Query         048667
Match_columns 425
No_of_seqs    178 out of 1725
Neff          11.0
Searched_HMMs 46136
Date          Fri Mar 29 11:49:35 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048667.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048667hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 9.5E-78 2.1E-82  556.5  39.0  398    1-410    63-463 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 6.3E-74 1.4E-78  551.4  41.3  417    1-423    96-518 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 1.5E-74 3.2E-79  527.1  33.2  390    1-409    69-470 (499)
  4 PLN03234 cytochrome P450 83B1; 100.0 1.2E-73 2.5E-78  547.3  39.9  415    1-424    65-483 (499)
  5 PLN02183 ferulate 5-hydroxylas 100.0   2E-73 4.3E-78  546.1  40.5  412    1-424    72-496 (516)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 1.1E-72 2.4E-77  541.1  40.3  413    1-420    70-489 (517)
  7 PLN02966 cytochrome P450 83A1  100.0 1.9E-72 4.1E-77  538.0  39.7  415    1-424    66-484 (502)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 4.8E-72   1E-76  533.5  39.5  402    1-411    67-471 (504)
  9 PLN03112 cytochrome P450 famil 100.0 6.7E-72 1.5E-76  536.7  40.7  420    1-423    68-491 (514)
 10 PLN02394 trans-cinnamate 4-mon 100.0 3.6E-71 7.8E-76  530.6  39.6  403    1-411    67-474 (503)
 11 PTZ00404 cytochrome P450; Prov 100.0 2.4E-71 5.1E-76  529.1  37.1  393    1-411    65-458 (482)
 12 PLN00168 Cytochrome P450; Prov 100.0 2.9E-70 6.4E-75  524.6  39.8  404    1-411    74-491 (519)
 13 KOG0159 Cytochrome P450 CYP11/ 100.0 2.2E-70 4.8E-75  488.1  35.0  395    2-411    91-494 (519)
 14 PLN03018 homomethionine N-hydr 100.0 1.8E-69 3.8E-74  516.8  41.3  406    1-410    79-497 (534)
 15 PLN02655 ent-kaurene oxidase   100.0 1.4E-69 2.9E-74  513.6  39.6  399    1-411    36-439 (466)
 16 PLN02290 cytokinin trans-hydro 100.0 2.8E-69   6E-74  518.8  38.1  393    1-411    97-491 (516)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 4.8E-70   1E-74  515.6  31.7  393    1-411    74-472 (497)
 18 PLN02738 carotene beta-ring hy 100.0 3.7E-69   8E-74  520.0  38.4  391    1-411   168-570 (633)
 19 PLN02169 fatty acid (omega-1)- 100.0 2.4E-69 5.1E-74  514.0  35.8  392    3-411    75-476 (500)
 20 PF00067 p450:  Cytochrome P450 100.0 1.4E-69   3E-74  517.8  30.5  399    1-411    37-441 (463)
 21 PLN02500 cytochrome P450 90B1  100.0 7.1E-68 1.5E-72  505.4  36.7  378    1-411    79-468 (490)
 22 PLN03195 fatty acid omega-hydr 100.0 1.3E-67 2.9E-72  506.7  36.1  398    1-411    68-492 (516)
 23 PLN02936 epsilon-ring hydroxyl 100.0 1.5E-66 3.3E-71  494.9  37.5  393    1-411    53-458 (489)
 24 PLN02426 cytochrome P450, fami 100.0 1.6E-66 3.4E-71  493.9  36.2  384    3-410    80-473 (502)
 25 PLN02774 brassinosteroid-6-oxi 100.0 1.4E-65   3E-70  485.9  35.0  373    1-412    67-443 (463)
 26 PLN02196 abscisic acid 8'-hydr 100.0 7.9E-65 1.7E-69  480.3  34.6  366    1-411    72-440 (463)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 2.3E-64   5E-69  476.4  36.0  376    1-411    48-429 (452)
 28 PLN02302 ent-kaurenoic acid ox 100.0 1.1E-63 2.4E-68  478.6  36.8  375    1-410    85-464 (490)
 29 PLN02987 Cytochrome P450, fami 100.0 4.5E-62 9.8E-67  459.9  36.5  373    1-411    71-447 (472)
 30 KOG0684 Cytochrome P450 [Secon 100.0 2.3E-58 5.1E-63  401.1  27.7  390    1-419    68-467 (486)
 31 COG2124 CypX Cytochrome P450 [ 100.0 6.9E-57 1.5E-61  416.8  30.7  335   10-410    50-387 (411)
 32 PLN02648 allene oxide synthase 100.0 1.1E-55 2.5E-60  413.3  24.7  363    1-411    59-463 (480)
 33 PF08492 SRP72:  SRP72 RNA-bind  80.8     1.1 2.3E-05   28.6   1.4    8  354-361    44-51  (59)
 34 PF12508 DUF3714:  Protein of u  76.2       1 2.2E-05   37.1   0.4   43  291-335    52-94  (200)
 35 PF12554 MOZART1:  Mitotic-spin  71.7      11 0.00024   22.8   4.0   43  231-273     5-47  (48)
 36 COG1759 5-formaminoimidazole-4  67.2      11 0.00023   33.4   4.6   72  293-397   274-352 (361)
 37 PRK06789 flagellar motor switc  66.3     7.4 0.00016   26.2   2.7   40  297-336    21-62  (74)
 38 KOG3506 40S ribosomal protein   57.0     4.8  0.0001   24.8   0.6   11  373-383    12-22  (56)
 39 PF05952 ComX:  Bacillus compet  50.6      16 0.00035   23.1   2.2   19  254-272     4-22  (57)
 40 TIGR03779 Bac_Flav_CT_M Bacter  45.7       9 0.00019   35.5   0.7   45  290-336   254-298 (410)
 41 PF09201 SRX:  SRX;  InterPro:   40.1      25 0.00054   26.8   2.1   23  380-402    18-40  (148)
 42 PF07886 BA14K:  BA14K-like pro  39.2      29 0.00063   18.8   1.8   16  368-383    16-31  (31)
 43 PF06973 DUF1297:  Domain of un  38.8     8.3 0.00018   31.0  -0.5   71  293-396   101-178 (188)
 44 PRK05933 type III secretion sy  37.9      30 0.00065   30.7   2.6   43  294-336   317-362 (372)
 45 PF09551 Spore_II_R:  Stage II   36.6      69  0.0015   24.4   4.1   19  314-332    80-98  (130)
 46 PF11138 DUF2911:  Protein of u  34.5      43 0.00094   26.1   2.8   41  315-356    51-98  (145)
 47 PF12444 Sox_N:  Sox developmen  31.1      33 0.00071   23.8   1.5   19  391-409    61-79  (84)
 48 PF14550 Peptidase_U35_2:  Puta  29.1      39 0.00085   25.4   1.7   21  315-335    72-92  (122)
 49 PHA03162 hypothetical protein;  27.9      52  0.0011   24.8   2.1   26  376-401     2-27  (135)
 50 COG1886 FliN Flagellar motor s  26.7      65  0.0014   24.9   2.6   42  295-336    83-126 (136)
 51 PTZ00218 40S ribosomal protein  26.0      30 0.00065   21.5   0.5   10  374-383    11-20  (54)
 52 PF14164 YqzH:  YqzH-like prote  25.2   2E+02  0.0043   18.8   4.1   40   79-119    24-63  (64)
 53 PF14483 Cut8_M:  Cut8 dimerisa  24.8 1.2E+02  0.0025   17.4   2.8   11  261-271    25-35  (38)
 54 PRK00400 hisE phosphoribosyl-A  24.5 2.9E+02  0.0062   20.2   7.9   67  206-278    19-93  (105)
 55 COG2101 SPT15 TATA-box binding  23.9      29 0.00063   27.7   0.3   36  351-386    35-70  (185)
 56 KOG3302 TATA-box binding prote  23.6      27 0.00058   28.4  -0.0   57  351-407    50-117 (200)
 57 PF11227 DUF3025:  Protein of u  23.1      51  0.0011   27.5   1.5   20  338-357   192-211 (212)
 58 PF14129 DUF4296:  Domain of un  23.0 2.7E+02  0.0058   19.4   6.5   50  228-277    29-78  (87)
 59 PF02663 FmdE:  FmdE, Molybdenu  22.3      61  0.0013   24.7   1.8   22  380-401     5-26  (131)
 60 PRK02759 bifunctional phosphor  21.7 4.8E+02    0.01   21.8   8.2   74  186-273   118-199 (203)
 61 COG0851 MinE Septum formation   20.7   2E+02  0.0043   20.1   3.7   17  263-279    36-52  (88)
 62 cd08780 Death_TRADD Death Doma  20.4 3.2E+02  0.0069   19.2   5.6   42   54-96     12-61  (90)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.5e-78  Score=556.54  Aligned_cols=398  Identities=41%  Similarity=0.718  Sum_probs=357.4

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCc-cccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPA-LLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~   79 (425)
                      |++|+|+.++|||+|+++++|++++++..|++||. ......+.+++.+++++++|+.|+.+||.....+++.+.+++..
T Consensus        63 ~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~  142 (489)
T KOG0156|consen   63 FTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM  142 (489)
T ss_pred             EEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH
Confidence            68999999999999999999999999999999997 33446666688999999999999999999999999999999988


Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           80 YMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                      ....++++.+++.+.+ .. .+++||+...+..++.++|++++||.++...+   .....++..++.+.....+.+...+
T Consensus       143 ~~R~~E~~~l~~~l~~-~~-~~~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~---~~~~~~~~~l~~~~~~~~~~~~~~d  217 (489)
T KOG0156|consen  143 EIREEEVDELVKKLSK-SK-KGEPVDLSELLDLLVGNVICRMLFGRRFEEED---EEEFLELKELVEESLELLGSFNLSD  217 (489)
T ss_pred             HHHHHHHHHHHHHHHh-cC-CCceeeHHHHHHHHHHHHHHHHHhCCccccCC---chHHHHHHHHHHHHHHHhCCccHHH
Confidence            8889999999999987 32 23899999999999999999999999998742   1234568899999999999888999


Q ss_pred             ccc-cccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHH
Q 048667          160 AIP-WLSFLD-LQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASN  237 (425)
Q Consensus       160 ~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~  237 (425)
                      ++| ++.+++ ..+..++......++..++++.|++++... +.    +...|+++.|++..++++.. .+++++|...+
T Consensus       218 ~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~----~~~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~  291 (489)
T KOG0156|consen  218 YFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD----EEGRDFVDALLKLMKEEKAE-GLTDDHLKALI  291 (489)
T ss_pred             HhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc----CCCCcHHHHHHHhhcccccC-CCCHHHHHHHH
Confidence            999 677765 245677777788889999999999998876 21    22289999999997765322 29999999999


Q ss_pred             HHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeec
Q 048667          238 QDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLAR  317 (425)
Q Consensus       238 ~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~  317 (425)
                      .++++||+|||++|+.|++.+|++||++|+|+++||++++|.++.++.+|+.+||||+|||+|++|++|++|..+||.+.
T Consensus       292 ~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~  371 (489)
T KOG0156|consen  292 LDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETT  371 (489)
T ss_pred             HHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCcccccccccc
Confidence            99999999999999999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             cCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHHH
Q 048667          318 KNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTLA  397 (425)
Q Consensus       318 ~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  397 (425)
                      +|+.|+||.|||||.|.++.|++||||++|+||++|+||||++++ +.+.....++|||.|+|+|||..||++++.++++
T Consensus       372 ~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la  450 (489)
T KOG0156|consen  372 EDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLA  450 (489)
T ss_pred             CCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999875 2234678999999999999999999999999999


Q ss_pred             HHHhhceeecCCC
Q 048667          398 NLLHGFEWKLPGD  410 (425)
Q Consensus       398 ~ll~~~~~~~~~~  410 (425)
                      .||++|+|+++.+
T Consensus       451 ~llq~F~w~~~~~  463 (489)
T KOG0156|consen  451 NLLQRFDWKLPGG  463 (489)
T ss_pred             HHHheeeeecCCC
Confidence            9999999999876


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=6.3e-74  Score=551.39  Aligned_cols=417  Identities=31%  Similarity=0.550  Sum_probs=331.0

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|++++|||+||+++++|+.++...|++++.......+..+..++++..+|+.|+++||.+..+++++..++.+.+
T Consensus        96 ~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~  175 (543)
T PLN02971         96 ACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHD  175 (543)
T ss_pred             EEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            57899999999999999999999988888999886443333332223456777799999999999667777777778889


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccC-CCCChhHHHHHHHHHHHHhc---ccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDEN-NVVTPKEFTEIVDELFLISG---VLD  156 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~  156 (425)
                      .+.++++.+++.+.+... +++++|+.+.+.+++++++++++||.++.....+ .+....++...+..+.....   ...
T Consensus       176 ~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (543)
T PLN02971        176 NRAEETDHLTAWLYNMVK-NSEPVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFC  254 (543)
T ss_pred             HHHHHHHHHHHHHHHhcc-CCCceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCc
Confidence            999999999888765443 4568999999999999999999999987432100 00011223333444432221   112


Q ss_pred             ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHH
Q 048667          157 IGDAIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKAS  236 (425)
Q Consensus       157 ~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~  236 (425)
                      +.+++|++.+++..+..+...+..+.+.+++..+|+++++..+.+  ......|+++.|++..++++ ...+++++|.++
T Consensus       255 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~  331 (543)
T PLN02971        255 ISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREG--KRTQIEDFLDIFISIKDEAG-QPLLTADEIKPT  331 (543)
T ss_pred             HHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHh
Confidence            345667666553223344556667778888888998887654221  11234699999998654321 224999999999


Q ss_pred             HHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeee
Q 048667          237 NQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLA  316 (425)
Q Consensus       237 ~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~  316 (425)
                      +.++++||+|||+++++|++++|+.||++|+|+++||++++++++.++++++++||||+|||+|+||++|++|..++|.+
T Consensus       332 ~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~  411 (543)
T PLN02971        332 IKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVA  411 (543)
T ss_pred             HHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceec
Confidence            99999999999999999999999999999999999999999887889999999999999999999999999999778999


Q ss_pred             ccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcC--ccCCccceeecCCCCCCCCChHHHHHHHHH
Q 048667          317 RKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEID--VVGHNFELLPFGAGRRMCAGYALGLKTVQS  394 (425)
Q Consensus       317 ~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~--~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~  394 (425)
                      .+|++++||.|||||.|.++.|++||||++|+||++|+||||+++..+  ....+..|+|||+|+|.|+|++||++|+++
T Consensus       412 ~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~  491 (543)
T PLN02971        412 LSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTM  491 (543)
T ss_pred             CCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999975422  112456899999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCCCCCCCchhhhcC
Q 048667          395 TLANLLHGFEWKLPGDVKKEDLDMEERFG  423 (425)
Q Consensus       395 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  423 (425)
                      ++++||++|+|+++++.  .++++.+.|+
T Consensus       492 ~la~ll~~f~~~~~~~~--~~~~~~~~~~  518 (543)
T PLN02971        492 MLARLLQGFKWKLAGSE--TRVELMESSH  518 (543)
T ss_pred             HHHHHHHhCEEEeCCCC--CCcchhhhcC
Confidence            99999999999987654  4567777665


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-74  Score=527.05  Aligned_cols=390  Identities=23%  Similarity=0.346  Sum_probs=312.4

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCC--ccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRP--ALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEF   78 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~   78 (425)
                      +.++.|.++.++|+||+++++|+.++.++|..+.  ......- .....++ |...|++||+.|..+ +|.|+..+++++
T Consensus        69 ~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~-~l~~~~L-f~~~g~~WK~lR~~l-sP~Fts~kmk~m  145 (499)
T KOG0158|consen   69 VGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED-PLSALNL-FFLRGERWKRLRTKL-SPTFTSGKLKKM  145 (499)
T ss_pred             EEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC-cccccCc-hhccCchHHHHHHhh-ccccchhhHHHH
Confidence            4678899999999999999999999999999954  3222211 1112334 444599999999999 899999999999


Q ss_pred             hhhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHH-hcccc-
Q 048667           79 EYMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLI-SGVLD-  156 (425)
Q Consensus        79 ~~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-  156 (425)
                      .|.+++.++++++.+.+... .+..+++.+.+.+++.|+|++++||.+.++...    ...+|.......... ..... 
T Consensus       146 ~~t~~~~~~~l~~~l~~~~~-~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d----~~~~F~~~~~~~~~~~~~~~~l  220 (499)
T KOG0158|consen  146 FPTMEEVGDELVRHLRRKSE-GGQEGEIKDLCARYTTDVIGSCAFGLDANSLRD----PKAEFRRMGRRAFFLSRGLFPL  220 (499)
T ss_pred             HHHHHHHHHHHHHHHHHhhc-ccCCccHHHHHHHHHHHHHhHhhcccchhhhcC----chHHHHHhhHHHHHHhhccchH
Confidence            99999999999999998644 225899999999999999999999999987441    114555444444333 22111 


Q ss_pred             ---ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCC--Cc-ccc-ccc
Q 048667          157 ---IGDAIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADD--PT-LEV-KLE  229 (425)
Q Consensus       157 ---~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~--~~-~~~-~l~  229 (425)
                         ....+|.+...  ........+..+.+.+++...++.|..       ....+.|+++.|++.+.+  .+ ... .++
T Consensus       221 ~~~~~~~~p~l~~~--l~~~~~~~~~~~~~~~~v~~~v~~R~~-------~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt  291 (499)
T KOG0158|consen  221 KFMLIFLFPKLALP--LRVKLFPEDVTDFFRKLVNSRVEQREK-------ENIERNDFIDLLLDARASDFAKSKSHKALT  291 (499)
T ss_pred             hHhHHHHhHHHHHh--hhcccChHHHHHHHHHHHHHHHHHHHh-------cCCCCchHHHHHHHhhcccccccccccccC
Confidence               12223322221  001112233444455555555555521       236889999999998853  11 111 599


Q ss_pred             HHHHHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCcc
Q 048667          230 RDHIKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAAT  309 (425)
Q Consensus       230 ~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  309 (425)
                      .+||+++|+.+++||.||||++|++++|+||+||++|+||++||++++.....+|++.+.+|+||++||+||||+||++|
T Consensus       292 ~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~  371 (499)
T KOG0158|consen  292 DDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAP  371 (499)
T ss_pred             HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcc
Confidence            99999999999999999999999999999999999999999999999766444999999999999999999999999999


Q ss_pred             ccceeeeccCeeee-ceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHH
Q 048667          310 LLVPRLARKNCKLD-GYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALG  388 (425)
Q Consensus       310 ~~~~R~~~~~~~i~-g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la  388 (425)
                      .. .|.+++|++++ ++.||||+.|.++++++||||++||||++|+||||.+++.+ ..++..|+|||.|||.|+|.+||
T Consensus       372 ~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa  449 (499)
T KOG0158|consen  372 FL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFA  449 (499)
T ss_pred             cc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHH
Confidence            95 59999999999 99999999999999999999999999999999999977644 45789999999999999999999


