06480501.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422583017|ref|ZP_16658147.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330867854|gb|EGH02563.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 705
Score = 66.2 bits (160), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG L + L +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K S +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKPV 110
>gi|257487365|ref|ZP_05641406.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|422679689|ref|ZP_16737962.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|331009036|gb|EGH89092.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 705
Score = 66.2 bits (160), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG L + L +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K S +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKPV 110
>gi|416025402|ref|ZP_11569136.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320329810|gb|EFW85798.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 705
Score = 66.2 bits (160), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG L + L +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K S +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKPV 110
>gi|116624444|ref|YP_826600.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227606|gb|ABJ86315.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 129
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAV-ESGTRALQYLGLDGEQSNVGFDALKVNL 151
E +L VDDS RK+++R+L+ + + A+ E+G DG+++ +V+L
Sbjct: 2 ESDILVVDDSAAIRKILQRVLRQTGMAIRAIHEAG---------DGQEALALLAEHRVDL 52
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD MP M G +LL +K S+ + PVV++++E T++ ++ GA Y+ KP
Sbjct: 53 VLTDINMPKMDGLQLLASLKASAQWHNTPVVMITTEGGETKVAEAVKLGAAGYVRKP 109
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 18/125 (14%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
C +H+L VDD RK+++ LL VT V S A L + K
Sbjct: 141 CPSSIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLI---------YGTTKF 191
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID-----SCLEEGAEEY 204
+L++TD MP +TG++LL++I E + +PV++MS T +D ++ G +++
Sbjct: 192 DLVLTDVMMPQVTGFDLLQRINEHPEIKNIPVILMSG----TALDCKYANDTIKIGGQDF 247
Query: 205 IVKPV 209
+ KP+
Sbjct: 248 VTKPI 252
>gi|91975887|ref|YP_568546.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisB5]
gi|91682343|gb|ABE38645.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisB5]
Length = 500
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L DD V R+L+E ++Q + +SG A+ L DA ++ ++
Sbjct: 4 RILIADDDPVQRRLVENMVQKCGYEAVLADSGDAAIALL--------TAPDAAAIDAVVL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MPG+ G +L KI+ES + VPV++ ++ + + S + GA +++VKPV +
Sbjct: 56 DLVMPGLDGLGVLGKIRESGL--NVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGI 110
>gi|23015107|ref|ZP_00054894.1| COG3437: Response regulator containing a CheY-like receiver domain
and an HD-GYP domain [Magnetospirillum magnetotacticum
MS-1]
Length = 339
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 96 VLAVDDSYVDRKLIE-RLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
L +DD+ + L++ RL++I C+V +ES AL + ++N ++I+T
Sbjct: 3 ALLIDDNPTNLMLLKHRLIKIEGCEVVCMESAFDALAWC-----ETNTP------DIILT 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
DY MPGM G + ++++++ ++VPVV++++ DV L+ GA +++ KPV
Sbjct: 52 DYMMPGMDGLDFIRQVRQRDAMQDVPVVVVTTSDVREIRQQALDLGAADFLTKPV 106
>gi|28869414|ref|NP_792033.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. tomato str. DC3000]
gi|422659973|ref|ZP_16722392.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. lachrymans str. M302278]
gi|28852655|gb|AAO55728.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. tomato str. DC3000]
gi|331018585|gb|EGH98641.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. lachrymans str. M302278]
Length = 641
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
KE +L V+D+ V+R +++ +L CKV G A+ G A
Sbjct: 510 GKERSILLVEDNPVNRTVVQAMLHNLGCKVDVAVDGVDAVMKAG-----------AGNYA 558
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+ D +P M GYE +KI++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 559 LILMDCRLPVMDGYEATRKIRQLSGLERIPIIALTANALHGDRDACLQAGMDDYLPKPFK 618
Query: 211 LSD 213
+D
Sbjct: 619 HAD 621
>gi|121997279|ref|YP_001002066.1| response regulator receiver protein [Halorhodospira halophila SL1]
gi|121588684|gb|ABM61264.1| response regulator receiver protein [Halorhodospira halophila SL1]
Length = 133
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL ++ V + G AL L G
Sbjct: 3 ADKNIKILVVDDFSTMRRIIKNLLRELGYNNVVEADDGNTALPILQKGG----------- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ +ITD+ MPGMTG ELLK ++ +++P +++++E QI + G YIVKP
Sbjct: 52 IQFLITDWNMPGMTGLELLKHVRADPNLKDLPTLMVTAEAKREQIMEAAQAGVNGYIVKP 111
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ KV AV G A + L E+S+ ++LI+
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLK---EKSH------SIDLIL 91
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL + E+ + +PV++MSS+D +T + C+ GA +Y++KP++
Sbjct: 92 TELDLPSISGFALLALVMENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMR 148
>gi|24251269|gb|AAN46189.1| unknown protein [Synechococcus elongatus PCC 7942]
Length = 411
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L +D+ ++R ++ER L+ V V SG AL L + FD L+
Sbjct: 174 RLLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQL------AQQPFD-----LLFL 222
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MPG+TG+E+L+++K E+PV+++S+ D L + CL GA +Y+ KP
Sbjct: 223 DVMMPGLTGFEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYLTKP 276
>gi|16760865|ref|NP_456482.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16765258|ref|NP_460873.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29141443|ref|NP_804785.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56413164|ref|YP_150239.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62180493|ref|YP_216910.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161502968|ref|YP_001570080.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|161613524|ref|YP_001587489.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167552444|ref|ZP_02346197.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994222|ref|ZP_02575314.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234018|ref|ZP_02659076.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168238550|ref|ZP_02663608.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168241549|ref|ZP_02666481.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168259805|ref|ZP_02681778.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168462549|ref|ZP_02696480.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168820744|ref|ZP_02832744.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194443971|ref|YP_002041182.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194450206|ref|YP_002045970.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469235|ref|ZP_03075219.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194738315|ref|YP_002114952.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197251046|ref|YP_002146105.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264393|ref|ZP_03164467.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362090|ref|YP_002141727.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198242782|ref|YP_002215167.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200391037|ref|ZP_03217648.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204931042|ref|ZP_03221868.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205352380|ref|YP_002226181.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207856563|ref|YP_002243214.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213163283|ref|ZP_03348993.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213426383|ref|ZP_03359133.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213613011|ref|ZP_03370837.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213647157|ref|ZP_03377210.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224583580|ref|YP_002637378.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238912507|ref|ZP_04656344.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289824045|ref|ZP_06543643.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|339999723|ref|YP_004730606.1| chemotaxis protein CheY [Salmonella bongori NCTC 12419]
gi|374980939|ref|ZP_09722269.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|375000947|ref|ZP_09725287.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375114823|ref|ZP_09759993.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375118648|ref|ZP_09763815.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|375123182|ref|ZP_09768346.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|378445307|ref|YP_005232939.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378450525|ref|YP_005237884.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378699788|ref|YP_005181745.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378955478|ref|YP_005212965.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378959117|ref|YP_005216603.1| hypothetical protein STBHUCCB_10310 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378984482|ref|YP_005247637.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989262|ref|YP_005252426.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701101|ref|YP_005242829.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383496595|ref|YP_005397284.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386591753|ref|YP_006088153.1| chemotaxis regulator [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|409249636|ref|YP_006885458.1| probable transcriptional regulator ycf27 OmpR-like protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|416421678|ref|ZP_11689676.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416433752|ref|ZP_11697175.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416436573|ref|ZP_11698375.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416449035|ref|ZP_11706686.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416452354|ref|ZP_11708905.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416456523|ref|ZP_11711527.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416469402|ref|ZP_11718514.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416477779|ref|ZP_11721575.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416491051|ref|ZP_11726943.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416498185|ref|ZP_11730111.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416504829|ref|ZP_11733411.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416512330|ref|ZP_11737719.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416527957|ref|ZP_11743605.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416535129|ref|ZP_11747493.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416542619|ref|ZP_11751685.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416550564|ref|ZP_11756056.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416562457|ref|ZP_11762157.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416570706|ref|ZP_11766201.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579322|ref|ZP_11771180.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416585193|ref|ZP_11774746.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589921|ref|ZP_11777437.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416601251|ref|ZP_11784915.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416604339|ref|ZP_11786099.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612014|ref|ZP_11791193.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416619519|ref|ZP_11795181.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416629495|ref|ZP_11800159.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416638785|ref|ZP_11804153.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416651735|ref|ZP_11811252.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416658097|ref|ZP_11814124.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416666444|ref|ZP_11817518.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416676964|ref|ZP_11822101.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416698242|ref|ZP_11828373.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416705032|ref|ZP_11830644.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416711020|ref|ZP_11834978.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416716888|ref|ZP_11839180.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416722023|ref|ZP_11843082.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416727507|ref|ZP_11847102.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416737408|ref|ZP_11852640.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416751169|ref|ZP_11860023.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416758760|ref|ZP_11863858.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416762321|ref|ZP_11866317.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416769634|ref|ZP_11871218.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417341135|ref|ZP_12122286.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417348436|ref|ZP_12127384.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417357479|ref|ZP_12132603.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417364703|ref|ZP_12137557.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417372737|ref|ZP_12142954.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417382859|ref|ZP_12148703.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417390286|ref|ZP_12153816.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417414831|ref|ZP_12158644.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417457482|ref|ZP_12163823.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417473850|ref|ZP_12169142.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417510155|ref|ZP_12175143.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417517762|ref|ZP_12180280.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|418484061|ref|ZP_13053065.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418492647|ref|ZP_13059129.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418493758|ref|ZP_13060220.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418497579|ref|ZP_13063996.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418502312|ref|ZP_13068684.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418509530|ref|ZP_13075824.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418513300|ref|ZP_13079531.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418527749|ref|ZP_13093705.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418760776|ref|ZP_13316929.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418764827|ref|ZP_13320920.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418772420|ref|ZP_13328424.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418775608|ref|ZP_13331566.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418778127|ref|ZP_13334040.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418783214|ref|ZP_13339062.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418789537|ref|ZP_13345324.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418794733|ref|ZP_13350451.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418796934|ref|ZP_13352625.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418800777|ref|ZP_13356425.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418809469|ref|ZP_13365021.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813622|ref|ZP_13369143.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418814889|ref|ZP_13370397.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418822676|ref|ZP_13378087.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418827609|ref|ZP_13382739.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418833659|ref|ZP_13388578.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836657|ref|ZP_13391541.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418840570|ref|ZP_13395399.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418844980|ref|ZP_13399766.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418850604|ref|ZP_13405320.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418853890|ref|ZP_13408575.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418859033|ref|ZP_13413642.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863497|ref|ZP_13418035.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418868157|ref|ZP_13422600.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419730422|ref|ZP_14257368.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419732107|ref|ZP_14259013.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419738279|ref|ZP_14265044.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419742329|ref|ZP_14269003.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419747465|ref|ZP_14273985.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|419789387|ref|ZP_14315067.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419794367|ref|ZP_14319981.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421358608|ref|ZP_15808905.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421362578|ref|ZP_15812830.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421367778|ref|ZP_15817971.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370554|ref|ZP_15820719.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378042|ref|ZP_15828131.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421382651|ref|ZP_15832697.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421387621|ref|ZP_15837620.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421391724|ref|ZP_15841690.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421395072|ref|ZP_15845011.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421401336|ref|ZP_15851212.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403062|ref|ZP_15852916.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421410429|ref|ZP_15860210.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412694|ref|ZP_15862448.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421416687|ref|ZP_15866406.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421681|ref|ZP_15871349.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421425143|ref|ZP_15874779.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421432011|ref|ZP_15881588.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421436573|ref|ZP_15886100.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441365|ref|ZP_15890835.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421446698|ref|ZP_15896110.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421447807|ref|ZP_15897203.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421570973|ref|ZP_16016656.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421574689|ref|ZP_16020310.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421579704|ref|ZP_16025266.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421586011|ref|ZP_16031498.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|421884141|ref|ZP_16315357.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|422026113|ref|ZP_16372522.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422031143|ref|ZP_16377322.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|423140427|ref|ZP_17128065.1| chemotaxis protein CheY [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|427550375|ref|ZP_18927829.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427566461|ref|ZP_18932544.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427586557|ref|ZP_18937333.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427609910|ref|ZP_18942198.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427633768|ref|ZP_18947093.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427656156|ref|ZP_18951858.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427661303|ref|ZP_18956770.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427668935|ref|ZP_18961571.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|436634020|ref|ZP_20515660.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436671825|ref|ZP_20517508.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436797529|ref|ZP_20523275.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436811437|ref|ZP_20530317.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436815808|ref|ZP_20533359.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436838955|ref|ZP_20537275.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436851402|ref|ZP_20542001.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436858166|ref|ZP_20546686.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436865341|ref|ZP_20551308.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436875486|ref|ZP_20557393.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436883391|ref|ZP_20561820.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887749|ref|ZP_20564078.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436896461|ref|ZP_20569217.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436906440|ref|ZP_20575286.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436911611|ref|ZP_20577440.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921086|ref|ZP_20583557.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436930530|ref|ZP_20588755.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436935563|ref|ZP_20591003.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942752|ref|ZP_20595698.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436951755|ref|ZP_20600810.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436964536|ref|ZP_20606172.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436971487|ref|ZP_20609880.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985557|ref|ZP_20615077.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436991476|ref|ZP_20617487.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437012311|ref|ZP_20624824.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437020719|ref|ZP_20627530.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437029989|ref|ZP_20631171.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437042372|ref|ZP_20635963.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052463|ref|ZP_20641886.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437058083|ref|ZP_20644930.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067410|ref|ZP_20650330.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437075774|ref|ZP_20654137.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437086663|ref|ZP_20660672.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437095361|ref|ZP_20664465.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437100431|ref|ZP_20665918.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437126010|ref|ZP_20674279.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437134496|ref|ZP_20678920.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437139739|ref|ZP_20682003.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437147121|ref|ZP_20686673.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437155412|ref|ZP_20691631.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437158127|ref|ZP_20693069.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437171672|ref|ZP_20700776.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437177355|ref|ZP_20703835.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437187548|ref|ZP_20710029.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437218549|ref|ZP_20712885.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437261139|ref|ZP_20718209.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437265739|ref|ZP_20720554.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437281967|ref|ZP_20728968.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437286596|ref|ZP_20730250.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437308446|ref|ZP_20735487.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437328695|ref|ZP_20740990.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437344055|ref|ZP_20746069.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437351898|ref|ZP_20747632.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437431630|ref|ZP_20756096.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437433171|ref|ZP_20756264.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437462610|ref|ZP_20762761.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437478539|ref|ZP_20767552.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437487162|ref|ZP_20769843.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437506364|ref|ZP_20775647.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437538438|ref|ZP_20782008.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437553345|ref|ZP_20783987.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437575231|ref|ZP_20790027.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437585771|ref|ZP_20793051.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437601496|ref|ZP_20797740.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437617267|ref|ZP_20802903.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437636859|ref|ZP_20807202.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437666137|ref|ZP_20814918.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437686995|ref|ZP_20819474.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437688240|ref|ZP_20819674.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437707924|ref|ZP_20825836.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437732546|ref|ZP_20831627.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437770492|ref|ZP_20835512.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437810822|ref|ZP_20841041.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437837276|ref|ZP_20845711.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|437855111|ref|ZP_20847605.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|438026669|ref|ZP_20855131.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438090061|ref|ZP_20860363.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438101209|ref|ZP_20864160.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438112469|ref|ZP_20869066.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438133163|ref|ZP_20873956.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|440764852|ref|ZP_20943876.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440768271|ref|ZP_20947244.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440774720|ref|ZP_20953607.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445137945|ref|ZP_21383798.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445148155|ref|ZP_21388665.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445150087|ref|ZP_21389548.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445167817|ref|ZP_21394647.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445217316|ref|ZP_21402239.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445231601|ref|ZP_21405778.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445275758|ref|ZP_21410578.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445338569|ref|ZP_21416142.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445349172|ref|ZP_21419951.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445362312|ref|ZP_21424153.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|452119885|ref|YP_007470133.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|61220888|sp|P0A2D5.2|CHEY_SALTY RecName: Full=Chemotaxis protein CheY
gi|61220889|sp|P0A2D6.2|CHEY_SALTI RecName: Full=Chemotaxis protein CheY
gi|25298673|pir||AH0745 chemotaxis protein CheY [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|109157644|pdb|2FKA|A Chain A, Crystal Structure Of Mg(2+) And Bef(3)(-)-Bound Chey In
Complex With Chez(200-214) Solved From A F432 Crystal
Grown In Caps (Ph 10.5)
gi|109157652|pdb|2FLK|A Chain A, Crystal Structure Of Chey In Complex With Chez(200-214)
Solved From A F432 Crystal Grown In Caps (Ph 10.5)
gi|109157658|pdb|2FLW|A Chain A, Crystal Structure Of Mg2+ And Bef3- Ound Chey In Complex
With Chez 200-214 Solved From A F432 Crystal Grown In
Hepes (ph 7.5)
gi|109157660|pdb|2FMF|A Chain A, Crystal Structure Of Chey In Complex With Chez 200-214
Solved From A F432 Crystal Grown In Hepes (ph 7.5)
gi|109157663|pdb|2FMH|A Chain A, Crystal Structure Of Mg2+ And Bef3- Bound Chey In Complex
With Chez 200-214 Solved From A F432 Crystal Grown In
Tris (Ph 8.4)
gi|109157665|pdb|2FMI|A Chain A, Crystal Structure Of Chey In Complex With Chez 200-214
Solved From A F432 Crystal Grown In Tris (Ph 8.4)
gi|109157668|pdb|2FMK|A Chain A, Crystal Structure Of Mg2+ And Bef3- Bound Chey In Complex
With Chez 200-214 Solved From A P2(1)2(1)2 Crystal Grown
In Mes (Ph 6.0)
gi|153909|gb|AAA27037.1| CheY [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420453|gb|AAL20832.1| chemotaxis regulator protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16503162|emb|CAD05667.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137070|gb|AAO68634.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56127421|gb|AAV76927.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62128126|gb|AAX65829.1| chemotaxis regulator, transmits chemoreceptor signals to flagelllar
motor components [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|160864315|gb|ABX20938.1| hypothetical protein SARI_01030 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|161362888|gb|ABX66656.1| hypothetical protein SPAB_01244 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402634|gb|ACF62856.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408510|gb|ACF68729.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194455599|gb|EDX44438.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194713817|gb|ACF93038.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195634330|gb|EDX52682.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197093567|emb|CAR59030.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197214749|gb|ACH52146.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197242648|gb|EDY25268.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197288648|gb|EDY28023.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197937298|gb|ACH74631.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603482|gb|EDZ02028.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320086|gb|EDZ05291.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205272161|emb|CAR37017.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205322902|gb|EDZ10741.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205327866|gb|EDZ14630.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331974|gb|EDZ18738.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205339215|gb|EDZ25979.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205342668|gb|EDZ29432.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205351062|gb|EDZ37693.1| chemotaxis response regulator CheY [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206708366|emb|CAR32670.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224468107|gb|ACN45937.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247086|emb|CBG24907.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993903|gb|ACY88788.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158436|emb|CBW17945.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912910|dbj|BAJ36884.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320085464|emb|CBY95245.1| probable transcriptional regulator ycf27 OmpR-like protein
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|321224559|gb|EFX49622.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322616916|gb|EFY13824.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618154|gb|EFY15046.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625825|gb|EFY22644.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626277|gb|EFY23087.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632691|gb|EFY29436.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322639035|gb|EFY35728.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640475|gb|EFY37128.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646016|gb|EFY42533.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649562|gb|EFY45994.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655470|gb|EFY51778.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660249|gb|EFY56487.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662930|gb|EFY59137.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668115|gb|EFY64274.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674125|gb|EFY70219.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675521|gb|EFY71595.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683065|gb|EFY79081.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686759|gb|EFY82737.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322714969|gb|EFZ06540.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323130200|gb|ADX17630.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|323195350|gb|EFZ80530.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199242|gb|EFZ84337.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204033|gb|EFZ89048.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323211872|gb|EFZ96701.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217482|gb|EGA02201.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221983|gb|EGA06372.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224720|gb|EGA08989.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231504|gb|EGA15617.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235946|gb|EGA20025.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240516|gb|EGA24559.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245408|gb|EGA29408.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250179|gb|EGA34071.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253627|gb|EGA37455.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255056|gb|EGA38844.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260288|gb|EGA43909.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266880|gb|EGA50366.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270706|gb|EGA54147.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326622915|gb|EGE29260.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326627432|gb|EGE33775.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|332988809|gb|AEF07792.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|339513084|emb|CCC30828.1| chemotaxis protein CheY [Salmonella bongori NCTC 12419]
