BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048660
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6 OS=Arabidopsis thaliana
GN=ARR6 PE=1 SV=2
Length = 186
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 111/120 (92%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
LHVLAVDDS+VDRK IERLL++SSCKVT V+S TRALQYLGLD E+ +VGF+ LKVNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
TDY+MPGMTGYELLKKIKESS FREVPVVIMSSE++L +ID CLEEGAE++++KPVKLSD
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
>sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 OS=Arabidopsis thaliana
GN=ARR5 PE=1 SV=2
Length = 184
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 112/123 (91%), Gaps = 1/123 (0%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-SNVGFDALKVN 150
K LHVLAVDDS VDRK IERLL++SSCKVT V+S TRALQYLGLDGE S+VGF+ LK+N
Sbjct: 23 KLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKIN 82
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAE++++KPVK
Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142
Query: 211 LSD 213
L+D
Sbjct: 143 LAD 145
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 108/121 (89%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS+VDRK+IERLL+IS+CKVT VESGTRALQYLGLDG+ + G LKVNLI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPG+TGYELLKKIKESS RE+PVVIMSSE++ +I+ C+ EGAEE+++KPVKL+
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLA 136
Query: 213 D 213
D
Sbjct: 137 D 137
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 107/121 (88%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
ELHVLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGLDG + LKVNLI
Sbjct: 23 ELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLI 82
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+TDY+MPG++GY+LLKKIKESS FREVPVVIMSSE++L +I CL+EGAEE+++KPVKL+
Sbjct: 83 VTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLA 142
Query: 213 D 213
D
Sbjct: 143 D 143
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 111/121 (91%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
E+HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD E+++ FD LKV+LI
Sbjct: 33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 92
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGMTGYELLKKIKESS FREVPVVIMSSE+VLT+ID CLEEGA+++++KPVKL+
Sbjct: 93 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152
Query: 213 D 213
D
Sbjct: 153 D 153
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 190 bits (482), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 112/123 (91%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVN 150
S ++HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD +++ V FD LKV+
Sbjct: 30 SDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVD 89
Query: 151 LIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
LIITDY MPGMTGYELLKKIKES+ F+EVPVVIMSSE+V+T+ID CLEEGAE++++KPVK
Sbjct: 90 LIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVK 149
Query: 211 LSD 213
L+D
Sbjct: 150 LAD 152
>sp|Q9FPR6|ARR17_ARATH Two-component response regulator ARR17 OS=Arabidopsis thaliana
GN=ARR17 PE=2 SV=1
Length = 153
Score = 167 bits (423), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Query: 76 NRGFPFWAMATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL 135
N+G + + ++ +ELHVLAVDD+ +DRKL+ER+L+ISSCKVT E+G RAL+YLGL
Sbjct: 2 NKGCGSGSDSCLSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL 61
Query: 136 -DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQID 194
D +Q++ + +KVNLIITDY MPGMTG+ELLKK+KESS +EVPVVI+SSE++ T+I+
Sbjct: 62 GDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRIN 121
Query: 195 SCLEEGAEEYIVKPVKLSD 213
CL GA+ ++ KP+KLSD
Sbjct: 122 KCLASGAQMFMQKPLKLSD 140
>sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana
GN=ARR9 PE=1 SV=1
Length = 234
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 104/140 (74%), Gaps = 12/140 (8%)
Query: 84 MATVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL----DGEQ 139
M AE + HVLAVDDS DRKLIERLLQ SSC+VT V+SG++AL++LGL D
Sbjct: 1 MGMAAES--QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSND 58
Query: 140 SN------VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQI 193
N V ++VNLIITDY MPGMTGY+LLKK+KESS FR++PVVIMSSE+V +I
Sbjct: 59 PNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARI 118
Query: 194 DSCLEEGAEEYIVKPVKLSD 213
CLEEGAEE+ +KPV+L+D
Sbjct: 119 SRCLEEGAEEFFLKPVRLAD 138