Q ss_pred             HHHHHHHHHHHHhhceeecCC
Q 048667          389 LKTVQSTLANLLHGFEWKLPG  409 (425)
Q Consensus       389 ~~~~~~~l~~ll~~~~~~~~~  409 (425)
                      .+|+|++|++||++|+++.++
T Consensus       450 ~mq~K~~L~~lL~~f~~~~~~  470 (499)
T KOG0158|consen  450 LMEAKLALAHLLRNFSFEVCP  470 (499)
T ss_pred             HHHHHHHHHHHHhhCEEecCC
Confidence            999999999999999999987


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.2e-73  Score=547.32  Aligned_cols=415  Identities=36%  Similarity=0.664  Sum_probs=340.2

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|+.++|+++||+++++|+.++...|..++...........+..+.++.+++.|+++||.+..++|++++++++.+
T Consensus        65 ~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~  144 (499)
T PLN03234         65 FTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRP  144 (499)
T ss_pred             EEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHH
Confidence            57899999999999999999999988778888876543332233334455666789999999986579999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+.++.+++.|.+... +++++|+.+.+..+++|+++.++||.+++...    .....+.+.+.......+.......
T Consensus       145 ~i~~~~~~ll~~l~~~~~-~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  219 (499)
T PLN03234        145 VREEECQRMMDKIYKAAD-QSGTVDLSELLLSFTNCVVCRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDL  219 (499)
T ss_pred             HHHHHHHHHHHHHHHhcc-CCCeEEHHHHHHHHHHHHHHHHHhCCcccccc----hhHHHHHHHHHHHHHHcCCCcHHHH
Confidence            999999999999986654 56789999999999999999999999887533    1224555555554433333333445


Q ss_pred             cccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHH
Q 048667          161 IPWLSFLD-LQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQD  239 (425)
Q Consensus       161 ~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  239 (425)
                      +|++.++. ..+..++..++.+.+.+++..+|+++++....    .....|+++.|++..++++.+..+++++|.+++.+
T Consensus       220 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~  295 (499)
T PLN03234        220 FPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP----KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILD  295 (499)
T ss_pred             hhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc----CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHH
Confidence            56554432 12335677788899999999999887654311    13457899999976544321236899999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeeccC
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLARKN  319 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~  319 (425)
                      +++||+|||+++++|++|+|++||++|+++++|++++++++..++++++++||||+|||+|+||++||+|..++|.+.+|
T Consensus       296 ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d  375 (499)
T PLN03234        296 IVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIAD  375 (499)
T ss_pred             HHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCC
Confidence            99999999999999999999999999999999999999877778999999999999999999999999999767999999


Q ss_pred             eeeeceeeCCCCEEEEechhccCCCCCC-CCCCCCCCCCCCCCCcC--ccCCccceeecCCCCCCCCChHHHHHHHHHHH
Q 048667          320 CKLDGYDIIKNSRVIINVWAIGRDPTIW-EKPDEFCPERFIGKEID--VVGHNFELLPFGAGRRMCAGYALGLKTVQSTL  396 (425)
Q Consensus       320 ~~i~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~p~R~~~~~~~--~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l  396 (425)
                      ++++|+.|||||.|.++.|.+||||++| +||++|+||||+++..+  ....+..|+|||+|+|+|||+++|++|+++++
T Consensus       376 ~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~l  455 (499)
T PLN03234        376 AKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPF  455 (499)
T ss_pred             eeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHH
Confidence            9999999999999999999999999999 89999999999975422  12346789999999999999999999999999


Q ss_pred             HHHHhhceeecCCCCCCCCCchhhhcCC
Q 048667          397 ANLLHGFEWKLPGDVKKEDLDMEERFGL  424 (425)
Q Consensus       397 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~  424 (425)
                      |.|+++|+|+++++.+++.+.....+|+
T Consensus       456 a~ll~~f~~~~~~~~~~~~~~~~~~~~~  483 (499)
T PLN03234        456 ANLLYKFDWSLPKGIKPEDIKMDVMTGL  483 (499)
T ss_pred             HHHHHheeeeCCCCCCCCCCCccccccc
Confidence            9999999999988766666666665554


No 5  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2e-73  Score=546.13  Aligned_cols=412  Identities=37%  Similarity=0.680  Sum_probs=334.2

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|+.++|+|+||+++++|+.+++..|+.++..........++.+.+++.+|+.|+++||.+.+++|+.+.++.+.+
T Consensus        72 ~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~  151 (516)
T PLN02183         72 FHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWAS  151 (516)
T ss_pred             eEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            67899999999999999999999988788888876433332322234556666799999999995579999999999988


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      + .++++.+++.|...   .++++|+.+++..+++|++++++||...+...       .++.+.+..+............
T Consensus       152 ~-~~~~~~~~~~l~~~---~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  220 (516)
T PLN02183        152 V-RDEVDSMVRSVSSN---IGKPVNIGELIFTLTRNITYRAAFGSSSNEGQ-------DEFIKILQEFSKLFGAFNVADF  220 (516)
T ss_pred             H-HHHHHHHHHHHHhc---CCCcEeHHHHHHHHHHHHHHhHhhcCcccchH-------HHHHHHHHHHHHHhCCccHHHh
Confidence            6 46889999999652   46789999999999999999999998775432       4566666665544443344556


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---ccCCCCcHHHHHHhhcCCCc---------ccccc
Q 048667          161 IPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWV---KEHGANDMVDVLLQLADDPT---------LEVKL  228 (425)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~dll~~ll~~~~~~~---------~~~~l  228 (425)
                      +|++.++.+....++..+..+.+.+++..+|++++++...+..   .+....|+++.|++...++.         .+..+
T Consensus       221 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l  300 (516)
T PLN02183        221 IPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKL  300 (516)
T ss_pred             cchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCC
Confidence            7776655333345667777888888888888887765422100   01134689999998643210         02258


Q ss_pred             cHHHHHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCc
Q 048667          229 ERDHIKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAA  308 (425)
Q Consensus       229 ~~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~  308 (425)
                      +++++..++.++++||+|||+.+++|++++|++||++|+|+++|++++++.+..++++++++||||+|||+|+||++||+
T Consensus       301 ~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~  380 (516)
T PLN02183        301 TRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPI  380 (516)
T ss_pred             CHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCc
Confidence            99999999999999999999999999999999999999999999999998666789999999999999999999999999


Q ss_pred             cccceeeeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcC-ccCCccceeecCCCCCCCCChHH
Q 048667          309 TLLVPRLARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEID-VVGHNFELLPFGAGRRMCAGYAL  387 (425)
Q Consensus       309 ~~~~~R~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~-~~~~~~~~~~Fg~G~~~C~G~~l  387 (425)
                      |+.. |.+.+|++++|+.|||||.|.++.|++||||++|+||++|+||||++++.. ...+...|+|||.|+|+|+|++|
T Consensus       381 p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~l  459 (516)
T PLN02183        381 PLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQL  459 (516)
T ss_pred             ccee-eeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHH
Confidence            9985 999999999999999999999999999999999999999999999965421 12345689999999999999999


Q ss_pred             HHHHHHHHHHHHHhhceeecCCCCCCCCCchhhhcCC
Q 048667          388 GLKTVQSTLANLLHGFEWKLPGDVKKEDLDMEERFGL  424 (425)
Q Consensus       388 a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  424 (425)
                      |++|+++++|+|+++|++++.++..+++++..+.+|+
T Consensus       460 A~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  496 (516)
T PLN02183        460 GLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGL  496 (516)
T ss_pred             HHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccc
Confidence            9999999999999999999987654445666565554


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.1e-72  Score=541.06  Aligned_cols=413  Identities=38%  Similarity=0.723  Sum_probs=338.5

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|++++|+++||+++++|+.++...|++++.......+...+.+++++.+|+.|+++||.+.+++|+.++++++.+
T Consensus        70 ~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~  149 (517)
T PLN02687         70 FRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRH  149 (517)
T ss_pred             eEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHH
Confidence            57899999999999999999999988788888876543333333345667777799999999999438999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.++++.+++.|.+..  +++++|+.+++..+++|+++.++||.++...+.  ......+...+..+....+...+...
T Consensus       150 ~i~~~~~~l~~~l~~~~--~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (517)
T PLN02687        150 VREEEVALLVRELARQH--GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDG--DEKAREFKEMVVELMQLAGVFNVGDF  225 (517)
T ss_pred             HHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHHHhCccccccCC--cchHHHHHHHHHHHHHHhccCcHHHH
Confidence            99999999999997643  356899999999999999999999998754221  11224566666666554443333356


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCC---cccccccHHHHHHHH
Q 048667          161 IPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDP---TLEVKLERDHIKASN  237 (425)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~---~~~~~l~~~~i~~~~  237 (425)
                      +|++.++.+....++..+..+.+.+++.++|+++++....+   .....|+++.|++...++   +.+..++++++.+++
T Consensus       226 ~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~  302 (517)
T PLN02687        226 VPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG---SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALL  302 (517)
T ss_pred             hhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CcccccHHHHHHHhhccccccccccCCCHHHHHHHH
Confidence            77666554333345666778888889999999887664221   134579999999875432   113469999999999


Q ss_pred             HHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeec
Q 048667          238 QDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLAR  317 (425)
Q Consensus       238 ~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~  317 (425)
                      .++++||+|||+++++|++|+|++||++|+|+++|++++++.+..++++++++||||+|||+|+||++|+++..++|.+.
T Consensus       303 ~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~  382 (517)
T PLN02687        303 LNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAA  382 (517)
T ss_pred             HHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCC
Confidence            99999999999999999999999999999999999999998777789999999999999999999999999987789999


Q ss_pred             cCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcC----ccCCccceeecCCCCCCCCChHHHHHHHH
Q 048667          318 KNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEID----VVGHNFELLPFGAGRRMCAGYALGLKTVQ  393 (425)
Q Consensus       318 ~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~----~~~~~~~~~~Fg~G~~~C~G~~la~~~~~  393 (425)
                      +|++++|+.||+||.|.++.|++||||++|+||++|+||||++++..    ....+..|+|||+|+|.|||++||++|++
T Consensus       383 ~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~  462 (517)
T PLN02687        383 EECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVT  462 (517)
T ss_pred             CCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHH
Confidence            99999999999999999999999999999999999999999975321    11245689999999999999999999999


Q ss_pred             HHHHHHHhhceeecCCCCCCCCCchhh
Q 048667          394 STLANLLHGFEWKLPGDVKKEDLDMEE  420 (425)
Q Consensus       394 ~~l~~ll~~~~~~~~~~~~~~~~~~~~  420 (425)
                      +++++||++|++++.++.+++++....
T Consensus       463 ~~la~ll~~f~~~~~~~~~~~~~~~~~  489 (517)
T PLN02687        463 LLTATLVHAFDWELADGQTPDKLNMEE  489 (517)
T ss_pred             HHHHHHHHhcceecCCCCCcccCCccc
Confidence            999999999999998765444454433


No 7  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.9e-72  Score=538.02  Aligned_cols=415  Identities=35%  Similarity=0.643  Sum_probs=327.2

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|++++|+++||+++++|+.++...|.+++..........+..++.+..+|+.|+++|+.+++++|++++++.+.+
T Consensus        66 ~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~  145 (502)
T PLN02966         66 LSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKH  145 (502)
T ss_pred             EEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            56799999999999999999999987777776654332222222333454555699999999995589999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+.++++++.|.+... +++++|+.+++..+++|+++.++||.+++....    ....+.+++...............
T Consensus       146 ~i~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  220 (502)
T PLN02966        146 VREEEARRMMDKINKAAD-KSEVVDISELMLTFTNSVVCRQAFGKKYNEDGE----EMKRFIKILYGTQSVLGKIFFSDF  220 (502)
T ss_pred             HHHHHHHHHHHHHHHhcc-CCCceeHHHHHHHHHHHHHHHHHhCCccCccch----HHHHHHHHHHHHHHHhCcccHHHh
Confidence            999999999999987544 566899999999999999999999998875331    124455555444433333233344


Q ss_pred             cccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHH
Q 048667          161 IPWLSFLD-LQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQD  239 (425)
Q Consensus       161 ~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  239 (425)
                      +|++..+. .....+......+...+++...++++......    .....|+++.|++..+++..+..++++++.+++.+
T Consensus       221 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~  296 (502)
T PLN02966        221 FPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV----KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILD  296 (502)
T ss_pred             hchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc----ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHH
Confidence            55433221 11112333445556667777777665543211    12346899999977654322336899999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC--cccccccccCChhHHHHHHhhccCCCCccccceeeec
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRN--KWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLAR  317 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~  317 (425)
                      +++||+|||+++|+|++|+|++||++|+|+++|++++++.+  ..++++++++||||+|||+|+||++|++|..++|.+.
T Consensus       297 l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~  376 (502)
T PLN02966        297 IVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACI  376 (502)
T ss_pred             HHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccC
Confidence            99999999999999999999999999999999999998742  3579999999999999999999999999997779999


Q ss_pred             cCeeeeceeeCCCCEEEEechhccCCCCCC-CCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHH
Q 048667          318 KNCKLDGYDIIKNSRVIINVWAIGRDPTIW-EKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTL  396 (425)
Q Consensus       318 ~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l  396 (425)
                      +|++++|+.|||||.|.++.|++||||++| +||++|+||||++++.+....+..|+|||.|+|+|+|++||++|+++++
T Consensus       377 ~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~l  456 (502)
T PLN02966        377 QDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPY  456 (502)
T ss_pred             CCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999 9999999999996543222346789999999999999999999999999


Q ss_pred             HHHHhhceeecCCCCCCCCCchhhhcCC
Q 048667          397 ANLLHGFEWKLPGDVKKEDLDMEERFGL  424 (425)
Q Consensus       397 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~  424 (425)
                      |.||++|+|++.++.+++.+++...+|+
T Consensus       457 a~ll~~f~i~~~~~~~~~~~~~~~~~~~  484 (502)
T PLN02966        457 ANLLLNFNFKLPNGMKPDDINMDVMTGL  484 (502)
T ss_pred             HHHHHhceeeCCCCCCcccCCcccccCe
Confidence            9999999999988776666666555554


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=4.8e-72  Score=533.55  Aligned_cols=402  Identities=38%  Similarity=0.701  Sum_probs=329.8

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|++++|+|+||+++++++.++...|+.++..........++.+.+++.+|+.|+++|+.+..++|++++++.+.+
T Consensus        67 ~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~  146 (504)
T PLN00110         67 MFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQ  146 (504)
T ss_pred             EEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhH
Confidence            57899999999999999999999988778888876543322223334566667799999999999435899999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+++..+++.+.+... +++++|+.+++..+++|+++.++||.++.....   ....++..++...........+...
T Consensus       147 ~i~~~~~~~~~~l~~~~~-~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  222 (504)
T PLN00110        147 VRTVELGHMLRAMLELSQ-RGEPVVVPEMLTFSMANMIGQVILSRRVFETKG---SESNEFKDMVVELMTTAGYFNIGDF  222 (504)
T ss_pred             HHHHHHHHHHHHHHHhcc-CCCcEeHHHHHHHHHHHHHHHHHhCCcccccCc---hhHHHHHHHHHHHHHHhccccHHHH
Confidence            999999999999976544 567899999999999999999999998722110   1225677777766554433334456


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHHH
Q 048667          161 IPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQDL  240 (425)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  240 (425)
                      +|++.+++..+..++..+..+.+.+++.+.++++++....    ...+.|+++.|++..+.+. +..++++++.+++.++
T Consensus       223 ~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~  297 (504)
T PLN00110        223 IPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE----RKGNPDFLDVVMANQENST-GEKLTLTNIKALLLNL  297 (504)
T ss_pred             cchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc----cccCCChhhHHhhcccccC-CCCCCHHHHHHHHHhh
Confidence            7766654333344566667788888888888887654311    1234689999997653321 3469999999999999


Q ss_pred             HHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeeccCe
Q 048667          241 LLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLARKNC  320 (425)
Q Consensus       241 ~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~  320 (425)
                      ++||+|||+++++|++++|++||++|+|+++|++++++.+..++++++++||||+|||+|+||++|+++..++|.+.+|+
T Consensus       298 ~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~  377 (504)
T PLN00110        298 FTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQAC  377 (504)
T ss_pred             hcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCe
Confidence            99999999999999999999999999999999999998777789999999999999999999999999987789999999


Q ss_pred             eeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCcc---CCccceeecCCCCCCCCChHHHHHHHHHHHH
Q 048667          321 KLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVV---GHNFELLPFGAGRRMCAGYALGLKTVQSTLA  397 (425)
Q Consensus       321 ~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~---~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  397 (425)
                      +++||.|||||.|.++.+++||||++|+||++|+||||++++....   .....|+|||+|+|.|+|++||++|++++++
T Consensus       378 ~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la  457 (504)
T PLN00110        378 EVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILG  457 (504)
T ss_pred             eeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999996532111   1235899999999999999999999999999


Q ss_pred             HHHhhceeecCCCC
Q 048667          398 NLLHGFEWKLPGDV  411 (425)
Q Consensus       398 ~ll~~~~~~~~~~~  411 (425)
                      .|+++|++++.++.
T Consensus       458 ~ll~~f~~~~~~~~  471 (504)
T PLN00110        458 TLVHSFDWKLPDGV  471 (504)
T ss_pred             HHHHhceeecCCCC
Confidence            99999999997653


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=6.7e-72  Score=536.66  Aligned_cols=420  Identities=36%  Similarity=0.653  Sum_probs=337.3

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|+.++|+++||+++++|+.++...|++++.........++..+.+++.+|+.|+++||.+.+++|++++++.+.+
T Consensus        68 ~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~  147 (514)
T PLN03112         68 VYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAK  147 (514)
T ss_pred             EEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhH
Confidence            57899999999999999999999988888888776533322223333455666799999999997567999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+.++.+++.+.+... +++++|+.+.+..++++++++++||.++.............+..++..+...........+
T Consensus       148 ~~~~~~~~lv~~l~~~~~-~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (514)
T PLN03112        148 HRAEEARHLIQDVWEAAQ-TGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDY  226 (514)
T ss_pred             HHHHHHHHHHHHHHHhhc-cCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHh
Confidence            999999999998876543 5678999999999999999999999987542211111224566666655544333334456


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHHH
Q 048667          161 IPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQDL  240 (425)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  240 (425)
                      +|++.++.+.+..++..+..+.+.+++...++++++..+.+. ......|+++.|++...+++ ...+++++|.+++.++
T Consensus       227 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~  304 (514)
T PLN03112        227 LPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKL-PGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDM  304 (514)
T ss_pred             ChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-cCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHH
Confidence            676666544344566777888888899999988776542211 11234699999998654331 2358999999999999