gi|353075635|gb|EHB41395.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353575601|gb|EHC38297.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353593936|gb|EHC51579.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353596418|gb|EHC53414.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353604464|gb|EHC59242.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353613604|gb|EHC65667.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353619205|gb|EHC69671.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353624456|gb|EHC73489.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353633827|gb|EHC80541.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353647152|gb|EHC90349.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353649704|gb|EHC92267.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353650935|gb|EHC93164.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|357206089|gb|AET54135.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357958256|gb|EHJ82946.1| Chemotaxis regulator CheY [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363554714|gb|EHL38948.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363557277|gb|EHL41484.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363566271|gb|EHL50288.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363568347|gb|EHL52330.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363569842|gb|EHL53791.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363572788|gb|EHL56676.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363575159|gb|EHL59017.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366056096|gb|EHN20427.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366059846|gb|EHN24113.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366063903|gb|EHN28114.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366075336|gb|EHN39393.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366075668|gb|EHN39720.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366078237|gb|EHN42242.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366082197|gb|EHN46134.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366827482|gb|EHN54388.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372204377|gb|EHP17905.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|374352989|gb|AEZ44750.1| hypothetical protein STBHUCCB_10310 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|379052981|gb|EHY70872.1| chemotaxis protein CheY [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379986222|emb|CCF87630.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|380463416|gb|AFD58819.1| chemotaxis protein CheY [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381294430|gb|EIC35569.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381302647|gb|EIC43679.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381302956|gb|EIC43985.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381314200|gb|EIC54974.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381318619|gb|EIC59339.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383798797|gb|AFH45879.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|392615110|gb|EIW97550.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392615172|gb|EIW97611.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392732534|gb|EIZ89745.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392741776|gb|EIZ98871.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742328|gb|EIZ99418.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392748681|gb|EJA05667.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392755941|gb|EJA12840.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392757634|gb|EJA14520.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392760778|gb|EJA17613.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392760947|gb|EJA17778.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392770307|gb|EJA27035.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392773554|gb|EJA30250.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392774848|gb|EJA31543.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392783344|gb|EJA39969.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392786933|gb|EJA43481.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392793268|gb|EJA49712.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392795079|gb|EJA51462.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392797966|gb|EJA54257.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392801018|gb|EJA57248.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392811060|gb|EJA67072.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392813789|gb|EJA69753.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392818454|gb|EJA74338.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392826030|gb|EJA81764.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392831272|gb|EJA86906.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392833365|gb|EJA88980.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392838063|gb|EJA93627.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|395986298|gb|EJH95462.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395987048|gb|EJH96211.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395990402|gb|EJH99533.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395997347|gb|EJI06388.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395997759|gb|EJI06799.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396006637|gb|EJI15600.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396008446|gb|EJI17380.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396010687|gb|EJI19599.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396013809|gb|EJI22696.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396021401|gb|EJI30227.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022562|gb|EJI31375.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396030093|gb|EJI38828.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396039782|gb|EJI48406.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396040996|gb|EJI49619.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396044864|gb|EJI53459.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396051262|gb|EJI59780.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396052915|gb|EJI61420.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396057613|gb|EJI66083.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396062280|gb|EJI70693.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396064968|gb|EJI73351.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396074104|gb|EJI82395.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|402521179|gb|EJW28517.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402522608|gb|EJW29930.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402524889|gb|EJW32186.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402529137|gb|EJW36381.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414018404|gb|EKT02057.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414019080|gb|EKT02705.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414021107|gb|EKT04670.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414032698|gb|EKT15691.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414034573|gb|EKT17499.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414037632|gb|EKT20394.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414047497|gb|EKT29775.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414048990|gb|EKT31217.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414053471|gb|EKT35467.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414059702|gb|EKT41259.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|434941107|gb|ELL47605.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434959404|gb|ELL52874.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434960871|gb|ELL54213.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434964068|gb|ELL57090.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434973924|gb|ELL66312.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434980263|gb|ELL72184.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434986704|gb|ELL78355.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990318|gb|ELL81868.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995077|gb|ELL86394.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|434996376|gb|ELL87692.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435001836|gb|ELL92925.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435009459|gb|ELM00245.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435012296|gb|ELM02975.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435015017|gb|ELM05574.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435016350|gb|ELM06876.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435025856|gb|ELM15987.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435027208|gb|ELM17337.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435032185|gb|ELM22129.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435038401|gb|ELM28182.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435042951|gb|ELM32668.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435048393|gb|ELM37958.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435052222|gb|ELM41724.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435057776|gb|ELM47145.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435062397|gb|ELM51579.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435063631|gb|ELM52779.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435068053|gb|ELM57082.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435079347|gb|ELM68058.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083023|gb|ELM71634.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435084297|gb|ELM72883.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435091063|gb|ELM79464.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435093896|gb|ELM82235.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435096131|gb|ELM84404.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435102809|gb|ELM90912.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435105071|gb|ELM93108.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435109738|gb|ELM97684.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435117091|gb|ELN04803.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435119975|gb|ELN07577.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435125227|gb|ELN12675.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435131144|gb|ELN18371.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435134751|gb|ELN21877.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435138280|gb|ELN25307.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435146194|gb|ELN32988.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435152789|gb|ELN39412.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435155035|gb|ELN41593.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435156792|gb|ELN43263.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435163595|gb|ELN49731.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435168585|gb|ELN54417.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177103|gb|ELN62435.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435184493|gb|ELN69422.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435186041|gb|ELN70897.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435190958|gb|ELN75530.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435191109|gb|ELN75676.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435198641|gb|ELN82798.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435201896|gb|ELN85766.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435213218|gb|ELN96132.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435214252|gb|ELN97077.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435219276|gb|ELO01639.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435221358|gb|ELO03631.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435233063|gb|ELO14120.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435234555|gb|ELO15409.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435238775|gb|ELO19395.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435244992|gb|ELO25099.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435245196|gb|ELO25283.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435260891|gb|ELO40080.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435261032|gb|ELO40194.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435261266|gb|ELO40427.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435264673|gb|ELO43576.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435265987|gb|ELO44781.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435279661|gb|ELO57406.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435282957|gb|ELO60555.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435287955|gb|ELO65056.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435290778|gb|ELO67677.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435298528|gb|ELO74743.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435299174|gb|ELO75342.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435306341|gb|ELO81656.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435316632|gb|ELO89745.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435324781|gb|ELO96709.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435330000|gb|ELP01289.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435330547|gb|ELP01813.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435337487|gb|ELP07046.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|436412943|gb|ELP10881.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436415535|gb|ELP13454.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436418151|gb|ELP16037.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444843751|gb|ELX69004.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444843860|gb|ELX69107.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444857298|gb|ELX82311.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444857552|gb|ELX82557.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444863177|gb|ELX88006.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444865114|gb|ELX89894.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444872706|gb|ELX97024.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444875670|gb|ELX99867.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444884292|gb|ELY08133.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|444887460|gb|ELY11157.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|451908889|gb|AGF80695.1| chemotaxis regulatory protein CheY [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 129
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
II+D+ MP M G ELLK I+ S +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---IISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ + R++I LL+ S V AV G +A + L A +++LI+
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKK---------APELDLIL 79
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E + + +PV++MSS D ++ C+ +GA ++++KP++
Sbjct: 80 TEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIR 136
>gi|298159660|gb|EFI00703.1| Sensory box/GGDEF family protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 705
Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG L + L +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K S +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKPV 110
>gi|183220358|ref|YP_001838354.1| putative two-component response regulator [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910473|ref|YP_001962028.1| two component response regulator sensor histidine kinase/response
regulator subunits [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775149|gb|ABZ93450.1| Sensor histidine kinase and response regulator of a two component
complex [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778780|gb|ABZ97078.1| Putative two-component response regulator; putative membrane
protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 1065
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 37 QCTGAPTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHV 96
+ T A F F+ L + I + Q E F N F ++L V
Sbjct: 636 ESTPAEGSMFSFSLPLAREGEIPMEKPQLKKSEMWFGGDNFEFEPIEETQEELEGEKLRV 695
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
+ VDD ++R++++ L + C+V +G A++ + +G L++ D
Sbjct: 696 IVVDDEPINRQVLKNHLTLIGCEVREAANGVDAIRLVRDEG----------PFELMVLDI 745
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM+GY++ ++ES ++P++ +++++ + I + LE G +Y+ KP
Sbjct: 746 MMPGMSGYDVCTVLRESYSLYQLPILFLTAKNQIADIIAALEAGGNDYLAKP 797
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+ VL V+D R +L+ V AVE+G +AL L V A K +L+
Sbjct: 5 EVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVL--------VANHA-KFDLV 55
Query: 153 ITDYTMPGMTGYELLKKI-KESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+ D +P MTG ELL +I K S+ +P+V+ SS + + + SCL +GA++Y++KP+++
Sbjct: 56 LCDVMLPVMTGIELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQV 115
Query: 212 S 212
+
Sbjct: 116 N 116
>gi|56752288|ref|YP_172989.1| two-component response regulator [Synechococcus elongatus PCC 6301]
gi|56687247|dbj|BAD80469.1| two-component response regulator [Synechococcus elongatus PCC 6301]
Length = 411
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L +D+ ++R ++ER L+ V V SG AL L + FD L+
Sbjct: 174 RLLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQL------AQQPFD-----LLFL 222
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MPG+TG+E+L+++K E+PV+++S+ D L + CL GA +Y+ KP
Sbjct: 223 DLMMPGLTGFEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYLTKP 276
>gi|397691109|ref|YP_006528363.1| response regulator receiver protein [Melioribacter roseus P3M]
gi|395812601|gb|AFN75350.1| response regulator receiver protein [Melioribacter roseus P3M]
Length = 121
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DDS RK + L ++ A G AL+ L + K++L+ITD
Sbjct: 5 ILVADDSPTIRKFVSVALSTKGYEIIACADGMEALEKLPGN-----------KIDLLITD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + G++L+K I+E+ ++E+P++++SS I LE GA Y++KP
Sbjct: 54 LNMPNIDGFQLIKSIRENEEYKELPIIVLSSLGSSEDIHRGLEYGANSYLIKP 106
>gi|388259239|ref|ZP_10136413.1| multi-sensor hybrid histidine kinase [Cellvibrio sp. BR]
gi|387937197|gb|EIK43754.1| multi-sensor hybrid histidine kinase [Cellvibrio sp. BR]
Length = 971
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 37 QCTGAPTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHV 96
C G RF A ++ H + K R E+ F R + A L +
Sbjct: 660 NCLG--RSRFFEAINIALGHITIAKPLTRGYHEQDFMPPAR--------SDALAQNRLLL 709
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
LA +D+ ++K+I R L + V V +G A L A + L+ITD
Sbjct: 710 LA-EDNETNQKVITRQLALLGYAVDVVSNGEEAFDRL-----------TAERYALLITDI 757
Query: 157 TMPGMTGYELLKKIKESS-VFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP M GY L+ K++ ++ F ++P++ +S+ + ++D C + GA EY+VKP L D
Sbjct: 758 HMPVMDGYRLIAKVRAANRAFNKIPIIALSANALREEVDKCKQLGANEYLVKPALLHD 815
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ + R++I LL+ S V AV G +A + L A +++LI+
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKK---------APELDLIL 79
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL I E + + +PV++MSS D ++ C+ +GA ++++KP++
Sbjct: 80 TEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIR 136
>gi|325284790|ref|YP_004264253.1| CheA signal transduction histidine kinase [Deinococcus proteolyticus
MRP]
gi|324316279|gb|ADY27393.1| CheA signal transduction histidine kinase [Deinococcus proteolyticus
MRP]
Length = 1136
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
+ AE + VL VDDS R+L+ R+L+ +V G AL L LD
Sbjct: 1007 SAAEIRRAARVLLVDDSLSVRRLVSRMLERGGYEVVTANDGQEALDLLQLD--------- 1057
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
+ +L+I+D MP M GYELL ++ +P+V+M++ + GA +Y
Sbjct: 1058 -TRFDLVISDLEMPRMNGYELLSALRGRPATAALPLVVMTTRAGEKHQRLAFQLGANDYF 1116
Query: 206 VKPV 209
KPV
Sbjct: 1117 SKPV 1120
>gi|157834748|pdb|2CHE|A Chain A, Structure Of The Mg2+-Bound Form Of Chey And Mechanism Of
Phosphoryl Transfer In Bacterial Chemotaxis
gi|157834749|pdb|2CHF|A Chain A, Structure Of The Mg2+-Bound Form Of Chey And The Mechanism
Of Phosphoryl Transfer In Bacterial Chemotaxis
gi|165760958|pdb|2PL9|A Chain A, Crystal Structure Of Chey-Mg(2+)-Bef(3)(-) In Complex With
Chez(C19) Peptide Solved From A P2(1)2(1)2 Crystal
gi|165760959|pdb|2PL9|B Chain B, Crystal Structure Of Chey-Mg(2+)-Bef(3)(-) In Complex With
Chez(C19) Peptide Solved From A P2(1)2(1)2 Crystal
gi|165760960|pdb|2PL9|C Chain C, Crystal Structure Of Chey-Mg(2+)-Bef(3)(-) In Complex With
Chez(C19) Peptide Solved From A P2(1)2(1)2 Crystal
gi|165760965|pdb|2PMC|A Chain A, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
gi|165760966|pdb|2PMC|B Chain B, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
gi|165760967|pdb|2PMC|C Chain C, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
gi|165760968|pdb|2PMC|D Chain D, Crystal Structure Of Chey-mg(2+) In Complex With Chez(c15)
Peptide Solved From A P1 Crystal
Length = 128
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 1 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
II+D+ MP M G ELLK I+ S +PV+++++E I + + GA Y+VKP
Sbjct: 53 ---IISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 109
>gi|71737704|ref|YP_273433.1| sensory box protein/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558257|gb|AAZ37468.1| sensory box protein/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 705
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG L + L +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K S +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKPV 110
>gi|390992972|ref|ZP_10263178.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372552287|emb|CCF70153.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 721
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L +L DD +R +++RLLQ + KVT V+ G + L L ++ FD +
Sbjct: 456 RTLQILVADDHAANRMVLQRLLQKAGHKVTCVDGGEQVLDTL------ADADFD-----V 504
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MPG++G +LLK+++ ++ PVV++S++ I SC + GA ++ KPV
Sbjct: 505 AIVDLHMPGVSGLDLLKQLRVMQAGSQPRTPVVVLSADVTPEAIRSCEQAGAYAFLAKPV 564
>gi|310658191|ref|YP_003935912.1| putative Phosphoserine phosphatase [[Clostridium] sticklandii]
gi|308824969|emb|CBH21007.1| putative Phosphoserine phosphatase [[Clostridium] sticklandii]
Length = 381
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 96 VLAVDDSYVDRKLIERLLQ--ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L VDD+ +RKL+ +L+ I + + E G AL+ + + +V+L+I
Sbjct: 4 ILVVDDTLFNRKLMLEVLETKIDNARYLQAEDGIEALEIVKTN-----------EVDLVI 52
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP GYE+LK++K + ++ ++P+++ SS + I LE GA +Y KP+
Sbjct: 53 LDLMMPNKNGYEVLKELKNNPLYSDIPIIVNSSVTDMDSIKQTLEMGAVDYFTKPL 108
>gi|253701315|ref|YP_003022504.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Geobacter sp. M21]
gi|251776165|gb|ACT18746.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Geobacter sp. M21]
Length = 704
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+ VDD R L L+ S V VE+G +AL+ FDA ++++ D
Sbjct: 13 VMVVDDDQAVRLLARETLESSGFAVRDVENGEQALEE-----------FDAHAPDIVLLD 61
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPG+ G+ + I+ ++ R+ PV++M+ D L ID E GA ++I KP+
Sbjct: 62 VMMPGIDGFSVCSAIRRTASGRDTPVLMMTGLDDLESIDCAYEAGATDFITKPIN 116
>gi|391231317|ref|ZP_10267523.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
gi|391220978|gb|EIP99398.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
Length = 502
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ +R ++ R L+ V G AL+ L A +L++ D
Sbjct: 119 ILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERL-----------RAGPFDLVLLD 167
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + GY L IK V R +PV+++S+ D L + C+E GAE+++ KP
Sbjct: 168 MMMPVLDGYGALDAIKTDPVLRHLPVIMISALDELASVVRCIERGAEDFLPKP 220
>gi|220903605|ref|YP_002478917.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867904|gb|ACL48239.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 126
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ VL VDD R+++ +L QI V + GT A + L + K++ I
Sbjct: 7 MRVLVVDDFSTMRRIVRNILRQIGFQNVVEADDGTTAWEVLNRE-----------KIDFI 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++D+ MP MTG ELL+K++ S F +P +++++E I ++ YIVKP
Sbjct: 56 VSDWNMPNMTGIELLRKVRASEQFAHIPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|395225026|ref|ZP_10403558.1| Response regulator containing a CheY-like receiver domain and a
GGDEF domain CheY [Thiovulum sp. ES]
gi|394446859|gb|EJF07670.1| Response regulator containing a CheY-like receiver domain and a
GGDEF domain CheY [Thiovulum sp. ES]
Length = 121
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L +++ + E G A ++ E ++G ++
Sbjct: 1 MKILVVDDSSTMRRIIKNTLGRLNYKDILEAEHGVEAWAHME---ENKDLG-------ML 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ S F ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRASGEFNDLPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>gi|422597764|ref|ZP_16672033.1| sensory box protein/response regulator [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330988050|gb|EGH86153.1| sensory box protein/response regulator [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 705
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG L + L +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K S +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKASKSTANIPIIMLSALDEHSARLSGLEAGAEEYLNKPV 110
>gi|268679227|ref|YP_003303658.1| response regulator receiver [Sulfurospirillum deleyianum DSM 6946]
gi|268617258|gb|ACZ11623.1| response regulator receiver [Sulfurospirillum deleyianum DSM 6946]
Length = 126
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K+L +LAVDD +++ KLI +L+ + V + T L + L Q ++ +L
Sbjct: 3 KKLKILAVDDDFINLKLISSMLR-KNQTVDVIMEATNGLDAINLLKTQGDI-------DL 54
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++ D MP M G E L I+ F+++P++++++++ T+ + E GA +++VKP++
Sbjct: 55 VLLDIKMPVMDGIEFLTNIQSMLEFKKIPIIVLTTDE--TRKNEAFEHGAFDFLVKPIRE 112
Query: 212 SD 213
+D
Sbjct: 113 ND 114
>gi|410097224|ref|ZP_11292206.1| hypothetical protein HMPREF1076_01384 [Parabacteroides goldsteinii
CL02T12C30]
gi|409224542|gb|EKN17474.1| hypothetical protein HMPREF1076_01384 [Parabacteroides goldsteinii
CL02T12C30]
Length = 1360
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ + +E+ LQ + A+ +G AL+ + D +++I+D
Sbjct: 1114 ILLVDDNQEVLEYLEQQLQHDYIVMKAI-NGKDALEQI-----------DKTYPHIVISD 1161
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
MP M G EL ++IKE F +PV++++++ +++QI+ LE GA++YIVKP +S
Sbjct: 1162 VMMPEMNGLELCRRIKEDQNFCHIPVILLTAKSMVSQIEEGLEAGADDYIVKPFHVS 1218
>gi|290790028|pdb|3H1G|A Chain A, Crystal Structure Of Chey Mutant T84a Of Helicobacter
Pylori
Length = 129
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 6 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 56 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKP 111
>gi|320103100|ref|YP_004178691.1| response regulator receiver modulated metal dependent
phosphohydrolase [Isosphaera pallida ATCC 43644]
gi|319750382|gb|ADV62142.1| response regulator receiver modulated metal dependent
phosphohydrolase [Isosphaera pallida ATCC 43644]
Length = 410
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++ ++L VDD D LL ++ +T G RA +L DGEQ+ + +L
Sbjct: 36 EQANILIVDDRRTD------LLLMAEMVLTL---GHRA--FLAEDGEQAMIQARRHPPDL 84
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+ D MP M G L+++K+ V++ +PVV++S D +I CL+ GA++YI KP
Sbjct: 85 ILLDLNMPVMDGRRTLERLKDHPVYKGIPVVVVSGVDNTEEIARCLQAGADDYITKP 141
>gi|81300624|ref|YP_400832.1| response regulator receiver domain-containing protein
[Synechococcus elongatus PCC 7942]
gi|81169505|gb|ABB57845.1| response regulator receiver domain protein (CheY-like)
[Synechococcus elongatus PCC 7942]
Length = 411
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L +D+ ++R ++ER L+ V V SG AL L + FD L+
Sbjct: 174 RLLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQL------AQQPFD-----LLFL 222
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MPG+TG+E+L+++K E+PV+++S+ D L + CL GA +Y+ KP
Sbjct: 223 DVMMPGLTGFEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYLTKP 276
>gi|384496007|gb|EIE86498.1| hypothetical protein RO3G_11209 [Rhizopus delemar RA 99-880]
Length = 2934
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 14/134 (10%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A+ + A + L VL +D+ V++KL R+L+ VT V +G A++
Sbjct: 2653 ALPSDASKTVPLEVLLAEDNDVNQKLAVRILEKFGHHVTVVANGKLAVE----------- 2701
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKE---SSVFREVPVVIMSSEDVLTQIDSCLEE 199
+++ +LI+ D MP M G+E +KI+E +S R +P++ +++ ++ + CLE
Sbjct: 2702 AYESQYFDLILMDVQMPVMGGFEATQKIREIEKTSSNRHIPIIALTAHAMIGDREKCLEA 2761
Query: 200 GAEEYIVKPVKLSD 213
G +EY+ KP++ +
Sbjct: 2762 GMDEYVTKPLRFPE 2775
>gi|119490790|ref|ZP_01623122.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
gi|119453774|gb|EAW34932.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
Length = 1111
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E S E +L VDD V+ ++I L + + +T +G AL + GF K
Sbjct: 711 EDSGEFKILVVDDEPVNIQVIANNLSLQNYAITQATNGLEALTLI-------EKGF---K 760
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LI+ D MP MTGYE+ +K++E + E+P++++++++ +T + L GA +Y+ KP
Sbjct: 761 PDLILLDVMMPRMTGYEVCQKLREKYLHSELPILMLTAKNQVTDLVDGLSSGANDYLSKP 820
>gi|290790025|pdb|3GWG|A Chain A, Crystal Structure Of Chey Of Helicobacter Pylori
gi|290790026|pdb|3H1E|A Chain A, Crystal Structure Of Mg(2+) And Beh(3)(-)-Bound Chey Of
Heli Pylori
Length = 129
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 6 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 56 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 111
>gi|313127593|ref|YP_004037863.1| chemotaxis protein CheY [Halogeometricum borinquense DSM 11551]
gi|448285363|ref|ZP_21476607.1| chemotaxis protein CheY [Halogeometricum borinquense DSM 11551]
gi|312293958|gb|ADQ68418.1| CheY-like receiver domain-containing protein [Halogeometricum
borinquense DSM 11551]
gi|445576933|gb|ELY31380.1| chemotaxis protein CheY [Halogeometricum borinquense DSM 11551]
Length = 152
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGLDGEQSNVGFD 145
A+ ++ + +L V+D+ D +L E+ LQ + + V +G AL++L Q N D
Sbjct: 3 AKDNEPIEILLVEDNPGDVRLTEKGLQKGNVTNNLHVVPNGIEALEFL----RQENEYAD 58
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
A + +LI+ D MP M G E+L++IK S + +PVV++SS D I + A Y+
Sbjct: 59 APRPDLILLDLDMPKMGGKEVLREIKTDSDLKRLPVVVLSSSDAEEDIAKSYDLHANAYL 118
Query: 206 VKPV 209
KPV
Sbjct: 119 TKPV 122
>gi|372273230|ref|ZP_09509278.1| response regulator receiver protein [Marinobacterium stanieri S30]
Length = 128
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 12/118 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
K++ +L VDD R++I+ LL+ + V + G AL L +Q ++ F
Sbjct: 3 KDIKILVVDDFSTMRRIIKNLLRDLGFTNVEEADDGKTALPIL----QQGHIEF------ 52
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ITD+ MPGMTG +LLK ++ ++PV+++++E QI + + G Y+VKP
Sbjct: 53 -LITDWNMPGMTGIDLLKTVRADPSLSQIPVLMVTAEAKREQIIAAAQAGVNGYVVKP 109
>gi|365881455|ref|ZP_09420765.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 375]
gi|365290370|emb|CCD93296.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 375]
Length = 498
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + VE+G ++ L DA V+ I+ D
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL--------TNPDASPVDAIVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L K++E+ + +PV++ ++ + + S + GA++++VKPV +
Sbjct: 57 LVMPGLDGMGVLSKMREAGI--SIPVIVQTAHGGIDNVVSAMRAGAQDFVVKPVGI 110
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+ R+++ LL+ +V AV G +A + + A +L
Sbjct: 53 RSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMR---------GRAYAFDL 103
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G +LL +I + + +PV++MSS+D + + C+++GA +++VKPV+
Sbjct: 104 VLTEVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVR 162
>gi|365887891|ref|ZP_09426704.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3809]
gi|365336492|emb|CCD99235.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3809]
Length = 498
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + VE+G ++ L DA V+ I+ D
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL--------TNPDASPVDAIVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L K++E+ + +PV++ ++ + + S + GA++++VKPV +
Sbjct: 57 LVMPGLDGMGVLSKMREAGI--SIPVIVQTAHGGIDNVVSAMRAGAQDFVVKPVGI 110
>gi|207092642|ref|ZP_03240429.1| chemotaxis protein [Helicobacter pylori HPKX_438_AG0C1]
gi|419418750|ref|ZP_13959053.1| Chemotactic response regulator, two-component system [Helicobacter
pylori NCTC 11637 = CCUG 17874]
gi|2199516|gb|AAB66375.1| chemotaxis response regulator [Helicobacter pylori]
gi|384373639|gb|EIE29109.1| Chemotactic response regulator, two-component system [Helicobacter
pylori NCTC 11637 = CCUG 17874]
Length = 124
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>gi|374603703|ref|ZP_09676679.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
gi|374390674|gb|EHQ62020.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
Length = 995
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+H+LAVDD V+ ++ +L +T V+S L+ LG + +L+
Sbjct: 666 NIHILAVDDDPVNLNVLVGILSTEPYTITTVQSAREVLELLGTQ-----------QWDLL 714
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I D MP M+GYEL ++++E E+P++++++ I + GA +Y+ KPV
Sbjct: 715 IADVMMPHMSGYELTQRVREHYSVSELPILLLTARSQPADIYTGFSAGANDYVTKPV 771
>gi|15645681|ref|NP_207858.1| chemotaxis protein (cheY) [Helicobacter pylori 26695]
gi|108562805|ref|YP_627121.1| chemotaxis protein [Helicobacter pylori HPAG1]
gi|208434327|ref|YP_002265993.1| chemotaxis protein [Helicobacter pylori G27]
gi|254779070|ref|YP_003057175.1| Chemotactic response regulator, two-component system [Helicobacter
pylori B38]
gi|298736679|ref|YP_003729207.1| chemotaxis family two-component system response regulator CheY
[Helicobacter pylori B8]
gi|308182549|ref|YP_003926676.1| Chemotactic response regulator, two-component system [Helicobacter
pylori PeCan4]
gi|308184182|ref|YP_003928315.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SJM180]
gi|385218665|ref|YP_005780140.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Gambia94/24]
gi|385220219|ref|YP_005781691.1| Chemotactic response regulator, two-component system [Helicobacter
pylori India7]
gi|385226636|ref|YP_005786560.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SNT49]
gi|386745884|ref|YP_006219101.1| Chemotactic response regulator, two-component system [Helicobacter
pylori HUP-B14]
gi|410024295|ref|YP_006893548.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif1]
gi|410502061|ref|YP_006936588.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif2]
gi|410682581|ref|YP_006934983.1| Chemotactic response regulator, two-component system [Helicobacter
pylori 26695]
gi|419416650|ref|ZP_13957182.1| Chemotactic response regulator, two-component system [Helicobacter
pylori P79]
gi|444374577|ref|ZP_21173882.1| Chemotactic response regulator, two-component system [Helicobacter
pylori A45]
gi|2500738|sp|P71403.2|CHEY_HELPY RecName: Full=Chemotaxis protein CheY homolog
gi|2314217|gb|AAD08113.1| chemotaxis protein (cheY) [Helicobacter pylori 26695]
gi|4103138|gb|AAD01682.1| CheY [Helicobacter pylori NCTC 11637 = CCUG 17874]
gi|107836578|gb|ABF84447.1| chemotaxis protein [Helicobacter pylori HPAG1]
gi|208432256|gb|ACI27127.1| chemotaxis protein [Helicobacter pylori G27]
gi|254000981|emb|CAX28925.1| Chemotactic response regulator, two-component system [Helicobacter
pylori B38]
gi|281429784|gb|ADA70031.1| CheY [Helicobacter pylori SS1]
gi|298355871|emb|CBI66743.1| two-component system, chemotaxis family, response regulator CheY
[Helicobacter pylori B8]
gi|308060102|gb|ADO01998.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SJM180]
gi|308064734|gb|ADO06626.1| Chemotactic response regulator, two-component system [Helicobacter
pylori PeCan4]
gi|317009026|gb|ADU79606.1| Chemotactic response regulator, two-component system [Helicobacter
pylori India7]
gi|317013823|gb|ADU81259.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Gambia94/24]
gi|344331549|gb|AEN16579.1| Chemotactic response regulator, two-component system [Helicobacter
pylori SNT49]
gi|384374833|gb|EIE30192.1| Chemotactic response regulator, two-component system [Helicobacter
pylori P79]
gi|384552133|gb|AFI07081.1| Chemotactic response regulator, two-component system [Helicobacter
pylori HUP-B14]
gi|409894222|gb|AFV42280.1| Chemotactic response regulator, two-component system [Helicobacter
pylori 26695]
gi|409895952|gb|AFV43874.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif1]
gi|409897612|gb|AFV45466.1| Chemotactic response regulator, two-component system [Helicobacter
pylori Rif2]
gi|443620880|gb|ELT81321.1| Chemotactic response regulator, two-component system [Helicobacter
pylori A45]
Length = 124
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>gi|329896811|ref|ZP_08271727.1| Adenylate cyclase [gamma proteobacterium IMCC3088]
gi|328921566|gb|EGG28946.1| Adenylate cyclase [gamma proteobacterium IMCC3088]
Length = 452
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD +R ++ RLL V +SG AL+ L +++++ D
Sbjct: 101 ILVVDDQNDNRAVLNRLLSRVGHTVYTADSGEAALEQLSTQA-----------IDVVLLD 149
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+MPGM G L KIK R +PV+++S L + C+ GA++Y+ KP
Sbjct: 150 LSMPGMGGKTALTKIKADPKLRSIPVIVISGHQELDSVVECITAGADDYLFKP 202
>gi|429217975|ref|YP_007179619.1| chemotaxis protein histidine kinase-like protein [Deinococcus
peraridilitoris DSM 19664]
gi|429128838|gb|AFZ65853.1| chemotaxis protein histidine kinase-like protein [Deinococcus
peraridilitoris DSM 19664]
Length = 935
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A TVA S+ +L +DDS R+++ R+L+ V G AL+ L +S+
Sbjct: 799 AWPTVAVSSRRQRLLLIDDSVSVRRVVARMLERGGFDVVTASDGYDALELL-----RSDT 853
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
FDA ++TD MP ++GYE++++++ S +PV++M++ + GA
Sbjct: 854 DFDA-----VLTDLEMPRVSGYEVIEEVRRRSSTAHLPVIVMTTRAGDKHQQLAMSLGAN 908
Query: 203 EYIVKPV 209
EY KP+
Sbjct: 909 EYFSKPI 915
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+ VL V+D R +L+ V AVE+G +AL L + K +L+
Sbjct: 5 EVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLLVTNHA---------KFDLV 55
Query: 153 ITDYTMPGMTGYELLKKI-KESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+ D +P MTG ELL +I K S+ +P+V+ SS + + + SCL +GA++Y++KP+++
Sbjct: 56 LCDVMLPVMTGIELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQV 115
Query: 212 S 212
+
Sbjct: 116 N 116
>gi|115526099|ref|YP_783010.1| two component sigma54 specific Fis family transcriptional regulator
[Rhodopseudomonas palustris BisA53]
gi|115520046|gb|ABJ08030.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisA53]
Length = 495
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VL VDD V R+L+E ++Q + V++G A+ L + DA ++ ++
