Query 048662
Match_columns 214
No_of_seqs 205 out of 479
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 20:38:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o98_P H-ATPase PMA2, plasma m 99.7 1.2E-18 3.9E-23 119.8 3.6 51 164-214 2-52 (52)
2 3b8c_A ATPase 2, plasma membra 99.7 6.9E-20 2.4E-24 183.2 -9.3 130 18-147 752-881 (885)
3 3m50_P N.plumbaginifolia H+-tr 99.6 5.8E-17 2E-21 100.2 1.7 30 185-214 2-31 (31)
4 1mhs_A Proton pump, plasma mem 99.1 1.3E-10 4.4E-15 117.0 6.6 107 17-129 791-897 (920)
5 2zxe_A Na, K-ATPase alpha subu 97.8 1.6E-05 5.3E-10 80.6 5.3 92 18-109 922-1016(1028)
6 3ar4_A Sarcoplasmic/endoplasmi 97.3 0.00041 1.4E-08 69.9 7.5 92 18-109 896-991 (995)
7 3ixz_A Potassium-transporting 97.0 0.0021 7.3E-08 65.1 9.6 91 19-109 928-1022(1034)
8 3rlf_F Maltose transport syste 24.2 1.3E+02 0.0044 28.1 6.2 78 42-131 7-96 (514)
9 3zwh_Q Myosin-9; Ca-binding pr 17.7 53 0.0018 21.3 1.5 23 171-194 7-29 (45)
10 4ev6_A Magnesium transport pro 15.8 2.4E+02 0.0082 24.2 5.7 11 75-85 303-313 (339)
No 1
>2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia}
Probab=99.73 E-value=1.2e-18 Score=119.82 Aligned_cols=51 Identities=67% Similarity=1.019 Sum_probs=49.7
Q ss_pred ccchhhhhHHHHHhhhhHHhhhhhhhcchhhhHhhhhcCCChhhhcccccC
Q 048662 164 SYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214 (214)
Q Consensus 164 ~~~~~~~~~~~a~rr~~~a~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 214 (214)
+|.++++++|+|++|+|++||||+||||||+||++|+||+|++.++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 578999999999999999999999999999999999999999999999997
No 2
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=99.69 E-value=6.9e-20 Score=183.16 Aligned_cols=130 Identities=59% Similarity=1.040 Sum_probs=87.2
Q ss_pred chHHHHHHHHHHhhhhheeeeecCCCCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHH
Q 048662 18 KLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFY 97 (214)
Q Consensus 18 ~lqT~~FLqlsis~qa~IFvtRtrg~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~~ 97 (214)
+.+|.+|+.+++.+|+.+|++|++++||.++|+.++++++++.+++++++++|+.+.|+.+.|++|.+.+++|+++++++
T Consensus 752 ~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (885)
T 3b8c_A 752 ELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTY 831 (885)
T ss_dssp HHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999877777799999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhccccccccccChhHHHHHHHHhhhh
Q 048662 98 ILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHERRWAQEQRT 147 (214)
Q Consensus 98 l~lD~iK~~ir~~l~~~~~~~~~~~k~a~t~~~~~g~~~~~~~~a~~~~~ 147 (214)
++.|+.|++.|+.+++.+|++++++|++|+++||||+++|+++|+.+...