Q ss_pred             HHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeeccCe
Q 048667          241 LLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLARKNC  320 (425)
Q Consensus       241 ~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~  320 (425)
                      ++||+|||+++++|++++|++||++|+|+++|++++++.++.++++++++||||+|||+|++|++|++|..++|.+.+|+
T Consensus       305 ~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~  384 (514)
T PLN03112        305 IAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRAT  384 (514)
T ss_pred             hccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCe
Confidence            99999999999999999999999999999999999998877799999999999999999999999999987779999999


Q ss_pred             eeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcC----ccCCccceeecCCCCCCCCChHHHHHHHHHHH
Q 048667          321 KLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEID----VVGHNFELLPFGAGRRMCAGYALGLKTVQSTL  396 (425)
Q Consensus       321 ~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~----~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l  396 (425)
                      +++|+.|||||.|.++.+++||||++|+||++|+||||+.+...    .......|+|||+|+|.|||++||++|+++++
T Consensus       385 ~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~l  464 (514)
T PLN03112        385 TINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMAL  464 (514)
T ss_pred             eEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998753211    01234689999999999999999999999999


Q ss_pred             HHHHhhceeecCCCCCCCCCchhhhcC
Q 048667          397 ANLLHGFEWKLPGDVKKEDLDMEERFG  423 (425)
Q Consensus       397 ~~ll~~~~~~~~~~~~~~~~~~~~~~~  423 (425)
                      +.||++|+|++.++...+++...+.++
T Consensus       465 a~ll~~f~~~~~~~~~~~~~~~~~~~~  491 (514)
T PLN03112        465 ARLFHCFDWSPPDGLRPEDIDTQEVYG  491 (514)
T ss_pred             HHHHHheeeecCCCCCcccCCCccccC
Confidence            999999999997654444555544443


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.6e-71  Score=530.62  Aligned_cols=403  Identities=30%  Similarity=0.530  Sum_probs=310.4

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|++++|+|+||+++++|+.++...|..++.......+...+.+++++.+|+.|+++||.+..++|++++++.+.+
T Consensus        67 ~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~  146 (503)
T PLN02394         67 FLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRY  146 (503)
T ss_pred             EEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhH
Confidence            57899999999999999999999877777877765433333322234566666799999999998459999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcc--cccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGV--LDIG  158 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  158 (425)
                      .++++++.++++|.+.....++.+|+.+.+..+++|++++++||.+++..+.   .....+.............  ..+.
T Consensus       147 ~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  223 (503)
T PLN02394        147 GWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDRRFESEDD---PLFLKLKALNGERSRLAQSFEYNYG  223 (503)
T ss_pred             HHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCCCcccccc---hhHHHHHHHHHHHHHHhcccccchh
Confidence            9999999999999765331345699999999999999999999999875331   1112222222222211111  1122


Q ss_pred             ccccccccccccchHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHH
Q 048667          159 DAIPWLSFLDLQGNVKRMKAVKKKANK-FYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASN  237 (425)
Q Consensus       159 ~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~  237 (425)
                      ..+|++.+.. ....+........... +....++++++..+.+........|+++.|++...++    .++++++..++
T Consensus       224 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~  298 (503)
T PLN02394        224 DFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIV  298 (503)
T ss_pred             hhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhccccC----CCCHHHHHHHH
Confidence            3445443221 1111222222222222 3334566665433211001123478999999876432    68999999999


Q ss_pred             HHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeec
Q 048667          238 QDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLAR  317 (425)
Q Consensus       238 ~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~  317 (425)
                      .++++||+|||+++++|++|+|++||++|+||++|++++.+.+..++++++++||||+|||+|+||++|++|+..+|.+.
T Consensus       299 ~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~  378 (503)
T PLN02394        299 ENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNL  378 (503)
T ss_pred             HHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecC
Confidence            99999999999999999999999999999999999999998766789999999999999999999999999999889999


Q ss_pred             cCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcC--ccCCccceeecCCCCCCCCChHHHHHHHHHH
Q 048667          318 KNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEID--VVGHNFELLPFGAGRRMCAGYALGLKTVQST  395 (425)
Q Consensus       318 ~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~--~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~  395 (425)
                      +|++++||.||+||.|.++.|++||||++|+||++|+||||++++.+  .......|+|||+|+|+|||++||++|++++
T Consensus       379 ~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~  458 (503)
T PLN02394        379 EDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIV  458 (503)
T ss_pred             CCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999975421  1224578999999999999999999999999


Q ss_pred             HHHHHhhceeecCCCC
Q 048667          396 LANLLHGFEWKLPGDV  411 (425)
Q Consensus       396 l~~ll~~~~~~~~~~~  411 (425)
                      +|.|+++|++++.++.
T Consensus       459 la~ll~~f~~~~~~~~  474 (503)
T PLN02394        459 LGRLVQNFELLPPPGQ  474 (503)
T ss_pred             HHHHHHHceeEeCCCC
Confidence            9999999999987764


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.4e-71  Score=529.07  Aligned_cols=393  Identities=23%  Similarity=0.354  Sum_probs=312.7

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|++++|+++||+++++|+.++...|..++.......... +.+++.+ +|+.|+++|+++ ++.|++.+++.+.+
T Consensus        65 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~-~~~l~~~-~g~~w~~~Rk~~-~~~f~~~~l~~~~~  141 (482)
T PTZ00404         65 FRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTF-YHGIVTS-SGEYWKRNREIV-GKAMRKTNLKHIYD  141 (482)
T ss_pred             eEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeecc-CCceecc-ChHHHHHHHHHH-HHHHhhhccccHHH
Confidence            57899999999999999999999977777877765543322222 4555555 699999999998 79999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+.++.+++.|.+..+ .++.+|+..++..+++|+++.++||.+++..+...+.....+...+..++...........
T Consensus       142 ~i~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (482)
T PTZ00404        142 LLDDQVDVLIESMKKIES-SGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDV  220 (482)
T ss_pred             HHHHHHHHHHHHHHHHHh-cCCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhh
Confidence            999999999999976543 4667999999999999999999999988653210011124566666665544333222222


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHHH
Q 048667          161 IPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQDL  240 (425)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  240 (425)
                      ++++.... ........+..+.+.+++.+.+++++++.     +.....|+++.|++...+.   ...+.++|++++.++
T Consensus       221 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~  291 (482)
T PTZ00404        221 IEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTI-----DPEVPRDLLDLLIKEYGTN---TDDDILSILATILDF  291 (482)
T ss_pred             hhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CCCCcccHHHHHHHHhccC---CcccHHHHHHHHHHH
Confidence            33222211 11122334556667777777666655432     1123579999999864321   123344589999999


Q ss_pred             HHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeeccCe
Q 048667          241 LLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLARKNC  320 (425)
Q Consensus       241 ~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~  320 (425)
                      ++||+|||+++++|++|+|++||++|+||++|++++++++..++++++++||||+|||+|+||||||+|..++|.+.+|+
T Consensus       292 ~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~  371 (482)
T PTZ00404        292 FLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDI  371 (482)
T ss_pred             HHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCE
Confidence            99999999999999999999999999999999999998767789999999999999999999999999986689999999


Q ss_pred             ee-eceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHHHHH
Q 048667          321 KL-DGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTLANL  399 (425)
Q Consensus       321 ~i-~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~l  399 (425)
                      ++ +|+.|||||.|.++.+++||||++|+||++|+||||++..     .+..|+|||+|+|.|||++||++|++++++.|
T Consensus       372 ~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~l  446 (482)
T PTZ00404        372 IIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNI  446 (482)
T ss_pred             EecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHH
Confidence            99 9999999999999999999999999999999999998642     45799999999999999999999999999999


Q ss_pred             HhhceeecCCCC
Q 048667          400 LHGFEWKLPGDV  411 (425)
Q Consensus       400 l~~~~~~~~~~~  411 (425)
                      +++|+|+++++.
T Consensus       447 l~~f~~~~~~~~  458 (482)
T PTZ00404        447 ILNFKLKSIDGK  458 (482)
T ss_pred             HHhcEEecCCCC
Confidence            999999987653


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.9e-70  Score=524.61  Aligned_cols=404  Identities=25%  Similarity=0.447  Sum_probs=320.0

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|+.++|+++||+++++++.++...|+.++..........++..+.+..+|+.|+++||.+.+++|++++++++.+
T Consensus        74 ~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~  153 (519)
T PLN00168         74 VSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAP  153 (519)
T ss_pred             EEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHH
Confidence            57899999999999999999999988888888876443222221112233335699999999865589999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHh-ccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLIS-GVLDIGD  159 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  159 (425)
                      .+.++++.+++.|.+... .++.+|+.+.+..++.++++.++||.+++...      ...+......+.... ....+..
T Consensus       154 ~~~~~~~~l~~~l~~~~~-~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  226 (519)
T PLN00168        154 ARAWVRRVLVDKLRREAE-DAAAPRVVETFQYAMFCLLVLMCFGERLDEPA------VRAIAAAQRDWLLYVSKKMSVFA  226 (519)
T ss_pred             HHHHHHHHHHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHcCCCcChhh------HHHHHHHHHHHHHHhcCCCCHHH
Confidence            999999999999987543 44578999999999999999999999886321      123333333332221 2223345


Q ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-h---hcc---CCCCcHHHHHHhhcCCCcccccccHHH
Q 048667          160 AIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRK-W---VKE---HGANDMVDVLLQLADDPTLEVKLERDH  232 (425)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~---~~~---~~~~dll~~ll~~~~~~~~~~~l~~~~  232 (425)
                      .+|++.+.......++..+..+.+.+++..+|+++++..... .   ...   ....|+++.|++....+..+..+++++
T Consensus       227 ~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~  306 (519)
T PLN00168        227 FFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDE  306 (519)
T ss_pred             hCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHH
Confidence            566543321112244556778888999999999887653210 0   000   124689999997654222133699999


Q ss_pred             HHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC-cccccccccCChhHHHHHHhhccCCCCcccc
Q 048667          233 IKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRN-KWVEEKDIANLPYVQAIVKEVMRLHPAATLL  311 (425)
Q Consensus       233 i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~  311 (425)
                      |.+++.++++||+|||+++++|++++|++||++|+|+++|++++++++ ..++++++++||||+|||+|+||++|+++..
T Consensus       307 i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~  386 (519)
T PLN00168        307 IVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFV  386 (519)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCccc
Confidence            999999999999999999999999999999999999999999998753 5689999999999999999999999999998


Q ss_pred             ceeeeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcC-----ccCCccceeecCCCCCCCCChH
Q 048667          312 VPRLARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEID-----VVGHNFELLPFGAGRRMCAGYA  386 (425)
Q Consensus       312 ~~R~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~-----~~~~~~~~~~Fg~G~~~C~G~~  386 (425)
                      ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.+..     ....+..|+|||+|+|+|||++
T Consensus       387 ~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~  466 (519)
T PLN00168        387 LPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLG  466 (519)
T ss_pred             CCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHH
Confidence            78999999999999999999999999999999999999999999999964211     1123468999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhceeecCCCC
Q 048667          387 LGLKTVQSTLANLLHGFEWKLPGDV  411 (425)
Q Consensus       387 la~~~~~~~l~~ll~~~~~~~~~~~  411 (425)
                      ||++|++++++.||++|+|++.++.
T Consensus       467 lA~~e~~~~la~ll~~f~~~~~~~~  491 (519)
T PLN00168        467 IAMLHLEYFVANMVREFEWKEVPGD  491 (519)
T ss_pred             HHHHHHHHHHHHHHHHccceeCCCC
Confidence            9999999999999999999997653


No 13 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.2e-70  Score=488.13  Aligned_cols=395  Identities=24%  Similarity=0.353  Sum_probs=336.9

Q ss_pred             eee-ccCeeEEEeCCHHHHHHHHHhCCCccCCCC-ccccccc---cccCCceeeeccCchhHHHHHHHHhhccCCHHHHh
Q 048667            2 QLK-FGLDTVVVGSSAQVAELILKTHDTSFASRP-ALLAGKH---ANYNYSVLATAPYGPYLRQARKIYITELLNPKRLA   76 (425)
Q Consensus         2 ~~~-~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~   76 (425)
                      ... +|+...|+|.||++++.+++. ++.++.|| ....+..   ...+..|++.. .|+.|.+.|..+...++.+++++
T Consensus        91 ~~~~~G~~~~V~v~~p~d~E~v~r~-EG~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~-~G~~W~~~Rs~ln~~ll~P~~v~  168 (519)
T KOG0159|consen   91 REGMLGRVDLVHVYNPDDVEKVFRN-EGKYPFRPLLIEPWVAYRDFRGGVCGLFLL-EGPEWQRLRSALNPLLLQPQAVR  168 (519)
T ss_pred             eeccCCCCCeEEeeCHHHHHHHHhc-CCCCCCcccccchhhhhHHhhccCCCcccC-CCHHHHHHHHHhchhhcCHHHHH
Confidence            345 788999999999999999994 56678886 3222221   12234555555 59999999999987789999999


Q ss_pred             hhhhhhHHHHHHHHHHHHhhcCC--CCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcc
Q 048667           77 EFEYMRVEERKAFLCKLYKSSSN--SSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGV  154 (425)
Q Consensus        77 ~~~~~i~~~~~~~~~~l~~~~~~--~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (425)
                      .|.|.+++.++++++.+....+.  ...+.|+.+.+.+++++.||.++||.++++...+.+++.+.|.+++..++.....
T Consensus       169 ~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~  248 (519)
T KOG0159|consen  169 RYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ  248 (519)
T ss_pred             HHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH
Confidence            99999999999999999887652  4458999999999999999999999999997766667778899999999876655


Q ss_pred             cccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHH
Q 048667          155 LDIGDAIP-WLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHI  233 (425)
Q Consensus       155 ~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i  233 (425)
                      .   ...| +++++ +++.++++.++...+.+++...|++...+.+.+.....+....+..++..       .+++.+++
T Consensus       249 l---~~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~-------~~l~~k~~  317 (519)
T KOG0159|consen  249 L---MLMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLR-------KELSRKDA  317 (519)
T ss_pred             H---HhcchHHHhC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH-------ccCCHHHH
Confidence            3   2334 55555 45678999999999999999999999999865422222333344444432       27889999


Q ss_pred             HHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC-CcccccccccCChhHHHHHHhhccCCCCccccc
Q 048667          234 KASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGR-NKWVEEKDIANLPYVQAIVKEVMRLHPAATLLV  312 (425)
Q Consensus       234 ~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~  312 (425)
                      ..+++++++||+|||++++.|+||+|++||++|++|++|+.++.+. +..++.+++.+||||+||||||+||||.+|+..
T Consensus       318 ~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~  397 (519)
T KOG0159|consen  318 KANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG  397 (519)
T ss_pred             HHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc
Confidence            9999999999999999999999999999999999999999999987 678999999999999999999999999999986


Q ss_pred             eeeeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHH
Q 048667          313 PRLARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTV  392 (425)
Q Consensus       313 ~R~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~  392 (425)
                       |+..+|+.++||.|||||.|.++.+...+||++|++|++|+|||||+++. ...++..++|||.|+|+|+||++|.+|+
T Consensus       398 -R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl  475 (519)
T KOG0159|consen  398 -RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELEL  475 (519)
T ss_pred             -cccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHH
Confidence             99999999999999999999999999999999999999999999998763 2558899999999999999999999999


Q ss_pred             HHHHHHHHhhceeecCCCC
Q 048667          393 QSTLANLLHGFEWKLPGDV  411 (425)
Q Consensus       393 ~~~l~~ll~~~~~~~~~~~  411 (425)
                      .++||+|+++|+++..++.
T Consensus       476 ~llLarllr~f~V~~~~~~  494 (519)
T KOG0159|consen  476 HLLLARLLRNFKVEFLHEE  494 (519)
T ss_pred             HHHHHHHHHhcceeecCCC
Confidence            9999999999999998753


No 14 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.8e-69  Score=516.77  Aligned_cols=406  Identities=28%  Similarity=0.471  Sum_probs=314.8

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccC-CHHHHhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELL-NPKRLAEFE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f-~~~~l~~~~   79 (425)
                      |++|+|++++|+|+||+++++++.++...|+.++.......+..++.+++++.+|+.|+++|+.+ ++.| +....+.+.
T Consensus        79 ~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~  157 (534)
T PLN03018         79 ACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLE  157 (534)
T ss_pred             EEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHH
Confidence            57899999999999999999999988888998886544443332334577776799999999999 5665 555555566


Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCC---CCChhHHHHHHHHHHHH---hc
Q 048667           80 YMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENN---VVTPKEFTEIVDELFLI---SG  153 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~  153 (425)
                      +++..+++.+++.+.+... .++++|+.+.+..+++|++++++||.+++......   ......+......+...   ..
T Consensus       158 ~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (534)
T PLN03018        158 AARTIEADNLIAYIHSMYQ-RSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLP  236 (534)
T ss_pred             HHHHHHHHHHHHHHHHhcc-cCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhC
Confidence            6776788999999976433 45679999999999999999999999986432100   00111122222222211   11


Q ss_pred             ccccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHH
Q 048667          154 VLDIGDAIP-WLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDH  232 (425)
Q Consensus       154 ~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~  232 (425)
                      .....+.+| |+.++...+...+.......+.+++.++++++++....+. +.....|+++.|++..++++ ...+++++
T Consensus       237 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~-~~~ls~~~  314 (534)
T PLN03018        237 GFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWREKG-GKAAVEDWLDTFITLKDQNG-KYLVTPDE  314 (534)
T ss_pred             CCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCcccHHHHHHHhhcccC-CCCCCHHH
Confidence            111223344 4443222233445555667788888888988876542110 11234699999998654431 11489999


Q ss_pred             HHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccc
Q 048667          233 IKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLV  312 (425)
Q Consensus       233 i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~  312 (425)
                      |..++.++++||+|||+.+++|++++|+.||++|+++++||+++++.+..++.+++.+||||+|||+|+||++|++|...
T Consensus       315 i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~  394 (534)
T PLN03018        315 IKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVP  394 (534)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccC
Confidence            99999999999999999999999999999999999999999999987777899999999999999999999999999987


Q ss_pred             eeeeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCc-----cCCccceeecCCCCCCCCChHH
Q 048667          313 PRLARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDV-----VGHNFELLPFGAGRRMCAGYAL  387 (425)
Q Consensus       313 ~R~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~-----~~~~~~~~~Fg~G~~~C~G~~l  387 (425)
                      +|.+.+|++++||.|||||.|.++.|++||||++|+||++|+||||++++...     ...+..|+|||+|+|.|||++|
T Consensus       395 ~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~l  474 (534)
T PLN03018        395 PHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKV  474 (534)
T ss_pred             CcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHH
Confidence            79999999999999999999999999999999999999999999999653211     1245789999999999999999