Sbjct: 4 RVLIVDDDPVQRRLVENMVQRCGYEAIVVDNGDAAIARLTAE--------DAPAIDALVL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MPG+ G +L K++E+ + VPV++ ++ + + S + GA++++VKPV +
Sbjct: 56 DLVMPGLDGMGVLSKMREAGL--AVPVIVQTAHGGIDNVVSAMRAGAQDFVVKPVGI 110
>gi|335424073|ref|ZP_08553090.1| chemotaxis regulatory protein CheY [Salinisphaera shabanensis
E1L3A]
gi|334890503|gb|EGM28770.1| chemotaxis regulatory protein CheY [Salinisphaera shabanensis
E1L3A]
Length = 129
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K L+ L VDD R+++ LL ++ V E G AL+ L N G K
Sbjct: 2 ADKNLNFLVVDDFSTMRRIVRNLLKELGYNNVEEAEDGVDALEKL-------NTG----K 50
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++D+ MP + G E+LK+I+ S +++PV+++++E I + + GA Y+VKP
Sbjct: 51 FQFVVSDWNMPNLDGLEMLKRIRASDTLKDLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|289548281|ref|YP_003473269.1| response regulator receiver protein [Thermocrinis albus DSM 14484]
gi|289181898|gb|ADC89142.1| response regulator receiver protein [Thermocrinis albus DSM 14484]
Length = 129
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
KE L VDD RK+++ LL Q+ V E+G AL L + +D
Sbjct: 4 KEAKFLVVDDMSTMRKIVKTLLNQLGYTNVDEAENGRDALAKL------RSSSYD----- 52
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
L++ D+ MP M G ELLK I+ R +PV+++++E + + ++ GA YIVKP
Sbjct: 53 LVLLDWNMPEMDGLELLKAIRADDSLRHIPVIMITAEAKKENVLAAIQAGANNYIVKPFT 112
Query: 211 L 211
L
Sbjct: 113 L 113
>gi|85859036|ref|YP_461238.1| chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722127|gb|ABC77070.1| chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 145
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+V+ VDDS R +I +++ +S K+ A +E+G G+++ D+ V++I
Sbjct: 5 FNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGN---------GKEAMTLLDSNWVDVI 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++D MP M G ELL ++K+ +F+E+PV+++++E +++ GA+ +I KP
Sbjct: 56 LSDINMPEMNGLELLSRLKQDDLFKEIPVIMITTEGSSPRMEEAFRYGAKGFIKKP 111
>gi|210134575|ref|YP_002301014.1| chemotaxis protein [Helicobacter pylori P12]
gi|383749979|ref|YP_005425082.1| chemotaxis protein [Helicobacter pylori ELS37]
gi|384897114|ref|YP_005772542.1| chemotaxis protein [Helicobacter pylori Lithuania75]
gi|210132543|gb|ACJ07534.1| chemotaxis protein [Helicobacter pylori P12]
gi|317012219|gb|ADU82827.1| chemotaxis protein [Helicobacter pylori Lithuania75]
gi|380874725|gb|AFF20506.1| chemotaxis protein [Helicobacter pylori ELS37]
Length = 124
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRADSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>gi|153003413|ref|YP_001377738.1| GAF sensor hybrid histidine kinase [Anaeromyxobacter sp. Fw109-5]
gi|152026986|gb|ABS24754.1| GAF sensor hybrid histidine kinase [Anaeromyxobacter sp. Fw109-5]
Length = 1816
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 69 EKKFKETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTR 128
+ + E R A A + SK+ +L VDD + I LL+ V E+G R
Sbjct: 1663 DAELPERKRALVRAATADTSLVSKK--ILIVDDDVRNVFAITALLEQHGASVVYAENGRR 1720
Query: 129 ALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSED 188
L+ L ++N G V+L++ D MP + GYE ++ I+ F +P++ ++++
Sbjct: 1721 GLEVL-----KANPG-----VDLVLMDVMMPELDGYETMRAIRHLPEFERLPIIALTAKA 1770
Query: 189 VLTQIDSCLEEGAEEYIVKPVK 210
+ + C+E GA +Y+ KPVK
Sbjct: 1771 MKGDREKCVESGASDYVTKPVK 1792
>gi|23014940|ref|ZP_00054733.1| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
MS-1]
Length = 1179
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD + + ++L+ KV + GT+AL L + V+LI+ D
Sbjct: 1054 VLLVDDDMRNAFALSKVLRTKGLKVLIAQDGTKALSQLRSRSD----------VDLILLD 1103
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPGM GY+ + +I++ + +P++ ++++ + D CL GA++Y+ KPV +
Sbjct: 1104 IMMPGMDGYQTMGEIRKDPRYAHLPIIALTAKAMAGDRDRCLASGADDYLTKPVDV 1159
>gi|325680257|ref|ZP_08159819.1| diguanylate cyclase (GGDEF) domain protein [Ruminococcus albus 8]
gi|324108074|gb|EGC02328.1| diguanylate cyclase (GGDEF) domain protein [Ruminococcus albus 8]
Length = 570
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 12/116 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD Y+ R+++ R+L+ +V+ E+G AL S + D LK++L+I D
Sbjct: 15 ILIVDDDYIAREILGRMLE-DRYEVSYAENGVIAL---------SIIKRDKLKLSLVILD 64
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MP M GY LLK + + R +PV++++SE +++S L GA ++I KP +
Sbjct: 65 LNMPEMDGYSLLKLLSSDNELRRIPVIVLTSEKG-AEVES-LRIGAADFITKPFDM 118
>gi|160889438|ref|ZP_02070441.1| hypothetical protein BACUNI_01862 [Bacteroides uniformis ATCC 8492]
gi|317479949|ref|ZP_07939064.1| response regulator receiver domain-containing protein [Bacteroides
sp. 4_1_36]
gi|156860955|gb|EDO54386.1| response regulator receiver domain protein [Bacteroides uniformis
ATCC 8492]
gi|316903894|gb|EFV25733.1| response regulator receiver domain-containing protein [Bacteroides
sp. 4_1_36]
Length = 119
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L VDD K++ L ++ E RA+++L E + LII+
Sbjct: 3 QILFVDDKPAIGKVLSVYLG-KENELVYFEDPVRAIEWLNEGNEPA----------LIIS 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP MTG E L +K +S+F+++PVV++SSE+ T+ + LE GAE++I+KP
Sbjct: 52 DIRMPKMTGSEFLAYLKSNSLFKDIPVVMLSSEESTTERINLLEAGAEDFILKP 105
>gi|297621214|ref|YP_003709351.1| transcriptional regulator [Waddlia chondrophila WSU 86-1044]
gi|297376515|gb|ADI38345.1| putative transcriptional regulator [Waddlia chondrophila WSU
86-1044]
gi|337293439|emb|CCB91428.1| putative transcriptional regulator [Waddlia chondrophila 2032/99]
Length = 129
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+E +L V+D +++ ++I +L+ C V +G AL D N +DA
Sbjct: 4 QEYRILVVEDHFINLEMISEMLKRLGCIVDTASNGKEAL-----DCVTKNF-YDA----- 52
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
I D MP M GYE + I+E +++P++ +++ V + +D CLE G + Y+ KP +L
Sbjct: 53 IFMDLQMPVMDGYETTRLIREDKTRQKIPIIALTANHVKSDLDRCLESGMDGYLTKPFEL 112
Query: 212 SD 213
D
Sbjct: 113 KD 114
>gi|392552009|ref|ZP_10299146.1| chemotaxis protein [Pseudoalteromonas spongiae UST010723-006]
Length = 127
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQEFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADDSLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 109
>gi|323139254|ref|ZP_08074308.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
gi|322395475|gb|EFX98022.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
Length = 539
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 80 PFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ 139
P T + S +L VDD+ +R L++R L+ V E+G+ AL +
Sbjct: 180 PISERETDSAASLPSRILVVDDNASNRDLLKRRLERQGHAVVLAENGSSALAIV------ 233
Query: 140 SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
FD L++ D MP ++G+++L +K R++PV+++S+ + + I C+E
Sbjct: 234 KQAQFD-----LVLLDLLMPDISGFDVLSILKSDLSLRDIPVIMISALNEIDTIVRCIEA 288
Query: 200 GAEEYIVKP 208
GAE+Y+ KP
Sbjct: 289 GAEDYLAKP 297
>gi|429333050|ref|ZP_19213757.1| two-component response regulator CheY [Pseudomonas putida CSV86]
gi|428762262|gb|EKX84469.1| two-component response regulator CheY [Pseudomonas putida CSV86]
Length = 128
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+KE+ +L VDD R++I+ LL+ + + GT AL L N F
Sbjct: 1 MNKEMKILIVDDFSTMRRIIKNLLRDLGFTNTHEADDGTTALPML----HSGNFDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG +LL+++++ + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMTGIDLLREVRKDEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 109
>gi|163750531|ref|ZP_02157769.1| chemotaxis protein CheY [Shewanella benthica KT99]
gi|161329686|gb|EDQ00675.1| chemotaxis protein CheY [Shewanella benthica KT99]
Length = 127
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + + GT AL L ++ N F
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFSNTQEADDGTTALPML----QKGNFDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LLK I+ + +PV+++++E QI + + G Y+VKP
Sbjct: 53 ---VVTDWNMPGMQGIDLLKAIRADDQLKNIPVLMVTAEAKREQIIAAAQAGVNGYVVKP 109
>gi|357010943|ref|ZP_09075942.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 1037
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 42 PTQRFPFAYSLTQTHNILTKTHQRLVKEKKF---KETNRGFPFWAMATVAECSKELHVLA 98
P + F+++L H L+ + E ++ +R +P A + ++++LA
Sbjct: 649 PGRGSVFSFALPLEHTSLSHHAEEDKAEGGLSLSEDLSRVWPDLPTAAPSFAGDKMNILA 708
Query: 99 VDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTM 158
VDD V+ K++ +L V V SG AL+ L D +L+I D M
Sbjct: 709 VDDDPVNLKVLVGILSTEPYHVRTVSSGQEALELL-----------DTEPWDLLIADVMM 757
Query: 159 PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
P M+GYEL ++++ E+PV+++++ I + GA +Y+ KPV
Sbjct: 758 PHMSGYELTRRVRTHYSISELPVLLLTARSQPADIYTGFLSGANDYVTKPV 808
>gi|157834319|pdb|1YMV|A Chain A, Signal Transduction Protein Chey Mutant With Phe 14
Replaced By Gly, Ser 15 Replaced By Gly, And Met 17
Replaced By Gly
Length = 129
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 SDKELKFLVVDDGGTGRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGYGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|392309726|ref|ZP_10272260.1| chemotaxis protein [Pseudoalteromonas citrea NCIMB 1889]
Length = 127
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQEFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADDSLKHIPVLMVTAEAKKEQIVAAAQAGVNGYIVKP 109
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L ++LI+
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHN---------IDLIL 90
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++G+ LL + E + + +PV++MSS + + C+ GA +++VKPV+ ++
Sbjct: 91 TEVELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNE 150
>gi|408788802|ref|ZP_11200516.1| two component response regulator [Rhizobium lupini HPC(L)]
gi|408485240|gb|EKJ93580.1| two component response regulator [Rhizobium lupini HPC(L)]
Length = 440
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+++ VL VDD+ R + +L+ + KV+ SG RAL+ L D +
Sbjct: 131 NRQFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILAQDP----------SIQ 180
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVV-IMSSEDVLTQIDSCLEEGAEEYIVKP 208
L+ITDY MP M GYEL ++I++S ++ V+ I SS D L S L+ GA +++ +P
Sbjct: 181 LVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSA-SFLKAGASDFVYRP 238
>gi|424909943|ref|ZP_18333320.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845974|gb|EJA98496.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 440
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+++ VL VDD+ R + +L+ + KV+ SG RAL+ L D +
Sbjct: 131 NRQFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILAQDP----------SIQ 180
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVV-IMSSEDVLTQIDSCLEEGAEEYIVKP 208
L+ITDY MP M GYEL ++I++S ++ V+ I SS D L S L+ GA +++ +P
Sbjct: 181 LVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSA-SFLKAGASDFVYRP 238
>gi|428210719|ref|YP_007083863.1| serine phosphatase RsbU, regulator of sigma subunit [Oscillatoria
acuminata PCC 6304]
gi|427999100|gb|AFY79943.1| serine phosphatase RsbU, regulator of sigma subunit [Oscillatoria
acuminata PCC 6304]
Length = 970
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
+A +L VDD ++ +++ +L + + V ++G AL+ L + GF
Sbjct: 587 VIASHKGSAKLLIVDDEPINLQVLVNMLSLQNYTVIQAKNGLDALELL-------HKGF- 638
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
K +L++ D MP MTGYE+ +KI+E+ E+PV+++++++ L+ + + E GA +Y+
Sbjct: 639 --KPDLVLLDVMMPKMTGYEVTQKIRETWQASEMPVLLLTAKNQLSDLVAGFESGANDYL 696
Query: 206 VKPVK 210
KPV+
Sbjct: 697 TKPVE 701
>gi|384250534|gb|EIE24013.1| hypothetical protein COCSUDRAFT_65695 [Coccomyxa subellipsoidea
C-169]
Length = 1818
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL VD R+ + LL+ + +V V+S ALQ L +Q+ G A V+L
Sbjct: 749 QSLRVLVVDSKASARQEVVALLRKCTYQVMEVKSTAEALQLL--KDQQARDG--APGVDL 804
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
I+ ++ P LL++ E V R VPVV+MSS++ + +CL+ GA +Y+++P++
Sbjct: 805 ILKEHDPPAANACRLLRRTLEDDVLRTVPVVVMSSQEDRDVMVACLQLGAADYMIRPLR 863
>gi|359434553|ref|ZP_09224816.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20652]
gi|357918762|dbj|GAA61065.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20652]
Length = 299
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
SK VL VDD ++R ++E+ L+ + V VE+G +AL ++ +V+
Sbjct: 2 SKRAKVLVVDDDPLNRLVLEKTLK-AEHDVFLVENGEKALTFV-----------KTTQVD 49
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
LII D MPG+ GYE+L ++KE+ + + +PV+ +S+ LE GA +YI KP
Sbjct: 50 LIILDVIMPGIDGYEVLVQLKENPITQAIPVIFISANHSHDDEAKGLELGAMDYITKP 107
>gi|357403439|ref|YP_004915363.1| response regulator receiver protein [Methylomicrobium alcaliphilum
20Z]
gi|351716104|emb|CCE21755.1| Response regulator receiver protein [Methylomicrobium alcaliphilum
20Z]
Length = 134
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L V+D VD ++R + ++ V G +AL+YL G A+ I+
Sbjct: 7 ILLVEDDQVDVMTVQRSFKKLGVLNELLVVHDGEQALEYL----RNPKHGLPAI----IL 58
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP M G+E LK +KE VFR +PV++++S +D C + G YI+KPV
Sbjct: 59 LDINMPKMNGHECLKHLKEHPVFRNIPVMMLTSSKERHDVDRCFDLGISGYILKPV 114
>gi|406893221|gb|EKD38344.1| response regulator, partial [uncultured bacterium]
Length = 249
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCK-VTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R I+ L + + +S +A YLG+ G+ F A +V+LI
Sbjct: 12 MKILIVDDSIHVRLQIQAFLAAGGYRDLIFADSAAQAFAYLGIAGKP----FAAAEVDLI 67
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+ D M G G E + IK S +++VPV++++ ED ++ GA +YI KP++
Sbjct: 68 LMDIQMAGTDGIEATQTIKSKSAYKDVPVLMITGEDTEESLEKAFSAGAVDYITKPLR 125
>gi|373485922|ref|ZP_09576602.1| response regulator receiver [Holophaga foetida DSM 6591]
gi|372012760|gb|EHP13322.1| response regulator receiver [Holophaga foetida DSM 6591]
Length = 124
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L+VDDS R++I R + + + E+G +AL L A ++LII D
Sbjct: 4 ILSVDDSATMRRIIGRAVAVMGYEFLEAENGLQALDLLPQH---------APDLDLIILD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP M G+E L +IK + ++ +PV+++++E T+I ++ GA Y+ KP D
Sbjct: 55 VNMPEMDGFETLTRIKADARYKNIPVMMVTTESDRTRIVQAIQAGAANYVTKPFNQED 112
>gi|336315324|ref|ZP_08570235.1| response regulator with CheY-like receiver [Rheinheimera sp. A13L]
gi|335880301|gb|EGM78189.1| response regulator with CheY-like receiver [Rheinheimera sp. A13L]
Length = 123
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ + V+ + G+ AL L N FD +
Sbjct: 1 MKILVVDDFSTMRRIIKNLLRDLGFTNVSEADDGSTALPML------QNGDFD-----FV 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGM G +LL+ I+ + + +PV+++++E QI + + G YIVKP
Sbjct: 50 VTDWNMPGMQGIDLLRAIRADAKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 105
>gi|434400628|ref|YP_007134632.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
gi|428271725|gb|AFZ37666.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
Length = 573
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 12/116 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E +L VDD+ +R L+ R ++ +V +G + L+ + GE +LI
Sbjct: 174 EGKILVVDDNPTNRDLLSRQIKAQGYQVGTAANGQQVLELIQ-TGE----------YDLI 222
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M GY++LK +++S +R +PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 223 LLDIIMPEMDGYQVLKSLRDSQ-WRYIPVIMISALDQIDSVVKCIEMGAEDYLAKP 277
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+ R ++ LL+ S V +V G +A + ++ N FD +
Sbjct: 55 RSLRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIV----KEKNFNFD-----I 105
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
I+++ +P +G LL KI + + R +PV++MSS+D ++ + C+++GA +++VKPV+
Sbjct: 106 ILSEVEVPSFSGISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVR 164
>gi|416015877|ref|ZP_11563343.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. glycinea str. B076]
gi|416026459|ref|ZP_11569908.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. glycinea str. race 4]
gi|320324907|gb|EFW80979.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. glycinea str. B076]
gi|320329273|gb|EFW85270.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 645
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
KE +L V+D+ V+R +++ +L+ CKV G A+ +++ G AL
Sbjct: 515 KERSILLVEDNPVNRTVVQAMLRNLGCKVDVAVDGAEAVM-------KASAGNHAL---- 563
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
I+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 564 ILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLAKPFKH 623
Query: 212 SD 213
+D
Sbjct: 624 AD 625
>gi|115523213|ref|YP_780124.1| response regulator receiver protein [Rhodopseudomonas palustris
BisA53]
gi|115517160|gb|ABJ05144.1| response regulator receiver protein [Rhodopseudomonas palustris
BisA53]
Length = 121
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VLAVDDS R ++ L+ + +V E G RAL L + K +LIIT
Sbjct: 4 RVLAVDDSKTMRDMVTFTLKKAGFEVAEAEDGQRALAVL-----------NTAKFDLIIT 52
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M G L+K+++ +S R VP++I+++E + GA ++VKP
Sbjct: 53 DLNMPNMDGITLIKQVRAASSHRAVPILILTTETDGAKKADGKAAGATGWLVKP 106
>gi|410086811|ref|ZP_11283518.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
SC01]
gi|421493260|ref|ZP_15940617.1| hypothetical protein MU9_1787 [Morganella morganii subsp. morganii
KT]
gi|455738919|ref|YP_007505185.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
subsp. morganii KT]
gi|400192428|gb|EJO25567.1| hypothetical protein MU9_1787 [Morganella morganii subsp. morganii
KT]
gi|409766645|gb|EKN50735.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
SC01]
gi|455420482|gb|AGG30812.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Morganella morganii
subsp. morganii KT]
Length = 130
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K+L+ L VDD R+++ LL ++ K+ E G AL+ + A +
Sbjct: 2 AAKDLNFLVVDDFSTMRRIVRNLLKELGYNKIEEAEDGVDALEKI-----------RAGQ 50
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ ++ D+ MP M G ELLK I+ + +PV+++++E I + + GA Y+VKP
Sbjct: 51 IDFVVADWNMPNMDGLELLKTIRADDALKHIPVMMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL QSN+ +L
Sbjct: 36 KTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQSNI-------DL 86
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 87 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 146
>gi|429217799|ref|YP_007179443.1| CheY-like receiver domain-containing protein [Deinococcus
peraridilitoris DSM 19664]
gi|429128662|gb|AFZ65677.1| CheY-like receiver domain-containing protein [Deinococcus
peraridilitoris DSM 19664]
Length = 154
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKV-TAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L VDD+ D ++ + ++ + S AL+YL G S LI+
Sbjct: 7 ILLVDDNPADLEIAAQAFGLAGITLLDTAHSLEEALEYLQRRGRHSER--RTADPTLILL 64
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MPG +G +LL+ IK +F PVV++++ + I++C GA Y+VKP + SD
Sbjct: 65 DLNMPGGSGLDLLRHIKSDPLFSLTPVVMLTTSSASSDIEACYRHGANGYVVKPSRFSD 123
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+ R+++ LL+ +V AV G +A + + A +L
Sbjct: 36 RSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMR---------GRAYAFDL 86
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G +LL +I + + +PV++MSS+D + + C++ GA +++VKPV+
Sbjct: 87 VLTEVNMPTLSGIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVR 145
>gi|309790612|ref|ZP_07685166.1| PAS/PAC sensor hybrid histidine kinase [Oscillochloris trichoides
DG-6]
gi|308227340|gb|EFO81014.1| PAS/PAC sensor hybrid histidine kinase [Oscillochloris trichoides
DG6]
Length = 973
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A++ VA +++LHVL VDD R ++ RLLQ +VT V G AL + EQ+
Sbjct: 837 ALSVVA--TRQLHVLVVDDDRYVRPVLVRLLQRHGFRVTNVADGLTALTII----EQA-- 888
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDS-CLEEGA 201
+ ++++ D MPG+ G E+L++IKE+ + V+I+++ D+ + S L GA
Sbjct: 889 -----RPDVVLLDVKMPGIDGTEVLRRIKENPLTAMTRVIILTANDLGESLQSQVLRLGA 943
Query: 202 EEYIVKPV 209
+ Y+ KP+
Sbjct: 944 DGYLEKPI 951
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S KV AV G +A + L ++LI+
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHN---------IDLIL 90
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++G+ LL + E + + +PV++MSS + + C+ GA +++VKPV+ ++
Sbjct: 91 TEVELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNE 150
>gi|392548366|ref|ZP_10295503.1| chemotaxis protein [Pseudoalteromonas rubra ATCC 29570]
Length = 127
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQEFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADDKLKHIPVLMVTAEAKKEQIVAAAQAGVNGYIVKP 109
>gi|119774648|ref|YP_927388.1| response regulator receiver protein [Shewanella amazonensis SB2B]
gi|119767148|gb|ABL99718.1| response regulator receiver modulated diguanylate cyclase
[Shewanella amazonensis SB2B]
Length = 416
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 82 WAMATVAECSKELH--VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ 139
+ + +A ++ H VL DDS + RK + LL++ +V E+G RAL+ L
Sbjct: 108 YVVKLIATLARNRHTKVLVADDSALSRKFVRNLLELHLFEVIEAENGARALELL------ 161
Query: 140 SNVGFDALK-VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
DA+ + L+I DY MPG+ G+EL+ + +E E+ ++ +S++ T ++
Sbjct: 162 -----DAVSGIRLLIADYNMPGIDGFELILRAREKFSREEMAIIGLSNDTDETLTARFIK 216
Query: 199 EGAEEYIVKP 208
GA +++ KP
Sbjct: 217 NGANDFLQKP 226
>gi|159184597|ref|NP_354083.2| two component response regulator [Agrobacterium fabrum str. C58]
gi|159139899|gb|AAK86868.2| two component response regulator [Agrobacterium fabrum str. C58]
Length = 430
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+K VL VDD+ R + +L+ + KV+ SG RAL+ L D +
Sbjct: 121 NKRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILSQDP----------SIQ 170
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVV-IMSSEDVLTQIDSCLEEGAEEYIVKP 208
L+ITDY MP M GYEL ++I++S ++ V+ I SS D L S L+ GA +++ +P
Sbjct: 171 LVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSA-SFLKAGASDFVYRP 228
>gi|335036577|ref|ZP_08529902.1| two component response regulator [Agrobacterium sp. ATCC 31749]
gi|333791960|gb|EGL63332.1| two component response regulator [Agrobacterium sp. ATCC 31749]
Length = 430
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+K VL VDD+ R + +L+ + KV+ SG RAL+ L D +
Sbjct: 121 NKRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILSQDP----------SIQ 170
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVV-IMSSEDVLTQIDSCLEEGAEEYIVKP 208
L+ITDY MP M GYEL ++I++S ++ V+ I SS D L S L+ GA +++ +P
Sbjct: 171 LVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSA-SFLKAGASDFVYRP 228
>gi|291571978|dbj|BAI94250.1| adenylate cyclase [Arthrospira platensis NIES-39]
Length = 344
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
+ VDD+ ++R L+ R LQ V +G AL+ + + ++L++ D
Sbjct: 1 MIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM-----------RSTPLDLVLLDI 49
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M GY++L+ +K R +PV+++S+ + + I C+E GAE+Y+ KP
Sbjct: 50 MMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 101
>gi|365901261|ref|ZP_09439112.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3843]
gi|365418028|emb|CCE11654.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3843]
Length = 503
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + V++G + L G +AL ++ ++ D
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAIVVDTGDAVIDKL--------TGPNALAIDALVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L K++E+ + +PV++ ++ + + S + GA +++VKPV L
Sbjct: 57 LVMPGLDGMGVLAKMREAGL--SIPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGL 110
>gi|339488643|ref|YP_004703171.1| response regulator receiver protein [Pseudomonas putida S16]
gi|338839486|gb|AEJ14291.1| response regulator receiver protein [Pseudomonas putida S16]
Length = 128
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K++ +L VDD R++I+ LL+ + + GT AL L E + F
Sbjct: 1 MNKDMKILIVDDFSTMRRIIKNLLRDLGFTNTEEADDGTTALPML----ENGHYDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM+G +LL+K++ S + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMSGIDLLRKVRASDKLKSMPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 120 VTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREV 179
V + ++G +A YL G ++L++T+ MPG++G LL +I ++F+ +
Sbjct: 37 VISAKNGQQAWAYLEDKGNN---------IDLVLTEVFMPGVSGISLLSRIMRHNIFKNI 87
Query: 180 PVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
PV++MSS D ++ + CL +GA +++VKP++
Sbjct: 88 PVIMMSSSDDMSTVFKCLSKGAVDFLVKPIR 118
>gi|402700521|ref|ZP_10848500.1| protein CheY [Pseudomonas fragi A22]
Length = 127
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + + GT AL L Q ++ F
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTALPIL----NQGHIDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG ELL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMTGIELLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 109
>gi|389579963|ref|ZP_10169990.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
gi|389401598|gb|EIM63820.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
Length = 141
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS R +++R L A G+R L+ +G+++ V+LI+TD
Sbjct: 5 ILIVDDSMPMRTVLKRSL------AAAGYGGSRILE--ASNGKEALTVLKGEWVDLIMTD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
Y MP M G LK +K ++F+E+PV+++S+E ++I ++ GA YI KP
Sbjct: 57 YNMPEMNGLSFLKTVKTEALFKEIPVIVISTEGNDSKIKEFIDTGAAGYITKP 109
>gi|339498727|ref|YP_004696762.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
gi|338833076|gb|AEJ18254.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
Length = 242
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S+ H+L V+DSYV ++++L+ + + E G AL+ L FD
Sbjct: 4 SQHKHILIVEDSYVQAAGLQKILEQAGYSIVRAEHGLEALELL------QKEHFD----- 52
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
L+I+D MP M GY L K IK + +++ +PV++++S I +E GA+ +I KP K
Sbjct: 53 LVISDVMMPKMDGYTLCKTIKTNELYKHLPVILVTSLSEPADIIRGIESGADSFIPKPYK 112
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 18/119 (15%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S +HVL VDD+ LL+ +VT SG A+ L E+ + N
Sbjct: 7 SSTVHVLLVDDA--------GLLRRCQYQVTTASSGREAMALL----ERGT------QFN 48
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
L++TD MP + G LL ++ + ++ E+PVV+MSS + + +C+ GAE+YI+KPV
Sbjct: 49 LLLTDVMMPDVDGPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPV 107
>gi|392966992|ref|ZP_10332410.1| response regulator receiver protein [Fibrisoma limi BUZ 3]
gi|387843789|emb|CCH54458.1| response regulator receiver protein [Fibrisoma limi BUZ 3]
Length = 154
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQ--ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K +H+L DD DR L K++ VE G +++L G +N + +
Sbjct: 7 AKPIHILLADDDEDDRYLTREAFHQHFPVSKMSFVEDGEELMEFLCFTGRYANASHNLPE 66
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
LI+ D MP G E L++IK S R +PVV++++ D I++ GA +I KP
Sbjct: 67 --LILLDLNMPRKDGREALREIKASDQLRHIPVVVLTTSDAKDDIETSYYNGANSFITKP 124
>gi|334136361|ref|ZP_08509829.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333606089|gb|EGL17435.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1054
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD ++ +++E +L +VT V SG AL L D + +L+I+
Sbjct: 718 HLLIVDDDPINLQVLETILPPEEYEVTLVTSGKEALAVL-----------DTKEWDLVIS 766
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M+GYEL + I++ E+P++++++ I S GA +Y+ KPV+
Sbjct: 767 DIMMPQMSGYELTRIIRKRFTLTELPILLLTARSQPKDIQSGFLAGANDYVTKPVE 822
>gi|118351766|ref|XP_001009158.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila]
gi|89290925|gb|EAR88913.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila SB210]
Length = 135
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 12/121 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+HVL +D R + +LQ+ + +VTAVE+G A L L +Q K+++++
Sbjct: 3 IHVLFAEDDNFQRLAVTHILQLCNYQVTAVENGRIARDIL-LKQDQ--------KIDIVL 53
Query: 154 TDYTMPGMTGYELLKKIKE-SSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
D MP M ELL ++E S +++PVVI+S D+ +I + LE GA+++I+KP+K+
Sbjct: 54 LDIRMPEMDALELLSFMQEHSENLQKIPVVIISLNDL--EIQTFLERGAKDFIIKPMKIQ 111
Query: 213 D 213
+
Sbjct: 112 N 112
>gi|398814805|ref|ZP_10573483.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
gi|398035893|gb|EJL29119.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
Length = 1042
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD V+ +++E +L +VT V SG AL L D + +L+I+D
Sbjct: 703 LLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAIL-----------DTKEWDLVISD 751
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M+GYEL + I+E E+PV+++++ I S GA +Y+ KPV+
Sbjct: 752 IMMPQMSGYELTRMIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVE 806
>gi|86608608|ref|YP_477370.1| response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557150|gb|ABD02107.1| response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 339
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 78 GFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDG 137
G P A A+ ++ H+L VDD R L+ LLQ +V+ ESG +ALQ L
Sbjct: 6 GIPVTPSADEADETEIGHLLIVDDQPNSRLLLGDLLQSIGYRVSEAESGNQALQML---- 61
Query: 138 EQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCL 197
+ +LI+ D MPG+ G+E+ ++IK + R +PVV++++ +
Sbjct: 62 -------KTFQPDLILLDVMMPGLDGFEVCRRIKANDETRLIPVVLVTAASDHKNRVRGI 114
Query: 198 EEGAEEYIVKPVKLSD 213
E GA++++ KP S+
Sbjct: 115 EAGADDFLSKPFDESE 130
>gi|325294249|ref|YP_004280763.1| response regulator receiver protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064697|gb|ADY72704.1| response regulator receiver protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 133
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
+A + +++L VDD RK+++ LL Q+ V E G +AL+ L +
Sbjct: 1 MAMPDQNINILTVDDMAAMRKILKTLLAQLGYKNVDEAEDGKQALEILKKNPN------- 53
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
K L+ITD+ MP MTG EL+++I++ + +P++++++E + ++ G YI
Sbjct: 54 --KYGLVITDWNMPNMTGIELVQEIRKDPELKNIPILMVTAEAKKENVLMAIKAGVNNYI 111
Query: 206 VKP 208
VKP
Sbjct: 112 VKP 114
>gi|288960047|ref|YP_003450387.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
gi|288912355|dbj|BAI73843.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
Length = 748
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L + +L+ +VT G AL+ L + ++V LII+
Sbjct: 630 HILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERLS----------EGMEVELIIS 679
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
D MP M G+ LL+ +K E+PVV+++S + L GA+ YIVK
Sbjct: 680 DVEMPRMDGFALLQAVKADRRLAEIPVVLVTSRASDEDRERGLRLGADAYIVK 732
>gi|146338287|ref|YP_001203335.1| response regulator in two-component regulatory system, sigma
54-dependent [Bradyrhizobium sp. ORS 278]
gi|146191093|emb|CAL75098.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 278]
Length = 498
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + VE+G ++ L DA ++ I+ D
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL--------TNPDAGPIDAIVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L K++E+ + +PV++ ++ + + S + GA++++VKPV +
Sbjct: 57 LVMPGLDGMGVLSKMREAGI--SIPVIVQTAHGGIDNVVSAMRAGAQDFVVKPVGI 110
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V++ R ++ LL+ S +VTAV +G +A + L + +N +++
Sbjct: 93 RSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILE---DLTN------HIDI 143
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI F+ +PV++MSS D + + CL +GA +++VKP++
Sbjct: 144 VLTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIR 202
>gi|373487543|ref|ZP_09578210.1| ATP-binding region ATPase domain protein [Holophaga foetida DSM
6591]
gi|372008618|gb|EHP09243.1| ATP-binding region ATPase domain protein [Holophaga foetida DSM
6591]
Length = 381
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 13/120 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG-FDALKV 149
S E H+L VDD +R+ + RLL+ G A+Q ++N G FD
Sbjct: 2 SLEGHILIVDDLETNREALARLLEREGLSSETACEGNEAVQ-------KANSGLFDT--- 51
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I+ D MPGM G E L +K+ R++PV+++S+ D + C+E GA++Y+ KP+
Sbjct: 52 --ILLDVMMPGMDGIETLGVLKQDPGTRDIPVLMVSALDQGQAVRHCIEMGADDYLTKPI 109
>gi|160899194|ref|YP_001564776.1| response regulator receiver modulated CheW protein [Delftia
acidovorans SPH-1]
gi|333914688|ref|YP_004488420.1| response regulator receiver modulated CheW protein [Delftia sp.
Cs1-4]
gi|160364778|gb|ABX36391.1| response regulator receiver modulated CheW protein [Delftia
acidovorans SPH-1]
gi|333744888|gb|AEF90065.1| response regulator receiver modulated CheW protein [Delftia sp.
Cs1-4]
Length = 323
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL--DGEQSNVGFDALKVNLII 153
VLA DDS+V R LIE+ L++ ++SG A L D Q+ A KV L++
Sbjct: 194 VLAADDSFVARSLIEKELKVLQAPYEMLKSGKEAWDRLNAIADSAQAEGLTVADKVALVL 253
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
TD MP M G+ L + IK+ + F +PV+I SS D GA+ Y+ K
Sbjct: 254 TDLEMPEMDGFTLTRHIKQDARFHSIPVLIHSSLSGSANEDHVRSVGADGYVAK 307
>gi|297569472|ref|YP_003690816.1| response regulator receiver protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296925387|gb|ADH86197.1| response regulator receiver protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 152
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQI--SSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K VL V+D D L++ L+ + C++ V+ G AL +L GE A +
Sbjct: 7 AKYFDVLLVEDEPADAHLVQLGLEENEAPCRLHHVKDGLVALDFLRRQGESFA---SAPR 63
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LI+ D MP M G ELL ++K +PVVI+++ D +++ + GA YIVKP
Sbjct: 64 PHLILLDLNMPRMNGRELLAELKADPGLAAIPVVILTTSDSPQDVEASFQAGAAGYIVKP 123
Query: 209 VKLSD 213
+ +
Sbjct: 124 AGMEE 128
>gi|443327316|ref|ZP_21055944.1| serine phosphatase RsbU, regulator of sigma subunit [Xenococcus sp.
PCC 7305]
gi|442793108|gb|ELS02567.1| serine phosphatase RsbU, regulator of sigma subunit [Xenococcus sp.
PCC 7305]
Length = 592
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ + L+ R + KV +G +AL + ++ K +LI+ D
Sbjct: 196 ILIVDDNATNLDLLSRYIINQGYKVARAANGKQALAMIQIE-----------KYDLILLD 244
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPG+ GYE+L+ IK SS +PV+++S+ D + + C+E GAE+Y+ KP
Sbjct: 245 VLMPGIDGYEVLQWIKNSS-LSYIPVIMISALDEIDSVVKCIEMGAEDYLSKP 296
>gi|402813381|ref|ZP_10862976.1| Two-component hybrid sensor and regulator [Paenibacillus alvei DSM
29]
gi|402509324|gb|EJW19844.1| Two-component hybrid sensor and regulator [Paenibacillus alvei DSM
29]
Length = 1018
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD V+ K++ +L +V SG AL L D + +LII+D
Sbjct: 695 ILIVDDDRVNLKILGDILSADQYEVVRAASGKEALSKL-----------DTAQWDLIISD 743
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP M+GYEL + I+E E+P++I+++ I S GA +Y+ KPV
Sbjct: 744 VMMPHMSGYELTRLIRERFSILELPILILTARSNAEDIHSGFMAGANDYVTKPV 797
>gi|78355431|ref|YP_386880.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78217836|gb|ABB37185.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 126
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ VL VDD R++I+ +L Q+ V + GT A L D K++ I
Sbjct: 7 MRVLVVDDFSTMRRIIKNILRQLGFNNVVEADDGTTAWDVLNKD-----------KIDFI 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+D+ MP MTG +LL+K++ S F ++P +++++E I ++ YIVKP
Sbjct: 56 ISDWNMPQMTGIDLLRKVRSSEEFADLPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|386393891|ref|ZP_10078672.1| signal transduction histidine kinase [Desulfovibrio sp. U5L]
gi|385734769|gb|EIG54967.1| signal transduction histidine kinase [Desulfovibrio sp. U5L]
Length = 1255
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD + + ++L +V + G +AL+ L D V+ ++ D
Sbjct: 1136 VLVVDDDMRNLFALSKVLTEKGLRVLKADDGAKALEILR----------DEPDVDAVLMD 1185
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ GYE L++I+E S F ++P++ ++++ + CL GA +Y+ KPV +
Sbjct: 1186 IMMPGLDGYEALRRIREESRFADLPLIALTAKAMKEDRGKCLAAGANDYLAKPVDV 1241
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L V+D R+ I RL+ VT SG +AL L + FD + ++L ++D
Sbjct: 990 LLLVEDDPDLRRGIRRLVADLDVNVTEAGSGAKALDAL------AGRSFDCMILDLGLSD 1043
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
M G+ELL+++++ PV++ + D+ + + L A+ I+K
Sbjct: 1044 -----MCGFELLQRLEKDREVPVPPVIVYTGRDLTREEEMELYRHADSIIIK 1090
>gi|374701829|ref|ZP_09708699.1| response regulator receiver protein [Pseudomonas sp. S9]
Length = 128
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ TA + GT AL L QS FD
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPML-----QSG-SFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG ELL+ ++ +++PV+++++E QI + G Y+VKP
Sbjct: 52 --FLVTDWNMPGMTGIELLRAVRADERLKQLPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|374604084|ref|ZP_09677054.1| sensor protein [Paenibacillus dendritiformis C454]
gi|374390348|gb|EHQ61700.1| sensor protein [Paenibacillus dendritiformis C454]
Length = 1023
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
+A + + +LAVDD V+ ++ LL VT SG A + +
Sbjct: 689 IAAAADNIKILAVDDDPVNLNILTNLLIAEGYSVTTAVSGREAAVLVAKE---------- 738
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
+ +L+I D P M+GYEL + I+E E+P++++++ IDS GA +Y+
Sbjct: 739 -RWDLVIADVMTPHMSGYELTRAIRERFSMSELPILLLTARSRAEDIDSGFRAGANDYVT 797
Query: 207 KPV 209
KPV
Sbjct: 798 KPV 800
>gi|428209663|ref|YP_007094016.1| response regulator receiver protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428011584|gb|AFY90147.1| response regulator receiver protein [Chroococcidiopsis thermalis
PCC 7203]
Length = 121
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL V+DS DR+LI LLQ V V+S AL +L + + +LI+ D
Sbjct: 4 VLVVEDSPTDRRLIVALLQQVGLNVVCVDSAESALHWLSANH----------RPDLIVLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPG++G +L ++++ S F ++ ++ SS+D L +G + YI KP
Sbjct: 54 IVMPGISGLDLCRQLRASPTFEDISIIFCSSKDQEFDRFWALRQGGDAYIAKP 106