>sp|O80365|ARR8_ARATH Two-component response regulator ARR8 OS=Arabidopsis thaliana
GN=ARR8 PE=1 SV=1
Length = 225
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 102/135 (75%), Gaps = 8/135 (5%)
Query: 87 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG--- 143
V E + HVLAVDDS DRK+IERLLQ SSC+VT V+SG++AL++LGL + ++
Sbjct: 2 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61
Query: 144 -----FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLE 198
+++NLIITDY MPGMTGY+LLKK+KES+ FR +PVVIMSSE+V +I CLE
Sbjct: 62 TSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLE 121
Query: 199 EGAEEYIVKPVKLSD 213
EGAEE+ +KPVKL+D
Sbjct: 122 EGAEEFFLKPVKLAD 136
>sp|Q9SHC2|ARR16_ARATH Two-component response regulator ARR16 OS=Arabidopsis thaliana
GN=ARR16 PE=1 SV=1
Length = 164
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 102/127 (80%), Gaps = 7/127 (5%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDAL---- 147
+ELHVLAVDD+ +DRKL+ERLL+IS CKVT E+ RAL+YLGL G+Q N DAL
Sbjct: 27 EELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL-GDQ-NQHIDALTCNV 84
Query: 148 -KVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIV 206
KV+LIITDY MPGMTG+ELLKK+KESS REVPVVIMSSE++ T+I+ CL GA+ ++
Sbjct: 85 MKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQ 144
Query: 207 KPVKLSD 213
KP+KL+D
Sbjct: 145 KPLKLAD 151
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL VD R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 60 KTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNS--------IDL 110
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 111 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
K + VL VD R+++ LL+ +V E+G +A YL D + S ++L
Sbjct: 60 KTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE-DMQNS--------IDL 110
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MPG++G LL +I ++ + +PV++MSS D + + CL +GA +++VKP++
Sbjct: 111 VLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIR 169
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 9/120 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ R++I LL+ S +V AV G +A + L E V+LI+
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPE---------SVDLIL 100
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
T+ +P ++GY LL I E + + +PV++MS++D + + C+ +GA +Y+VKP++ ++
Sbjct: 101 TEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNE 160
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+++V+ VDD +V ++ R+LQ S +V AV+ +AL L + + ++LI
Sbjct: 15 KINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRD---------NIDLI 65
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
ITDY MPGM G +L K+I + F +PV++MSS+ + + L GA +I KP+ +
Sbjct: 66 ITDYYMPGMNGLQLKKQITQE--FGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPT 121
Query: 213 D 213
D
Sbjct: 122 D 122
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++ +L DD V RK++ LL+ VT V +G A +Y+ G+Q K +L+
Sbjct: 159 KVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYIN-KGQQ--------KYDLV 209
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDV-LTQIDSCLEEGAEEYIVKPV 209
+TD MP +TG++LL++I + V R +PV++MS V + ++ G ++++ KP+
Sbjct: 210 LTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 267
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL V+ Y R++I LL+ KV AV G A + L E+S+ ++LI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLK---EKSH------NIDLIL 87
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
T+ +P ++G+ LL + E + +PV++MSS+D + + C+ GA +Y++KP++
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMR 144
>sp|P0A2D5|CHEY_SALTY Chemotaxis protein CheY OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=cheY PE=1 SV=2
Length = 129
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
II+D+ MP M G ELLK I+ S +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---IISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|P0A2D6|CHEY_SALTI Chemotaxis protein CheY OS=Salmonella typhi GN=cheY PE=3 SV=2
Length = 129
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
II+D+ MP M G ELLK I+ S +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---IISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|P71403|CHEY_HELPY Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=cheY PE=1 SV=2
Length = 124
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ S F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>sp|Q9ZM64|CHEY_HELPJ Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain J99)
GN=cheY PE=3 SV=1