Q ss_pred             HHHHHHHHHHHHHhhceeecCCC
Q 048667          388 GLKTVQSTLANLLHGFEWKLPGD  410 (425)
Q Consensus       388 a~~~~~~~l~~ll~~~~~~~~~~  410 (425)
                      |.+|+++++++|+++|+|++.++
T Consensus       475 A~~e~~~~la~ll~~f~~~~~~~  497 (534)
T PLN03018        475 GTIMMVMMLARFLQGFNWKLHQD  497 (534)
T ss_pred             HHHHHHHHHHHHHHhceEEeCCC
Confidence            99999999999999999998765


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.4e-69  Score=513.60  Aligned_cols=399  Identities=25%  Similarity=0.437  Sum_probs=319.8

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|++++|+|+||+++++|+.++...|+.++.......+..++..+++.++|+.|+++||.+.+++|+...++.+.+
T Consensus        36 ~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~  115 (466)
T PLN02655         36 YTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRD  115 (466)
T ss_pred             EEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHH
Confidence            57899999999999999999999988888888875443333332233345555699999999987678899888899999


Q ss_pred             hhHHHHHHHHHHHHhhcCC-CCCceehHHHHHHHHHHHHHHHHhcccccccccCCC-CC---hhHHHHHHHHHHHHhccc
Q 048667           81 MRVEERKAFLCKLYKSSSN-SSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNV-VT---PKEFTEIVDELFLISGVL  155 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~-~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~  155 (425)
                      .+.+.++.+++.+.+.... .++++|+.+++..+++|+++.++||.+++....... ..   ...+...+..+.......
T Consensus       116 ~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (466)
T PLN02655        116 TRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEV  195 (466)
T ss_pred             HHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCc
Confidence            9999999999988755331 356899999999999999999999998775321100 00   122333344444333333


Q ss_pred             cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHH
Q 048667          156 DIGDAIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKA  235 (425)
Q Consensus       156 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~  235 (425)
                      .+...+|++.+++.....+...+....+.+++..++++++++...    .....|+++.|+...      ..+++++|.+
T Consensus       196 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~d~l~~ll~~~------~~ls~~~i~~  265 (466)
T PLN02655        196 DWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR----GEERDCYLDFLLSEA------THLTDEQLMM  265 (466)
T ss_pred             chhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCCcccHHHHHHhcc------CCCCHHHHHH
Confidence            344567776665432223334444455567888888877765422    123468999999763      2689999999


Q ss_pred             HHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceee
Q 048667          236 SNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRL  315 (425)
Q Consensus       236 ~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~  315 (425)
                      ++.++++||+|||+++++|++++|++||++|+++++|++++++++. ++++++++||||+|||+|+||++||++...+|.
T Consensus       266 ~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~  344 (466)
T PLN02655        266 LVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRF  344 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcc
Confidence            9999999999999999999999999999999999999999988655 899999999999999999999999999987899


Q ss_pred             eccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHH
Q 048667          316 ARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQST  395 (425)
Q Consensus       316 ~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~  395 (425)
                      +.+|++++|+.|||||.|+++.+++||||++|+||++|+||||++++.. ......++|||+|+|.|||++||.+|++++
T Consensus       345 ~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~  423 (466)
T PLN02655        345 VHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMA  423 (466)
T ss_pred             cCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999976422 123478999999999999999999999999


Q ss_pred             HHHHHhhceeecCCCC
Q 048667          396 LANLLHGFEWKLPGDV  411 (425)
Q Consensus       396 l~~ll~~~~~~~~~~~  411 (425)
                      +++||.+|++++.++.
T Consensus       424 l~~ll~~f~~~~~~~~  439 (466)
T PLN02655        424 IARLVQEFEWRLREGD  439 (466)
T ss_pred             HHHHHHHeEEEeCCCC
Confidence            9999999999997654


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.8e-69  Score=518.81  Aligned_cols=393  Identities=20%  Similarity=0.329  Sum_probs=313.7

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|+.++|+++||+++++|+.++ ..+..++...........+.+++++ +|+.|+++||.+ ++.|++++++.+.+
T Consensus        97 ~~~~~g~~~~vvv~dp~~v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l~~~-~g~~Wk~~Rk~~-~~~f~~~~l~~~~~  173 (516)
T PLN02290         97 FIYWNGTEPRLCLTETELIKELLTKY-NTVTGKSWLQQQGTKHFIGRGLLMA-NGADWYHQRHIA-APAFMGDRLKGYAG  173 (516)
T ss_pred             EEEccCCccEEEECCHHHHHHHHhcC-CCCCCCcchhhhHHHHHhcCCcccc-CchHHHHHHhhc-ccccCHHHHHHHHH
Confidence            57899999999999999999999976 3455555322111111123556555 599999999998 79999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.++++.+++.|.+..+.++.++|+.+++..+++|++++++||.+++..        .++...+..+............
T Consensus       174 ~i~~~~~~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  245 (516)
T PLN02290        174 HMVECTKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKG--------KQIFHLLTVLQRLCAQATRHLC  245 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccc--------hHHHHHHHHHHHHHHHhhhhhc
Confidence            99999999999998654313357999999999999999999999987532        2333333333322221111123


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCC-cccccccHHHHHHHHHH
Q 048667          161 IPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDP-TLEVKLERDHIKASNQD  239 (425)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~~~~~  239 (425)
                      +|++.+++ .+..++..+..+.+.+++.+.|+++++..+.+. ......|+++.|++...+. ..+..++++++.+++.+
T Consensus       246 ~p~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~  323 (516)
T PLN02290        246 FPGSRFFP-SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGR-SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKT  323 (516)
T ss_pred             CchhhhCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHH
Confidence            45544443 233455666778888999999998876543211 1123579999999865432 11235889999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeeccC
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLARKN  319 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~  319 (425)
                      +++||+|||+++++|++++|++||++|+|+++|++++++++ .++++++++||||+|||+||||++|+++. ++|.+.+|
T Consensus       324 ~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d  401 (516)
T PLN02290        324 FFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFED  401 (516)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCC
Confidence            99999999999999999999999999999999999999865 78999999999999999999999999997 47999999


Q ss_pred             eeeeceeeCCCCEEEEechhccCCCCCC-CCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHHHH
Q 048667          320 CKLDGYDIIKNSRVIINVWAIGRDPTIW-EKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTLAN  398 (425)
Q Consensus       320 ~~i~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~  398 (425)
                      ++++|+.|||||.|.++.|++||||++| +||++|+||||++...   .....|+|||.|+|.|||++||++|++++++.
T Consensus       402 ~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~  478 (516)
T PLN02290        402 IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAM  478 (516)
T ss_pred             eeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999 8999999999995421   23457999999999999999999999999999


Q ss_pred             HHhhceeecCCCC
Q 048667          399 LLHGFEWKLPGDV  411 (425)
Q Consensus       399 ll~~~~~~~~~~~  411 (425)
                      ||++|+++++++.
T Consensus       479 ll~~f~~~~~~~~  491 (516)
T PLN02290        479 LISKFSFTISDNY  491 (516)
T ss_pred             HHHhceEeeCCCc
Confidence            9999999987663


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.8e-70  Score=515.57  Aligned_cols=393  Identities=27%  Similarity=0.432  Sum_probs=317.3

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccc-cccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALL-AGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~   79 (425)
                      |+.|+|+.++|+++||+.+++|+..+...+.+.+.+. ....+.  |.++++++ |+.|+++||++ .++|+.+.++.+.
T Consensus        74 ~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~l--G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~  149 (497)
T KOG0157|consen   74 FKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWL--GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFV  149 (497)
T ss_pred             hhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHh--cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHH
Confidence            5789999999999999999999976555555555554 333322  46888887 99999999998 7999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           80 YMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                      +.+.+.+..++..+.....  ++.+|+++.++++++|+++..+||......+   .....++..++.+.......   ..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~tld~i~~~~~G~~~~~~~---~~~~~~~~~a~~~~~~~~~~---~~  221 (497)
T KOG0157|consen  150 PVFIESSLILLLLLELAAS--GEEVDLQDLLKRLTLDIICKTAMGPESLDAE---GPELFEYVQAFDDLTELISK---RI  221 (497)
T ss_pred             HHHHHHHHHHHHHHHHhhc--CCeEcHHHHHHHHHHHHHHHHhcCCcccccc---CCcccHHHHHHHHHHHHHHH---HH
Confidence            9999999998888877433  3339999999999999999999992221111   11224666666655544332   23


Q ss_pred             ccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc-cCCCCcHHHHHHhhcCCCcccccccHHHHHHHH
Q 048667          160 AIP-WLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVK-EHGANDMVDVLLQLADDPTLEVKLERDHIKASN  237 (425)
Q Consensus       160 ~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~  237 (425)
                      ..| +..++...+..++..++.+.+.++++++|++++++....... .....|+++.+.....     ..+++++|++++
T Consensus       222 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v  296 (497)
T KOG0157|consen  222 NLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEV  296 (497)
T ss_pred             cCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHH
Confidence            345 444433333678899999999999999999999887543111 1456788886333222     389999999999


Q ss_pred             HHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcc-cccccccCChhHHHHHHhhccCCCCccccceeee
Q 048667          238 QDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKW-VEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLA  316 (425)
Q Consensus       238 ~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~  316 (425)
                      .++++||+|||+++++|+++.|+.||++|+++++|+.++++++.. ......++|+||++||+||||||||+|+.. |.+
T Consensus       297 ~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~  375 (497)
T KOG0157|consen  297 DTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKA  375 (497)
T ss_pred             HHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-ccc
Confidence            999999999999999999999999999999999999999985432 233334469999999999999999999987 999


Q ss_pred             ccCeee-eceeeCCCCEEEEechhccCCCCCCC-CCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHH
Q 048667          317 RKNCKL-DGYDIIKNSRVIINVWAIGRDPTIWE-KPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQS  394 (425)
Q Consensus       317 ~~~~~i-~g~~ip~Gt~v~~~~~~~~~d~~~~~-dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~  394 (425)
                      .+|+++ +||.||||+.|.+++|++|||+++|+ ||++|+||||+++......++++|+|||+|+|.|+|++||++|||+
T Consensus       376 ~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv  455 (497)
T KOG0157|consen  376 TKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKV  455 (497)
T ss_pred             CCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHH
Confidence            999999 58999999999999999999999995 9999999999975433345679999999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCC
Q 048667          395 TLANLLHGFEWKLPGDV  411 (425)
Q Consensus       395 ~l~~ll~~~~~~~~~~~  411 (425)
                      ++++||++|+|++..+.
T Consensus       456 ~l~~ll~~f~~~~~~~~  472 (497)
T KOG0157|consen  456 VLAHLLRRFRIEPVGGD  472 (497)
T ss_pred             HHHHHHHheEEEecCCC
Confidence            99999999999988764


No 18 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.7e-69  Score=519.97  Aligned_cols=391  Identities=21%  Similarity=0.359  Sum_probs=307.4

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|++++|+|+||+.+++|+.++...|.+++........  .+.++++. +|+.|+++|+.+ .++|+.+.++.+.+
T Consensus       168 ~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l~~~-dge~wr~rRr~l-~p~Fs~~~v~~l~~  243 (633)
T PLN02738        168 FRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGLIPA-DGEIWRVRRRAI-VPALHQKYVAAMIS  243 (633)
T ss_pred             EEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCceecC-CcHHHHHHHHhc-cHhhhHHHHHHHHH
Confidence            578889999999999999999999776667766433222221  23455544 599999999998 79999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+.++.++++|.+... .++++|+...+..+++|+|+.++||.+++.....     ..+...+..............+
T Consensus       244 ~i~~~v~~L~~~L~~~~~-~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  317 (633)
T PLN02738        244 LFGQASDRLCQKLDAAAS-DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-----TGIVEAVYTVLREAEDRSVSPI  317 (633)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-----hHHHHHHHHHHHHHHHHhhcch
Confidence            999999999999987654 5779999999999999999999999998753311     2343333333322111111111


Q ss_pred             ccc----cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh------hccCCCCcHHHHHHhhcCCCcccccccH
Q 048667          161 IPW----LSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKW------VKEHGANDMVDVLLQLADDPTLEVKLER  230 (425)
Q Consensus       161 ~P~----l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~~~dll~~ll~~~~~~~~~~~l~~  230 (425)
                      .+|    +..++  ...++..+..+.+..+...+++.+++..++..      .....+.|+++.|++..      ..+++
T Consensus       318 ~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~------~~ls~  389 (633)
T PLN02738        318 PVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG------DDVSS  389 (633)
T ss_pred             hhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC------CCCCH
Confidence            222    22221  11344555566666666666665543321110      00123468999999752      26899


Q ss_pred             HHHHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccc
Q 048667          231 DHIKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATL  310 (425)
Q Consensus       231 ~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~  310 (425)
                      ++|.++++++++||+|||+.+|+|++|+|++||++|+||++|+++++++ ..++++++++||||+|||+|+|||+|++|.
T Consensus       390 ~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~  468 (633)
T PLN02738        390 KQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPV  468 (633)
T ss_pred             HHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccc
Confidence            9999999999999999999999999999999999999999999999884 568999999999999999999999999999


Q ss_pred             cceeeeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCc--CccCCccceeecCCCCCCCCChHHH
Q 048667          311 LVPRLARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEI--DVVGHNFELLPFGAGRRMCAGYALG  388 (425)
Q Consensus       311 ~~~R~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~--~~~~~~~~~~~Fg~G~~~C~G~~la  388 (425)
                      .. |.+.+|.+++||.|||||.|.++.|.+||||++|+||++|+||||+....  +.......|+|||.|+|.|+|++||
T Consensus       469 ~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA  547 (633)
T PLN02738        469 LI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFA  547 (633)
T ss_pred             cc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHH
Confidence            75 88999999999999999999999999999999999999999999985321  1123457899999999999999999


Q ss_pred             HHHHHHHHHHHHhhceeecCCCC
Q 048667          389 LKTVQSTLANLLHGFEWKLPGDV  411 (425)
Q Consensus       389 ~~~~~~~l~~ll~~~~~~~~~~~  411 (425)
                      ++|++++|+.|+++|+|++.++.
T Consensus       548 ~~El~l~LA~Llr~F~~el~~~~  570 (633)
T PLN02738        548 SFENVVATAMLVRRFDFQLAPGA  570 (633)
T ss_pred             HHHHHHHHHHHHHhCeeEeCCCC
Confidence            99999999999999999998764


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.4e-69  Score=514.04  Aligned_cols=392  Identities=18%  Similarity=0.272  Sum_probs=305.3

Q ss_pred             eeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhh--hhh
Q 048667            3 LKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAE--FEY   80 (425)
Q Consensus         3 ~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~--~~~   80 (425)
                      +|+|+.++|+|+||+++++|+.++...|.+++.......  ..+.++++++ |+.|+++||++ +|+|+...++.  +.+
T Consensus        75 ~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~~--~~g~gl~~~~-g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~  150 (500)
T PLN02169         75 PWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIFD--VLGEGILTVD-FELWEDLRKSN-HALFHNQDFIELSLSS  150 (500)
T ss_pred             eccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHHH--hhcCcccccC-cHHHHHHHHHH-HHHhhhHHHHHHHHHH
Confidence            688999999999999999999987667777654322221  2346777765 99999999999 79999987764  346


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+.++.+++.+.+... ++.++|+.+.+.++++|++++++||.+.+..+..  .....+..++........   ....
T Consensus       151 ~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~  224 (500)
T PLN02169        151 NKSKLKEGLVPFLDNAAH-ENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHF  224 (500)
T ss_pred             HHHHHHHHHHHHHHHHHh-cCCeEeHHHHHHHHHHHHHHhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHh
Confidence            677888888888876544 5678999999999999999999999987643211  011345555444332211   1123


Q ss_pred             cccccc----ccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCC-cccccccHHHHHH
Q 048667          161 IPWLSF----LDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDP-TLEVKLERDHIKA  235 (425)
Q Consensus       161 ~P~l~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~  235 (425)
                      .|++.+    +.+.+..++..++.+.+.+++.++|++++++..++...+....|+++.|++....+ ..+..+++++|.+
T Consensus       225 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~  304 (500)
T PLN02169        225 KPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRD  304 (500)
T ss_pred             ccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHH
Confidence            343221    11234467778889999999999999887653211001122468999999764321 1012478899999


Q ss_pred             HHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceee
Q 048667          236 SNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRL  315 (425)
Q Consensus       236 ~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~  315 (425)
                      ++.++++||+|||+++++|++|+|+.||++|+|+++|+++++      +++++++||||+|||+|+||||||+|... |.
T Consensus       305 ~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~  377 (500)
T PLN02169        305 VIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KA  377 (500)
T ss_pred             HHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-ee
Confidence            999999999999999999999999999999999999999873      67899999999999999999999999987 66


Q ss_pred             eccC-eeeeceeeCCCCEEEEechhccCCCCCC-CCCCCCCCCCCCCCCcCcc-CCccceeecCCCCCCCCChHHHHHHH
Q 048667          316 ARKN-CKLDGYDIIKNSRVIINVWAIGRDPTIW-EKPDEFCPERFIGKEIDVV-GHNFELLPFGAGRRMCAGYALGLKTV  392 (425)
Q Consensus       316 ~~~~-~~i~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~p~R~~~~~~~~~-~~~~~~~~Fg~G~~~C~G~~la~~~~  392 (425)
                      +.+| +.++|+.|||||.|.++.|++||||++| +||++|+||||++++.+.. .++..|+|||+|+|+|||++||++|+
T Consensus       378 ~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~  457 (500)
T PLN02169        378 PAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQM  457 (500)
T ss_pred             cCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHH
Confidence            6555 5559999999999999999999999999 8999999999997543211 23679999999999999999999999


Q ss_pred             HHHHHHHHhhceeecCCCC
Q 048667          393 QSTLANLLHGFEWKLPGDV  411 (425)
Q Consensus       393 ~~~l~~ll~~~~~~~~~~~  411 (425)
                      ++++++||++|+|+++++.
T Consensus       458 k~~la~ll~~f~~~~~~~~  476 (500)
T PLN02169        458 KIVALEIIKNYDFKVIEGH  476 (500)
T ss_pred             HHHHHHHHHHCEEEEcCCC
Confidence            9999999999999997653


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.4e-69  Score=517.78  Aligned_cols=399  Identities=31%  Similarity=0.524  Sum_probs=330.8