>gi|399008940|ref|ZP_10711391.1| signal transduction histidine kinase [Pseudomonas sp. GM17]
gi|398114451|gb|EJM04272.1| signal transduction histidine kinase [Pseudomonas sp. GM17]
Length = 1070
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 13/118 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +D+ +++ +I+ L+ C VTA +G ALQ Q V FD L++
Sbjct: 839 LHILVAEDNAINQAIIKEQLEALGCTVTAASNGEEALQLW-----QPQV-FD-----LVL 887
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
TD MP + GYEL + ++E RE P+V +++ + + C+ G ++VKP+ L
Sbjct: 888 TDVNMPLLNGYELTRALRERD--RETPIVGVTANAMREEGARCMAVGMNAWLVKPLSL 943
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R+++ LL+ +V E+G A Q L + Q+++ +L
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL--EDLQNHI-------DL 129
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP++
Sbjct: 130 VLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
>gi|77359759|ref|YP_339334.1| chemotaxis protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874670|emb|CAI85891.1| chemotaxis protein cheY [Pseudoalteromonas haloplanktis TAC125]
Length = 127
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNIKILVVDDFSTMRRIIKNLLRDLGFTNVLEADDGSTALPML------QNQSFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADDKLKHLPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 109
>gi|392540531|ref|ZP_10287668.1| chemotaxis protein [Pseudoalteromonas piscicida JCM 20779]
gi|409201740|ref|ZP_11229943.1| chemotaxis protein [Pseudoalteromonas flavipulchra JG1]
Length = 127
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQEFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADEKLKHIPVLMVTAEAKKEQIVAAAQAGVNGYIVKP 109
>gi|86607341|ref|YP_476104.1| response regulator [Synechococcus sp. JA-3-3Ab]
gi|86555883|gb|ABD00841.1| response regulator [Synechococcus sp. JA-3-3Ab]
Length = 380
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
K H+L +DDS +K +E +LQ +VT + + +AL + L L
Sbjct: 249 SDKPAHILCIDDSMAIQKTVEFILQNEGYQVTTIGNPLKALGQVFL-----------LNP 297
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++I+ D MP + GYEL +++SS FRE P+++++ +D T GA E++ KP
Sbjct: 298 DMILCDVAMPKLDGYELCAMLRKSSQFRETPMIMLTGKDGFTDRLKARMAGANEFLSKP 356
>gi|385811128|ref|YP_005847524.1| response regulator [Ignavibacterium album JCM 16511]
gi|383803176|gb|AFH50256.1| Response regulator [Ignavibacterium album JCM 16511]
Length = 116
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 97 LAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDY 156
+ DDS + RKLI L + ++ +V G AL+ L + ++L+ITD
Sbjct: 1 MVADDSPIIRKLITFSLSVKGYEIISVSDGMEALEMLPRE-----------NIDLLITDL 49
Query: 157 TMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + G+EL+K I+E+ + P++++S+ I+ L GA+ Y++KP
Sbjct: 50 NMPNVDGFELIKAIRENDDLKNTPIIVLSNLSETGDIERALHYGADSYLIKP 101
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL QSN+ +L
Sbjct: 36 KTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQSNI-------DL 86
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 87 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 146
>gi|359451448|ref|ZP_09240849.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. BSi20480]
gi|392534181|ref|ZP_10281318.1| chemotaxis protein [Pseudoalteromonas arctica A 37-1-2]
gi|392536999|ref|ZP_10284136.1| chemotaxis protein [Pseudoalteromonas marina mano4]
gi|358042667|dbj|GAA77098.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. BSi20480]
Length = 127
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQVFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADDKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 109
>gi|347732938|ref|ZP_08866007.1| response regulator [Desulfovibrio sp. A2]
gi|347518309|gb|EGY25485.1| response regulator [Desulfovibrio sp. A2]
Length = 120
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ VL VDD R++I+ +L Q+ V + GT A + L D +++ +
Sbjct: 1 MRVLVVDDFSTMRRIIKNILRQLGFTNVVEADDGTTAWEVLNKD-----------RIDFV 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+D+ MP MTG ELL+K++ S F ++P +++++E + ++ YIVKP
Sbjct: 50 ISDWNMPKMTGIELLRKVRASEEFADMPFLMVTAEAQQENVIEAVQARVSNYIVKP 105
>gi|384215988|ref|YP_005607154.1| two-component response regulator [Bradyrhizobium japonicum USDA 6]
gi|354954887|dbj|BAL07566.1| two-component response regulator [Bradyrhizobium japonicum USDA 6]
Length = 493
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 100 DDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMP 159
DD V R+L+E ++Q + V+SG A+ L DA ++ +I D MP
Sbjct: 4 DDDAVARRLVENMVQKCGYETVVVDSGDAAIAAL--------TAPDAPAIDAVILDLVMP 55
Query: 160 GMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
G+ G +L KI+E+ + VP+++ ++ + + S + GA +++VKPV L
Sbjct: 56 GLDGMGVLAKIREAGL--GVPIIVQTAHGGIDNVISAMRAGAADFVVKPVGL 105
>gi|367474914|ref|ZP_09474404.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 285]
gi|365272791|emb|CCD86872.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 285]
Length = 498
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q + VE+G ++ L DA ++ I+ D
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL--------TNPDAGPIDAIVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L K++E+ + +PV++ ++ + + S + GA++++VKPV +
Sbjct: 57 LVMPGLDGMGVLSKMREAGI--SIPVIVQTAHGGIDNVVSAMRAGAQDFVVKPVGI 110
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R+++ LL+ +V E+G A +YL + Q+N+ +L
Sbjct: 80 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL--EDLQNNI-------DL 130
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M ++G LL KI + +++PV++MS+ D ++ + CL +GA +++VKP++
Sbjct: 131 VLTEVFMTCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLR 189
>gi|432372553|ref|ZP_19615598.1| chemotaxis protein CheY [Escherichia coli KTE11]
gi|430897046|gb|ELC19273.1| chemotaxis protein CheY [Escherichia coli KTE11]
Length = 129
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGADALNKL----QAGGYGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ S +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|375096896|ref|ZP_09743161.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Saccharomonospora marina XMU15]
gi|374657629|gb|EHR52462.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Saccharomonospora marina XMU15]
Length = 125
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+ LQ+S +V V G AL + + + +L++ D
Sbjct: 4 ILVVDDDADIRDLVAFKLQMSGYEVDTVGDGPAALSAIADN-----------QPDLVVLD 52
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM+GY++ ++++E R +P++++++ +DS GA++Y+VKP
Sbjct: 53 VMMPGMSGYDVCRRLREEPATRHLPIIMLTARAQDRDVDSGFSSGADDYVVKP 105
>gi|291276453|ref|YP_003516225.1| chemotaxis regulatory protein [Helicobacter mustelae 12198]
gi|290963647|emb|CBG39479.1| chemotaxis regulatory protein [Helicobacter mustelae 12198]
Length = 124
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ LQ + + E G A L D K++++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLQRLGYEDILEAEHGVEAWDILNGDS----------KIDVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK + + + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKTRADARYEDIPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>gi|414168677|ref|ZP_11424640.1| hypothetical protein HMPREF9696_02495 [Afipia clevelandensis ATCC
49720]
gi|410887413|gb|EKS35223.1| hypothetical protein HMPREF9696_02495 [Afipia clevelandensis ATCC
49720]
Length = 504
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q V+SG AL +L + D V+ ++ D
Sbjct: 5 ILIADDDAVQRRLVENMVQRCGYAAVTVDSGDAALAHL--------IDPDTAPVDALVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI++ + ++PV++ ++ + + S + GA +++VKPV +
Sbjct: 57 LVMPGLDGMGVLAKIRDLGL--DLPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGI 110
>gi|425899728|ref|ZP_18876319.1| sensor histidine kinase/response regulator [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397890825|gb|EJL07307.1| sensor histidine kinase/response regulator [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 1070
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 13/118 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +D+ +++ +I+ L+ C VTA +G ALQ Q V FD L++
Sbjct: 839 LHILVAEDNAINQAIIKEQLEALGCTVTAASNGEEALQLW-----QPQV-FD-----LVL 887
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
TD MP + GYEL + ++E RE P+V +++ + + C+ G ++VKP+ L
Sbjct: 888 TDVNMPLLNGYELTRALRERD--RETPIVGVTANAMREEGARCMAVGMNAWLVKPLSL 943
>gi|334131795|ref|ZP_08505557.1| Chemotaxis protein CheY [Methyloversatilis universalis FAM5]
gi|333443268|gb|EGK71233.1| Chemotaxis protein CheY [Methyloversatilis universalis FAM5]
Length = 132
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++ L VDD R+++ LL ++ V E G ALQ L A + +
Sbjct: 5 KMKFLVVDDFSTMRRIVRNLLKELGFTNVDEAEDGVIALQKL-----------KAAEFDF 53
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MP MTG ELL+ I+ + + +PV+++++E I + GA YIVKP
Sbjct: 54 VVTDWNMPNMTGIELLRAIRADAALKSLPVLMITAEAKKENIIEAAQAGASGYIVKP 110
>gi|427710591|ref|YP_007052968.1| response regulator receiver protein [Nostoc sp. PCC 7107]
gi|427363096|gb|AFY45818.1| response regulator receiver protein [Nostoc sp. PCC 7107]
Length = 157
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVE--SGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L V+DS D + + RLLQ S ++ +G +AL +L G S+ +L LI+
Sbjct: 15 LLIVEDSNEDFEALHRLLQRSPIAISIQRCVNGEQALAFLYRTGNYSDREI-SLMPGLIV 73
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D +PG G E+L++IK+ + VPVV+ ++ + I+ C G YIVKP+
Sbjct: 74 LDLNLPGTDGREVLRQIKQDDHLKTVPVVVFTTSNNPKDIEDCYRYGVNSYIVKPINF 131
>gi|86609395|ref|YP_478157.1| response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557937|gb|ABD02894.1| response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 380
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K H+L +DDS +K +E +LQ +VT + + +AL + L L ++
Sbjct: 251 KPSHILCIDDSMAIQKTVEFILQNEGYQVTTIGNPLKALGQVFL-----------LNPDM 299
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+ D MP + GYEL +++SS FRE P+++++ +D T GA E++ KP
Sbjct: 300 ILCDVAMPKLDGYELCAMLRKSSQFRETPMIMLTGKDGFTDRIKARMAGANEFLSKP 356
>gi|238763419|ref|ZP_04624382.1| Histidine kinase [Yersinia kristensenii ATCC 33638]
gi|238763500|ref|ZP_04624462.1| Histidine kinase [Yersinia kristensenii ATCC 33638]
gi|238698282|gb|EEP91037.1| Histidine kinase [Yersinia kristensenii ATCC 33638]
gi|238698363|gb|EEP91117.1| Histidine kinase [Yersinia kristensenii ATCC 33638]
Length = 1189
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 92 KELHVLAVDDSYVDRKLIER-LLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
K L +L VDD +R+L+++ L+ I +V + ++G A Q L FDA
Sbjct: 900 KNLRILVVDDLPANRQLLQQQLVFIGIEQVMSAKNGAEAWQIL------QQYSFDA---- 949
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+ITDY MP M GYEL I+ S+ +++ ++ +++ C+E G +YIVKPV
Sbjct: 950 -VITDYNMPLMNGYELAAHIRNSATMKDMVIIGCTADAREESTTLCIEAGMNDYIVKPVA 1008
Query: 211 L 211
+
Sbjct: 1009 I 1009
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V++ R ++ LL+ S +VTAV +G +A + L + +N +++
Sbjct: 93 RSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILE---DLTN------HIDI 143
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI F+ +PV++MSS D + + CL +GA +++VKP++
Sbjct: 144 VLTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIR 202
>gi|239907028|ref|YP_002953769.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|410463899|ref|ZP_11317382.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|239796894|dbj|BAH75883.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|409982971|gb|EKO39377.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 127
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+KE+ +L VDD R++I+ +L Q+ + + G+ A + L D K
Sbjct: 3 ANKEMRILVVDDFSTMRRIIKNILRQLGFNNILEADDGSTAWETLNKD-----------K 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ II+D+ MP M G ELL+K++ S F +P +++++E I ++ YIVKP
Sbjct: 52 IDFIISDWNMPKMPGIELLRKVRGSEEFANLPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|157145330|ref|YP_001452649.1| chemotaxis regulatory protein CheY [Citrobacter koseri ATCC
BAA-895]
gi|157082535|gb|ABV12213.1| hypothetical protein CKO_01070 [Citrobacter koseri ATCC BAA-895]
Length = 129
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L Q++ GFD
Sbjct: 2 ADKELRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL-----QAS-GFD--- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 53 --FVISDWNMPNMDGLELLKTIRADGAMASLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|375266660|ref|YP_005024103.1| hybrid sensory histidine kinase BarA [Vibrio sp. EJY3]
gi|369841980|gb|AEX23124.1| hybrid sensory histidine kinase BarA [Vibrio sp. EJY3]
Length = 932
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 40 GAPTQRFPFAYSLTQTHNI--LTK--THQRLVKEKKFKETNRGFPFWA-MATVAECSKEL 94
G P+ A + + H I LTK + +RL++ + P A + TV E L
Sbjct: 609 GTPSTELALADQIMKEHQIQCLTKPLSRRRLLQSLISEHVESPQPLKAPIKTVEEERLPL 668
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVLAVDD+ + KLI LL+ VTA +G +A+ N+ + K ++I
Sbjct: 669 HVLAVDDNPANLKLISALLKERVETVTACSNGQQAV----------NLATEK-KYDMIFM 717
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G K IK+ + ++ PV+ +++ + + D L G ++Y+ KP++
Sbjct: 718 DIQMPHMDGVTACKHIKQIELNKDTPVIAVTAHAMAGERDRLLAAGMDDYLTKPIE 773
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 10/118 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++H+L VDD V R L+ +L+ + VT V +G A L L+G+ V +D L+
Sbjct: 167 KVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTL-LNGK---VMYD-----LV 217
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV-LTQIDSCLEEGAEEYIVKPV 209
+TD MP +TG++LL++I E + +PV++MS V + ++ G ++++ KP+
Sbjct: 218 LTDVMMPMVTGFDLLQRINEHIEIKHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 275
>gi|109947708|ref|YP_664936.1| CheY response regulator [Helicobacter acinonychis str. Sheeba]
gi|109714929|emb|CAJ99937.1| CheY response regulator [Helicobacter acinonychis str. Sheeba]
Length = 124
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ + E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDILEAEHGIEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRADSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>gi|333907213|ref|YP_004480799.1| response regulator receiver protein [Marinomonas posidonica
IVIA-Po-181]
gi|333477219|gb|AEF53880.1| response regulator receiver protein [Marinomonas posidonica
IVIA-Po-181]
Length = 126
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ + + GT AL L A ++ +
Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTALPIL-----------QAGTIDFL 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGMTG ELL+ ++ + +PV+++++E QI S + G Y+VKP
Sbjct: 50 VTDWNMPGMTGIELLRAVRADEKLKSIPVLMVTAEAKRDQIISAAQAGVNGYVVKP 105
>gi|373487927|ref|ZP_09578593.1| response regulator receiver [Holophaga foetida DSM 6591]
gi|372007701|gb|EHP08330.1| response regulator receiver [Holophaga foetida DSM 6591]
Length = 138
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A+ T + +L V+DS L L++ +V +G AL+ LG +
Sbjct: 2 AIGTGKNWPEGTKILVVEDSAPTAHLFSARLKMEGIEVLTARNGLEALEILGQE------ 55
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKE-SSVFREVPVVIMSSEDVLTQIDSCLEEGA 201
++L++TD MPGM GY L+ +I++ + +P++++SS ++ C E GA
Sbjct: 56 -----PISLVVTDLMMPGMDGYRLVHEIRQLAPPLASIPIIVVSSNQRESEQVRCFEAGA 110
Query: 202 EEYIVKPVKL 211
+EY+ KPV L
Sbjct: 111 DEYMTKPVSL 120
>gi|354567654|ref|ZP_08986822.1| response regulator receiver protein [Fischerella sp. JSC-11]
gi|353542112|gb|EHC11576.1| response regulator receiver protein [Fischerella sp. JSC-11]
Length = 147
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCK--VTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L V+DS D ++++RL++ + + + SG L YL +G+ + + + ++I+
Sbjct: 9 LLVVEDSNEDFRMLQRLMRRMAVQNPIHRCTSGDEVLDYLYQEGKNPD---GSSRPSVIL 65
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D +PG+ G ++L+++K+ F+E+P+VI ++ I+ C ++GA Y+VKP+ + +
Sbjct: 66 LDLNLPGIDGRDILEQLKQDQSFKEIPIVIFTTSSNPKDIEFCYQKGANGYLVKPMDVQE 125
>gi|254477960|ref|ZP_05091345.1| sensor histidine kinase/response regulator [Ruegeria sp. R11]
gi|214028545|gb|EEB69381.1| sensor histidine kinase/response regulator [Ruegeria sp. R11]
Length = 760
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 87 VAECSKE-LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
V E S E L+VL VDD ++R ++ L AV SG AL+ L LD FD
Sbjct: 475 VDEVSLEGLNVLVVDDLELNRIILNERLDTWGVNTVAVASGDAALETL-LDARHEGRSFD 533
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE--GAEE 203
+I+ D+ MPGM G+EL ++I++ + ++P+VI+SS V ID E G E
Sbjct: 534 -----IILQDFQMPGMDGHELARRIRDIPEYVDLPIVILSS--VENTIDQYTRERLGRCE 586
Query: 204 YIVKPVKLS 212
+KPV+ S
Sbjct: 587 VALKPVRAS 595
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
A +L +L +D+ ++ ++ R+L+ + +V +G A+ F A
Sbjct: 624 APAQPQLKLLLAEDNKTNQLVVTRMLKSAPIEVIVASNGEDAVDL-----------FKAH 672
Query: 148 KVNLIITDYTMPGMTGYEL---LKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
+ ++++ D MP G E ++ ++ S + PVV +++ + + + CL G +++
Sbjct: 673 RPDIVLMDMMMPQKDGIEATGDIRALEASRNWPRCPVVALTANALQSHKEQCLAAGMDDF 732
Query: 205 IVKPVK 210
+ KP+K
Sbjct: 733 LSKPIK 738
>gi|270296590|ref|ZP_06202789.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|423307079|ref|ZP_17285078.1| hypothetical protein HMPREF1072_04018 [Bacteroides uniformis
CL03T00C23]
gi|423308338|ref|ZP_17286328.1| hypothetical protein HMPREF1073_01078 [Bacteroides uniformis
CL03T12C37]
gi|270272577|gb|EFA18440.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|392676972|gb|EIY70392.1| hypothetical protein HMPREF1072_04018 [Bacteroides uniformis
CL03T00C23]
gi|392687574|gb|EIY80866.1| hypothetical protein HMPREF1073_01078 [Bacteroides uniformis
CL03T12C37]
Length = 119
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L VDD K++ L ++ E RA+++L E + LII+
Sbjct: 3 QILFVDDKPAIGKVLSVYLG-KENELVYFEDPVRAIEWLNEGNEPA----------LIIS 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP MTG E L +K +S+F+++PVV++SSE+ T+ + LE GAE++I+KP
Sbjct: 52 DIRMPKMTGSEFLAYLKGNSLFKDIPVVMLSSEESTTERINLLEAGAEDFILKP 105
>gi|392308986|ref|ZP_10271520.1| two-component response regulator [Pseudoalteromonas citrea NCIMB
1889]
Length = 300
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 20/121 (16%)
Query: 92 KELHVLAVDDSYVDRKLIERLL----QISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
K +L VDD ++R +++ L QIS C ES +AL +L +
Sbjct: 3 KTARILIVDDDPLNRVVLDNTLSEEYQISQC-----ESAEQALTFLADN----------- 46
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
KV+LII+D MPGM+GY+LL+++K +PV+I+S+ + L+ GA +YI K
Sbjct: 47 KVDLIISDIRMPGMSGYDLLERLKAKQHTYAIPVIIISASNSYNDEAKGLQMGAMDYITK 106
Query: 208 P 208
P
Sbjct: 107 P 107
>gi|358455253|ref|ZP_09165481.1| transcriptional regulator, SARP family [Frankia sp. CN3]
gi|357081506|gb|EHI90937.1| transcriptional regulator, SARP family [Frankia sp. CN3]
Length = 459
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
VL VDD+ ++R+L+ + +V E+G RAL+ L + GFD +++
Sbjct: 302 RVLVVDDTAINRRLLASAVAQLGHEVETAENGHRALEMLRAADDDPR-GFD-----IVLL 355
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP + GY L +IK V +VPV+++S+ L + C+E GA +Y+ KP
Sbjct: 356 DLLMPVLDGYATLAEIKADPVLADVPVIMVSAVPELESVVRCIELGAIDYLPKP 409
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK--V 149
K L VL V++ R+++ LL+ +V E+G A Q L + L+ +
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----------EDLQNHI 127
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP+
Sbjct: 128 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 187
Query: 210 K 210
+
Sbjct: 188 R 188
>gi|300868141|ref|ZP_07112775.1| putative Sensor protein [Oscillatoria sp. PCC 6506]
gi|300333876|emb|CBN57955.1| putative Sensor protein [Oscillatoria sp. PCC 6506]
Length = 1055
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD + +R +I LL+ V +G GLD + L ++IITD
Sbjct: 841 ILIVDDRWENRSVIVNLLKPIGFIVAEAANGLE-----GLDRVRE------LSPDVIITD 889
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP M G++L+++++ES FRE+ V++ S+ T + L+ GA+ ++ KPV++SD
Sbjct: 890 LVMPKMDGFQLVRRLRESPEFREIVVIVSSASVFETDQYNSLDAGADAFLPKPVQISD 947
>gi|114563977|ref|YP_751491.1| multi-sensor hybrid histidine kinase [Shewanella frigidimarina NCIMB
400]
gi|114335270|gb|ABI72652.1| multi-sensor hybrid histidine kinase [Shewanella frigidimarina NCIMB
400]
Length = 1632
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+D+ ++R++I+ LL++ VT + G + ++ +SN FD +
Sbjct: 1288 KGVRVLVVEDNQLNRQVIDELLRLQGAVVTLAKDGIEGVDWV----TKSNNQFD-----I 1338
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+I D MP M G E I+ F ++P++ M++ L CLE G +++I KP+ +
Sbjct: 1339 VIMDMQMPVMDGLEATHLIRADGRFNDLPILAMTANASLADKTLCLEAGMDDHIGKPIDM 1398
Query: 212 S 212
+
Sbjct: 1399 T 1399
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
++L VDDS + RK++ + L V + +A+ + EQS + ++II
Sbjct: 1146 NILIVDDSKMSRKILSKTLMAHGAYVNEAHNSKQAINLI----EQSLNA--SSHYDVIIM 1199
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIM 184
D+ MP M G E I+ + P +IM
Sbjct: 1200 DWRMPDMNGLETANHIQAMFPAGKAPAIIM 1229
>gi|427720681|ref|YP_007068675.1| integral membrane sensor hybrid histidine kinase [Calothrix sp. PCC
7507]
gi|427353117|gb|AFY35841.1| integral membrane sensor hybrid histidine kinase [Calothrix sp. PCC
7507]
Length = 948
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD + +R I LQ + E G + L+ + F+ +LIITD
Sbjct: 741 VLIVDDHWENRSFIINFLQPLGFAMQEAEHGKQGLE--------KAIEFEP---DLIITD 789
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MP M GYE+L +++S +F+ +PVV+ S+ + LE GA E++ KPV+
Sbjct: 790 ILMPVMDGYEMLASLRQSPLFQNIPVVVSSASVFKSDKHKSLEAGANEFLPKPVQ 844
>gi|422618825|ref|ZP_16687520.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. japonica str. M301072]
gi|330899200|gb|EGH30619.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. japonica str. M301072]
Length = 619
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
++T+ +E +L V+D+ V+R +++ +L+ C+V + +DG ++
Sbjct: 481 LSTLDSHGRERSILLVEDNPVNRTVVQAMLRNLGCEVD-----------IAVDGAEAVAK 529
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
A LI+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++
Sbjct: 530 ASAGNHALILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDD 589
Query: 204 YIVKPVKLSD 213
Y+ KP K +D
Sbjct: 590 YLPKPFKHAD 599
>gi|334364661|ref|ZP_08513641.1| response regulator receiver domain protein [Alistipes sp. HGB5]
gi|390946570|ref|YP_006410330.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Alistipes finegoldii DSM 17242]
gi|313159037|gb|EFR58412.1| response regulator receiver domain protein [Alistipes sp. HGB5]
gi|390423139|gb|AFL77645.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Alistipes finegoldii DSM 17242]
Length = 122
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LII+D MP M G E L+ +K + +F+++PVV++SSED ++ LEEGAE+YIVKP
Sbjct: 49 DLIISDIRMPEMRGDEFLEYLKHNELFKQIPVVMLSSEDSTSERIRLLEEGAEDYIVKP 107
>gi|302843336|ref|XP_002953210.1| hypothetical protein VOLCADRAFT_93905 [Volvox carteri f.
nagariensis]
gi|300261597|gb|EFJ45809.1| hypothetical protein VOLCADRAFT_93905 [Volvox carteri f.
nagariensis]
Length = 1844
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K +L+VDD +V++ +++ LL + +V AV SG AL+Y+ AL +L
Sbjct: 770 KRFLLLSVDDDHVNQSVVKSLLGSTGYEVVAVPSGPEALRYVATA--------PALP-DL 820
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++ D MP M GYE+L++++ + VP++++S++ + L+ GA++Y+ KP K
Sbjct: 821 VLLDCMMPEMDGYEVLQRLRAMTPNVHVPIIMVSAQTEEEHVVCGLDLGADDYVTKPFK 879
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S + ++ +DD V++ +++ +L + +G + L Y+ G + + +
Sbjct: 987 SDQRLIVCIDDDDVNQVVLQGMLASQHYRYVRASTGAQGLSYVC--GTHNG----GIPPD 1040
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
L++ D ++P MTG+++ + I++ ++VPV+++S+ + + L+ GA Y+ KP +
Sbjct: 1041 LVLLDCSLPDMTGFDVCRCIRQMYNKQQVPVIMLSARHNESAVVEGLKCGANTYVTKPFR 1100
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V+D + ++ +L+ VT +G A+ L LD + ++L
Sbjct: 51 KNLSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDAL-LDPSSA--------IDL 101
Query: 152 IITDYTMPGMTGYELLKKIKESSV-FREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++TD MP + G EL+K ++ S FR +P+++MS+ D C E GA++Y+VKPVK
Sbjct: 102 VLTDIMMPEVDGLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVK 161
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK--V 149
K L VL V++ R+++ LL+ +V E+G A Q L + L+ +
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----------EDLQNHI 127
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP+
Sbjct: 128 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 187
Query: 210 K 210
+
Sbjct: 188 R 188
>gi|316935701|ref|YP_004110683.1| Fis family two component sigma54 specific transcriptional regulator
[Rhodopseudomonas palustris DX-1]
gi|315603415|gb|ADU45950.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L DD V R+L+E ++Q + V+SG A+ L D+ ++ ++
Sbjct: 4 RILIADDDAVQRRLVENMVQKCGYETITVDSGDAAVDAL--------TAPDSPAIDAVVL 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MPG+ G +L KI+ S + +VPV++ ++ + + S + GA +++VKPV +
Sbjct: 56 DLVMPGLDGLGVLSKIRASGI--DVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGI 110
>gi|28900985|ref|NP_800640.1| sensory box sensor histidine kinase/response regulator [Vibrio
parahaemolyticus RIMD 2210633]
gi|260366196|ref|ZP_05778656.1| PAS domain protein [Vibrio parahaemolyticus K5030]
gi|260879838|ref|ZP_05892193.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus AN-5034]
gi|260894512|ref|ZP_05903008.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus Peru-466]
gi|28809431|dbj|BAC62473.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus RIMD 2210633]
gi|308086398|gb|EFO36093.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus Peru-466]
gi|308091833|gb|EFO41528.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus AN-5034]
gi|308114853|gb|EFO52393.1| PAS domain protein [Vibrio parahaemolyticus K5030]
Length = 873
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +DS+++R LIE++LQ + K+T E G A++ + L +L+I
Sbjct: 741 LHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSPDLVI 789
Query: 154 TDYTMPGMTGYELLKKIK---ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD +MP G+ + K I+ E+ F P+V S+ + + + G +Y+ KPV+
Sbjct: 790 TDISMPNKDGFGVTKDIRELQENGEFPWCPIVAFSAHAMQEEQQKSIALGMNDYLTKPVQ 849
Query: 211 LSD 213
SD
Sbjct: 850 KSD 852
>gi|153836639|ref|ZP_01989306.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus AQ3810]
gi|149749988|gb|EDM60733.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus AQ3810]
Length = 873
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +DS+++R LIE++LQ + K+T E G A++ + L +L+I
Sbjct: 741 LHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSPDLVI 789
Query: 154 TDYTMPGMTGYELLKKIK---ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD +MP G+ + K I+ E+ F P+V S+ + + + G +Y+ KPV+
Sbjct: 790 TDISMPNKDGFGVTKDIRELQENGEFPWCPIVAFSAHAMQEEQQKSIALGMNDYLTKPVQ 849
Query: 211 LSD 213
SD
Sbjct: 850 KSD 852
>gi|338971942|ref|ZP_08627321.1| nitrogen regulation protein NR(I) [Bradyrhizobiaceae bacterium
SG-6C]
gi|338234836|gb|EGP09947.1| nitrogen regulation protein NR(I) [Bradyrhizobiaceae bacterium
SG-6C]
Length = 504
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q V+SG AL +L + D V+ ++ D
Sbjct: 5 ILIADDDAVQRRLVENMVQRCGYAAVTVDSGDAALAHL--------IDPDTAPVDALVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI++ + ++PV++ ++ + + S + GA +++VKPV +
Sbjct: 57 LVMPGLDGMGVLAKIRDLGL--DLPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGI 110
>gi|260222453|emb|CBA32031.1| Chemotaxis protein cheY [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 129
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISS-CKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
SKEL L VDD R+++ LL+ S E G ALQ L N FD
Sbjct: 1 MSKELRFLIVDDFSTMRRIVRNLLKESGYSDADEAEDGVAALQKL------RNSTFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++D MP M G++LL +IK+ + +PV+++++E I ++GA YIVKP
Sbjct: 52 --FVVSDINMPNMNGFQLLAEIKKDEKLKHIPVLMVTAEARKEDIVLAAQQGASGYIVKP 109
>gi|83312538|ref|YP_422802.1| response regulator [Magnetospirillum magneticum AMB-1]
gi|82947379|dbj|BAE52243.1| Response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Magnetospirillum magneticum AMB-1]
Length = 339
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 12/115 (10%)
Query: 96 VLAVDDSYVDRKLIE-RLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
L +DD+ + L++ RL++I C+V +ES AL + +A ++I+T
Sbjct: 3 ALLIDDNPTNLMLLKHRLIKIEGCEVVCMESALDALAWC-----------EANTPDIILT 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
DY MPGM G + +++++ ++VPVV++++ DV L+ GA +++ KPV
Sbjct: 52 DYMMPGMDGLDFIRQVRRREEMQDVPVVVVTTSDVKEIRQQALDLGAADFLTKPV 106
>gi|375108956|ref|ZP_09755210.1| response regulator receiver protein [Alishewanella jeotgali KCTC
22429]
gi|393761417|ref|ZP_10350054.1| response regulator receiver protein [Alishewanella agri BL06]
gi|374571142|gb|EHR42271.1| response regulator receiver protein [Alishewanella jeotgali KCTC
22429]
gi|392607427|gb|EIW90301.1| response regulator receiver protein [Alishewanella agri BL06]
Length = 127
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYL-GLDGEQSNVGFDAL 147
K + +L VDD R++I+ LL+ + ++ + G+ AL L G D FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNISEADDGSTALPMLQGGD-------FD-- 51
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
++TD+ MPGM G +LL+ I+ + + +PV+++++E QI + + G YIVK
Sbjct: 52 ---FVVTDWNMPGMQGIDLLRAIRADAKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVK 108
Query: 208 P 208
P
Sbjct: 109 P 109
>gi|417322732|ref|ZP_12109266.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus 10329]
gi|328470886|gb|EGF41797.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio parahaemolyticus 10329]
Length = 873
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +DS+++R LIE++LQ + K+T E G A++ + L +L+I
Sbjct: 741 LHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSPDLVI 789
Query: 154 TDYTMPGMTGYELLKKIK---ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD +MP G+ + K I+ E+ F P+V S+ + + + G +Y+ KPV+
Sbjct: 790 TDISMPNKDGFGVTKDIRELQENGEFPWCPIVAFSAHAMQEEQQKSIALGMNDYLTKPVQ 849
Query: 211 LSD 213
SD
Sbjct: 850 KSD 852
>gi|260903049|ref|ZP_05911444.1| PAS domain protein [Vibrio parahaemolyticus AQ4037]
gi|308108353|gb|EFO45893.1| PAS domain protein [Vibrio parahaemolyticus AQ4037]
Length = 873
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +DS+++R LIE++LQ + K+T E G A++ + L +L+I
Sbjct: 741 LHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSPDLVI 789
Query: 154 TDYTMPGMTGYELLKKIK---ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD +MP G+ + K I+ E+ F P+V S+ + + + G +Y+ KPV+
Sbjct: 790 TDISMPNKDGFGVTKDIRELQENGEFPWCPIVAFSAHAMQEEQQKSIALGMNDYLTKPVQ 849
Query: 211 LSD 213
SD
Sbjct: 850 KSD 852
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V+ R+++ LL+ +V AV G +A + + A +L
Sbjct: 16 RSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMR---------GRAYAFDL 66
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G +LL +I + + +PV++MSS+D + + C++ GA +++VKPV+
Sbjct: 67 VLTEVDMPTLSGIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVR 125
>gi|329922247|ref|ZP_08277949.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328942284|gb|EGG38554.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1049
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD V+ K+I LL ++ AV ALQ L EQ + +LII+D
Sbjct: 721 LLIVDDDPVNLKVIHHLLADEGYRIVAVTRAEEALQLL----EQG-------EWDLIISD 769
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP M+GYEL + I++ + E+P++++++ + I GA +Y++KPV
Sbjct: 770 VMMPQMSGYELSRTIRQRYMLSELPILLLTARNRPEDIHMGFISGANDYLIKPV 823
>gi|328874987|gb|EGG23352.1| histidine kinase [Dictyostelium fasciculatum]
Length = 1142
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+ VL VDD+ V+R++ R++Q + C SG AL + + ++I
Sbjct: 1008 EIRVLVVDDNGVNRQVALRMMQSAGCNADLASSGMEALDKM-----------ETTHYDII 1056
Query: 153 ITDYTMPGMTGYELLKKIKE----SSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M G+++ K+I+E V R +P+V M++ CL+ G +YI KP
Sbjct: 1057 FLDIMMPQMDGFQVTKEIREREVQKGVTRMIPIVAMTANAFKEDEAQCLKCGMNDYIPKP 1116
Query: 209 VKLS 212
+K+S
Sbjct: 1117 MKIS 1120
>gi|242280063|ref|YP_002992192.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
gi|242122957|gb|ACS80653.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
Length = 127
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ VL VDD R++I+ +L QI + + GT A + L D + I
Sbjct: 7 MKVLVVDDFATMRRIIKNILRQIGFTNIVEADDGTTAWETLNKDD----------SIQFI 56
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++D+ MP MTG ELL+K++ S F ++P +++++E I ++ YIVKP
Sbjct: 57 VSDWNMPQMTGIELLRKVRASEEFADIPFLMVTAEAQQENIIEAVQAKVSNYIVKP 112
>gi|322419303|ref|YP_004198526.1| CheA signal transduction histidine kinase [Geobacter sp. M18]
gi|320125690|gb|ADW13250.1| CheA signal transduction histidine kinase [Geobacter sp. M18]
Length = 680
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL VDDS R + + +L V SG AL+ + + GFD L
Sbjct: 559 RRLKVLVVDDSITTRTMEQSILVSQGYHVVTAVSGEDALE------KSAEEGFD-----L 607
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+I+D MPG+ G+EL + ++ S +R+ P++I+SS L+ GA+ YIVK
Sbjct: 608 VISDVEMPGINGFELTRMLRASEQYRDTPIIIVSSLSRDEDKRQALQAGAQAYIVK 663
>gi|428318925|ref|YP_007116807.1| adenylate/guanylate cyclase with GAF sensor(s) [Oscillatoria
nigro-viridis PCC 7112]
gi|428242605|gb|AFZ08391.1| adenylate/guanylate cyclase with GAF sensor(s) [Oscillatoria
nigro-viridis PCC 7112]
Length = 552
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ + +L+ R+LQ + KV V +G AL D QS+ +LI+ D
Sbjct: 15 ILVVDDTPDNLRLLIRILQKNGYKVRPVTNGFSAL-----DAIQSSAP------DLILLD 63
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP + GYEL KK+K S F+E+P++ +S+ + E G +YI KP ++ +
Sbjct: 64 IMMPDIDGYELCKKLKAQSQFKEIPIIFLSALEEGINKAKAFEVGGADYITKPFQVKE 121
>gi|433660202|ref|YP_007301061.1| sensory box sensor histidine kinase [Vibrio parahaemolyticus
BB22OP]
gi|432511589|gb|AGB12406.1| sensory box sensor histidine kinase [Vibrio parahaemolyticus
BB22OP]
Length = 873
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L +DS+++R LIE++LQ + K+T E G A++ + L +L+I
Sbjct: 741 LHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSPDLVI 789
Query: 154 TDYTMPGMTGYELLKKIK---ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
TD +MP G+ + K I+ E+ F P+V S+ + + + G +Y+ KPV+
Sbjct: 790 TDISMPNKDGFGVTKDIRELQENGEFPWCPIVAFSAHAMQEEQQKSIALGMNDYLTKPVQ 849
Query: 211 LSD 213
SD
Sbjct: 850 KSD 852
>gi|422650078|ref|ZP_16712885.1| sensory box protein/response regulator [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330963168|gb|EGH63428.1| sensory box protein/response regulator [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 705
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+E LLQ + ESG +AL + D +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQGYETLTAESGEQALAMV-----------DERAPDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPGM GYE+ +K +P++++S+ D S LE GAEEY+ KPV+
Sbjct: 57 IMMPGMDGYEVASVLKAGKGTANIPIIMLSALDEQGARLSGLEAGAEEYLSKPVE 111
>gi|307152857|ref|YP_003888241.1| GAF sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
gi|306983085|gb|ADN14966.1| GAF sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
Length = 1989
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
T+ + VL VDD + + LL+ +V E+G + YL +
Sbjct: 1862 TIGNILADKKVLVVDDDVRNIFALTSLLERHRMQVIPAENGAAGIAYLQ----------N 1911
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
++L++ D MPGM GYE +K I++ F +P++ ++++ + D CL+ GA +YI
Sbjct: 1912 TPDIDLVLMDVMMPGMDGYETMKTIRKIPQFHSLPIIALTAKAMKGDRDKCLDAGASDYI 1971
Query: 206 VKPV 209
KPV
Sbjct: 1972 TKPV 1975
>gi|422297236|ref|ZP_16384875.1| sensor y box protein/response regulator [Pseudomonas avellanae BPIC
631]
gi|407991401|gb|EKG33272.1| sensor y box protein/response regulator [Pseudomonas avellanae BPIC
631]
Length = 705
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+E LLQ + ESG +AL + D +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQGYETLTAESGEQALAMV-----------DERAPDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPGM GYE+ +K +P++++S+ D S LE GAEEY+ KPV+
Sbjct: 57 IMMPGMDGYEVASVLKAGKGTANIPIIMLSALDEQGARLSGLEAGAEEYLSKPVE 111
>gi|15611426|ref|NP_223077.1| response regulator [Helicobacter pylori J99]
gi|385221877|ref|YP_005771010.1| response regulator [Helicobacter pylori SouthAfrica7]
gi|386755439|ref|YP_006228656.1| response regulator [Helicobacter pylori PeCan18]
gi|12229777|sp|Q9ZM64.1|CHEY_HELPJ RecName: Full=Chemotaxis protein CheY homolog
gi|4154896|gb|AAD05946.1| response regulator [Helicobacter pylori J99]
gi|317010656|gb|ADU84403.1| response regulator [Helicobacter pylori SouthAfrica7]
gi|384561697|gb|AFI02163.1| response regulator [Helicobacter pylori PeCan18]
Length = 124
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ + F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>gi|414175408|ref|ZP_11429812.1| hypothetical protein HMPREF9695_03458 [Afipia broomeae ATCC 49717]
gi|410889237|gb|EKS37040.1| hypothetical protein HMPREF9695_03458 [Afipia broomeae ATCC 49717]
Length = 503
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q V+SG AL +L + D V+ ++ D
Sbjct: 5 ILIADDDAVQRRLVENMVQRCGYDAVTVDSGDAALAHL--------IDPDTKPVDALVLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI++ + ++PV++ ++ + + S + GA +++VKPV +
Sbjct: 57 LVMPGLDGMGVLAKIRDIGL--DLPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGI 110
>gi|308273192|emb|CBX29795.1| Chemotaxis protein cheY [uncultured Desulfobacterium sp.]