T Consensus 832 ~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (885)
T 3b8c_A 832 FPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHH 881 (885)
T ss_dssp HHHHHHHHHHTTC-------------------------------------
T ss_pred HHHHHHHHHHHHhhhhccHhhhhccccccccchhcccccccccccccccc
Confidence 99999999999999999999999999999999999999999999987644
No 3
>3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P*
Probab=99.63 E-value=5.8e-17 Score=100.17 Aligned_cols=30 Identities=67% Similarity=1.120 Sum_probs=29.5
Q ss_pred hhhhhcchhhhHhhhhcCCChhhhcccccC
Q 048662 185 RELHTLKGQVESLIRLKGLDIDSILQSYSV 214 (214)
Q Consensus 185 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 214 (214)
||+||||||||||+||||+|+|+|||||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 899999999999999999999999999998
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=99.06 E-value=1.3e-10 Score=117.02 Aligned_cols=107 Identities=13% Similarity=0.243 Sum_probs=93.2
Q ss_pred cchHHHHHHHHHHhhhhheeeeecCCCCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHH
Q 048662 17 RKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIF 96 (214)
Q Consensus 17 ~~lqT~~FLqlsis~qa~IFvtRtrg~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~ 96 (214)
++.+|++|+.+++++.+.+|++|++++||.++|++++++++++.++++++++++| ++...|++|.+.+.+|++++++
T Consensus 791 ~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~f~~~~l~~~~~~~~~~~~~~~ 867 (920)
T 1mhs_A 791 GNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIWIFSFGI 867 (920)
T ss_dssp SSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS---STTSCSHHHHTHHHHHHHTTHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh---hhccCCCCHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999999999999999999999999999887 4567899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhccccccc
Q 048662 97 YILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTK 129 (214)
Q Consensus 97 ~l~lD~iK~~ir~~l~~~~~~~~~~~k~a~t~~ 129 (214)
+++.|+.|++++. .+.|+++.++|.+..++
T Consensus 868 ~~~~e~~k~~~~~---~~~fd~~~~~~~~~~~~ 897 (920)
T 1mhs_A 868 FCIMGGVYYILQD---SVGFDNLMHGKSPKGNQ 897 (920)
T ss_dssp HHHHHHHHHCCCC---CCTTHHHHHHHSTTTHH
T ss_pred HHHHHHHHHHHhh---hHHHHHHhccCcccccc
Confidence 9999999973222 36888888877654333
No 5
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=97.80 E-value=1.6e-05 Score=80.61 Aligned_cols=92 Identities=12% Similarity=0.215 Sum_probs=76.2
Q ss_pred chHHHHHHHHHHhhhhheeeeecCCC-Ccc-cCChHHHHHHHHHHHHHHHHHHHHhc-ccccccccCchHHHHHHHHHHH
Q 048662 18 KLASAVYLQVSSISQAHLFVTHARSW-SYV-KCPVLFLALAFCVAQLTATLIAVYAT-WSFATIEGIGWGWAGVIWLYNI 94 (214)
Q Consensus 18 ~lqT~~FLqlsis~qa~IFvtRtrg~-fw~-srPs~~Ll~A~l~a~liaTliAv~g~-~~~~~m~~Igw~~~~~Iwly~i 94 (214)
+.||++|+.+++++.+.+|++|+++. +|. ..|+++|++++++..++..++.+.|. ..++++.|++|.+.++++++++
T Consensus 922 ~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A 922 TCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHH
Confidence 57999999999999999999999864 343 46899999999999999998888763 3567899999988888888888
Q ss_pred HHHHHHHHHHHHHHH
Q 048662 95 IFYILLDFIKFFIRY 109 (214)
Q Consensus 95 v~~l~lD~iK~~ir~ 109 (214)
+.+++.++.|++.|.
T Consensus 1002 ~~~~~~e~~k~~~r~ 1016 (1028)
T 2zxe_A 1002 IIFLYDEMRRFIIRR 1016 (1028)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 887777888876653
No 6
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=97.28 E-value=0.00041 Score=69.85 Aligned_cols=92 Identities=10% Similarity=0.047 Sum_probs=72.4
Q ss_pred chHHHHHHHHHHhhhhheeeeecCC-CCccc--CChHHHHHHHHHHHHHHHHHHHHhc-ccccccccCchHHHHHHHHHH
Q 048662 18 KLASAVYLQVSSISQAHLFVTHARS-WSYVK--CPVLFLALAFCVAQLTATLIAVYAT-WSFATIEGIGWGWAGVIWLYN 93 (214)
Q Consensus 18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw~s--rPs~~Ll~A~l~a~liaTliAv~g~-~~~~~m~~Igw~~~~~Iwly~ 93 (214)
+.+|+.|..+++.+.+..|.+|++. ..|.. .++++|++++++..++..++.+.+. ..++++.|++|...+++++++
T Consensus 896 ~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~ 975 (995)
T 3ar4_A 896 EPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKIS 975 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 4689999999999999999999864 33332 3578888888888888777777653 245678999998778888888
Q ss_pred HHHHHHHHHHHHHHHH
Q 048662 94 IIFYILLDFIKFFIRY 109 (214)
Q Consensus 94 iv~~l~lD~iK~~ir~ 109 (214)
++++++.++.|++.|.