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccc--cccCCceeeeccCchhHHHHHHHHhhccCCHH-HHhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKH--ANYNYSVLATAPYGPYLRQARKIYITELLNPK-RLAE   77 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~-~l~~   77 (425)
                      |++++|++++|+|+||+++++|+..+...++.++.......  ....+.++++.. ++.|+++|+.+ .+.|+.. .+ .
T Consensus        37 ~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~R~~~-~~~~~~~~~~-~  113 (463)
T PF00067_consen   37 FRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGPFGGKGLFFSD-GERWRRQRRLL-APAFSSKKIL-K  113 (463)
T ss_dssp             EEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHHHTTTSSTTSS-HHHHHHHHHHH-HHHHSHHHHH-H
T ss_pred             EEEeEecccccccccchhhcccccccccccccccccccccccccccccccccccc-ccccccccccc-cccccccccc-c
Confidence            67999999999999999999999988766776644332221  123456666665 89999999999 6888888 66 8


Q ss_pred             hhhhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcc--c
Q 048667           78 FEYMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGV--L  155 (425)
Q Consensus        78 ~~~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  155 (425)
                      +.+.+.+.++.+++.|.+... .++.+|+.++++.+++|++++++||.+++..+.   ....++.+.+..+......  .
T Consensus       114 ~~~~i~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~d~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  189 (463)
T PF00067_consen  114 LEPLIDEEAEELIDQLRKKAG-SSGPVDLFDWLRRFALDVIGRVLFGKDFGSLDD---EDFEEFLEAFDELFELLSNFFW  189 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SESEEEHHHHHHHHHHHHHHHHHHSSHHHGTTH---HHHHHHHHHHHHHHHHHHSHHH
T ss_pred             ccccccccccccccccccccc-ccceeeeecccccccccccccccccceeeeccc---cccccccccccccccccccccc
Confidence            999999999999999998765 444799999999999999999999999874331   0123455666665543322  1


Q ss_pred             cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhc-CCCcccccccHHHHH
Q 048667          156 DIGDAIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLA-DDPTLEVKLERDHIK  234 (425)
Q Consensus       156 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~-~~~~~~~~l~~~~i~  234 (425)
                      .+...+||+.+++ ....++..++.+.+.+++.+++++++++...+   .....|+++.|+... +.++ +..++++++.
T Consensus       190 ~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~  264 (463)
T PF00067_consen  190 NLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDDG---DESRRDLLDSLLQASSDSDG-PSGLSDEEIA  264 (463)
T ss_dssp             HHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS---SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHH
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccccccc---cccccccccccccccccccc-cccccccccc
Confidence            3445667666553 34566777788899999999999998877331   246789999999987 3332 2479999999


Q ss_pred             HHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCcccccee
Q 048667          235 ASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPR  314 (425)
Q Consensus       235 ~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R  314 (425)
                      +++.++++||+|||+.+++|++++|++||++|++|++|++++.+++..++.+++++||||+|||+|+||++|+++..++|
T Consensus       265 ~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R  344 (463)
T PF00067_consen  265 AELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPR  344 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999997777899999999999999999999999999966679


Q ss_pred             eeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHH
Q 048667          315 LARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQS  394 (425)
Q Consensus       315 ~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~  394 (425)
                      .+.+|++++|+.|||||.|.++.+++|+||++|+||++|+||||++.+......+..|+|||.|+|.|||++||++|+++
T Consensus       345 ~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~  424 (463)
T PF00067_consen  345 VATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKV  424 (463)
T ss_dssp             EESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987642235788999999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCC
Q 048667          395 TLANLLHGFEWKLPGDV  411 (425)
Q Consensus       395 ~l~~ll~~~~~~~~~~~  411 (425)
                      ++++||++||+++.++.
T Consensus       425 ~la~ll~~f~~~~~~~~  441 (463)
T PF00067_consen  425 FLAKLLRRFDFELVPGS  441 (463)
T ss_dssp             HHHHHHHHEEEEESTTS
T ss_pred             HHHHHHHhCEEEECCCC
Confidence            99999999999997654


No 21 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.1e-68  Score=505.43  Aligned_cols=378  Identities=19%  Similarity=0.265  Sum_probs=299.3

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhh-hh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAE-FE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~-~~   79 (425)
                      |++++|++++|+++||+++++|+.+++..|+.+........  .++.++++. +|+.|+++|+.+ .+.|++.+++. +.
T Consensus        79 ~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~~--~g~~~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~  154 (490)
T PLN02500         79 YRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGI--LGKWSMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLL  154 (490)
T ss_pred             ccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHHH--hCccccccc-CCHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            57899999999999999999999977666654422211111  122355555 599999999998 69999998887 56


Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           80 YMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                      +.+.+.+..+++.|.     .++.+|+.+.+..+++|++++++||.+.+..+      ...+...+..+......  ...
T Consensus       155 ~~~~~~~~~~~~~~~-----~~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~~------~~~~~~~~~~~~~~~~~--~~~  221 (490)
T PLN02500        155 KEVERHTLLVLDSWK-----ENSTFSAQDEAKKFTFNLMAKHIMSMDPGEEE------TEQLKKEYVTFMKGVVS--APL  221 (490)
T ss_pred             HHHHHHHHHHHHHhC-----CCCCEEehHHHHHHHHHHHHHHHhCCCCCchH------HHHHHHHHHHHHhhhhc--chh
Confidence            777788888888774     34579999999999999999999998764321      12333333333221111  001


Q ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHH
Q 048667          160 AIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQD  239 (425)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  239 (425)
                      .+|+.       ..++..+..+.+.+++.+++++++++.+.+. ......|+++.|++.       ..++++++++++.+
T Consensus       222 ~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~  286 (490)
T PLN02500        222 NFPGT-------AYRKALKSRATILKFIERKMEERIEKLKEED-ESVEEDDLLGWVLKH-------SNLSTEQILDLILS  286 (490)
T ss_pred             cCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccc-CCCCcchHHHHHHhc-------cCCCHHHHHHHHHH
Confidence            12221       1245556778888899999988876543221 112356899999973       15899999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhc-----CCcccccccccCChhHHHHHHhhccCCCCcccccee
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIG-----RNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPR  314 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R  314 (425)
                      +++||+|||+++++|++++|++||++|+|+++|++++++     ++..++++++++||||+|||+|+||++|++|.. +|
T Consensus       287 ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R  365 (490)
T PLN02500        287 LLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HR  365 (490)
T ss_pred             HHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-ee
Confidence            999999999999999999999999999999999999864     234589999999999999999999999999996 69


Q ss_pred             eeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCcc------CCccceeecCCCCCCCCChHHH
Q 048667          315 LARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVV------GHNFELLPFGAGRRMCAGYALG  388 (425)
Q Consensus       315 ~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~------~~~~~~~~Fg~G~~~C~G~~la  388 (425)
                      .+.+|++++||.|||||.|.++.|++||||++|+||++|+||||++++....      ..+..|+|||+|+|.|||++||
T Consensus       366 ~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A  445 (490)
T PLN02500        366 KALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELA  445 (490)
T ss_pred             EeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHH
Confidence            9999999999999999999999999999999999999999999996532111      2457899999999999999999


Q ss_pred             HHHHHHHHHHHHhhceeecCCCC
Q 048667          389 LKTVQSTLANLLHGFEWKLPGDV  411 (425)
Q Consensus       389 ~~~~~~~l~~ll~~~~~~~~~~~  411 (425)
                      .+|+++++++||++|+|++.++.
T Consensus       446 ~~el~~~la~ll~~f~~~~~~~~  468 (490)
T PLN02500        446 KLEMAVFIHHLVLNFNWELAEAD  468 (490)
T ss_pred             HHHHHHHHHHHHhccEEEEcCCC
Confidence            99999999999999999987654


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.3e-67  Score=506.72  Aligned_cols=398  Identities=19%  Similarity=0.253  Sum_probs=303.7

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccc-cccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAG-KHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~   79 (425)
                      |++++|++++|+++||+++++|+.++...|.+++..... ...  .+.+++. .+|+.|+++||.+ ++.|+..+++.+.
T Consensus        68 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~--~g~~l~~-~~g~~w~~~Rr~l-~~~fs~~~l~~~~  143 (516)
T PLN03195         68 VVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL--LGDGIFN-VDGELWRKQRKTA-SFEFASKNLRDFS  143 (516)
T ss_pred             EEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH--hcCeeec-cCcHHHHHHHHhc-chhhhHHHHHHHH
Confidence            578999999999999999999998765556555332111 111  2345544 4699999999998 8999999999999


Q ss_pred             hhh-HHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccc
Q 048667           80 YMR-VEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIG  158 (425)
Q Consensus        80 ~~i-~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (425)
                      +.+ .+.++.+++.+.+... +++++|+.+++..+++|+++.++||.+++..+...  ....+...+.........   .
T Consensus       144 ~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~  217 (516)
T PLN03195        144 TVVFREYSLKLSSILSQASF-ANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSL--PENPFAQAFDTANIIVTL---R  217 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cCCeEcHHHHHHHHHHHHHHHHHhCCCccccccCC--CccHHHHHHHHHHHHHHH---H
Confidence            876 5667777777765433 45689999999999999999999999887643110  112454444443322111   0


Q ss_pred             ccccc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hccCCCCcHHHHHHhhcCCCcccccccHHHHHH
Q 048667          159 DAIPW--LSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKW-VKEHGANDMVDVLLQLADDPTLEVKLERDHIKA  235 (425)
Q Consensus       159 ~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~  235 (425)
                      ...|+  +.........+...+..+.+.+++.+.+++++++...+. .......|+++.|++...++  +..++++++.+
T Consensus       218 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~  295 (516)
T PLN03195        218 FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRD  295 (516)
T ss_pred             HhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCC--CCCCCHHHHHH
Confidence            11121  111111122344556777888888888888876542210 01123568999999765432  33699999999


Q ss_pred             HHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC--------------------CcccccccccCChhHH
Q 048667          236 SNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGR--------------------NKWVEEKDIANLPYVQ  295 (425)
Q Consensus       236 ~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~  295 (425)
                      ++.++++||+|||+++++|++|+|++||++|+||++|+++++++                    +..++++++++||||+
T Consensus       296 ~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~  375 (516)
T PLN03195        296 IVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLH  375 (516)
T ss_pred             HHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHH
Confidence            99999999999999999999999999999999999999987642                    2457899999999999


Q ss_pred             HHHHhhccCCCCccccceeeeccCee-eeceeeCCCCEEEEechhccCCCCCC-CCCCCCCCCCCCCCCcCccCCcccee
Q 048667          296 AIVKEVMRLHPAATLLVPRLARKNCK-LDGYDIIKNSRVIINVWAIGRDPTIW-EKPDEFCPERFIGKEIDVVGHNFELL  373 (425)
Q Consensus       296 a~i~E~lRl~p~~~~~~~R~~~~~~~-i~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~p~R~~~~~~~~~~~~~~~~  373 (425)
                      |||+|+||++||+|... |.+.+|.. ++|+.|||||.|.++.|++||||++| +||++|+||||++++......+..|+
T Consensus       376 Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~  454 (516)
T PLN03195        376 AVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFT  454 (516)
T ss_pred             HHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEe
Confidence            99999999999999986 65666555 49999999999999999999999999 99999999999964321123456899


Q ss_pred             ecCCCCCCCCChHHHHHHHHHHHHHHHhhceeecCCCC
Q 048667          374 PFGAGRRMCAGYALGLKTVQSTLANLLHGFEWKLPGDV  411 (425)
Q Consensus       374 ~Fg~G~~~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~  411 (425)
                      |||+|+|+|+|++||++|++++++.|+++|++++.++.
T Consensus       455 pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~  492 (516)
T PLN03195        455 AFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH  492 (516)
T ss_pred             ccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC
Confidence            99999999999999999999999999999999987543


No 23 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.5e-66  Score=494.89  Aligned_cols=393  Identities=21%  Similarity=0.324  Sum_probs=312.2

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|++++|+++||+++++|+.+.+..|.+++........  .+.+++++ +|+.|+++||.+ ++.|+..+++.+.+
T Consensus        53 ~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~--~~~~i~~~-~g~~wk~~Rk~l-~~~f~~~~l~~~~~  128 (489)
T PLN02936         53 YRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL--FGSGFAIA-EGELWTARRRAV-VPSLHRRYLSVMVD  128 (489)
T ss_pred             EEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH--hcCccccC-CchHHHHHHHhh-cCccCHHHHHHHHH
Confidence            578999999999999999999998776778776543322222  23455555 599999999998 79999988888754


Q ss_pred             -hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           81 -MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        81 -~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                       ++.++++.+++.+.+... +++++|+.++++.+++|+++.++||.+++.....     .++...+......... ....
T Consensus       129 ~~~~~~~~~l~~~l~~~~~-~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~  201 (489)
T PLN02936        129 RVFCKCAERLVEKLEPVAL-SGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLTTD-----SPVIQAVYTALKEAET-RSTD  201 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHcCCCccccccC-----cHHHHHHHHHHHHHHH-hhhc
Confidence             788899999999987654 5678999999999999999999999998764311     2344444443322211 1222


Q ss_pred             ccccccc--cc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh----c---cCCCCcHHHHHHhhcCCCccccccc
Q 048667          160 AIPWLSF--LD-LQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWV----K---EHGANDMVDVLLQLADDPTLEVKLE  229 (425)
Q Consensus       160 ~~P~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~---~~~~~dll~~ll~~~~~~~~~~~l~  229 (425)
                      .+|++.+  +. .....++..++.+.+.+++.+.++++++..+.+..    +   .....|+++.|+...      ..++
T Consensus       202 ~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~  275 (489)
T PLN02936        202 LLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVS  275 (489)
T ss_pred             cchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhcc------ccCC
Confidence            3443221  00 01124566777888888888888887765432110    0   123468999998753      2588


Q ss_pred             HHHHHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCcc
Q 048667          230 RDHIKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAAT  309 (425)
Q Consensus       230 ~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  309 (425)
                      +++|.+++.++++||+|||+++++|++|+|++||++|+++++|++++++. ..++++++++||||+|||+||||++||+|
T Consensus       276 ~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~  354 (489)
T PLN02936        276 SVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPP  354 (489)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcc
Confidence            99999999999999999999999999999999999999999999999875 44789999999999999999999999999


Q ss_pred             ccceeeeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcC--ccCCccceeecCCCCCCCCChHH
Q 048667          310 LLVPRLARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEID--VVGHNFELLPFGAGRRMCAGYAL  387 (425)
Q Consensus       310 ~~~~R~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~--~~~~~~~~~~Fg~G~~~C~G~~l  387 (425)
                      ...+|.+.+|+.++|+.||+||.|+++.+++||||++|+||++|+||||+.++..  ....+..|+|||.|+|.|||++|
T Consensus       355 ~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~l  434 (489)
T PLN02936        355 VLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQF  434 (489)
T ss_pred             cccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHH
Confidence            9987777888888999999999999999999999999999999999999964321  12234689999999999999999


Q ss_pred             HHHHHHHHHHHHHhhceeecCCCC
Q 048667          388 GLKTVQSTLANLLHGFEWKLPGDV  411 (425)
Q Consensus       388 a~~~~~~~l~~ll~~~~~~~~~~~  411 (425)
                      |++|++++++.|+++|+++++++.
T Consensus       435 a~~~~~~~la~ll~~f~~~~~~~~  458 (489)
T PLN02936        435 ALLEAIVALAVLLQRLDLELVPDQ  458 (489)
T ss_pred             HHHHHHHHHHHHHHhCeEEecCCC
Confidence            999999999999999999998653


No 24 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.6e-66  Score=493.89  Aligned_cols=384  Identities=21%  Similarity=0.277  Sum_probs=302.1

Q ss_pred             eeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccc-cccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhh--h
Q 048667            3 LKFGLDTVVVGSSAQVAELILKTHDTSFASRPALL-AGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEF--E   79 (425)
Q Consensus         3 ~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~--~   79 (425)
                      ++.++.  |+++||+++++|+..+...|.+..... .....  .+.+++.+ +|+.|+++||.+ ++.|+.++++.+  .
T Consensus        80 ~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~gi~~~-~g~~wk~~Rk~l-~~~fs~~~l~~~~~~  153 (502)
T PLN02426         80 VHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRGIFNV-DGDSWRFQRKMA-SLELGSVSIRSYAFE  153 (502)
T ss_pred             EecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCceeec-CcHHHHHHHHHh-HhhhhhHHHHHHHHH
Confidence            444443  899999999999997766777654332 11111  24566655 599999999998 899999998876  3


Q ss_pred             hhhHHHHHHHHHHHHhhcCC-CCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccc
Q 048667           80 YMRVEERKAFLCKLYKSSSN-SSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIG  158 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~-~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (425)
                      +.+.+.++.+++.+.+..+. ++.++|+.++++++++|+++.++||.+++..+..  ....++..++..+...... ...
T Consensus       154 ~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~--~~~~~~~~~~~~~~~~~~~-~~~  230 (502)
T PLN02426        154 IVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELS--LPISEFADAFDTASKLSAE-RAM  230 (502)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCC--CCccHHHHHHHHHHHHHHH-HHh
Confidence            67778888888888765421 3467999999999999999999999998764311  1124566655554332211 111


Q ss_pred             cccccccc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHH
Q 048667          159 DAIPWLSF---LDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKA  235 (425)
Q Consensus       159 ~~~P~l~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~  235 (425)
                      ..+|++.+   +.+.+..++..+..+.+.+++.++|+++++..      .....|+++.|++.        ..+++++.+
T Consensus       231 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~------~~~~~dll~~ll~~--------~~~~~~l~~  296 (502)
T PLN02426        231 AASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG------FSASKDLLSRFMAS--------INDDKYLRD  296 (502)
T ss_pred             cchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc------cCCcchHHHHHHhc--------CCCHHHHHH
Confidence            22233221   11123346677888889999999998887542      12357999999975        236789999


Q ss_pred             HHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC-cccccccccCChhHHHHHHhhccCCCCcccccee
Q 048667          236 SNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRN-KWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPR  314 (425)
Q Consensus       236 ~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R  314 (425)
                      ++.++++||+|||+++|+|++|+|++||++|+||++|++++++.+ ..++++++++||||+|||+|+||++||+|... |
T Consensus       297 ~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~-r  375 (502)
T PLN02426        297 IVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDS-K  375 (502)
T ss_pred             HHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcc-e
Confidence            999999999999999999999999999999999999999988753 36899999999999999999999999999986 9


Q ss_pred             eeccCeee-eceeeCCCCEEEEechhccCCCCCC-CCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHH
Q 048667          315 LARKNCKL-DGYDIIKNSRVIINVWAIGRDPTIW-EKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTV  392 (425)
Q Consensus       315 ~~~~~~~i-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~  392 (425)
                      .+.+|.++ +|+.|||||.|.++.|++||||++| +||++|+||||++++......+..++|||+|+|.|+|+++|++|+
T Consensus       376 ~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~  455 (502)
T PLN02426        376 FAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEM  455 (502)
T ss_pred             eeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHH
Confidence            99888777 9999999999999999999999999 999999999999743111224568999999999999999999999