Length = 124
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ VL VDD R++++ +L+ I + E G AL+ L D K +L
Sbjct: 4 NMKVLVVDDFATMRRIVKNILKKIGFSNIIEAEDGKSALKMLQND-----------KFDL 52
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+ D+ MPGM G ELL KI+ +++P V++++E I ++ G YIVKP
Sbjct: 53 IMCDWNMPGMPGIELLAKIRSDEQLKKIPFVMVTAEAQKNNIICAVKAGVSSYIVKP 109
>gi|359447585|ref|ZP_09237176.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20439]
gi|358038576|dbj|GAA73425.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20439]
Length = 311
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 12/113 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD ++R ++E+ L ++ V SG AL ++ +V+LII D
Sbjct: 7 ILIVDDDALNRIILEKTLS-DEHEIYLVTSGEEALAFV-----------KHTQVDLIILD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM GY++L ++KESS+ +P++ +S+ LE GA +YIVKP
Sbjct: 55 IMMPGMNGYDVLVELKESSLSHAIPIIFISANSSHEDEAKGLELGAMDYIVKP 107
>gi|422630807|ref|ZP_16696001.1| response regulator receiver:ATP-binding region, partial
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330940352|gb|EGH43458.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 187
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
++T+ +E +L V+D+ V+R +++ +L+ C+V + +DG ++
Sbjct: 49 LSTLDSHGRERSILLVEDNPVNRTVVQAMLRNLGCEVD-----------IAVDGAEAVAK 97
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
A LI+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++
Sbjct: 98 ASAGNHALILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDD 157
Query: 204 YIVKPVKLSD 213
Y+ KP K +D
Sbjct: 158 YLPKPFKHAD 167
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K L VL V++ R+++ LL+ +V E+G A Q L + Q+++ +L
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL--EDLQNHI-------DL 129
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP++
Sbjct: 130 VLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
>gi|359445237|ref|ZP_09234984.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. BSi20439]
gi|358040920|dbj|GAA71233.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. BSi20439]
Length = 127
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNIKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQVFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADEKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 109
>gi|374999155|ref|YP_004974653.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
gi|357426580|emb|CBS89509.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
Length = 747
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS R L + +L+ +VT G AL+ L + ++V LII+
Sbjct: 629 HILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERLS----------EGMEVGLIIS 678
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
D MP M G+ LL+ +K E+PV++++S + L GA+ YIVK
Sbjct: 679 DVEMPRMDGFALLQAVKADKHLAEIPVILVTSRASDEDRERGLRLGADAYIVK 731
>gi|334119878|ref|ZP_08493962.1| two component transcriptional regulator, LuxR family [Microcoleus
vaginatus FGP-2]
gi|333457519|gb|EGK86142.1| two component transcriptional regulator, LuxR family [Microcoleus
vaginatus FGP-2]
Length = 244
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L DD + R I L+I+ V A E+G AL GL D + +LI+
Sbjct: 3 LTILVADDDFATRLSITDYLEITGYSVIAAENGKEAL---GL--------VDEFQPHLIV 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TD TMP M GYE +++++ FR +PV+ ++ + + G + Y+ KP +L +
Sbjct: 52 TDITMPEMDGYEFVRRVRTRPAFRLLPVIFLTERTSTQERIRGYQMGCDNYLAKPFELQE 111
>gi|422587280|ref|ZP_16661951.1| sensory box protein/response regulator [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873088|gb|EGH07237.1| sensory box protein/response regulator [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 705
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+E LLQ + ESG +AL + D +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQGYETLTAESGEQALAMV-----------DERAPDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPGM GYE+ +K +P++++S+ D S LE GAEEY+ KPV+
Sbjct: 57 IMMPGMDGYEVASVLKAGKGTANIPIIMLSALDEQGARLSGLEAGAEEYLSKPVE 111
>gi|71282577|ref|YP_270608.1| response regulator/GGDEF domain-containing protein [Colwellia
psychrerythraea 34H]
gi|71148317|gb|AAZ28790.1| response regulator/GGDEF domain protein [Colwellia psychrerythraea
34H]
Length = 566
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 17/120 (14%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQIS--SCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+ + VL VDD VDR+LI+R L+ S SC +T VES AL+ L + FDA
Sbjct: 2 QHMKVLIVDDDIVDRELIKRTLKRSDISCNITEVESVDDALKNL------QDSSFDA--- 52
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS--EDVLTQIDSCLEEGAEEYIVK 207
I+ DY +P G ELL +IK + V++MS+ ED L +C+ GA++++VK
Sbjct: 53 --ILLDYNLPQRNGIELLLEIKGDPNRHDTAVIMMSTSKEDELAL--NCINAGAQDFLVK 108
>gi|291085227|ref|ZP_06352461.2| chemotaxis protein CheY [Citrobacter youngae ATCC 29220]
gi|291072400|gb|EFE10509.1| chemotaxis protein CheY [Citrobacter youngae ATCC 29220]
Length = 136
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + G GF
Sbjct: 9 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQVGG----FGF---- 60
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 61 ---VISDWNMPNMDGLELLKTIRADGAMSSLPVLMVTAEAKKENIIAAAQAGASGYVVKP 117
>gi|294674076|ref|YP_003574692.1| response regulator PhoB [Prevotella ruminicola 23]
gi|294472329|gb|ADE81718.1| response regulator PhoB [Prevotella ruminicola 23]
Length = 121
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LII+D MPGM G + L+ IK++ +F+++PV+++SSED ++ LE GAE+YIVKP
Sbjct: 48 DLIISDIRMPGMRGDDFLEWIKQNELFKQIPVIMLSSEDSTSERIRLLEIGAEDYIVKP 106
>gi|313674524|ref|YP_004052520.1| response regulator receiver protein [Marivirga tractuosa DSM 4126]
gi|312941222|gb|ADR20412.1| response regulator receiver protein [Marivirga tractuosa DSM 4126]
Length = 141
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCK--VTAVESGTRALQYLGLDGEQSNVGFDALKV 149
K+ ++L V+D+ D L + S K + V++G +AL Y+ GE S+ A++
Sbjct: 2 KQANILLVEDNEGDIILTLEAFEESKIKTEINVVKNGEQALDYVFQRGEYSH----AVRP 57
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+LI+ D +P G+E+LK IKE V +++PVV++++ ID E A Y+ KP+
Sbjct: 58 DLILLDINIPIYNGHEVLKSIKEDKVLKKIPVVMLTTSSNPKDIDKAYESHANSYVKKPL 117
Query: 210 KLSD 213
+ D
Sbjct: 118 DMDD 121
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|114776750|ref|ZP_01451793.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
gi|114552836|gb|EAU55267.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
Length = 841
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K LH+L +D+ V++++++ +L+ + V E G +AL L D + FD L
Sbjct: 582 KPLHILLAEDNAVNQEVMQEVLKKAGHNVQLAEDGEQALDALAGDTQ-----FD-----L 631
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++ D MP +G ++LK+ + + PV+++S++ + I C++ GA +Y+ KPV+L
Sbjct: 632 VLLDMNMPKASGLDVLKQFRFMDTTGKTPVLMLSADALPDTIRECMDAGANDYLTKPVQL 691
Query: 212 S 212
+
Sbjct: 692 A 692
>gi|359438460|ref|ZP_09228480.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20311]
gi|358026875|dbj|GAA64729.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20311]
Length = 311
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 12/113 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD ++R ++E+ L ++ V SG AL ++ +V+LII D
Sbjct: 7 ILIVDDDALNRIILEKTLS-DEHEIYLVTSGEEALAFV-----------KHTQVDLIILD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM GY++L ++KESS+ +P++ +S+ LE GA +YIVKP
Sbjct: 55 IMMPGMNGYDVLVELKESSLSHAIPIIFISANSSHEDEAKGLELGAMDYIVKP 107
>gi|237751140|ref|ZP_04581620.1| chemotaxis regulatory protein CheY [Helicobacter bilis ATCC 43879]
gi|229373585|gb|EEO23976.1| chemotaxis regulatory protein CheY [Helicobacter bilis ATCC 43879]
Length = 124
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLG-LDGEQSNVGFDALKVNL 151
+ +L VDDS R++I+ LQ + + E G A + ++G +N+
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLQRLGYEDILEAEHGVEAWNQMSTIEG-----------INV 49
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ITD+ MP M G EL+KK++ ++++P++++++E +++ + L+ G YIVKP
Sbjct: 50 LITDWNMPEMNGLELVKKVRAEEKYKDIPIIMVTTEGGKSEVITALKAGVNNYIVKP 106
>gi|398823058|ref|ZP_10581426.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. YR681]
gi|398226232|gb|EJN12486.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. YR681]
Length = 498
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E ++Q VESG A+ L DA ++ +I D
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYDTVVVESGDAAIAAL--------TAPDAPVIDGVILD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI+++ + VPV++ ++ + + S + GA +++VKPV +
Sbjct: 57 LVMPGLDGMGVLAKIRDAGL--SVPVIVQTAHGGIDNVISAMRAGAADFVVKPVGV 110
>gi|302188802|ref|ZP_07265475.1| PAS:GGDEF [Pseudomonas syringae pv. syringae 642]
Length = 705
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG AL + +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELALAMIKRQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ +IK +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQIKAEKGTANIPIIMLSALDDQSSRLSGLEAGAEEYLNKPV 110
>gi|289679969|ref|ZP_06500859.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine,
partial [Pseudomonas syringae pv. syringae FF5]
Length = 182
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
++T+ +E +L V+D+ V+R +++ +L+ C+V + +DG ++
Sbjct: 44 LSTLDSHGRERSILLVEDNPVNRTVVQAMLRNLGCEVD-----------IAVDGAEAVAK 92
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
A LI+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++
Sbjct: 93 ASAGNHALILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDD 152
Query: 204 YIVKPVKLSD 213
Y+ KP K +D
Sbjct: 153 YLPKPFKHAD 162
>gi|261340268|ref|ZP_05968126.1| chemotaxis protein CheY [Enterobacter cancerogenus ATCC 35316]
gi|288317357|gb|EFC56295.1| chemotaxis protein CheY [Enterobacter cancerogenus ATCC 35316]
Length = 129
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ + +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADAAMASLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|407801875|ref|ZP_11148718.1| type IV pili response regulator PilG [Alcanivorax sp. W11-5]
gi|407024192|gb|EKE35936.1| type IV pili response regulator PilG [Alcanivorax sp. W11-5]
Length = 127
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++L V+ +DDS R+ E LLQ + C V G AL + K N+
Sbjct: 6 QDLKVMVIDDSKTIRRTAETLLQKAGCTVITATDGFDALAKIA-----------DTKPNI 54
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I D MP + GY+ IK +S F++ PV+++SS+D L G++EY+ KP
Sbjct: 55 IFVDIMMPRLDGYQTCALIKNNSAFKDTPVIMLSSKDGLFDKAKGRIVGSDEYLTKP 111
>gi|15614110|ref|NP_242413.1| hypothetical protein BH1547 [Bacillus halodurans C-125]
gi|10174164|dbj|BAB05266.1| BH1547 [Bacillus halodurans C-125]
Length = 661
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
T++ + +L VDD V+ K+I +L + +V V SG A+ L D
Sbjct: 322 TISPVAYRPRILVVDDEPVNLKVIASILANEAYEVKTVISGEEAIAVL-----------D 370
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
+ +L++ D MP M+GYEL K I++ E+P++++++ I++ GA +Y+
Sbjct: 371 TKEWDLVVADVMMPKMSGYELTKNIRQRFTLTELPILLITARSRPEDIENGFRAGANDYL 430
Query: 206 VKPVKL 211
KPV L
Sbjct: 431 TKPVNL 436
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL +D + +++E+LL+ + +VT +G AL L Q N D +LI+T
Sbjct: 14 HVLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDIL-----QHN---DKHCFDLILT 65
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP + G +L+ ++ + V+ +PV++MSSE I GA +Y++KP++
Sbjct: 66 DIMMPKVDGMDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIR 121
>gi|416018326|ref|ZP_11565313.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. B076]
gi|320322881|gb|EFW78972.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. B076]
Length = 705
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG L + L +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K S +P++++S+ D + S LE G EEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGTEEYLNKPV 110
>gi|315644507|ref|ZP_07897639.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
gi|315280014|gb|EFU43311.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
Length = 1031
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 66/114 (57%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V+ +++ LL + + +G +AL+++ +S G D L+ITD
Sbjct: 699 VLLVDDDPVNLQVLRSLLFAENYNLLTASNGVQALEHI-----RSGQGID-----LVITD 748
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+ MPGM+G +L + ++E E+P++++++ + + + L+ GA +++ KPV
Sbjct: 749 WMMPGMSGLQLCRTVREQHTLFELPILMLTARSLPEDVRTGLQAGANDFLRKPV 802
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|404497559|ref|YP_006721665.1| sensor histidine kinase CheA and response receiver CheY associated
with MCPs of class 40H [Geobacter metallireducens GS-15]
gi|78195161|gb|ABB32928.1| sensor histidine kinase CheA and response receiver CheY associated
with MCPs of class 40H [Geobacter metallireducens GS-15]
Length = 777
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 85 ATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF 144
A AE + +L V+DS R L++ +L+ + +V G AL LG + F
Sbjct: 650 APPAEEAAPRSILVVEDSITARTLLKNILEAAGYRVKTAVDGVDALTLLGTED------F 703
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D L+++D MP M G+EL +I+ES E+PVV+++S D + ++ GA Y
Sbjct: 704 D-----LVVSDVDMPRMNGFELTGRIRESRQLAELPVVLVTSLDSREDRERGVDAGANAY 758
Query: 205 IVK 207
IVK
Sbjct: 759 IVK 761
>gi|237654348|ref|YP_002890662.1| CheA signal transduction histidine kinase [Thauera sp. MZ1T]
gi|237625595|gb|ACR02285.1| CheA signal transduction histidine kinase [Thauera sp. MZ1T]
Length = 1907
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 88 AECSKELH---VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF 144
AE LH V+ VDDS RK+ RLL+ +V + G AL+ L +D
Sbjct: 1776 AEAPPPLHLPTVMVVDDSLTVRKITGRLLEREGYRVLTAKDGVDALEQL-ID-------- 1826
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
LK ++++TD MP M G++L++ I+ + ++PVV+++S LE GA+ Y
Sbjct: 1827 --LKPDVVLTDIEMPRMDGFDLVRNIRADARLHDLPVVVITSRLAEKHRRYALEVGADHY 1884
Query: 205 IVKPVK 210
+ KP +
Sbjct: 1885 LGKPYQ 1890
>gi|148546766|ref|YP_001266868.1| response regulator receiver protein [Pseudomonas putida F1]
gi|386011111|ref|YP_005929388.1| Response regulator receiver protein [Pseudomonas putida BIRD-1]
gi|395448038|ref|YP_006388291.1| response regulator receiver protein [Pseudomonas putida ND6]
gi|397695181|ref|YP_006533062.1| response regulator receiver protein [Pseudomonas putida DOT-T1E]
gi|421525266|ref|ZP_15971884.1| Response regulator receiver protein [Pseudomonas putida LS46]
gi|148510824|gb|ABQ77684.1| response regulator receiver protein [Pseudomonas putida F1]
gi|313497817|gb|ADR59183.1| Response regulator receiver protein [Pseudomonas putida BIRD-1]
gi|388562035|gb|AFK71176.1| response regulator receiver protein [Pseudomonas putida ND6]
gi|397331911|gb|AFO48270.1| response regulator receiver protein [Pseudomonas putida DOT-T1E]
gi|402751004|gb|EJX11520.1| Response regulator receiver protein [Pseudomonas putida LS46]
Length = 128
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + + GT AL L E + F
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTDEADDGTTALPML----ENGHYDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM+G +LL+K++ S + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMSGIDLLRKVRASDKLKSMPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|373854676|ref|ZP_09597474.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
gi|372472543|gb|EHP32555.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
Length = 502
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ +R ++ R L+ V G AL+ L A +L++ D
Sbjct: 119 ILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERL-----------RAGPFDLVLLD 167
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP + GY L IK R +PV+++S+ D L + C+E GAE+++ KP
Sbjct: 168 MMMPVLDGYGALDAIKTDPALRHLPVIMISALDELASVVRCIERGAEDFLPKP 220
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK--V 149
K L VL V++ R+++ LL+ +V E+G A Q L + L+ +
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----------EDLQNHI 127
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP+
Sbjct: 128 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 187
Query: 210 K 210
+
Sbjct: 188 R 188
>gi|157834751|pdb|2CHY|A Chain A, Three-Dimensional Structure Of Chey, The Response
Regulator Of Bacterial Chemotaxis
Length = 128
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 1 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
II D+ MP M G ELLK I+ S +PV+++++E I + + GA Y+VKP
Sbjct: 53 ---IICDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 109
>gi|297819166|ref|XP_002877466.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323304|gb|EFH53725.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 199
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 21/128 (16%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ--------ISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
++V+ VDD +V +++ R+L+ + V V+ +AL L + +
Sbjct: 16 INVMVVDDDHVFLQILARMLEKNKYIDPSVMEITVITVDDPKKALSTLEIQRDN------ 69
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
++LIITDY MPGM G +L KKI E F +PV++MSS+ + + L GA +I
Sbjct: 70 ---IDLIITDYYMPGMNGVQLKKKITEK--FGNLPVLVMSSD--TNKEEESLSGGAMGFI 122
Query: 206 VKPVKLSD 213
KP+K SD
Sbjct: 123 TKPIKPSD 130
>gi|443479084|ref|ZP_21068741.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
gi|443015499|gb|ELS30421.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
Length = 336
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
E +L +DD ++R+++ R L+ + +T ESG + L+ + V+L
Sbjct: 6 ESKLLIIDDEQMNREILYRHLRNLGYPNITMAESGKKGLEIVA-----------NQPVDL 54
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+ D MP + G E+L +KE+ +R +PV+I+S+ D + +C+++GAE+Y++KP
Sbjct: 55 ILLDMMMPMLNGLEVLTYLKENPEWRVIPVIIISALDEKEMMLACIQKGAEDYLIKP 111
>gi|418065098|ref|ZP_12702473.1| CheA signal transduction histidine kinase [Geobacter
metallireducens RCH3]
gi|373562730|gb|EHP88937.1| CheA signal transduction histidine kinase [Geobacter
metallireducens RCH3]
Length = 755
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 85 ATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF 144
A AE + +L V+DS R L++ +L+ + +V G AL LG + F
Sbjct: 628 APPAEEAAPRSILVVEDSITARTLLKNILEAAGYRVKTAVDGVDALTLLGTED------F 681
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D L+++D MP M G+EL +I+ES E+PVV+++S D + ++ GA Y
Sbjct: 682 D-----LVVSDVDMPRMNGFELTGRIRESRQLAELPVVLVTSLDSREDRERGVDAGANAY 736
Query: 205 IVK 207
IVK
Sbjct: 737 IVK 739
>gi|347531560|ref|YP_004838323.1| diguanylate cyclase/phosphodiesterase [Roseburia hominis A2-183]
gi|345501708|gb|AEN96391.1| diguanylate cyclase/phosphodiesterase [Roseburia hominis A2-183]
Length = 868
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 69/114 (60%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS +DR ++++L+ + V AV+ G AL+ L +S FDA ++ II D
Sbjct: 7 VLIVDDSELDRIALKKMLKDAYEIVEAVD-GAGALRIL-----ESQKEFDA--ISAIILD 58
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQIDSCLEEGAEEYIVKP 208
MP M G+E L++ ++ +R +PV++ S E DV T+ +CL GA ++I KP
Sbjct: 59 LVMPQMDGFEFLREYRKVDSYRRIPVIVASVERDVKTE-KACLALGARDFIGKP 111
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E +L VDD V+R L++ + + ++ E+G A + L + + KV++I
Sbjct: 723 ERTMLVVDDQEVNRGLLKCIFE-QQYRILEAENGADAFEVLNRE---------SGKVDII 772
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ D MP M G E LK+ ++ +V +PV+I++++D L+ GAE+YIVKP
Sbjct: 773 LLDLAMPVMDGMEFLKRKQQDAVLAGIPVIIITADDTTGHQIQMLQLGAEDYIVKP 828
>gi|226327767|ref|ZP_03803285.1| hypothetical protein PROPEN_01640 [Proteus penneri ATCC 35198]
gi|225203471|gb|EEG85825.1| response regulator receiver domain protein [Proteus penneri ATCC
35198]
Length = 129
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
SK+L L VDD R+++ LL ++ V E G AL L S V F
Sbjct: 2 ASKDLKFLVVDDFSTMRRIVRNLLKELGFTNVEEAEDGADALAKL----RNSAVDF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ITD+ MP M G ELLK I+ + PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VITDWNMPNMDGLELLKNIRSDAGLAATPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|433676473|ref|ZP_20508577.1| Chemotaxis protein cheY [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440732134|ref|ZP_20912098.1| chemotaxis response regulator chey protein [Xanthomonas translucens
DAR61454]
gi|430818411|emb|CCP38877.1| Chemotaxis protein cheY [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440370215|gb|ELQ07151.1| chemotaxis response regulator chey protein [Xanthomonas translucens
DAR61454]
Length = 130
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K + +L VDD R++++ LL + E G AL L + FD
Sbjct: 1 MNKNMRILIVDDFSTMRRIVKNLLGDLGFTNTAEAEDGNSALAAL------RSAPFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G YI+KP
Sbjct: 52 --FIVTDWNMPGMTGIDLLRNVRADDKLKHLPVLMVTAEAKREQIIEAAQAGVNGYIIKP 109
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK--V 149
K L VL V++ R+++ LL+ +V E+G A Q L + L+ +
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----------EDLQNHI 127
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP+
Sbjct: 128 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 187
Query: 210 K 210
+
Sbjct: 188 R 188
>gi|397686299|ref|YP_006523618.1| two-component response regulator CheY [Pseudomonas stutzeri DSM
10701]
gi|395807855|gb|AFN77260.1| two-component response regulator CheY [Pseudomonas stutzeri DSM
10701]
Length = 128
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ TA + GT AL L + GFD
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPML------KSGGFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM+G +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 52 --FLVTDWNMPGMSGIDLLRHVRADDRLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|224370794|ref|YP_002604958.1| protein CheY [Desulfobacterium autotrophicum HRM2]
gi|223693511|gb|ACN16794.1| CheY [Desulfobacterium autotrophicum HRM2]
Length = 124
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++++ +L QI + + GT AL+ L D V+LI
Sbjct: 5 IKILIVDDFATMRRILKNILKQIGFKNILEADDGTTALEVL-----------DRQSVDLI 53
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+D+ MP MTG ELLK ++ S +++ P +++++E + ++ G Y+VKP
Sbjct: 54 ISDWNMPKMTGLELLKSVRASDRYKKTPFLMVTAEAQKQNVIEAVQAGVSNYVVKP 109
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|417860505|ref|ZP_12505561.1| two component response regulator [Agrobacterium tumefaciens F2]
gi|338823569|gb|EGP57537.1| two component response regulator [Agrobacterium tumefaciens F2]
Length = 430
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD+ R + +L+ + +V+ SG RAL+ L D + L+ITD
Sbjct: 126 VLVVDDARTARSGLVEILERQNFRVSEAHSGKRALEILSQDP----------SIQLVITD 175
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVV-IMSSEDVLTQIDSCLEEGAEEYIVKP 208
Y MP M GYEL ++I++SS ++ V+ I SS D L S L+ GA +++ +P
Sbjct: 176 YHMPDMDGYELTRRIRDSSSSEDLRVIGISSSTDRLLSA-SFLKAGASDFVYRP 228
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK--V 149
K L VL V++ R+++ LL+ +V E+G A Q L + L+ +
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----------EDLQNHI 127
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP+
Sbjct: 128 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 187
Query: 210 K 210
+
Sbjct: 188 R 188
>gi|261344156|ref|ZP_05971800.1| chemotaxis protein CheY [Providencia rustigianii DSM 4541]
gi|282567750|gb|EFB73285.1| chemotaxis protein CheY [Providencia rustigianii DSM 4541]
Length = 130
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K+L L VDD R+++ LL ++ K+ E G AL+ + N+ F
Sbjct: 2 AAKDLSFLVVDDFSTMRRIVRNLLKELGFNKIDEAEDGVDALEKI----RAGNIDF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ D+ MP M G ELLK I+ + +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VVADWNMPNMDGLELLKTIRGDEALKHIPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|114566980|ref|YP_754134.1| response regulator receiver protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337915|gb|ABI68763.1| response regulator receiver protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 124
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
++ VDDS + R +L+ + +V + G AL+ + E +++++T
Sbjct: 5 RIIVVDDSEMIRNFHCYILKTAGFQVMSAVDGADALEKIYSSEE---------PIDMVVT 55
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M GY +++++E + E+P++I+S+ED L ++ E GA YIVKP
Sbjct: 56 DINMPNMDGYTFIERLREDEQYEEIPIIIISTEDELKDMERGYEAGANIYIVKP 109
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|218887100|ref|YP_002436421.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758054|gb|ACL08953.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 126
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ VL VDD R++I+ +L Q+ V + GT A + L D ++ +
Sbjct: 7 MRVLVVDDFSTMRRIIKNILRQLGFTNVVEADDGTTAWEILNKD-----------RIEFV 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+D+ MP MTG ELL+K++ S F ++P +++++E + ++ YIVKP
Sbjct: 56 ISDWNMPQMTGIELLRKVRASEEFADMPFLMVTAEAQQENVIEAVQARVSNYIVKP 111
>gi|225872621|ref|YP_002754078.1| chemotaxis protein CheY [Acidobacterium capsulatum ATCC 51196]
gi|225791309|gb|ACO31399.1| chemotaxis protein CheY [Acidobacterium capsulatum ATCC 51196]
Length = 129
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQ---ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+E+ VL VDDS V RK++ER L+ ++ +V SG AL+ L A +
Sbjct: 2 REIKVLIVDDSAVMRKIVERSLRSAGLALAQVWEAGSGKEALEVL-----------QAQQ 50
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V+LI +D MP M G E L ++ + VP+V++++E + ++ GA YI+KP
Sbjct: 51 VDLIFSDINMPEMNGLEFLAQVSAKQLAPGVPIVMITTEGSEEHVVQAVQAGARGYILKP 110
>gi|78047475|ref|YP_363650.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346724803|ref|YP_004851472.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78035905|emb|CAJ23596.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346649550|gb|AEO42174.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 726
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KV V + L + + FDA
Sbjct: 460 RSMRMLVADDHEANRMVLQRLLEKAGHKVACVNGAEQVLDAMAEED------FDA----- 508
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 509 VIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>gi|410620904|ref|ZP_11331759.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159466|dbj|GAC27133.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 127
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K + +L VDD R++I+ LL+ + + + G AL L L G+ FD
Sbjct: 1 MNKNMKILVVDDFSTMRRIIKNLLKDLGFTSIQEADDGNTALPML-LQGD-----FD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + + +PV+++++E QI + + G Y+VKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRANDNLKHLPVLMVTAEAKKEQIVAAAQAGVNGYVVKP 109
>gi|325925186|ref|ZP_08186599.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
gi|325544440|gb|EGD15810.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
Length = 719
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KV V + L + + FDA
Sbjct: 453 RSMRMLVADDHEANRMVLQRLLEKAGHKVACVNGAEQVLDAMAEED------FDA----- 501
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 502 VIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 561
>gi|336322409|ref|YP_004602376.1| response regulator receiver protein [Flexistipes sinusarabici DSM
4947]
gi|336105990|gb|AEI13808.1| response regulator receiver protein [Flexistipes sinusarabici DSM
4947]
Length = 121
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL DDS +R+++ L+ + VT VE G AL + D + + II
Sbjct: 2 LKVLLADDSSTEREMMSSALKSAGFDVTEVEDGDAALDAIKKD-----------RFDCII 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
D MPG GY++ +++K+ +++PVVI++S+ + ++GA+EY+VKP ++
Sbjct: 51 LDIIMPGKNGYQVCRQVKKDESMKDIPVVIVTSKGQDSDKFWGKKQGADEYLVKPFEMD 109
>gi|345110761|pdb|3OLX|A Chain A, Structural And Functional Effects Of Substitution At
Position T+1 In Chey: Cheya88s-Bef3-Mn Complex
gi|345110762|pdb|3OLX|B Chain B, Structural And Functional Effects Of Substitution At
Position T+1 In Chey: Cheya88s-Bef3-Mn Complex
Length = 129
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGYGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV++++SE I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTSEAKKENIIAAAQAGASGYVVKP 110
>gi|256420840|ref|YP_003121493.1| histidine kinase [Chitinophaga pinensis DSM 2588]
gi|256035748|gb|ACU59292.1| histidine kinase [Chitinophaga pinensis DSM 2588]
Length = 577
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LH+L VDD + R + ERLL+ V +S AL L EQ NLI+
Sbjct: 454 LHILVVDDDVMCRTIAERLLRKMVSSVMVADSLENALW---LANEQPP--------NLIL 502
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
D MPG++G E+L +IK +VPV+I S++ I GA+ Y+VKP+ S
Sbjct: 503 LDLNMPGISGKEMLYRIKHHPQLADVPVIICSADAYEETISDMKNFGADGYLVKPITTS 561
>gi|153870385|ref|ZP_01999797.1| Response regulator receiver protein [Beggiatoa sp. PS]
gi|152073147|gb|EDN70201.1| Response regulator receiver protein [Beggiatoa sp. PS]
Length = 855
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E S +L VDD V+ ++ L ++ SG AL L + L
Sbjct: 556 EESDVFKILIVDDEAVNLHVLANHLSLNHYATIQAASGREALSILE----------EGLI 605
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LI+ D MP MTGYE+ +KI+E E+P+V++++++ ++ + LE GA +Y++KP
Sbjct: 606 PDLILLDVMMPHMTGYEVTQKIREHWEANELPIVLLTAKNQVSDLVMGLEVGANDYLIKP 665
Query: 209 V 209
+
Sbjct: 666 I 666
>gi|119476299|ref|ZP_01616650.1| two-component response regulator CheY [marine gamma proteobacterium
HTCC2143]
gi|119450163|gb|EAW31398.1| two-component response regulator CheY [marine gamma proteobacterium
HTCC2143]
Length = 124
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ + + + G+ AL L N FD +
Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNMAEADDGSTALPML------RNGDFD-----FV 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGM+G++LLK ++ + +PV+++++E QI + + G YIVKP
Sbjct: 50 VTDWNMPGMSGFDLLKAVRADEKLKTLPVLMVTAEAKRDQIIAAAQAGVNGYIVKP 105
>gi|414071739|ref|ZP_11407701.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. Bsw20308]
gi|410805832|gb|EKS11836.1| two-component system, chemotaxis family, response regulator CheY
[Pseudoalteromonas sp. Bsw20308]
Length = 127
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + V + G+ AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML------QNQVFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LL+ I+ + +PV+++++E QI + + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLRAIRADDKLKHLPVLMVTAEAKKEQIIAAAQAGVNGYIVKP 109
>gi|294777042|ref|ZP_06742500.1| response regulator receiver domain protein [Bacteroides vulgatus
PC510]
gi|319643030|ref|ZP_07997664.1| two-component system response regulator [Bacteroides sp. 3_1_40A]
gi|345521477|ref|ZP_08800801.1| hypothetical protein BSFG_00895 [Bacteroides sp. 4_3_47FAA]
gi|423314094|ref|ZP_17292029.1| hypothetical protein HMPREF1058_02641 [Bacteroides vulgatus
CL09T03C04]
gi|254834439|gb|EET14748.1| hypothetical protein BSFG_00895 [Bacteroides sp. 4_3_47FAA]
gi|294449100|gb|EFG17642.1| response regulator receiver domain protein [Bacteroides vulgatus
PC510]
gi|317385395|gb|EFV66340.1| two-component system response regulator [Bacteroides sp. 3_1_40A]
gi|392683692|gb|EIY77026.1| hypothetical protein HMPREF1058_02641 [Bacteroides vulgatus
CL09T03C04]
Length = 121
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD K++ L S + +G +++L ++ N+ +LII+D
Sbjct: 5 ILVLDDKIAIAKVLSIYLA-SDYDCIWLPNGIEGVKWL----QEGNIP------DLIISD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G E L+ IK + +F+ +PVV++SSED T+ L+EGAE+YIVKP
Sbjct: 54 IRMPEMRGDEFLEWIKSNQLFKHIPVVMLSSEDSTTERIRLLQEGAEDYIVKP 106
>gi|119898866|ref|YP_934079.1| putative two-component hybrid sensor and regulator [Azoarcus sp.
BH72]
gi|119671279|emb|CAL95192.1| putative two-component hybrid sensor and regulator [Azoarcus sp.
