BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048668
(725 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 196/392 (50%), Gaps = 28/392 (7%)
Query: 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKF 73
+L+ LA++GN ++G + + L+ + + N+ P LG L L+++ NK
Sbjct: 176 ELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 232
Query: 74 YGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNA 133
G F R+I + L+ ++SN+F G +P + L +L+ L + N F G IPD LS A
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 134 SN-LELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKV 192
+ L LDLS N F G V F S +L L L NN + +L T L LKV
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF----SGELPMDTLLK-MRGLKV 344
Query: 193 LSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTI-PLGIRNLVN-LIALAVEVNQLH 250
L LS N+F GELP S+ NLS++++ + N SG I P +N N L L ++ N
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 251 GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG----------- 299
G IP + L L L N+L G+IPS LG+L+KL L L N L+G
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 300 --NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDISSNQF 357
I N L G +P L S T P+ +G L+NL IL +S+N F
Sbjct: 465 LETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 523
Query: 358 SGMIPVTLSTCVSLEYVDISSNCFHGIIPPSL 389
SG IP L C SL ++D+++N F+G IP ++
Sbjct: 524 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 223/531 (41%), Gaps = 83/531 (15%)
Query: 1 LEGQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTL-GL 59
L G + I + +L+ L ++ N G +P L +LQ + + N G+ P L G
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
L L+++ N FYG P + S LE L+SN FSG LP D ++ + LK L +
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 349
Query: 120 NNFFGLIPDSLSN-ASNLELLDLSNNQFKGKVSIDF--SSLKILWRLNLEQNNLGIGAAN 176
N F G +P+SL+N +++L LDLS+N F G + + + L L L+ N
Sbjct: 350 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN-------- 401
Query: 177 DLGFV----TFLTNCSSLKVLSLSDNQFGGELPHSIANLSS------------------- 213
GF L+NCS L L LS N G +P S+ +LS
Sbjct: 402 --GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Query: 214 ----TMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLY 269
T+ ++ N ++G IP G+ N NL +++ N+L G IP IG L+NL +L L
Sbjct: 460 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 519
Query: 270 KNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---------------NFIASQN-------- 306
N G+IP+ LG+ L LDL +N G NFIA +
Sbjct: 520 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 579
Query: 307 ------------KLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDISS 354
+ G +QL ++T P N +++ LD+S
Sbjct: 580 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT-FDNNGSMMFLDMSY 638
Query: 355 NQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKXXX 414
N SG IP + + L +++ N G IP +G L+ + LD+S N G+ P+
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Query: 415 XXXXXXXXXXXYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGIDELHLPSC 465
N+L G +P G F N LCG LP C
Sbjct: 699 ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG----YPLPRC 745
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 188/430 (43%), Gaps = 56/430 (13%)
Query: 15 LQALALAGNYLTGKLPDF--IGNLSALQVIHIKGNSLGGKFPTTLGL-LRNLVQLNVAEN 71
L +L L+ N L+G + +G+ S L+ +++ N+L + GL L +L L+++ N
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 158
Query: 72 KFYGMFPRSIC---NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPD 128
G L++ ++ N+ SG + VNL + L + +NNF IP
Sbjct: 159 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL---EFLDVSSNNFSTGIP- 214
Query: 129 SLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCS 188
L + S L+ LD+S N+ G S S+ L LN+ N +G L
Sbjct: 215 FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF-VGPIPPLPL-------K 266
Query: 189 SLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ 248
SL+ LSL++N+F GE+P ++ T+ + GN G +P + L +LA+ N
Sbjct: 267 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 326
Query: 249 LHGTIP-DVIGELKNLQLLGLYKNFLQGSIPSGLGNLT-KLAKLDLGSNSLQGNFIASQN 306
G +P D + +++ L++L L N G +P L NL+ L LDL SN+ G +
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL---- 382
Query: 307 KLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKN-LIILDISSNQFSGMIPVTL 365
P N KN L L + +N F+G IP TL
Sbjct: 383 -------------------------------PNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 366 STCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKXXXXXXXXXXXXXX 425
S C L + +S N G IP SLG L ++ L + N G+ P+
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 426 YNHLEGEVPT 435
+N L GE+P+
Sbjct: 472 FNDLTGEIPS 481
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 196/392 (50%), Gaps = 28/392 (7%)
Query: 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKF 73
+L+ LA++GN ++G + + L+ + + N+ P LG L L+++ NK
Sbjct: 179 ELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 235
Query: 74 YGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNA 133
G F R+I + L+ ++SN+F G +P + L +L+ L + N F G IPD LS A
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 134 SN-LELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKV 192
+ L LDLS N F G V F S +L L L NN + +L T L LKV
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF----SGELPMDTLLK-MRGLKV 347
Query: 193 LSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTI-PLGIRNLVN-LIALAVEVNQLH 250
L LS N+F GELP S+ NLS++++ + N SG I P +N N L L ++ N
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 251 GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG----------- 299
G IP + L L L N+L G+IPS LG+L+KL L L N L+G
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 300 --NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDISSNQF 357
I N L G +P L S T P+ +G L+NL IL +S+N F
Sbjct: 468 LETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Query: 358 SGMIPVTLSTCVSLEYVDISSNCFHGIIPPSL 389
SG IP L C SL ++D+++N F+G IP ++
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 223/531 (41%), Gaps = 83/531 (15%)
Query: 1 LEGQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTL-GL 59
L G + I + +L+ L ++ N G +P L +LQ + + N G+ P L G
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
L L+++ N FYG P + S LE L+SN FSG LP D ++ + LK L +
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 352
Query: 120 NNFFGLIPDSLSN-ASNLELLDLSNNQFKGKVSIDF--SSLKILWRLNLEQNNLGIGAAN 176
N F G +P+SL+N +++L LDLS+N F G + + + L L L+ N
Sbjct: 353 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN-------- 404
Query: 177 DLGFV----TFLTNCSSLKVLSLSDNQFGGELPHSIANLSS------------------- 213
GF L+NCS L L LS N G +P S+ +LS
Sbjct: 405 --GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 214 ----TMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLY 269
T+ ++ N ++G IP G+ N NL +++ N+L G IP IG L+NL +L L
Sbjct: 463 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522
Query: 270 KNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---------------NFIASQN-------- 306
N G+IP+ LG+ L LDL +N G NFIA +
Sbjct: 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 582
Query: 307 ------------KLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDISS 354
+ G +QL ++T P N +++ LD+S
Sbjct: 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT-FDNNGSMMFLDMSY 641
Query: 355 NQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKXXX 414
N SG IP + + L +++ N G IP +G L+ + LD+S N G+ P+
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 415 XXXXXXXXXXXYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGIDELHLPSC 465
N+L G +P G F N LCG LP C
Sbjct: 702 ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG----YPLPRC 748
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 188/430 (43%), Gaps = 56/430 (13%)
Query: 15 LQALALAGNYLTGKLPDF--IGNLSALQVIHIKGNSLGGKFPTTLGL-LRNLVQLNVAEN 71
L +L L+ N L+G + +G+ S L+ +++ N+L + GL L +L L+++ N
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161
Query: 72 KFYGMFPRSIC---NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPD 128
G L++ ++ N+ SG + VNL + L + +NNF IP
Sbjct: 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL---EFLDVSSNNFSTGIP- 217
Query: 129 SLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCS 188
L + S L+ LD+S N+ G S S+ L LN+ N +G L
Sbjct: 218 FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF-VGPIPPLPL-------K 269
Query: 189 SLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ 248
SL+ LSL++N+F GE+P ++ T+ + GN G +P + L +LA+ N
Sbjct: 270 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 329
Query: 249 LHGTIP-DVIGELKNLQLLGLYKNFLQGSIPSGLGNLT-KLAKLDLGSNSLQGNFIASQN 306
G +P D + +++ L++L L N G +P L NL+ L LDL SN+ G +
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL---- 385
Query: 307 KLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKN-LIILDISSNQFSGMIPVTL 365
P N KN L L + +N F+G IP TL
Sbjct: 386 -------------------------------PNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 366 STCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKXXXXXXXXXXXXXX 425
S C L + +S N G IP SLG L ++ L + N G+ P+
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 426 YNHLEGEVPT 435
+N L GE+P+
Sbjct: 475 FNDLTGEIPS 484
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFV 577
Q S EL A+ FS+ N++G+G FG VYKG L + ++ ++ + +G F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 578 AECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKL 637
E E + HRNL+++ C + + LV+ YM NGS+ L + + L
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLRERPESQ--PPL 136
Query: 638 SLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+R IA+ A + YLH HC P ++H D+K +N+LLD + A VGDFGLAK +
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---- 192
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
K ++GT+G++AP
Sbjct: 193 ---DYKDXHVXXAVRGTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFV 577
Q S EL A+ F + N++G+G FG VYKG L + ++ ++ + +G F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 578 AECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKL 637
E E + HRNL+++ C + + LV+ YM NGS+ L + + L
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLRERPESQ--PPL 128
Query: 638 SLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+R IA+ A + YLH HC P ++H D+K +N+LLD + A VGDFGLAK +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---- 184
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
K ++G +G++AP
Sbjct: 185 ---DYKDXHVXXAVRGXIGHIAP 204
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 520 PMVSY----AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS 575
P SY +L +AT+ F +IG G FG VYKG+L D VA+K +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEE 81
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC 635
F E E L RH +L+ +I C + L+++YM NG+L+ L+ S+ +
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDER-----NEMILIYKYMENGNLKRHLYGSD--LPTM 134
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK---F 692
+S QRL I I A + YLH ++H D+K N+LLD + V + DFG++K
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 693 LSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723
L HL +KGT+GY+ P F
Sbjct: 192 LDQTHLXXV---------VKGTLGYIDPEYF 213
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 520 PMVSY----AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS 575
P SY +L +AT+ F +IG G FG VYKG+L D VA+K +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEE 81
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC 635
F E E L RH +L+ +I C + L+++YM NG+L+ L+ S+ +
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDER-----NEMILIYKYMENGNLKRHLYGSD--LPTM 134
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK---F 692
+S QRL I I A + YLH ++H D+K N+LLD + V + DFG++K
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 693 LSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723
L HL +KGT+GY+ P F
Sbjct: 192 LGQTHLXXV---------VKGTLGYIDPEYF 213
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Query: 538 NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLIKII 595
+IG+G +G+VYKG L DE VAVKV + + ++F+ E R + H N+ + I
Sbjct: 19 ELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFI 73
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLH-QSNDQVEVCKLSLIQRLNIAIDVASAIE 654
G LV EY NGSL +L ++D V C+L A V +
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL--------AHSVTRGLA 125
Query: 655 YLH------HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
YLH H +P + H DL NVL+ +D + DFGL+ L+ + L + +++
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 709 IGIKGTVGYVAP 720
I GT+ Y+AP
Sbjct: 186 ISEVGTIRYMAP 197
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 25/185 (13%)
Query: 540 IGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFR--SFVAECEALRNIRHRNLIKII- 595
IG GSFG+V++ G D VAVK++ + A R F+ E ++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++V EY+ GSL LH+S + + L +RL++A DVA + Y
Sbjct: 102 AVTQPPNL------SIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNY 152
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
LH+ PP+VH DLK N+L+D V DFGL++ +S L + GT
Sbjct: 153 LHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--------GTP 203
Query: 716 GYVAP 720
++AP
Sbjct: 204 EWMAP 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 25/185 (13%)
Query: 540 IGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFR--SFVAECEALRNIRHRNLIKII- 595
IG GSFG+V++ G D VAVK++ + A R F+ E ++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++V EY+ GSL LH+S + + L +RL++A DVA + Y
Sbjct: 102 AVTQPPNL------SIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNY 152
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
LH+ PP+VH +LK N+L+D V DFGL++ +S L + S GT
Sbjct: 153 LHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--------GTP 203
Query: 716 GYVAP 720
++AP
Sbjct: 204 EWMAP 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAE 579
P +Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 60
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSL 639
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++
Sbjct: 61 AAVMKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVNA 111
Query: 640 IQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLD 699
+ L +A ++SA+EYL + +H DL N L+ + + V DFGL++ +
Sbjct: 112 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------ 162
Query: 700 TSSKTPSSSIGIKGTVGYVAP 720
+ T ++ G K + + AP
Sbjct: 163 -TGDTXTAHAGAKFPIKWTAP 182
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 163
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 164 DTYTAHAGAKFPIKWTAP 181
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 107/233 (45%), Gaps = 18/233 (7%)
Query: 5 IPKEIGSLFKLQALALAG-NYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IP + +L L L + G N L G +P I L+ L ++I ++ G P L ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 64 VQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFF 123
V L+ + N G P SI ++ +L NR SG++P + I N
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 124 GLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTF 183
G IP + +N NL +DLS N +G S+ F S K +++L +N+L A DLG V
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL----AFDLGKVGL 242
Query: 184 LTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFL----IGGNQISGTIPLG 232
N L L L +N+ G LP + T + FL + N + G IP G
Sbjct: 243 SKN---LNGLDLRNNRIYGTLPQGL-----TQLKFLHSLNVSFNNLCGEIPQG 287
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 102/268 (38%), Gaps = 42/268 (15%)
Query: 198 NQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVI 257
N G +P +IA L+ +++ N +SG IP + + L+ L N L GT+P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTN-VSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 258 GELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLL 317
L NL + N + G+IP G+ +KL + S+N+L G +P
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFT----------SMTISRNRLTGKIPPTFA 195
Query: 318 SITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDIS 377
++ NL +D+S N G V + + + + ++
Sbjct: 196 NL--------------------------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229
Query: 378 SNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKXXXXXXXXXXXXXXYNHLEGEVPTKG 437
N + +G K++ LD+ N G P+ +N+L GE+P G
Sbjct: 230 KNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288
Query: 438 VFSNKSKIPLQGNVRLCGGIDELHLPSC 465
N LCG LP+C
Sbjct: 289 NLQRFDVSAYANNKCLCGS----PLPAC 312
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 163
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 164 DTYTAHAGAKFPIKWTAP 181
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++ + + +G G FG VY+G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++++ +C+ + F ++ E+M G+L D+L + N Q ++S + L +A ++S
Sbjct: 70 VQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISS 120
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
A+EYL + +H DL N L+ + + V DFGL++ + + T ++ G
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGDTXTAHAGA 170
Query: 712 KGTVGYVAP 720
K + + AP
Sbjct: 171 KFPIKWTAP 179
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 524 YAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL 583
Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q ++S + L
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLL 114
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 115 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGD 164
Query: 704 TPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 165 TYTAHAGAKFPIKWTAP 181
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAE 579
P +Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 63
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSL 639
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++
Sbjct: 64 AAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNA 114
Query: 640 IQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLD 699
+ L +A ++SA+EYL + +H DL N L+ + + V DFGL++ +
Sbjct: 115 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------ 165
Query: 700 TSSKTPSSSIGIKGTVGYVAP 720
+ T ++ G K + + AP
Sbjct: 166 -TGDTYTAHAGAKFPIKWTAP 185
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++ + + +G G +G VY+G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++++ +C+ + F ++ E+M G+L D+L + N Q ++S + L +A ++S
Sbjct: 70 VQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISS 120
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
A+EYL + +H DL N L+ + + V DFGL++ + + T ++ G
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGDTXTAHAGA 170
Query: 712 KGTVGYVAP 720
K + + AP
Sbjct: 171 KFPIKWTAP 179
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 163
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 164 DTYTAHAGAKFPIKWTAP 181
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 524 YAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL 583
Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 68
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q ++S + L
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLL 119
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGD 169
Query: 704 TPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 170 TYTAHAGAKFPIKWTAP 186
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 68 MKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 168
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 169 DTYTAHAGAKFPIKWTAP 186
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 516 EKQFPMVSYAELSKATSEFSSS------NMIGQGSFGSVYKGILGEDEMIVAVK----VI 565
+ +F S+ EL T+ F N +G+G FG VYKG + + VAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 566 NLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL 625
++ + + F E + + +H NL++++ S D D LV+ YM NGSL D L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD----DL-CLVYVYMPNGSLLDRL 121
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAH 683
+ LS R IA A+ I +LH HH +H D+K +N+LLD A
Sbjct: 122 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAK 173
Query: 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIK--GTVGYVAP 720
+ DFGLA+ S K + + + GT Y+AP
Sbjct: 174 ISDFGLAR--------ASEKFAQTVMXXRIVGTTAYMAP 204
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 516 EKQFPMVSYAELSKATSEFSSS------NMIGQGSFGSVYKGILGEDEMIVAVK----VI 565
+ +F S+ EL T+ F N +G+G FG VYKG + + VAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 566 NLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL 625
++ + + F E + + +H NL++++ S D D LV+ YM NGSL D L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD----DL-CLVYVYMPNGSLLDRL 121
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAH 683
+ LS R IA A+ I +LH HH +H D+K +N+LLD A
Sbjct: 122 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAK 173
Query: 684 VGDFGLAKFLSSHHLDTSSKTPSSSIG--IKGTVGYVAP 720
+ DFGLA+ S K + + I GT Y+AP
Sbjct: 174 ISDFGLAR--------ASEKFAQTVMXSRIVGTTAYMAP 204
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 524 YAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL 583
Y E+ SE S IG GSFG+VYKG D + +KV++ + F++F E L
Sbjct: 30 YWEIE--ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAVL 86
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
R RH N++ + + + A+V ++ SL LH V+ K + Q +
Sbjct: 87 RKTRHVNILLFMGYMTKDNL------AIVTQWCEGSSLYKHLH-----VQETKFQMFQLI 135
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+IA A ++YLH ++H D+K +N+ L + +GDFGLA S +
Sbjct: 136 DIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 704 TPSSSIGIKGTVGYVAP 720
P+ G+V ++AP
Sbjct: 193 QPT------GSVLWMAP 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 68 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 168
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 169 DTXTAHAGAKFPIKWTAP 186
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 113
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 163
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 164 DTYTAHAGAKFPIKWTAP 181
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 68 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 168
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 169 DTYTAHAGAKFPIKWTAP 186
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 63
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 64 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 114
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 164
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 165 DTYTAPAGAKFPIKWTAP 182
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 113
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 163
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 164 DTYTAHAGAKFPIKWTAP 181
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 37/219 (16%)
Query: 516 EKQFPMVSYAELSKATSEFSSS------NMIGQGSFGSVYKGILGEDEMIVAVK----VI 565
+ +F S+ EL T+ F N +G+G FG VYKG + + VAVK ++
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 60
Query: 566 NLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL 625
++ + + F E + + +H NL++++ S D D LV+ YM NGSL D L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD----DL-CLVYVYMPNGSLLDRL 115
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAH 683
+ LS R IA A+ I +LH HH +H D+K +N+LLD A
Sbjct: 116 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAK 167
Query: 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIK--GTVGYVAP 720
+ DFGLA+ S K + + GT Y+AP
Sbjct: 168 ISDFGLAR--------ASEKFAQXVMXXRIVGTTAYMAP 198
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 75
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 76 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 126
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 127 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 176
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 177 DTYTAHAGAKFPIKWTAP 194
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 65 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 115
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 165
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 166 DTYTAPAGAKFPIKWTAP 183
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 65 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 115
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 165
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 166 DTYTAHAGAKFPIKWTAP 183
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 68 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 168
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 169 DTYTAHAGAKFPIKWTAP 186
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 65 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 115
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H DL N L+ + + V DFGL++ + +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TG 165
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 166 DTYTAHAGAKFPIKWTAP 183
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++ + + +G G +G VY G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 592 IKIITICS-STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
++++ +C+ F +V EYM G+L D+L + N + +++ + L +A ++
Sbjct: 91 VQLLGVCTLEPPF------YIVTEYMPYGNLLDYLRECNRE----EVTAVVLLYMATQIS 140
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIG 710
SA+EYL + +H DL N L+ + V V DFGL++ + + T ++ G
Sbjct: 141 SAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-------TGDTYTAHAG 190
Query: 711 IKGTVGYVAP 720
K + + AP
Sbjct: 191 AKFPIKWTAP 200
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 109 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 160
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 161 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++ + + +G G +G VY+G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++++ +C+ + F ++ E+M G+L D+L + N Q ++S + L +A ++S
Sbjct: 70 VQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISS 120
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
A+EYL + +H DL N L+ + + V DFGL++ + + T ++ G
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGDTFTAHAGA 170
Query: 712 KGTVGYVAP 720
K + + AP
Sbjct: 171 KFPIKWTAP 179
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 83 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 134
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 85 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 136
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 82 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 133
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 76 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 127
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 128 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 43/218 (19%)
Query: 523 SYAELSKATSEFSSS---------NMIGQGSFGSVYKGIL---GEDEMIVAVKVI----N 566
++ + ++A EF+ +IG G FG V G L G+ E+ VA+K +
Sbjct: 15 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 74
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA----LVFEYMGNGSLE 622
KQ+ R F++E + H N+I + +GV K+ ++ E+M NGSL+
Sbjct: 75 EKQR---RDFLSEASIMGQFDHPNVIHL---------EGVVTKSTPVMIITEFMENGSLD 122
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
+L Q++ Q ++IQ + + +A+ ++YL VH DL N+L++ ++V
Sbjct: 123 SFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVC 174
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
V DFGL++FL DTS T +S++G K + + AP
Sbjct: 175 KVSDFGLSRFLED---DTSDPTYTSALGGKIPIRWTAP 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 81 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 77 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 84 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 135
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 185
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 524 YAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL 583
Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 270
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q ++S + L
Sbjct: 271 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLL 321
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+A ++SA+EYL + +H +L N L+ + + V DFGL++ + +
Sbjct: 322 YMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-------TGD 371
Query: 704 TPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 372 TYTAHAGAKFPIKWTAP 388
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L + ++++ KL L + +EY
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ EY+ GSL D+L ++++ KL L + +EY
Sbjct: 81 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQYTSQICKGMEY 132
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Query: 537 SNMIGQGSFGSVYKGIL---GEDEMIVAVKVINLKQKGAF-----RSFVAECEALRNIRH 588
+IG G FG V +G L G+ E VA+K + KG + R F++E + H
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEH 76
Query: 589 RNLIKIITICSSTDFKGVDFKALVF-EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
N+I++ + +++ ++ E+M NG+L+ +L ++ Q ++IQ + +
Sbjct: 77 PNIIRLEGVVTNS------MPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGMLR 125
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
+AS + YL VH DL N+L++ ++V V DFGL++FL ++S T +S
Sbjct: 126 GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEE---NSSDPTETS 179
Query: 708 SIGIKGTVGYVAP 720
S+G K + + AP
Sbjct: 180 SLGGKIPIRWTAP 192
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 266
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 267 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 317
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H +L N L+ + + V DFGL++ + +
Sbjct: 318 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-------TG 367
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 368 DTYTAHAGAKFPIKWTAP 385
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 101/198 (51%), Gaps = 20/198 (10%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA 582
+Y + ++ + + +G G +G VY+G+ + + VAVK + + F+ E
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 308
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++ I+H NL++++ +C+ + F ++ E+M G+L D+L + N Q +++ +
Sbjct: 309 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 359
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L +A ++SA+EYL + +H +L N L+ + + V DFGL++ + +
Sbjct: 360 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-------TG 409
Query: 703 KTPSSSIGIKGTVGYVAP 720
T ++ G K + + AP
Sbjct: 410 DTYTAHAGAKFPIKWTAP 427
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 528 SKATSEFSSSNM-----IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVA 578
S+ ++F ++ +G+G+FGSV Y + +VAVK + + R F
Sbjct: 2 SRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 61
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLS 638
E E L++++H N++K +C S + + L+ EY+ GSL D+L + ++++ KL
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL- 117
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHL 698
L + +EYL +H +L N+L++++ +GDFGL K L
Sbjct: 118 ----LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
Query: 699 DTSSKTPSSS 708
K P S
Sbjct: 171 YYKVKEPGES 180
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
++ A+V ++ SL LH S + E+ KL ++IA A ++YLH
Sbjct: 89 STAPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D +GDFGLA ++ SH + + G
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 184
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 185 SILWMAP 191
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Query: 537 SNMIGQGSFGSVYKGIL---GEDEMIVAVKVINLKQKGAF-----RSFVAECEALRNIRH 588
+IG G FG V +G L G+ E VA+K + KG + R F++E + H
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEH 74
Query: 589 RNLIKIITICSSTDFKGVDFKALVF-EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
N+I++ + +++ ++ E+M NG+L+ +L ++ Q ++IQ + +
Sbjct: 75 PNIIRLEGVVTNS------MPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGMLR 123
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
+AS + YL VH DL N+L++ ++V V DFGL++FL ++S T +S
Sbjct: 124 GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEE---NSSDPTYTS 177
Query: 708 SIGIKGTVGYVAP 720
S+G K + + AP
Sbjct: 178 SLGGKIPIRWTAP 190
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 538 NMIGQGSFGSVYKGILGEDE---MIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLI 592
++G+G FGSV +G L +++ + VAVK + L + F++E +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+++ +C +G+ ++ +M G L +L S + + L L +D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS---HHLDTSSKTPSSSI 709
+EYL + +H DL N +L DM V DFGL+K + S + +K P I
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 710 GIKGTVGYVAPGK 722
I+ V K
Sbjct: 217 AIESLADRVYTSK 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ A+V ++ SL LH S + E+ KL ++IA A ++YLH
Sbjct: 89 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D +GDFGLA ++ SH + + G
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 184
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 185 SILWMAP 191
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ A+V ++ SL LH S + E+ KL ++IA A ++YLH
Sbjct: 77 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 125
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D +GDFGLA ++ SH + + G
Sbjct: 126 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 172
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 173 SILWMAP 179
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 33/194 (17%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRN 590
+ + IG GSFG+VYKG D VAVK++N+ ++F E LR RH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
++ + ++ A+V ++ SL LH + E+ KL ++IA A
Sbjct: 66 ILLFMGYSTAPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTA 114
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPS 706
++YLH ++H DLK +N+ L D+ +GDFGLA ++ SH + S
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS---- 167
Query: 707 SSIGIKGTVGYVAP 720
G++ ++AP
Sbjct: 168 ------GSILWMAP 175
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKII 595
+G+G+FGSV Y + +VAVK + + R F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+C S + + L+ E++ GSL ++L + ++++ KL L + +EY
Sbjct: 81 GVCYSAGRRNL---KLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
L +H DL N+L++++ +GDFGL K L K P S
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRN 590
+ + IG GSFG+VYKG D VAVK++N+ ++F E LR RH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
++ + + A+V ++ SL LH + E+ KL ++IA A
Sbjct: 66 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTA 114
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPS 706
++YLH ++H DLK +N+ L D+ +GDFGLA ++ SH + S
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS---- 167
Query: 707 SSIGIKGTVGYVAP 720
G++ ++AP
Sbjct: 168 ------GSILWMAP 175
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRN 590
+ + IG GSFG+VYKG D VAVK++N+ ++F E LR RH N
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
++ + + A+V ++ SL LH + E+ KL ++IA A
Sbjct: 71 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTA 119
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPS 706
++YLH ++H DLK +N+ L D+ +GDFGLA ++ SH + S
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS---- 172
Query: 707 SSIGIKGTVGYVAP 720
G++ ++AP
Sbjct: 173 ------GSILWMAP 180
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 34/195 (17%)
Query: 537 SNMIGQGSFGSVYKGIL---GEDEMIVAVKVI----NLKQKGAFRSFVAECEALRNIRHR 589
+IG G FG V G L G+ E+ VA+K + KQ+ R F++E + H
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR---RDFLSEASIMGQFDHP 68
Query: 590 NLIKIITICSSTDFKGVDFKA----LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
N+I + +GV K+ ++ E+M NGSL+ +L Q++ Q ++IQ + +
Sbjct: 69 NVIHL---------EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGM 114
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
+A+ ++YL VH L N+L++ ++V V DFGL++FL DTS T
Sbjct: 115 LRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTY 168
Query: 706 SSSIGIKGTVGYVAP 720
+S++G K + + AP
Sbjct: 169 TSALGGKIPIRWTAP 183
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRN 590
+ + IG GSFG+VYKG D VAVK++N+ ++F E LR RH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
++ + + A+V ++ SL LH + E+ KL ++IA A
Sbjct: 66 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTA 114
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPS 706
++YLH ++H DLK +N+ L D+ +GDFGLA ++ SH + S
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS---- 167
Query: 707 SSIGIKGTVGYVAP 720
G++ ++AP
Sbjct: 168 ------GSILWMAP 175
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ A+V ++ SL LH + E+ KL ++IA A ++YLH
Sbjct: 93 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 141
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D+ +GDFGLA ++ SH + S G
Sbjct: 142 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS----------G 188
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 189 SILWMAP 195
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRN 590
+ + IG GSFG+VYKG D VAVK++N+ ++F E LR RH N
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
++ + + A+V ++ SL LH + E+ KL ++IA A
Sbjct: 71 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTA 119
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPS 706
++YLH ++H DLK +N+ L D+ +GDFGLA ++ SH + S
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS---- 172
Query: 707 SSIGIKGTVGYVAP 720
G++ ++AP
Sbjct: 173 ------GSILWMAP 180
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ A+V ++ SL LH + E+ KL ++IA A ++YLH
Sbjct: 75 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 123
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D+ +GDFGLA ++ SH + S G
Sbjct: 124 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----------G 170
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 171 SILWMAP 177
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ A+V ++ SL LH + E+ KL ++IA A ++YLH
Sbjct: 100 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 148
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D+ +GDFGLA ++ SH + S G
Sbjct: 149 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----------G 195
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 196 SILWMAP 202
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ A+V ++ SL LH + E+ KL ++IA A ++YLH
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 149
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D+ +GDFGLA ++ SH + S G
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----------G 196
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 197 SILWMAP 203
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITI 597
IG GSFG+VYKG D VAVK++N+ ++F E LR RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ A+V ++ SL LH + E+ KL ++IA A ++YLH
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 149
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA----KFLSSHHLDTSSKTPSSSIGIKG 713
++H DLK +N+ L D+ +GDFGLA ++ SH + S G
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS----------G 196
Query: 714 TVGYVAP 720
++ ++AP
Sbjct: 197 SILWMAP 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 28/180 (15%)
Query: 538 NMIGQGSFGSVYKGILGEDEMI---VAVKVINLKQKGAFRSFVA----ECEALRNIRHRN 590
+ +G G+FG V +GE ++ VAVK++N +QK V E + L+ RH +
Sbjct: 17 DTLGVGTFGKVK---IGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 591 LIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
+IK+ + S+ TDF +V EY+ G L D++ + E+ L Q+ +
Sbjct: 73 IIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ------I 120
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS-HHLDTSSKTPSSS 708
SA++Y H H +VH DLKP NVLLD M A + DFGL+ +S L TS +P+ +
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+G FG V G ++ VAVK I K ++F+AE + +RH NL++++ +
Sbjct: 20 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+ KG + +V EYM GSL D+L V L L ++DV A+EYL +
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 127
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
VH DL NVL+ D VA V DFGL K SS
Sbjct: 128 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 160
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+G FG V G ++ VAVK I K ++F+AE + +RH NL++++ +
Sbjct: 29 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+ KG + +V EYM GSL D+L V L L ++DV A+EYL +
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 136
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
VH DL NVL+ D VA V DFGL K SS
Sbjct: 137 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 74 EEPI------XIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 123
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 124 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-------TARQGAKFPIKWTA 173
Query: 720 P 720
P
Sbjct: 174 P 174
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 77 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 126
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 127 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 176
Query: 720 P 720
P
Sbjct: 177 P 177
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+G FG V G ++ VAVK I K ++F+AE + +RH NL++++ +
Sbjct: 201 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+ KG + +V EYM GSL D+L V L L ++DV A+EYL +
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 308
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
VH DL NVL+ D VA V DFGL K SS
Sbjct: 309 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+G FG V G ++ VAVK I K ++F+AE + +RH NL++++ +
Sbjct: 14 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+ KG + +V EYM GSL D+L V L L ++DV A+EYL +
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 121
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
VH DL NVL+ D VA V DFGL K SS
Sbjct: 122 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ IRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 333 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 382
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 383 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 432
Query: 720 P 720
P
Sbjct: 433 P 433
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 300 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 720 P 720
P
Sbjct: 350 P 350
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 99/218 (45%), Gaps = 39/218 (17%)
Query: 518 QFPMVSYAELSKATSEFSSS------NMIGQGSFGSVYKGILGEDEMIVAVK----VINL 567
+F S+ EL T+ F N G+G FG VYKG + + VAVK ++++
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDI 59
Query: 568 KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ 627
+ + F E + +H NL++++ S D D LV+ Y NGSL D L
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGD----DL-CLVYVYXPNGSLLDRLSC 114
Query: 628 SNDQVEVCKLSLIQRLNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
+ LS R IA A+ I +LH HH +H D+K +N+LLD A +
Sbjct: 115 LDG---TPPLSWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKIS 166