Q ss_pred             HHHHHHHHhhceeecCCC
Q 048667          393 QSTLANLLHGFEWKLPGD  410 (425)
Q Consensus       393 ~~~l~~ll~~~~~~~~~~  410 (425)
                      +++++.|+++|++++.++
T Consensus       456 ~~~la~ll~~f~~~~~~~  473 (502)
T PLN02426        456 KSVAVAVVRRFDIEVVGR  473 (502)
T ss_pred             HHHHHHHHHHceEEEecC
Confidence            999999999999998643


No 25 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.4e-65  Score=485.86  Aligned_cols=373  Identities=19%  Similarity=0.260  Sum_probs=297.1

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhh-hh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAE-FE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~-~~   79 (425)
                      |++|+|++++|+++||+++++|+.++...|..+........  .++.+++.. +|+.|+++|+.+ .++|++..++. +.
T Consensus        67 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~--lg~~~~~~~-~g~~w~~~R~~l-~~~~~~~~~~~~~~  142 (463)
T PLN02774         67 FKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI--LGTCNIAAV-HGSTHRYMRGSL-LSLISPTMIRDHLL  142 (463)
T ss_pred             ccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH--hCccchhhc-CCHHHHHHHHHH-HHhcCHHHHHHHHH
Confidence            67899999999999999999999876655543322222121  223345544 699999999998 79999999876 78


Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           80 YMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                      +.+.+.+.+++++|.     .++++|+.+.+..+++++++.++||...+...       ..+...+..+   ....   .
T Consensus       143 ~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~---~~~~---~  204 (463)
T PLN02774        143 PKIDEFMRSHLSGWD-----GLKTIDIQEKTKEMALLSALKQIAGTLSKPIS-------EEFKTEFFKL---VLGT---L  204 (463)
T ss_pred             HHHHHHHHHHHHhhC-----CCCCEEeeHHHHHHHHHHHHHHHcCCCChHHH-------HHHHHHHHHH---hccc---c
Confidence            999988888888874     34579999999999999999999997653211       2222222221   1110   0


Q ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHH
Q 048667          160 AIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQD  239 (425)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  239 (425)
                      .+|.  +++ ....++..++.+.+.+++.+.|++++++.       ....|+++.|++...+   +..+++++|.+++.+
T Consensus       205 ~~~~--~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~  271 (463)
T PLN02774        205 SLPI--DLP-GTNYRSGVQARKNIVRMLRQLIQERRASG-------ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIIT  271 (463)
T ss_pred             cCCc--CCC-ChhhhHHHHHHHHHHHHHHHHHHHHHhcC-------CCcccHHHHHHhCccC---CCCCCHHHHHHHHHH
Confidence            1221  121 11234556677888888888888876431       3457999999974322   225899999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC---CcccccccccCChhHHHHHHhhccCCCCccccceeee
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGR---NKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLA  316 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~  316 (425)
                      +++||+|||+++++|++++|++||++|+|+++|++++++.   +..++++++++||||+|||+|+||++|+++.. +|.+
T Consensus       272 ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~  350 (463)
T PLN02774        272 ILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKT  350 (463)
T ss_pred             HHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-cccc
Confidence            9999999999999999999999999999999999999863   34689999999999999999999999999976 5999


Q ss_pred             ccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHH
Q 048667          317 RKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTL  396 (425)
Q Consensus       317 ~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l  396 (425)
                      .+|++++|+.||||+.|.++.+.+||||++|+||++|+||||++++.  . ....|+|||+|+|.|||+++|.+|+++++
T Consensus       351 ~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~--~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~l  427 (463)
T PLN02774        351 TQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL--E-SHNYFFLFGGGTRLCPGKELGIVEISTFL  427 (463)
T ss_pred             CCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc--C-CCccccCcCCCCCcCCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999996542  1 12369999999999999999999999999


Q ss_pred             HHHHhhceeecCCCCC
Q 048667          397 ANLLHGFEWKLPGDVK  412 (425)
Q Consensus       397 ~~ll~~~~~~~~~~~~  412 (425)
                      +.||++|+|++.++..
T Consensus       428 a~Ll~~f~~~~~~~~~  443 (463)
T PLN02774        428 HYFVTRYRWEEVGGDK  443 (463)
T ss_pred             HHHHHhceEEECCCCc
Confidence            9999999999987653


No 26 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=7.9e-65  Score=480.27  Aligned_cols=366  Identities=18%  Similarity=0.271  Sum_probs=297.1

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++|+|++++|+++||+++++|+.++...|.  +..........+..++++. +|+.|+++||.+ .+.|++++++.+.+
T Consensus        72 ~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~~~~g~~~l~~~-~g~~w~~~Rk~l-~~~f~~~~l~~~~~  147 (463)
T PLN02196         72 FKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKERMLGKQAIFFH-QGDYHAKLRKLV-LRAFMPDAIRNMVP  147 (463)
T ss_pred             heeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHHHHcCccccccc-CcHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            5789999999999999999999987766553  2222111112233455555 599999999999 69999999999999


Q ss_pred             hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccc
Q 048667           81 MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDA  160 (425)
Q Consensus        81 ~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (425)
                      .+.+.+.++++.|.      ++++|+.++++.+++++++.++||.+.....       ..+......+.    .  ....
T Consensus       148 ~i~~~~~~~~~~~~------~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~-------~~~~~~~~~~~----~--~~~~  208 (463)
T PLN02196        148 DIESIAQESLNSWE------GTQINTYQEMKTYTFNVALLSIFGKDEVLYR-------EDLKRCYYILE----K--GYNS  208 (463)
T ss_pred             HHHHHHHHHHHcCC------CCeEEeHHHHHHHHHHHHHHHHcCCCCchHH-------HHHHHHHHHHh----c--chhc
Confidence            99999999998873      4479999999999999999999998753211       22222221111    1  0112


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHHH
Q 048667          161 IPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQDL  240 (425)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  240 (425)
                      +|+.  ++ ....++..++.+.+.+++.+.|++++++.       ....|+++.+++.      +..++++++.+++.++
T Consensus       209 ~~~~--~p-~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-------~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~  272 (463)
T PLN02196        209 MPIN--LP-GTLFHKSMKARKELAQILAKILSKRRQNG-------SSHNDLLGSFMGD------KEGLTDEQIADNIIGV  272 (463)
T ss_pred             cccc--CC-CccchHHHHHHHHHHHHHHHHHHHHhhcC-------CCcccHHHHHHhc------CCCCCHHHHHHHHHHH
Confidence            3321  11 11234566777888888888888776432       2357899999863      2368999999999999


Q ss_pred             HHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC---CcccccccccCChhHHHHHHhhccCCCCccccceeeec
Q 048667          241 LLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGR---NKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLAR  317 (425)
Q Consensus       241 ~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~  317 (425)
                      ++||+|||+++++|++++|++||++|+++++|++++.+.   +..+++++++++|||+|||+|+||++|+++... |.+.
T Consensus       273 ~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~  351 (463)
T PLN02196        273 IFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAV  351 (463)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeec
Confidence            999999999999999999999999999999999998763   356889999999999999999999999999986 9999


Q ss_pred             cCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHHH
Q 048667          318 KNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTLA  397 (425)
Q Consensus       318 ~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  397 (425)
                      +|+.++||.|||||.|+++.+++||||++|+||++|+||||++..     .+..++|||.|+|.|||+++|++|++++++
T Consensus       352 ~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la  426 (463)
T PLN02196        352 EDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIH  426 (463)
T ss_pred             cccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999632     457899999999999999999999999999


Q ss_pred             HHHhhceeecCCCC
Q 048667          398 NLLHGFEWKLPGDV  411 (425)
Q Consensus       398 ~ll~~~~~~~~~~~  411 (425)
                      .|+++|+|+++++.
T Consensus       427 ~ll~~f~~~~~~~~  440 (463)
T PLN02196        427 HLTTKYRWSIVGTS  440 (463)
T ss_pred             HHHHhcEEEEcCCC
Confidence            99999999997653


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2.3e-64  Score=476.43  Aligned_cols=376  Identities=20%  Similarity=0.278  Sum_probs=295.5

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhh-hh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAE-FE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~-~~   79 (425)
                      |++|+|++++||++||+++++++.++...|+.+... ..... .+..++++. +|+.|+++|+++ ++.|+..++.. +.
T Consensus        48 ~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~-~~~~l-~g~~~~~~~-~g~~wr~~r~~~-~~~~~~~~l~~~~~  123 (452)
T PLN03141         48 FKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK-SLTEL-MGKSSILLI-NGSLQRRVHGLI-GAFLKSPHLKAQIT  123 (452)
T ss_pred             eeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch-hHHHH-hCccccccc-CcHHHHHHHHHH-HHhcCcHHHHHHHH
Confidence            689999999999999999999999887777655321 12222 222345544 599999999998 68888777765 35


Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           80 YMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                      +.+.+.++++++.|.     .++.+|+.+.+..++++++++++||.+.+...       ..+...+..+.....      
T Consensus       124 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~------  185 (452)
T PLN03141        124 RDMERYVSESLDSWR-----DDPPVLVQDETKKIAFEVLVKALISLEPGEEM-------EFLKKEFQEFIKGLM------  185 (452)
T ss_pred             HHHHHHHHHHHHhcc-----CCCCEEhHHHHHHHHHHHHHHHHcCCCchHHH-------HHHHHHHHHHhhhHH------
Confidence            666666666666653     35689999999999999999999997654211       333333333322111      


Q ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc-cCCCCcHHHHHHhhcCCCcccccccHHHHHHHHH
Q 048667          160 AIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVK-EHGANDMVDVLLQLADDPTLEVKLERDHIKASNQ  238 (425)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~  238 (425)
                      .+|+.  ++... ..+..++.+.+.+++..+|++++.....+... .....|+++.|++..     +..+++++|..++.
T Consensus       186 ~~~~~--~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~  257 (452)
T PLN03141        186 SLPIK--LPGTR-LYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDG-----SDELTDDLISDNMI  257 (452)
T ss_pred             hCccC--CCchH-hHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHH
Confidence            12211  11111 23455678889999999999887664321000 012468999999753     22689999999999


Q ss_pred             HHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhc----CCcccccccccCChhHHHHHHhhccCCCCcccccee
Q 048667          239 DLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIG----RNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPR  314 (425)
Q Consensus       239 ~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R  314 (425)
                      ++++||+|||+++++|++++|+.||++|+++++|++++.+    .+..++++++.+||||+|||+|++|++|+++.+ +|
T Consensus       258 ~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R  336 (452)
T PLN03141        258 DMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MR  336 (452)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ce
Confidence            9999999999999999999999999999999999988753    244578999999999999999999999999865 69


Q ss_pred             eeccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHH
Q 048667          315 LARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQS  394 (425)
Q Consensus       315 ~~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~  394 (425)
                      .+.+|++++||.||||+.|.++.+++||||++|+||++|+||||+++..    .+..|+|||+|+|.|+|++||.+|+++
T Consensus       337 ~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~  412 (452)
T PLN03141        337 KAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASI  412 (452)
T ss_pred             eecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999997532    457899999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCC
Q 048667          395 TLANLLHGFEWKLPGDV  411 (425)
Q Consensus       395 ~l~~ll~~~~~~~~~~~  411 (425)
                      +++.|+++|+++++++.
T Consensus       413 ~la~ll~~f~~~~~~~~  429 (452)
T PLN03141        413 FLHHLVTRFRWVAEEDT  429 (452)
T ss_pred             HHHHHHhcCeeecCCCC
Confidence            99999999999987653


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.1e-63  Score=478.57  Aligned_cols=375  Identities=21%  Similarity=0.287  Sum_probs=298.1

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccC-CHHHHhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELL-NPKRLAEFE   79 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f-~~~~l~~~~   79 (425)
                      |++++|+.++|+++||+++++|+.++ ..|.++........  .+ .+.+...+|+.|+++|+.+ .+.| ++++++.+.
T Consensus        85 ~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~~~~--~g-~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~  159 (490)
T PLN02302         85 YKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPESTVEL--IG-RKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYI  159 (490)
T ss_pred             eeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhHHHH--hc-cccccccCcHHHHHHHHHH-HhccCCHHHHHHHH
Confidence            46788999999999999999999865 45554432221121  22 2333444699999999999 6888 578899999


Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           80 YMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        80 ~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                      +.+.+.+.++++.+..     ++.+|+.+.+..++++++++++||.+.+...       ..+...+..+......  ...
T Consensus       160 ~~i~~~v~~~~~~~~~-----~~~v~~~~~~~~~~~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~--~~~  225 (490)
T PLN02302        160 PYIEENVKSCLEKWSK-----MGEIEFLTELRKLTFKIIMYIFLSSESELVM-------EALEREYTTLNYGVRA--MAI  225 (490)
T ss_pred             HHHHHHHHHHHHHhcC-----CCCEehHHHHHHHHHHHHHHHHcCCCChHHH-------HHHHHHHHHHHHHhhh--CCc
Confidence            9999999999998853     3469999999999999999999998765321       2332222222111111  011


Q ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHH
Q 048667          160 AIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQD  239 (425)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  239 (425)
                      .+|.       ....+..+..+.+.+++.+.++++++.....  ......|+++.|++..+++  +..+++++|.+++.+
T Consensus       226 ~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~  294 (490)
T PLN02302        226 NLPG-------FAYHRALKARKKLVALFQSIVDERRNSRKQN--ISPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLM  294 (490)
T ss_pred             CCCc-------hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHH
Confidence            1221       1123445566778888888888887654221  1134579999999875443  336899999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC----cccccccccCChhHHHHHHhhccCCCCccccceee
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRN----KWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRL  315 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~  315 (425)
                      +++||+|||+++++|++++|++||++|+|+++|++++.+..    ..++++++++||||+|||+|++|++|++|.. +|.
T Consensus       295 ~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~  373 (490)
T PLN02302        295 YLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FRE  373 (490)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhc
Confidence            99999999999999999999999999999999999987642    1378999999999999999999999999986 499


Q ss_pred             eccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHH
Q 048667          316 ARKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQST  395 (425)
Q Consensus       316 ~~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~  395 (425)
                      +.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++..    ..+..++|||+|+|.|||++||.+|++++
T Consensus       374 ~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~  449 (490)
T PLN02302        374 AKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIF  449 (490)
T ss_pred             ccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999653    24578999999999999999999999999


Q ss_pred             HHHHHhhceeecCCC
Q 048667          396 LANLLHGFEWKLPGD  410 (425)
Q Consensus       396 l~~ll~~~~~~~~~~  410 (425)
                      ++.|+++|+|++.++
T Consensus       450 la~ll~~f~~~~~~~  464 (490)
T PLN02302        450 LHHFLLGYRLERLNP  464 (490)
T ss_pred             HHHHHhcCeeEEcCC
Confidence            999999999998754


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=4.5e-62  Score=459.92  Aligned_cols=373  Identities=17%  Similarity=0.213  Sum_probs=291.2

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++++|++++|+|+||+++++++.++...|+.++.......+  ++.+++++ +|+.|+++|+++ .+.++.+.++.+..
T Consensus        71 ~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~l--g~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~~  146 (472)
T PLN02987         71 FMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLL--GKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHLL  146 (472)
T ss_pred             hhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHHHHh--Cccccccc-CcHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            578899999999999999999999887777655432222222  33567666 599999999997 56555555554331


Q ss_pred             -hhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           81 -MRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        81 -~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                       .+.+.++..++.|       .+++++.+.++.++++++++++||.+.+...       +.+...+.......    ...
T Consensus       147 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~-------~~~~~~~~~~~~~~----~~~  208 (472)
T PLN02987        147 LDIDRLIRFNLDSW-------SSRVLLMEEAKKITFELTVKQLMSFDPGEWT-------ESLRKEYVLVIEGF----FSV  208 (472)
T ss_pred             HHHHHHHHHHHHhh-------ccceehHHHHHHHHHHHHHHHHcCCCChHHH-------HHHHHHHHHHHhhh----hcC
Confidence             1222333333333       2369999999999999999999997764322       23323222222111    112


Q ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHH
Q 048667          160 AIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQD  239 (425)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  239 (425)
                      .+|++.     ...++..+..+++.+++.++|+++++....   +.....|+++.|++..      ..++++++.+++.+
T Consensus       209 ~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~  274 (472)
T PLN02987        209 PLPLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEEEE---GAEKKKDMLAALLASD------DGFSDEEIVDFLVA  274 (472)
T ss_pred             CCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhhhc---cCcccccHHHHHHhcC------CCCCHHHHHHHHHH
Confidence            345431     225667788899999999999998765422   1124579999999752      26899999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhc---CCcccccccccCChhHHHHHHhhccCCCCccccceeee
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIG---RNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLA  316 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~  316 (425)
                      +++||+|||+.+++|++++|++||++|+++++|++++.+   ++..++++++.+||||+|||+|+||++|+++.. +|.+
T Consensus       275 l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~  353 (472)
T PLN02987        275 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRA  353 (472)
T ss_pred             HHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccC
Confidence            999999999999999999999999999999999998875   234578899999999999999999999999865 5999


Q ss_pred             ccCeeeeceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHH
Q 048667          317 RKNCKLDGYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTL  396 (425)
Q Consensus       317 ~~~~~i~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l  396 (425)
                      .+|++++||.|||||.|.++.+.+||||++|+||++|+||||++.... ......++|||+|+|.|||++||.+|+++++
T Consensus       354 ~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l  432 (472)
T PLN02987        354 MTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFL  432 (472)
T ss_pred             CCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999975321 2234689999999999999999999999999


Q ss_pred             HHHHhhceeecCCCC
Q 048667          397 ANLLHGFEWKLPGDV  411 (425)
Q Consensus       397 ~~ll~~~~~~~~~~~  411 (425)
                      +.|+++|++++.++.
T Consensus       433 a~ll~~f~~~~~~~~  447 (472)
T PLN02987        433 HRLVTRFSWVPAEQD  447 (472)
T ss_pred             HHHHhceEEEECCCC
Confidence            999999999997654


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.3e-58  Score=401.12  Aligned_cols=390  Identities=21%  Similarity=0.316  Sum_probs=315.7

Q ss_pred             CeeeccCeeEEEeCCHHHHHHHHHhCCCccCCCCccccccccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhh
Q 048667            1 MQLKFGLDTVVVGSSAQVAELILKTHDTSFASRPALLAGKHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEY   80 (425)
Q Consensus         1 f~~~~g~~~~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~   80 (425)
                      |++.++|+.+.++.+|+....++.......+............+ |+++.+...+.....+.+.+ ...+...+++++.+
T Consensus        68 FTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vF-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e  145 (486)
T KOG0684|consen   68 FTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVF-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVE  145 (486)
T ss_pred             EEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhc-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHH
Confidence            78999999999999999999999866444443333322211122 46677766678888888887 78889999999999