Length = 124
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A + L + + ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTK----------VL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G +L+KK++ + F+E+P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK--V 149
K L VL V++ R+++ LL+ +V E+G A Q L + L+ +
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----------EDLQNHI 127
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP+
Sbjct: 128 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 187
Query: 210 K 210
+
Sbjct: 188 R 188
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK--V 149
K L VL V++ R+++ LL+ +V E+G A Q L + L+ +
Sbjct: 79 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL-----------EDLQNHI 127
Query: 150 NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+L++T+ MP ++G LL KI + +++PV++MSS D + + CL +GA +++VKP+
Sbjct: 128 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 187
Query: 210 K 210
+
Sbjct: 188 R 188
>sp|P0AE69|CHEY_SHIFL Chemotaxis protein CheY OS=Shigella flexneri GN=cheY PE=3 SV=2
Length = 129
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGYGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|P0AE67|CHEY_ECOLI Chemotaxis protein CheY OS=Escherichia coli (strain K12) GN=cheY
PE=1 SV=2
Length = 129
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGYGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|P0AE68|CHEY_ECO57 Chemotaxis protein CheY OS=Escherichia coli O157:H7 GN=cheY PE=3
SV=2
Length = 129
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGYGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|Q9FAD7|CHEY_ENTCL Chemotaxis protein CheY OS=Enterobacter cloacae GN=cheY PE=3 SV=3
Length = 129
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL----QAGGFGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ + +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|Q8FGP6|CHEY_ECOL6 Chemotaxis protein CheY OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=cheY PE=3 SV=3
Length = 129
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
KEL L VDD R+++ LL ++ V E G AL L + GF
Sbjct: 2 ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKL----QAGGYGF---- 53
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+I+D+ MP M G ELLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 54 ---VISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KV V + L + + +DA
Sbjct: 460 RSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEED------YDA----- 508
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 509 VIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 62.0 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + +L DD +R +++RLL+ + KV V + L + + +DA
Sbjct: 460 RSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEED------YDA----- 508
Query: 152 IITDYTMPGMTGYELLKKIK--ESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPV 209
+I D MPGM G ++LK+++ ++S R PVV++S++ I +C + GA ++ KPV
Sbjct: 509 VIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>sp|Q51455|CHEY_PSEAE Chemotaxis protein CheY OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cheY PE=1
SV=1
Length = 124
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTA-VESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDD R++I+ LL+ TA + GT AL L N F +
Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPML----HSGNFDF-------L 49
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+TD+ MPGMTG +LL+ ++ + +PV+++++E QI + G Y+VKP
Sbjct: 50 VTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 105
>sp|Q93P00|CHEY_YEREN Chemotaxis protein CheY OS=Yersinia enterocolitica GN=cheY PE=3
SV=3
Length = 129
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K L L VDD R+++ LL ++ V E G AL L GFD
Sbjct: 2 ADKNLRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL------RTGGFD--- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++D+ MP M G +LLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 53 --FVVSDWNMPNMDGLDLLKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 100 DDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMP 159
DDS R +I LL+ +V A G +A L E+S ++L++T+ +P
Sbjct: 51 DDST--RHIICALLRKCGYRVAAASDGVKAWDILK---EKS------FNIDLVLTEVELP 99
Query: 160 GMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
M+G+ LL I E + +PV++MSS D ++ + C+ +GA +++VKP++
Sbjct: 100 LMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIR 150