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIG---IKGTVGYVAP 720
DFGLA+ +S+ + + I GT Y AP
Sbjct: 167 DFGLAR---------ASEKFAQXVXXSRIVGTTAYXAP 195
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 300 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 720 P 720
P
Sbjct: 350 P 350
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 27/166 (16%)
Query: 538 NMIGQGSFGSVYKGILGEDEMI---VAVKVINLKQKGAFRSFVA----ECEALRNIRHRN 590
+ +G G+FG V +GE ++ VAVK++N +QK V E + L+ RH +
Sbjct: 17 DTLGVGTFGKVK---IGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 591 LIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
+IK+ + S+ TDF +V EY+ G L D++ + E+ L Q+ +
Sbjct: 73 IIKLYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ------I 120
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
SA++Y H H +VH DLKP NVLLD M A + DFGL+ +S
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 75 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 124
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 125 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 174
Query: 720 P 720
P
Sbjct: 175 P 175
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q ++++ +AS + Y+
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVERM 130
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 131 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-------TARQGAKFPIKWTA 180
Query: 720 P 720
P
Sbjct: 181 P 181
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 73 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 122
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 123 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 172
Query: 720 P 720
P
Sbjct: 173 P 173
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 23/191 (12%)
Query: 535 SSSNMIGQGSFGSVYKGIL----GEDEMIVAVKVINLKQKGAFR-SFVAECEALRNIRHR 589
+ +IG G FG VYKG+L G+ E+ VA+K + R F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N+I++ + S +K + ++ EYM NG+L+ +L + + + S++Q + + +
Sbjct: 107 NIIRLEGVISK--YKPM---MIITEYMENGALDKFLREKDGE-----FSVLQLVGMLRGI 156
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
A+ ++YL + VH DL N+L++ ++V V DFGL++ L D T ++S
Sbjct: 157 AAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE----DDPEATYTTS- 208
Query: 710 GIKGTVGYVAP 720
G K + + AP
Sbjct: 209 GGKIPIRWTAP 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 250 EEPI------YIVGEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 300 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 720 P 720
P
Sbjct: 350 P 350
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q ++++ +AS + Y+
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVERM 130
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 131 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 180
Query: 720 P 720
P
Sbjct: 181 P 181
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVCEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 25/176 (14%)
Query: 540 IGQGSFGSV---YKGILGEDEMIVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLIK 593
+G+GSFG V Y G+ VA+K+IN K K + + E LR +RH ++IK
Sbjct: 21 LGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + S D +V EY GN L D++ Q + E Q+ + SA+
Sbjct: 78 LYDVIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAV 125
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS-HHLDTSSKTPSSS 708
EY H H +VH DLKP N+LLD + + DFGL+ ++ + L TS +P+ +
Sbjct: 126 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 25/176 (14%)
Query: 540 IGQGSFGSV---YKGILGEDEMIVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLIK 593
+G+GSFG V Y G+ VA+K+IN K K + + E LR +RH ++IK
Sbjct: 22 LGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + S D +V EY GN L D++ Q + E Q+ + SA+
Sbjct: 79 LYDVIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAV 126
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS-HHLDTSSKTPSSS 708
EY H H +VH DLKP N+LLD + + DFGL+ ++ + L TS +P+ +
Sbjct: 127 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 25/176 (14%)
Query: 540 IGQGSFGSV---YKGILGEDEMIVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLIK 593
+G+GSFG V Y G+ VA+K+IN K K + + E LR +RH ++IK
Sbjct: 12 LGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + S D +V EY GN L D++ Q + E Q+ + SA+
Sbjct: 69 LYDVIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAV 116
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS-HHLDTSSKTPSSS 708
EY H H +VH DLKP N+LLD + + DFGL+ ++ + L TS +P+ +
Sbjct: 117 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 169
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 25/176 (14%)
Query: 540 IGQGSFGSV---YKGILGEDEMIVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLIK 593
+G+GSFG V Y G+ VA+K+IN K K + + E LR +RH ++IK
Sbjct: 16 LGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + S D +V EY GN L D++ Q + E Q+ + SA+
Sbjct: 73 LYDVIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------IISAV 120
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS-HHLDTSSKTPSSS 708
EY H H +VH DLKP N+LLD + + DFGL+ ++ + L TS +P+ +
Sbjct: 121 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 173
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA-------FRSFVAECEA 582
A +E IG+G FG V+KG L +D+ +VA+K + L F+ F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
+ N+ H N++K+ + + +V E++ G L H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDL---YHRLLDKAHPIKWSV--K 124
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DHDMVAHVGDFGLAKFLSSHH 697
L + +D+A IEY+ + PP+VH DL+ N+ L + + A V DFG
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG--------- 174
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
TS ++ S G+ G ++AP
Sbjct: 175 --TSQQSVHSVSGLLGNFQWMAP 195
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM G L D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVMEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 29/174 (16%)
Query: 540 IGQGSFGSVYKGILGE--------DEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+G+G+FG V+ L E D+M+VAVK + A + F E E L N++H ++
Sbjct: 23 LGEGAFGKVF---LAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC----------KLSLIQ 641
+K +C D +VFEYM +G L +L + +L L Q
Sbjct: 80 VKFYGVCGDG-----DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
L+IA +AS + YL VH DL N L+ +++ +GDFG+++ + S
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS 185
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA-------FRSFVAECEA 582
A +E IG+G FG V+KG L +D+ +VA+K + L F+ F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
+ N+ H N++K+ + + +V E++ G D H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLDKAHPIKWSV--K 124
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DHDMVAHVGDFGLAKFLSSHH 697
L + +D+A IEY+ + PP+VH DL+ N+ L + + A V DFGL
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-------- 175
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
S ++ S G+ G ++AP
Sbjct: 176 ---SQQSVHSVSGLLGNFQWMAP 195
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM G L D+L + L L Q +++A +AS + Y+
Sbjct: 84 EEPI------YIVTEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGLA+ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 720 P 720
P
Sbjct: 184 P 184
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+GQG FG V+ G VA+K + +F+ E + ++ +RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L Q +++A +AS + Y+
Sbjct: 251 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 300
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
VH DL+ +N+L+ ++V V DFGL + + + ++ G K + + A
Sbjct: 301 N---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY-------TARQGAKFPIKWTA 350
Query: 720 P 720
P
Sbjct: 351 P 351
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 540 IGQGSFGSV-----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKI 594
+G+G+FG V Y +D+++VAVK + A + F E E L N++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLH-QSNDQVEVC------KLSLIQRLNIAI 647
+C D +VFEYM +G L +L D V + +L+ Q L+IA
Sbjct: 81 YGVCVEG-----DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
+A+ + YL VH DL N L+ +++ +GDFG+++ + S
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS 180
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAF--RSFVAECEALRNIRH 588
SE + IG G FG V+ G L +D+ VA+K I ++GA F+ E E + + H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 59
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
L+++ +C LVFE+M +G L D+L L L + +D
Sbjct: 60 PKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 109
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
V + YL C ++H DL N L+ + V V DFG+ +F+ LD +SS
Sbjct: 110 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQY---TSS 159
Query: 709 IGIKGTVGYVAPGKF 723
G K V + +P F
Sbjct: 160 TGTKFPVKWASPEVF 174
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAF--RSFVAECEALRNIRH 588
SE + IG G FG V+ G L +D+ VA+K I ++GA F+ E E + + H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
L+++ +C LVFE+M +G L D+L L L + +D
Sbjct: 62 PKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
V + YL C ++H DL N L+ + V V DFG+ +F+ LD +SS
Sbjct: 112 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQY---TSS 161
Query: 709 IGIKGTVGYVAPGKF 723
G K V + +P F
Sbjct: 162 TGTKFPVKWASPEVF 176
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAF--RSFVAECEALRNIRH 588
SE + IG G FG V+ G L +D+ VA+K I ++GA F+ E E + + H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 64
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
L+++ +C LVFE+M +G L D+L L L + +D
Sbjct: 65 PKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 114
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
V + YL C ++H DL N L+ + V V DFG+ +F+ LD +SS
Sbjct: 115 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQY---TSS 164
Query: 709 IGIKGTVGYVAPGKF 723
G K V + +P F
Sbjct: 165 TGTKFPVKWASPEVF 179
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 172/418 (41%), Gaps = 77/418 (18%)
Query: 9 IGSLFKLQALALAGNYLTGK--LPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I +F ALA + GK + D + QV ++ + LG K + L NL Q+
Sbjct: 9 INQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI 68
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
N + N+ + P + N++ L + +N+ + P NL NL L + N +
Sbjct: 69 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL---ANLTNLTGLTLFNNQITDID 123
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L N +NL L+LS+N D S+L L L +Q N G N + + L N
Sbjct: 124 P--LKNLTNLNRLELSSNTIS-----DISALSGLTSL--QQLNFG----NQVTDLKPLAN 170
Query: 187 CSSLKVLSLSDNQFGG-ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
++L+ L +S N+ + + NL S + NQIS PLGI L NL L++
Sbjct: 171 LTTLERLDISSNKVSDISVLAKLTNLES----LIATNNQISDITPLGI--LTNLDELSLN 224
Query: 246 VNQLH--GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---- 299
NQL GT+ L NL L L N + P L LTKL +L LG+N +
Sbjct: 225 GNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 278
Query: 300 -------NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDI 352
N ++N+L P + NLKNL L +
Sbjct: 279 AGLTALTNLELNENQLEDISP---------------------------ISNLKNLTYLTL 311
Query: 353 SSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFP 410
N S + PV S+ L+ + S+N + SL L +I +L N S P
Sbjct: 312 YFNNISDISPV--SSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 365
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGLA+ L
Sbjct: 188 VSDFGLARVLED 199
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLI 592
++IG+G+FG V K + +D + + + +K+ K R F E E L + H N+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKLSLIQR 642
++ C + +G + L EY +G+L D+L +S LS Q
Sbjct: 80 NLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L+ A DVA ++YL Q +H DL N+L+ + VA + DFGL++ + T
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 703 KTPSSSIGIK 712
+ P + I+
Sbjct: 192 RLPVRWMAIE 201
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLI 592
++IG+G+FG V K + +D + + + +K+ K R F E E L + H N+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKLSLIQR 642
++ C + +G + L EY +G+L D+L +S LS Q
Sbjct: 90 NLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L+ A DVA ++YL Q +H DL N+L+ + VA + DFGL++ + T
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 703 KTPSSSIGIK 712
+ P + I+
Sbjct: 202 RLPVRWMAIE 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 36/203 (17%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA-------FRSFVAECEA 582
A +E IG+G FG V+KG L +D+ +VA+K + L F+ F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
+ N+ H N++K+ + + +V E++ G D H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLDKAHPIKWSV--K 124
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DHDMVAHVGDFGLAKFLSSHH 697
L + +D+A IEY+ + PP+VH DL+ N+ L + + A V DF L
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-------- 175
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
S ++ S G+ G ++AP
Sbjct: 176 ---SQQSVHSVSGLLGNFQWMAP 195
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 21/174 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIKII- 595
+G+GSFG V + + VA+K I+ LK+ E L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
I + TD +V EY G G L D++ + E Q+ + AIEY
Sbjct: 77 VITTPTDI------VMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQ------IICAIEY 123
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS-HHLDTSSKTPSSS 708
H H +VH DLKP N+LLD ++ + DFGL+ ++ + L TS +P+ +
Sbjct: 124 CHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 174
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 188 VSDFGLSRVLED 199
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 22 DPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 81
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 82 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 133
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 134 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 185
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 186 VSDFGLSRVLED 197
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 188 VSDFGLSRVLED 199
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKI 594
+G+G FG V Y VAVK + + G E E LRN+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
IC+ G+ L+ E++ +GSL+++L ++ + K++L Q+L A+ + ++
Sbjct: 89 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 140
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
YL VH DL NVL++ + +GDFGL K + + + K S
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 191
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRH 588
SE + IG G FG V+ G L +D+ VA+K I ++G+ F+ E E + + H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---KEGSMSEDDFIEEAEVMMKLSH 81
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
L+++ +C LVFE+M +G L D+L L L + +D
Sbjct: 82 PKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 131
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
V + YL C ++H DL N L+ + V V DFG+ +F+ LD +SS
Sbjct: 132 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQY---TSS 181
Query: 709 IGIKGTVGYVAPGKF 723
G K V + +P F
Sbjct: 182 TGTKFPVKWASPEVF 196
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKI 594
+G+G FG V Y VAVK + + G E E LRN+ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
IC+ G+ L+ E++ +GSL+++L ++ + K++L Q+L A+ + ++
Sbjct: 77 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 128
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
YL VH DL NVL++ + +GDFGL K + + + K S
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 179
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 188 VSDFGLSRVLED 199
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFV-AECEALRNIRHRN 590
++F +G+G FG V++ D+ A+K I L + R V E +AL + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 591 LIKIIT--ICSSTDFKGVDFKALVFEYMG-----NGSLEDWLHQSNDQVEVCKLSLIQR- 642
+++ + +T K V+ Y+ +L+DW++ C + +R
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR------CTIEERERS 118
Query: 643 --LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
L+I + +A A+E+LH ++H DLKPSN+ D V VGDFGL + +
Sbjct: 119 VCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 701 SSKTP----SSSIGIKGTVGYVAPGK 722
+ TP + G GT Y++P +
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQ 201
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 512 TSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI-LGEDEMI---VAVKVINL 567
T+P + Q ++ EL + ++G G+FG+VYKGI + E E + VA+K++N
Sbjct: 25 TAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE 77
Query: 568 KQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLH 626
A F+ E + ++ H +L++++ +C S + LV + M +G L +++H
Sbjct: 78 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH 131
Query: 627 QSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686
+ D + L LN + +A + YL +VH DL NVL+ + D
Sbjct: 132 EHKDNIGSQLL-----LNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITD 183
Query: 687 FGLAKFLS 694
FGLA+ L
Sbjct: 184 FGLARLLE 191
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 37/214 (17%)
Query: 523 SYAELSKATSEFSSS---------NMIGQGSFGSVYKGIL---GEDEMIVAVKVINL--- 567
+Y + ++A EF+ +IG G FG V G L G+ E+ VA+K + +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 568 -KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLH 626
KQ+ R F+ E + H N+I + + + + K V +V EYM NGSL+ +L
Sbjct: 64 EKQR---RDFLGEASIMGQFDHPNIIHLEGVVTKS--KPV---MIVTEYMENGSLDTFLK 115
Query: 627 QSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686
+++ Q ++IQ + + +++ ++YL VH DL N+L++ ++V V D
Sbjct: 116 KNDGQ-----FTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSD 167
Query: 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
FGL++ L+ + ++ G K + + AP
Sbjct: 168 FGLSRV-----LEDDPEAAYTTRGGKIPIRWTAP 196
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 188 VSDFGLSRVLED 199
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLIKI 594
+G+G FG V Y +VAVK + RS + E + LR + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
C G LV EY+ GSL D+L + + + L Q L A + +
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 148
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
YLH +H DL NVLLD+D + +GDFGLAK + H
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 188 VSDFGLSRVLED 199
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 28/173 (16%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKI 594
+G+G+FG V+ + +D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ---------SNDQVEVCKLSLIQRLNI 645
+C+ +G +VFEYM +G L +L + V L L Q L +
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 646 AIDVASAIEY---LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
A VA+ + Y LH VH DL N L+ +V +GDFG+++ + S
Sbjct: 164 ASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V EYM NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL + L
Sbjct: 188 VSDFGLGRVLED 199
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 512 TSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI-LGEDEMI---VAVKVINL 567
T+P + Q ++ EL + ++G G+FG+VYKGI + E E + VA+K++N
Sbjct: 2 TAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE 54
Query: 568 KQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLH 626
A F+ E + ++ H +L++++ +C S + LV + M +G L +++H
Sbjct: 55 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH 108
Query: 627 QSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686
+ D + L LN + +A + YL +VH DL NVL+ + D
Sbjct: 109 EHKDNIGSQLL-----LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITD 160
Query: 687 FGLAKFLS 694
FGLA+ L
Sbjct: 161 FGLARLLE 168
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 171/418 (40%), Gaps = 77/418 (18%)
Query: 9 IGSLFKLQALALAGNYLTGK--LPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I +F ALA + GK + D + QV ++ + LG K + L NL Q+
Sbjct: 9 INQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI 68
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
N + N+ + P + N++ L + +N+ + P NL NL L + N +
Sbjct: 69 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL---ANLTNLTGLTLFNNQITDID 123
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L N +NL L+LS+N D S+L L L +Q N G N + + L N
Sbjct: 124 P--LKNLTNLNRLELSSNTIS-----DISALSGLTSL--QQLNFG----NQVTDLKPLAN 170
Query: 187 CSSLKVLSLSDNQFGG-ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
++L+ L +S N+ + + NL S + NQIS PLGI L NL L++
Sbjct: 171 LTTLERLDISSNKVSDISVLAKLTNLES----LIATNNQISDITPLGI--LTNLDELSLN 224
Query: 246 VNQLH--GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---- 299
NQL GT+ L NL L L N + P L LTKL +L LG+N +
Sbjct: 225 GNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 278
Query: 300 -------NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDI 352
N ++N+L P + NLKNL L +
Sbjct: 279 AGLTALTNLELNENQLEDISP---------------------------ISNLKNLTYLTL 311
Query: 353 SSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFP 410
N S + PV S+ L+ + +N + SL L +I +L N S P
Sbjct: 312 YFNNISDISPV--SSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 365
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAF--RSFVAECEALRNIRH 588
SE + IG G FG V+ G L +D+ VA+K I ++GA F+ E E + + H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
L+++ +C LVFE+M +G L D+L L L + +D
Sbjct: 62 PKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
V + YL + ++H DL N L+ + V V DFG+ +F+ LD +SS
Sbjct: 112 VCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQY---TSS 161
Query: 709 IGIKGTVGYVAPGKF 723
G K V + +P F
Sbjct: 162 TGTKFPVKWASPEVF 176
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLI 592
++IG+G+FG V K + +D + + + +K+ K R F E E L + H N+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKLSLIQR 642
++ C + +G + L EY +G+L D+L +S LS Q
Sbjct: 87 NLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L+ A DVA ++YL Q +H +L N+L+ + VA + DFGL++ + T
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 703 KTPSSSIGIK 712
+ P + I+
Sbjct: 199 RLPVRWMAIE 208
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL----KQKGAFRSFVAECEALR 584
+ S ++G G FG V G L + E+ VA+K + + KQ+ R F+ E +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMG 89
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
H N+I++ + + + K V +V EYM NGSL+ +L + + Q ++IQ +
Sbjct: 90 QFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 139
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ +AS ++YL VH DL N+L++ ++V V DFGL++ L
Sbjct: 140 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE 186
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL----KQKGAFRSFVAECEALR 584
+ S ++G G FG V G L + E+ VA+K + + KQ+ R F+ E +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMG 72
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
H N+I++ + + + K V +V EYM NGSL+ +L + + Q ++IQ +
Sbjct: 73 QFDHPNIIRLEGVVTKS--KPV---MIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 122
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ +AS ++YL VH DL N+L++ ++V V DFGL++ L
Sbjct: 123 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 170/418 (40%), Gaps = 76/418 (18%)
Query: 9 IGSLFKLQALALAGNYLTGK--LPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I +F ALA + GK + D + QV ++ + LG K + L NL Q+
Sbjct: 9 INQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI 68
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
N + N+ + P + N++ L + +N+ + P NL NL L + N +
Sbjct: 69 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL---ANLTNLTGLTLFNNQITDID 123
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L N +NL L+LS+N D S+L L L +Q + DL L N
Sbjct: 124 P--LKNLTNLNRLELSSNTIS-----DISALSGLTSL--QQLSFSSNQVTDLKP---LAN 171
Query: 187 CSSLKVLSLSDNQFGG-ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
++L+ L +S N+ + + NL S + NQIS PLGI L NL L++
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLES----LIATNNQISDITPLGI--LTNLDELSLN 225
Query: 246 VNQLH--GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---- 299
NQL GT+ L NL L L N + P L LTKL +L LG+N +
Sbjct: 226 GNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 279
Query: 300 -------NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDI 352
N ++N+L P + NLKNL L +
Sbjct: 280 AGLTALTNLELNENQLEDISP---------------------------ISNLKNLTYLTL 312
Query: 353 SSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFP 410
N S + PV S+ L+ + S+N + SL L +I +L N S P
Sbjct: 313 YFNNISDISPV--SSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 366
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 28/173 (16%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKI 594
+G+G+FG V+ + +D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ---------SNDQVEVCKLSLIQRLNI 645
+C+ +G +VFEYM +G L +L + V L L Q L +
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 646 AIDVASAIEY---LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
A VA+ + Y LH VH DL N L+ +V +GDFG+++ + S
Sbjct: 135 ASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 181
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 28/173 (16%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKI 594
+G+G+FG V+ + +D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ---------SNDQVEVCKLSLIQRLNI 645
+C+ +G +VFEYM +G L +L + V L L Q L +
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 646 AIDVASAIEY---LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
A VA+ + Y LH VH DL N L+ +V +GDFG+++ + S
Sbjct: 141 ASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 187
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 169/418 (40%), Gaps = 76/418 (18%)
Query: 9 IGSLFKLQALALAGNYLTGK--LPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I +F ALA + GK + D + QV ++ + LG K + L NL Q+
Sbjct: 9 INQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI 68
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
N + N+ + P + N++ L + +N+ + P NL NL L + N +
Sbjct: 69 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL---ANLTNLTGLTLFNNQITDID 123
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L N +NL L+LS+N D S+L L L +Q N DL L N
Sbjct: 124 P--LKNLTNLNRLELSSNTIS-----DISALSGLTSL--QQLNFSSNQVTDLKP---LAN 171
Query: 187 CSSLKVLSLSDNQFGG-ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
++L+ L +S N+ + + NL S + NQIS PLGI L NL L++
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLES----LIATNNQISDITPLGI--LTNLDELSLN 225
Query: 246 VNQLH--GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---- 299
NQL GT+ L NL L L N + P L LTKL +L LG+N +
Sbjct: 226 GNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 279
Query: 300 -------NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDI 352
N ++N+L P + NLKNL L +
Sbjct: 280 AGLTALTNLELNENQLEDISP---------------------------ISNLKNLTYLTL 312
Query: 353 SSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFP 410
N S + PV S+ L+ + +N + SL L +I +L N S P
Sbjct: 313 YFNNISDISPV--SSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 366
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 28/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAF--RSFVAECEALRNIRH 588
SE + IG G FG V+ G L +D+ VA+K I ++GA F+ E E + + H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
L+++ +C LV E+M +G L D+L L L + +D
Sbjct: 63 PKLVQLYGVCLEQAPI-----CLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLD 112
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
V + YL C ++H DL N L+ + V V DFG+ +F+ LD +SS
Sbjct: 113 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQY---TSS 162
Query: 709 IGIKGTVGYVAPGKF 723
G K V + +P F
Sbjct: 163 TGTKFPVKWASPEVF 177
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 33/169 (19%)
Query: 538 NMIGQGSFGSVYKGILGEDEMI---VAVKVINLKQK-------GAFRSFVAECEALRNIR 587
+ +G G+FG V +G+ E+ VAVK++N +QK G R E + L+ R
Sbjct: 22 DTLGVGTFGKVK---VGKHELTGHKVAVKILN-RQKIRSLDVVGKIRR---EIQNLKLFR 74
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H ++IK+ + S+ +D +V EY+ G L D++ ++ E L Q+
Sbjct: 75 HPHIIKLYQVISTPSDI------FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ---- 124
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
+ S ++Y H H +VH DLKP NVLLD M A + DFGL+ +S
Sbjct: 125 --ILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 29 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 86 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 135
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 136 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 185
Query: 719 AP 720
AP
Sbjct: 186 AP 187
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 133
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 183
Query: 719 AP 720
AP
Sbjct: 184 AP 185
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 30 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 87 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 136
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 137 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 186
Query: 719 AP 720
AP
Sbjct: 187 AP 188
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 26 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 83 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 132
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 133 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 182
Query: 719 AP 720
AP
Sbjct: 183 AP 184
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 133
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 183
Query: 719 AP 720
AP
Sbjct: 184 AP 185
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 31 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 88 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 137
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 138 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 187
Query: 719 AP 720
AP
Sbjct: 188 AP 189
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 43/217 (19%)
Query: 523 SYAELSKATSEFSSS---------NMIGQGSFGSVYKGIL---GEDEMIVAVKVINL--- 567
++ + ++A EF+ +IG G FG V G L G+ E+ VA+K +
Sbjct: 11 TFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT 70
Query: 568 -KQKGAFRSFVAECEALRNIRHRNLIK---IITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F++E + H N+I ++T C ++ EYM NGSL+
Sbjct: 71 DKQR---RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDA 119
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L +++ + ++IQ + + + S ++YL VH DL N+L++ ++V
Sbjct: 120 FLRKNDG-----RFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCK 171
Query: 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
V DFG+++ L+ + ++ G K + + AP
Sbjct: 172 VSDFGMSRV-----LEDDPEAAYTTRGGKIPIRWTAP 203
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 23 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 80 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 129
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 130 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 179
Query: 719 AP 720
AP
Sbjct: 180 AP 181
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 177
Query: 719 AP 720
AP
Sbjct: 178 AP 179
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 172/418 (41%), Gaps = 77/418 (18%)
Query: 9 IGSLFKLQALALAGNYLTGK--LPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I +F ALA + GK + D + QV ++ + LG K + L NL Q+
Sbjct: 13 INQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI 72
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
N + N+ + P + N++ L + +N+ + P NL NL L + N +
Sbjct: 73 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL---ANLTNLTGLTLFNNQITDID 127
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L N +NL L+LS+N D S+L L L +Q + G N + + L N
Sbjct: 128 P--LKNLTNLNRLELSSNTIS-----DISALSGLTSL--QQLSFG----NQVTDLKPLAN 174
Query: 187 CSSLKVLSLSDNQFGG-ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
++L+ L +S N+ + + NL S + NQIS PLGI L NL L++
Sbjct: 175 LTTLERLDISSNKVSDISVLAKLTNLES----LIATNNQISDITPLGI--LTNLDELSLN 228
Query: 246 VNQLH--GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---- 299
NQL GT+ L NL L L N + P L LTKL +L LG+N +
Sbjct: 229 GNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 282
Query: 300 -------NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDI 352
N ++N+L P + NLKNL L +
Sbjct: 283 AGLTALTNLELNENQLEDISP---------------------------ISNLKNLTYLTL 315
Query: 353 SSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFP 410
N S + PV S+ L+ + ++N + SL L +I +L N S P
Sbjct: 316 YFNNISDISPV--SSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP 369
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 177
Query: 719 AP 720
AP
Sbjct: 178 AP 179
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLIKI 594
+G+G FG V Y +VAVK + RS + E + LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
C K + LV EY+ GSL D+L + + + L Q L A + +
Sbjct: 82 KGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
YLH +H +L NVLLD+D + +GDFGLAK + H
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 22 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 79 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 128
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 129 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 178
Query: 719 AP 720
AP
Sbjct: 179 AP 180
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITI 597
IG+G FG V++G +E VAVK+ + +++ RS+ E E + + RH N++ I
Sbjct: 37 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ + LV +Y +GSL D+L++ VE + +A+ AS + +LH
Sbjct: 92 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLH 143
Query: 658 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+P + H DLK N+L+ + + D GLA S DT P+ +G K
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTK 202
Query: 713 GTVGYVAP 720
Y+AP
Sbjct: 203 ---RYMAP 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRH 588
+ S+F ++GQG+FG V K D A+K I ++ + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 589 RNLIKIITIC-SSTDF----KGVDFKALVF---EYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+ +++ +F V K+ +F EY NG+L D +H N + + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK--------- 691
R + A+ Y+H ++H DLKP N+ +D +GDFGLAK
Sbjct: 122 FR-----QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 692 FLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
L S +L SS +S+I GT YVA
Sbjct: 174 KLDSQNLPGSSDNLTSAI---GTAMYVA 198
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 177
Query: 719 AP 720
AP
Sbjct: 178 AP 179
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLIKI 594
+G+G FG V Y +VAVK + RS + E + LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
C K + LV EY+ GSL D+L + + + L Q L A + +
Sbjct: 82 KGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
YLH +H +L NVLLD+D + +GDFGLAK + H
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITI 597
IG+G FG V++G +E VAVK+ + +++ RS+ E E + + RH N++ I
Sbjct: 50 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ + LV +Y +GSL D+L++ VE + +A+ AS + +LH
Sbjct: 105 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLH 156
Query: 658 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+P + H DLK N+L+ + + D GLA S DT P+ +G K
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTK 215
Query: 713 GTVGYVAP 720
Y+AP
Sbjct: 216 ---RYMAP 220
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G FG V+ G + VA+K + SF+ E + ++ ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+V EYM GSL D+L + L L +++A VA+ + Y+
Sbjct: 75 EEPI------YIVTEYMNKGSLLDFLKDGEGRA----LKLPNLVDMAAQVAAGMAYIERM 124
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
+H DL+ +N+L+ + ++ + DFGLA+ + + ++ G K + + A
Sbjct: 125 N---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEX-------TARQGAKFPIKWTA 174
Query: 720 P 720
P
Sbjct: 175 P 175
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH DL N ++ HD +GDFG+ +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 16 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 73 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 122
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 123 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 172
Query: 719 AP 720
AP
Sbjct: 173 AP 174
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 81
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 82 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH DL N ++ HD +GDFG+ +
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEAL-RNIR 587
S+F +IG+GSFG V +E+ AVKV+ K +K + ++E L +N++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
H L+ + F+ D V +Y+ G L L Q E C L R A
Sbjct: 98 HPFLVGL-----HFSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARF-YAA 146
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ASA+ YLH +V+ DLKP N+LLD + DFGL K H+ TS+
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST----- 198
Query: 708 SIGIKGTVGYVAP 720
GT Y+AP
Sbjct: 199 ---FCGTPEYLAP 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH DL N ++ HD +GDFG+ +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH DL N ++ HD +GDFG+ +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH DL N ++ HD +GDFG+ +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 79
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 80 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH DL N ++ HD +GDFG+ +
Sbjct: 135 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V E M NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEXMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 188 VSDFGLSRVLED 199
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITI 597
IG+G FG V++G +E VAVK+ + +++ RS+ E E + + RH N++ I
Sbjct: 17 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ + LV +Y +GSL D+L++ VE + +A+ AS + +LH
Sbjct: 72 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 123
Query: 658 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+P + H DLK N+L+ + + D GLA S DT P+ +G K
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTK 182
Query: 713 GTVGYVAP 720
Y+AP
Sbjct: 183 ---RYMAP 187
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI---VAVKVINLKQ-KGAFRSFVAECEALRNI 586
+E ++G G FG+V+KG+ + E E I V +KVI K + +F++ A+ ++
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H ++++++ +C + + LV +Y+ GSL D + Q + L LN
Sbjct: 73 DHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL-----LNWG 121
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL---SSHHLDTSSK 703
+ +A + YL H MVH +L NVLL V DFG+A L L + +K
Sbjct: 122 VQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 704 TPSSSIGIK 712
TP + ++
Sbjct: 179 TPIKWMALE 187
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITI 597
IG+G FG V++G +E VAVK+ + +++ RS+ E E + + RH N++ I
Sbjct: 14 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ + LV +Y +GSL D+L++ VE + +A+ AS + +LH
Sbjct: 69 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLH 120
Query: 658 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+P + H DLK N+L+ + + D GLA S DT P+ +G K
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTK 179
Query: 713 GTVGYVAP 720
Y+AP
Sbjct: 180 ---RYMAP 184
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLIKI 594
+G+G FG V Y +VAVK + RS + E E LR + H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
C K V LV EY+ GSL D+L + + L Q L A + +
Sbjct: 77 KGCCEDQGEKSVQ---LVMEYVPLGSLRDYLPRHC-------VGLAQLLLFAQQICEGMA 126
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
YLH +H L NVLLD+D + +GDFGLAK + H
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 34/194 (17%)
Query: 537 SNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL----KQKGAFRSFVAECEALRNIRHR 589
+IG G FG V G L G+ E+ VA+K + KQ+ R F++E + H
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDFLSEASIMGQFDHP 69
Query: 590 NLIK---IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
N+I ++T C ++ EYM NGSL+ +L +++ + ++IQ + +
Sbjct: 70 NIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG-----RFTVIQLVGML 116
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPS 706
+ S ++YL VH DL N+L++ ++V V DFG+++ L+ +
Sbjct: 117 RGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRV-----LEDDPEAAY 168
Query: 707 SSIGIKGTVGYVAP 720
++ G K + + AP
Sbjct: 169 TTRGGKIPIRWTAP 182
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 540 IGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLIKI 594
+G+G FG V Y +VAVK + RS + E E LR + H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
C K V LV EY+ GSL D+L + + L Q L A + +
Sbjct: 76 KGCCEDQGEKSVQ---LVMEYVPLGSLRDYLPRHC-------VGLAQLLLFAQQICEGMA 125
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
YLH +H L NVLLD+D + +GDFGLAK + H
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 34/194 (17%)
Query: 537 SNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL----KQKGAFRSFVAECEALRNIRHR 589
+IG G FG V G L G+ E+ VA+K + KQ+ R F++E + H
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDFLSEASIMGQFDHP 75
Query: 590 NLIK---IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
N+I ++T C ++ EYM NGSL+ +L +++ + ++IQ + +
Sbjct: 76 NIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG-----RFTVIQLVGML 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPS 706
+ S ++YL VH DL N+L++ ++V V DFG+++ L+ +
Sbjct: 123 RGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRV-----LEDDPEAAY 174
Query: 707 SSIGIKGTVGYVAP 720
++ G K + + AP
Sbjct: 175 TTRGGKIPIRWTAP 188
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITI 597
IG+G FG V++G +E VAVK+ + +++ RS+ E E + + RH N++ I
Sbjct: 12 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ + LV +Y +GSL D+L++ VE + +A+ AS + +LH
Sbjct: 67 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLH 118
Query: 658 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+P + H DLK N+L+ + + D GLA S DT P+ +G K
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTK 177
Query: 713 GTVGYVAP 720
Y+AP
Sbjct: 178 ---RYMAP 182
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI---VAVKVINLKQ-KGAFRSFVAECEALRNI 586
+E ++G G FG+V+KG+ + E E I V +KVI K + +F++ A+ ++
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H ++++++ +C + + LV +Y+ GSL D + Q + L LN
Sbjct: 91 DHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL-----LNWG 139
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH---LDTSSK 703
+ +A + YL H MVH +L NVLL V DFG+A L L + +K
Sbjct: 140 VQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 704 TPSSSIGIK 712
TP + ++
Sbjct: 197 TPIKWMALE 205
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITI 597
IG+G FG V++G +E VAVK+ + +++ RS+ E E + + RH N++ I
Sbjct: 11 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
+ + LV +Y +GSL D+L++ VE + +A+ AS + +LH
Sbjct: 66 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLH 117
Query: 658 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+P + H DLK N+L+ + + D GLA S DT P+ +G K
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTK 176
Query: 713 GTVGYVAP 720
Y+AP
Sbjct: 177 ---RYMAP 181
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 171/418 (40%), Gaps = 77/418 (18%)