BH72]
Length = 831
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 20/131 (15%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L +L V+D+ V++ + R+L+ KVT V +G A++ FDA +L
Sbjct: 568 RRLDILLVEDNPVNQTVASRMLERVGHKVTVVNNGAEAIE-----------AFDAGHFDL 616
Query: 152 IITDYTMPGMTGYELLKKIKESSV---------FREVPVVIMSSEDVLTQIDSCLEEGAE 202
++ D MP M G E + I+ +R VP+V M++ + + CLE G +
Sbjct: 617 VLMDLQMPVMGGIEATQAIRAREARRSWAVQGGWRAVPIVAMTAHAMESDRARCLEAGMD 676
Query: 203 EYIVKPVKLSD 213
+Y+ KP++ D
Sbjct: 677 DYVAKPIRAGD 687
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|408419249|ref|YP_006760663.1| chemotaxis protein Y, response regulator CheY [Desulfobacula
toluolica Tol2]
gi|405106462|emb|CCK79959.1| CheY: chemotaxis protein Y, response regulator [Desulfobacula
toluolica Tol2]
Length = 141
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 20/119 (16%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK------V 149
+L VDDS R +I+R +A Y+ + ++ G DAL+ +
Sbjct: 5 ILIVDDSLPMRSVIKRTF--------------KAAGYVNSEFHEAANGKDALELMKNDWI 50
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++ITDY MP M G E +K IK+ + +++PVV++S+E T+I ++ GA YI KP
Sbjct: 51 DIVITDYNMPVMNGMEFIKTIKQDDLLKDIPVVVISTEGNETKIKEFMDCGAAGYITKP 109
>gi|284037603|ref|YP_003387533.1| response regulator receiver protein [Spirosoma linguale DSM 74]
gi|283816896|gb|ADB38734.1| response regulator receiver protein [Spirosoma linguale DSM 74]
Length = 153
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQ--ISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
+ K +H+L VDD DR L + +++ E G L +L +G S
Sbjct: 4 QLQKPIHILLVDDDEDDRYLTREAFHQHYPASRISFAEDGEDLLDFLRYEGRYSGAAHTL 63
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
+ LI+ D MP G E L++IK + FR +P+V++++ D I++ GA +I
Sbjct: 64 PE--LILLDLNMPRKDGREALREIKANDDFRHIPIVVLTTSDAKDDIETSYFNGANSFIT 121
Query: 207 KP 208
KP
Sbjct: 122 KP 123
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|374321791|ref|YP_005074920.1| sensor protein [Paenibacillus terrae HPL-003]
gi|357200800|gb|AET58697.1| sensor protein [Paenibacillus terrae HPL-003]
Length = 1023
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLL--QISSCKVTAVESGTRALQYLGLDGEQS 140
A+ VA S +LAVDD V+ +++E +L + S + V S AL L
Sbjct: 679 AVMQVAAGSARSAILAVDDDPVNLRVLEGILASESESYDLVTVTSAQEALHRL------- 731
Query: 141 NVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEG 200
D + +LII D MP M+GYEL ++++E E+PV+++++ + + G
Sbjct: 732 ----DHREWDLIIADVMMPQMSGYELTRRVREYFSISELPVLLLTARSQQEDLYTGFHAG 787
Query: 201 AEEYIVKPV 209
A +YI+KPV
Sbjct: 788 ANDYIMKPV 796
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|325922143|ref|ZP_08183933.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
gi|325547378|gb|EGD18442.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
Length = 724
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 36 PQCTGAPTQRFPFAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELH 95
P GAP Q P S L T L +N PF + +
Sbjct: 412 PMAIGAPVQAAPAQVS----GGALVGTQDELEASNVIAFSN---PFLRHRARV---RSMR 461
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD +R +++RLL+ + KV V + L + + FDA +I D
Sbjct: 462 MLVADDHEANRMVLQRLLEKAGHKVRCVNGAEQVLDAMAEED------FDA-----VIVD 510
Query: 156 YTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 511 LHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPDAIRTCEQAGARAFLAKPV 566
>gi|295690986|ref|YP_003594679.1| histidine kinase [Caulobacter segnis ATCC 21756]
gi|295432889|gb|ADG12061.1| histidine kinase [Caulobacter segnis ATCC 21756]
Length = 842
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD V+R++I L+ C++ E+G AL L ++L++ D
Sbjct: 719 VLVVDDHPVNRRVIRLFLEPFDCELVEAENGQVALDVLA-----------QRPIDLVLMD 767
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
MP + G E ++++ F +PV+ ++++ + QI +CL+ G + ++ KP+ L +
Sbjct: 768 VNMPVLDGLEATRRLRLDPRFYRLPVIALTADVMSAQIKTCLDAGCDAHVAKPIDLRN 825
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ +HVL +D R + +L + +VTAVE+G A L L + + +++
Sbjct: 7 QSIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDEL-LKADSN--------IDI 57
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
++ D MP M G ELL ++E + +PV++MS ++ ++ C+ GA++Y+VKP+++
Sbjct: 58 VLLDLYMPEMDGIELLLLMQEHEHLKRIPVIMMSFDNEQERVAYCIANGAKDYLVKPLRI 117
Query: 212 SD 213
+
Sbjct: 118 QN 119
>gi|51244211|ref|YP_064095.1| two-component system sensory/regulatory protein [Desulfotalea
psychrophila LSv54]
gi|50875248|emb|CAG35088.1| probable two-component system sensory/regulatory protein (hybrid
family) [Desulfotalea psychrophila LSv54]
Length = 910
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L VDD+ ++ ++E +L + +VT E+G L+ L E+S+ +LI+
Sbjct: 788 LKILLVDDNEINLYMMEAILLAAGAEVTLAENGQECLERL----EESSY-------DLIL 836
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP + GYE ++I++ +R +P++ +++ + I+ C E G +++ KP K+ +
Sbjct: 837 MDVQMPVLDGYETTRRIRKDEKYRALPIIAITANALSDDIEKCFEAGMNDHVAKPFKIEE 896
>gi|1421405|pdb|1YMU|A Chain A, Signal Transduction Protein Chey Mutant With Met 17
Replaced By Gly (M17g)
gi|1421406|pdb|1YMU|B Chain B, Signal Transduction Protein Chey Mutant With Met 17
Replaced By Gly (M17g)
Length = 130
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 3 SDKELKFLVVDDFSTGRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGYGF---- 54
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 55 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 111
>gi|381204882|ref|ZP_09911953.1| response regulator receiver protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 126
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++++ +L Q+ + GT AL+ L + K++ +
Sbjct: 7 MTILVVDDFSTMRRIVKNILRQLGFSNTIEADDGTTALEKLKSE-----------KIDFV 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP MTG EL++ I+ S + +P++++++E + I + + G YIVKP
Sbjct: 56 ITDWNMPKMTGLELVRMIRSDSELKHLPILMVTAEALQENIVAAAKAGVNNYIVKP 111
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 100 DDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMP 159
DDS R +I LL+ V A G +A + L E+S ++L++T+ +P
Sbjct: 47 DDST--RHVISALLRKCGYHVAAASDGVKAWEILK---EKS------FNIDLVLTEVELP 95
Query: 160 GMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
M+G+ LL I E + +PV++MSS D ++ + C+ +GA +++VKP++
Sbjct: 96 AMSGFLLLSTIMEHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIR 146
>gi|346309223|ref|ZP_08851322.1| hypothetical protein HMPREF9457_03031 [Dorea formicigenerans
4_6_53AFAA]
gi|345900751|gb|EGX70569.1| hypothetical protein HMPREF9457_03031 [Dorea formicigenerans
4_6_53AFAA]
Length = 142
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
K +L VDD+ ++R +++ +L + + A E+G +A+Q N G D
Sbjct: 5 TDKRQRILIVDDAKLNRDILKEILGETYNYLEA-ENGNQAIQMTA-----DNPGID---- 54
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
L++ D MP M G+E+LK +K+S E PV+++SSED + + E G +YI +P
Sbjct: 55 -LMLLDINMPQMNGFEVLKLMKQSQCLDETPVIMISSEDAVDTMRKAYELGITDYITRP 112
>gi|442609645|ref|ZP_21024381.1| hypothetical protein PALB_13100 [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441748889|emb|CCQ10443.1| hypothetical protein PALB_13100 [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 1387
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL V+D+ V++ + R+L VT E+G ALQ L N D + N+I+ D
Sbjct: 1262 VLLVEDNKVNQIVALRILNELGVVVTVAENGVEALQIL-------NDARDERRFNVILMD 1314
Query: 156 YTMPGMTGYELLKKIKESSV---FREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
MP M GYE KI++ ++ +PV+ M++ + CL+ G ++YI KP+ S
Sbjct: 1315 CQMPLMDGYEATYKIRDGHAGHEYKTIPVIAMTANAMQGDKQKCLDAGMDDYISKPIDTS 1374
>gi|167628686|ref|YP_001679185.1| two component diguanylate cyclase [Heliobacterium modesticaldum
Ice1]
gi|167591426|gb|ABZ83174.1| two component diguanylate cyclase [Heliobacterium modesticaldum
Ice1]
Length = 324
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L +DD+ R ++ +L +V A S AL +L D ++LI+
Sbjct: 1 MGILIIDDAEDTRLYLQAVLASDGFEVYATASAQEALAHLQ----------DRPSIDLIL 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MPG+ G EL ++IK + +R+VPV+++++ + +D GA +YI+KPVK
Sbjct: 51 LDVIMPGIDGIELCQQIKSDAAWRDVPVIMVTALTNIEDLDRAFAAGAMDYIMKPVK 107
>gi|150006437|ref|YP_001301181.1| two-component system response regulator [Bacteroides vulgatus ATCC
8482]
gi|149934861|gb|ABR41559.1| putative two-component system response regulator [Bacteroides
vulgatus ATCC 8482]
Length = 121
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LII+D MP M G E L+ IK + +F+ +PVV++SSED T+ L+EGAE+YIVKP
Sbjct: 48 DLIISDIRMPEMRGDEFLEWIKSNQLFKHIPVVMLSSEDSTTERIRLLQEGAEDYIVKP 106
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V VE+G +A YL QSN+ +L
Sbjct: 41 KTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQSNI-------DL 91
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 92 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 151
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL QSN+ +L
Sbjct: 34 KTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQSNI-------DL 84
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 85 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 144
>gi|452966564|gb|EME71574.1| chemotaxis response regulator protein-glutamate methylesterase
[Magnetospirillum sp. SO-1]
Length = 619
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+ + VL VDD+ ++R L+E LL ++ +V VESG + L + + K +
Sbjct: 242 ESVRVLVVDDNLMNRVLMETLLLRMGVGRVETVESGEKGLAAIARE-----------KPD 290
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
LI+ D MPGM G+E+ ++++ E+PV+ +++ D +C + G + + KP+
Sbjct: 291 LILLDVMMPGMDGFEMCRQLRRRHPLTELPVIFVTALDGPADRTACFQAGGSDMVTKPI 349
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VL V+ RK++ LL+ S KV++ G A + L E N ++L++
Sbjct: 31 VRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLK---ESPN------NIDLVL 81
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++GY LL + E + +PV++MSS D + + C+ +GA +++VKP++
Sbjct: 82 TEVELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIR 138
>gi|329850809|ref|ZP_08265654.1| response regulator [Asticcacaulis biprosthecum C19]
gi|328841124|gb|EGF90695.1| response regulator [Asticcacaulis biprosthecum C19]
Length = 142
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
Query: 93 ELHVLAVDDSYVDRKLIERLL--QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV- 149
+L +L V+D+ D ++ R L + + ++T +G +AL+ L +G+ ++ K
Sbjct: 4 QLDILLVEDNEGDVEMTRRALTTAVPAVRMTVANNGNQALECLHKEGK-----YEGGKTP 58
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LI+ D MP M G L +KES+ F+ +PVV+ +S + I C E A Y+VKP
Sbjct: 59 DLILLDINMPRMDGKAFLNVVKESTEFKSIPVVMFTSSESPADIRECFERHANGYVVKP 117
>gi|384486106|gb|EIE78286.1| hypothetical protein RO3G_02990 [Rhizopus delemar RA 99-880]
Length = 2359
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A+ + A + L VL +D+ V++KL R+L+ V+ V +G A++
Sbjct: 2211 ALPSDASKTVPLEVLLAEDNDVNQKLAVRILEKFGHHVSVVANGKLAVE----------- 2259
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKE----SSVFREVPVVIMSSEDVLTQIDSCLE 198
+++ +LI+ D MP M G+E +KI+E S+ R +P++ +++ ++ + CLE
Sbjct: 2260 AYESQYFDLILMDVQMPVMGGFEATQKIREIEKASASNRHIPIIALTAHAMIGDREKCLE 2319
Query: 199 EGAEEYIVKPVKLSD 213
G +EY+ KP++ +
Sbjct: 2320 AGMDEYVTKPLRFPE 2334
>gi|418054526|ref|ZP_12692582.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
gi|353212151|gb|EHB77551.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
Length = 456
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD + KL+E LQ +V SG +AL L E+ +V ++++ D
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGQQALDLL----ERESV-------DVVLLD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM G+E ++IK S +PVV++++ D T LE GA++++ KPV
Sbjct: 54 VMMPGMDGFETCRRIKASHATHHIPVVMVTALDQPTDKVQGLESGADDFLTKPV 107
>gi|239905676|ref|YP_002952415.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239795540|dbj|BAH74529.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 130
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 16/119 (13%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV--- 149
+L +L VDD RK+I+ +L+ + G +++ D E + + + +
Sbjct: 5 KLRILVVDDFSTMRKIIKSMLR---------KIGVKSID----DAEDGKIALNLINIHTY 51
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LII D+ MP M+G +LLK IK+ + PV++++SE QI + ++ GA YIVKP
Sbjct: 52 DLIILDWNMPNMSGIDLLKSIKKDQKPKYTPVLMVTSEATEPQIITAVQAGASNYIVKP 110
>gi|452852724|ref|YP_007494408.1| Response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio piezophilus]
gi|451896378|emb|CCH49257.1| Response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio piezophilus]
Length = 478
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDDS+ R +E+ L + VT +G AL +DG FD L+IT
Sbjct: 16 HILVVDDSHSVRYALEKHLMEAGFSVTLAVNGEDALSK-AVDG-----SFD-----LVIT 64
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP M GYEL K++K +P++++SS D ++ GA+ Y+ K + D
Sbjct: 65 DIDMPKMDGYELCKRLKNEFKTSHIPIIVLSSRDSDDHVEEGFRVGADAYLAKGGNIED 123
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDDS R +E L+ V +G AL+ L FD NL+ITD
Sbjct: 143 ILVVDDSASVRLFLESGLKEEGFIVETATNGREALERLP--------DFDP---NLVITD 191
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
MP M G EL + IK+S V VPVVIMSS + + EGA +++KP ++
Sbjct: 192 LMMPEMDGAELCRAIKQSEVHNSVPVVIMSSLSDKPLMRRLMREGAATFLIKPFSVA 248
>gi|381168207|ref|ZP_09877407.1| Two-component response transcriptional regulator rcp1
[Phaeospirillum molischianum DSM 120]
gi|380682718|emb|CCG42225.1| Two-component response transcriptional regulator rcp1
[Phaeospirillum molischianum DSM 120]
Length = 146
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISS--CKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
S + VL VDD D L++ I C++ V G A+++L DG G L+
Sbjct: 2 SSQYVVLIVDDDPGDAGLVKAAFSIGRYPCRLDHVTDGMAAMEFL-RDGTSGKNG--TLR 58
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+LI+ D MP G+ +L ++K + R++PVV++++ D I + GA Y+ KP
Sbjct: 59 PDLILLDINMPRKDGHAVLTEVKADARLRDIPVVMLTTSDAERDIATAYRAGASGYVTKP 118
Query: 209 VKLS 212
V +
Sbjct: 119 VDVD 122
>gi|256831227|ref|YP_003159955.1| response regulator receiver protein [Desulfomicrobium baculatum DSM
4028]
gi|256580403|gb|ACU91539.1| response regulator receiver protein [Desulfomicrobium baculatum DSM
4028]
Length = 126
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+ + VL VDD R++I+ +L Q+ + + GT A + L D +
Sbjct: 3 VNTNMRVLIVDDFSTMRRIIKNILRQLGFNNIIEADDGTAAWEILTKD-----------Q 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V+ II+D+ MP MTG ELL+K++ S F ++P +++++E I ++ YIVKP
Sbjct: 52 VDFIISDWNMPQMTGIELLRKVRASEEFGDLPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL QSN+ +L
Sbjct: 36 KTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQSNI-------DL 86
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA E++ KP++
Sbjct: 87 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIR 146
>gi|134094164|ref|YP_001099239.1| response regulator receiver (Che-Y like) [Herminiimonas
arsenicoxydans]
gi|133738067|emb|CAL61112.1| Two component response regulator (Che-Y like) [Herminiimonas
arsenicoxydans]
Length = 148
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGLDGEQSNVGFDA 146
E + +H+L +D+ D ++ R L+ +T V+ G AL Y+ GE +N
Sbjct: 3 EDMQPVHILLAEDTPTDAEMTLRALKKVGLVNNITWVKDGQEALDYIFRKGEFAN----- 57
Query: 147 LKVN----LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
+VN LI+ D MP + G E+LK IK + R +PV++++S I C E G
Sbjct: 58 -RVNGDPTLIMLDLKMPKVNGLEVLKAIKTTESTRIIPVIMLTSSAEEPDIVRCYEHGVN 116
Query: 203 EYIVKPVK 210
YIVKPV+
Sbjct: 117 SYIVKPVE 124
>gi|288941492|ref|YP_003443732.1| response regulator receiver protein [Allochromatium vinosum DSM
180]
gi|288896864|gb|ADC62700.1| response regulator receiver protein [Allochromatium vinosum DSM
180]
Length = 156
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSC-KVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
VL VDD RKLI +++ ++ SG AL YL V+L+I
Sbjct: 26 RVLIVDDMLAMRKLIAAVVRSMGIEQIAEANSGRNALDYLA-----------RFPVDLLI 74
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D+ MP MTG ++L ++ R++PV+++++E Q+ ++ G Y+VKP
Sbjct: 75 CDWNMPSMTGLDVLVTVRADPKLRDLPVLMVTAEQSAQQVSDAIQAGVTSYVVKP 129
>gi|253700420|ref|YP_003021609.1| response regulator receiver protein [Geobacter sp. M21]
gi|251775270|gb|ACT17851.1| response regulator receiver protein [Geobacter sp. M21]
Length = 292
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 74 ETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL 133
E NR + A + +L V+D + R+++ ++L C V
Sbjct: 144 EINRAIARHYLGQPATGPEGKTILLVEDDQLSREMVAKILTKHGCSVET----------- 192
Query: 134 GLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
+DG + ALK L+ITD MP + GYE L I+ FR +PV++M++ +
Sbjct: 193 AIDGMDAFAKIFALKPKLVITDKVMPKLGGYEFLYAIRNIPEFRYMPVILMTAAATPDEE 252
Query: 194 DSCLEEGAEEYIVKPVK 210
LE+G ++++KPVK
Sbjct: 253 KEALEKGFFDFVLKPVK 269
>gi|451980024|ref|ZP_21928424.1| putative PAS domain protein [Nitrospina gracilis 3/211]
gi|451762715|emb|CCQ89644.1| putative PAS domain protein [Nitrospina gracilis 3/211]
Length = 1783
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
KE+ VL +D+ V++ + + L++ KVT E+G ALQ L +QS GFD L
Sbjct: 1414 KEMKVLIAEDNQVNQVIAKELMEKLGFKVTLAENGREALQIL----DQS--GFD-----L 1462
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
++ D MP M G+E +KI+E F+++PV+ +++ + + G +++ KP+
Sbjct: 1463 VLMDIQMPVMDGFEATRKIREQERFKDMPVIALTANAMAGDRERTRAAGMNDHVTKPI 1520
>gi|427738852|ref|YP_007058396.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
gi|427373893|gb|AFY57849.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
Length = 1048
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
+A +++ SK ++L VDD V+ +++ L + +VT SG AL+ + +G+
Sbjct: 725 VANISKNSK-YNILIVDDEPVNLQVLNNHLSLQKYRVTQASSGAEALEIIE-NGD----- 777
Query: 144 FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
KV+L++ D MP M+GY++ K++E ++PVV++++++ +T I + + GA +
Sbjct: 778 ----KVDLMLLDIMMPKMSGYKVCAKLREKYAPHQLPVVMLTAKNQVTNIVTGFKFGAND 833
Query: 204 YIVKP 208
Y+ KP
Sbjct: 834 YLTKP 838
>gi|197117893|ref|YP_002138320.1| response receiver sensor diguanylate cyclase/phosphodiesterase
[Geobacter bemidjiensis Bem]
gi|197087253|gb|ACH38524.1| response receiver sensor diguanylate cyclase/phosphodiesterase, PAS
domain-containing [Geobacter bemidjiensis Bem]
Length = 704
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
V+ VDD R L L+ S V VE+G +AL+ FD ++++ D
Sbjct: 13 VMVVDDDQAVRLLARETLENSGFAVRDVENGEQALEE-----------FDVHAPDIVLLD 61
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPG+ G+ + I+ ++ R+ PV++M+ D L ID E GA ++I KP+
Sbjct: 62 VMMPGIDGFSVCSAIRRTASGRDTPVLMMTGLDDLESIDCAYEAGATDFITKPIN 116
>gi|152997430|ref|YP_001342265.1| response regulator receiver protein [Marinomonas sp. MWYL1]
gi|150838354|gb|ABR72330.1| response regulator receiver protein [Marinomonas sp. MWYL1]
Length = 126
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ + + GT AL L A ++ +
Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTALPIL-----------QAGTIDFL 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGMTG ELL+ ++ + +PV+++++E QI + + G Y+VKP
Sbjct: 50 VTDWNMPGMTGIELLRAVRADEKLKSIPVLMVTAEAKRDQIIAAAQAGVNGYVVKP 105
>gi|406892922|gb|EKD38127.1| hypothetical protein ACD_75C00853G0002 [uncultured bacterium]
Length = 262
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++L +L V+D Y++R L +L+ KVTA G AL +D +L
Sbjct: 135 RQLRILLVEDEYINRTLAITVLEREGWKVTAACDGREALGV-----------YDENAFDL 183
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I+ D MP + GYE + I+ E R VP++ M++ V + CL G + YI KPV
Sbjct: 184 ILMDIQMPELDGYETTRTIRRNEDRTGRHVPIIAMTAYAVKGDREKCLAAGMDGYISKPV 243
Query: 210 K 210
+
Sbjct: 244 R 244
>gi|329964995|ref|ZP_08301983.1| response regulator receiver domain protein [Bacteroides fluxus YIT
12057]
gi|328524145|gb|EGF51219.1| response regulator receiver domain protein [Bacteroides fluxus YIT
12057]
Length = 119
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 17/116 (14%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCK---VTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+L VDD + I ++L + K + VE RA+++L E + LI
Sbjct: 4 ILFVDD----KPAIGKVLSVYLGKENDLVYVEDPIRAIEWLNEGNEPA----------LI 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+D MP MTG E L +K +++FR +PVV++SSE+ T+ + L GAE+YI+KP
Sbjct: 50 ISDIRMPRMTGSEFLCYLKSNALFRHIPVVMLSSEESTTERINLLNAGAEDYILKP 105
>gi|167034904|ref|YP_001670135.1| response regulator receiver protein [Pseudomonas putida GB-1]
gi|166861392|gb|ABY99799.1| response regulator receiver protein [Pseudomonas putida GB-1]
Length = 128
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + + GT AL L N +D
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTEEADDGTTALPML------ENGHYD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM+G +LL+K++ S + +PV+++++E QI + G Y+VKP
Sbjct: 52 --FLVTDWNMPGMSGIDLLRKVRASEKLKSMPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|406934281|gb|EKD68627.1| hypothetical protein ACD_47C00511G0002 [uncultured bacterium]
Length = 811
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL +DS + L+ +L++I +T VE+G RA++ + K +LI D
Sbjct: 693 VLLAEDSPANIALMAKLMKILGHDITVVENGLRAVE-----------AARSQKFDLIFMD 741
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MP M G E +KI+ES + E P+V +++ + IDSCL G + Y KP+ +
Sbjct: 742 VQMPEMDGIEATRKIRESGI--ETPIVAITAAALKDDIDSCLSAGMDAYTSKPINV 795
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLG--LDGEQSNVGFDALKVNL 151
L VLAVDD V K++ER L+ + T V AL L DG Q FD L
Sbjct: 10 LRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQ----FD-----L 60
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+I+D MP M G++LL+ I + ++PV+++S+ + I ++ GA +YIVKPV+L
Sbjct: 61 VISDVVMPNMDGFKLLELI---GLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRL 117
>gi|163801863|ref|ZP_02195760.1| chemotaxis protein CheY [Vibrio sp. AND4]
gi|159174371|gb|EDP59175.1| chemotaxis protein CheY [Vibrio sp. AND4]
Length = 126
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K++ +L VDD R++++ LL+ + + G AL L GFD
Sbjct: 1 MNKDMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPLL------KKGGFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LLK I+ + +++PV+++++E QI + G YIVKP
Sbjct: 52 --FVVTDWNMPGMQGIDLLKHIRADAELKQLPVLMITAEAKREQIIEAAQAGVNGYIVKP 109
>gi|428774340|ref|YP_007166128.1| response regulator receiver protein [Cyanobacterium stanieri PCC
7202]
gi|428688619|gb|AFZ48479.1| response regulator receiver protein [Cyanobacterium stanieri PCC
7202]
Length = 126
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ +L VDDS+ R++I L+ + +V +G A++ L +A K NL+I
Sbjct: 2 IKILVVDDSHAPREMICDTLKQFNIQVAEAINGVEAIKVL-----------EAEKFNLVI 50
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TD MP M GYEL + IKE+ ++VPV+ S+++ I ++G + YIVK + D
Sbjct: 51 TDVVMPEMNGYELCRWIKENPGTKKVPVIFCSTKNQDFDIHWAQKQGGDAYIVKEEFMKD 110
>gi|422604509|ref|ZP_16676525.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. mori str. 301020]
gi|330888167|gb|EGH20828.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. mori str. 301020]
Length = 645
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
KE +L V+D+ V+R +++ +L+ C+V G A+ +++ G AL
Sbjct: 515 KERSILLVEDNPVNRTVVQAMLRNLGCEVDVAVDGAEAVM-------KASAGNHAL---- 563
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
I+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 564 ILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLAKPFKH 623
Query: 212 SD 213
+D
Sbjct: 624 AD 625
>gi|88798985|ref|ZP_01114566.1| CheY-like receiver protein [Reinekea blandensis MED297]
gi|88778212|gb|EAR09406.1| CheY-like receiver protein [Reinekea sp. MED297]
Length = 124
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++++ LL+ + + GT A L QS FD +
Sbjct: 1 MKILVVDDFSTMRRIVKNLLRDLGFTNTHEADDGTSAWPML-----QSG-DFD-----FV 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGMTG ELL+KI+ + VPV+++++E QI + + G Y+VKP
Sbjct: 50 VTDWNMPGMTGIELLQKIRADERLKSVPVLMVTAEAKRDQIVAAAQAGVNGYVVKP 105
>gi|452853162|ref|YP_007494846.1| Response regulator receiver modulated diguanylate cyclase
[Desulfovibrio piezophilus]
gi|451896816|emb|CCH49695.1| Response regulator receiver modulated diguanylate cyclase
[Desulfovibrio piezophilus]
Length = 419
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
++++ L VDDS R I RLL+ +V +G AL+ LG + E +
Sbjct: 127 NRDIKALVVDDSKTMRDSIVRLLKTQLYQVFEAGNGNEALEVLGANPE----------IK 176
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI++DY MP M G+EL+K+++E+ ++ ++ MS+ D L+ GA +++ KP +
Sbjct: 177 LIVSDYEMPEMDGFELIKRVRETYSKNDLAIIGMSAMDAPLLSAQLLKTGANDFVSKPFQ 236
Query: 211 L 211
+
Sbjct: 237 V 237
>gi|408376036|ref|ZP_11173642.1| metal dependent phosphohydrolase with a response regulator receiver
protein [Agrobacterium albertimagni AOL15]
gi|407750138|gb|EKF61648.1| metal dependent phosphohydrolase with a response regulator receiver
protein [Agrobacterium albertimagni AOL15]
Length = 366
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 135 LDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSE-DVLTQI 193
LD ++ + L+ +LII DY MPGM G EL+ ++++ S R+VPV++++SE D +I
Sbjct: 32 LDPSEALMTMQTLQADLIIVDYNMPGMNGVELILRVRQLSNGRDVPVIMLTSETDPAIKI 91
Query: 194 DSCLEEGAEEYIVKPV 209
D+ +E GA E++ KP+
Sbjct: 92 DA-IEAGATEFLTKPI 106
>gi|289628096|ref|ZP_06461050.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289646717|ref|ZP_06478060.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. aesculi str. 2250]
gi|422582614|ref|ZP_16657748.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330867455|gb|EGH02164.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. aesculi str. 0893_23]
Length = 645
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
KE +L V+D+ V+R +++ +L+ C+V G A+ +++ G AL
Sbjct: 515 KERSILLVEDNPVNRTVVQAMLRNLGCEVDVAVDGAEAVM-------KASAGNHAL---- 563
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
I+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 564 ILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLAKPFKH 623
Query: 212 SD 213
+D
Sbjct: 624 AD 625
>gi|304321015|ref|YP_003854658.1| sensor histidine kinase/response regulator [Parvularcula
bermudensis HTCC2503]
gi|303299917|gb|ADM09516.1| sensor histidine kinase/response regulator [Parvularcula
bermudensis HTCC2503]
Length = 517
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 12/117 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL VDD ++R++ LLQ S C + E+G AL L +++++
Sbjct: 384 LKVLIVDDIGLNRQVARLLLQSSGCVCSEAENGQEALDMLA-----------GGPIDIVL 432
Query: 154 TDYTMPGMTGYELLKKIKESS-VFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MP M G+E +++I+ESS + +VPV+ +S+++ + E+G +I KPV
Sbjct: 433 MDLHMPTMDGFEAVRRIRESSEAWGDVPVIALSADEAARRDGELGEKGFNGFIAKPV 489
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL QSN+ +L
Sbjct: 29 KTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQSNI-------DL 79
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D++ + SCL GA +++ KP++
Sbjct: 80 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIR 139
>gi|397165221|ref|ZP_10488674.1| chemotaxis protein CheY [Enterobacter radicincitans DSM 16656]
gi|396093328|gb|EJI90885.1| chemotaxis protein CheY [Enterobacter radicincitans DSM 16656]
Length = 129
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QTGGFGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ S +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADSNMASMPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|313683102|ref|YP_004060840.1| response regulator receiver protein [Sulfuricurvum kujiense DSM
16994]
gi|313155962|gb|ADR34640.1| response regulator receiver protein [Sulfuricurvum kujiense DSM
16994]
Length = 124
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 17/119 (14%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK----V 149
+ +L VDDS R++I+ L S V G LQ G++ L +
Sbjct: 1 MKLLVVDDSSTMRRIIKNTL--SRLGYEDVFEGEDGLQ-----------GWNILNQNPDI 47
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
N++ITD+ MP M G EL+KK++ S F ++P++++++E ++ + L+ G YIVKP
Sbjct: 48 NMLITDWNMPEMNGLELVKKVRADSRFIDLPIIMVTTEGGKVEVVTALKAGVNNYIVKP 106
>gi|429105434|ref|ZP_19167303.1| Two-component sensor protein RcsC [Cronobacter malonaticus 681]
gi|426292157|emb|CCJ93416.1| Two-component sensor protein RcsC [Cronobacter malonaticus 681]
Length = 946
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 40 GAPTQRFP--FAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVL 97
G P +R P + +S+ H +LT + + P A AT AE ++++ +L
Sbjct: 772 GMPVERSPGVWMHSVAAPHELLTLLGRIYSINVDVPGSEPVLP--AAATSAEQNEDMMIL 829
Query: 98 AVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV------NL 151
VDD ++R+L+ A + GT LG +N G DAL V ++
Sbjct: 830 VVDDHPINRRLL------------ADQLGT-----LGYQCRTANDGVDALNVLSKNHIDI 872
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+++D MP M GY L ++I+E + +PVV +++ + + CLE G + + KPV L
Sbjct: 873 VLSDVNMPNMDGYRLTQRIRELGM--TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 930
>gi|429219157|ref|YP_007180801.1| CheY-like receiver domain/winged-helix DNA-binding
domain-containing response regulator [Deinococcus
peraridilitoris DSM 19664]
gi|429130020|gb|AFZ67035.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain protein [Deinococcus peraridilitoris
DSM 19664]
Length = 144
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 119 KVTAVESGTRALQYLGLDGEQSN--VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVF 176
+V G AL +L G + VGF LI+TD MP M G ELLK IK
Sbjct: 32 EVAITNDGRDALDFLYRAGRHAERPVGF----PQLILTDLNMPRMNGLELLKAIKHDETL 87
Query: 177 REVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+PVVI ++ D ++C GAE+Y+VKP D
Sbjct: 88 AHIPVVIFTTSDAERDREACAALGAEDYLVKPGDFQD 124
>gi|389792938|ref|ZP_10196119.1| response regulator receiver protein [Rhodanobacter fulvus Jip2]
gi|388435469|gb|EIL92372.1| response regulator receiver protein [Rhodanobacter fulvus Jip2]
Length = 135
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL---QISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
K + +L VDD R+++ LL S+ + + G AL L N FD
Sbjct: 1 MDKNMKILVVDDFSTMRRIVRNLLVELGFSNPLIQEADDGENALVML------RNQPFD- 53
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
L++TD+ MP MTG +LL+ I+ + +PV+++++E+ QI + + G YIV
Sbjct: 54 ----LVVTDWNMPNMTGIDLLRAIRAEPALKGLPVLMVTAENNRDQIIAAAQAGVNGYIV 109
Query: 207 KP 208
KP
Sbjct: 110 KP 111
>gi|374629884|ref|ZP_09702269.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoplanus limicola DSM 2279]
gi|373907997|gb|EHQ36101.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoplanus limicola DSM 2279]
Length = 442
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
++ T K + +L V+DS + + +L+ C+V E G AL GE
Sbjct: 2 SIMTEERTKKSIKILVVEDSRTQAEFLRYILEEEGCRVMLAEDGREAL------GE---- 51
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
++ K ++++TD MP + GYEL ++IK +++PV++++ + LE GA+
Sbjct: 52 -INSYKPDIVLTDIVMPEIDGYELCRRIKSDDNTKDIPVILVTQLYDPADVIKGLESGAD 110
Query: 203 EYIVKPVKLSD 213
+I+KP + SD
Sbjct: 111 NFIIKPYEQSD 121
>gi|94500299|ref|ZP_01306832.1| CheY-like receiver protein [Oceanobacter sp. RED65]
gi|94427598|gb|EAT12575.1| CheY-like receiver protein [Oceanobacter sp. RED65]
Length = 122
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ + + G AL L + FD +
Sbjct: 1 MKILVVDDFSTMRRIIKNLLRDLGFTNTQEADDGNTALPML------KSGDFD-----FL 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGMTG ELLK ++E +++PV+++++E QI + + G Y+VKP
Sbjct: 50 VTDWNMPGMTGIELLKHVREDERLKDLPVLMVTAEAKRDQIVAAAQAGVNGYVVKP 105
>gi|383779225|ref|YP_005463791.1| putative response regulator receiver domain protein [Actinoplanes
missouriensis 431]
gi|381372457|dbj|BAL89275.1| putative response regulator receiver domain protein [Actinoplanes
missouriensis 431]
Length = 149
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 90 CSKELHVLAVDDSYVDRKLIER-LLQISSCKVT-AVESGTRALQYLGLDGEQSNVGFDAL 147
S+ HVL VDD D +IE LL +++ V VE G AL YL G + +
Sbjct: 4 LSRLQHVLVVDDDPADTMMIEEALLGVATPPVVHTVEDGREALDYLRRHGRYAGMP---- 59
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+ +L++ D MP M G+E+L +IK + +P+V++++ I + + A Y+ K
Sbjct: 60 RPDLVLLDLNMPRMGGHEVLNEIKADDDLKSIPIVVLTTSTAAPDITASYAKHANAYVSK 119
Query: 208 PVKL 211
P+ L
Sbjct: 120 PMDL 123
>gi|301061357|ref|ZP_07202137.1| PAS domain S-box protein [delta proteobacterium NaphS2]
gi|300444534|gb|EFK08519.1| PAS domain S-box protein [delta proteobacterium NaphS2]
Length = 492
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+K+ HVL VDD V R R+L ++T E+G++AL+ LG A ++
Sbjct: 2 AKKTHVLVVDDEKVVRDGCRRVLSGRGYEITTAENGSQALEILG-----------AEHID 50
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+++ D MP M+G E+L++ +++ ++PV++++ + C+++GA ++I KP +
Sbjct: 51 ILLLDLKMPVMSGEEVLERTRDT--HPDIPVIVITGHGTVDTAVECMKKGAYDFITKPFQ 108
Query: 211 LS 212
+
Sbjct: 109 ID 110
>gi|146307826|ref|YP_001188291.1| response regulator receiver protein [Pseudomonas mendocina ymp]
gi|145576027|gb|ABP85559.1| response regulator receiver protein [Pseudomonas mendocina ymp]
Length = 139
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGF 144
T + K + +L VDD R++I+ LL+ TA + GT AL L QS F
Sbjct: 8 TEVDLDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTSALPML-----QSG-SF 61
Query: 145 DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEY 204
D ++TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y
Sbjct: 62 D-----FLVTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGY 116
Query: 205 IVKP 208
+VKP
Sbjct: 117 VVKP 120
>gi|226225764|ref|YP_002759870.1| chemotaxis protein CheY [Gemmatimonas aurantiaca T-27]
gi|226088955|dbj|BAH37400.1| chemotaxis protein CheY [Gemmatimonas aurantiaca T-27]
Length = 123
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ L VDDS R+++ LQ T VE+G DG+++ FD+ + II
Sbjct: 1 MKFLVVDDSATMRRIVINSLQRIGFNDT-VEAG---------DGQEALAKFDS-SIKFII 49
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
TD+ MP MTG E K ++ R VPV+++++ V I + +E G YIVKP
Sbjct: 50 TDWNMPNMTGTEFTKVLRSRDDGRHVPVLMVTARSVKEDILTAMEAGVNNYIVKP 104
>gi|153806160|ref|ZP_01958828.1| hypothetical protein BACCAC_00415 [Bacteroides caccae ATCC 43185]
gi|423218924|ref|ZP_17205420.1| hypothetical protein HMPREF1061_02193 [Bacteroides caccae
CL03T12C61]
gi|149130837|gb|EDM22043.1| response regulator receiver domain protein [Bacteroides caccae ATCC
43185]
gi|392626541|gb|EIY20587.1| hypothetical protein HMPREF1061_02193 [Bacteroides caccae
CL03T12C61]
Length = 121
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Query: 121 TAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVP 180
T +E +A+++L + NV +LII+D MP MTG E L+ +K + +F+ +P
Sbjct: 29 TYLEDPIKAIEWLN----EGNVP------DLIISDIRMPLMTGDEFLRYMKNNELFKSIP 78
Query: 181 VVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+V++SSE+ T+ LEEGAE+YI+KP
Sbjct: 79 IVMLSSEESTTERIRLLEEGAEDYILKP 106
>gi|114320146|ref|YP_741829.1| response regulator receiver protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226540|gb|ABI56339.1| response regulator receiver protein [Alkalilimnicola ehrlichii
MLHE-1]
Length = 131
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K + +L VDD R++I+ LL+ + + G AL L G
Sbjct: 1 MNKNMKILIVDDFSTMRRIIKNLLRDLGFNNTVEADDGKTALPILKRGG----------- 49
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ ++TD+ MPGM+G +LLK+++ +++PV+++++E QI + + G YIVKP
Sbjct: 50 IDFLVTDWNMPGMSGLDLLKEVRADPELKDLPVLMVTAEAKRDQIIAAAQAGVNGYIVKP 109
>gi|398849705|ref|ZP_10606435.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM80]
gi|398972035|ref|ZP_10683892.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM30]
gi|424922096|ref|ZP_18345457.1| Response regulator [Pseudomonas fluorescens R124]
gi|398137746|gb|EJM26788.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM30]
gi|398250502|gb|EJN35819.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM80]