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 96 VLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITD 155
VL VDD++++ +++ ++LQ C+V +V SG AL + + S +DA I D
Sbjct: 1571 VLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKI---NQSSGDSYDA-----IFLD 1622
Query: 156 YTMPGMTGYELLKKIKESSVFREVP--VVIMSSEDVLTQID-SCLEEGAEEYIVKPVK 210
MP M G+++ +KI+E +P +I ++ +V + C + G +++I KP+K
Sbjct: 1623 IQMPDMDGFQVSRKIREREKKFSLPRVAIIATTANVFKEDQLKCFDAGMDDFISKPIK 1680
>sp|A1W0A5|CHEY_CAMJJ Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:23/36 (strain 81-176) GN=cheY PE=3
SV=1
Length = 130
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A L + + V ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|P0C635|CHEY_CAMJE Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:2 (strain NCTC 11168) GN=cheY PE=3
SV=1
Length = 130
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A L + + V ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|A8FMH1|CHEY_CAMJ8 Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=cheY
PE=3 SV=1
Length = 130
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 94 LHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
+ +L VDDS R++I+ L ++ V E G A L + + V ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVL 50
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
ITD+ MP M G EL+KK++ + ++P++++++E ++ + L+ G YIVKP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|Q8D0P1|CHEY_YERPE Chemotaxis protein CheY OS=Yersinia pestis GN=cheY PE=3 SV=3
Length = 129
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 90 CSKELHVLAVDDSYVDRKLIERLL-QISSCKVTAVESGTRALQYLGLDGEQSNVGFDALK 148
K L L VDD R+++ LL ++ V E G AL L GFD
Sbjct: 2 ADKNLRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKL------RAGGFD--- 52
Query: 149 VNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKP 208
+++D+ MP M G +LLK I+ +PV+++++E I + + GA Y+VKP
Sbjct: 53 --FVVSDWNMPNMDGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ L VL V++ R ++ LL+ S +VTAV A + L + E+S + +L
Sbjct: 62 RSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL--EDEKSCI-------DL 112
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP +G LL KI + +PV++MSS D + + CL GA +++VKP++
Sbjct: 113 VLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 171
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL VDD ++ER+L +VT AL L ++ GFD ++I
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLL----RKNKNGFD-----IVI 78
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+D MP M G++LL+ + + ++PV++MS++D + + + GA +Y++KPV++
Sbjct: 79 SDVHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRI 133
>sp|P46384|PILG_PSEAE Protein PilG OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 /
1C / PRS 101 / LMG 12228) GN=pilG PE=3 SV=1
Length = 135
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 91 SKELHVLAVDDSYVDRKLIERLLQISSCKV-TAVESGTRALQYLGLDGEQSNVGFDAL-K 148
S L V+ +DDS R+ E LL+ C V TA++ GFDAL K
Sbjct: 5 SDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAID------------------GFDALAK 46
Query: 149 V-----NLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEE 203
+ N+I D MP + GY+ IK +S F+ PV+++SS+D L G+++
Sbjct: 47 IADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQ 106
Query: 204 YIVKP 208
Y+ KP
Sbjct: 107 YLTKP 111
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
+ + VL V++ R ++ LL+ S +V +G +A + L E N D +
Sbjct: 76 RTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL----EDLNNHID-----I 126
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVK 210
++T+ MP ++G LL KI R +PV++MSS D + + CL +GA +++VKP++
Sbjct: 127 VLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIR 185
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 12/118 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL VDD ++ER+L+ +VT AL L ++ GFD ++I
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL----RKNKHGFD-----IVI 87
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+D MP M G++LL+ + + ++PV++MS++D + + + GA +Y++KPV++
Sbjct: 88 SDVHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRM 142
>sp|Q9TLQ4|YCF27_CYACA Probable transcriptional regulator ycf27 OS=Cyanidium caldarium
GN=ycf27 PE=3 SV=1
Length = 249
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 68/118 (57%), Gaps = 16/118 (13%)
Query: 92 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNL 151
++ H+L VDD RK+++ L + V+ +G AL+ F ++L
Sbjct: 10 RQHHLLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKI-----------FTTHSIDL 58