Query: 9 IGSLFKLQALALAGNYLTGK--LPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I +F ALA + GK + D + QV ++ + LG K + L NL Q+
Sbjct: 14 INQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI 73
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
N + N+ + P + N++ L + +N+ + P NL NL L + N +
Sbjct: 74 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL---ANLTNLTGLTLFNNQITDID 128
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L N +NL L+LS+N D S+L L L +Q + G N + + L N
Sbjct: 129 P--LKNLTNLNRLELSSNTIS-----DISALSGLTSL--QQLSFG----NQVTDLKPLAN 175
Query: 187 CSSLKVLSLSDNQFGG-ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
++L+ L +S N+ + + NL S + NQIS PLGI L NL L++
Sbjct: 176 LTTLERLDISSNKVSDISVLAKLTNLES----LIATNNQISDITPLGI--LTNLDELSLN 229
Query: 246 VNQLH--GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---- 299
NQL GT+ L NL L L N + P L LTKL +L LG+N +
Sbjct: 230 GNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 283
Query: 300 -------NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDI 352
N ++N+L P + NLKNL L +
Sbjct: 284 AGLTALTNLELNENQLEDISP---------------------------ISNLKNLTYLTL 316
Query: 353 SSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFP 410
N S + PV S+ L+ + +N + SL L +I +L N S P
Sbjct: 317 YFNNISDISPV--SSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIR 587
ATS + IG G++G+VYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 588 ---HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ---VEVCKLSLIQ 641
H N+++++ +C+++ LVFE++ + L +L ++ E K + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
L +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 121 FLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIR 587
ATS + IG G++G+VYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 588 ---HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ---VEVCKLSLIQ 641
H N+++++ +C+++ LVFE++ + L +L ++ E K + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
L +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 121 FLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIR 587
ATS + IG G++G+VYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 588 ---HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ---VEVCKLSLIQ 641
H N+++++ +C+++ LVFE++ + L +L ++ E K + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
L +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 121 FLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 513 SPMEKQFPMVSYAELSKA--TSEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL 567
P + P + E +K + S ++G G FG V G L + E+ VA+K + +
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 568 ----KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLED 623
KQ+ R F+ E + H N+I++ + + + K V +V E M NGSL+
Sbjct: 84 GYTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTKS--KPV---MIVTEXMENGSLDS 135
Query: 624 WLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683
+L + + Q ++IQ + + +AS ++YL VH DL N+L++ ++V
Sbjct: 136 FLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCK 187
Query: 684 VGDFGLAKFLSS 695
V DFGL++ L
Sbjct: 188 VSDFGLSRVLED 199
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 30/185 (16%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + VA+K+I ++G+ F+ E + + N+ H L+++ +
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 598 CSSTD--FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
C+ F ++ EYM NG L ++L + + + +L L + DV A+EY
Sbjct: 88 CTKQRPIF-------IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEY 135
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L +H DL N L++ V V DFGL++++ LD +SS+G K V
Sbjct: 136 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEE---TSSVGSKFPV 185
Query: 716 GYVAP 720
+ P
Sbjct: 186 RWSPP 190
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 513 SPMEKQFPMVSYAELSKATSE-FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG 571
+P +Q + L+K E F +G+GS+GSVYK I E IVA+K + + +
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ES 66
Query: 572 AFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ 631
+ + E ++ +++K + FK D +V EY G GS+ D + N
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYY----GSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKT 121
Query: 632 VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ +++ I + + +EYLH + +H D+K N+LL+ + A + DFG+A
Sbjct: 122 LTEDEIATILQSTL-----KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAG 173
Query: 692 FLSS 695
L+
Sbjct: 174 QLTD 177
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-----GAFRSFVAEC 580
++ + + +G+G F +VYK IVA+K I L + G R+ + E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 581 EALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+ L+ + H N+I ++ F +LVF++M LE + D V S I
Sbjct: 64 KLLQELSHPNIIGLLDA-----FGHKSNISLVFDFM-ETDLEVII---KDNSLVLTPSHI 114
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
+ + +EYLH H ++H DLKP+N+LLD + V + DFGLAK S
Sbjct: 115 KAYMLM--TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 169/418 (40%), Gaps = 76/418 (18%)
Query: 9 IGSLFKLQALALAGNYLTGK--LPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I +F ALA + GK + D + QV ++ + LG K + L NL Q+
Sbjct: 9 INQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQI 68
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
N + N+ + P + N++ L + +N+ + P NL NL L + N +
Sbjct: 69 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPL---ANLTNLTGLTLFNNQITDID 123
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L N +NL L+LS+N D S+L L L +Q + DL L N
Sbjct: 124 P--LKNLTNLNRLELSSNTIS-----DISALSGLTSL--QQLSFSSNQVTDLKP---LAN 171
Query: 187 CSSLKVLSLSDNQFGG-ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
++L+ L +S N+ + + NL S + NQIS PLGI L NL L++
Sbjct: 172 LTTLERLDISSNKVSDISVLAKLTNLES----LIATNNQISDITPLGI--LTNLDELSLN 225
Query: 246 VNQLH--GTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG---- 299
NQL GT+ L NL L L N + P L LTKL +L LG+N +
Sbjct: 226 GNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 279
Query: 300 -------NFIASQNKLIGALPQQLLSITTXXXXXXXXXXXXXXXXPQQVGNLKNLIILDI 352
N ++N+L P + NLKNL L +
Sbjct: 280 AGLTALTNLELNENQLEDISP---------------------------ISNLKNLTYLTL 312
Query: 353 SSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFP 410
N S + PV S+ L+ + +N + SL L +I +L N S P
Sbjct: 313 YFNNISDISPV--SSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 366
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVIN---LKQKGAFRSFVAECEALR 584
+ + ++G+GSFG V IL +D++ AVKVI+ +KQK S + E + L+
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H N++K+ F+ + LV E G L D + + + S +
Sbjct: 88 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 136
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTS 701
I V S I Y+H + +VH DLKP N+LL+ D + DFGL S H + S
Sbjct: 137 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEAS 188
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 189 KKMKDKI----GTAYYIAP 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDE---MIVAVKVI--NLKQKGAFRSFVAECEALRNI 586
+F+ M+G+G FGSV + L +++ + VAVK++ ++ F+ E ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 587 RHRNLIKIITICSSTDFKG-VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
H ++ K++ + + KG + ++ +M +G L +L S L L +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS---HHLDTSS 702
+D+A +EYL +H DL N +L DM V DFGL++ + S + +S
Sbjct: 143 MVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 703 KTPSSSIGIK 712
K P + ++
Sbjct: 200 KLPVKWLALE 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 23/170 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGIL---GEDEMIVAVKVINL----KQKGAFRSFVAECEALR 584
+ S ++G G FG V G L + E+ VA+K + + KQ+ R F+ E +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMG 72
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
H N+I++ + + + K V +V E M NGSL+ +L + + Q ++IQ +
Sbjct: 73 QFDHPNIIRLEGVVTKS--KPV---MIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVG 122
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ +AS ++YL VH DL N+L++ ++V V DFGL++ L
Sbjct: 123 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 30/185 (16%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + VA+K+I ++G+ F+ E + + N+ H L+++ +
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 598 CSSTD--FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
C+ F ++ EYM NG L ++L + + + +L L + DV A+EY
Sbjct: 88 CTKQRPIF-------IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEY 135
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L +H DL N L++ V V DFGL++++ LD +SS+G K V
Sbjct: 136 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEY---TSSVGSKFPV 185
Query: 716 GYVAP 720
+ P
Sbjct: 186 RWSPP 190
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G FG V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 17 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 74 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 123
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H +L+ +N+L+ + + DFGLA+ + + ++ G K + +
Sbjct: 124 RN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 173
Query: 719 AP 720
AP
Sbjct: 174 AP 175
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 33/209 (15%)
Query: 523 SYAELSKATSEFSSS---------NMIGQGSFGSVYKGIL---GEDEMIVAVKVINL--- 567
+Y E +A F+ +IG G G V G L G+ ++ VA+K +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 568 -KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLH 626
+Q+ R F++E + H N+I++ + + +V EYM NGSL+ +L
Sbjct: 91 ERQR---RDFLSEASIMGQFDHPNIIRLEGVVTRGRLA-----MIVTEYMENGSLDTFLR 142
Query: 627 QSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686
+ Q +++Q + + V + + YL VH DL NVL+D ++V V D
Sbjct: 143 THDGQ-----FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
FGL++ L D + T I I+ T
Sbjct: 195 FGLSRVLEDDP-DAAXTTTGGKIPIRWTA 222
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + + VAVK+I ++G+ F E + + + H L+K +
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMI---KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 598 CSSTDFKGVDFK-ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
CS ++ +V EY+ NG L ++L +E +L L + DV + +L
Sbjct: 72 CSK------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFL 120
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
H +H DL N L+D D+ V DFG+ +++ LD SS+G K V
Sbjct: 121 ESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV----LDDQY---VSSVGTKFPVK 170
Query: 717 YVAPGKF 723
+ AP F
Sbjct: 171 WSAPEVF 177
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 30/185 (16%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + VA+K+I ++G+ F+ E + + N+ H L+++ +
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 598 CSSTD--FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
C+ F ++ EYM NG L ++L + + + +L L + DV A+EY
Sbjct: 73 CTKQRPIF-------IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEY 120
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L +H DL N L++ V V DFGL++++ LD +SS+G K V
Sbjct: 121 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEY---TSSVGSKFPV 170
Query: 716 GYVAP 720
+ P
Sbjct: 171 RWSPP 175
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 30/185 (16%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + VA+K+I ++G+ F+ E + + N+ H L+++ +
Sbjct: 23 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 598 CSSTD--FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
C+ F ++ EYM NG L ++L + + + +L L + DV A+EY
Sbjct: 79 CTKQRPIF-------IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L +H DL N L++ V V DFGL++++ LD +SS+G K V
Sbjct: 127 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEY---TSSVGSKFPV 176
Query: 716 GYVAP 720
+ P
Sbjct: 177 RWSPP 181
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVIN---LKQKGAFRSFVAECEALR 584
+ + ++G+GSFG V IL +D++ AVKVI+ +KQK S + E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H N++K+ F+ + LV E G L D + + + S +
Sbjct: 82 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 130
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTS 701
I V S I Y+H + +VH DLKP N+LL+ D + DFGL S H + S
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEAS 182
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 183 KKMKDKI----GTAYYIAP 197
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 26/183 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + VA+K+I ++G+ F+ E + + N+ H L+++ +
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
C+ + + ++ EYM NG L ++L + + + +L L + DV A+EYL
Sbjct: 68 CTKQ--RPI---FIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 117
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGY 717
+H DL N L++ V V DFGL++++ LD +SS+G K V +
Sbjct: 118 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEY---TSSVGSKFPVRW 167
Query: 718 VAP 720
P
Sbjct: 168 SPP 170
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 94 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 708 SIGIK 712
+ ++
Sbjct: 202 WMALE 206
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 114 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 164
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 708 SIGIK 712
+ ++
Sbjct: 222 WMALE 226
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 154 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 204
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+++L VH DL N +LD V DFGLA+ + D+ + + +K
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 26/183 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + VA+K+I ++G+ F+ E + + N+ H L+++ +
Sbjct: 16 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
C+ + + ++ EYM NG L ++L + + + +L L + DV A+EYL
Sbjct: 72 CTKQ--RPI---FIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 121
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGY 717
+H DL N L++ V V DFGL++++ LD +SS+G K V +
Sbjct: 122 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEY---TSSVGSKFPVRW 171
Query: 718 VAP 720
P
Sbjct: 172 SPP 174
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVIN---LKQKGAFRSFVAECEALR 584
+ + ++G+GSFG V IL +D++ AVKVI+ +KQK S + E + L+
Sbjct: 48 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H N++K+ F+ + LV E G L D + + + S +
Sbjct: 105 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 153
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTS 701
I V S I Y+H + +VH DLKP N+LL+ D + DFGL S H + S
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEAS 205
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 206 KKMKDKI----GTAYYIAP 220
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 87 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 137
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 708 SIGIK 712
+ ++
Sbjct: 195 WMALE 199
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 83
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 84 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH +L N ++ HD +GDFG+ +
Sbjct: 139 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 113 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 163
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 708 SIGIK 712
+ ++
Sbjct: 221 WMALE 225
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 540 IGQGSFGSVYKG-----ILGEDEMIVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 591
+GQGSFG VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VCKLSLIQRLNIAI 647
++++ + S KG +V E M +G L+ +L + E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++A + YL+ VH +L N ++ HD +GDFG+ +
Sbjct: 138 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 95 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+++L VH DL N +LD V DFGLA+ + D+ + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 33/209 (15%)
Query: 523 SYAELSKATSEFSSS---------NMIGQGSFGSVYKGIL---GEDEMIVAVKVINL--- 567
+Y E +A F+ +IG G G V G L G+ ++ VA+K +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 568 -KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLH 626
+Q+ R F++E + H N+I++ + + +V EYM NGSL+ +L
Sbjct: 91 ERQR---RDFLSEASIMGQFDHPNIIRLEGVVTRGRLA-----MIVTEYMENGSLDTFLR 142
Query: 627 QSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686
+ Q +++Q + + V + + YL VH DL NVL+D ++V V D
Sbjct: 143 THDGQ-----FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
FGL++ L D + T I I+ T
Sbjct: 195 FGLSRVLEDDP-DAAYTTTGGKIPIRWTA 222
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVIN---LKQKGAFRSFVAECEALR 584
+ + ++G+GSFG V IL +D++ AVKVI+ +KQK S + E + L+
Sbjct: 49 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H N++K+ F+ + LV E G L D + + + S +
Sbjct: 106 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 154
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTS 701
I V S I Y+H + +VH DLKP N+LL+ D + DFGL S H + S
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEAS 206
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 207 KKMKDKI----GTAYYIAP 221
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 100 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 150
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+++L VH DL N +LD V DFGLA+ + D+ + + +K
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 95 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 708 SIGIK 712
+ ++
Sbjct: 203 WMALE 207
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 95 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+++L VH DL N +LD V DFGLA+ + D+ + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 92 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 142
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 708 SIGIK 712
+ ++
Sbjct: 200 WMALE 204
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 90 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 140
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 708 SIGIK 712
+ ++
Sbjct: 198 WMALE 202
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 96 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+++L VH DL N +LD V DFGLA+ + D+ + + +K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 93 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+++L VH DL N +LD V DFGLA+ + D+ + + +K
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 94 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 708 SIGIK 712
+ ++
Sbjct: 202 WMALE 206
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 95 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 708 SIGIK 712
+ ++
Sbjct: 203 WMALE 207
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 93 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----SSHHLDTSSKTPSS 707
++YL VH DL N +LD V DFGLA+ + S H T +K P
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 708 SIGIK 712
+ ++
Sbjct: 201 WMALE 205
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 538 NMIGQGSFGSVYKGILGEDEMIVAVKVI------NLKQKGAFRSFVAECEALRNIRHRNL 591
IG+G+FG V+ G L D +VAVK +LK K F+ E L+ H N+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNI 174
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
+++I +C+ +V E + G +L ++ V L L + D A+
Sbjct: 175 VRLIGVCTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAA 224
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+EYL C +H DL N L+ V + DFG+++
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 538 NMIGQGSFGSVYKGILGEDEMIVAVKVI------NLKQKGAFRSFVAECEALRNIRHRNL 591
IG+G+FG V+ G L D +VAVK +LK K F+ E L+ H N+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNI 174
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
+++I +C+ +V E + G +L ++ V L L + D A+
Sbjct: 175 VRLIGVCTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAA 224
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+EYL C +H DL N L+ V + DFG+++
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 33/204 (16%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ-VEVC---------KLSLI 640
+I ++ C+ G + ++ EY G+L ++L +E C +LS
Sbjct: 96 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++ A VA +EYL +H DL NVL+ D V + DFGLA+ + HH+D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDY 205
Query: 701 SSKTPSSSIGIKGTVGYVAPGKFF 724
KT + + +K ++AP F
Sbjct: 206 YKKTTNGRLPVK----WMAPEALF 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRH 588
+ S+F ++GQG+FG V K D A+K I ++ + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 589 RNLIKIITIC-SSTDF----KGVDFKALVF---EYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+ +++ +F V K+ +F EY N +L D +H N + + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK--------- 691
R + A+ Y+H ++H DLKP N+ +D +GDFGLAK
Sbjct: 122 FR-----QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 692 FLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
L S +L SS +S+I GT YVA
Sbjct: 174 KLDSQNLPGSSDNLTSAI---GTAMYVA 198
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 33/204 (16%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ-VEVC---------KLSLI 640
+I ++ C+ G + ++ EY G+L ++L +E C +LS
Sbjct: 81 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++ A VA +EYL +H DL NVL+ D V + DFGLA+ + HH+D
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--HHIDY 190
Query: 701 SSKTPSSSIGIKGTVGYVAPGKFF 724
KT + + +K ++AP F
Sbjct: 191 YKKTTNGRLPVK----WMAPEALF 210
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDE---MIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
+ +IG+G FG VY G L +++ + AVK +N + G F+ E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
++ IC ++ + +V YM +G L +++ V L + + VA
Sbjct: 96 SLLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+++L VH DL N +LD V DFGLA+ + D+ + + +K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFR-----SFVAECEA 582
S ATS + IG G++G+VYK VA+K + + G S V E
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 583 LRNIR---HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ---VEVCK 636
LR + H N+++++ +C+++ LVFE++ + L +L ++ E K
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ Q L +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 124 DLMRQFLR-------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRH 588
+ S+F ++GQG+FG V K D A+K I ++ + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNH 61
Query: 589 RNLIKIITIC-SSTDF----KGVDFKALVF---EYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+ +++ +F V K+ +F EY N +L D +H N + + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK--------- 691
R + A+ Y+H ++H +LKP N+ +D +GDFGLAK
Sbjct: 122 FR-----QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 692 FLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
L S +L SS +S+I GT YVA
Sbjct: 174 KLDSQNLPGSSDNLTSAI---GTAXYVA 198
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALR 584
K +F ++G+GSF +V A+K++ + ++ E + +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
+ H +K+ F D + L F Y NG L ++ + E C R
Sbjct: 66 RLDHPFFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TR 113
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS S
Sbjct: 114 FYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ES 164
Query: 703 KTPSSSIGIKGTVGYVAP 720
K ++ + GT YV+P
Sbjct: 165 KQARANXFV-GTAQYVSP 181
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR 587
K +F ++G+GSF +V +L + I + +K R + E + R
Sbjct: 4 KKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTR 57
Query: 588 HRNLIKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
R+++ + F D + L F Y NG L ++ + E C R
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRF 112
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 113 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESK 163
Query: 704 TPSSSIGIKGTVGYVAP 720
++ + GT YV+P
Sbjct: 164 QARANXFV-GTAQYVSP 179
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR 587
K +F ++G+GSF +V +L + I + +K R + E + R
Sbjct: 3 KKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTR 56
Query: 588 HRNLIKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
R+++ + F D + L F Y NG L ++ + E C R
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRF 111
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 112 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESK 162
Query: 704 TPSSSIGIKGTVGYVAP 720
++ + GT YV+P
Sbjct: 163 QARANXFV-GTAQYVSP 178
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR 587
K +F ++G+GSF +V +L + I + +K R + E + R
Sbjct: 5 KKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTR 58
Query: 588 HRNLIKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
R+++ + F D + L F Y NG L ++ + E C R
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRF 113
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 114 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESK 164
Query: 704 TPSSSIGIKGTVGYVAP 720
++ + GT YV+P
Sbjct: 165 QARANXFV-GTAQYVSP 180
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 37/214 (17%)
Query: 523 SYAELSKATSEFSSS---------NMIGQGSFGSVYKGIL---GEDEMIVAVKVINL--- 567
+Y + ++A +F+ +IG G FG V G L G+ ++ VA+K + +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 568 -KQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLH 626
KQ+ R F+ E + H N++ + + T K V +V E+M NG+L+ +L
Sbjct: 85 EKQR---RDFLCEASIMGQFDHPNVVHLEGVV--TRGKPV---MIVIEFMENGALDAFLR 136
Query: 627 QSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686
+ + Q ++IQ + + +A+ + YL VH DL N+L++ ++V V D
Sbjct: 137 KHDGQ-----FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
FGL++ ++ + ++ G K V + AP
Sbjct: 189 FGLSRV-----IEDDPEAVYTTTGGKIPVRWTAP 217
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 26/179 (14%)
Query: 522 VSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINL--KQKGAFRSFVAE 579
VS A + + + +G+G++G VYK I VA+K I L +++G + + E
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE 83
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSND-QVEVCKLS 638
L+ ++HRN+I++ ++ L+FEY N L+ ++ ++ D + V K
Sbjct: 84 VSLLKELQHRNIIELKSVIHHN-----HRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF 137
Query: 639 LIQRLNIAIDVASAIEYLH-HHCQPPMVHGDLKPSNVLL-----DHDMVAHVGDFGLAK 691
L Q +N + + H C +H DLKP N+LL V +GDFGLA+
Sbjct: 138 LYQLIN-------GVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITI 597
IG+GSF +VYKG+ E + VA + ++ K + F E E L+ ++H N+++
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
ST KG LV E +G+L+ +L + +V K+ +++ + + +++LH
Sbjct: 94 WEST-VKGKKCIVLVTELXTSGTLKTYLK----RFKVXKIKVLR--SWCRQILKGLQFLH 146
Query: 658 HHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
PP++H DLK N+ + +GD GLA K S + + GT
Sbjct: 147 TRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----------KRASFAKAVIGTPE 195
Query: 717 YVAPGKF 723
+ AP +
Sbjct: 196 FXAPEXY 202
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 37/194 (19%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
+G FG V+K L D VAVK+ L+ K +++S E + ++H NL++ I +
Sbjct: 24 ARGRFGCVWKAQLMND--FVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFI----A 76
Query: 601 TDFKGVDFKA---LVFEYMGNGSLEDWLHQSN--DQVEVCKLSLIQRLNIAIDVASAIEY 655
+ +G + + L+ + GSL D+L + N E+C ++A ++ + Y
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYL-KGNIITWNELC--------HVAETMSRGLSY 127
Query: 656 LHHHC--------QPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTPS 706
LH +P + H D K NVLL D+ A + DFGLA +F K P
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF-------EPGKPPG 180
Query: 707 SSIGIKGTVGYVAP 720
+ G GT Y+AP
Sbjct: 181 DTHGQVGTRRYMAP 194
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITIC 598
+G G G V+ G VAVK +LKQ + +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQAGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ ++ EYM NGSL D+L + KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+H DL+ +N+L+ + + DFGLA+ + ++ G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-------TAREGAKFPIKWT 177
Query: 719 AP 720
AP
Sbjct: 178 AP 179
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 28/176 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
F+ IG+GSFG V+KGI + +VA+K+I+L++ + I
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-----------EDEIEDIQQEIT 77
Query: 594 IITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+++ C S T + G K ++ EY+G GS D L E L Q I
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 130
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
++ ++YLH + +H D+K +NVLL + DFG+A L+ + ++
Sbjct: 131 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 183
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----VC 635
++ ++++++ + S V + E M G L+ +L ++E +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N + D +GDFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V ++ L++ A + + E + ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 109 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 157
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
F+ IG+GSFG V+KGI + +VA+K+I+L++ + + I
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 72
Query: 594 IITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+++ C S T + G K ++ EY+G GS D L E L Q I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 125
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
++ ++YLH + +H D+K +NVLL + DFG+A
Sbjct: 126 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
F+ IG+GSFG V+KGI + +VA+K+I+L++ + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 594 IITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+++ C S T + G K ++ EY+G GS + D +E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIATIL 110
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
++ ++YLH + +H D+K +NVLL + DFG+A L+ + ++
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 163
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 30/185 (16%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLIKIITI 597
+G G FG V G + VA+K+I ++G+ F+ E + + N+ H L+++ +
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 598 CSSTD--FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
C+ F ++ EYM NG L ++L + + + +L L + DV A+EY
Sbjct: 73 CTKQRPIF-------IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEY 120
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L +H DL N L++ V V DFGL++++ LD +SS G K V
Sbjct: 121 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEY---TSSRGSKFPV 170
Query: 716 GYVAP 720
+ P
Sbjct: 171 RWSPP 175
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 28/164 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
F+ IG+GSFG V+KGI + +VA+K+I+L++ + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 594 IITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+++ C S T + G K ++ EY+G GS + D +E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIATIL 110
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
++ ++YLH + +H D+K +NVLL + DFG+A
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVIN---LKQKGAFRSFVAECEALR 584
+ + ++G+GSFG V IL +D++ AVKVI+ +KQK S + E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H N+ K+ F+ + LV E G L D + + + S +
Sbjct: 82 QLDHPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAAR 130
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTS 701
I V S I Y H + +VH DLKP N+LL+ D + DFGL S H + S
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEAS 182
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 183 KKXKDKI----GTAYYIAP 197
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
E ++G+G+FG V K + VA+K ++ + ++F+ E L + H N++
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIV 65
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
K+ C ++ LV EY GSL + LH + + + ++ + +
Sbjct: 66 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQG 115
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLL-DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
+ YLH ++H DLKP N+LL V + DFG A + +H +
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN----------- 164
Query: 712 KGTVGYVAPGKF 723
KG+ ++AP F
Sbjct: 165 KGSAAWMAPEVF 176
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
E ++G+G+FG V K + VA+K I + + ++F+ E L + H N++
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQI--ESESERKAFIVELRQLSRVNHPNIV 64
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
K+ C ++ LV EY GSL + LH + + + ++ + +
Sbjct: 65 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQG 114
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLL-DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
+ YLH ++H DLKP N+LL V + DFG A + +H +
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN----------- 163
Query: 712 KGTVGYVAPGKF 723
KG+ ++AP F
Sbjct: 164 KGSAAWMAPEVF 175
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 127
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ-----SNDQVEV 634
++ ++++++ + S V + E M G L+ +L +N+ V +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPAMANNPV-L 132
Query: 635 CKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 29 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 82
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 136
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 188
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 189 NXFV-GTAQYVSP 200
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 32 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 85
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 191
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 192 NXFV-GTAQYVSP 203
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYL-----LNWC 124
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G FG V+ G + VAVK + + ++F+ E ++ ++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYN-NSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+ + + EYM GSL D+L E K+ L + ++ + +A + Y+
Sbjct: 79 REEPIYI-----ITEYMAKGSLLDFLKSD----EGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
+H DL+ +NVL+ ++ + DFGLA+ + + ++ G K + + A
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 179
Query: 720 P 720
P
Sbjct: 180 P 180
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 124
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 26/188 (13%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
+G FG V+K L + VAVK+ ++ K ++++ E +L ++H N+++ I
Sbjct: 33 ARGRFGCVWKAQLLNE--YVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKR 89
Query: 601 TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC 660
VD L+ + GSL D+L + +S + +IA +A + YLH
Sbjct: 90 GTSVDVDL-WLITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDI 141
Query: 661 -------QPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTPSSSIGIK 712
+P + H D+K NVLL +++ A + DFGLA KF + K+ + G
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF-------EAGKSAGDTHGQV 194
Query: 713 GTVGYVAP 720
GT Y+AP
Sbjct: 195 GTRRYMAP 202
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 28/164 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
F+ + IG+GSFG VYKGI + +VA+K+I+L++ + + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE-----------IT 69
Query: 594 IITICSS---TDFKGVDFKA----LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+++ C S T + G K+ ++ EY+G GS D L +E ++ I R
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILR---- 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
++ ++YLH + +H D+K +NVLL + DFG+A
Sbjct: 124 -EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 35 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 88
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 142
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 194
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 195 NXFV-GTAQYVSP 206
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 30 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 83
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 189
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 190 NXFV-GTAQYVSP 201
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 32 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 85
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 191
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 192 NXFV-GTAQYVSP 203
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL---------------HQSNDQVEVC 635
+I ++ C+ G + ++ EY G+L ++L H +Q
Sbjct: 96 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ---- 146
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
LS ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 147 -LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 200
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
HH+D KT + + +K ++AP F
Sbjct: 201 HHIDXXKKTTNGRLPVK----WMAPEALF 225
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 33 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 86
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 140
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 192
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 193 NXFV-GTAQYVSP 204
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFR-SFVAE 579
E A + + S +GQGSFG VY+G+ E E VA+K +N R F+ E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 580 CEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ-----SNDQVEV 634
++ ++++++ + S V + E M G L+ +L +N+ V +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPAMANNPV-L 122
Query: 635 CKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
SL + + +A ++A + YL+ + VH DL N ++ D +GDFG+ +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 32 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 85
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 191
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 192 NXFV-GTAQYVSP 203
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 14 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 67
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 121
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 173
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 174 NXFV-GTAQYVSP 185
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 30 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 83
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 189
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 190 NXFV-GTAQYVSP 201
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 30 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 83
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 189
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 190 NAFV-GTAQYVSP 201
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 32 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 85
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 191
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 192 NXFV-GTAQYVSP 203
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK-QKGAFRSFVAECEALRNIRH 588
++S+F +G G++ +VYKG+ + VA+K + L ++G + + E ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN--DQVEVCKLSLIQRLNIA 646
N++++ + + + LVFE+M N L+ ++ + +L+L++
Sbjct: 63 ENIVRLYDVIHTENKL-----TLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H + ++H DLKP N+L++ +GDFGLA+
Sbjct: 117 L--LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 27/194 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNIRH 588
+F ++G+GSF +V A+K++ + ++ E + + + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 589 RNLIKIITICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+K+ C D K L F Y NG L ++ + E C R A
Sbjct: 97 PFFVKLY-FCFQDDEK------LYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA 144
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPS 706
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK
Sbjct: 145 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQAR 195
Query: 707 SSIGIKGTVGYVAP 720
++ + GT YV+P
Sbjct: 196 ANXFV-GTAQYVSP 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 32 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 85
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 191
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 192 NXFV-GTAQYVSP 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 31/199 (15%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
+F +IG G FG V+K D +K + + A R E +AL + H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 593 KIITICSSTDFK---------GVDFKALV--FEYMGNGSLEDWLHQSNDQVEVCKLSLIQ 641
D+ K L E+ G+LE W+ + + KL +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE----KLDKVL 123
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTS 701
L + + ++Y+H +++ DLKPSN+ L +GDFGL TS
Sbjct: 124 ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV---------TS 171
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K KGT+ Y++P
Sbjct: 172 LKNDGKRXRSKGTLRYMSP 190
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL---------------HQSNDQVEVC 635
+I ++ C+ G + ++ EY G+L ++L H +Q
Sbjct: 137 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ---- 187
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
LS ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 188 -LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 241
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
HH+D KT + + +K ++AP F
Sbjct: 242 HHIDYYKKTTNGRLPVK----WMAPEALF 266
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGED-EMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN 590
S+ ++G+G FG K E E++V ++I ++ R+F+ E + +R + H N
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-RTFLKEVKVMRCLEHPN 68
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
++K I + K ++F + EY+ G+L + + Q QR++ A D+A
Sbjct: 69 VLKFIGVLYKD--KRLNF---ITEYIKGGTLRGIIKSMDSQ-----YPWSQRVSFAKDIA 118
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
S + YLH ++H DL N L+ + V DFGLA+ +
Sbjct: 119 SGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLM 158
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 44/212 (20%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
+F +IG G FG V+K D ++ + + A R E +AL + H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 593 KIITICSSTDF---------KGVDFKA---------------LVFEYMGNGSLEDWLHQS 628
D+ + D+ + E+ G+LE W+ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 629 NDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688
+ KL + L + + ++Y+H ++H DLKPSN+ L +GDFG
Sbjct: 129 RGE----KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
L TS K KGT+ Y++P
Sbjct: 182 LV---------TSLKNDGKRTRSKGTLRYMSP 204
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 29 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 82
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 136
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 188
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 189 NSFV-GTAQYVSP 200
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 100 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 148
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 516 EKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS 575