gi|404303256|gb|EJZ57218.1| Response regulator [Pseudomonas fluorescens R124]
Length = 127
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K++ +L VDD R++I+ LL+ + + GT A+ L N G
Sbjct: 1 MNKDMKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVL-------NSG----S 49
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ ++TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 50 IDFLVTDWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 109
>gi|325916716|ref|ZP_08178973.1| Signal transduction histidine kinase [Xanthomonas vesicatoria ATCC
35937]
gi|325537065|gb|EGD08804.1| Signal transduction histidine kinase [Xanthomonas vesicatoria ATCC
35937]
Length = 726
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KV V + L + + FDA
Sbjct: 460 RSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEED------FDA----- 508
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 509 VIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>gi|237799880|ref|ZP_04588341.1| sensory box protein/response regulator, partial [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022735|gb|EGI02792.1| sensory box protein/response regulator [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 464
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD R L+E LL+ + ESG +AL + D +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLRNQHYETLTAESGEQALAMI-----------DERAPDLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPGM GYE+ ++K +P++++S+ D + S LE GAEEY+ KPV+
Sbjct: 57 IMMPGMDGYEVASQLKARKGTANIPIIMLSALDEQSARLSGLEAGAEEYLNKPVE 111
>gi|384419210|ref|YP_005628570.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462123|gb|AEQ96402.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
Length = 725
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + +V V + L + ++ FDA
Sbjct: 459 RSMRMLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAM------ADEDFDA----- 507
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 508 VIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARRFLAKPV 567
>gi|429111021|ref|ZP_19172791.1| Two-component sensor protein RcsC [Cronobacter malonaticus 507]
gi|426312178|emb|CCJ98904.1| Two-component sensor protein RcsC [Cronobacter malonaticus 507]
Length = 949
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 40 GAPTQRFP--FAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVL 97
G P +R P + +S+ H +LT + + P A AT AE ++++ +L
Sbjct: 772 GIPVERSPGVWMHSVAAPHELLTLLGRIYSINVDVPGSEPVLP--AAATSAEQNEDMMIL 829
Query: 98 AVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV------NL 151
VDD ++R+L+ A + GT LG +N G DAL V ++
Sbjct: 830 VVDDHPINRRLL------------ADQLGT-----LGYQCRTANDGVDALNVLSKNHIDI 872
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+++D MP M GY L ++I+E + +PVV +++ + + CLE G + + KPV L
Sbjct: 873 VLSDVNMPNMDGYRLTQRIRELGM--TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 930
>gi|301382876|ref|ZP_07231294.1| chemotaxis protein CheY [Pseudomonas syringae pv. tomato Max13]
gi|302062798|ref|ZP_07254339.1| chemotaxis protein CheY [Pseudomonas syringae pv. tomato K40]
gi|302131297|ref|ZP_07257287.1| chemotaxis protein CheY [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|422658356|ref|ZP_16720791.1| chemotaxis protein CheY [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016984|gb|EGH97040.1| chemotaxis protein CheY [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 132
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
E K + +L VDD R++I+ LL+ + + + G AL L QS FD
Sbjct: 4 ELDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTSEADDGLTALPML-----QSG-AFD-- 55
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
++TD+ MPGMTG +LL++++ + +PV+++++E QI + G Y+VK
Sbjct: 56 ---FLVTDWNMPGMTGIDLLRQVRADDRLKSLPVLMVTAEAKREQIIEAAQAGVNGYVVK 112
Query: 208 P 208
P
Sbjct: 113 P 113
>gi|257486369|ref|ZP_05640410.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422597160|ref|ZP_16671436.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422681303|ref|ZP_16739573.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|330987453|gb|EGH85556.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010647|gb|EGH90703.1| response regulator receiver:ATP-binding region [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 645
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
KE +L V+D+ V+R +++ +L+ C+V G A+ +++ G AL
Sbjct: 515 KERSILLVEDNPVNRTVVQAMLRNLGCEVDVAVDGAEAVM-------KASAGNHAL---- 563
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
I+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 564 ILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLAKPFKH 623
Query: 212 SD 213
+D
Sbjct: 624 AD 625
>gi|77457791|ref|YP_347296.1| response regulator receiver domain-containing protein [Pseudomonas
fluorescens Pf0-1]
gi|398974621|ref|ZP_10685181.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM25]
gi|77381794|gb|ABA73307.1| chemotaxis protein CheY [Pseudomonas fluorescens Pf0-1]
gi|398141339|gb|EJM30264.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM25]
Length = 127
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K++ +L VDD R++I+ LL+ + + GT A+ L N G
Sbjct: 1 MNKDMKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVL-------NSG----S 49
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ ++TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 50 IDFLVTDWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 109
>gi|423344782|ref|ZP_17322471.1| hypothetical protein HMPREF1060_00143 [Parabacteroides merdae
CL03T12C32]
gi|409224373|gb|EKN17306.1| hypothetical protein HMPREF1060_00143 [Parabacteroides merdae
CL03T12C32]
Length = 1344
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 108 LIERLLQISSCKVTAVESGTRALQYL----GLD--------GEQSNVGFDALKVNLIITD 155
L+E + V + LQYL GLD G+++ + +++I+D
Sbjct: 1083 LVEETQNKNKQTVLLADDNQEVLQYLEQQLGLDYIVVKAFNGKEALAMIEESYPHIVISD 1142
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
MP M G EL K+IKE+ + +PV++++++ +++QI+ L+ GA++YIVKP ++S
Sbjct: 1143 IMMPEMNGLELCKRIKENQNYCHIPVILLTAKSMISQIEEGLDAGADDYIVKPFQIS 1199
>gi|389578765|ref|ZP_10168792.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
gi|389400400|gb|EIM62622.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
Length = 124
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++++ +L Q+ + + GT A L ++ K++LI
Sbjct: 5 IKILIVDDFATMRRILKNILKQLGFKNLVEADDGTTAWNVL-----------ESQKIDLI 53
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I+D+ MP MTG ELLKK++ S +++ P +++++E + ++ G Y+VKP
Sbjct: 54 ISDWNMPKMTGLELLKKVRASDQYKKAPFLMVTAEAQKQNVIEAVQAGVSNYVVKP 109
>gi|237824112|pdb|3HEB|A Chain A, Crystal Structure Of Response Regulator Receiver Domain
From Rhodospirillum Rubrum
gi|237824113|pdb|3HEB|B Chain B, Crystal Structure Of Response Regulator Receiver Domain
From Rhodospirillum Rubrum
Length = 152
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGLDGEQSNVGFDALK 148
S + ++ ++D +LIE+ ++ + ++ A GT AL YL D + V A +
Sbjct: 2 SLSVTIVXIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVS--AGR 59
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
L++ D +P TG ++LK +KE+ R PVVI+++ D +I C + GA YI KP
Sbjct: 60 AQLVLLDLNLPDXTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKP 119
Query: 209 VK 210
V
Sbjct: 120 VN 121
>gi|428312476|ref|YP_007123453.1| response regulator containing a CheY-like receiver domain and an
HTH DNA-binding domain [Microcoleus sp. PCC 7113]
gi|428254088|gb|AFZ20047.1| response regulator containing a CheY-like receiver domain and an
HTH DNA-binding domain [Microcoleus sp. PCC 7113]
Length = 165
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 79 FPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSC--KVTAVESGTRALQYLGLD 136
+P A V K + +L +D+ D+ L+++ L+IS + V G L YL
Sbjct: 5 YPCGVRAKVTNPRKRITILLAEDTIADQSLMKQALKISRILNNLYIVNDGEELLDYLHRR 64
Query: 137 GEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSC 196
+ S++ + + +LI+ D+ +P + G E+L+ IK S R +P+V+++S I
Sbjct: 65 HQYSDIA-SSPRPDLILLDWHLPKIDGPEVLQAIKADSNLRRIPIVVLTSSSSEQDIRRS 123
Query: 197 LEEGAEEYIVKPV 209
E GA Y +KP+
Sbjct: 124 YELGASSYFIKPM 136
>gi|427723530|ref|YP_007070807.1| adenylate/guanylate cyclase with integral membrane sensor
[Leptolyngbya sp. PCC 7376]
gi|427355250|gb|AFY37973.1| adenylate/guanylate cyclase with integral membrane sensor
[Leptolyngbya sp. PCC 7376]
Length = 1278
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 59 LTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSC 118
L Q V + + RGF A+ + +L VDD V+ +++ L +
Sbjct: 696 LENIQQSFVMRRLVGDAERGFLTDPETLRADHEERYSILIVDDEPVNVQVLVNHLSLQDY 755
Query: 119 KVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFRE 178
+ +G ALQ + +K ++++ D MP MTGYE+ KK++E E
Sbjct: 756 AIAQASNGIEALQLIE----------SGIKPDIVLLDIMMPRMTGYEVCKKLREKYSLDE 805
Query: 179 VPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+PVV++++++ + + + GA +Y+ KP+
Sbjct: 806 LPVVMLTAKNQVNDLVAGFNCGANDYLTKPI 836
>gi|346306035|gb|AEO22193.1| RpfC [Xanthomonas campestris pv. pelargonii]
Length = 724
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KV V + L + + FDA
Sbjct: 458 RSMRMLVADDHEANRMVLQRLLEKAGHKVRCVNGAEQVLDAM------AEKDFDA----- 506
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 507 VIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPDAIRTCEQAGARAFLAKPV 566
>gi|344171158|emb|CCA83633.1| response regulator receiver ATP-binding histidine kinase, cheA
family [blood disease bacterium R229]
Length = 775
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 59 LTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSC 118
L ++ RLV+ + + RG A HVL VDDS R+L +LL+
Sbjct: 621 LLRSVDRLVRGGRLDKVQRG-------QGAMVQHRKHVLVVDDSLTVRELERKLLEKRGY 673
Query: 119 KVTAVESGTRALQYLGLDGEQSNVGFDALK---VNLIITDYTMPGMTGYELLKKIKESSV 175
VT + +DG G++AL+ +LI+TD MP M G EL+ IK +
Sbjct: 674 AVT-----------VAVDGMDGMDGWNALRGTPFDLIVTDIDMPRMDGIELVTLIKRDAA 722
Query: 176 FREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+ +PV+I+S +D LE GA+ Y+ K
Sbjct: 723 LKALPVMIVSYKDREEDRRRGLEAGADYYLAK 754
>gi|124004919|ref|ZP_01689762.1| signal transduction histidine kinase [Microscilla marina ATCC 23134]
gi|123989597|gb|EAY29143.1| signal transduction histidine kinase [Microscilla marina ATCC 23134]
Length = 1367
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ V+RK+ +L + C ++ ESG +AL + A +LI D
Sbjct: 1108 ILIVDDNIVNRKVASEILNNAGCIISLAESGYQALDKV-----------QAHSYDLIFMD 1156
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
MPGM G E + IK + + P+V M++ + + +EEG ++Y+ KPVK
Sbjct: 1157 IQMPGMDGVETTRAIKGLGIEQLPPIVAMTAYSMKEDRERFMEEGLDDYVSKPVK 1211
>gi|443317340|ref|ZP_21046753.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442783029|gb|ELR92956.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 381
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS +R L++ LL+ VT E+G +AL ++ GE A +LI+ D
Sbjct: 7 VLIVDDSVDNRFLLQSLLEDEGYIVTVAENGAKALDHIAGKGE-------AQLPDLILLD 59
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM+GYE+ + ++ + +P++++++ + + + L+ GA+++I KP
Sbjct: 60 VMMPGMSGYEVTRWVRGQAELPFIPILLVTAHEQ-SNVVEGLDAGADDFIRKP 111
>gi|330808236|ref|YP_004352698.1| chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376344|gb|AEA67694.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 127
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ TA + GT AL L N F
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPML----HSGNFDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG +LL++++ + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMTGIDLLRQVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 109
>gi|420347238|ref|ZP_14848639.1| chemotaxis protein CheY [Shigella boydii 965-58]
gi|391271609|gb|EIQ30481.1| chemotaxis protein CheY [Shigella boydii 965-58]
Length = 129
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + G GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQVGG----YGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|226357961|ref|YP_002787701.1| response regulator, CheY [Deinococcus deserti VCD115]
gi|226320204|gb|ACO48197.1| putative response regulator, CheY [Deinococcus deserti VCD115]
Length = 157
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQ--ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
K +L V+D D L + LL ++ V VE+G +ALQYL + + N +
Sbjct: 8 KSFTLLLVEDELADVALFQDLLADAVAEVDVIHVENGRQALQYLNREDQFLNATYP---- 63
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+L++ D MP M G++ L +K+ R +PV+I+S+ D I A Y+VKP
Sbjct: 64 DLVVLDLNMPVMNGHDFLAHVKQQPELRSIPVMILSTSDHPDDIQRAYHGYASGYVVKP 122
>gi|399520636|ref|ZP_10761408.1| chemotaxis protein CheY [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111125|emb|CCH37967.1| chemotaxis protein CheY [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 128
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ TA + GT AL L QS FD
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTSALPML-----QSG-SFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 52 --FLVTDWNMPGMTGIDLLRAVRADDRLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|224370414|ref|YP_002604578.1| two-component transcriptional regulatory protein [Desulfobacterium
autotrophicum HRM2]
gi|223693131|gb|ACN16414.1| two-component transcriptional regulatory protein [Desulfobacterium
autotrophicum HRM2]
Length = 368
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD + +L+E LL +V VE+G AL+ L + + ++I+ D
Sbjct: 10 ILVVDDEPRNLRLMEALLIPMGYRVQLVENGEAALELL-----------EKISPDVILLD 58
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ +++K R VP+V++++ +T LE GA++++ KPV
Sbjct: 59 VMMPGMDGYEVARQVKSREKTRSVPIVMVTALREVTDRVKALEAGADDFLTKPV 112
>gi|242279353|ref|YP_002991482.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio salexigens DSM 2638]
gi|242122247|gb|ACS79943.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio salexigens DSM 2638]
Length = 455
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDDS R +I L+ S VT +G + L Y N +D L+ITD
Sbjct: 6 VLVVDDSKTIRTVISSELKKHSIDVTEAVNGIQGLDY------TRNHHYD-----LVITD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
TMPG+ GY+L +IK + + PV+I+SS + +I+ E GA YI K
Sbjct: 55 ITMPGIDGYQLCTEIKSNPDTQSTPVIILSSNERHEEIEKGFEVGAAAYITK 106
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 66 LVKEKKFKETNRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIER---LLQISSCK--V 120
L ++ +E +GF A A + + +L +DR + R +L + K +
Sbjct: 83 LSSNERHEEIEKGFEVGAAAYITKNKARQDLLPYIKEILDRAKLLRDKLVLVVDDSKYIL 142
Query: 121 TAVESGTRALQYLGLDGEQSNVGFDALKV------NLIITDYTMPGMTGYELLKKIKESS 174
V++G L G ++ GF+A ++ +LI++D MP M G + +KI+
Sbjct: 143 NVVKTG---LTSAGFKVITASNGFEAFEIASEIVPHLILSDINMPVMDGIKFCEKIQNHP 199
Query: 175 VFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
VP VIMSS + L +GA ++VKP +
Sbjct: 200 SLSHVPFVIMSSGADRRTMRELLHKGAAAFLVKPFNI 236
>gi|212691371|ref|ZP_03299499.1| hypothetical protein BACDOR_00863 [Bacteroides dorei DSM 17855]
gi|237712184|ref|ZP_04542665.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265751875|ref|ZP_06087668.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345513063|ref|ZP_08792586.1| hypothetical protein BSEG_01075 [Bacteroides dorei 5_1_36/D4]
gi|423229446|ref|ZP_17215851.1| hypothetical protein HMPREF1063_01671 [Bacteroides dorei
CL02T00C15]
gi|423240255|ref|ZP_17221370.1| hypothetical protein HMPREF1065_01993 [Bacteroides dorei
CL03T12C01]
gi|423245288|ref|ZP_17226362.1| hypothetical protein HMPREF1064_02568 [Bacteroides dorei
CL02T12C06]
gi|212666124|gb|EEB26696.1| response regulator receiver domain protein [Bacteroides dorei DSM
17855]
gi|229434857|gb|EEO44934.1| hypothetical protein BSEG_01075 [Bacteroides dorei 5_1_36/D4]
gi|229453505|gb|EEO59226.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263236667|gb|EEZ22137.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392633795|gb|EIY27732.1| hypothetical protein HMPREF1063_01671 [Bacteroides dorei
CL02T00C15]
gi|392639458|gb|EIY33275.1| hypothetical protein HMPREF1064_02568 [Bacteroides dorei
CL02T12C06]
gi|392644356|gb|EIY38095.1| hypothetical protein HMPREF1065_01993 [Bacteroides dorei
CL03T12C01]
Length = 121
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD K++ L S + +G +++L ++ N+ +LII+D
Sbjct: 5 ILVLDDKIAIAKVLSIYLA-SDYDCIWLPNGIEGVKWL----QEGNIP------DLIISD 53
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MP M G E L+ IK + +F+ +PV+++SSED T+ L+EGAE+YIVKP
Sbjct: 54 IRMPEMRGDEFLEWIKSNQLFKHIPVIMLSSEDSTTERIRLLQEGAEDYIVKP 106
>gi|113474513|ref|YP_720574.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165561|gb|ABG50101.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1130
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
H+L VDD ++ +++ L+ ++ +VT SG AL L ++N FD LI+
Sbjct: 719 FHILVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAAL-----ENNHNFD-----LIL 768
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP MTGYE+ +I+E + +PV+++++++ + + + GA +Y+ KP
Sbjct: 769 LDIMMPNMTGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGANDYLTKP 823
>gi|347733385|ref|ZP_08866445.1| sensory box protein [Desulfovibrio sp. A2]
gi|347517841|gb|EGY25026.1| sensory box protein [Desulfovibrio sp. A2]
Length = 1103
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 88 AECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
AE ELHVL V+D V++ ++R+L+ S VT L DG+Q+
Sbjct: 969 AETPTELHVLLVEDDAVNQLAVQRMLEKSGMTVT-----------LATDGQQALDALRRA 1017
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVF---REVPVVIMSSEDVLTQIDSCLEEGAEEY 204
K + ++ D MP M G + I+ F +PVV M++ ++ ++ LE G ++Y
Sbjct: 1018 KFDCVVMDVQMPVMDGLAATRAIRTDPAFAARAAIPVVAMTAHAMVGDRETFLEAGMDDY 1077
Query: 205 IVKPVKL 211
+ KPV++
Sbjct: 1078 VSKPVEM 1084
>gi|315127663|ref|YP_004069666.1| two-component response regulator [Pseudoalteromonas sp. SM9913]
gi|315016177|gb|ADT69515.1| two-component response regulator [Pseudoalteromonas sp. SM9913]
Length = 299
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 12/113 (10%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD ++R ++E+ L V V SG AL ++ +V+LII D
Sbjct: 7 ILIVDDDALNRIILEKTLS-DEHDVYLVTSGEDALAFV-----------KHTQVDLIILD 54
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
MPGM GYE+L ++KE+S+ + +P++ +S+ + LE GA +YI KP
Sbjct: 55 IMMPGMNGYEVLVQLKENSISQAIPIIFISANNRHEDEAKGLELGAMDYIGKP 107
>gi|384419270|ref|YP_005628630.1| two-component system response regulatory protein [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|353462183|gb|AEQ96462.1| two-component system response regulatory protein [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 130
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 91 SKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV 149
+K + +L VDD R++++ LL + E G AL L A +
Sbjct: 2 NKNMRILIVDDFSTMRRIVKNLLGDLGFTNTAEAEDGNSALAAL-----------RAGQF 50
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ ++TD+ MPGMTG +LL+ I+ + + +PV+++++E QI + G YI+KP
Sbjct: 51 DFVVTDWNMPGMTGIDLLRNIRADAKLKHLPVMMVTAEAKREQIIEAAQCGVNGYIIKP 109
>gi|218887412|ref|YP_002436733.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758366|gb|ACL09265.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 1162
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 80 PFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ 139
P A A + E LHVL V+D V++ + R+L+ S VT V G +AL L
Sbjct: 1020 PAPANAALPEHQAGLHVLLVEDDAVNQLAVRRMLEKSGMTVTLVTDGQQALDAL------ 1073
Query: 140 SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFRE---VPVVIMSSEDVLTQIDSC 196
+ FD ++ D MP M G + I+ F +PVV M++ ++ +S
Sbjct: 1074 HHAAFDC-----VVMDVQMPVMDGLTATRAIRTDPAFASRAAIPVVAMTAHAMVGDRESF 1128
Query: 197 LEEGAEEYIVKPVKLS 212
+E G ++Y+ KPV++S
Sbjct: 1129 MEAGMDDYVSKPVEMS 1144
>gi|336125536|ref|YP_004577492.1| two-component response regulator [Vibrio anguillarum 775]
gi|335343253|gb|AEH34535.1| Two-component response regulator [Vibrio anguillarum 775]
Length = 324
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 18/119 (15%)
Query: 94 LHVLAVDDSYVDR-KLIERLLQISSCKVTAVESGTRALQ-YLGLDGEQSNVGFDALKVNL 151
+ +L VDD +DR +L RL Q+ V AV SG AL Y D E L
Sbjct: 8 MRILLVDDVQLDRMQLTIRLKQLGH-HVEAVASGQAALDSYCQFDPE------------L 54
Query: 152 IITDYTMPGMTGYELLKKIKESSVFRE-VPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
I+ D +MPGM G+EL KKI++ + E VP++ +S D + I +E G ++Y+ KPV
Sbjct: 55 ILMDISMPGMNGFELSKKIRQQ--YHEWVPIIFLSGHDEPSMIAQAIEAGGDDYLTKPV 111
>gi|239907300|ref|YP_002954041.1| chemotaxis protein CheV [Desulfovibrio magneticus RS-1]
gi|239797166|dbj|BAH76155.1| chemotaxis protein CheV [Desulfovibrio magneticus RS-1]
Length = 329
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG 143
M+ S L DDS + R++++ LL + VTAV++G A + L E+S
Sbjct: 180 MSIEWNSSSRYRALVADDSVLVREMLKDLLNKAGFDVTAVQNGREAWELLSQIKEKSEAE 239
Query: 144 FDALK--VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS--EDVLTQIDSCLEE 199
L V+ ++ D MP M G+ L K+IK+ V RE+PV++ SS D L +
Sbjct: 240 HQPLSNFVHCMVADIEMPAMDGHNLTKRIKDDPVLRELPVILFSSLITDKLRHKGEAV-- 297
Query: 200 GAEEYIVKP 208
GA++ I KP
Sbjct: 298 GADDQISKP 306
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL--KV 149
+ L VL V++ R+++ LL+ S +VTAV +G +A L D L V
Sbjct: 92 RSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSIL-----------DDLTNHV 140
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++ + +P ++G LL KI + +PV++MSS D + + CL +GA ++ VKP+
Sbjct: 141 DLVLAEVALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPI 200
Query: 210 K 210
+
Sbjct: 201 R 201
>gi|257484895|ref|ZP_05638936.1| chemotaxis protein CheY [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|289629012|ref|ZP_06461966.1| chemotaxis protein CheY [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289647089|ref|ZP_06478432.1| chemotaxis protein CheY [Pseudomonas syringae pv. aesculi str.
2250]
gi|416015577|ref|ZP_11563151.1| chemotaxis protein CheY [Pseudomonas syringae pv. glycinea str.
B076]
gi|416026183|ref|ZP_11569716.1| chemotaxis protein CheY [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320325135|gb|EFW81204.1| chemotaxis protein CheY [Pseudomonas syringae pv. glycinea str.
B076]
gi|320329394|gb|EFW85387.1| chemotaxis protein CheY [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 132
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL 147
E K + +L VDD R++I+ LL+ + + + G AL L QS FD
Sbjct: 4 ELDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTSEADDGLTALPML-----QSG-AFD-- 55
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
++TD+ MPGMTG +LL++++ + +PV+++++E QI + G Y+VK
Sbjct: 56 ---FLVTDWNMPGMTGIDLLRQVRADERLKSLPVLMVTAEAKREQIIEAAQAGVNGYVVK 112
Query: 208 P 208
P
Sbjct: 113 P 113
>gi|153867938|ref|ZP_01998111.1| two component system response regulator [Beggiatoa sp. SS]
gi|152144742|gb|EDN71889.1| two component system response regulator [Beggiatoa sp. SS]
Length = 258
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+LAVDD V+ +++ LL + + V V G + L EQ K +LI+ D
Sbjct: 26 ILAVDDEPVNLQVVTNLLSLENYTVKTVMGGAETFELL----EQGE------KPDLILLD 75
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP MTGYE+ +K++E E+P++++++++ ++ + L GA +YI KPV
Sbjct: 76 IMMPKMTGYEVCQKLREQYSATELPIMLLTAKNQVSDLVEGLNVGANDYITKPV 129
>gi|422008195|ref|ZP_16355180.1| response regulator receiver protein [Providencia rettgeri Dmel1]
gi|422018583|ref|ZP_16365140.1| response regulator receiver protein [Providencia alcalifaciens
Dmel2]
gi|414096330|gb|EKT57989.1| response regulator receiver protein [Providencia rettgeri Dmel1]
gi|414104875|gb|EKT66440.1| response regulator receiver protein [Providencia alcalifaciens
Dmel2]
Length = 130
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K+L L VDD R+++ LL ++ K+ E G AL+ + A
Sbjct: 2 AAKDLSFLVVDDFSTMRRIVRNLLKELGFNKIEEAEDGVDALEKI-----------RAGS 50
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ ++ D+ MP M G ELLK I+ + +PV+++++E I + + GA Y+VKP
Sbjct: 51 IDFVVADWNMPNMDGLELLKTIRGDDALKHIPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
++L +D R + +L++ +VT VE+G +AL L + + FD L++
Sbjct: 8 NILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETRE----FD-----LVLL 58
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP M G+ELL ++E +PVV+MS++ I +CL GA++Y+VKPV+ +
Sbjct: 59 DLYMPEMDGFELLTLMQEDEKLSLLPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQE 117
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL--KV 149
+ L VL V++ R+++ LL+ S +VTAV +G +A L D L V
Sbjct: 70 RSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSIL-----------DDLTNHV 118
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++ + +P ++G LL KI + +PV++MSS D + + CL +GA ++ VKP+
Sbjct: 119 DLVLAEVALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPI 178
Query: 210 K 210
+
Sbjct: 179 R 179
>gi|92116783|ref|YP_576512.1| two component, sigma54 specific, Fis family transcriptional
regulator [Nitrobacter hamburgensis X14]
gi|91799677|gb|ABE62052.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Nitrobacter hamburgensis X14]
Length = 492
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L DD V R+L+E +++ VE G A+ L D ++ +I D
Sbjct: 5 ILIADDDAVQRRLVENMVRRCGYDAIVVEGGDAAIAAL--------TASDGPVIDALILD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
MPG+ G +L KI+E+ + VPVV+ ++ + + S + GA ++++KPV +
Sbjct: 57 LVMPGLDGMGVLAKIREAGI--SVPVVVQTAHGGIDNVVSAMRAGAHDFVIKPVGI 110
>gi|390440283|ref|ZP_10228626.1| Two-component response regulator CheY subfamily [Microcystis sp.
T1-4]
gi|389836293|emb|CCI32752.1| Two-component response regulator CheY subfamily [Microcystis sp.
T1-4]
Length = 121
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L V+DS R+LI LL+ S KVT G AL+Y+ ++ N +L+I
Sbjct: 3 EILLVEDSQTQRELICGLLRNSGIKVTIATDGVEALEYI----QRGNP-------DLVIL 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP M GYE+ +++K + + +PVVI SS+ + ++ GA+ YIVKP
Sbjct: 52 DIVMPRMNGYEVCRRLKSDAKTQNIPVVICSSKGEVFDRYWGMKIGADAYIVKP 105
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALKVNLI 152
L VL V+ R++I LL+ S K A V G +A + L E+ + ++LI
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILK---ERPH------NIDLI 115
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
+T+ +P ++GY LL I E + + +PV++MSS+D + + C+ GA +Y+VKP++
Sbjct: 116 LTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIR 173
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V++ R ++ LL+ + TAV +G +A + L + +N ++L
Sbjct: 87 RSLKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQ---DLTN------HIDL 137
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL I R +PV++MSS D + + CL +GA +++VKP++
Sbjct: 138 VLTEVAMPCLSGIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIR 196
>gi|197285521|ref|YP_002151393.1| chemotaxis response regulator [Proteus mirabilis HI4320]
gi|227356016|ref|ZP_03840407.1| response regulator [Proteus mirabilis ATCC 29906]
gi|425068485|ref|ZP_18471601.1| chemotaxis protein CheY [Proteus mirabilis WGLW6]
gi|425072078|ref|ZP_18475184.1| chemotaxis protein CheY [Proteus mirabilis WGLW4]
gi|194683008|emb|CAR43470.1| chemotaxis response regulator [Proteus mirabilis HI4320]
gi|227163793|gb|EEI48701.1| response regulator [Proteus mirabilis ATCC 29906]
gi|404597881|gb|EKA98374.1| chemotaxis protein CheY [Proteus mirabilis WGLW4]
gi|404599478|gb|EKA99932.1| chemotaxis protein CheY [Proteus mirabilis WGLW6]
Length = 129
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
SK+L L VDD R+++ LL ++ V E G AL L QS+
Sbjct: 2 ASKDLRFLVVDDFSTMRRIVRNLLKELGFMNVEEAEDGADALAKL-----QSSA------ 50
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+ +ITD+ MP M G ELLK I+ + +PV+++++E I + + GA Y+VKP
Sbjct: 51 YDFVITDWNMPNMDGLELLKNIRSDAGLATLPVLMVTAEAKKENIIAAAQSGASGYVVKP 110
>gi|426405408|ref|YP_007024379.1| signal transduction histidine kinase [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425862076|gb|AFY03112.1| signal transduction histidine kinase [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 838
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 28/151 (18%)
Query: 78 GFPFWAMATVAECSKEL---------------HVLAVDDSYVDRKLIERLLQISSCKVTA 122
G FW M + EC+ E+ HVL +D V++++ E L KV
Sbjct: 569 GSNFWFMVNLEECAGEVQPQSSEVRFAKIFSGHVLVAEDQIVNQRVAESYLTKLGLKVEI 628
Query: 123 VESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIK--ESSVFREVP 180
+G AL+ + + +D LI D MP M GYE K+++ E+++ R+ P
Sbjct: 629 AGNGQIALE------KARSKSYD-----LIFMDCQMPVMNGYEATKQLRLLENTLGRKTP 677
Query: 181 VVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
VV +++E + SC E G ++++ KP++L
Sbjct: 678 VVALTAEGTSGERKSCYEAGMDDFLTKPLEL 708
>gi|325273564|ref|ZP_08139792.1| response regulator receiver protein [Pseudomonas sp. TJI-51]
gi|324101303|gb|EGB98921.1| response regulator receiver protein [Pseudomonas sp. TJI-51]
Length = 128
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K++ +L VDD R++I+ LL+ + + GT AL L E + F
Sbjct: 1 MNKDMKILIVDDFSTMRRIIKNLLRDLGFTNTDEADDGTTALPML----ENGHYDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM+G +LL+K++ + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMSGIDLLRKVRAHDRLKTMPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|440720171|ref|ZP_20900590.1| PAS:GGDEF protein [Pseudomonas syringae BRIP34876]
gi|440726298|ref|ZP_20906552.1| PAS:GGDEF protein [Pseudomonas syringae BRIP34881]
gi|440366207|gb|ELQ03291.1| PAS:GGDEF protein [Pseudomonas syringae BRIP34876]
gi|440366459|gb|ELQ03538.1| PAS:GGDEF protein [Pseudomonas syringae BRIP34881]
Length = 705
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG AL + +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELALAMIKRQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKAEKNTANIPIIMLSALDDQSSRLSGLEAGAEEYLNKPV 110
>gi|152989425|ref|YP_001349225.1| two-component response regulator CheY [Pseudomonas aeruginosa PA7]
gi|296390177|ref|ZP_06879652.1| two-component response regulator CheY [Pseudomonas aeruginosa PAb1]
gi|313106455|ref|ZP_07792686.1| two-component response regulator CheY [Pseudomonas aeruginosa
39016]
gi|386059736|ref|YP_005976258.1| two-component response regulator CheY [Pseudomonas aeruginosa M18]
gi|386065279|ref|YP_005980583.1| two-component response regulator [Pseudomonas aeruginosa NCGM2.S1]
gi|392985079|ref|YP_006483666.1| two-component response regulator CheY [Pseudomonas aeruginosa DK2]
gi|416856786|ref|ZP_11912321.1| two-component response regulator CheY [Pseudomonas aeruginosa
138244]
gi|416875601|ref|ZP_11918794.1| two-component response regulator CheY [Pseudomonas aeruginosa
152504]
gi|418587093|ref|ZP_13151128.1| two-component response regulator CheY [Pseudomonas aeruginosa
MPAO1/P1]
gi|418590509|ref|ZP_13154418.1| two-component response regulator CheY [Pseudomonas aeruginosa
MPAO1/P2]
gi|419753975|ref|ZP_14280371.1| two-component response regulator CheY [Pseudomonas aeruginosa
PADK2_CF510]
gi|421516090|ref|ZP_15962776.1| two-component response regulator [Pseudomonas aeruginosa PAO579]
gi|424940659|ref|ZP_18356422.1| two-component response regulator CheY [Pseudomonas aeruginosa
NCMG1179]
gi|443473621|ref|ZP_21063644.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor component CheY [Pseudomonas
pseudoalcaligenes KF707]
gi|451986740|ref|ZP_21934908.1| Chemotaxis regulator-transmits chemoreceptor signals to flagelllar
motor components CheY [Pseudomonas aeruginosa 18A]
gi|452879521|ref|ZP_21956613.1| two-component response regulator CheY [Pseudomonas aeruginosa
VRFPA01]
gi|150964583|gb|ABR86608.1| two-component response regulator CheY [Pseudomonas aeruginosa PA7]
gi|270160586|gb|ACZ63263.1| chemotaxis response regulator [Pseudomonas pseudoalcaligenes KF707]
gi|310879188|gb|EFQ37782.1| two-component response regulator CheY [Pseudomonas aeruginosa
39016]
gi|334841351|gb|EGM19982.1| two-component response regulator CheY [Pseudomonas aeruginosa
138244]
gi|334841870|gb|EGM20490.1| two-component response regulator CheY [Pseudomonas aeruginosa
152504]
gi|346057105|dbj|GAA16988.1| two-component response regulator CheY [Pseudomonas aeruginosa
NCMG1179]
gi|347306042|gb|AEO76156.1| two-component response regulator CheY [Pseudomonas aeruginosa M18]
gi|348033838|dbj|BAK89198.1| two-component response regulator [Pseudomonas aeruginosa NCGM2.S1]
gi|375042271|gb|EHS34928.1| two-component response regulator CheY [Pseudomonas aeruginosa
MPAO1/P1]
gi|375050643|gb|EHS43122.1| two-component response regulator CheY [Pseudomonas aeruginosa
MPAO1/P2]
gi|384399630|gb|EIE45997.1| two-component response regulator CheY [Pseudomonas aeruginosa
PADK2_CF510]
gi|392320584|gb|AFM65964.1| two-component response regulator CheY [Pseudomonas aeruginosa DK2]
gi|404349818|gb|EJZ76155.1| two-component response regulator [Pseudomonas aeruginosa PAO579]
gi|442904431|gb|ELS29473.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor component CheY [Pseudomonas
pseudoalcaligenes KF707]
gi|451755562|emb|CCQ87431.1| Chemotaxis regulator-transmits chemoreceptor signals to flagelllar
motor components CheY [Pseudomonas aeruginosa 18A]
gi|452183936|gb|EME10954.1| two-component response regulator CheY [Pseudomonas aeruginosa
VRFPA01]
gi|453048503|gb|EME96216.1| two-component response regulator CheY [Pseudomonas aeruginosa
PA21_ST175]
Length = 128
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ TA + GT AL L N F
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPML----HSGNFDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|359798162|ref|ZP_09300736.1| Proline sensor PrlS [Achromobacter arsenitoxydans SY8]
gi|359363708|gb|EHK65431.1| Proline sensor PrlS [Achromobacter arsenitoxydans SY8]
Length = 1090
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL +D+ +++ + + L+ C+VT G+ AL Y GL K ++++
Sbjct: 861 LSVLVAEDNPINQATLRQQLEQLGCEVTLTSDGSEALMYWGLS-----------KYDVVL 909
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
TD MP M GYEL ++++ +P++ ++ + + + CL G ++VKP+ LS
Sbjct: 910 TDVNMPQMNGYELARELRARGA--TIPIIGFTANAMREEEERCLAAGMTSWLVKPISLS 966
>gi|153869210|ref|ZP_01998873.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
gi|152074257|gb|EDN71132.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
Length = 1134
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD + + +L+ + +V + ++G AL+ L E S++ L++ D
Sbjct: 1016 VLIVDDDMRNIFALATVLEDKNMEVVSADNGHEALKLLA---ENSDIA-------LVLMD 1065
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MP M GYE +++I++S FR++P++ ++++ + C+E GA +Y+ KPV
Sbjct: 1066 IMMPEMDGYETMRQIRQSPNFRKLPIIALTAKAMKGDKAKCIEAGANDYLSKPV 1119
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDA 146
+A+ K L V+A DS V ++ I LL +T + ALQ+L + FD
Sbjct: 863 LAQTVKNLLVIA--DSEVHQQKILALLDTKEVNITLAVTRANALQHL------KKIAFDC 914
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
II D + +G +LL+++++ S +VP++ + ++ T+ ++ L + A+E +
Sbjct: 915 -----IILDMDIEQQSGIKLLEQMQQESGLCQVPLITYADRELTTEEEALLLQCADELPI 969
Query: 207 KPV 209
K V
Sbjct: 970 KSV 972
>gi|223935979|ref|ZP_03627893.1| response regulator receiver protein [bacterium Ellin514]
gi|223895201|gb|EEF61648.1| response regulator receiver protein [bacterium Ellin514]
Length = 145
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 96 VLAVDDSYVDRKLIERLLQI--SSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+L+VDD D L+ R LQ + C + +V S A++YL G ++ ++ ++I+
Sbjct: 4 ILSVDDGEDDAYLLHRALQYVQTKCNLESVPSAAAAMEYLSGTGPFAD-RYEHPLPSIIL 62
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
D MP G+ELL+ I+ F+ +PV++++ + I+ E GA Y+VK + +
Sbjct: 63 LDIKMPDTNGFELLRWIRSKPEFKSIPVIMLTCSEAAVDIEHAYEIGANSYLVKSLDFQN 122
>gi|430004644|emb|CCF20443.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Rhizobium sp.]