Q ss_pred             hhHHHHHHHHHH-HHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhccccccc
Q 048667           81 MRVEERKAFLCK-LYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGD  159 (425)
Q Consensus        81 ~i~~~~~~~~~~-l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (425)
                      .|.++.++.++. |.+    +|..-.+......+.+.+.-...||+.....+       .++.....++.....  .+..
T Consensus       146 ~m~~el~~~f~~~~~~----s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~d-------~~~a~l~~dLd~~F~--~~d~  212 (486)
T KOG0684|consen  146 LMLEELHAYFETSLGE----SGETDGLYTFCRLIIFTASRLLLGGEVRDQLD-------ADVAKLYHDLDQGFQ--PFDF  212 (486)
T ss_pred             HHHHHHHHHHhccccc----ccchhHhhhhhHHHhhhhHHHhhhhhhhhhhc-------chHHHHHHHHhcccc--chHh
Confidence            999999998887 433    46666677777777777777777777666544       344455555543322  2233


Q ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHH
Q 048667          160 AIPWLSFLDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQD  239 (425)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  239 (425)
                      .||.  ++|.. ..++..++.+++.+++...|.++++..      +...+|+++.+++...+   +...+++|+...++.
T Consensus       213 ~FP~--~LP~~-~~r~~~ra~~~i~k~f~~~i~~rr~s~------s~~~~dmlq~l~~~y~d---g~~~te~e~a~~li~  280 (486)
T KOG0684|consen  213 LFPY--NLPIP-LLRRRDRARKKISKIFSKIILDRRASI------SKWDNDMLQSLMEKYKD---GRPTTEEEIAGLLIG  280 (486)
T ss_pred             hccc--CCCcc-hhhhHHHHHHHHHHHHHHHHHHHHhcc------ccccHHHHHHHHHHhhc---CCcCcHHHHHHHHHH
Confidence            5663  33222 345566899999999999999999875      34567999999983333   448999999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcc-cccccccCChhHHHHHHhhccCCCCccccceeeecc
Q 048667          240 LLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKW-VEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLARK  318 (425)
Q Consensus       240 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~  318 (425)
                      +++||+.||+.|..|++++|++|||+++.+++|++.++|.+.. .++++|++||.|++||+|||||+||.+..+ |.+.+
T Consensus       281 ~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~  359 (486)
T KOG0684|consen  281 LLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHE  359 (486)
T ss_pred             HHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHH-Hhhcc
Confidence            9999999999999999999999999999999999999987654 999999999999999999999999999988 99999


Q ss_pred             Ceeeec----eeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCc----cCCccceeecCCCCCCCCChHHHHH
Q 048667          319 NCKLDG----YDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDV----VGHNFELLPFGAGRRMCAGYALGLK  390 (425)
Q Consensus       319 ~~~i~g----~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~----~~~~~~~~~Fg~G~~~C~G~~la~~  390 (425)
                      |.++.+    |.||+|..|.++++.+||||++|+||+.|+|+||++++.+.    ..-++.|||||+|.|.|||++||.+
T Consensus       360 D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~  439 (486)
T KOG0684|consen  360 DLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYL  439 (486)
T ss_pred             ceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHH
Confidence            999965    99999999999999999999999999999999999765432    2234677999999999999999999


Q ss_pred             HHHHHHHHHHhhceeecCCCCCCCCCchh
Q 048667          391 TVQSTLANLLHGFEWKLPGDVKKEDLDME  419 (425)
Q Consensus       391 ~~~~~l~~ll~~~~~~~~~~~~~~~~~~~  419 (425)
                      |+|.++..+|+.||+++.++ +.+++++.
T Consensus       440 eIk~~~~l~L~~fdleLid~-~~P~~d~s  467 (486)
T KOG0684|consen  440 EIKQFISLLLRHFDLELIDG-PFPEVDYS  467 (486)
T ss_pred             HHHHHHHHHHHHcceeecCC-CCCCCCHH
Confidence            99999999999999999987 66666654


No 31 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=6.9e-57  Score=416.79  Aligned_cols=335  Identities=27%  Similarity=0.402  Sum_probs=277.9

Q ss_pred             EEEeCCHHHHHHHHHhCCCccCCCCccccc---cccccCCceeeeccCchhHHHHHHHHhhccCCHHHHhhhhhhhHHHH
Q 048667           10 VVVGSSAQVAELILKTHDTSFASRPALLAG---KHANYNYSVLATAPYGPYLRQARKIYITELLNPKRLAEFEYMRVEER   86 (425)
Q Consensus        10 ~vvv~dp~~i~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~   86 (425)
                      ++++++|++++++++++. .+++.......   ..... +.+.+...+|+.|.++||++ ++.|+++.++++.|.+.+.+
T Consensus        50 ~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ll~~dg~~H~r~Rkl~-~~~F~~~~~~~~~~~i~~~~  126 (411)
T COG2124          50 FWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL-GDGSLLTLDGPEHTRLRKLL-APAFTPRALRGYRPLIREIA  126 (411)
T ss_pred             EEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc-cccceeecCCHHHHHHHHHh-ccccCHHHHHHHHHHHHHHH
Confidence            899999999999999763 12222211111   11112 23323344599999999999 79999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHHHHHHhcccccccccccccc
Q 048667           87 KAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDELFLISGVLDIGDAIPWLSF  166 (425)
Q Consensus        87 ~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~  166 (425)
                      +++++.+ .    .++.+++.+.+..+++++|+ .+||.+.+...        .+..........        ..|... 
T Consensus       127 ~~~~~~~-~----~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~--------~~~~~~~~~~~~--------~~~~~~-  183 (411)
T COG2124         127 DRLLDDL-W----QGGADLVLDFAAELTLRVIA-ELLGVPLEDRP--------QLLRWSDALLLR--------LDPDLG-  183 (411)
T ss_pred             HHHHHhc-c----cCCchhHHHHhhhhhHHHHH-HHhCCCHHHHH--------HHHHHHHHHHhc--------cCcccC-
Confidence            9999999 3    23788899999999999999 99999987532        232332222211        002111 


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHHHHHHhhh
Q 048667          167 LDLQGNVKRMKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQDLLLAGID  246 (425)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~d  246 (425)
                        +.....+..++...+.+++..+|++++.         ....|+++.|+...++++  ..++++||.++++++++||+|
T Consensus       184 --~~~~~~~~~~a~~~~~~~~~~li~~rR~---------~~~~dlls~l~~a~~~~~--~~lsd~Ei~~~~~~ll~AGhe  250 (411)
T COG2124         184 --PEEPWRRARAARRELDAYLRALIAERRA---------APRDDLLSLLLSAEDDGG--GRLSDDEIRDELITLLVAGHE  250 (411)
T ss_pred             --CcccHHHHHHHHHHHHHHHHHHHHHhcc---------CCcccHHHHHHHHhhCCC--CcCCHHHHHHHHHHHHHhhhH
Confidence              1223567788999999999999999982         567899999998877752  269999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHhhccCCCCccccceeeeccCeeeecee
Q 048667          247 TSSITIEWAMTELLKKPEVIQKATKELDTAIGRNKWVEEKDIANLPYVQAIVKEVMRLHPAATLLVPRLARKNCKLDGYD  326 (425)
Q Consensus       247 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~i~g~~  326 (425)
                      ||+++|+|++|.|++||++++++++|.+.                ||++++|+|+||++||++. ++|.+.+|++++|+.
T Consensus       251 TTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~  313 (411)
T COG2124         251 TTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYR  313 (411)
T ss_pred             HHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEE
Confidence            99999999999999999999999998654                8999999999999999999 679999999999999


Q ss_pred             eCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCCccceeecCCCCCCCCChHHHHHHHHHHHHHHHhhceee
Q 048667          327 IIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYALGLKTVQSTLANLLHGFEWK  406 (425)
Q Consensus       327 ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~~~~~  406 (425)
                      ||||+.|.++.+++||||++|++|++|||+||.          ..|+|||+|+|.|+|..||++|++++++.||++|++.
T Consensus       314 Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~  383 (411)
T COG2124         314 IPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLL  383 (411)
T ss_pred             eCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999986          6899999999999999999999999999999999888


Q ss_pred             cCCC
Q 048667          407 LPGD  410 (425)
Q Consensus       407 ~~~~  410 (425)
                      ...+
T Consensus       384 ~~~~  387 (411)
T COG2124         384 LLAE  387 (411)
T ss_pred             hcCC
Confidence            7765


No 32 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.1e-55  Score=413.30  Aligned_cols=363  Identities=16%  Similarity=0.227  Sum_probs=262.1

Q ss_pred             CeeeccCeeE-------EEeCCHHHHHHHHHh----CCCccCCCCccccccccccCCc--eeeeccCchhHHHHHHHHhh
Q 048667            1 MQLKFGLDTV-------VVGSSAQVAELILKT----HDTSFASRPALLAGKHANYNYS--VLATAPYGPYLRQARKIYIT   67 (425)
Q Consensus         1 f~~~~g~~~~-------vvv~dp~~i~~i~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~R~~~~~   67 (425)
                      |+++++|.++       |+++||++++.++.+    +...+..... .... + .|+.  ..++..+|+.|+++||++ .
T Consensus        59 fk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~~~~-~~~~-l-~G~~~~~s~~~~~g~~H~r~Rrll-~  134 (480)
T PLN02648         59 FRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGTYM-PSTA-F-TGGYRVLSYLDPSEPKHAKLKSFL-F  134 (480)
T ss_pred             EEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccccceeeec-cCcc-c-cCCceeeeecCCCCchHHHHHHHH-H
Confidence            6788888665       999999999999974    3333333221 2222 2 2323  144445699999999999 7


Q ss_pred             ccCCHHHHhhhhhhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHHHHHhcccccccccCCCCChhHHHHHHHH
Q 048667           68 ELLNPKRLAEFEYMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMSRMLLGKRYTEEDENNVVTPKEFTEIVDE  147 (425)
Q Consensus        68 ~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  147 (425)
                      ++|+ ..++.+.+.|.+.++++++.|..... .+.++|+.+.++.+++|++++++||.+.+...     ..+.+......
T Consensus       135 ~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~-~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~-----l~~~~~~~~~~  207 (480)
T PLN02648        135 ELLK-SRHRRFIPEFRAAFAELFDTWEAELA-KKGKAEFNDPLDQMAFNFLCKALTGKDPSETA-----LGSDGPALIQK  207 (480)
T ss_pred             HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh-hCCCccccchHHHHHHHHHHHHHcCCCcchhh-----hccchhHHHHH
Confidence            9998 47789999999999999999965422 45579999999999999999999998765411     00222222222


Q ss_pred             HHHHhccccccccccccccccccchHHH------------HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCcHHHHH
Q 048667          148 LFLISGVLDIGDAIPWLSFLDLQGNVKR------------MKAVKKKANKFYEYVLDDHEHHARRKWVKEHGANDMVDVL  215 (425)
Q Consensus       148 ~~~~~~~~~~~~~~P~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~l  215 (425)
                      ....       ..+|......+ ...++            ..+..+.+.+++.                     +.++.|
T Consensus       208 ~~~~-------~~~p~~~~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~l  258 (480)
T PLN02648        208 WLAL-------QLAPLASTGLP-HVLEELLLHTFPLPFFLVKSDYDKLYDFFR---------------------ASATEA  258 (480)
T ss_pred             HHHH-------HhhHHHHcCch-HHHHHHhhcccCCchhhhhccHHHHHHHHH---------------------HHHHHH
Confidence            1110       00111100000 00000            0001111111111                     112234


Q ss_pred             HhhcCCCcccccccHHHHHHHHHH-HHHHhhhchHHHHHHHHHHHhhChH-HHHHHHHHHHHHhcC-CcccccccccCCh
Q 048667          216 LQLADDPTLEVKLERDHIKASNQD-LLLAGIDTSSITIEWAMTELLKKPE-VIQKATKELDTAIGR-NKWVEEKDIANLP  292 (425)
Q Consensus       216 l~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~dtt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp  292 (425)
                      ++...+.    +++++++.++++. +.+++++||+.+++|++|+|++||+ +|++|++|++.+++. ++.++++++++||
T Consensus       259 l~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~  334 (480)
T PLN02648        259 LDLAEKF----GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMP  334 (480)
T ss_pred             HHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCH
Confidence            4333222    5999999999875 4456677778899999999999995 999999999999863 4568999999999


Q ss_pred             hHHHHHHhhccCCCCccccceeeeccCeeee----ceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCccCC
Q 048667          293 YVQAIVKEVMRLHPAATLLVPRLARKNCKLD----GYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDVVGH  368 (425)
Q Consensus       293 ~l~a~i~E~lRl~p~~~~~~~R~~~~~~~i~----g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~~~~  368 (425)
                      ||++||+|+||++|+++... |.+.+|++++    ||.||||+.|.++.+.+||||++|+||++|+|+||+++..+   .
T Consensus       335 yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~  410 (480)
T PLN02648        335 LVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---K  410 (480)
T ss_pred             HHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---c
Confidence            99999999999999999987 8899999996    79999999999999999999999999999999999865321   1


Q ss_pred             ccceeec---------CCCCCCCCChHHHHHHHHHHHHHHHhhce-eecCCCC
Q 048667          369 NFELLPF---------GAGRRMCAGYALGLKTVQSTLANLLHGFE-WKLPGDV  411 (425)
Q Consensus       369 ~~~~~~F---------g~G~~~C~G~~la~~~~~~~l~~ll~~~~-~~~~~~~  411 (425)
                      ...+++|         |+|+|.|||++||++|++++++.|+++|+ |++.++.
T Consensus       411 ~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        411 LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            2344554         56779999999999999999999999997 9997765


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=80.76  E-value=1.1  Score=28.56  Aligned_cols=8  Identities=50%  Similarity=0.862  Sum_probs=6.5

Q ss_pred             CCCCCCCC
Q 048667          354 CPERFIGK  361 (425)
Q Consensus       354 ~p~R~~~~  361 (425)
                      ||||||+-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            88999864


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=76.17  E-value=1  Score=37.11  Aligned_cols=43  Identities=12%  Similarity=0.105  Sum_probs=32.9

Q ss_pred             ChhHHHHHHhhccCCCCccccceeeeccCeeeeceeeCCCCEEEE
Q 048667          291 LPYVQAIVKEVMRLHPAATLLVPRLARKNCKLDGYDIIKNSRVII  335 (425)
Q Consensus       291 lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~i~g~~ip~Gt~v~~  335 (425)
                      -....|||.|+.-+....-.-+  ...+|+.++|..|||||.++-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vrl--RLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVRL--RLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEEE--EEcCceEECCEEeCCCCEEEE
Confidence            3456889999987765555432  467899999999999998765


No 35 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=71.67  E-value=11  Score=22.85  Aligned_cols=43  Identities=28%  Similarity=0.350  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHH
Q 048667          231 DHIKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKEL  273 (425)
Q Consensus       231 ~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei  273 (425)
                      -++..++..++-.|.|..+..++--+.+..-||+....+..|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566777778888888888888888888889999888887776


No 36 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=67.24  E-value=11  Score=33.36  Aligned_cols=72  Identities=14%  Similarity=0.308  Sum_probs=48.7

Q ss_pred             hHHHHHHhhccCCCCc---cccceeeeccCeeee----ceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCc
Q 048667          293 YVQAIVKEVMRLHPAA---TLLVPRLARKNCKLD----GYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDV  365 (425)
Q Consensus       293 ~l~a~i~E~lRl~p~~---~~~~~R~~~~~~~i~----g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~  365 (425)
                      +-+.+++.+..+.||.   |+.+.-..+.|..+=    .-+|.+||.|.++                             
T Consensus       274 ~ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-----------------------------  324 (361)
T COG1759         274 MGERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-----------------------------  324 (361)
T ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-----------------------------
Confidence            3466888889999975   444444556664442    4567888876652                             


Q ss_pred             cCCccceeecCCCCCCCCChHHHHHHHHHHHH
Q 048667          366 VGHNFELLPFGAGRRMCAGYALGLKTVQSTLA  397 (425)
Q Consensus       366 ~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~  397 (425)
                       +++++++-||.+  +-.|+++|. |+|.++-
T Consensus       325 -GspYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         325 -GSPYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             -CCcchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence             255677777755  678999998 8887653


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=66.34  E-value=7.4  Score=26.17  Aligned_cols=40  Identities=8%  Similarity=0.156  Sum_probs=33.6

Q ss_pred             HHHhhccCCCCccccceeeeccC--eeeeceeeCCCCEEEEe
Q 048667          297 IVKEVMRLHPAATLLVPRLARKN--CKLDGYDIIKNSRVIIN  336 (425)
Q Consensus       297 ~i~E~lRl~p~~~~~~~R~~~~~--~~i~g~~ip~Gt~v~~~  336 (425)
                      -|+|.+.|.+.....+-|.+.++  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            47889999999988887888775  56699999999998875


No 38 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=57.05  E-value=4.8  Score=24.77  Aligned_cols=11  Identities=45%  Similarity=0.945  Sum_probs=9.2

Q ss_pred             eecCCCCCCCC
Q 048667          373 LPFGAGRRMCA  383 (425)
Q Consensus       373 ~~Fg~G~~~C~  383 (425)
                      -+||-|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999984


No 39 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.58  E-value=16  Score=23.06  Aligned_cols=19  Identities=26%  Similarity=0.422  Sum_probs=16.1

Q ss_pred             HHHHHHhhChHHHHHHHHH
Q 048667          254 WAMTELLKKPEVIQKATKE  272 (425)
Q Consensus       254 ~~l~~L~~~p~~~~~l~~E  272 (425)
                      -++.+|.+||++.++|.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            3678999999999999773


No 40 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=45.72  E-value=9  Score=35.47  Aligned_cols=45  Identities=11%  Similarity=0.031  Sum_probs=33.9

Q ss_pred             CChhHHHHHHhhccCCCCccccceeeeccCeeeeceeeCCCCEEEEe
Q 048667          290 NLPYVQAIVKEVMRLHPAATLLVPRLARKNCKLDGYDIIKNSRVIIN  336 (425)
Q Consensus       290 ~lp~l~a~i~E~lRl~p~~~~~~~R~~~~~~~i~g~~ip~Gt~v~~~  336 (425)
                      .-..+.|||.|+.-+.-..-+-+  ...+|+.++|..||+||.|+-.
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~vrl--RLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAVKL--RLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCEEEE--EEcCceeeCCEEecCCCEEEEE
Confidence            34567889999988875554432  4578999999999999987543


No 41 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=40.07  E-value=25  Score=26.76  Aligned_cols=23  Identities=13%  Similarity=0.361  Sum_probs=17.2

Q ss_pred             CCCCChHHHHHHHHHHHHHHHhh
Q 048667          380 RMCAGYALGLKTVQSTLANLLHG  402 (425)
Q Consensus       380 ~~C~G~~la~~~~~~~l~~ll~~  402 (425)
                      -.|.|+.||..++-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999875