E + P +A + ++ ++IG+G V + + AVK++ + +
Sbjct: 80 EDELP--DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE 137
Query: 576 FVAEC-EALRNIRH--RNLI---KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN 629
+ E EA R H R + IIT+ S ++ F LVF+ M G L D+L
Sbjct: 138 QLEEVREATRRETHILRQVAGHPHIITLIDS--YESSSFMFLVFDLMRKGELFDYL---- 191
Query: 630 DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689
E LS + +I + A+ +LH + +VH DLKP N+LLD +M + DFG
Sbjct: 192 --TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGF 246
Query: 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
S HL+ K + GT GY+AP
Sbjct: 247 -----SCHLEPGEKLRE----LCGTPGYLAP 268
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 126
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 33 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 86
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 140
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 192
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 193 NSFV-GTAQYVSP 204
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYL-----LNWC 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL---------------HQSNDQVEVC 635
+I ++ C+ G + ++ EY G+L ++L H +Q
Sbjct: 96 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ---- 146
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
LS ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 147 -LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 200
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
HH+D KT + + +K ++AP F
Sbjct: 201 HHIDYYKKTTNGRLPVK----WMAPEALF 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 72 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 120
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 121 VQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL---------------HQSNDQVEVC 635
+I ++ C+ G + ++ EY G+L ++L H +Q
Sbjct: 96 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ---- 146
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
LS ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 147 -LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 200
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
HH+D KT + + +K ++AP F
Sbjct: 201 HHIDYYKKTTNGRLPVK----WMAPEALF 225
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G FG V+ + VAVK + + +F+AE ++ ++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 81 KEPI------YIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 128
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
Q +H DL+ +N+L+ +V + DFGLA+ + + ++ G K + + A
Sbjct: 129 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 180
Query: 720 P 720
P
Sbjct: 181 P 181
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 85 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 133
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 134 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL---------------HQSNDQVEVC 635
+I ++ C+ G + ++ EY G+L ++L H +Q
Sbjct: 88 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ---- 138
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
LS ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 139 -LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 192
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
HH+D KT + + +K ++AP F
Sbjct: 193 HHIDYYKKTTNGRLPVK----WMAPEALF 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 81 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 129
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 130 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL---------------HQSNDQVEVC 635
+I ++ C+ G + ++ EY G+L ++L H +Q
Sbjct: 85 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ---- 135
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
LS ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 136 -LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 189
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
HH+D KT + + +K ++AP F
Sbjct: 190 HHIDYYKKTTNGRLPVK----WMAPEALF 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VAVK+I+ Q + + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F + LDT +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 540 IGQGSFGSVY-KGILGEDE----MIVAVKVINLKQKGAFRSF---VAECEALRNI-RHRN 590
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL---------------HQSNDQVEVC 635
+I ++ C+ G + ++ EY G+L ++L H +Q
Sbjct: 89 IINLLGACTQD---GPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ---- 139
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
LS ++ A VA +EYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 140 -LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-- 193
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
HH+D KT + + +K ++AP F
Sbjct: 194 HHIDYYKKTTNGRLPVK----WMAPEALF 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VAVK+I+ Q + + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F + LDT +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G FG V+ G + VAVK + + ++F+ E ++ ++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYN-NSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+ + + E+M GSL D+L E K+ L + ++ + +A + Y+
Sbjct: 78 KEEPIYI-----ITEFMAKGSLLDFLKSD----EGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
+H DL+ +NVL+ ++ + DFGLA+ + + ++ G K + + A
Sbjct: 129 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 178
Query: 720 P 720
P
Sbjct: 179 P 179
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF +V +L + I + +K R + E + R R++
Sbjct: 32 EDFKFGKILGEGSFSTV---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 85
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC-----TRFYTA- 139
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 191
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 192 NSFV-GTAQYVSP 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 34/181 (18%)
Query: 540 IGQGSFGSVYK----GILG-EDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLIK 593
IG+G+FG V++ G+L E +VAVK++ + ++ F E + + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLS--------------- 638
++ +C+ L+FEYM G L ++L + VC LS
Sbjct: 115 LLGVCAVGKPM-----CLLFEYMAYGDLNEFLRSMSPHT-VCSLSHSDLSTRARVSSPGP 168
Query: 639 ----LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
++L IA VA+ + YL VH DL N L+ +MV + DFGL++ +
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 695 S 695
S
Sbjct: 226 S 226
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G FG V+ + VAVK + + +F+AE ++ ++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 254 KEPI------YIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 301
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
Q +H DL+ +N+L+ +V + DFGLA+ + + ++ G K + + A
Sbjct: 302 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 353
Query: 720 P 720
P
Sbjct: 354 P 354
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 69 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 117
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 118 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 31/171 (18%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA---FRSFVAECEALRNIRHRN 590
FS IG GSFG+VY + +VA+K ++ K + ++ + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 591 LIKIITICSSTDFKGVDFKA----LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
I+ ++G + LV EY L ++D +EV K L Q + IA
Sbjct: 116 TIQ---------YRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 157
Query: 647 IDVASAIE---YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
A++ YLH H M+H D+K N+LL + +GDFG A ++
Sbjct: 158 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 30/173 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
F+ IG+GSFG V+KGI + +VA+K+I+L+ + I
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE-----------EAEDEIEDIQQEIT 73
Query: 594 IITICSS---TDFKGVDFKA----LVFEYMGNGSLEDWLHQSN-DQVEVCKLSLIQRLNI 645
+++ C S T + G K ++ EY+G GS D L D+ ++ +
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA--------TM 125
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHL 698
++ ++YLH + +H D+K +NVLL + DFG+A L+ +
Sbjct: 126 LKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 527 LSKATSEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLK--QKGAFRSFVAECEAL 583
L +A ++ IG+G++G V+K L VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 584 RNIR---HRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLS 638
R++ H N++++ +C+ + LVFE++ + D + + E K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ Q L +++LH H +VH DLKP N+L+ + DFGLA+ S
Sbjct: 126 MFQLLR-------GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F ++G+GSF + +L + I + +K R + E + R R++
Sbjct: 30 EDFKFGKILGEGSFSTT---VLARELATSREYAIKILEK---RHIIKENKVPYVTRERDV 83
Query: 592 IKIIT--ICSSTDFKGVDFKALVF--EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
+ + F D + L F Y NG L ++ + E C R A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS SK +
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP-----ESKQARA 189
Query: 708 SIGIKGTVGYVAP 720
+ + GT YV+P
Sbjct: 190 NXFV-GTAQYVSP 201
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 527 LSKATSEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLK--QKGAFRSFVAECEAL 583
L +A ++ IG+G++G V+K L VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 584 RNIR---HRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLS 638
R++ H N++++ +C+ + LVFE++ + D + + E K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ Q L +++LH H +VH DLKP N+L+ + DFGLA+ S
Sbjct: 126 MFQLLR-------GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 28/200 (14%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFR-SFVAECEALRNIRHR 589
+S+F +++G+G++G V IVA+K I K F + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ-------SNDQVEVCKLSLIQR 642
N+I I I F+ + ++ E M LH+ S+D ++ + Q
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYF---IYQT 121
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L A++ LH ++H DLKPSN+L++ + V DFGLA+ + D S
Sbjct: 122 LR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 703 KTPSSS--IGIKGTVGYVAP 720
T S + T Y AP
Sbjct: 172 PTGQQSGMVEFVATRWYRAP 191
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++FS +IG+G FG VY + + A+K ++ K R + + E L + R +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIM 241
Query: 592 IKIIT-------ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ +++ +C S F D + + + M G L H S V S
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRF 295
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D S K
Sbjct: 296 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKK 345
Query: 705 PSSSIGIKGTVGYVAP 720
P +S+ GT GY+AP
Sbjct: 346 PHASV---GTHGYMAP 358
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++FS +IG+G FG VY + + A+K ++ K R + + E L + R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIM 242
Query: 592 IKIIT-------ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ +++ +C S F D + + + M G L H S V S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRF 296
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D S K
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKK 346
Query: 705 PSSSIGIKGTVGYVAP 720
P +S+ GT GY+AP
Sbjct: 347 PHASV---GTHGYMAP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++FS +IG+G FG VY + + A+K ++ K R + + E L + R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIM 242
Query: 592 IKIIT-------ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ +++ +C S F D + + + M G L H S V S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRF 296
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D S K
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKK 346
Query: 705 PSSSIGIKGTVGYVAP 720
P +S+ GT GY+AP
Sbjct: 347 PHASV---GTHGYMAP 359
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 527 LSKATSEFSSSNMIGQGSFGSVYKGI-LGEDEMIVAVKVINLK--QKGAFRSFVAECEAL 583
L +A ++ IG+G++G V+K L VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 584 RNIR---HRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLS 638
R++ H N++++ +C+ + LVFE++ + D + + E K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ Q L +++LH H +VH DLKP N+L+ + DFGLA+ S
Sbjct: 126 MFQLLR-------GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 19/157 (12%)
Query: 538 NMIGQGSFGSVYKGILGEDEMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIIT 596
+ +G+G++ +VYKG + +VA+K I L+ ++GA + + E L++++H N++ +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEV--CKLSLIQRLNIAIDVASAIE 654
I + K + LVFEY+ + L+ +L + + + KL L Q L +
Sbjct: 68 IIHTE--KSL---TLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLR-------GLA 114
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
Y H + ++H DLKP N+L++ + DFGLA+
Sbjct: 115 YCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VAVK+I+ Q + + E ++ + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + LV EY G + D+L E + ++ + SA++Y
Sbjct: 73 EVIETEKTL-----YLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ------IVSAVQY 121
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F + LDT +P
Sbjct: 122 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 169
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VAV++I+ Q + + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F + LDT +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++FS +IG+G FG VY + + A+K ++ K R + + E L + R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIM 242
Query: 592 IKIIT-------ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ +++ +C S F D + + + M G L H S V S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRF 296
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D S K
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKK 346
Query: 705 PSSSIGIKGTVGYVAP 720
P +S+ GT GY+AP
Sbjct: 347 PHASV---GTHGYMAP 359
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E M VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
L VH D+ NVL+ + +GDFGL++++ +SK
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E M VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ + +GDFGL++++ S+++ + K P
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 33/172 (19%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA---FRSFVAECEALRNIRHRN 590
FS IG GSFG+VY + +VA+K ++ K + ++ + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 591 LIKIITICSSTDFKGVDFKA----LVFEY-MGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
I+ ++G + LV EY +G+ S D +EV K L Q + I
Sbjct: 77 TIQ---------YRGCYLREHTAWLVMEYCLGSAS---------DLLEVHKKPL-QEVEI 117
Query: 646 AIDVASAIE---YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
A A++ YLH H M+H D+K N+LL + +GDFG A ++
Sbjct: 118 AAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFG AK L + + ++
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFG AK L + + ++
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI------NLKQKGAFRSFVAECEA 582
++ ++ + ++G+GS+G V K + IVA+K + +K A R E +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKL 77
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDW-LHQSNDQVEVCKLSLIQ 641
L+ +RH NL+ ++ +C K LVFE++ + L+D L + +V + L Q
Sbjct: 78 LKQLRHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
+N I + H H ++H D+KP N+L+ V + DFG A+ L++
Sbjct: 133 IIN-------GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 127
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFG AK L + + ++
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G + E+ KLS A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYK---------ELQKLSKFDEQRTA 116
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 168
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 169 T-----TLCGTLDYLPP 180
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFR-SFVAECEALRNIRHR 589
+S+F +++G+G++G V IVA+K I K F + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ-------SNDQVEVCKLSLIQR 642
N+I I I F+ + ++ E M LH+ S+D ++ + Q
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYF---IYQT 121
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L A++ LH ++H DLKPSN+L++ + V DFGLA+ + D S
Sbjct: 122 LR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 703 KTPSSSIGIKGTVGYVA 719
T S G YVA
Sbjct: 172 PTGQQS----GMTEYVA 184
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VA+K+I+ Q + + E ++ + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGRE--VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + L+ EY G + D+L E S ++ + SA++Y
Sbjct: 78 EVIETEKTL-----YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------IVSAVQY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F LDT +P
Sbjct: 127 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSP 174
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++ G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFGLAK L + + ++
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 516 EKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKG 571
E + M S + IG+G FG V++GI E M VA+K N
Sbjct: 374 EDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 572 AFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ 631
F+ E +R H +++K+I + + ++ E G L +L Q
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFL-----Q 482
Query: 632 VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
V L L + A +++A+ YL VH D+ NVL+ + +GDFGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Query: 692 FL--SSHHLDTSSKTP 705
++ S+++ + K P
Sbjct: 540 YMEDSTYYKASKGKLP 555
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 35/188 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 600 STDFKGVDFKALVFEYMGNGS-------LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
F + ++ E+ G+ LE L +S QV VCK +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+ YLH + ++H DLK N+L D + DFG++ +++T
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA--------KNTRTIQRRDSFI 196
Query: 713 GTVGYVAP 720
GT ++AP
Sbjct: 197 GTPYWMAP 204
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 112
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSCHAPSSRR 164
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 165 T-----TLSGTLDYLPP 176
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 527 LSKATSE------FSSSNMIGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSF 576
++ AT E + IG+G+F V + +L E VAVK+I+ Q + +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGRE--VAVKIIDKTQLNPTSLQKL 61
Query: 577 VAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK 636
E ++ + H N++K+ + + LV EY G + D+L E
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSS 695
+ ++ + SA++Y H Q +VH DLK N+LLD DM + DFG + +F
Sbjct: 117 RAKFRQ------IVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG 167
Query: 696 HHLDTSSKTP 705
+ LDT +P
Sbjct: 168 NKLDTFCGSP 177
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR----------HR 589
+G+G++G V+K I +VAVK I F +F +A R R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKI-------FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++ ++ + + + + V LVF+YM E LH + L + + + +
Sbjct: 70 NIVNLLNVLRADNDRDV---YLVFDYM-----ETDLHAV---IRANILEPVHKQYVVYQL 118
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
I+YLH ++H D+KPSN+LL+ + V DFGL++
Sbjct: 119 IKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 510 ADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ 569
+D +EK +VS + K + F IGQG+ G+VY + VA++ +NL+Q
Sbjct: 1 SDEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN 629
+ + E +R ++ N++ + + D +V EY+ GSL D +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVV---- 108
Query: 630 DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 109 --TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162
Query: 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
++ S+ + GT ++AP
Sbjct: 163 CAQITPEQSKRST--------MVGTPYWMAP 185
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 57/249 (22%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFV-AECEALRNI 586
S+ ++F +G+G FG V++ D+ A+K I L + R V E +AL +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 587 RHRNLIKIITIC-------------------SSTDF-----KGVDFKALVFEYMGNGSLE 622
H +++ STD+ +D ++ M S +
Sbjct: 62 EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 623 DWLHQSND---------QVEVCK-----------LSLIQR-----LNIAIDVASAIEYLH 657
+ + Q Q+++C+ SL R L+I I +A A+E+LH
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 658 HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP----SSSIGIKG 713
++H DLKPSN+ D V VGDFGL + + + TP ++ G G
Sbjct: 182 SKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVG 238
Query: 714 TVGYVAPGK 722
T Y++P +
Sbjct: 239 TKLYMSPEQ 247
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 125
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFG AK L + + ++
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 137
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 189
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 190 T-----TLCGTLDYLPP 201
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +A + YL +VH DL NVL+ + DFG AK L + + ++
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++G G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFG AK L +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 27/158 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 600 STDFKGVDFKALVFEYMGNGS-------LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
F + ++ E+ G+ LE L +S QV VCK +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
+ YLH + ++H DLK N+L D + DFG++
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E M VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ +GDFGL++++ S+++ + K P
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 27/158 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 600 STDFKGVDFKALVFEYMGNGS-------LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
F + ++ E+ G+ LE L +S QV VCK +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
+ YLH + ++H DLK N+L D + DFG++
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVK---VINLKQKGAFRSFVAECEALRNIRH 588
+ F IG+G F VY+ D + VA+K + +L A + E + L+ + H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N+IK F + +V E G L + Q + + + +
Sbjct: 92 PNVIKYYA-----SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY--FVQ 144
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ SA+E++H ++H D+KP+NV + V +GD GL +F SSKT +++
Sbjct: 145 LCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF-------SSKT-TAA 193
Query: 709 IGIKGTVGYVAPGK 722
+ GT Y++P +
Sbjct: 194 HSLVGTPYYMSPER 207
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E + VA+K N F+ E +R H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 106 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 154
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ + +GDFGL++++ S+++ + K P
Sbjct: 155 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 163
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 164 T-----DLCGTLDYLPP 175
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 510 ADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ 569
+D +EK +VS + K + F IGQG+ G+VY + VA++ +NL+Q
Sbjct: 1 SDEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN 629
+ + E +R ++ N++ + + D +V EY+ GSL D +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVV---- 108
Query: 630 DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 109 --TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162
Query: 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
++ S + GT ++AP
Sbjct: 163 CAQITPEQSKRSE--------MVGTPYWMAP 185
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 163
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 164 T-----ELCGTLDYLPP 175
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++ G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 130
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 163
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 164 T-----TLCGTLDYLPP 175
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 112
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 164
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 165 T-----DLCGTLDYLPP 176
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGI-LGEDEMI-VAVKVINLKQK---GAFRSFVAECEALRNI 586
+EF ++ G+FG+VYKG+ + E E + + V + L++ A + + E + ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ ++ +++ IC ++ + L+ + M G L D++ + D + L LN
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHH 697
+ +A + YL +VH DL NVL+ + DFGLAK L +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 510 ADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ 569
+D +EK +VS + K + F IGQG+ G+VY + VA++ +NL+Q
Sbjct: 1 SDEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN 629
+ + E +R ++ N++ + + D +V EY+ GSL D +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVV---- 108
Query: 630 DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 109 --TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162
Query: 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
++ S + GT ++AP
Sbjct: 163 CAQITPEQ--------SKRSXMVGTPYWMAP 185
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G FG V+ + VAVK + + +F+AE ++ ++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 248 KEPI------YIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 295
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
Q +H DL+ +N+L+ +V + DFGLA+
Sbjct: 296 -QRNYIHRDLRAANILVSASLVCKIADFGLAR 326
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VAVK+I+ Q + + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F + LD P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 83 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 128
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 129 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 180
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 181 T-----TLCGTLDYLPP 192
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 166
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 167 T-----TLCGTLDYLPP 178
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 163
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 164 T-----DLCGTLDYLPP 175
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 516 EKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKG 571
E + M S + IG+G FG V++GI E M VA+K N
Sbjct: 374 EDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS 433
Query: 572 AFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ 631
F+ E +R H +++K+I + + ++ E G L +L Q
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFL-----Q 482
Query: 632 VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
V L L + A +++A+ YL VH D+ NVL+ +GDFGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 539
Query: 692 FL--SSHHLDTSSKTP 705
++ S+++ + K P
Sbjct: 540 YMEDSTYYKASKGKLP 555
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E + VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ + +GDFGL++++ S+++ + K P
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 116
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 168
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 169 T-----DLCGTLDYLPP 180
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E + VA+K N F+ E +R H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 83 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 131
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ + +GDFGL++++ S+++ + K P
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 116
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 168
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 169 T-----TLCGTLDYLPP 180
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 647 ---IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAPSSRR 166
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 167 T-----TLCGTLDYLPP 178
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G + E+ KLS A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYK---------ELQKLSKFDEQRTA 116
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 168
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 169 X-----XLXGTLDYLPP 180
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 28/200 (14%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFR-SFVAECEALRNIRHR 589
+S+F +++G+G++G V IVA+K I K F + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ-------SNDQVEVCKLSLIQR 642
N+I I I F+ + ++ E M LH+ S+D ++ + Q
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYF---IYQT 121
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
L A++ LH ++H DLKPSN+L++ + V DFGLA+ + D S
Sbjct: 122 LR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 703 KTPSSS--IGIKGTVGYVAP 720
T S T Y AP
Sbjct: 172 PTGQQSGMTEXVATRWYRAP 191
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 510 ADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ 569
+D +EK +VS + K + F IGQG+ G+VY + VA++ +NL+Q
Sbjct: 2 SDEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 58
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN 629
+ + E +R ++ N++ + + D +V EY+ GSL D +
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVV---- 109
Query: 630 DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 110 --TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 163
Query: 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
++ S + GT ++AP
Sbjct: 164 CAQITPEQ--------SKRSXMVGTPYWMAP 186
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K V + LV +Y+ H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 116
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 168
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 169 T-----TLCGTLDYLPP 180
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 113
Query: 647 ---IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 114 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAPSSRR 165
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 166 T-----TLCGTLDYLPP 177
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E + VA+K N F+ E +R H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 80 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ + +GDFGL++++ S+++ + K P
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 115
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 116 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 167
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 168 T-----TLCGTLDYLPP 179
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 112
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL + DFG + S DT
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT--- 166
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 167 -------LCGTLDYLPP 176
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E + VA+K N F+ E +R H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 81 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 129
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ + +GDFGL++++ S+++ + K P
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 163
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 164 T-----XLCGTLDYLPP 175
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 30/191 (15%)
Query: 538 NMIGQGSFGSVYKGILGEDEMI---VAVKVINL---KQKGAFRSFVAECEALRNIRHRNL 591
+ +G G +VY L ED ++ VA+K I + +++ + F E + H+N+
Sbjct: 17 DKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
+ +I + D LV EY+ +L +++ LS+ +N +
Sbjct: 74 VSMIDVDEEDDCY-----YLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILD 122
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
I++ H +VH D+KP N+L+D + + DFG+AK LS L ++ +
Sbjct: 123 GIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH-------V 172
Query: 712 KGTVGYVAPGK 722
GTV Y +P +
Sbjct: 173 LGTVQYFSPEQ 183
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 110
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 111 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 162
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 163 T-----TLCGTLDYLPP 174
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 540 IGQGSFGSVYKGILGEDE---MIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
IG+G FG V++GI E + VA+K N F+ E +R H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + ++ E G L +L QV L L + A +++A+ Y
Sbjct: 75 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 123
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL--SSHHLDTSSKTP 705
L VH D+ NVL+ + +GDFGL++++ S+++ + K P
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 108
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 109 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 160
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 161 T-----TLCGTLDYLPP 172
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 166
Query: 704 TPSSSIGIKGTVGYVAP 720
T + GT+ Y+ P
Sbjct: 167 T-----TLCGTLDYLPP 178
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNIRH 588
+F +G+G FG+VY + + I+A+KV+ L++ G E E ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI- 647
N++++ F L+ EY G++ E+ KLS A
Sbjct: 72 PNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSRFDEQRTATY 117
Query: 648 --DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
++A+A+ Y H ++H D+KP N+LL + + DFG + S DT
Sbjct: 118 ITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT----- 169
Query: 706 SSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 170 -----LCGTLDYLPP 179
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 24/197 (12%)
Query: 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEAL 583
+ + +F N++G+GSF VY+ + VA+K+I+ K + G + E +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
++H +++++ F+ ++ LV E NG + +L + V S +
Sbjct: 66 CQLKHPSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEAR 115
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ + + + YLH H ++H DL SN+LL +M + DFGLA L H
Sbjct: 116 HFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH------ 166
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT Y++P
Sbjct: 167 --EKHYTLCGTPNYISP 181
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VAV++I+ Q + + E ++ + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------IVSAVQY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F + LD +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSP 176
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITI 597
IG+G +G V+ G ++ VAVKV ++ S+ E E + + RH N++ I
Sbjct: 45 IGKGRYGEVWMGKWRGEK--VAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFI-- 97
Query: 598 CSSTDFKGVDFKA---LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
+ D KG L+ +Y NGSL D+L + L L +A S +
Sbjct: 98 --AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLC 148
Query: 655 YLHHHC-----QPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLS-SHHLDTSSKTPSS 707
+LH +P + H DLK N+L+ + + D GLA KF+S ++ +D P++
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP---PNT 205
Query: 708 SIGIK 712
+G K
Sbjct: 206 RVGTK 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ + L+D++ S + L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFL-HQDLKDFMDAS--ALTGIPLPLIK--SYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 540 IGQGSFGSVYKGILGE---DEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIK 593
+G GSFG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + + K +V E GSL D L + + LS A+ VA +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
YL +H DL N+LL + +GDFGL + L
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 33/197 (16%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAF---------RSFVAECEALR 584
+ ++G+G V + I AVK+I++ G+F + + E + LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 585 NIR-HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+ H N+I++ ++ F LVF+ M G L D+L ++V + + + +
Sbjct: 79 KVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIM 130
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++V A+ L+ +VH DLKP N+LLD DM + DFG S LD K
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF-----SCQLDPGEK 179
Query: 704 TPSSSIGIKGTVGYVAP 720
S + GT Y+AP
Sbjct: 180 LRS----VCGTPSYLAP 192
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNIRH 588
+F +G+G FG+VY + + I+A+KV+ L++ G E E ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI- 647
N++++ F L+ EY G++ E+ KLS A
Sbjct: 72 PNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSRFDEQRTATY 117
Query: 648 --DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
++A+A+ Y H ++H D+KP N+LL + + DFG S H +S +T
Sbjct: 118 ITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW-----SVHAPSSRRT- 168
Query: 706 SSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 169 ----TLCGTLDYLPP 179
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRHR 589
++ +G+G++G VYK + IVA+K I L + +G + + E L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSND--QVEVCKLSLIQRLNIAI 647
N++ +I + S LVFE+M L+ L ++ Q K+ L Q L
Sbjct: 80 NIVSLIDVIHSERCL-----TLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR--- 130
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + H H ++H DLKP N+L++ D + DFGLA+
Sbjct: 131 ----GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 540 IGQGSFGSVYKGILGE---DEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIK 593
+G GSFG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + + K +V E GSL D L + + LS A+ VA +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
YL +H DL N+LL + +GDFGL + L
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 525 AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECE 581
A+ A +F +G+G FG+VY + + I+A+KV+ L++ G E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 582 ALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQ 641
++RH N++++ F L+ EY G++ E+ KLS
Sbjct: 61 IQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFD 106
Query: 642 RLNIAI---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHL 698
A ++A+A+ Y H ++H D+KP N+LL G+ +A F S H
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHA 158
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+S + + GT+ Y+ P
Sbjct: 159 PSSRRA-----ALCGTLDYLPP 175
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q AF++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 538 NMIGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
+ +G+G+FGSV Y + +VAVK + R F E + L+ + ++K
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 594 IITICSSTDFKGVDFKA------LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
++GV + LV EY+ +G L D+L + +++ +L L +
Sbjct: 73 ---------YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SS 118
Query: 648 DVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
+ +EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 119 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 540 IGQGSFGSVYKGILGE---DEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIK 593
+G GSFG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + + K +V E GSL D L + + LS A+ VA +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
YL +H DL N+LL + +GDFGL + L
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ + L+D++ S + L LI+ +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFL-SMDLKDFMDAS--ALTGIPLPLIK--SYLFQ 114
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VA+K+I+ Q + + E ++ + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGRE--VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + L+ EY G + D+L E S ++ + SA++Y
Sbjct: 81 EVIETEKTL-----YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------IVSAVQY 129
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD DM + DFG + +F LD P
Sbjct: 130 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAP 177
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRHR 589
++ +G+G++G VYK + IVA+K I L + +G + + E L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSND--QVEVCKLSLIQRLNIAI 647
N++ +I + S LVFE+M L+ L ++ Q K+ L Q L
Sbjct: 80 NIVSLIDVIHSERCL-----TLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR--- 130
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + H H ++H DLKP N+L++ D + DFGLA+
Sbjct: 131 ----GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 540 IGQGSFGSVYKGILGE---DEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIK 593
+G GSFG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + + K +V E GSL D L + + LS A+ VA +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
YL +H DL N+LL + +GDFGL + L
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q AF++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ + L+D++ S + L LI+ +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFL-SMDLKDFMDAS--ALTGIPLPLIK--SYLFQ 113
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 540 IGQGSFGSVYKGILGE---DEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIK 593
+G GSFG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + + K +V E GSL D L + + LS A+ VA +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
YL +H DL N+LL + +GDFGL + L
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 540 IGQGSFGSVYKGILGE---DEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIK 593
+G GSFG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + + K +V E GSL D L + + LS A+ VA +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
YL +H DL N+LL + +GDFGL + L
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 540 IGQGSFGSVYKGILGE---DEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIK 593
+G GSFG V +G + VAVK + L Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ + + K +V E GSL D L + + LS A+ VA +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
YL +H DL N+LL + +GDFGL + L
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 166
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 167 A-----ALCGTLDYLPP 178
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRN 590
++ +IG G+ V + VA+K INL++ + + + E +A+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI--- 647
++ T F D LV + + GS+ D + + E K ++ IA
Sbjct: 70 IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILR 123
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
+V +EYLH + Q +H D+K N+LL D + DFG++ FL++ T +K +
Sbjct: 124 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 708 SIGIKGTVGYVAP 720
+ GT ++AP
Sbjct: 181 FV---GTPCWMAP 190
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 37/192 (19%)
Query: 538 NMIGQ-GSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIIT 596
+IG+ G FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 597 ICSSTDFKGVDFKALVFEYMGNGS-------LEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
F + ++ E+ G+ LE L +S QV VCK +L
Sbjct: 75 A-----FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL---------- 118
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF-LSSHHLDTSSKTPSSS 708
A+ YLH + ++H DLK N+L D GD LA F +S+ + T + S
Sbjct: 119 -DALNYLHDN---KIIHRDLKAGNILFTLD-----GDIKLADFGVSAKNTRTXIQRRDSF 169
Query: 709 IGIKGTVGYVAP 720