T Consensus 976 ~~~~~~~e~~k~~~r~ 991 (995)
T 3ar4_A 976 LPVIGLDEILKFIARN 991 (995)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc
Confidence 8888888888876553
No 7
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=97.02 E-value=0.0021 Score=65.08 Aligned_cols=91 Identities=10% Similarity=0.211 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHhhhhheeeeecCC-CCcccC--ChHHHHHHHHHHHHHHHHHHHHhcc-cccccccCchHHHHHHHHHHH
Q 048662 19 LASAVYLQVSSISQAHLFVTHARS-WSYVKC--PVLFLALAFCVAQLTATLIAVYATW-SFATIEGIGWGWAGVIWLYNI 94 (214)
Q Consensus 19 lqT~~FLqlsis~qa~IFvtRtrg-~fw~sr--Ps~~Ll~A~l~a~liaTliAv~g~~-~~~~m~~Igw~~~~~Iwly~i 94 (214)
.+|+.|..+++.+.+.+|+.|+++ ..|... ..++|++++++..++..++.+.+.. .+++..|++|.+.+++.++++
T Consensus 928 ~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1007 (1034)
T 3ixz_A 928 CYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGL 1007 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHH
Confidence 689999999999999999999975 456532 5678888888888887777766632 456889999998888888888
Q ss_pred HHHHHHHHHHHHHHH
Q 048662 95 IFYILLDFIKFFIRY 109 (214)
Q Consensus 95 v~~l~lD~iK~~ir~ 109 (214)
+.+++.++.|.+.|.
T Consensus 1008 ~~~~~~e~~K~~~r~ 1022 (1034)
T 3ixz_A 1008 LIFVYDEIRKLGVRC 1022 (1034)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888887664
No 8
>3rlf_F Maltose transport system permease protein MALF; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 2r6g_F* 3puv_F* 3pux_F* 3puy_F* 3puz_F* 3pv0_F* 3puw_F* 3fh6_F
Probab=24.20 E-value=1.3e+02 Score=28.06 Aligned_cols=78 Identities=14% Similarity=0.038 Sum_probs=44.3
Q ss_pred CCCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHHHHHH---HH--HHHHHhhhhhh
Q 048662 42 SWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFI---KF--FIRYVLSRNFW 116 (214)
Q Consensus 42 g~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~~l~lD~i---K~--~ir~~l~~~~~ 116 (214)
+.+|+++--++.+.+.+.+..+-.++..|+.+ .|..+++..+.. ...|.+ |. ..||+.+|-..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~y~~p~~~~ 74 (514)
T 3rlf_F 7 KHWWQSDALKWSVLGLLGLLVGYLVVLMYAQG--------EYLFAITTLILS----SAGLYIFANRKAYAWRYVYPGMAG 74 (514)
T ss_dssp ---CCCSHHHHHHHHHHHHHHHHTHHHHHTTT--------CHHHHHHHHHHH----HHHHHHHHCGGGCTHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHCc--------cHHHHHHHHHHH----HHHeEEEECCCcccHHHHHHHHHH
Confidence 34588777777777777777766666666532 343333322221 122222 33 78999988665
Q ss_pred hhhhh-------hccccccccc
Q 048662 117 DLVIE-------QRTAFTTKRD 131 (214)
Q Consensus 117 ~~~~~-------~k~a~t~~~~ 131 (214)
..++. -.+|||+--|
T Consensus 75 ~~~~~~~~~~~t~~~~ftny~~ 96 (514)
T 3rlf_F 75 MGLFVLFPLVCTIAIAFTNYSS 96 (514)
T ss_dssp HHHHTHHHHHHHHHHTTBCCSS
T ss_pred HHHHHHHHHHheEeeeeeccCC
Confidence 55443 4778887644
No 9
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=17.75 E-value=53 Score=21.35 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=14.4
Q ss_pred hHHHHHhhhhHHhhhhhhhcchhh
Q 048662 171 MAEEAIRRAEIARLRELHTLKGQV 194 (214)
Q Consensus 171 ~~~~a~rr~~~a~l~~~~~l~~~~ 194 (214)
-.|+|..|+|++. ++++.|+.+.
T Consensus 7 ELeEa~Erae~ae-~~vnkLR~k~ 29 (45)
T 3zwh_Q 7 ELEDATETADAMN-REVSSLKNKL 29 (45)
T ss_dssp HHHHHTTTHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHh
Confidence 3455666777776 6666666554
No 10
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=15.85 E-value=2.4e+02 Score=24.19 Aligned_cols=11 Identities=9% Similarity=-0.124 Sum_probs=6.6
Q ss_pred ccccccCchHH
Q 048662 75 FATIEGIGWGW 85 (214)
Q Consensus 75 ~~~m~~Igw~~ 85 (214)
|..|+.+.|.+
T Consensus 303 f~~mPel~~~~ 313 (339)
T 4ev6_A 303 FSYLPLANNPQ 313 (339)
T ss_dssp CSCCTTSSCTT
T ss_pred CCCCCCccCch
Confidence 33477776664
Done!