Length = 525
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L VDD V R+L++ L+ V E+G L +L G+Q +N+I+
Sbjct: 4 QILVVDDDPVQRRLLKNALERHGHVVHTAENGLGGLAFLKHGGDQ---------INVIVL 54
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
D MPG+ G LK +E+ + E PV++ + + + + GA +++VKPV
Sbjct: 55 DLMMPGLDGLGFLKATREAGI--ETPVIVQTGHGGIETVVEAMRAGAFDFVVKPV 107
>gi|237803508|ref|ZP_04591093.1| sensor histidine kinase/response regulator, partial [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331025490|gb|EGI05546.1| sensor histidine kinase/response regulator [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 462
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
K +L V+D+ V+R +++ +L C+V G A+ G VG K
Sbjct: 331 GKARRILLVEDNPVNRTVVQAMLHNLGCEVEVAVDGVEAVAKAG-------VG----KYA 379
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+ D +P M GYE ++I++ S +P++ +++ + D+CL+ G ++Y+ KP K
Sbjct: 380 LILMDCRLPVMDGYEATRRIRQLSGLERIPIIALTANALQGDRDACLQAGMDDYLPKPFK 439
Query: 211 LSD 213
+D
Sbjct: 440 HAD 442
>gi|428319691|ref|YP_007117573.1| two component transcriptional regulator, LuxR family [Oscillatoria
nigro-viridis PCC 7112]
gi|428243371|gb|AFZ09157.1| two component transcriptional regulator, LuxR family [Oscillatoria
nigro-viridis PCC 7112]
Length = 244
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L DD + R I L+I+ V A E+G +AL GL D + +LI+
Sbjct: 3 LTILVADDDFATRLSITDYLEITGYSVIAAENGKQAL---GL--------VDEFQPHLIV 51
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TD TMP M GY+ +++++ FR +PV+ ++ + + G + Y+ KP +L +
Sbjct: 52 TDITMPEMDGYDFVRRVRTRPAFRLLPVIFLTERTSTEERIRGYQMGCDNYLAKPFELQE 111
>gi|443645245|ref|ZP_21129095.1| Response regulator receiver/GGDEF/PAS/EAL domain protein
[Pseudomonas syringae pv. syringae B64]
gi|443285262|gb|ELS44267.1| Response regulator receiver/GGDEF/PAS/EAL domain protein
[Pseudomonas syringae pv. syringae B64]
Length = 705
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG AL + +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELALAMIKRQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKTEKNTANIPIIMLSALDDQSSRLSGLEAGAEEYLNKPV 110
>gi|407716388|ref|YP_006837668.1| response regulator/GGDEF domain-containing protein [Cycloclasticus
sp. P1]
gi|407256724|gb|AFT67165.1| Response regulator/GGDEF domain protein [Cycloclasticus sp. P1]
Length = 571
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 17/118 (14%)
Query: 94 LHVLAVDDSYVDRKLIERLLQIS--SCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+++L VDD VDR+LI R L+ S SC+++ VES + L+ L + FDA
Sbjct: 1 MNILIVDDDIVDRELITRTLKRSNISCEISGVESADQGLEQL------KKMEFDA----- 49
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS--EDVLTQIDSCLEEGAEEYIVK 207
++ DY +P G ELL +++ + +V V++MS+ +D L +C+ GA++++VK
Sbjct: 50 VLLDYNLPKRNGIELLVELRNAHERHDVAVIMMSTSKDDELAL--NCINAGAQDFLVK 105
>gi|409405789|ref|ZP_11254251.1| chemotaxis regulator protein [Herbaspirillum sp. GW103]
gi|386434338|gb|EIJ47163.1| chemotaxis regulator protein [Herbaspirillum sp. GW103]
Length = 135
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+ + + L VDD R+++ LL ++ K+ + G+ AL+ L G AL
Sbjct: 2 AADDQYFLVVDDFSTMRRIVSGLLKELEYTKMVEADDGSSALKIL-------EAG--ALP 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
V ++TD+ MPGM G LLKKI+ + +PV+++++E I + GA+ YIVKP
Sbjct: 53 VTFVLTDWNMPGMDGLTLLKKIRATPSLAHLPVLMITAEAKKENIVVAAQSGADGYIVKP 112
>gi|329906606|ref|ZP_08274455.1| multi-sensor hybrid histidine kinase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547217|gb|EGF32072.1| multi-sensor hybrid histidine kinase [Oxalobacteraceae bacterium
IMCC9480]
Length = 656
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 105 DRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK-------VNLIITDYT 157
DR R + + V + S T AL++ GL+ GF+A+ ++L++ D
Sbjct: 526 DRVFEGRRVLLVDDDVRNIFSMTSALEHQGLEVVVGRNGFEAISQLELIGDIDLVLMDVM 585
Query: 158 MPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
MPGM G E ++I+ + FR +P++ ++++ + + C+ GA +Y+ KPV LS
Sbjct: 586 MPGMDGLEATRRIRADTRFRNLPIIAITAKAMKDDQEHCISAGASDYLAKPVDLS 640
Score = 43.5 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL V+D R+ + L+ ++TAV SG A+ L +V +D + I D
Sbjct: 388 VLLVEDDVRQRESMVHLIGDDDVEITAVASGEEAMALL------HSVTYDCM-----IID 436
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK----PVKL 211
++P M G+ELL+++ + PV++ + ++ + ++ L++ + I+K P +L
Sbjct: 437 LSLPDMQGHELLQRMGTDLISAFPPVIVYTGRNLTREEETSLQKYSRSIIIKGARSPERL 496
Query: 212 SD 213
D
Sbjct: 497 LD 498
>gi|58582493|ref|YP_201509.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84624381|ref|YP_451753.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427087|gb|AAW76124.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368321|dbj|BAE69479.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 725
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + +V V + L + ++ FDA
Sbjct: 459 RSMRMLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAM------ADEDFDA----- 507
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM+G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 508 VIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 567
>gi|302765190|ref|XP_002966016.1| hypothetical protein SELMODRAFT_84824 [Selaginella moellendorffii]
gi|300166830|gb|EFJ33436.1| hypothetical protein SELMODRAFT_84824 [Selaginella moellendorffii]
Length = 740
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +LAVDD+ V+R +I RLL CK T VESG L+ L +G + ++++
Sbjct: 620 LKILAVDDNAVNRTVIRRLLNNLGCKSTVVESGETCLKTLAAEGPSA--------YSIVL 671
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MP M GYEL +I++ + +V +++ + + CL G + + KPV L
Sbjct: 672 VDLCMPEMDGYELTAEIQKLYPREGLHIVALTANTDDSTREKCLSLGMKAVLTKPVSL 729
>gi|219117662|ref|XP_002179622.1| ethylene receptor 1 [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408675|gb|EEC48608.1| ethylene receptor 1 [Phaeodactylum tricornutum CCAP 1055/1]
Length = 833
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
L VDDS ++ K+++++L ++ ++ SG ALQY+ E S + NLI
Sbjct: 696 FRTLIVDDSTINLKVMKQMLSRLGVQQILVAHSGKEALQYIK---ESSKMHVP----NLI 748
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TD MPGMTGYELLK+++E F + ++ S++ C+ G E I KP+ L+
Sbjct: 749 LTDLQMPGMTGYELLKQLRELKHFPQAKIMACSADWSSETEAKCVHVGFEGLIRKPITLT 808
>gi|386748270|ref|YP_006221478.1| response regulator [Helicobacter cetorum MIT 99-5656]
gi|386749382|ref|YP_006222589.1| response regulator [Helicobacter cetorum MIT 00-7128]
gi|384554512|gb|AFI06268.1| response regulator [Helicobacter cetorum MIT 99-5656]
gi|384555625|gb|AFI03959.1| response regulator [Helicobacter cetorum MIT 00-7128]
Length = 124
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ + E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDILEAEHGVEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRADDRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>gi|154493674|ref|ZP_02032994.1| hypothetical protein PARMER_03015 [Parabacteroides merdae ATCC 43184]
gi|154086884|gb|EDN85929.1| response regulator receiver domain protein [Parabacteroides merdae
ATCC 43184]
Length = 1348
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL---GLDGEQ 139
++ AE SK+ +L + +++ + LL + +V +L Y+ +G++
Sbjct: 1073 VLSKSAEISKKFDLLVEETQNKNKQTV--LLADDNQEVLQYLEQQLSLDYIVVKAFNGKE 1130
Query: 140 SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
+ + +++I+D MP M G EL K+IKE+ + +PV++++++ +++QI+ L+
Sbjct: 1131 ALAMIEESYPHIVISDIMMPEMNGLELCKRIKENQNYCHIPVILLTAKSMISQIEEGLDA 1190
Query: 200 GAEEYIVKPVKLS 212
GA++YIVKP ++S
Sbjct: 1191 GADDYIVKPFQIS 1203
>gi|357009921|ref|ZP_09074920.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 998
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
E +++LAVDD V+ ++ +L ++T S L+ L D +
Sbjct: 662 ENDGRVNILAVDDDPVNLNVLVGILSSEPYRITTAHSAREVLELL-----------DTQQ 710
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+L+I D MP M+GYEL +K++E E+PV+++++ I + + GA +Y+ KP
Sbjct: 711 WDLLIADVMMPQMSGYELTQKVREQYSLSELPVLLLTARSQPADIYTGFKSGANDYVTKP 770
Query: 209 V 209
V
Sbjct: 771 V 771
>gi|325294250|ref|YP_004280764.1| response regulator receiver modulated CheW protein
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064698|gb|ADY72705.1| response regulator receiver modulated CheW protein
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 321
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV-GFDAL 147
E +L +DDS V RK+I ++L+ V ++G ALQ L E++ G D
Sbjct: 184 EKKGHFKILILDDSPVARKIIRKILENDGHTVFEAQNGIEALQMLHKWLEEAKTTGRDIT 243
Query: 148 K-VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
V LII+D MPGM G +K+KE + F ++PV+I +S +D GA+ ++V
Sbjct: 244 DYVQLIISDIEMPGMDGLTFTRKVKEDTEFSKIPVIINTSLSDRANVDKSRFVGADAHLV 303
Query: 207 K 207
K
Sbjct: 304 K 304
>gi|183598606|ref|ZP_02960099.1| hypothetical protein PROSTU_02004 [Providencia stuartii ATCC 25827]
gi|386744949|ref|YP_006218128.1| chemotaxis regulatory protein CheY [Providencia stuartii MRSN 2154]
gi|188020783|gb|EDU58823.1| chemotaxis protein CheY [Providencia stuartii ATCC 25827]
gi|384481642|gb|AFH95437.1| chemotaxis regulatory protein CheY [Providencia stuartii MRSN 2154]
Length = 130
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
+K+L L VDD R+++ LL ++ K+ E G AL+ + A
Sbjct: 2 AAKDLSFLVVDDFSTMRRIVRNLLKELGFNKIEEAEDGVDALEKI-----------RAGH 50
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ ++ D+ MP M G ELLK I+ + +PV+++++E I + + GA Y+VKP
Sbjct: 51 IDFVVADWNMPNMDGLELLKTIRGDEALKHIPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>gi|119944738|ref|YP_942418.1| sensor histidine kinase [Psychromonas ingrahamii 37]
gi|119863342|gb|ABM02819.1| amino acid-binding domain sensor hybrid histidine kinase
[Psychromonas ingrahamii 37]
Length = 1574
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 12/124 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ LH L VDD+ V K+IE++L VT ESG +AL L ++ +G + V+L
Sbjct: 1070 RGLHALVVDDNPVTLKVIEKMLIHLKFNVTTTESGEKALSVL-----ENALGNNT--VDL 1122
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSED---VLTQIDSCLEEGAEEYIVKP 208
I D+ M G+ G E KKIKE+ ++P+V+MS D +L Q + G + +++KP
Sbjct: 1123 AIIDWQMGGIDGIETAKKIKENPSIPKMPMVLMSGSDRDGLLGQ--KSKQVGFDSFVLKP 1180
Query: 209 VKLS 212
V S
Sbjct: 1181 VNRS 1184
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 21/124 (16%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L VDD+ ++R++ L+ + VT +G A+ + +S+V FDA ++ D
Sbjct: 1223 ILLVDDNEINRQVAREFLENAGLLVTTATNGREAVNSV-----KSHV-FDA-----VLMD 1271
Query: 156 YTMPGMTGYELLKKIKESSVFRE----------VPVVIMSSEDVLTQIDSCLEEGAEEYI 205
MP + GYE +KI+ R +P++ M++ + + CL G +Y+
Sbjct: 1272 VQMPEIDGYEATQKIRRWEKTRVDLQPTDGSPVLPIIAMTAHAMEGDKERCLAAGMNDYV 1331
Query: 206 VKPV 209
KP+
Sbjct: 1332 TKPI 1335
>gi|85712288|ref|ZP_01043339.1| Chemotaxis protein CheY [Idiomarina baltica OS145]
gi|85693915|gb|EAQ31862.1| Chemotaxis protein CheY [Idiomarina baltica OS145]
Length = 127
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + + + G AL L +Q + F
Sbjct: 1 MDKNMKILVVDDFSTMRRIIKNLLRDLGFTNIQEADDGNTALPML----QQGDFDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGM G +LLK+I++ +PV+++++E QI + G YIVKP
Sbjct: 53 ---VVTDWNMPGMQGIDLLKEIRKDDDLAHLPVLMVTAEAKREQIIQAAQAGVNGYIVKP 109
>gi|357405184|ref|YP_004917108.1| response regulator rcp1 [Methylomicrobium alcaliphilum 20Z]
gi|351717849|emb|CCE23514.1| Response regulator rcp1 [Methylomicrobium alcaliphilum 20Z]
Length = 149
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 89 ECSKELHVLAVDDSYVDRKLIERLLQISS--CKVTAVESGTRALQYLGLDGEQSNVGFDA 146
E S+ +L V+D D L++ L+ + C + V G AL +L +G+ V +A
Sbjct: 4 ENSQPFDILLVEDEPADAHLVKSALKENKVYCHLHHVLDGRDALGFLRREGD---VYKNA 60
Query: 147 LKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
+ +LI+ D MP M G E L IK F +PVV++++ DV + + + GA YI
Sbjct: 61 PQPDLILLDLNMPRMNGREFLSVIKTDEHFSAIPVVVLTTSDVERDVVASYKLGAASYIT 120
Query: 207 KPVKLS 212
KPV ++
Sbjct: 121 KPVDMA 126
>gi|333378873|ref|ZP_08470600.1| hypothetical protein HMPREF9456_02195 [Dysgonomonas mossii DSM
22836]
gi|332885685|gb|EGK05931.1| hypothetical protein HMPREF9456_02195 [Dysgonomonas mossii DSM
22836]
Length = 120
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
+L +DD K+I + + E+ +A+Q+L EQ+++ +LII
Sbjct: 3 RILIIDDKEAIAKVIANYFR-EDYECIYFENPLKAIQWL----EQNSMP------DLIIL 51
Query: 155 DYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
D MP MTG E L IK++ +F+ +PVVI+SSED LE GAE++I+KP
Sbjct: 52 DLRMPFMTGEEFLAYIKKNELFKSIPVVILSSEDNSINRIRLLENGAEDFILKP 105
>gi|330502784|ref|YP_004379653.1| response regulator receiver protein [Pseudomonas mendocina NK-01]
gi|421503489|ref|ZP_15950437.1| response regulator receiver protein [Pseudomonas mendocina DLHK]
gi|328917070|gb|AEB57901.1| response regulator receiver protein [Pseudomonas mendocina NK-01]
gi|400345716|gb|EJO94078.1| response regulator receiver protein [Pseudomonas mendocina DLHK]
Length = 128
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ TA + GT AL L QS FD
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTSALPML-----QSG-SFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 52 --FLVTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 109
>gi|224372199|ref|YP_002606571.1| chemotaxis response regulator [Nautilia profundicola AmH]
gi|223588330|gb|ACM92066.1| chemotaxis response regulator [Nautilia profundicola AmH]
Length = 125
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLI-ERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I L ++ V G A + + Q+N + ++
Sbjct: 1 MKILVVDDSSTMRRIIVNTLARLGYKDVVQAADGVEAWEVM-----QANP-----DIGVV 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KKI+ ++++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPNMNGLELVKKIRAEEKYKDIPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>gi|168705522|ref|ZP_02737799.1| response regulator receiver protein [Gemmata obscuriglobus UQM
2246]
Length = 147
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ L VDDS V R ++ L++S + DG + FD K+++
Sbjct: 4 IRALVVDDSRVMRNMVMNALKMSRLATFEFTEAS--------DGADALTKFDPTKIDMCF 55
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE-GAEEYIVKPVKLS 212
D+ MP M G E +K+ + + +P+V+++SE + +I+ L + GA+ YI KP
Sbjct: 56 VDWNMPNMNGVEFVKRARATGTAFHIPMVMVTSEQTMAKIEEALNQAGADSYICKPFTPE 115
Query: 213 D 213
D
Sbjct: 116 D 116
>gi|424066303|ref|ZP_17803769.1| sensor y box protein/response regulator [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|408002450|gb|EKG42706.1| sensor y box protein/response regulator [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 705
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG AL + +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELALAMIKRQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKAEKGTANIPIIMLSALDDQSSRLSGLEAGAEEYLNKPV 110
>gi|424070949|ref|ZP_17808377.1| sensor y box protein/response regulator [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999691|gb|EKG40069.1| sensor y box protein/response regulator [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 705
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG AL + +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELALAMIKRQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKAKKGTANIPIIMLSALDDQSSRLSGLEAGAEEYLNKPV 110
>gi|422671488|ref|ZP_16730854.1| PAS:GGDEF protein [Pseudomonas syringae pv. aceris str. M302273]
gi|330969228|gb|EGH69294.1| PAS:GGDEF protein [Pseudomonas syringae pv. aceris str. M302273]
Length = 705
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
+L +DD R L+E LLQ + ESG AL + +LI+ D
Sbjct: 8 ILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELALAMIKRQAP-----------DLILLD 56
Query: 156 YTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
MPGM GYE+ ++K +P++++S+ D + S LE GAEEY+ KPV
Sbjct: 57 IMMPGMDGYEVASQLKAEKGTANIPIIMLSALDDQSSRLSGLEAGAEEYLNKPV 110
>gi|398885503|ref|ZP_10640413.1| PAS domain S-box [Pseudomonas sp. GM60]
gi|398192413|gb|EJM79568.1| PAS domain S-box [Pseudomonas sp. GM60]
Length = 1516
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L V+D+ ++R++ + LL +VT E G + + + NV FDA ++
Sbjct: 1180 LRLLVVEDNMLNRQVADELLTGEGAQVTLAEGGLEGVSRVMAE----NVSFDA-----VL 1230
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MP + G E ++I+ + F +P+V M++ T D+CL G E++ KP+ L
Sbjct: 1231 MDIQMPDIDGLEATRRIRSNPRFAALPIVAMTANASSTDRDACLAAGMNEHVGKPIDL 1288
>gi|359781383|ref|ZP_09284607.1| two-component response regulator CheY [Pseudomonas psychrotolerans
L19]
gi|359370447|gb|EHK71014.1| two-component response regulator CheY [Pseudomonas psychrotolerans
L19]
Length = 128
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ TA + G AL L + N F
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGNTALPML----QSGNFDF---- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++TD+ MPGMTG +LL++++ + + +PV+++++E QI + G Y+VKP
Sbjct: 53 ---LVTDWNMPGMTGIDLLRQVRADARLKTLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 109
>gi|408375669|ref|ZP_11173328.1| type IV pili response regulator PilG [Alcanivorax hongdengensis
A-11-3]
gi|407764461|gb|EKF72939.1| type IV pili response regulator PilG [Alcanivorax hongdengensis
A-11-3]
Length = 127
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++L V+ +DDS R+ E LL+ + C+V G AL + D+ + N+
Sbjct: 6 QDLKVMVIDDSKTIRRTAETLLKKAGCEVITATDGFDALAKIA----------DS-RPNI 54
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
I D MP + GY+ IK +S F+E PV+++SS+D L G++EY+ KP
Sbjct: 55 IFVDIMMPRLDGYQTCALIKNNSAFKETPVIMLSSKDGLFDKAKGRIVGSDEYLTKP 111
>gi|429116300|ref|ZP_19177218.1| Two-component sensor protein RcsC [Cronobacter sakazakii 701]
gi|449307510|ref|YP_007439866.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Cronobacter sakazakii SP291]
gi|426319429|emb|CCK03331.1| Two-component sensor protein RcsC [Cronobacter sakazakii 701]
gi|449097543|gb|AGE85577.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Cronobacter sakazakii SP291]
Length = 949
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 40 GAPTQRFP--FAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVL 97
G P +R P + +S+ H ILT + + P A +T AE ++++ +L
Sbjct: 772 GMPVERSPGVWMHSVAAPHEILTLLGRIYSINVDVPGSEPVLP--ASSTSAEQNEDMMIL 829
Query: 98 AVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV------NL 151
VDD ++R+L+ A + GT LG +N G DAL V ++
Sbjct: 830 VVDDHPINRRLL------------ADQLGT-----LGYQCRTANDGVDALNVLSKNHIDI 872
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+++D MP M GY L ++I+E + +PVV +++ + + CLE G + + KPV L
Sbjct: 873 VLSDVNMPNMDGYRLTQRIRELGM--TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 930
>gi|423723907|ref|ZP_17698056.1| hypothetical protein HMPREF1078_02043 [Parabacteroides merdae
CL09T00C40]
gi|409240714|gb|EKN33489.1| hypothetical protein HMPREF1078_02043 [Parabacteroides merdae
CL09T00C40]
Length = 1344
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYL---GLDGEQ 139
++ AE SK+ +L + +++ + LL + +V +L Y+ +G++
Sbjct: 1069 VLSKSAEISKKFDLLVEETQNKNKQTV--LLADDNQEVLQYLEQQLSLDYIVVKAFNGKE 1126
Query: 140 SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEE 199
+ + +++I+D MP M G EL K+IKE+ + +PV++++++ +++QI+ L+
Sbjct: 1127 ALAMIEESYPHIVISDIMMPEMNGLELCKRIKENQNYCHIPVILLTAKSMISQIEEGLDA 1186
Query: 200 GAEEYIVKPVKLS 212
GA++YIVKP ++S
Sbjct: 1187 GADDYIVKPFQIS 1199
>gi|399017875|ref|ZP_10720064.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
gi|398102642|gb|EJL92822.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
Length = 151
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQIS--SCKVTAVESGTRALQYL-GLDGEQSNVGFDAL 147
S+E+ +L V+D L+E+ L+ + S ++ G AL Y DG S GFD++
Sbjct: 4 SEEVGILLVEDDDGHALLVEKNLRRAGLSNGFLRLKDGQEALDYFFNADGAPSKPGFDSI 63
Query: 148 KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVK 207
+++ D MP + G ++LK++KE+ V +P++++++ D +I+ C + G YI K
Sbjct: 64 ---VVLLDVNMPRVNGVDVLKRLKENDVTATIPIIMLTTTDDPREIERCYDYGCNLYITK 120
Query: 208 PVK 210
PV+
Sbjct: 121 PVE 123
>gi|345865106|ref|ZP_08817298.1| chemotaxis protein CheY [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345877055|ref|ZP_08828812.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225891|gb|EGV52237.1| chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345123810|gb|EGW53698.1| chemotaxis protein CheY [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 128
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLLQ-ISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K + +L VDD R++I+ LL+ + + GT AL L N FD
Sbjct: 1 MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTHEADDGTTALPML------QNGNFD--- 51
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++D+ MPGMTG +LLK ++ + +PV+++++E QI + G Y+VKP
Sbjct: 52 --FLVSDWNMPGMTGIDLLKAVRADAKLAALPVLMVTAESKREQIIEAAQAGVNGYVVKP 109
>gi|410626121|ref|ZP_11336889.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola mesophila KMM 241]
gi|410154340|dbj|GAC23658.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola mesophila KMM 241]
Length = 1172
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L V+D++++++++ +L+ C V E+G A+ L E+S V FDA I+
Sbjct: 1050 HILLVEDNFINQQVVIEMLKKLQCSVQVAENGQEAIHTL----EESEVKFDA-----ILM 1100
Query: 155 DYTMPGMTGYELLKKIKESSVFR---EVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
D MP M GYE + I++S +P++ +++ + ++CL G Y+ KP+ L
Sbjct: 1101 DCQMPIMDGYEASRTIRKSQHINYTSTLPIIALTANAMKGDKEACLAAGMNAYLTKPIVL 1160
Query: 212 SD 213
++
Sbjct: 1161 AE 1162
>gi|406864097|gb|EKD17143.1| hsp90-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1183
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
HVL V+D+ V++K++ R LQ C V+ G AL +L F +++++++
Sbjct: 1036 HVLVVEDNIVNQKVLSRQLQSVGCLVSVANHGKEALSFLEKSRFWKGNEFRGIELSVVLM 1095
Query: 155 DYTMPGMTGYELLKKI----KESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP M G +K I KE + VPV+ +++ QI + E G + + KP +
Sbjct: 1096 DLEMPVMDGLTCVKHIRQLQKEGLIVGHVPVIAVTANARSEQISTAKESGMDSVVTKPFR 1155
Query: 211 LSD 213
+ D
Sbjct: 1156 IPD 1158
>gi|359434788|ref|ZP_09225034.1| sensor protein [Pseudoalteromonas sp. BSi20652]
gi|357918534|dbj|GAA61283.1| sensor protein [Pseudoalteromonas sp. BSi20652]
Length = 679
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 95 HVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIIT 154
H+L VDD+ ++ ++ + +L+ + K+T G AL+ L L+ EQ+ FD +I+
Sbjct: 556 HLLLVDDNMINIEVAKAILKRTKVKITCASDGIEALEALRLNEEQA---FD-----IILM 607
Query: 155 DYTMPGMTGYELLKKIKESSV---FREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
D MP + GY+ +I+ S + +P++ M++ + + CL G +YI KP+K
Sbjct: 608 DCQMPNLNGYDTTSEIRNSKAGVDYTYIPIIAMTASAMEGDRERCLTAGMNDYITKPIK 666
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
+ ++ +L VDD+ + K++ +LQ + + SG AL+ + N+ F N
Sbjct: 4 NSQIKILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALEMV------KNIRF-----N 52
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
LI+ D MP M GYE+++K+K R++P++ +++ + +EGA +Y++KP
Sbjct: 53 LILLDVMMPEMDGYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYLIKP 110
>gi|443479083|ref|ZP_21068740.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
gi|443015498|gb|ELS30420.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
Length = 240
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ VL VDD+ ++R ++ R L +++ +G A++ Q N+ +L
Sbjct: 4 QNFQVLIVDDNEINRDMLARRLHRRDFQISMAVNGREAIEM-----AQKNL------YDL 52
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++ D MP + GY +L +K+ S R++PV+++S+ + + + C+E GA++Y+ KP
Sbjct: 53 VLLDIMMPELDGYAVLTYLKKDSRLRDIPVIMISAIEEMGSVMKCMEIGADDYLTKP 109
>gi|443315490|ref|ZP_21044978.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442784916|gb|ELR94768.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 1118
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 83 AMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNV 142
A+ + ++ VL VDD ++R+++ L + + +T +G AL+ + +
Sbjct: 699 ALPIPSSNGAQIKVLIVDDEPINRQVLINNLSLYNYAITEASNGQEALKII-------DE 751
Query: 143 GFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAE 202
GF +LI+ D MP MTGYE+ KKI++ E+P+V++++++ + I E GA
Sbjct: 752 GF---LPDLILLDVMMPRMTGYEVCKKIRDRFPSYELPIVMLTAKNQVADIVEGFESGAN 808
Query: 203 EYIVKPVK 210
+Y+ KP++
Sbjct: 809 DYLCKPIQ 816
>gi|303326429|ref|ZP_07356872.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345892164|ref|ZP_08842988.1| hypothetical protein HMPREF1022_01648 [Desulfovibrio sp.
6_1_46AFAA]
gi|302864345|gb|EFL87276.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345047575|gb|EGW51439.1| hypothetical protein HMPREF1022_01648 [Desulfovibrio sp.
6_1_46AFAA]
Length = 126
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ VL VDD R+++ +L Q+ V + GT A + L + KV I
Sbjct: 7 MRVLVVDDFSTMRRIVRNILRQLGFNNVVEADDGTTAWEVLNRE-----------KVEFI 55
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
++D+ MP MTG +LL+K++ S F ++P +++++E I ++ YIVKP
Sbjct: 56 VSDWNMPQMTGIDLLRKVRASEQFADIPFLMVTAEAQQENIIEAVQAKVSNYIVKP 111
>gi|194292537|ref|YP_002008444.1| two-component sensor response receiver component, histidine kinase
[Cupriavidus taiwanensis LMG 19424]
gi|193226441|emb|CAQ72390.1| two-component sensor response receiver component, histidine kinase
[Cupriavidus taiwanensis LMG 19424]
Length = 1122
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L +L VDD +R L+E+ L C+ T +SG AL + + +L++
Sbjct: 876 LEILVVDDHPYNRLLMEQQLDRLGCRATLADSGEAALAL-----------WPQRRFDLVL 924
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
TD MPGM G EL ++++ V VP+V +++ + + C+E G + Y+ KPV L
Sbjct: 925 TDVHMPGMDGNELCRRLRARGV--TVPIVGLTASIAQGEAERCIEAGMDRYLSKPVLL 980
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL V+ R+++ LL+ +V E+G +A YL QSN+ +L
Sbjct: 30 KTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQSNI-------DL 80
Query: 152 IITDYTM-PGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ M G++G +LL +I V +++PV++MSS D + + SCL GA +++ KP++
Sbjct: 81 VLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIR 140
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,126,043,805
Number of Sequences: 23463169
Number of extensions: 117964914
Number of successful extensions: 440258
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19616
Number of HSP's successfully gapped in prelim test: 59453
Number of HSP's that attempted gapping in prelim test: 374127
Number of HSP's gapped (non-prelim): 84090
length of query: 213
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 77
effective length of database: 9,168,204,383
effective search space: 705951737491
effective search space used: 705951737491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)