I GT ++AP
Sbjct: 170 I---GTPYWMAP 178
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 137
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 189
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 190 D-----DLCGTLDYLPP 201
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 525 AELSKAT---SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVA 578
AE+ K +F +G+G FG+VY +++ I+A+KV+ L+++G
Sbjct: 5 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLS 638
E E ++RH N++++ D K + L+ E+ G L L + E +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFH--DRKRI---YLMLEFAPRGELYKELQKHGRFDEQRSAT 119
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
++ L A A+ Y H + ++H D+KP N+L+ + + DFG +
Sbjct: 120 FMEEL------ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLI 592
+ +G G FG V + I + VA+K + R + E + ++ + H N++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 593 KIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
+ D L EY G L +L+Q + C L + D++S
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISS 132
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
A+ YLH + ++H DLKP N++L ++ + D G AK L L T
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE------- 182
Query: 709 IGIKGTVGYVAP 720
GT+ Y+AP
Sbjct: 183 --FVGTLQYLAP 192
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 32/189 (16%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIKII 595
M+G+GSFG V K + AVKVIN K K + + E E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLF 87
Query: 596 TICS-STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
I S+ F +V E G L D + ++ + S I V S I
Sbjct: 88 EILEDSSSF------YIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 655 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
Y+H H +VH DLKP N+LL + D + DFGL+ T + +
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKDR 183
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 184 IGTAYYIAP 192
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 525 AELSKAT---SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVA 578
AE+ K +F +G+G FG+VY +++ I+A+KV+ L+++G
Sbjct: 4 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLS 638
E E ++RH N++++ D K + L+ E+ G L L + E +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFH--DRKRI---YLMLEFAPRGELYKELQKHGRFDEQRSAT 118
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
++ L A A+ Y H + ++H D+KP N+L+ + + DFG +
Sbjct: 119 FMEEL------ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLI 592
+ +G G FG V + I + VA+K + R + E + ++ + H N++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 593 KIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
+ D L EY G L +L+Q + C L + D++S
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISS 133
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
A+ YLH + ++H DLKP N++L ++ + D G AK L L T
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE------- 183
Query: 709 IGIKGTVGYVAP 720
GT+ Y+AP
Sbjct: 184 --FVGTLQYLAP 193
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 540 IGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIIT 596
+G+G +G V++G GE+ VAVK+ + + + +S+ E E + RH N++ I
Sbjct: 45 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIA 98
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
++ L+ Y GSL D+L ++ L + L I + +AS + +L
Sbjct: 99 SDMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHL 150
Query: 657 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
H +P + H DLK N+L+ + + D GLA H ++++ +
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVGNNPR 206
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 207 VGTKRYMAP 215
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
S + +G G G V+ + + + VA+K I L + + + E + +R + H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 592 IKIITICSS-----TDFKG----VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
+K+ I TD G ++ +V EYM L + L Q E +L + Q
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEEHARLFMYQL 129
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVGDFGLAKFLSSHH 697
L ++Y+H ++H DLKP+N+ ++ D+V +GDFGLA+ + H+
Sbjct: 130 LR-------GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY 175
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAF---------RSFVAECEALR 584
+ ++G+G V + I AVK+I++ G+F + + E + LR
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 585 NIR-HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+ H N+I++ ++ F LVF+ M G L D+L ++V + + + +
Sbjct: 66 KVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIM 117
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++V A+ L+ +VH DLKP N+LLD DM + DFG S LD K
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF-----SCQLDPGEK 166
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT Y+AP
Sbjct: 167 LRE----VCGTPSYLAP 179
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q AF++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS---------FVAECEA 582
E+ S +G G+ G V + VA+K+I+ K+K A S E E
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQ 641
L+ + H +IKI + D+ +V E M G L D + + E CKL Q
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHL 698
L A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 123 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 173 MRT---------LCGTPTYLAP 185
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 538 NMIGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
+ +G+G+FGSV Y + +VAVK + R F E + L+ + ++K
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 594 IITICSSTDFKGVDFKA------LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
++GV + LV EY+ +G L D+L + +++ +L L +
Sbjct: 77 ---------YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SS 122
Query: 648 DVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
+ +EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 123 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 538 NMIGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
+ +G+G+FGSV Y + +VAVK + R F E + L+ + ++K
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 594 IITICSSTDFKGVDFKA------LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
++GV + LV EY+ +G L D+L + +++ +L L +
Sbjct: 89 ---------YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SS 134
Query: 648 DVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
+ +EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 135 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 538 NMIGQGSFGSV----YKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
+ +G+G+FGSV Y + +VAVK + R F E + L+ + ++K
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 594 IITICSSTDFKGVDFKA------LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
++GV + LV EY+ +G L D+L + +++ +L L +
Sbjct: 76 ---------YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SS 121
Query: 648 DVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
+ +EYL C VH DL N+L++ + + DFGLAK L
Sbjct: 122 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRN 590
++ +IG G+ V + VA+K INL++ + + + E +A+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI--- 647
++ T F D LV + + GS+ D + + E K ++ IA
Sbjct: 75 IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILR 128
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSS 707
+V +EYLH + Q +H D+K N+LL D + DFG++ FL++ T +K +
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 708 SIGIKGTVGYVAP 720
+ GT ++AP
Sbjct: 186 FV---GTPCWMAP 195
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHR 589
++ IG+G++G+V+K E IVA+K + L +G S + E L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 590 NLIKIITICSSTDFKGVDFK-ALVFEYMGNGSLEDWLHQSNDQV--EVCKLSLIQRLNIA 646
N++++ + S D K LVFE+ + L+ + N + E+ K L Q L
Sbjct: 62 NIVRLHDVLHS------DKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL--- 111
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 ----KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS---------FVAECEA 582
E+ S +G G+ G V + VA+K+I+ K+K A S E E
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 67
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQ 641
L+ + H +IKI + D+ +V E M G L D + + E CKL Q
Sbjct: 68 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHL 698
L A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 122 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 171
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 172 MRT---------LCGTPTYLAP 184
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS---------FVAECEA 582
E+ S +G G+ G V + VA+K+I+ K+K A S E E
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQ 641
L+ + H +IKI + D+ +V E M G L D + + E CKL Q
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHL 698
L A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 123 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 173 MRT---------LCGTPTYLAP 185
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 166
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 167 D-----DLCGTLDYLPP 178
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 536 SSNMIGQGSFGSVYKGIL---GEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
S +IG+G FG VY G ++ + A+K ++ + + +F+ E +R + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
+ +I I + ++ YM +G L ++ V L ++ + VA
Sbjct: 85 LALIGIMLPPE----GLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVAR 135
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
+EYL + VH DL N +LD V DFGLA+ + + + + + +
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 712 KGT 714
K T
Sbjct: 193 KWT 195
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 525 AELSKAT---SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVA 578
AE+ K +F +G+G FG+VY +++ I+A+KV+ L+++G
Sbjct: 4 AEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLS 638
E E ++RH N++++ D K + L+ E+ G L L + E +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFH--DRKRI---YLMLEFAPRGELYKELQKHGRFDEQRSAT 118
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
++ L A A+ Y H + ++H D+KP N+L+ + + DFG +
Sbjct: 119 FMEEL------ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS---------FVAECEA 582
E+ S +G G+ G V + VA+K+I+ K+K A S E E
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 74
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQ 641
L+ + H +IKI + D+ +V E M G L D + + E CKL Q
Sbjct: 75 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHL 698
L A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 129 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 179 MRT---------LCGTPTYLAP 191
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 510 ADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ 569
+D +EK +VS + K + F IGQG+ G+VY + VA++ +NL+Q
Sbjct: 2 SDEEILEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQ 58
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN 629
+ + E +R ++ N++ + + D +V EY+ GSL D +
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYL-----DSYLVGDELWVVMEYLAGGSLTDVV---- 109
Query: 630 DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689
E C + Q + + A+E+LH + ++H ++K N+LL D + DFG
Sbjct: 110 --TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGF 163
Query: 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
++ S+ + GT ++AP
Sbjct: 164 CAQITPEQSKRST--------MVGTPYWMAP 186
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 99 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS---------FVAECEA 582
E+ S +G G+ G V + VA+K+I+ K+K A S E E
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQ 641
L+ + H +IKI + D+ +V E M G L D + + E CKL Q
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHL 698
L A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 123 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 173 MRT---------LCGTPTYLAP 185
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 113 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 164 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 515 MEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGA 572
M KQ+ V S++ IGQG+FG V+K + VA+K + ++ ++G
Sbjct: 1 MAKQYDSVE-CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 59
Query: 573 FRSFVAECEALRNIRHRNLIKIITICSST-----DFKGVDFKALVFEYMGN---GSLEDW 624
+ + E + L+ ++H N++ +I IC + KG + LVF++ + G L +
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY--LVFDFCEHDLAGLLSNV 117
Query: 625 LHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684
L K +L + + + + + Y+H + ++H D+K +NVL+ D V +
Sbjct: 118 L---------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL 165
Query: 685 GDFGLAKFLS 694
DFGLA+ S
Sbjct: 166 ADFGLARAFS 175
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 41/223 (18%)
Query: 505 SAHNSADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEM---IVA 561
+ N +S +KQ AE K EF + +G G+F V +L E++ + A
Sbjct: 3 ARENGESSSSWKKQ------AEDIKKIFEFKET--LGTGAFSEV---VLAEEKATGKLFA 51
Query: 562 VKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGS 620
VK I K KG S E LR I+H N++ + I ++ + LV + + G
Sbjct: 52 VKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDI-----YESPNHLYLVMQLVSGGE 106
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---D 677
L D + + E +LI++ V A+ YLH + +VH DLKP N+L D
Sbjct: 107 LFDRIVEKGFYTEKDASTLIRQ------VLDAVYYLH---RMGIVHRDLKPENLLYYSQD 157
Query: 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ + DFGL+K ++ S++ GT GYVAP
Sbjct: 158 EESKIMISDFGLSK------MEGKGDVMSTAC---GTPGYVAP 191
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 113 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 164 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 70
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 71 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKN 119
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + DT+S S
Sbjct: 120 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQ 172
Query: 709 IGIKGTVGYVAP 720
+ GTV Y+ P
Sbjct: 173 V---GTVNYMPP 181
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 540 IGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIIT 596
+G+G +G V++G GE+ VAVK+ + + + +S+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIA 69
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
++ L+ Y GSL D+L ++ L + L I + +AS + +L
Sbjct: 70 SDMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 657 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
H +P + H DLK N+L+ + + D GLA H ++++ +
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVGNNPR 177
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 178 VGTKRYMAP 186
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 540 IGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIIT 596
+G+G +G V++G GE+ VAVK+ + + + +S+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIA 69
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
++ L+ Y GSL D+L ++ L + L I + +AS + +L
Sbjct: 70 SDMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 657 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
H +P + H DLK N+L+ + + D GLA H ++++ +
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM----HSQSTNQLDVGNNPR 177
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 178 VGTKRYMAP 186
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 163
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 164 X-----XLCGTLDYLPP 175
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 139 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 190 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 113
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 114 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 165
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 166 X-----XLCGTLDYLPP 177
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 517 KQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFR 574
KQ+ V S++ IGQG+FG V+K + VA+K + ++ ++G
Sbjct: 4 KQYDSVE-CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 575 SFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA---LVFEYMGN---GSLEDWLHQS 628
+ + E + L+ ++H N++ +I IC + KA LVF++ + G L + L
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL--- 119
Query: 629 NDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688
K +L + + + + + Y+H + ++H D+K +NVL+ D V + DFG
Sbjct: 120 ------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 170
Query: 689 LAKFLS 694
LA+ S
Sbjct: 171 LARAFS 176
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 32/189 (16%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIKII 595
M+G+GSFG V K + AVKVIN K K + + E E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLF 87
Query: 596 TICS-STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
I S+ F +V E G L D + ++ + S I V S I
Sbjct: 88 EILEDSSSF------YIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 655 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
Y+H H +VH DLKP N+LL + D + DFGL+ T + +
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKDR 183
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 184 IGTAYYIAP 192
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAF---------RSFVAECEALR 584
+ ++G+G V + I AVK+I++ G+F + + E + LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 585 NIR-HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+ H N+I++ ++ F LVF+ M G L D+L ++V + + + +
Sbjct: 79 KVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIM 130
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++V A+ L+ +VH DLKP N+LLD DM + DFG S LD K
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF-----SCQLDPGEK 179
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT Y+AP
Sbjct: 180 LRE----VCGTPSYLAP 192
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 66
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 67 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKN 115
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + DT+S S
Sbjct: 116 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQ 168
Query: 709 IGIKGTVGYVAP 720
+ GTV Y+ P
Sbjct: 169 V---GTVNYMPP 177
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 116 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 166
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 167 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 78
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 131
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 132 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 32/189 (16%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLIKII 595
M+G+GSFG V K + AVKVIN K K + + E E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLF 87
Query: 596 TICS-STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
I S+ F +V E G L D + ++ + S I V S I
Sbjct: 88 EILEDSSSF------YIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 655 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
Y+H H +VH DLKP N+LL + D + DFGL+ T + +
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKDR 183
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 184 IGTAYYIAP 192
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 115 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 166 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 33/202 (16%)
Query: 525 AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECE 581
A+ A +F +G+G FG+VY + I+A+KV+ L++ G E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 582 ALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQ 641
++RH N++++ F L+ EY G++ E+ KLS
Sbjct: 61 IQSHLRHPNILRLYGY-----FHDSTRVYLILEYAPLGTV---------YRELQKLSKFD 106
Query: 642 RLNIAI---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHL 698
A ++A+A+ Y H ++H D+KP N+LL G+ +A F S H
Sbjct: 107 EQRTATYITELANALSYCH---SKKVIHRDIKPENLLL-----GSAGELKIADFGWSVHA 158
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+S + + GT+ Y+ P
Sbjct: 159 PSSRRA-----ALCGTLDYLPP 175
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 99 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 105 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 156 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 81
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 134
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 142
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNI 586
A +F +G+G FG+VY + + I+A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
RH N++++ F L+ EY G++ E+ KLS A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 647 I---DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
++A+A+ Y H ++H D+KP N+LL G+ +A F S H +S +
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRR 166
Query: 704 TPSSSIGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 167 X-----XLCGTLDYLPP 178
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRS 575
P AE + +F +++G G+F V IL ED + +VA+K I K +G S
Sbjct: 8 PRWKQAEDIRDIYDFR--DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGS 62
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC 635
E L I+H N++ + I S L+ + + G L D + + E
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHL-----YLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVGDFGLAKF 692
LI V A++YLH +VH DLKP N+L LD D + DFGL+K
Sbjct: 118 ASRLI------FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 693 LSSHHLDTSSKTPSSSIGIK-GTVGYVAP 720
+ P S + GT GYVAP
Sbjct: 169 ----------EDPGSVLSTACGTPGYVAP 187
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 96
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 149
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 150 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA--ECEALRNIRHR 589
++ IG+GS+G V+K + IVA+K + +A E L+ ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
NL+ ++ + F+ LVFEY + L H+ + L++ +I
Sbjct: 63 NLVNLLEV-----FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVK--SITWQT 111
Query: 650 ASAIEYLH-HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
A+ + H H+C +H D+KP N+L+ V + DFG A+ L+
Sbjct: 112 LQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLT 153
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 90 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 140
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 141 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 90
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 143
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 85
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 138
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 139 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 86
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 87 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKN 135
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + DT+S S
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQ 188
Query: 709 IGIKGTVGYVAP 720
+ GTV Y+ P
Sbjct: 189 V---GTVNYMPP 197
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 540 IGQGSFGSVYKGI--LGEDEMIVAVKVINL-KQKGAFRSFVAECEALRNIRHRNLIKIIT 596
+G G+FGSV +G+ + + ++ VA+KV+ +K + E + + + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+C + LV E G G L +L +++ V ++ + V+ ++YL
Sbjct: 78 VCQAEAL------MLVMEMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYL 126
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
+ VH DL NVLL + A + DFGL+K L + D S T S+ K +
Sbjct: 127 E---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA---DDSYYTARSA--GKWPLK 178
Query: 717 YVAP 720
+ AP
Sbjct: 179 WYAP 182
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 82
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 135
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 136 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 69 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 118
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 113 CI---------GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 164 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 98 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 98 CI---------GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 149 IACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS---------FVAECEA 582
E+ S +G G+ G V + VA+++I+ K+K A S E E
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEI 207
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQ 641
L+ + H +IKI + D+ +V E M G L D + + E CKL Q
Sbjct: 208 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHL 698
L A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 262 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 312 MRT---------LCGTPTYLAP 324
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 167
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 168 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 125 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 176 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 156
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 212
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 213 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 142
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
+ ++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 167
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 168 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 67
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 68 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKN 116
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + DT+S S
Sbjct: 117 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQ 169
Query: 709 IGIKGTVGYVAP 720
+ GTV Y+ P
Sbjct: 170 V---GTVNYMPP 178
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 115
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 171
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 172 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 113
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 169
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 170 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 69 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 118
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
++ + +IG GSFG VY+ L + +VA+K + Q F++ E + +R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 105
Query: 594 I-ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ SS + K + LV +Y+ H S + V KL + Q
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 161
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
++ Y+H + H D+KP N+LLD D V + DFG AK L
Sbjct: 162 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS---------FVAECEA 582
E+ S +G G+ G V + VA+++I+ K+K A S E E
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEI 193
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQ 641
L+ + H +IKI + D+ +V E M G L D + + E CKL Q
Sbjct: 194 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHL 698
L A++YLH + ++H DLKP NVLL + D + + DFG +K L L
Sbjct: 248 ML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 699 DTSSKTPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 298 MRT---------LCGTPTYLAP 310
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 37/191 (19%)
Query: 538 NMIGQGSFGSVY---KGILGEDEMIVAVKVINLKQKGAFR--SFVAECEALRNIRHRNLI 592
++G G+F V+ + + G+ + A+K I K+ AFR S E L+ I+H N++
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGK---LFALKCI--KKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ I ST LV + + G L D + + E +IQ+ V SA
Sbjct: 70 TLEDIYEST-----THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------VLSA 118
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
++YLH + +VH DLKP N+L + + + DFGL+K + + T+ TP
Sbjct: 119 VKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP---- 171
Query: 710 GIKGTVGYVAP 720
GYVAP
Sbjct: 172 ------GYVAP 176
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 540 IGQGSFGSVYKGILG-----EDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIK 593
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 594 IITICSSTDFKGVDFKAL----VFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAID 648
I GV ++L + E M G L+ +L ++ + + L+++ L++A D
Sbjct: 99 CI---------GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAK 691
+A +YL + +H D+ N LL VA +GDFG+A+
Sbjct: 150 IACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 35/205 (17%)
Query: 540 IGQGSFGSVYKG-ILGEDE------MIVAVKVI-NLKQKGAFRSFVAECEALRNI-RHRN 590
+G+G+FG V +G D+ + VAVK++ + + V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKLSLI 640
+I ++ C+ G + ++ EY G+L ++L ++V +++
Sbjct: 103 IINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 641 QRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLD 699
++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +++D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNID 211
Query: 700 TSSKTPSSSIGIKGTVGYVAPGKFF 724
KT + + +K ++AP F
Sbjct: 212 XXKKTTNGRLPVK----WMAPEALF 232
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 66 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 115
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 114
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 114
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 113
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 113
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 35/205 (17%)
Query: 540 IGQGSFGSVYKG-ILGEDE------MIVAVKVI-NLKQKGAFRSFVAECEALRNI-RHRN 590
+G+G+FG V +G D+ + VAVK++ + + V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKLSLI 640
+I ++ C+ G + ++ EY G+L ++L ++V +++
Sbjct: 103 IINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 641 QRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLD 699
++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +++D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNID 211
Query: 700 TSSKTPSSSIGIKGTVGYVAPGKFF 724
KT + + +K ++AP F
Sbjct: 212 XXKKTTNGRLPVK----WMAPEALF 232
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 113
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFLSMD-----LKKFMDASALTGIPLPLIKSYLFQ 114
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 24/173 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK-QKGAFR-SFVAECEALRNIRHR 589
S++ IGQG+FG V+K + VA+K + ++ +K F + + E + L+ ++H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 590 NLIKIITICSST-----DFKGVDFKALVFEYMGN---GSLEDWLHQSNDQVEVCKLSLIQ 641
N++ +I IC + KG + LVF++ + G L + L K +L +
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIY--LVFDFCEHDLAGLLSNVL---------VKFTLSE 126
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
+ + + + Y+H + ++H D+K +NVL+ D V + DFGLA+ S
Sbjct: 127 IKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ + L+ ++ S + L LI+ +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFL-HQDLKTFMDAS--ALTGIPLPLIK--SYLFQ 114
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 110
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 112
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLSMD-----LKKFMDASALTGIPLPLIKSYLFQ 112
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 112
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 112
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 110
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 110
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 546 GSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605
G ++KG ++++V V + R F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---P 80
Query: 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMV 665
L+ +M GSL + LH+ + V + Q + A+D+A + +L H +P +
Sbjct: 81 APHPTLITHWMPYGSLYNVLHEGTNFV----VDQSQAVKFALDMARGMAFL-HTLEPLIP 135
Query: 666 HGDLKPSNVLLDHDMVAHVG 685
L +V++D DM A +
Sbjct: 136 RHALNSRSVMIDEDMTARIS 155
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 110
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 66 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 115
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 112
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHR 589
++ IG+G++G+V+K E IVA+K + L +G S + E L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 590 NLIKIITICSSTDFKGVDFK-ALVFEYMGNGSLEDWLHQSNDQV--EVCKLSLIQRLNIA 646
N++++ + S D K LVFE+ + L+ + N + E+ K L Q L
Sbjct: 62 NIVRLHDVLHS------DKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL--- 111
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + H ++H DLKP N+L++ + + +FGLA+
Sbjct: 112 ----KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Query: 517 KQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFR 574
KQ+ V S++ IGQG+FG V+K + VA+K + ++ ++G
Sbjct: 4 KQYDSVE-CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 575 SFVAECEALRNIRHRNLIKIITICSST-----DFKGVDFKALVFEYMGN---GSLEDWLH 626
+ + E + L+ ++H N++ +I IC + KG + LVF++ + G L + L
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY--LVFDFCEHDLAGLLSNVL- 119
Query: 627 QSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686
K +L + + + + + Y+H + ++H D+K +NVL+ D V + D
Sbjct: 120 --------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 168
Query: 687 FGLAKFLS 694
FGLA+ S
Sbjct: 169 FGLARAFS 176
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 114
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 115 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKN 163
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + DT+S S
Sbjct: 164 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQ 216
Query: 709 IGIKGTVGYVAP 720
+ GTV Y+ P
Sbjct: 217 V---GTVNYMPP 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 507 HNSADTSPMEKQFPMVSYAELSKA-----------TSEFSSSNMIGQGSFGSVYKGILGE 555
++ + SP+ ++ ++ Y E +K +F +IG+G+FG V L
Sbjct: 38 YDECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKN 97
Query: 556 DEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEY 615
+ + A+K++N K + R+ A R++ K IT F+ + LV +Y
Sbjct: 98 ADKVFAMKILN-KWEMLKRAETACFREERDVLVNGDSKWITTLHYA-FQDDNNLYLVMDY 155
Query: 616 MGNGSLEDWLHQSNDQV--EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSN 673
G L L + D++ E+ + L + + IAID + Y VH D+KP N
Sbjct: 156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMV-IAIDSVHQLHY---------VHRDIKPDN 205
Query: 674 VLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+L+D + + DFG L T SS+ + GT Y++P
Sbjct: 206 ILMDMNGHIRLADFGSCLKL------MEDGTVQSSVAV-GTPDYISP 245
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRHRNLIK---- 593
IG GS+G K D I+ K ++ + + V+E LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
II ++T + +V EY G L + + + + + L + + A+
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFV--LRVMTQLTLAL 124
Query: 654 EYLHHHCQ--PPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
+ H ++H DLKP+NV LD +GDFGLA+ L+ H + +KT
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSFAKT------F 176
Query: 712 KGTVGYVAP 720
GT Y++P
Sbjct: 177 VGTPYYMSP 185
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEHVDQD-----LKKFMDASALTGIPLPLIKSYLFQ 114
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 114
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 115 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKN 163
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + DT+S S
Sbjct: 164 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQ 216
Query: 709 IGIKGTVGYVAP 720
+ GTV Y+ P
Sbjct: 217 V---GTVNYMPP 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G+FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 100 HKNIINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDI--N 208
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAPEALF 232
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 26/194 (13%)
Query: 514 PMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLK 568
P+ Q E+S + F +G+ FG VYKG L GE VA+K + K
Sbjct: 10 PLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK 67
Query: 569 QKGAFRS-FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL-- 625
+G R F E ++H N++ ++ + + +++F Y +G L ++L
Sbjct: 68 AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL-----SMIFSYCSHGDLHEFLVM 122
Query: 626 --------HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 677
+D+ L +++ +A+ +EYL H +VH DL NVL+
Sbjct: 123 RSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVY 179
Query: 678 HDMVAHVGDFGLAK 691
+ + D GL +
Sbjct: 180 DKLNVKISDLGLFR 193
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 27/192 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI---NLKQKGAFRSFVAECEALRNIRH 588
+F +G+G FG+VY + IVA+KV+ ++++G E E ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++++ F L+ EY G L L +S C + I +
Sbjct: 83 PNILRLYNY-----FYDRRRIYLILEYAPRGELYKELQKS------CTFDEQRTATIMEE 131
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+A A+ Y H ++H D+KP N+LL + DFG S H KT
Sbjct: 132 LADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKT---- 180
Query: 709 IGIKGTVGYVAP 720
+ GT+ Y+ P
Sbjct: 181 --MCGTLDYLPP 190
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHR 589
+ +++G G+F V IL ED + +VA+K I + +G S E L I+H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++ + I ++ L+ + + G L D + + E LI V
Sbjct: 77 NIVALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQV 125
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVGDFGLAKFLSSHHLDTSSKTPS 706
A++YLH +VH DLKP N+L LD D + DFGL+K + P
Sbjct: 126 LDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPG 172
Query: 707 SSIGIK-GTVGYVAP 720
S + GT GYVAP
Sbjct: 173 SVLSTACGTPGYVAP 187
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G+FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 100 HKNIITLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAPEALF 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA----ECEALRNIR 587
+E + +IG G FG VY+ DE VAVK + E + ++
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAI 647
H N+I + +C K + LV E+ G L L ++ +N A+
Sbjct: 65 HPNIIALRGVC----LKEPNL-CLVMEFARGGPLNRVLSGKRIPPDIL-------VNWAV 112
Query: 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM--------VAHVGDFGLAKFLSSHHLD 699
+A + YLH P++H DLK SN+L+ + + + DFGLA+ H
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHR-- 168
Query: 700 TSSKTPSSSIGIKGTVGYVAP 720
++ + G ++AP
Sbjct: 169 ------TTKMSAAGAYAWMAP 183
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 41/207 (19%)
Query: 523 SYAELSKATSEFSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINLKQKGA-FRSFVA 578
Y EL K + IG G F V + GE +VA+K+++ G+
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGE---MVAIKIMDKNTLGSDLPRIKT 57
Query: 579 ECEALRNIRHRNLIKIITICSSTD--FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK 636
E EAL+N+RH+++ ++ + + + F +V EY G L D++ S D++ +
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIF-------MVLEYCPGGELFDYI-ISQDRLSEEE 109
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA---KFL 693
++ R + SA+ Y+H H DLKP N+L D + DFGL K
Sbjct: 110 TRVVFR-----QIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161
Query: 694 SSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+HL T G++ Y AP
Sbjct: 162 KDYHLQTCC----------GSLAYAAP 178
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRHRNLIK---- 593
IG GS+G K D I+ K ++ + + V+E LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
II ++T + +V EY G L + + + + + L + + A+
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFV--LRVMTQLTLAL 124
Query: 654 EYLHHHCQ--PPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
+ H ++H DLKP+NV LD +GDFGLA+ L+ DT S +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH---DT-----SFAKAF 176
Query: 712 KGTVGYVAP 720
GT Y++P
Sbjct: 177 VGTPYYMSP 185
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G+FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 100 HKNIINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAPEALF 232
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRS 575
P AE + +F +++G G+F V IL ED + +VA+K I + +G S
Sbjct: 8 PRWKQAEDIRDIYDFR--DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC 635
E L I+H N++ + I S L+ + + G L D + + E
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHL-----YLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVGDFGLAKF 692
LI V A++YLH +VH DLKP N+L LD D + DFGL+K
Sbjct: 118 ASRLI------FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 693 LSSHHLDTSSKTPSSSIGIK-GTVGYVAP 720
+ P S + GT GYVAP
Sbjct: 169 ----------EDPGSVLSTACGTPGYVAP 187
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G+FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 100 HKNIIHLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ +++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN- 209
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
+D KT + + +K ++AP F
Sbjct: 210 -IDYYKKTTNGRLPVK----WMAPEALF 232
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 540 IGQGSFGSVYKG-ILGEDE------MIVAVKVI-NLKQKGAFRSFVAECEALRNI-RHRN 590
+G+G FG V +G D+ + VAVK++ + + V+E E ++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKLSLI 640
+I ++ C+ G + ++ EY G+L ++L ++V +++
Sbjct: 149 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 641 QRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLD 699
++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +++D
Sbjct: 204 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNID 257
Query: 700 TSSKTPSSSIGIKGTVGYVAPGKFF 724
KT + + +K ++AP F
Sbjct: 258 YYKKTTNGRLPVK----WMAPEALF 278
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 25/226 (11%)
Query: 9 IGSLFKLQALALAGNYLTGKLPDF--IGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
+ +L K +L L N+ L D + N + L + + + + P + L +L L
Sbjct: 128 LANLTKXYSLNLGANH---NLSDLSPLSNXTGLNYLTVTESKVKDVTP--IANLTDLYSL 182
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
++ N+ + P + +++SL YF N+ + P V N L L IG N L
Sbjct: 183 SLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP---VANXTRLNSLKIGNNKITDLS 237
Query: 127 PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN 186
P L+N S L L++ NQ D +++K L +L L +G+ N + ++ L N
Sbjct: 238 P--LANLSQLTWLEIGTNQIS-----DINAVKDLTKLKX----LNVGS-NQISDISVLNN 285
Query: 187 CSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLG 232
S L L L++NQ G E I L++ +FL N I+ PL
Sbjct: 286 LSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFL-SQNHITDIRPLA 330
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 36 LSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSN 95
L+ L+ +++ GN + P L L L L + NK + ++ N+++L YL +
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNED 120
Query: 96 RFSGSLPFDIVVNLPNLKELGIGAN-NFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDF 154
S P NL L +GAN N L P LSN + L L ++ ++ K I
Sbjct: 121 NISDISPL---ANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTESKVKDVTPI-- 173
Query: 155 SSLKILWRLNLEQNNLG--------------IGAANDLGFVTFLTNCSSLKVLSLSDNQF 200
++L L+ L+L N + N + +T + N + L L + +N+
Sbjct: 174 ANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANXTRLNSLKIGNNKI 233
Query: 201 GGELPHSIANLSSTMIVFLIGGNQISG-----------TIPLG---------IRNLVNLI 240
P +ANLS + IG NQIS + +G + NL L
Sbjct: 234 TDLSP--LANLSQ-LTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVLNNLSQLN 290
Query: 241 ALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGS 294
+L + NQL +VIG L NL L L +N + P L +L+K D +
Sbjct: 291 SLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP--LASLSKXDSADFAN 342
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRS 575
P AE + +F +++G G+F V IL ED + +VA+K I + +G S
Sbjct: 8 PRWKQAEDIRDIYDFR--DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC 635
E L I+H N++ + I S L+ + + G L D + + E
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHL-----YLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVGDFGLAKF 692
LI V A++YLH +VH DLKP N+L LD D + DFGL+K
Sbjct: 118 ASRLI------FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 693 LSSHHLDTSSKTPSSSIGIK-GTVGYVAP 720
+ P S + GT GYVAP
Sbjct: 169 ----------EDPGSVLSTACGTPGYVAP 187
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKII 595
IG+G+F V + IL E VAVK+I+ Q + + E + + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
+ + LV EY G + D+L E + ++ + SA++Y
Sbjct: 80 EVIETEKTL-----YLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ------IVSAVQY 128
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA-KFLSSHHLDTSSKTP 705
H Q +VH DLK N+LLD D + DFG + +F + LD P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRHRNLIK---- 593
IG GS+G K D I+ K ++ + + V+E LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
II ++T + +V EY G L + + + + + L + + A+
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFV--LRVMTQLTLAL 124
Query: 654 EYLHHHCQ--PPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
+ H ++H DLKP+NV LD +GDFGLA+ L +H D + +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKE-------F 176
Query: 712 KGTVGYVAP 720
GT Y++P
Sbjct: 177 VGTPYYMSP 185
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGE---DEMIVAVKVIN----LKQKGAFRSFVAECEA 582
A + + ++G+G FG VY+G+ +++ VAVK L K F++E
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK---EKFMSEAVI 78
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++N+ H +++K+I I + ++ E G L +L ++ + ++V L L
Sbjct: 79 MKNLDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-- 130
Query: 643 LNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTS 701
++ + A+ YL +C VH D+ N+L+ +GDFGL++++ +
Sbjct: 131 ---SLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 183
Query: 702 SKT 704
S T
Sbjct: 184 SVT 186
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 32 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 89 HKNIINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--N 197
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 198 NIDYYKKTTNGRLPVK----WMAPEALF 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 31/257 (12%)
Query: 466 PSRGSRKLKI-TLLKVLIPVAVSCWILFSCLTIVYARRRRSAHNSADTSPMEKQFPMVSY 524
P R L + TLL VL+ + C ++ RR + A+ K F +
Sbjct: 34 PWRNESALSVETLLDVLVCLYTEC---------SHSALRRDKY-VAEFLEWAKPFTQLV- 82
Query: 525 AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALR 584
E+ +F +IG+G+FG V + E I A+K++N K + R+ A R
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREER 141
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRL 643
++ + IT F+ + LV +Y G L L + D++ E I +
Sbjct: 142 DVLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 200
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+AID +I LH+ VH D+KP NVLLD + + DFG ++
Sbjct: 201 VLAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN------DDG 245
Query: 704 TPSSSIGIKGTVGYVAP 720
T SS+ + GT Y++P
Sbjct: 246 TVQSSVAV-GTPDYISP 261
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 31/257 (12%)
Query: 466 PSRGSRKLKI-TLLKVLIPVAVSCWILFSCLTIVYARRRRSAHNSADTSPMEKQFPMVSY 524
P R L + TLL VL+ + C ++ RR + A+ K F +
Sbjct: 18 PWRNESALSVETLLDVLVCLYTEC---------SHSALRRDKY-VAEFLEWAKPFTQLV- 66
Query: 525 AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALR 584
E+ +F +IG+G+FG V + E I A+K++N K + R+ A R
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREER 125
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRL 643
++ + IT F+ + LV +Y G L L + D++ E I +
Sbjct: 126 DVLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 184
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+AID +I LH+ VH D+KP NVLLD + + DFG ++
Sbjct: 185 VLAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN------DDG 229
Query: 704 TPSSSIGIKGTVGYVAP 720
T SS+ + GT Y++P
Sbjct: 230 TVQSSVAV-GTPDYISP 245
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ + L+ ++ S + L LI+ +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEHV-HQDLKTFMDAS--ALTGIPLPLIK--SYLFQ 110
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGE---DEMIVAVKVI----NLKQKGAFRSFVAECEA 582
A + + ++G+G FG VY+G+ +++ VAVK L K F++E
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK---EKFMSEAVI 66
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++N+ H +++K+I I + ++ E G L +L ++ + ++V L L
Sbjct: 67 MKNLDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-- 118
Query: 643 LNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTS 701
++ + A+ YL +C VH D+ N+L+ +GDFGL++++ +
Sbjct: 119 ---SLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
Query: 702 SKT 704
S T
Sbjct: 172 SVT 174
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 30 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 87 HKNIINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDI--N 195
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 196 NIDYYKKTTNGRLPVK----WMAPEALF 219
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS------FVAECEALR 584
+ + +G G++G V +L +D++ A + I + +K + + + E L+
Sbjct: 20 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H N++K+ F+ LV E G L D + + K S +
Sbjct: 77 QLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEI------ILRQKFSEVDAAV 125
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTS 701
I V S YLH H +VH DLKP N+LL+ D + + DFGL S H +
Sbjct: 126 IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGL-----SAHFEVG 177
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 178 GKMKERL----GTAYYIAP 192
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 532 SEFSSSNMIGQGSFGSVYKGIL---GEDEMI-VAVKVI--NLKQKGAFRSFVAECEALRN 585
+E ++G G+FG+VYKGI GE+ I VA+KV+ N K A + + E +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK-ANKEILDEAYVMAG 75
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
+ + +++ IC ++ + LV + M G L D + ++ ++ L LN
Sbjct: 76 VGSPYVSRLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDL-----LNW 124
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL----SSHHLD 699
+ +A + YL +VH DL NVL+ + DFGLA+ L + +H D
Sbjct: 125 CMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD 179
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 35 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 92 HKNIINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--N 200
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 201 NIDYYKKTTNGRLPVK----WMAPEALF 224
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 49/216 (22%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---------------------- 569
++++ + IG+GS+G V D A+KV++ K+
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 570 ----KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL 625
+G E L+ + H N++K++ + D D +VFE + G +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL---DDPNEDHLYMVFELVNQGPVM--- 126
Query: 626 HQSNDQVEVCK-LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684
+V K LS Q D+ IEYLH+ ++H D+KPSN+L+ D +
Sbjct: 127 -----EVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKI 178
Query: 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFG+ S+ S S+++ GT ++AP
Sbjct: 179 ADFGV-----SNEFKGSDALLSNTV---GTPAFMAP 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 540 IGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIIT 596
+G+G +G V++G+ GE VAVK+ + + + +S+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGLWHGES---VAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIA 69
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
++ L+ Y +GSL D+L + + + L +A+ A + +L
Sbjct: 70 SDMTSRNSSTQL-WLITHYHEHGSLYDFLQRQTLEPHLA-------LRLAVSAACGLAHL 121
Query: 657 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS--SHHLDTSSKTPSSSI 709
H +P + H D K NVL+ ++ + D GLA S S +LD +
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV--- 178
Query: 710 GIKGTVGYVAP 720
GT Y+AP
Sbjct: 179 ---GTKRYMAP 186
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 540 IGQGSFGSVYKGI--LGEDEMIVAVKVINL-KQKGAFRSFVAECEALRNIRHRNLIKIIT 596
+G G+FGSV +G+ + + ++ VA+KV+ +K + E + + + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+C + LV E G G L +L +++ V ++ + V+ ++YL
Sbjct: 404 VCQAEAL------MLVMEMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYL 452
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
+ VH +L NVLL + A + DFGL+K L + D S T S+ K +
Sbjct: 453 E---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA---DDSYYTARSA--GKWPLK 504
Query: 717 YVAP 720
+ AP
Sbjct: 505 WYAP 508
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGE---DEMIVAVKVIN----LKQKGAFRSFVAECEA 582
A + + ++G+G FG VY+G+ +++ VAVK L K F++E
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK---EKFMSEAVI 62
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR 642
++N+ H +++K+I I + ++ E G L +L ++ + ++V L L
Sbjct: 63 MKNLDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-- 114
Query: 643 LNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTS 701
++ + A+ YL +C VH D+ N+L+ +GDFGL++++ +
Sbjct: 115 ---SLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 167
Query: 702 SKT 704
S T
Sbjct: 168 SVT 170
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + LV MG L H SND + C L Q +
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI--CYF-LYQ-------I 153
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 154 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 201
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 540 IGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLIK 593
+G+ FG VYKG L GE VA+K + K +G R F E ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWL----------HQSNDQVEVCKLSLIQRL 643
++ + + +++F Y +G L ++L +D+ L +
Sbjct: 77 LLGVVTKDQPL-----SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ +A+ +EYL H +VH DL NVL+ + + D GL +
Sbjct: 132 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 43/221 (19%)
Query: 514 PMEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN--- 566
PM ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 567 ---LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNG 619
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 62 QSIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGAD 114
Query: 620 SLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD 679
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 115 L--------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNED 163
Query: 680 MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 164 CELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 193
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITI 597
IG+G++G VYK E A+K I L+++ G + + E L+ ++H N++K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK--LSLIQRLNIAIDVASAIEY 655
+ LVFE++ ++VC+ L + + + + + I Y
Sbjct: 69 IHTKKRL-----VLVFEHLD--------QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKP N+L++ + + DFGLA+
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITI 597
IG+G++G VYK E A+K I L+++ G + + E L+ ++H N++K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK--LSLIQRLNIAIDVASAIEY 655
+ LVFE++ ++VC+ L + + + + + I Y
Sbjct: 69 IHTKKRL-----VLVFEHLD--------QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKP N+L++ + + DFGLA+
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITI 597
IG+G++G VYK E A+K I L+++ G + + E L+ ++H N++K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK--LSLIQRLNIAIDVASAIEY 655
+ LVFE++ ++VC+ L + + + + + I Y
Sbjct: 69 IHTKKRL-----VLVFEHLD--------QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKP N+L++ + + DFGLA+
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+ I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 534 FSSSNMIGQGSFGSVYKG---ILGEDEMIVAVKVINL--KQKGAFRSFVAECEALRNIRH 588
F IG+G++G VYK + GE +VA+ I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K++ + + + LVFE++ L + D + + L +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQ 110
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + + H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 114
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 115 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKN 163
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + DT+S S
Sbjct: 164 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQ 216
Query: 709 IGIKGTVGYVAP 720
+ G V Y+ P
Sbjct: 217 V---GAVNYMPP 225
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI- 586
S+ T+EF IG G FGSV+K + D I A+K + K V E ALR +
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 58
Query: 587 ------RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 59 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 114 K--DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI- 586
S+ T+EF IG G FGSV+K + D I A+K + K V E ALR +
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 587 ------RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 118 K--DLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI- 586
S+ T+EF IG G FGSV+K + D I A+K + K V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 587 ------RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 116 K--DLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS------FVAECEALR 584
+ + +G G++G V +L +D++ A + I + +K + + + E L+
Sbjct: 3 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 59
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H N++K+ F+ LV E G L D + + K S +
Sbjct: 60 QLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEI------ILRQKFSEVDAAV 108
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVGDFGLAKFLSSHHLDTS 701
I V S YLH H +VH DLKP N+LL+ D + + DFGL S H +
Sbjct: 109 IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGL-----SAHFEVG 160
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 161 GKMKERL----GTAYYIAP 175
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI- 586
S+ T+EF IG G FGSV+K + D I A+K + K V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 587 ------RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLI 640
+H ++++ + + D + EY GSL D + ++ + K + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQ-----NEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 116 K--DLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 7 KEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
K L KL+ L L N L L L+ + + N L L NL +L
Sbjct: 55 KAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL 114
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
+ N+ + PR +++ L Y L N SLP + L +LKEL + NN +
Sbjct: 115 RLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRL-YNNQLKRV 172
Query: 127 PD-SLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168
P+ + + L+ L L NNQ K F SL+ L L L++N
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 188 SSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGI-RNLVNLIALAVEV 246
+ K L L N+ LP + + + + + N++ T+P GI + L NL L V
Sbjct: 37 ADTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTD 94
Query: 247 NQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQ 298
N+L V +L NL L L +N L+ P +LTKL L LG N LQ
Sbjct: 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Query: 139 LDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDN 198
LDL +N+ S F L L L L N L A G L N L+ L ++DN
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA---GIFKELKN---LETLWVTDN 95
Query: 199 QFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIG 258
+ LP + + + + NQ+ P +L L L++ N+L V
Sbjct: 96 KLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD 154
Query: 259 ELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQ 298
+L +L+ L LY N L+ LT+L L L +N L+
Sbjct: 155 KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 74/193 (38%), Gaps = 8/193 (4%)
Query: 65 QLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFG 124
+L++ NK + ++ ++ L YL N+ +LP I L NL+ L + N
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA 99
Query: 125 LIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFL 184
L NL L L NQ K F SL L L+L N L G L
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPK---GVFDKL 156
Query: 185 TNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAV 244
T SLK L L +NQ +P + + + + NQ+ +L L L +
Sbjct: 157 T---SLKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212
Query: 245 EVNQLHGTIPDVI 257
+ N T +I
Sbjct: 213 QENPWDCTCNGII 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFV-AECEALRNIR-HRNLIKI 594
+++G+G+ V I AVK+I KQ G RS V E E L + HRN+++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE- 75
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
F+ D LVFE M GS+ +H+ E+ ++Q DVASA++
Sbjct: 76 ----LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASALD 125
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVG--DFGLAKFLSSHHLDTSSKTPSSSIGI 711
+LH+ + H DLKP N+L +H + V+ V DFGL + + D S + +
Sbjct: 126 FLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNG-DCSPISTPELLTP 181
Query: 712 KGTVGYVAP 720
G+ Y+AP
Sbjct: 182 CGSAEYMAP 190
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G+FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ EY G+L ++L ++V ++
Sbjct: 100 HKNIINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D T + + +K ++AP F
Sbjct: 209 NIDYYKNTTNGRLPVK----WMAPEALF 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 28/188 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIIT 596
IG+GSFG V + + + A+K +N + ++ R+ E + ++ + H L+ +
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQS-NDQVEVCKLSLIQRLNIAIDVASAIEY 655
F+ + +V + + G L L Q+ + + E KL + + + A++Y
Sbjct: 83 -----SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE-------LVMALDY 130
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + ++H D+KP N+LLD H+ DF +A L T+ + GT
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT---------MAGTK 178
Query: 716 GYVAPGKF 723
Y+AP F
Sbjct: 179 PYMAPEMF 186
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G+FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ Y G+L ++L ++V ++
Sbjct: 100 HKNIINLLGACTQD---GPLY--VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAPEALF 232
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 21/166 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
+++ +IG GSFG V++ L E + + KV+ Q F++ E + +R ++H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL---QDKRFKN--RELQIMRIVKHPNVVD 96
Query: 594 IIT-ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----VEVCKLSLIQRLNIAID 648
+ S+ D K F LV EY+ H + + + + KL + Q L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR---- 152
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGLAKFL 693
++ Y+H + H D+KP N+LLD V + DFG AK L
Sbjct: 153 ---SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Query: 200 FGGELPHSIANLSS-TMIVFLI-GGNQISGTIPLGI-RNLVNLIALAVEVNQLHGTIPD- 255
GG H I+ L T + +LI GNQ+ ++P G+ L NL L + NQL ++PD
Sbjct: 70 LGGNKLHDISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDG 127
Query: 256 VIGELKNLQLLGLYKNFLQGSIPSGL-GNLTKLAKLDLGSNSLQG 299
V +L NL L LY N LQ S+P G+ LT L +LDL +N LQ
Sbjct: 128 VFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQS 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 9 IGSLFKLQALALAGNYLTGKLPDF--IGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I L ++ LAL GN KL D + L+ L + + GN L L NL +L
Sbjct: 59 IQYLPNVRYLALGGN----KLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
+ EN+ + +++L Y YL N+ SLP + L NL L + N L
Sbjct: 115 VLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLP 173
Query: 127 PDSLSNASNLELLDLSNNQFKG---KVSIDFSSLKILWRLN 164
+ L+ L L++NQ K V +SL +W LN
Sbjct: 174 EGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLN 214
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
L N+ L + NK + + ++ +++L Y LT N+ SLP + L NLKEL +
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 120 NNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLG 179
N L +NL L L +NQ + F L L RL+L+ N L G
Sbjct: 119 NQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPE---G 175
Query: 180 FVTFLTNCSSLKVLSLSDNQF 200
LT LK LSL+DNQ
Sbjct: 176 VFDKLT---QLKQLSLNDNQL 193
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 170 LGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTI 229
L +G N L ++ L ++L L L+ NQ LP+ + + + + ++ NQ+ ++
Sbjct: 68 LALGG-NKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQ-SL 124
Query: 230 PLGI-RNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGL-GNLTKL 287
P G+ L NL L + NQL V +L NL L L N LQ S+P G+ LT+L
Sbjct: 125 PDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQL 183
Query: 288 AKLDLGSNSLQG 299
+L L N L+
Sbjct: 184 KQLSLNDNQLKS 195
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 37/189 (19%)
Query: 109 LPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168
LPN++ L +G N + +L +NL L L+ NQ + +
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPN----------------- 102
Query: 169 NLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGT 228
G LTN LK L L +NQ LP + + + + + NQ+ +
Sbjct: 103 ----------GVFDKLTN---LKELVLVENQLQS-LPDGVFDKLTNLTYLYLYHNQLQ-S 147
Query: 229 IPLGI-RNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGL-GNLTK 286
+P G+ L NL L ++ NQL V +L L+ L L N L+ S+P G+ LT
Sbjct: 148 LPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFDRLTS 206
Query: 287 LAKLDLGSN 295
L + L +N
Sbjct: 207 LTHIWLLNN 215
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
++F ++G+G+FG V IL ++ A+K++ + K V E L+N
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 62 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 110
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
++F ++G+G+FG V IL ++ A+K++ + K V E L+N
Sbjct: 8 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 65 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 113
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 114 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 509 SADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGIL-GEDEMIVAVKVINL 567
SA + P + + E + +IG+G FG VY G GE VA+++I++
Sbjct: 10 SARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE----VAIRLIDI 65
Query: 568 KQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWL 625
++ + ++F E A R RH N++ + C S A++ +L +
Sbjct: 66 ERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-----PHLAIITSLCKGRTLYSVV 120
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
+ ++V K IA ++ + YLH ++H DLK NV D+ V +
Sbjct: 121 RDAKIVLDVNKTR-----QIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-IT 171
Query: 686 DFGL 689
DFGL
Sbjct: 172 DFGL 175
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
++F ++G+G+FG V IL ++ A+K++ + K V E L+N
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 62 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 110
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
++F ++G+G+FG V IL ++ A+K++ + K V E L+N
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 62 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 110
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
++F ++G+G+FG V IL ++ A+K++ + K V E L+N
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 62 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 110
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 540 IGQGSFGSVYKGILGE-------DEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
+GQG+F ++KG+ E E V +KV++ + SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+C D LV E++ GSL+ +L ++ + C ++++ +L +A +A+A
Sbjct: 76 LNYGVCVCG-----DENILVQEFVKFGSLDTYLKKNKN----C-INILWKLEVAKQLAAA 125
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLL 676
+ +L + ++HG++ N+LL
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL 146
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 40/198 (20%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN- 590
+F +G GSFG V+ + A+KV LK++ R L+ + H N
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKV--LKKEIVVR--------LKQVEHTND 55
Query: 591 ---LIKIIT----ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSND-QVEVCKLSLIQR 642
++ I+T I F+ ++ +Y+ G L L +S V K
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF----- 110
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
A +V A+EYLH +++ DLKP N+LLD + + DFG AK++
Sbjct: 111 --YAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV--------- 156
Query: 703 KTPSSSIGIKGTVGYVAP 720
P + + GT Y+AP
Sbjct: 157 --PDVTYXLCGTPDYIAP 172
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 35/205 (17%)
Query: 525 AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEA 582
A ++ T ++ +G+G+F V + + A K+IN K+ A + E
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 583 LRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSL-EDWL---HQSNDQVEVCKLS 638
R ++H N++++ S F LVF+ + G L ED + + S C
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASHCIHQ 138
Query: 639 LIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVGDFGLAKFLSS 695
+++ +N ++H H +VH DLKP N+LL + DFGLA +
Sbjct: 139 ILESVN----------HIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
Query: 696 HHLDTSSKTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 186 EQ--------QAWFGFAGTPGYLSP 202
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
+EF ++G+G+FG V IL +++ A+K++ + K + E L+N
Sbjct: 8 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 65 SRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFY 113
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 114 GAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 540 IGQGSFGSVYKGILGE----------DEMIVAVKVI-NLKQKGAFRSFVAECEALRNI-R 587
+G+G+FG V ++ E + + VAVK++ + + V+E E ++ I +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN----------DQVEVCKL 637
H+N+I ++ C+ G + ++ Y G+L ++L ++V ++
Sbjct: 100 HKNIINLLGACTQD---GPLY--VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 638 SLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
+ ++ +A +EYL C +H DL NVL+ + V + DFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAPGKFF 724
++D KT + + +K ++AP F
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAPEALF 232
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 20/144 (13%)
Query: 540 IGQGSFGSVYKGILGE-------DEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
+GQG+F ++KG+ E E V +KV++ + SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+C F G D LV E++ GSL+ +L ++ + C ++++ +L +A +A A
Sbjct: 76 LNYGVC----FCG-DENILVQEFVKFGSLDTYLKKNKN----C-INILWKLEVAKQLAWA 125
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLL 676
+ +L + ++HG++ N+LL
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL 146
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
+EF ++G+G+FG V IL +++ A+K++ + K + E L+N
Sbjct: 9 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 66 SRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFY 114
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 115 GAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
+EF ++G+G+FG V IL +++ A+K++ + K + E L+N
Sbjct: 10 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 67 SRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFY 115
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 116 GAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA----ECEAL 583
+K ++ +++G+GS+G V + + E AVK++ K+ + A E + L
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
R +RH+N+I+++ + + + + + +V EY G + + D V + + Q
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCG-----MQEMLDSVPEKRFPVCQAH 112
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
+ +EYLH +VH D+KP N+LL + G+A+ L D + +
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 704 TPSSS 708
T S
Sbjct: 170 TSQGS 174
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
++F ++G+G+FG V IL ++ A+K++ + K V E L+N
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 62 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 110
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVY--KGILGED-EMIVAVKVIN---LKQKGAFRSFVAECEALRN 585
S+F ++GQGSFG V+ K I G D + A+KV+ LK + R+ + E + L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 83
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
+ H ++K+ F+ L+ +++ G L L + EV + +
Sbjct: 84 VNHPFIVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 133
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
A ++A A+++LH +++ DLKP N+LLD + + DFGL+K +D K
Sbjct: 134 A-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAY 185
Query: 706 SSSIGIKGTVGYVAP 720
S GTV Y+AP
Sbjct: 186 SFC----GTVEYMAP 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVY--KGILGED-EMIVAVKVIN---LKQKGAFRSFVAECEALRN 585
S+F ++GQGSFG V+ K I G D + A+KV+ LK + R+ + E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
+ H ++K+ F+ L+ +++ G L L + EV + +
Sbjct: 83 VNHPFIVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 132
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
A ++A A+++LH +++ DLKP N+LLD + + DFGL+K +D K
Sbjct: 133 A-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAY 184
Query: 706 SSSIGIKGTVGYVAP 720
S GTV Y+AP
Sbjct: 185 SFC----GTVEYMAP 195
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 43/222 (19%)
Query: 513 SPMEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-- 566
S M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 78
Query: 567 ----LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGN 618
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 79 FQSIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA 131
Query: 619 GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++
Sbjct: 132 --------DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 180
Query: 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
D + DFGLA+ T G T Y AP
Sbjct: 181 DCELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 211
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----AFRSFVAECEALRNIRH 588
+S IG G V++ +L E + I A+K +NL++ ++R+ +A L+ +H
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 86
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
+ KII + D++ D + GN L WL + + +R + +
Sbjct: 87 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKN 135
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ A+ +H H +VH DLKP+N L+ M+ + DFG+A + D S
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DXXXVVKDSQ 188
Query: 709 IGIKGTVGYVAP 720
+ GTV Y+ P
Sbjct: 189 V---GTVNYMPP 197
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
++F ++G+G+FG V IL ++ A+K++ + K V E L+N
Sbjct: 10 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V + +
Sbjct: 67 TRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----Y 115
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 116 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 43/222 (19%)
Query: 513 SPMEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-- 566
S M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 18 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 77
Query: 567 ----LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGN 618
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 78 FQSIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA 130
Query: 619 GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++
Sbjct: 131 --------DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 179
Query: 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
D + DFGLA+ T G T Y AP
Sbjct: 180 DCELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
+EF ++G+G+FG V IL +++ A+K++ + K + E L+N
Sbjct: 148 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 205 SRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFY 253
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 254 GAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI---VAVKVINLK---QKGAFRSFVAECEALRN 585
+EF ++G+G+FG V IL +++ A+K++ + K + E L+N
Sbjct: 151 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
RH L + F+ D V EY G L + H S ++V S +
Sbjct: 208 SRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFY 256
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 257 GAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDX 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINL-----KQKGAFRSFVAECEALRNIRHRNLIKI 594
IG+GSFG ED +K IN+ K++ R VA L N++H N+++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA---VLANMKHPNIVQY 88
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
F+ +V +Y G D + N Q V Q L+ + + A++
Sbjct: 89 -----RESFEENGSLYIVMDYCEGG---DLFKRINAQKGVL-FQEDQILDWFVQICLALK 139
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
++H ++H D+K N+ L D +GDFG+A+ L+S
Sbjct: 140 HVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGXVATRWYRAP 191
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVY--KGILGED-EMIVAVKVIN---LKQKGAFRSFVAECEALRN 585
S+F ++GQGSFG V+ K I G D + A+KV+ LK + R+ + E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
+ H ++K+ F+ L+ +++ G L L + EV + +
Sbjct: 83 VNHPFIVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 132
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
A ++A A+++LH +++ DLKP N+LLD + + DFGL+K +D K
Sbjct: 133 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAY 184
Query: 706 SSSIGIKGTVGYVAP 720
S GTV Y+AP
Sbjct: 185 SFC----GTVEYMAP 195
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 72 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 124
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 125 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDX 173
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 174 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 202
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 39/215 (18%)
Query: 527 LSKATSEFSSSNMI-----GQGSFGSVYKGI---LGEDEMIVAVKVINLKQKGA---FRS 575
L EF N++ G+G FG V K L V V LK+ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN------ 629
++E L+ + H ++IK+ CS L+ EY GSL +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 630 ------------DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 677
D + L++ ++ A ++ ++YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+ DFGL++ + D+ K I +K
Sbjct: 185 EGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVK 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 501 RRRRSAHNSADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIV 560
++R+ H+S T+ M + P + + + ++IG GS+G V + ++ +V
Sbjct: 28 QQRKQHHSSKPTASMPR--PHSDW----QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVV 81
Query: 561 AVKVI--NLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGN 618
A+K I + + + E L + H +++K++ I D + D +V E + +
Sbjct: 82 AIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IAD 140
Query: 619 GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678
+ E+ +L+ L + + +Y+H ++H DLKP+N L++
Sbjct: 141 SDFKKLFRTPVYLTELHIKTLLYNLLVGV------KYVH---SAGILHRDLKPANCLVNQ 191
Query: 679 DMVAHVGDFGLAK 691
D V DFGLA+
Sbjct: 192 DCSVKVCDFGLAR 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLI 592
F ++G G++G VYKG + + A+KV+++ E L+ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 593 KIITICSSTDFKGVDFK-ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
+ G+D + LV E+ G GS+ D + N + K I I ++
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWI--AYICREILR 140
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
+ +LH H ++H D+K NVLL + + DFG+ S LD + ++ I
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV-----SAQLDRTVGRRNTFI-- 190
Query: 712 KGTVGYVAP 720
GT ++AP
Sbjct: 191 -GTPYWMAP 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 39/215 (18%)
Query: 527 LSKATSEFSSSNMI-----GQGSFGSVYKGI---LGEDEMIVAVKVINLKQKGA---FRS 575
L EF N++ G+G FG V K L V V LK+ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN------ 629
++E L+ + H ++IK+ CS L+ EY GSL +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 630 ------------DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 677
D + L++ ++ A ++ ++YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+ DFGL++ + D+ K I +K
Sbjct: 185 EGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVK 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 6 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 66 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 118
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 119 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 167
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 168 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 196
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 133
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT 181
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 63 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 115
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 116 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 164
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 165 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 193
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 137
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 67 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 119
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 120 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 168
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 169 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 197
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 24 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 84 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 136
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 137 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 185
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 186 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 214
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ 72
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 73 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 125
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 126 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 174
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 175 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 39/215 (18%)
Query: 527 LSKATSEFSSSNMI-----GQGSFGSVYKGI---LGEDEMIVAVKVINLKQKGA---FRS 575
L EF N++ G+G FG V K L V V LK+ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 576 FVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN------ 629
++E L+ + H ++IK+ CS L+ EY GSL +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 630 ------------DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 677
D + L++ ++ A ++ ++YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIK 712
+ DFGL++ + D+ K I +K
Sbjct: 185 EGRKMKISDFGLSR--DVYEEDSYVKRSQGRIPVK 217
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 133
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 73 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 125
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 126 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 174
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 175 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 203
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 73 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 125
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 126 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 174
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 175 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 203
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 72 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 124
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 125 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 173
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 174 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 202
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 133
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 135
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 136 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI--CYF-LYQ-------I 137
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 67 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 119
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 120 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDS 168
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 169 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 197
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 137
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVA 578
P + ++ +++ + IG+G++G V +++ VA+K I+ + + + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCK 636
E + L RH N+I I I + + + +V + M L H SND + C
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CY 148
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
L Q + ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 149 F-LYQ-------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 197
Query: 697 HLDT 700
H T
Sbjct: 198 HDHT 201
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 63 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 115
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 116 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDS 164
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 165 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 193
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 133
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
K+ P EL+K E + + + +G G++GSV + + +AVK ++
Sbjct: 32 KERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSI 91
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICS-STDFKGVDFKALVFEYMGNGSLEDWL 625
+ K +R E L++++H N+I ++ + + +T + + LV MG
Sbjct: 92 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADL----- 142
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 143 ---NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 196
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 197 DFGLAR-----------HTDDEMTGYVATRWYRAP 220
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVA 578
P + ++ +++ + IG+G++G V +++ VA+K I+ + + + +
Sbjct: 19 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 78