No 42 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=39.16  E-value=29  Score=18.81  Aligned_cols=16  Identities=25%  Similarity=0.659  Sum_probs=13.4

Q ss_pred             CccceeecCCCCCCCC
Q 048667          368 HNFELLPFGAGRRMCA  383 (425)
Q Consensus       368 ~~~~~~~Fg~G~~~C~  383 (425)
                      .+..|+|+.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4579999998889985


No 43 
>PF06973 DUF1297:  Domain of unknown function (DUF1297);  InterPro: IPR009720 The last two steps of de novo purine biosynthesis are:  i) conversion of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (FAICAR) ii) conversion of FAICAR to inosine5'-monophopsphate (IMP)  In bacteria and eukaryotes, these steps are catalysed by the well-characterised bifunctional enzyme PurH []. Archaea do not appear to posses PurH, however, and perform these reactions by a different mechanism []. In archaea, step i) is catalysed by the well-conserved PurP protein, while step ii) is catalysed by the PurO enzyme in some (though not all) species [, ]. This entry represents the C-terminal domain of PurP, which is homologous to the ATP-GRASP fold and thus may be involved in ATP-binding. It is almost always found in association with IPR010672 from INTERPRO.; GO: 0000287 magnesium ion binding, 0005524 ATP binding, 0016879 ligase activity, forming carbon-nitrogen bonds, 0006188 IMP biosynthetic process; PDB: 2R85_B 2R87_E 2R84_A 2R86_A 2PBZ_B 2R7L_A 2R7N_A 2R7K_A 2R7M_A.
Probab=38.83  E-value=8.3  Score=31.00  Aligned_cols=71  Identities=14%  Similarity=0.334  Sum_probs=39.7

Q ss_pred             hHHHHHHhhccCCCCc---cccceeeeccCeeee----ceeeCCCCEEEEechhccCCCCCCCCCCCCCCCCCCCCCcCc
Q 048667          293 YVQAIVKEVMRLHPAA---TLLVPRLARKNCKLD----GYDIIKNSRVIINVWAIGRDPTIWEKPDEFCPERFIGKEIDV  365 (425)
Q Consensus       293 ~l~a~i~E~lRl~p~~---~~~~~R~~~~~~~i~----g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~p~R~~~~~~~~  365 (425)
                      +=+.+++.+-+++||.   |+.+.-+++.|..+-    .-+|++||.+.++                             
T Consensus       101 ~ge~fV~a~k~l~~PG~iGPFcLq~ivt~dle~vvfevS~RI~gGTN~~~~-----------------------------  151 (188)
T PF06973_consen  101 MGERFVEASKELVPPGMIGPFCLQSIVTDDLEFVVFEVSARIVGGTNVYMG-----------------------------  151 (188)
T ss_dssp             HHHHHHHHHHHHSTT---EEEEEEEEE-TTSSEEEEEEESSB-GGGGGGTT-----------------------------
T ss_pred             HHHHHHHHHHHhcCCCccccceEEEEEcCCceEEEEEEeccccCCCCCccC-----------------------------
Confidence            5678899999999985   444434445554442    3456777733221                             


Q ss_pred             cCCccceeecCCCCCCCCChHHHHHHHHHHH
Q 048667          366 VGHNFELLPFGAGRRMCAGYALGLKTVQSTL  396 (425)
Q Consensus       366 ~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l  396 (425)
                       +++++++-||  .-+-.||++| +|+|.++
T Consensus       152 -GspYS~l~~~--~pms~GrRIA-~EIk~A~  178 (188)
T PF06973_consen  152 -GSPYSKLYWG--EPMSMGRRIA-REIKEAI  178 (188)
T ss_dssp             ---CCHHHTTS--S---HHHHHH-HHHHHHH
T ss_pred             -CCCchHHHcC--CCcchhHHHH-HHHHHHH
Confidence             2455666555  3467889998 5777765


No 44 
>PRK05933 type III secretion system protein; Validated
Probab=37.90  E-value=30  Score=30.68  Aligned_cols=43  Identities=16%  Similarity=0.261  Sum_probs=35.1

Q ss_pred             HHHHHHhhccCCCCccccceeee-cc--CeeeeceeeCCCCEEEEe
Q 048667          294 VQAIVKEVMRLHPAATLLVPRLA-RK--NCKLDGYDIIKNSRVIIN  336 (425)
Q Consensus       294 l~a~i~E~lRl~p~~~~~~~R~~-~~--~~~i~g~~ip~Gt~v~~~  336 (425)
                      ...-|+|.++|.+....-+-|.+ .+  |+.++|..|.+|..|+++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            45679999999999888875554 34  577799999999999875


No 45 
>PF09551 Spore_II_R:  Stage II sporulation protein R (spore_II_R);  InterPro: IPR014202  This entry is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation [, ].
Probab=36.56  E-value=69  Score=24.39  Aligned_cols=19  Identities=5%  Similarity=-0.108  Sum_probs=14.0

Q ss_pred             eeeccCeeeeceeeCCCCE
Q 048667          314 RLARKNCKLDGYDIIKNSR  332 (425)
Q Consensus       314 R~~~~~~~i~g~~ip~Gt~  332 (425)
                      +..-..-.+|++.+|+|..
T Consensus        80 ~~~FPtK~YG~~~~PaG~Y   98 (130)
T PF09551_consen   80 RFYFPTKTYGDIVLPAGEY   98 (130)
T ss_pred             eeeCCCceECCEeccCCce
Confidence            4444456789999999986


No 46 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=34.49  E-value=43  Score=26.09  Aligned_cols=41  Identities=12%  Similarity=0.324  Sum_probs=27.2

Q ss_pred             eeccCeeeeceeeCCCCEEEEechh-------ccCCCCCCCCCCCCCCC
Q 048667          315 LARKNCKLDGYDIIKNSRVIINVWA-------IGRDPTIWEKPDEFCPE  356 (425)
Q Consensus       315 ~~~~~~~i~g~~ip~Gt~v~~~~~~-------~~~d~~~~~dp~~F~p~  356 (425)
                      ...+|+.++|..||||++-+.....       .|++...|-. ..++|+
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            4477999999999999987665433       3455555533 344443


No 47 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=31.09  E-value=33  Score=23.77  Aligned_cols=19  Identities=21%  Similarity=0.781  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHhhceeecCC
Q 048667          391 TVQSTLANLLHGFEWKLPG  409 (425)
Q Consensus       391 ~~~~~l~~ll~~~~~~~~~  409 (425)
                      -|+-++..+|.-|||.|.+
T Consensus        61 ~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHhccCCceeee
Confidence            4889999999999999985


No 48 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=29.13  E-value=39  Score=25.40  Aligned_cols=21  Identities=24%  Similarity=0.346  Sum_probs=18.0

Q ss_pred             eeccCeeeeceeeCCCCEEEE
Q 048667          315 LARKNCKLDGYDIIKNSRVII  335 (425)
Q Consensus       315 ~~~~~~~i~g~~ip~Gt~v~~  335 (425)
                      ++++|.+++|-.||+||.|..
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            557799999999999998854


No 49 
>PHA03162 hypothetical protein; Provisional
Probab=27.92  E-value=52  Score=24.79  Aligned_cols=26  Identities=15%  Similarity=0.344  Sum_probs=20.7

Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHh
Q 048667          376 GAGRRMCAGYALGLKTVQSTLANLLH  401 (425)
Q Consensus       376 g~G~~~C~G~~la~~~~~~~l~~ll~  401 (425)
                      +.|++.|||+...+-++..=|+.|=.
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLqm   27 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQL   27 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHHH
Confidence            46999999999988888777766643


No 50 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=26.74  E-value=65  Score=24.86  Aligned_cols=42  Identities=17%  Similarity=0.270  Sum_probs=34.3

Q ss_pred             HHHHHhhccCCCCccccceeeeccC--eeeeceeeCCCCEEEEe
Q 048667          295 QAIVKEVMRLHPAATLLVPRLARKN--CKLDGYDIIKNSRVIIN  336 (425)
Q Consensus       295 ~a~i~E~lRl~p~~~~~~~R~~~~~--~~i~g~~ip~Gt~v~~~  336 (425)
                      ..-|.|-++|.+.....+.+.+.++  +.++|+.|-+|..|.+.
T Consensus        83 ~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          83 KMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            3457899999999888888888775  55599999999998774


No 51 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=26.00  E-value=30  Score=21.55  Aligned_cols=10  Identities=40%  Similarity=1.079  Sum_probs=8.6

Q ss_pred             ecCCCCCCCC
Q 048667          374 PFGAGRRMCA  383 (425)
Q Consensus       374 ~Fg~G~~~C~  383 (425)
                      -||.|+|.|.
T Consensus        11 ~yGkGsr~C~   20 (54)
T PTZ00218         11 TYGKGSRQCR   20 (54)
T ss_pred             cCCCCCCeee
Confidence            5899999995


No 52 
>PF14164 YqzH:  YqzH-like protein
Probab=25.24  E-value=2e+02  Score=18.79  Aligned_cols=40  Identities=8%  Similarity=0.032  Sum_probs=26.7

Q ss_pred             hhhhHHHHHHHHHHHHhhcCCCCCceehHHHHHHHHHHHHH
Q 048667           79 EYMRVEERKAFLCKLYKSSSNSSMPIHLRDRLYMLTLAIMS  119 (425)
Q Consensus        79 ~~~i~~~~~~~~~~l~~~~~~~~~~vdl~~~~~~~~~d~i~  119 (425)
                      .|+=..+-+.|.+.+....+ +....|++..+...+.+.++
T Consensus        24 ~pls~~E~~~L~~~i~~~~~-~~~~~Dl~eiVeDvVY~yiT   63 (64)
T PF14164_consen   24 MPLSDEEWEELCKHIQERKN-EEPDEDLHEIVEDVVYDYIT   63 (64)
T ss_pred             CCCCHHHHHHHHHHHHHHHh-cCCCchHHHHHHHHHHHHhc
Confidence            35555666666676666544 55668898888887777654


No 53 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.78  E-value=1.2e+02  Score=17.41  Aligned_cols=11  Identities=27%  Similarity=0.567  Sum_probs=8.9

Q ss_pred             hChHHHHHHHH
Q 048667          261 KKPEVIQKATK  271 (425)
Q Consensus       261 ~~p~~~~~l~~  271 (425)
                      +||++++.++.
T Consensus        25 ~HPei~~~i~~   35 (38)
T PF14483_consen   25 RHPEIQQEIRS   35 (38)
T ss_dssp             HSTHHHHHHHT
T ss_pred             hChhHHHHHHh
Confidence            79999988764


No 54 
>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated
Probab=24.50  E-value=2.9e+02  Score=20.24  Aligned_cols=67  Identities=12%  Similarity=0.123  Sum_probs=42.6

Q ss_pred             CCCCcHHHHHHhhcCCCcccccccHHHHHHHHHHHHHHhhhc--------hHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 048667          206 HGANDMVDVLLQLADDPTLEVKLERDHIKASNQDLLLAGIDT--------SSITIEWAMTELLKKPEVIQKATKELDTAI  277 (425)
Q Consensus       206 ~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~dt--------t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  277 (425)
                      ....++...|+..      +...-..-+..++..++.|+.+.        ++-++.+++..|+.+-=-.+.+.+|+..-.
T Consensus        19 ~~~~SYT~~L~~~------G~~ki~kKlgEEa~E~i~A~~~~d~~~~i~E~ADLlYHllVlL~~~gv~~~dV~~eL~~R~   92 (105)
T PRK00400         19 DPEGSYTAKLLDK------GLDKILKKVGEEATEVVIAAKDGDREELVYEIADLLYHLLVLLAARGISLEDVLAELERRE   92 (105)
T ss_pred             CCCCcHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHc
Confidence            4667898999873      22233345666777777775432        456777777777776555666667776654


Q ss_pred             c
Q 048667          278 G  278 (425)
Q Consensus       278 ~  278 (425)
                      +
T Consensus        93 ~   93 (105)
T PRK00400         93 G   93 (105)
T ss_pred             C
Confidence            3


No 55 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=23.89  E-value=29  Score=27.67  Aligned_cols=36  Identities=28%  Similarity=0.503  Sum_probs=26.2

Q ss_pred             CCCCCCCCCCCCcCccCCccceeecCCCCCCCCChH
Q 048667          351 DEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAGYA  386 (425)
Q Consensus       351 ~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~  386 (425)
                      -+|+|++|-.-=.....+....+-|..|.-.|-|..
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            478999985321122346789999999999999953


No 56 
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=23.55  E-value=27  Score=28.42  Aligned_cols=57  Identities=18%  Similarity=0.313  Sum_probs=35.6

Q ss_pred             CCCCCCCCCCCCcCccCCccceeecCCCCCCCCC-----------hHHHHHHHHHHHHHHHhhceeec
Q 048667          351 DEFCPERFIGKEIDVVGHNFELLPFGAGRRMCAG-----------YALGLKTVQSTLANLLHGFEWKL  407 (425)
Q Consensus       351 ~~F~p~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G-----------~~la~~~~~~~l~~ll~~~~~~~  407 (425)
                      -+|+|.||-.---....+...-+-|..|.=.|-|           +.+|+..-|+....-+++|++..
T Consensus        50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctgA~se~~ar~aark~aRilqkLgf~~~f~~fki~n  117 (200)
T KOG3302|consen   50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTGAKSEDSARLAARKYARILQKLGFPVKFRDFKINN  117 (200)
T ss_pred             cccCcccccEEEEEEcCCceEEEEecCCcEEEeccCCHHHHHHHHHHHHHHHHHcCCCceehheeeEE
Confidence            5799999853211113355678899999999998           44555555555455555555443


No 57 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=23.09  E-value=51  Score=27.46  Aligned_cols=20  Identities=35%  Similarity=0.865  Sum_probs=17.6

Q ss_pred             hhccCCCCCCCCCCCCCCCC
Q 048667          338 WAIGRDPTIWEKPDEFCPER  357 (425)
Q Consensus       338 ~~~~~d~~~~~dp~~F~p~R  357 (425)
                      +..|.|+.+|.|.+.|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34589999999999999987


No 58 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=22.99  E-value=2.7e+02  Score=19.35  Aligned_cols=50  Identities=12%  Similarity=0.109  Sum_probs=41.6

Q ss_pred             ccHHHHHHHHHHHHHHhhhchHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 048667          228 LERDHIKASNQDLLLAGIDTSSITIEWAMTELLKKPEVIQKATKELDTAI  277 (425)
Q Consensus       228 l~~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  277 (425)
                      ...+.........++-=+.+++....-.+.+-++||+..+++++.+...+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34555666677788888999999999999999999999999999887654


No 59 
>PF02663 FmdE:  FmdE, Molybdenum formylmethanofuran dehydrogenase operon ;  InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase [].  This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=22.34  E-value=61  Score=24.70  Aligned_cols=22  Identities=32%  Similarity=0.599  Sum_probs=17.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHHh
Q 048667          380 RMCAGYALGLKTVQSTLANLLH  401 (425)
Q Consensus       380 ~~C~G~~la~~~~~~~l~~ll~  401 (425)
                      |.|||.-++..+.+.++..|=.
T Consensus         5 H~Cpgl~~G~r~~~~a~~~l~~   26 (131)
T PF02663_consen    5 HLCPGLALGYRMAKYALEELGI   26 (131)
T ss_dssp             S--HHHHHHHHHHHHHHHHHTS
T ss_pred             CcCccHHHHHHHHHHHHHHcCC
Confidence            8999999999999998887644


No 60 
>PRK02759 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; Reviewed
Probab=21.71  E-value=4.8e+02  Score=21.80  Aligned_cols=74  Identities=11%  Similarity=0.121  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHhhhhhhccCCCCcHHHHHHhhcCCCcccccccHHHHHHHHHHHHHHhhhc--------hHHHHHHHHH
Q 048667          186 FYEYVLDDHEHHARRKWVKEHGANDMVDVLLQLADDPTLEVKLERDHIKASNQDLLLAGIDT--------SSITIEWAMT  257 (425)
Q Consensus       186 ~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~dt--------t~~~l~~~l~  257 (425)
                      -+.+.|.+|+.        ..+..++...|+..      +...-..-+..++..+++|+.+.        ++-++.+++.
T Consensus       118 ~L~~~I~~Rk~--------~~pe~SYT~~L~~~------G~~kI~kKvgEEA~E~iiAak~~d~~~li~E~ADLlYHllV  183 (203)
T PRK02759        118 QLEQLIAERKN--------APPEGSYTAKLFAS------GTKRIAQKVGEEAVEVVLAAKNNDKEELINEAADLLYHLLV  183 (203)
T ss_pred             HHHHHHHHHHh--------CCCCCcHHHHHHhC------cHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence            33455556553        24667899999864      11222355667777777775443        3445555555


Q ss_pred             HHhhChHHHHHHHHHH
Q 048667          258 ELLKKPEVIQKATKEL  273 (425)
Q Consensus       258 ~L~~~p~~~~~l~~Ei  273 (425)
                      .|+.+-=-.+.+.+|+
T Consensus       184 lL~~~gv~l~dV~~eL  199 (203)
T PRK02759        184 LLADQGLSLSDVIAEL  199 (203)
T ss_pred             HHHHcCCCHHHHHHHH
Confidence            5555433333444444


No 61 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=20.73  E-value=2e+02  Score=20.13  Aligned_cols=17  Identities=24%  Similarity=0.520  Sum_probs=14.6

Q ss_pred             hHHHHHHHHHHHHHhcC
Q 048667          263 PEVIQKATKELDTAIGR  279 (425)
Q Consensus       263 p~~~~~l~~Ei~~~~~~  279 (425)
                      |+..+.+++||.+++..
T Consensus        36 pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          36 PDYLEQLRKEILEVISK   52 (88)
T ss_pred             cchHHHHHHHHHHHHHH
Confidence            88999999999988753


No 62 
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=20.40  E-value=3.2e+02  Score=19.25  Aligned_cols=42  Identities=12%  Similarity=0.150  Sum_probs=30.5

Q ss_pred             CchhHHHHHHHHhh---ccCCHHHHhhh----h-hhhHHHHHHHHHHHHhh
Q 048667           54 YGPYLRQARKIYIT---ELLNPKRLAEF----E-YMRVEERKAFLCKLYKS   96 (425)
Q Consensus        54 ~~~~~~~~R~~~~~---~~f~~~~l~~~----~-~~i~~~~~~~~~~l~~~   96 (425)
                      -|..|++.=|.+ .   .+++...+...    . .-+.+.+.+++..|...
T Consensus        12 vGr~WK~laR~L-g~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~   61 (90)
T cd08780          12 VGKKWKPVGRSL-QKNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFIQS   61 (90)
T ss_pred             HhHHHHHHHHHH-cccccccchhHHHHHHhhcccccHHHHHHHHHHHHHHh
Confidence            388999988887 4   23666666654    2 33788999999999876


Done!