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSS-EDVLTQIDSCLEEGAEEYIVKP 208
II D MP + GY + ++I++ S ++P++++++ EDVL ++ + LE GA++Y++KP
Sbjct: 59 IILDVMMPKLDGYGVCQEIRKES---DIPIIMLTALEDVLDKV-TGLELGADDYVIKP 112
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
L VL VDD K++E++L+ S +VT AL+ L + G+D ++I
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL----RERKDGYD-----IVI 61
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSD 213
+D MP M G++LL+ + + ++PV++MS + +++ ++ GA +Y++KP+++ +
Sbjct: 62 SDVNMPDMDGFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKE 118
>sp|P18769|FRZE_MYXXA Gliding motility regulatory protein OS=Myxococcus xanthus GN=frzE
PE=1 SV=1
Length = 777
Score = 55.1 bits (131), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 86 TVAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFD 145
T A +K L VL VDDS + R L++ V + DGE++ V
Sbjct: 651 TQAPAAKRLRVLLVDDSPIARATEGALVKALGHSVEEAQ-----------DGEEAYVKVQ 699
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
+LI+TD MP + G+ L +++K + +PV+I+SS L+ GA+ Y+
Sbjct: 700 NNTYDLILTDVQMPKLDGFSLARRLKSTPAVARIPVIILSSLASPEDKRRGLDAGADAYL 759
Query: 206 VK 207
VK
Sbjct: 760 VK 761
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 24/128 (18%)
Query: 101 DSYVDRKLIERLL-------------QISSC--KVTAVESGTRALQYLGLDGEQSNVGFD 145
D ++DR + LL +S C +VTAV+S + + L +G
Sbjct: 11 DGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPD------ 64
Query: 146 ALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYI 205
+++I+ + +P G ++L+ I R +PV++MS +D + + CL+ GA +Y+
Sbjct: 65 ---IDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYL 121
Query: 206 VKPVKLSD 213
VKP++ ++
Sbjct: 122 VKPLRTNE 129
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 93 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLI 152
++ +L D + + RLL S +VT +S + + L + A ++++I
Sbjct: 27 KVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCE---------AGEIDII 77
Query: 153 ITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLS 212
+ + +P +++LK I + R +P+++MS+ D ++ + CL GA EY+VKP++++
Sbjct: 78 LAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMN 137
Query: 213 D 213
+
Sbjct: 138 E 138
>sp|Q56128|RCSC_SALTI Sensor protein RcsC OS=Salmonella typhi GN=rcsC PE=3 SV=2
Length = 948
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 40 GAPTQRFP--FAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVL 97
G P +R P + +S+ H + + E + + P A+ + ++ +L
Sbjct: 771 GIPLERAPGEWVHSVASVHELPALLARIYSIELDSEALSSALP--TTDKTADSNDDMMIL 828
Query: 98 AVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV------NL 151
VDD ++R+L+ L LG + +N G DAL V ++
Sbjct: 829 VVDDHPINRRLL-----------------ADQLGSLGYQCKTANDGVDALNVLSKNAIDI 871
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+++D MP M GY L ++I++ + +PVV +++ + + CLE G + + KPV L
Sbjct: 872 VLSDVNMPNMDGYRLTQRIRQLGL--TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>sp|P58662|RCSC_SALTY Sensor protein RcsC OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=rcsC PE=3 SV=1
Length = 948
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 40 GAPTQRFP--FAYSLTQTHNILTKTHQRLVKEKKFKETNRGFPFWAMATVAECSKELHVL 97
G P +R P + +S+ H + + E + + P A+ + ++ +L
Sbjct: 771 GIPLERAPGEWVHSVASVHELPALLARIYSIELDSEALSSALP--TTDKTADSNDDMMIL 828
Query: 98 AVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKV------NL 151
VDD ++R+L+ L LG + +N G DAL V ++
Sbjct: 829 VVDDHPINRRLL-----------------ADQLGSLGYQCKTANDGVDALNVLSKNAIDI 871
Query: 152 IITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+++D MP M GY L ++I++ + +PVV +++ + + CLE G + + KPV L
Sbjct: 872 VLSDVNMPNMDGYRLTQRIRQLGL--TLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 12/118 (10%)
Query: 94 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLII 153
+ VLAVDD K++E LL+ VT +AL+ L E N K +L+I
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELL---RENKN------KFDLVI 67
Query: 154 TDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKL 211
+D MP M G++LL+ + + ++PV+++S+ + + GA +Y++KPV++
Sbjct: 68 SDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRI 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,306,448
Number of Sequences: 539616
Number of extensions: 2898015
Number of successful extensions: 8560
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 461
Number of HSP's that attempted gapping in prelim test: 8138
Number of HSP's gapped (non-prelim): 603
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)