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCK 636
E + L RH N+I I I + + + +V + M L H SND + C
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CY 136
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
L Q + ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 137 F-LYQ-------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 185
Query: 697 HLDT 700
H T
Sbjct: 186 HDHT 189
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVA 578
P + ++ +++ + IG+G++G V +++ VA+K I+ + + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCK 636
E + L RH N+I I I + + + +V + M L H SND + C
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CY 128
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
L Q + ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 129 F-LYQ-------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
Query: 697 HLDT 700
H T
Sbjct: 178 HDHT 181
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFV-AECEALRNIR-HRNLIKI 594
+++G+G+ V I AVK+I KQ G RS V E E L + HRN+++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE- 75
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
F+ D LVFE M GS+ +H+ E+ ++Q DVASA++
Sbjct: 76 ----LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASALD 125
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDH 678
+LH+ + H DLKP N+L +H
Sbjct: 126 FLHNK---GIAHRDLKPENILCEH 146
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 131
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 132 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 138
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 139 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 139
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 140 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 130
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 131 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 137
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVA 578
P + ++ +++ + IG+G++G V +++ VA+K I+ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCK 636
E + L RH N+I I I + + + +V + M L H SND + C
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CY 132
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
L Q + ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 133 F-LYQ-------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 697 HLDT 700
H T
Sbjct: 182 HDHT 185
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 520 PMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVA 578
P + ++ +++ + IG+G++G V +++ VA+K I+ + + + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 75
Query: 579 ECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCK 636
E + L RH N+I I I + + + +V + M L H SND + C
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CY 133
Query: 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
L Q + ++Y+H ++H DLKPSN+LL+ + DFGLA+
Sbjct: 134 F-LYQ-------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
Query: 697 HLDT 700
H T
Sbjct: 183 HDHT 186
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 131
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 132 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 513 SPMEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-- 566
S M ++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 18 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 77
Query: 567 ----LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGN 618
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 78 FQSIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA 130
Query: 619 GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++
Sbjct: 131 --------DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 179
Query: 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
D + DFGLA+ T G T Y AP
Sbjct: 180 DCELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 210
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 135
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 136 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V + +VAVK ++L+++ E +R+ +H N++++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 83
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSN---DQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ D +V E++ G+L D + + +Q+ L+++Q L++
Sbjct: 84 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVL---------- 132
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
H Q ++H D+K ++LL HD + DFG S + P + GT
Sbjct: 133 --HAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCA-------QVSKEVPRRKXLV-GTPY 181
Query: 717 YVAP 720
++AP
Sbjct: 182 WMAP 185
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V + +VAVK ++L+++ E +R+ +H N++++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 92
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSN---DQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ D +V E++ G+L D + + +Q+ L+++Q L++ L
Sbjct: 93 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV----------L 141
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
H ++H D+K ++LL HD + DFG S + P + GT
Sbjct: 142 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA-------QVSKEVPRRKXLV-GTPY 190
Query: 717 YVAP 720
++AP
Sbjct: 191 WMAP 194
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 513 SPMEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-- 566
S M ++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 78
Query: 567 ----LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGN 618
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 79 FQSIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA 131
Query: 619 GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++
Sbjct: 132 --------DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 180
Query: 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
D + DFGLA+ T G T Y AP
Sbjct: 181 DCELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 211
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + IG G++GSV + + VAVK ++
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 68 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 118
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 119 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXEL 169
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 170 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 196
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 34/190 (17%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYK----GILGEDEMI-VAVKVINLKQKGAFR-SFVAE 579
E + EF ++G G+FG V GI I VAVK++ K + R + ++E
Sbjct: 41 EFPRENLEFG--KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 580 CEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ-----SNDQVE 633
+ + + H N++ ++ C+ G + L+FEY G L ++L S D++E
Sbjct: 99 LKMMTQLGSHENIVNLLGACT---LSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIE 153
Query: 634 V---CKLSLIQRLNI---------AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 681
+L + LN+ A VA +E+L VH DL NVL+ H V
Sbjct: 154 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKV 210
Query: 682 AHVGDFGLAK 691
+ DFGLA+
Sbjct: 211 VKICDFGLAR 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V + +VAVK ++L+++ E +R+ +H N++++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 94
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSN---DQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ D +V E++ G+L D + + +Q+ L+++Q L++ L
Sbjct: 95 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV----------L 143
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
H ++H D+K ++LL HD + DFG S + P + GT
Sbjct: 144 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA-------QVSKEVPRRKXLV-GTPY 192
Query: 717 YVAP 720
++AP
Sbjct: 193 WMAP 196
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V + +VAVK ++L+++ E +R+ +H N++++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 87
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSN---DQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ D +V E++ G+L D + + +Q+ L+++Q L++
Sbjct: 88 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVL---------- 136
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVG 716
H Q ++H D+K ++LL HD + DFG S + P + GT
Sbjct: 137 --HAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCA-------QVSKEVPRRKXLV-GTPY 185
Query: 717 YVAP 720
++AP
Sbjct: 186 WMAP 189
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 43/199 (21%)
Query: 540 IGQGSFGSVY--KGILGEDEMIVAVKVINLKQ--KGAF-----------RSFVAECEALR 584
+G G++G V K G E A+KVI Q KG + E L+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEK--AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++ H N+IK+ + F+ + LV E+ G L + + + K N
Sbjct: 102 SLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQI------INRHKFDECDAAN 150
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVGDFGLAKFLSSHHLDTS 701
I + S I YLH H +VH D+KP N+LL++ + + DFGL+ F S +
Sbjct: 151 IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---- 203
Query: 702 SKTPSSSIGIKGTVGYVAP 720
K GT Y+AP
Sbjct: 204 -KLRDRL----GTAYYIAP 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 526 ELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI------NLKQKGAFRS 575
E++K E + +G G++G+V + G VA+K + L K A+R
Sbjct: 15 EVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR- 73
Query: 576 FVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGN--GSLEDWLHQSN 629
E L+++RH N+I ++ + + DF DF LV +MG G L
Sbjct: 74 ---ELRLLKHMRHENVIGLLDVFTPDETLDDF--TDF-YLVMPFMGTDLGKLMKHEKLGE 127
Query: 630 DQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689
D+++ +++ + Y+H ++H DLKP N+ ++ D + DFGL
Sbjct: 128 DRIQFLVYQMLK----------GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGL 174
Query: 690 AKFLSSH 696
A+ S
Sbjct: 175 ARQADSE 181
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---LKQKGAFRSFVAECEALRNIRHRN 590
F ++G+GSFG V + E + AVKV+ + Q + E L R+
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 591 LIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
+ + C F+ D V E++ G L + +S + + A ++
Sbjct: 85 FLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEII 134
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIG 710
SA+ +LH +++ DLK NVLLDH+ + DFG+ K + + T++
Sbjct: 135 SALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-------- 183
Query: 711 IKGTVGYVAP 720
GT Y+AP
Sbjct: 184 FCGTPDYIAP 193
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 521 MVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---LKQKGAFRSFV 577
+V E+ +F +IG+G+F V + + + A+K++N + ++G F
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 578 AECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQV--EVC 635
E + L N R + ++ F+ ++ LV EY G L L + +++ E+
Sbjct: 110 EERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688
+ L + + +AID + Y VH D+KP N+LLD + DFG
Sbjct: 165 RFYLAE-IVMAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFG 207
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 30/177 (16%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
+F IG GSFG +Y G + VA+K+ N+K K + E + R ++
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP--QLLYESKIYR------IL 59
Query: 593 KIITICSSTDFKGV--DFKALVFEYMGNGSLEDWLHQSNDQVEVC--KLSLIQRLNIAID 648
+ T + + GV D+ LV + +G SLED + C KLSL L +A
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGP-SLEDLFN-------FCSRKLSLKTVLMLADQ 111
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + +E++H +H D+KP N L+ A ++ DFGLAK + DTS+
Sbjct: 112 MINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK----KYRDTST 161
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 135
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 136 LRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT 183
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 513 SPMEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-- 566
S M ++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 78
Query: 567 ----LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGN 618
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 79 FQSIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA 131
Query: 619 GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++
Sbjct: 132 --------DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 180
Query: 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
D + DFGLA+ T G T Y AP
Sbjct: 181 DCELKILDFGLAR-----------HTDDEMXGXVATRWYRAP 211
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 505 SAHNSADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKV 564
SAH ++P+ K+ P V + + +G+G F Y+ + + + A KV
Sbjct: 18 SAHVDPKSAPL-KEIPDVLVD--PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV 74
Query: 565 INLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDW 624
+ + + E + H++L + F+ DF +V E SL +
Sbjct: 75 V--PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE- 131
Query: 625 LHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684
LH+ V + R I ++YLH++ ++H DLK N+ L+ DM +
Sbjct: 132 LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKI 183
Query: 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
GDFGLA + D K + GT Y+AP
Sbjct: 184 GDFGLATKIE---FDGERKK-----DLCGTPNYIAP 211
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ D+GLA+ T G T Y AP
Sbjct: 163 ELKILDYGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 505 SAHNSADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKV 564
SAH ++P+ K+ P V + + +G+G F Y+ + + + A KV
Sbjct: 18 SAHVDPKSAPL-KEIPDVLVD--PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV 74
Query: 565 INLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDW 624
+ + + E + H++L + F+ DF +V E SL +
Sbjct: 75 V--PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE- 131
Query: 625 LHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684
LH+ V + R I ++YLH++ ++H DLK N+ L+ DM +
Sbjct: 132 LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKI 183
Query: 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
GDFGLA + D K + GT Y+AP
Sbjct: 184 GDFGLATKIE---FDGERKK-----TLCGTPNYIAP 211
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V + +VAVK ++L+++ E +R+ +H N++++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSN---DQVEVCKLSLIQRLNIAIDVASAIEYL 656
D V V E++ G+L D + + +Q+ L+++Q L++ L
Sbjct: 142 VGDELWV-----VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV----------L 186
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
H ++H D+K ++LL HD + DFG +S
Sbjct: 187 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V + +VAVK ++L+++ E +R+ +H N++++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 214
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSN---DQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ D +V E++ G+L D + + +Q+ L+++Q L++ L
Sbjct: 215 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV----------L 263
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH 696
H ++H D+K ++LL HD + DFG +S
Sbjct: 264 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 23/192 (11%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
S+++GQG+ +V++G + + A+KV N+ + E E L+ + H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
I T + K L+ E+ GSL L + ++ L + L + DV + +
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNH 127
Query: 656 LHHHCQPPMVHGDLKPSNVLL----DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
L + +VH ++KP N++ D V + DFG A+ L + +
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---------DEQFVSL 175
Query: 712 KGTVGYVAPGKF 723
GT Y+ P +
Sbjct: 176 YGTEEYLHPDMY 187
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI---LGEDEMIVAVKVINLKQKG--- 571
Q P E + +F + +G G+FG V + LG+++ ++ V V LK
Sbjct: 26 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 83
Query: 572 AFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN- 629
+ ++E + + ++ +H N++ ++ C+ V + EY G L ++L +
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKAE 138
Query: 630 ---DQVEVCKLSLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
D+ + L L L+ + VA + +L +C +H D+ NVLL + VA +G
Sbjct: 139 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 194
Query: 686 DFGLAK 691
DFGLA+
Sbjct: 195 DFGLAR 200
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMAGFVATRWYRAP 191
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 591
+++ + IG+G++G V +++ VA++ I+ + + + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNG--SLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
I I I + + + +V + M L H SND + C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 137
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+LL+ + DFGLA+ H T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 505 SAHNSADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKV 564
SAH ++P+ K+ P V + + +G+G F Y+ + + + A KV
Sbjct: 18 SAHVDPKSAPL-KEIPDVLVD--PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV 74
Query: 565 INLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDW 624
+ + + E + H++L + F+ DF +V E SL +
Sbjct: 75 V--PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE- 131
Query: 625 LHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684
LH+ V + R I ++YLH++ ++H DLK N+ L+ DM +
Sbjct: 132 LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKI 183
Query: 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
GDFGLA + D K + GT Y+AP
Sbjct: 184 GDFGLATKIE---FDGERKK-----XLCGTPNYIAP 211
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMAGFVATRWYRAP 191
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 163 ELKILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKII 595
S+++GQG+ +V++G + + A+KV N+ + E E L+ + H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
I T + K L+ E+ GSL L + ++ L + L + DV + +
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNH 127
Query: 656 LHHHCQPPMVHGDLKPSNVLL----DHDMVAHVGDFGLAKFLSS 695
L + +VH ++KP N++ D V + DFG A+ L
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 68 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 118
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 119 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXEL 169
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 170 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 196
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINL-KQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
+G G+FG V+ + +K IN + + AE E L+++ H N+IKI +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV- 88
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
F+ +V E G L + + + + + + L + +A+ Y H
Sbjct: 89 ----FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL--MKQMMNALAYFHS 142
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAH----VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGT 714
+VH DLKP N+L D H + DFGLA+ K+ S GT
Sbjct: 143 QH---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELF---------KSDEHSTNAAGT 189
Query: 715 VGYVAPGKF 723
Y+AP F
Sbjct: 190 ALYMAPEVF 198
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLIK 593
+G G F V K + A K I +Q A R V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 594 IITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ + + TD L+ E + G L D+L Q E S I++ +
Sbjct: 80 LHDVYENRTDV------VLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDG 127
Query: 653 IEYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHVG--DFGLAKFLSSHHLDTSSKTPSSS 708
+ YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN-- 177
Query: 709 IGIKGTVGYVAP 720
I GT +VAP
Sbjct: 178 --IFGTPEFVAP 187
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLIK 593
+G G F V K + A K I +Q A R V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 594 IITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ + + TD L+ E + G L D+L Q E S I++ +
Sbjct: 80 LHDVYENRTDV------VLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDG 127
Query: 653 IEYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHVG--DFGLAKFLSSHHLDTSSKTPSSS 708
+ YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN-- 177
Query: 709 IGIKGTVGYVAP 720
I GT +VAP
Sbjct: 178 --IFGTPEFVAP 187
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI---LGEDEMIVAVKVINLKQKG--- 571
Q P E + +F + +G G+FG V + LG+++ ++ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 572 AFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN- 629
+ ++E + + ++ +H N++ ++ C+ V + EY G L ++L +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKAE 146
Query: 630 ---DQVEVCKLSLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
D+ + L L L+ + VA + +L +C +H D+ NVLL + VA +G
Sbjct: 147 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 202
Query: 686 DFGLAK 691
DFGLA+
Sbjct: 203 DFGLAR 208
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLIK 593
+G G F V K + A K I +Q A R V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 594 IITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ + + TD L+ E + G L D+L Q E S I++ +
Sbjct: 80 LHDVYENRTDV------VLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDG 127
Query: 653 IEYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHVG--DFGLAKFLSSHHLDTSSKTPSSS 708
+ YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN-- 177
Query: 709 IGIKGTVGYVAP 720
I GT +VAP
Sbjct: 178 --IFGTPEFVAP 187
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLIK 593
+G G F V K + A K I +Q A R V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 594 IITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ + + TD L+ E + G L D+L Q E S I++ +
Sbjct: 80 LHDVYENRTDV------VLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDG 127
Query: 653 IEYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHVG--DFGLAKFLSSHHLDTSSKTPSSS 708
+ YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN-- 177
Query: 709 IGIKGTVGYVAP 720
I GT +VAP
Sbjct: 178 --IFGTPEFVAP 187
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 536 SSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFV-AECEALRNIR-HRNLIK 593
+S ++G+G++ V + ++ AVK+I KQ G RS V E E L + ++N+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+I F+ LVFE + GS+ + + + + + DVA+A+
Sbjct: 76 LIEF-----FEDDTRFYLVFEKLQGGSILAHIQKQK------HFNEREASRVVRDVAAAL 124
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVG--DFGLAKFLSSHHLDTSSKTPSSSIG 710
++LH + H DLKP N+L + + V+ V DF L + ++ T TP +
Sbjct: 125 DFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 711 IKGTVGYVAP 720
G+ Y+AP
Sbjct: 182 C-GSAEYMAP 190
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 33/195 (16%)
Query: 534 FSSSNMIGQGSFGS-VYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALR-NIRHRNL 591
F +++G G+ G+ VY+G+ D VAVK I L + +F E + LR + H N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRI-LPECFSFAD--REVQLLRESDEHPNV 80
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN-DQVEVCKLSLIQRLNIAIDVA 650
I+ C+ D + F+ + E + +L++++ Q + + + ++L+Q+
Sbjct: 81 IRYF--CTEKDRQ---FQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQ------TT 128
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLD----HDMV-AHVGDFGLAKFLSSHHLDTSSKTP 705
S + +LH +VH DLKP N+L+ H + A + DFGL K L+ +
Sbjct: 129 SGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA-----VGRHSF 180
Query: 706 SSSIGIKGTVGYVAP 720
S G+ GT G++AP
Sbjct: 181 SRRSGVPGTEGWIAP 195
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Query: 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLG--GKFPTTLGLLRNLVQLNVAENK 72
L+ L L+ N + +F+G L L+ + + ++L +F L L RNL+ L+++
Sbjct: 80 LKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHTH 137
Query: 73 FYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSN 132
F +SSLE + N F + DI L NL L + L P + ++
Sbjct: 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 197
Query: 133 ASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKV 192
S+L++L++S+N F + + L L L+ N++ +L SSL
Sbjct: 198 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----SSLAF 252
Query: 193 LSLSDNQFGGELPH 206
L+L+ N F H
Sbjct: 253 LNLTQNDFACTCEH 266
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 45/219 (20%)
Query: 85 SSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGAN--NFFGLIPDSLSNASNLELLDLS 142
SS L SN+ SLP + L L +L + +N +F G S ++L+ LDLS
Sbjct: 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86
Query: 143 NNQFKGKVSI--DFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQ- 199
F G +++ +F L+ L L+ + +NL + F FL+ +L L +S
Sbjct: 87 ---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSE----FSVFLS-LRNLIYLDISHTHT 138
Query: 200 ---FGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDV 256
F G I N S++ V + GN +PD+
Sbjct: 139 RVAFNG-----IFNGLSSLEVLKMAGNSFQENF-----------------------LPDI 170
Query: 257 IGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSN 295
EL+NL L L + L+ P+ +L+ L L++ N
Sbjct: 171 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 338 PQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKF 397
P L+NL LD+S Q + P ++ SL+ +++S N F + L S++
Sbjct: 168 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227
Query: 398 LDVSCNN 404
LD S N+
Sbjct: 228 LDYSLNH 234
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 12 LFKLQALALAGN-YLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAE 70
L L+ L +AGN + LPD L L + + L PT L +L LN++
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 71 NKFYGM--FPRSICN-ISSLEY 89
N F+ + FP N + L+Y
Sbjct: 209 NNFFSLDTFPYKCLNSLQVLDY 230
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 26 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 86 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 136
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 137 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 187
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 188 KILDFGLAR-----------HTDDEMXGYVATRWYRAP 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRN 585
+K + + +G+G+F V + + + A K+IN K+ A F+ E R
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 84
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 85 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 136
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVGDFGLAKFLSSHHLDTSS 702
+ +I Y H + +VH +LKP N+LL + DFGLA
Sbjct: 137 ---ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 181
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 182 NDSEAWHGFAGTPGYLSP 199
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 32/199 (16%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA---------ECE 581
+ ++S+ + +G G+FG V+ + E V VK I K+K ++ E
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIA 81
Query: 582 ALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQ 641
L + H N+IK++ I F+ F LV E G+G + +++ S I
Sbjct: 82 ILSRVEHANIIKVLDI-----FENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTS 701
R + SA+ YL ++H D+K N+++ D + DFG A +L L +
Sbjct: 137 R-----QLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 702 SKTPSSSIGIKGTVGYVAP 720
GT+ Y AP
Sbjct: 189 ---------FCGTIEYCAP 198
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 70 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 120
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 121 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 171
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 172 KILDFGLAR-----------HTADEMTGYVATRWYRAP 198
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLIK 593
+G G F V K + A K I +Q A R V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 594 IITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ + + TD L+ E + G L D+L Q E S I++ +
Sbjct: 80 LHDVYENRTDV------VLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDG 127
Query: 653 IEYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHVG--DFGLAKFLSSHHLDTSSKTPSSS 708
+ YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN-- 177
Query: 709 IGIKGTVGYVAP 720
I GT +VAP
Sbjct: 178 --IFGTPEFVAP 187
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 69 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 119
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 120 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 170
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 171 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 197
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 68 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 118
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 119 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 169
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 170 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 196
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 5 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 65 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 115
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 116 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 166
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 167 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 193
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 2 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 61
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 62 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 112
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 113 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 163
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 164 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 190
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 70 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 120
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 121 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 171
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 172 KILDFGLAR-----------HTADEMTGYVATRWYRAP 198
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 70 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 120
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 121 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 171
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 172 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 198
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 70 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 120
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 121 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 171
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 172 KILDFGLAR-----------HTADEMTGYVATRWYRAP 198
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 63 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 113
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 164
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 165 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 520 PMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQ 569
P EL+K E + + + +G G++GSV + + VAVK ++ +
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWL 625
K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 64 KRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA------- 109
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 110 -DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 165
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 166 DFGLAR-----------HTDDEMTGYVATRWYRAP 189
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 520 PMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQ 569
P EL+K E + + + +G G++GSV + + VAVK ++ +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWL 625
K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 63 KRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL----- 110
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 111 ---NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 164
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 165 DFGLAR-----------HTDDEMTGYVATRWYRAP 188
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRN 585
+K + + +G+G+F V + + + A K+IN K+ A F+ E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 62 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 113
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVGDFGLAKFLSSHHLDTSS 702
+ +I Y H + +VH +LKP N+LL + DFGLA
Sbjct: 114 ---ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 158
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 159 NDSEAWHGFAGTPGYLSP 176
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 520 PMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQ 569
P EL+K E + + + +G G++GSV + + VAVK ++ +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWL 625
K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 63 KRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL----- 110
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 111 ---NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 164
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 165 DFGLAR-----------HTDDEMTGYVATRWYRAP 188
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG VYK E + A KVI K + ++ E E L H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 600 STDFKGVDFK-ALVFEYMGNGSLEDWLHQ-----SNDQVEVCKLSLIQRLNIAIDVASAI 653
D K ++ E+ G+++ + + + Q++V +++ LN
Sbjct: 79 H------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN--------- 123
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF-LSSHHLDTSSKTPSSSIGIK 712
+LH ++H DLK NVL+ + GD LA F +S+ +L T K S
Sbjct: 124 -FLHSKR---IIHRDLKAGNVLMTLE-----GDIRLADFGVSAKNLKTLQKRDS----FI 170
Query: 713 GTVGYVAP 720
GT ++AP
Sbjct: 171 GTPYWMAP 178
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 520 PMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQ 569
P EL+K E + + + +G G++GSV + + VAVK ++ +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWL 625
K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 62 KRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL----- 109
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 110 ---NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 164 DFGLAR-----------HTDDEMTGYVATRWYRAP 187
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 43/215 (20%)
Query: 520 PMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQ 569
P EL+K E + + + +G G++GSV + VAVK ++ +
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWL 625
K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 62 KRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA------- 107
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 108 -DLNNIVKCAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 164 DFGLAR-----------HTDDEMTGYVATRWYRAP 187
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG VYK E + A KVI K + ++ E E L H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 600 STDFKGVDFK-ALVFEYMGNGSLEDWLHQ-----SNDQVEVCKLSLIQRLNIAIDVASAI 653
D K ++ E+ G+++ + + + Q++V +++ LN
Sbjct: 87 H------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN--------- 131
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF-LSSHHLDTSSKTPSSSIGIK 712
+LH ++H DLK NVL+ + GD LA F +S+ +L T K S
Sbjct: 132 -FLHSKR---IIHRDLKAGNVLMTLE-----GDIRLADFGVSAKNLKTLQKRDS----FI 178
Query: 713 GTVGYVAP 720
GT ++AP
Sbjct: 179 GTPYWMAP 186
>pdb|1XWD|C Chain C, Crystal Structure Of Human Follicle Stimulating Hormone
Complexed With Its Receptor
pdb|1XWD|F Chain F, Crystal Structure Of Human Follicle Stimulating Hormone
Complexed With Its Receptor
Length = 252
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 59 LLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGI- 117
L RN ++L K + + LE ++ N + D+ NLP L E+ I
Sbjct: 28 LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87
Query: 118 GANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLE-QNNLGIGAAN 176
ANN + P++ N NL+ L +SN K D + L ++ L+ Q+N+ I
Sbjct: 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLP--DVHKIHSLQKVLLDIQDNINIHTIE 145
Query: 177 DLGFVTF----------------LTNC----SSLKVLSLSDNQFGGELPHSIANLSSTMI 216
FV + NC + L L+LSDN ELP+ + + +S +
Sbjct: 146 RNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPV 205
Query: 217 VFLIGGNQISGTIPLGIRNLVNLIA 241
+ I +I G+ NL L A
Sbjct: 206 ILDISRTRIHSLPSYGLENLKKLRA 230
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 27/195 (13%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRNIRH 588
T E+ IG+G+F V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++++ S F LVF+ + G L + + E IQ++ A+
Sbjct: 63 SNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV- 116
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVGDFGLAKFLSSHHLDTSSKTP 705
LH H Q +VH DLKP N+LL + DFGLA +
Sbjct: 117 -------LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG--------DQ 160
Query: 706 SSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 161 QAWFGFAGTPGYLSP 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRN 585
+K + + +G+G+F V + + + A K+IN K+ A F+ E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 62 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 113
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVGDFGLAKFLSSHHLDTSS 702
+ +I Y H + +VH +LKP N+LL + DFGLA
Sbjct: 114 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 158
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 159 NDSEAWHGFAGTPGYLSP 176
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL--RNIRHR 589
++F+ ++G+GSFG V E + A+K+ LK+ + EC + R +
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALL 76
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
+ +T S F+ VD V EY+ G L + Q V K Q + A ++
Sbjct: 77 DKPPFLTQLHSC-FQTVDRLYFVMEYVNGGDLMYHIQQ------VGKFKEPQAVFYAAEI 129
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + +LH +++ DLK NV+LD + + DFG+ K H +D ++
Sbjct: 130 SIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDG-----VTTR 178
Query: 710 GIKGTVGYVAP 720
GT Y+AP
Sbjct: 179 EFCGTPDYIAP 189
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 532 SEFSSSNMIGQGSFG---SVYKGILGEDEMIVAVKVINLKQKGAF------RSFVAECEA 582
E+ IG G++G S + + G+ VA+K I AF + + E +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQ---VAIKKI----PNAFDVVTNAKRTLRELKI 106
Query: 583 LRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWLHQSND-QVEVCKL 637
L++ +H N+I I I T +FK V +V + M L +H S +E +
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSV---YVVLDLM-ESDLHQIIHSSQPLTLEHVRY 162
Query: 638 SLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
L Q L ++Y+H ++H DLKPSN+L++ + +GDFG+A+ L +
Sbjct: 163 FLYQLLR-------GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRN 585
+K + + +G+G+F V + + + A K+IN K+ A F+ E R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
++H N++++ + F LVF+ + G L + + E IQ+
Sbjct: 61 LQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--- 112
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVGDFGLAKFLSSHHLDTSS 702
+ +I Y H + +VH +LKP N+LL + DFGLA
Sbjct: 113 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEV 157
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 158 NDSEAWHGFAGTPGYLSP 175
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI---LGEDEMIVAVKVINLKQKG--- 571
Q P E + +F + +G G+FG V + LG+++ ++ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 572 AFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSND 630
+ ++E + + ++ +H N++ ++ C+ V + EY G L ++L + +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKSR 146
Query: 631 QVEV--------CKLSLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLDHDMV 681
+E LS L+ + VA + +L +C +H D+ NVLL + V
Sbjct: 147 VLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHV 202
Query: 682 AHVGDFGLAK 691
A +GDFGLA+
Sbjct: 203 AKIGDFGLAR 212
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 200 FGGELPHSIANLSS-TMIVFLI-GGNQISGTIPLGI-RNLVNLIALAVEVNQLHGTIPD- 255
GG H I+ L T + +LI GNQ+ ++P G+ L NL L + NQL ++PD
Sbjct: 70 LGGNKLHDISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDG 127
Query: 256 VIGELKNLQLLGLYKNFLQGSIPSGL-GNLTKLAKLDLGSNSLQ 298
V +L NL L L N LQ S+P G+ LT L +LDL N LQ
Sbjct: 128 VFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQ 170
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 11/181 (6%)
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
L N+ L + NK + + ++ +++L Y LT N+ SLP + L NLKEL +
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 120 NNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLG 179
N L +NL L+L++NQ + F L L L+L N L G
Sbjct: 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE---G 175
Query: 180 FVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNL 239
LT LK L L NQ +P + + +++ + N T P GIR L
Sbjct: 176 VFDKLT---QLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP-GIRYLSEW 230
Query: 240 I 240
I
Sbjct: 231 I 231
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 37/189 (19%)
Query: 109 LPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168
LPN++ L +G N + +L +NL L L+ NQ + +
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPN----------------- 102
Query: 169 NLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGT 228
G LTN LK L L +NQ LP + + + + + NQ+ +
Sbjct: 103 ----------GVFDKLTN---LKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQ-S 147
Query: 229 IPLGI-RNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGL-GNLTK 286
+P G+ L NL L + NQL V +L L+ L LY+N L+ S+P G+ LT
Sbjct: 148 LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTS 206
Query: 287 LAKLDLGSN 295
L + L N
Sbjct: 207 LQYIWLHDN 215
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Query: 9 IGSLFKLQALALAGNYLTGKLPDF--IGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQL 66
I L ++ LAL GN KL D + L+ L + + GN L L NL +L
Sbjct: 59 IQYLPNVRYLALGGN----KLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114
Query: 67 NVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLI 126
+ EN+ + +++L Y L N+ SLP + L NL EL + N L
Sbjct: 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLP 173
Query: 127 PDSLSNASNLELLDLSNNQFKG---KVSIDFSSLKILW 161
+ L+ L L NQ K V +SL+ +W
Sbjct: 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 211
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 170 LGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTI 229
L +G N L ++ L ++L L L+ NQ LP+ + + + + ++ NQ+ ++
Sbjct: 68 LALGG-NKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQ-SL 124
Query: 230 PLGI-RNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGL-GNLTKL 287
P G+ L NL L + NQL V +L NL L L N LQ S+P G+ LT+L
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQL 183
Query: 288 AKLDLGSNSLQ 298
L L N L+
Sbjct: 184 KDLRLYQNQLK 194
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 55 TTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKE 114
+ L L NL L + N+ + +++L+ L N+ SLP + L NL
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTY 137
Query: 115 LGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGA 174
L + N L +NL LDLS NQ + F L L L L QN L +
Sbjct: 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL--KS 195
Query: 175 ANDLGFVTFLTNCSSLKVLSLSDNQFGGELP 205
D G LT SL+ + L DN + P
Sbjct: 196 VPD-GVFDRLT---SLQYIWLHDNPWDCTCP 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 532 SEFSSSNMIGQGSFG---SVYKGILGEDEMIVAVKVINLKQKGAF------RSFVAECEA 582
E+ IG G++G S + + G+ VA+K I AF + + E +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQ---VAIKKI----PNAFDVVTNAKRTLRELKI 107
Query: 583 LRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWLHQSND-QVEVCKL 637
L++ +H N+I I I T +FK V +V + M L +H S +E +
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSV---YVVLDLM-ESDLHQIIHSSQPLTLEHVRY 163
Query: 638 SLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
L Q L ++Y+H ++H DLKPSN+L++ + +GDFG+A+ L +
Sbjct: 164 FLYQLLR-------GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 211
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI--NLKQKGAFR-SFVAECEALR 584
S + + ++G G V+ D VAVKV+ +L + +F F E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H ++ + + G +V EY+ +L D +H ++ + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAG-PLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIE 120
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
+ D A+ + H + ++H D+KP+N+++ V DFG+A+ ++ S +
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNS 172
Query: 705 PSSSIGIKGTVGYVAP 720
+ + + GT Y++P
Sbjct: 173 VTQTAAVIGTAQYLSP 188
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Query: 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLG--GKFPTTLGLLRNLVQLNVAENK 72
L+ L L+ N + +F+G L L+ + + ++L +F L L RNL+ L+++
Sbjct: 375 LKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHTH 432
Query: 73 FYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSN 132
F +SSLE + N F + DI L NL L + L P + ++
Sbjct: 433 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 492
Query: 133 ASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKV 192
S+L++L++S+N F + + L L L+ N++ +L SSL
Sbjct: 493 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----SSLAF 547
Query: 193 LSLSDNQFGGELPH 206
L+L+ N F H
Sbjct: 548 LNLTQNDFACTCEH 561
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+A+ + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 98 GLSSLQKLVAVETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 155 DLSSNKIQS 163
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 49/232 (21%)
Query: 74 YGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGAN--NFFGLIPDSLS 131
+G FP + SL+ TSN+ + V+LP+L+ L + N +F G S
Sbjct: 316 FGQFP--TLKLKSLKRLTFTSNKGGNAFS---EVDLPSLEFLDLSRNGLSFKGCCSQSDF 370
Query: 132 NASNLELLDLSNNQFKGKVSI--DFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSS 189
++L+ LDLS F G +++ +F L+ L L+ + +NL + F FL+ +
Sbjct: 371 GTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSE----FSVFLS-LRN 422
Query: 190 LKVLSLSDNQ----FGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
L L +S F G I N S++ V + GN
Sbjct: 423 LIYLDISHTHTRVAFNG-----IFNGLSSLEVLKMAGNSFQENF---------------- 461
Query: 246 VNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSL 297
+PD+ EL+NL L L + L+ P+ +L+ L L++ N+
Sbjct: 462 -------LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 338 PQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKF 397
P L+NL LD+S Q + P ++ SL+ +++S N F + L S++
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 522
Query: 398 LDVSCNN 404
LD S N+
Sbjct: 523 LDYSLNH 529
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 175
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLI 592
++ IG+G++G V + VA+K I+ + + + + E + L RH N+I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
I I ++ + + +V + M + Q +C L Q +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF-LYQ-------ILRG 156
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDT 700
++Y+H ++H DLKPSN+L++ + DFGLA+ H T
Sbjct: 157 LKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHT 201
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 83/196 (42%), Gaps = 18/196 (9%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI--NLKQKGAFR-SFVAECEALR 584
S + + ++G G V+ D VAVKV+ +L + +F F E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H ++ + + G +V EY+ +L D +H ++ + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAG-PLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIE 120
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
+ D A+ + H + ++H D+KP+N+L+ V DFG+A+ ++ S +
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD-----SGNS 172
Query: 705 PSSSIGIKGTVGYVAP 720
+ + GT Y++P
Sbjct: 173 VXQTAAVIGTAQYLSP 188
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVI--NLKQKGAFR-SFVAECEALR 584
S + + ++G G V+ D VAVKV+ +L + +F F E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ H ++ + + G +V EY+ +L D +H ++ + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIE 120
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
+ D A+ + H + ++H D+KP+N+++ V DFG+A+ ++ S +
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNS 172
Query: 705 PSSSIGIKGTVGYVAP 720
+ + + GT Y++P
Sbjct: 173 VTQTAAVIGTAQYLSP 188
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 9/194 (4%)
Query: 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLG--GKFPTTLGLLRNLVQLNVAENK 72
L+ L L+ N + +F+G L L+ + + ++L +F L L RNL+ L+++
Sbjct: 399 LKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHTH 456
Query: 73 FYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSN 132
F +SSLE + N F + DI L NL L + L P + ++
Sbjct: 457 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 516
Query: 133 ASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKV 192
S+L++L++S+N F + + L L L+ N++ +L SSL
Sbjct: 517 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----SSLAF 571
Query: 193 LSLSDNQFGGELPH 206
L+L+ N F H
Sbjct: 572 LNLTQNDFACTCEH 585
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+A+ + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 122 GLSSLQKLVAVETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 178
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 179 DLSSNKIQS 187
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 338 PQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKF 397
P L+NL LD+S Q + P ++ SL+ +++S N F + L S++
Sbjct: 487 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546
Query: 398 LDVSCNN 404
LD S N+
Sbjct: 547 LDYSLNH 553
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 49/232 (21%)
Query: 74 YGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGAN--NFFGLIPDSLS 131
+G FP + SL+ TSN+ + V+LP+L+ L + N +F G S
Sbjct: 340 FGQFP--TLKLKSLKRLTFTSNKGGNAFS---EVDLPSLEFLDLSRNGLSFKGCCSQSDF 394
Query: 132 NASNLELLDLSNNQFKGKVSI--DFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSS 189
+L+ LDLS F G +++ +F L+ L L+ + +NL + F FL+ +
Sbjct: 395 GTISLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSE----FSVFLS-LRN 446
Query: 190 LKVLSLSDNQ----FGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
L L +S F G I N S++ V + GN
Sbjct: 447 LIYLDISHTHTRVAFNG-----IFNGLSSLEVLKMAGNSFQENF---------------- 485
Query: 246 VNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSL 297
+PD+ EL+NL L L + L+ P+ +L+ L L++ N+
Sbjct: 486 -------LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 146 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 199
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 709 IGIKGTVGYVAP 720
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 546 GSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605
G ++KG ++++V V + R F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---P 80
Query: 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMV 665
L+ + GSL + LH+ + V + Q + A+D A +L H +P +
Sbjct: 81 APHPTLITHWXPYGSLYNVLHEGTNFV----VDQSQAVKFALDXARGXAFL-HTLEPLIP 135
Query: 666 HGDLKPSNVLLDHDMVAHV 684
L +V +D D A +
Sbjct: 136 RHALNSRSVXIDEDXTARI 154
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 709 IGIKGTVGYVAP 720
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 709 IGIKGTVGYVAP 720
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 709 IGIKGTVGYVAP 720
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLIK 593
+G G F V K + A K I +Q A R V E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 594 IITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ + + TD L+ E + G L D+L Q E S I++ +
Sbjct: 80 LHDVYENRTDV------VLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDG 127
Query: 653 IEYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHVG--DFGLAKFLSSHHLDTSSKTPSSS 708
+ YLH + H DLKP N+ LLD ++ + H+ DFGLA H ++ + +
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN-- 177
Query: 709 IGIKGTVGYVAP 720
I GT +VAP
Sbjct: 178 --IFGTPEFVAP 187
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + VH DL NVLL A + DFGL+K L + ++T K V
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-----KWPV 178
Query: 716 GYVAP 720
+ AP
Sbjct: 179 KWYAP 183
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 28/190 (14%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK 593
F + +G+G+ VY+ + A+KV LK+ + E L + H N+IK
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKV--LKKTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ I F+ +LV E + G L D + VE S + + A+
Sbjct: 113 LKEI-----FETPTEISLVLELVTGGELFDRI------VEKGYYSERDAADAVKQILEAV 161
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIG 710
YLH + +VH DLKP N+L D + DFGL+K + L +
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--------- 209
Query: 711 IKGTVGYVAP 720
+ GT GY AP
Sbjct: 210 VCGTPGYCAP 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 68
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 69 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 119
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 120 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 170
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 171 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 197
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 134 SNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNL---GIGAANDLGFVTFLTNCSSL 190
++ E LDL + F L L LNL+ N L G +DL + L
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL---------TEL 85
Query: 191 KVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGI-RNLVNLIALAVEVNQL 249
L L++NQ LP + + + + +GGNQ+ ++P G+ L L L + NQL
Sbjct: 86 GTLGLANNQLAS-LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143
Query: 250 HGTIPDVIGELKNLQLLGLYKNFLQGSIPSG 280
+L NLQ L L N LQ S+P G
Sbjct: 144 QSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHG 173
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 233 IRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGL-GNLTKLAKLD 291
R L L L ++ NQL V +L L LGL N L S+P G+ +LT+L KL
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLY 113
Query: 292 LGSNSLQ 298
LG N L+
Sbjct: 114 LGGNQLK 120
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
L L L +A N+ + +++ L+ YL N+ SLP + L LKEL +
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNT 140
Query: 120 NNFFGLIPDSLSNASNLELLDLSNNQFK 147
N + + +NL+ L LS NQ +
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
L L LN+ N+ + +++ L L +N+ + SLP + +L L +L +G
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 120 NNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGI---GAAN 176
N L + L+ L L+ NQ + + F L L L+L N L GA +
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 177 DLGFVTFLT------NCSSLKVLSLS 196
LG + +T +CS + L LS
Sbjct: 177 RLGKLQTITLFGNQFDCSRCETLYLS 202
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 134 SNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNL---GIGAANDLGFVTFLTNCSSL 190
++ E LDL + F L L LNL+ N L G +DL + L
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL---------TEL 85
Query: 191 KVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGI-RNLVNLIALAVEVNQL 249
L L++NQ LP + + + + +GGNQ+ ++P G+ L L L + NQL
Sbjct: 86 GTLGLANNQLAS-LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143
Query: 250 HGTIPDVIGELKNLQLLGLYKNFLQGSIPSG 280
+L NLQ L L N LQ S+P G
Sbjct: 144 QSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHG 173
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
L L LN+ N+ + +++ L L +N+ + SLP + +L L +L +G
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 120 NNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGI---GAAN 176
N L + L+ L L+ NQ + + F L L L+L N L GA +
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 177 DLGFVTFLT------NCSSLKVLSLS 196
LG + +T +CS ++L LS
Sbjct: 177 RLGKLQTITLFGNQFDCSRCEILYLS 202
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 234 RNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGL-GNLTKLAKLDL 292
R L L L ++ NQL V +L L LGL N L S+P G+ +LT+L KL L
Sbjct: 56 RGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYL 114
Query: 293 GSNSLQ 298
G N L+
Sbjct: 115 GGNQLK 120
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 43/215 (20%)
Query: 520 PMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQ 569
P EL+K E + + + +G G++GSV + VAVK ++ +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWL 625
K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 62 KRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL----- 109
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 110 ---NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 164 DFGLAR-----------HTDDEMTGYVATRWYRAP 187
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G+G++G V K I+AVK I R+ V E R + ++ C
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 600 ST-DFKGVDFKA----LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
T F G F+ + E M + SL+ + Q D+ + ++ + IA+ + A+E
Sbjct: 111 FTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 167
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGT 714
+LH ++H D+KPSNVL++ + DFG++ +L +D+ +KT + G
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDA-----GC 216
Query: 715 VGYVAPGK 722
Y+AP +
Sbjct: 217 KPYMAPER 224
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ D GLA+ T G T Y AP
Sbjct: 163 ELKILDRGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 43/215 (20%)
Query: 520 PMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQ 569
P EL+K E + + + +G G++GSV + VAVK ++ +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 570 KGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLEDWL 625
K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 62 KRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGA------- 107
Query: 626 HQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 108 -DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
DFGLA+ T G T Y AP
Sbjct: 164 DFGLAR-----------HTDDEMAGFVATRWYRAP 187
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ D GLA+ T G T Y AP
Sbjct: 163 ELKILDAGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 19/192 (9%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRH 588
+ + +G+G F Y+ + + + A KV+ + + E + H
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQKEKMSTEIAIH 80
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
++L + F+ DF +V E SL + LH+ V + R I
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI--- 136
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSS 708
++YLH++ ++H DLK N+ L+ DM +GDFGLA + D K
Sbjct: 137 --QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE---FDGERKK---- 184
Query: 709 IGIKGTVGYVAP 720
+ GT Y+AP
Sbjct: 185 -DLCGTPNYIAP 195
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ FGLA+ T G T Y AP
Sbjct: 163 ELKILGFGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI---LGEDEMIVAVKVINLKQKG--- 571
Q P E + +F + +G G+FG V + LG+++ ++ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 572 AFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSND 630
+ ++E + + ++ +H N++ ++ C+ V + EY G L ++L + +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKSR 146
Query: 631 QVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPM----------VHGDLKPSNVLLDHDM 680
+E IA AS + LH Q +H D+ NVLL +
Sbjct: 147 VLETDPA-----FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201
Query: 681 VAHVGDFGLAK 691
VA +GDFGLA+
Sbjct: 202 VAKIGDFGLAR 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 34/195 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRS-----FVAECEALRNIRH 588
+ +G G++G V +L D++ + I + +K + + + E L+ + H
Sbjct: 39 YQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648
N++K+ F+ LV E G L D + + K + + I
Sbjct: 96 PNIMKLYDF-----FEDKRNYYLVMECYKGGELFDEI------IHRMKFNEVDAAVIIKQ 144
Query: 649 VASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
V S + YLH H +VH DLKP N+LL + D + + DFGL+ + K
Sbjct: 145 VLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ------KKM 195
Query: 706 SSSIGIKGTVGYVAP 720
+ GT Y+AP
Sbjct: 196 KERL---GTAYYIAP 207
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 73 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 120
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + VH DL NVLL A + DFGL+K L + ++T K V
Sbjct: 121 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 172
Query: 716 GYVAP 720
+ AP
Sbjct: 173 KWYAP 177
>pdb|4AY9|X Chain X, Structure Of Follicle-Stimulating Hormone In Complex With
The Entire Ectodomain Of Its Receptor
pdb|4AY9|Y Chain Y, Structure Of Follicle-Stimulating Hormone In Complex With
The Entire Ectodomain Of Its Receptor
pdb|4AY9|Z Chain Z, Structure Of Follicle-Stimulating Hormone In Complex With
The Entire Ectodomain Of Its Receptor
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 59 LLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGI- 117
L RN ++L K + + LE ++ N + D+ NLP L E+ I
Sbjct: 28 LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87
Query: 118 GANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLE-QNNLGIGAAN 176
ANN + P++ N NL+ L +SN K D + L ++ L+ Q+N+ I
Sbjct: 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLP--DVHKIHSLQKVLLDIQDNINIHTIE 145
Query: 177 DLGFV--TFLT------------------NCSSLKVLSLSDNQFGGELPHSIANLSSTMI 216
FV +F + N + L L+LSDN ELP+ + + +S +
Sbjct: 146 RNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPV 205
Query: 217 VFLIGGNQISGTIPLGIRNLVNLIA 241
+ I +I G+ NL L A
Sbjct: 206 ILDISRTRIHSLPSYGLENLKKLRA 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 75 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 122
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + VH DL NVLL A + DFGL+K L + ++T K V
Sbjct: 123 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 174
Query: 716 GYVAP 720
+ AP
Sbjct: 175 KWYAP 179
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAF--RSFVAECEALRNIRHRNLIKI 594
++IG+GS+G VY E VA+K +N + + + E L ++ +I++
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ----SNDQVEVCKLSLIQRLNIAIDVA 650
+ D D +V E + + L+ + + ++ +L+ N
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN------ 143
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
++H + ++H DLKP+N LL+ D V DFGLA+ ++S
Sbjct: 144 ----FIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MXGTLPYVAP 175
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKG--ILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI 586
+ + + IG GSFG +Y G I +E+ + ++ + K E + + +
Sbjct: 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMM 61
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ I I C + D+ +V E +G SLED + + K SL L +A
Sbjct: 62 QGGVGIPTIRWCGAEG----DYNVMVMELLGP-SLEDLFNFCSR-----KFSLKTVLLLA 111
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAK 691
+ S IEY+H +H D+KP N L+ + ++ DFGLAK
Sbjct: 112 DQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 126
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + VH DL NVLL A + DFGL+K L + ++T K V
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 178
Query: 716 GYVAP 720
+ AP
Sbjct: 179 KWYAP 183
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + +G G++GSV + VAVK ++
Sbjct: 13 QERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 72
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 73 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 123
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 124 ------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 174
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGLA+ T G T Y AP
Sbjct: 175 KILDFGLAR-----------HTDDEMTGYVATRWYRAP 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 28/220 (12%)
Query: 505 SAHNSADTSPMEKQFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKV 564
S H S P E + P Y + T E +G G+FG+V KG +++ V V
Sbjct: 2 SLHESPYADPEEIR-PKEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQMKKVVKTVAV 57
Query: 565 INLKQKG---AFR-SFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGS 620
LK + A + +AE ++ + + ++++I IC + + LV E G
Sbjct: 58 KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGP 111
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
L +L Q+ + + L+ + V+ ++YL + VH DL NVLL
Sbjct: 112 LNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLE---ESNFVHRDLAARNVLLVTQH 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
A + DFGL+K L + ++T K V + AP
Sbjct: 163 YAKISDFGLSKALRADENYYKAQTHG-----KWPVKWYAP 197
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKGI---LGEDEMIVAVKVINLKQKGAFRSFVAECEALRN 585
+ + + IG GSFG +Y G GE+ VA+K+ +K K E + +
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEE---VAIKLECVKTKHP--QLHIESKIYKM 58
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
++ I I C + D+ +V E +G SLED + + K SL L +
Sbjct: 59 MQGGVGIPTIRWCGAEG----DYNVMVMELLGP-SLEDLFNFCSR-----KFSLKTVLLL 108
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAK 691
A + S IEY+H +H D+KP N L+ + ++ DFGLAK
Sbjct: 109 ADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 66 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 166
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 167 -MXGTLPYVAP 176
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 85 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 132
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + VH DL NVLL A + DFGL+K L + ++T K V
Sbjct: 133 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 184
Query: 716 GYVAP 720
+ AP
Sbjct: 185 KWYAP 189
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRNIRH 588
T E+ +G+G+F V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSL-EDWL---HQSNDQVEVCKLSLIQRLN 644
N++++ S F LVF+ + G L ED + + S C +++ +N
Sbjct: 63 PNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 645 IAIDVASAIEYLHHHCQ-PPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHLDT 700
HC +VH DLKP N+LL + DFGLA +
Sbjct: 118 --------------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--- 160
Query: 701 SSKTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 161 -----QAWFGFAGTPGYLSP 175
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ D GLA+ T G T Y AP
Sbjct: 163 ELKILDGGLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 142
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + VH DL NVLL A + DFGL+K L + ++T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 716 GYVAP 720
+ AP
Sbjct: 195 KWYAP 199
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 142
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTV 715
L + VH DL NVLL A + DFGL+K L + ++T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 716 GYVAP 720
+ AP
Sbjct: 195 KWYAP 199
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRNIRH 588
T E+ +G+G+F V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSL-EDWL---HQSNDQVEVCKLSLIQRLN 644
N++++ S F LVF+ + G L ED + + S C +++ +N
Sbjct: 63 PNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 645 IAIDVASAIEYLHHHCQ-PPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKFLSSHHLDT 700
HC +VH DLKP N+LL + DFGLA +
Sbjct: 118 --------------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--- 160
Query: 701 SSKTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 161 -----QAWFGFAGTPGYLSP 175
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V VAVK ++L+++ E +R+ H N++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY---- 108
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
S+ G D +V E++ G+L D V +++ Q + + V A+ YLH+
Sbjct: 109 SSYLVG-DELWVVMEFLEGGAL-------TDIVTHTRMNEEQIATVCLSVLRALSYLHNQ 160
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVA 719
++H D+K ++LL D + DFG S + P + GT ++A
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCA-------QVSKEVPKRKXLV-GTPYWMA 209
Query: 720 P 720
P
Sbjct: 210 P 210
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 517 KQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------ 566
++ P EL+K E + + + +G G++GSV + + VAVK ++
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 567 LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGSLE 622
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 63 IHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL-- 113
Query: 623 DWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 ------NNIVKSQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSEL 164
Query: 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DFGL + T G T Y AP
Sbjct: 165 KILDFGLCR-----------HTDDEMTGYVATRWYRAP 191
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFRSFVAECEALRNIRHRNLIKIIT 596
+G G++GSV VAVK ++ + A R++ E L++++H N+I ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 86
Query: 597 I----CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ S DF V LV MG N+ V+ LS + +
Sbjct: 87 VFTPATSIEDFSEV---YLVTTLMGADL--------NNIVKCQALSDEHVQFLVYQLLRG 135
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++Y+H ++H DLKPSNV ++ D + DFGLA+
Sbjct: 136 LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 437 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 484
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
L + VH DL NVLL A + DFGL+K L +
Sbjct: 485 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFRSFVAECEALRNIRHRNLIKIIT 596
+G G++GSV VAVK ++ + A R++ E L++++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 94
Query: 597 I----CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ S DF V LV MG N+ V+ LS + +
Sbjct: 95 VFTPATSIEDFSEV---YLVTTLMGADL--------NNIVKCQALSDEHVQFLVYQLLRG 143
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++Y+H ++H DLKPSNV ++ D + DFGLA+
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 515 MEKQFPMVSYAELSKATSE----FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN---- 566
M ++ P EL+K E + + + +G G++GSV + VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 567 --LKQKGAFRSFVAECEALRNIRHRNLIKIITICSST----DFKGVDFKALVFEYMGNGS 620
+ K +R E L++++H N+I ++ + + +F V LV MG
Sbjct: 61 SIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDV---YLVTHLMGADL 113
Query: 621 LEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
N+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D
Sbjct: 114 --------NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
+ DF LA+ T G T Y AP
Sbjct: 163 ELKILDFYLAR-----------HTDDEMTGYVATRWYRAP 191
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLIKII 595
+G G+FG+V KG +++ V V LK + A + +AE ++ + + ++++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
IC + + LV E G L +L Q+ + + L+ + V+ ++Y
Sbjct: 438 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKY 485
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
L + VH DL NVLL A + DFGL+K L +
Sbjct: 486 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 522
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 560 VAVKVI--NLKQKGAFR-SFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYM 616
VAVKV+ +L + +F F E + + H ++ + + G +V EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAG-PLPYIVMEYV 98
Query: 617 GNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+L D +H ++ + + + D A+ + H + ++H D+KP+N+++
Sbjct: 99 DGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 677 DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
V DFG+A+ ++ S + + + + GT Y++P
Sbjct: 150 SATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 188
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG---AFRSFVAECEALRNIRHRNLIKIIT 596
+G G++GSV VAVK ++ + A R++ E L++++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 94
Query: 597 I----CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
+ S DF V LV MG N+ V+ LS + +
Sbjct: 95 VFTPATSIEDFSEV---YLVTTLMGADL--------NNIVKSQALSDEHVQFLVYQLLRG 143
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++Y+H ++H DLKPSNV ++ D + DFGLA+
Sbjct: 144 LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 32/196 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN------ 585
+F M+G+GSFG V+ + A+K LK+ EC +
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC-KLSLIQRLN 644
H L + C+ F+ + V EY+ G L ++ C K L +
Sbjct: 76 WEHPFLTHMF--CT---FQTKENLFFVMEYLNGGDL-------MYHIQSCHKFDLSRATF 123
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
A ++ +++LH +V+ DLK N+LLD D + DFG+ K ++ +KT
Sbjct: 124 YAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKT 176
Query: 705 PSSSIGIKGTVGYVAP 720
GT Y+AP
Sbjct: 177 NEFC----GTPDYIAP 188
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F IG GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EYM G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MCGTLPYVAP 175
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F IG GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EYM G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKG--ILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI 586
+ +++ IG GSFG +Y G I +E+ + ++ + K E + + +
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHP----QLHIESKFYKMM 61
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ I I C + D+ +V E +G SLED + + K SL L +A
Sbjct: 62 QGGVGIPSIKWCGAEG----DYNVMVMELLGP-SLEDLFNFCSR-----KFSLKTVLLLA 111
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAK 691
+ S IEY+H +H D+KP N L+ + ++ DFGLAK
Sbjct: 112 DQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 535 SSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKI 594
S + ++G G FG V+K + +A K+I + E + + H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
F+ + LV EY+ G L D + E L+ + + + I
Sbjct: 152 YDA-----FESKNDIVLVMEYVDGGELFDRIID-----ESYNLTELDTILFMKQICEGIR 201
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG--DFGLAK 691
++H Q ++H DLKP N+L + + DFGLA+
Sbjct: 202 HMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 560 VAVKVI--NLKQKGAFR-SFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYM 616
VAVKV+ +L + +F F E + + H ++ + + G +V EY+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG-PLPYIVMEYV 115
Query: 617 GNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+L D +H ++ + + + D A+ + H Q ++H D+KP+N+++
Sbjct: 116 DGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMI 166
Query: 677 DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
V DFG+A+ ++ S + + + + GT Y++P
Sbjct: 167 SATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 205
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 560 VAVKVI--NLKQKGAFR-SFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYM 616
VAVKV+ +L + +F F E + + H ++ + + G +V EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG-PLPYIVMEYV 98
Query: 617 GNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+L D +H ++ + + + D A+ + H + ++H D+KP+N+++
Sbjct: 99 DGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 677 DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAP 720
V DFG+A+ ++ S + + + + GT Y++P
Sbjct: 150 SATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSP 188
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MXGTLPYVAP 175
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
++G+G++G VY G +++ +A+K I + + E ++++H+N+++ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL--- 85
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQS----NDQVEVCKLSLIQRLNIAIDVASAIE 654
F F + E + GSL L D + Q + ++
Sbjct: 86 --GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-------ILEGLK 136
Query: 655 YLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKG 713
YLH + +VH D+K NVL++ + V + DFG +K L+ + T + T G
Sbjct: 137 YLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT--------G 185
Query: 714 TVGYVAP 720
T+ Y+AP
Sbjct: 186 TLQYMAP 192
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MXGTLPYVAP 175
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MXGTLPYVAP 175
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 36/202 (17%)
Query: 513 SPMEKQFPMVSYAELS-KATSEFSSSNMIGQGSFGSV---YKGILGEDEMIVAVKVIN-- 566
S M+ QF V A+ + + IG G+ G V + +LG + VAVK ++
Sbjct: 2 SHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLG---INVAVKKLSRP 58
Query: 567 ----LKQKGAFRSFVAECEALRNIRHRNLIKIITICSS----TDFKGVDFKALVFEYMGN 618
K A+R V L+ + H+N+I ++ + + +F+ V LV E M +
Sbjct: 59 FQNQTHAKRAYRELVL----LKCVNHKNIISLLNVFTPQKTLEEFQDV---YLVMELM-D 110
Query: 619 GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678
+L +H D + L L Q L I++LH ++H DLKPSN+++
Sbjct: 111 ANLCQVIHMELDHERMSYL-LYQML-------CGIKHLH---SAGIIHRDLKPSNIVVKS 159
Query: 679 DMVAHVGDFGLAKFLSSHHLDT 700
D + DFGLA+ S++ + T
Sbjct: 160 DCTLKILDFGLARTASTNFMMT 181
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN 585
E E ++G+G++G VY G +++ +A+K I + + E ++
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQS----NDQVEVCKLSLIQ 641
++H+N+++ + S F + E + GSL L D + Q
Sbjct: 62 LKHKNIVQYLGSFSEN-----GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 116
Query: 642 RLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVGDFGLAKFLSSHHLDT 700
+ ++YLH + +VH D+K NVL++ + V + DFG +K L+ + T
Sbjct: 117 -------ILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 166
Query: 701 SSKTPSSSIGIKGTVGYVAP 720
+ T GT+ Y+AP
Sbjct: 167 ETFT--------GTLQYMAP 178
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 XGTPEYLAP 207
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 534 FSSSNMIGQGSFGSVY--KGILGEDE-MIVAVKVINLKQKGAFRSF--VAECEALRNI-- 586
F ++G+G +G V+ + + G + I A+KV LK+ R+ A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKV--LKKAMIVRNAKDTAHTKAERNILE 76
Query: 587 --RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+H ++ +I F+ L+ EY+ G L L + +E + ++
Sbjct: 77 EVKHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
+A L H Q +++ DLKP N++L+H + DFGL K S H T + T
Sbjct: 132 MA---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHT 180
Query: 705 PSSSIGIKGTVGYVAP 720
GT+ Y+AP
Sbjct: 181 ------FCGTIEYMAP 190
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 AGTPEYLAP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 21/182 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITIC 598
+G+G++G V + E VAVK++++K+ + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ + + L EY G L D + E +L + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+ H D+KP N+LLD + DFGLA ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 719 AP 720
AP
Sbjct: 174 AP 175
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI---LGEDEMIVAVKVINLKQKG--- 571
Q P E + +F + +G G+FG V + LG+++ ++ V V LK
Sbjct: 19 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 572 AFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSN- 629
+ ++E + + ++ +H N++ ++ C+ V + EY G L ++L +
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKAE 131
Query: 630 ----------------DQVEVCKLSLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPS 672
D+ + L L L+ + VA + +L +C +H D+
Sbjct: 132 AMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAAR 187
Query: 673 NVLLDHDMVAHVGDFGLAK 691
NVLL + VA +GDFGLA+
Sbjct: 188 NVLLTNGHVAKIGDFGLAR 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 21/182 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITIC 598
+G+G++G V + E VAVK++++K+ + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
+ + + L EY G L D + E +L + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+ H D+KP N+LLD + DFGLA ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 719 AP 720
AP
Sbjct: 175 AP 176
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 574 RSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE 633
R F+AE + H ++++I TD G +V EY+G SL+ +S Q
Sbjct: 130 RQFLAE------VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQ-- 177
Query: 634 VCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 681
KL + + + +++ A+ YLH +V+ DLKP N++L + +
Sbjct: 178 --KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQL 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 122 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 173
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + ++ +
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGATWTL 219
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 220 CGTPEYLAP 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 532 SEFSSSNMIGQGSFGSVY---KGILGEDEMIVAVKVIN---LKQKGAFRSFVAECEALRN 585
S F ++GQGSFG V+ K + + A+KV+ LK + R+ + E + L +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILAD 86
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
+ H ++K+ F+ L+ +++ G L L + EV + +
Sbjct: 87 VNHPFVVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 136
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
A ++A +++LH +++ DLKP N+LLD + + DFGL+K H
Sbjct: 137 A-ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE-------- 184
Query: 706 SSSIGIKGTVGYVAP 720
+ GTV Y+AP
Sbjct: 185 KKAYSFCGTVEYMAP 199
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 66 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 166
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 167 -MCGTLPYVAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 66 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 166
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 167 -MCGTLPYVAP 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 66 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 166
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 167 -MCGTLPYVAP 176
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 538 NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIIT 596
++ +G F VY+ A+K + ++ R+ + E ++ + H N+++ +
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 597 ICS----STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASA 652
S +D +F L+ + G L ++L + + LS L I A
Sbjct: 94 AASIGKEESDTGQAEF--LLLTELCKGQLVEFLKKMESR---GPLSCDTVLKIFYQTCRA 148
Query: 653 IEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTS 701
++++H +PP++H DLK N+LL + + DFG A + SH+ D S
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI-SHYPDYS 195
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MCGTLPYVAP 175
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MCGTLPYVAP 175
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 66 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 166
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 167 -MCGTLPYVAP 176
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 32/196 (16%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN------ 585
+F M+G+GSFG V+ + A+K LK+ EC +
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVC-KLSLIQRLN 644
H L + C+ F+ + V EY+ G L ++ C K L +
Sbjct: 75 WEHPFLTHMF--CT---FQTKENLFFVMEYLNGGDL-------MYHIQSCHKFDLSRATF 122
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
A ++ +++LH +V+ DLK N+LLD D + DFG+ K ++ +KT
Sbjct: 123 YAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKT 175
Query: 705 PSSSIGIKGTVGYVAP 720
GT Y+AP
Sbjct: 176 NXFC----GTPDYIAP 187
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 64 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 112
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 113 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 164
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 165 -MCGTLPYVAP 174
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MCGTLPYVAP 175
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 22/190 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAPG 721
GT Y+AP
Sbjct: 199 CGTPEYLAPA 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 66 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 166
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 167 -MCGTLPYVAP 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MCGTLPYVAP 175
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 49/193 (25%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVIN---LKQ--KGAFRSFVAECEALRNIRHRNLIKI 594
IGQGS+G V I + I A+K++N ++Q E ++ + H N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSND-----------QVEVC-------- 635
+ ++ + LV E G L D L+ D + ++C
Sbjct: 94 YEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 636 -----------KLSLIQRL----NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680
L +QR NI + SA+ YLH+ + H D+KP N L +
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNK 205
Query: 681 VAHVG--DFGLAK 691
+ DFGL+K
Sbjct: 206 SFEIKLVDFGLSK 218
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+GS G V VAVK+++L+++ E +R+ +H N++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY---- 108
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
+ G + L+ E++ G+L D + Q +L+ Q + V A+ YLH
Sbjct: 109 KSYLVGEELWVLM-EFLQGGALTDIVSQ-------VRLNEEQIATVCEAVLQALAYLHAQ 160
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694
++H D+K ++LL D + DFG +S
Sbjct: 161 G---VIHRDIKSDSILLTLDGRVKLSDFGFCAQIS 192
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 88 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 139
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 140 TFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----------RVKGRTWXL 185
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 186 CGTPEYLAP 194
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MCGTLPYVAP 175
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAF--RSFVAECEALRNI 586
K + ++IG+GS+G VY VA+K +N + + + E L +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ +I++ + D D +V E + + L+ L+ I
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTP------IFLTEQHVKTIL 137
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695
++ +++H + ++H DLKP+N LL+ D + DFGLA+ ++S
Sbjct: 138 YNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINS 183
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 15/153 (9%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG V++ + + K IN + E + + H LI +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL----- 113
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
F+ L+ E++ G L D + E K+S + +N ++++H H
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRI-----AAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVG--DFGLA 690
+VH D+KP N++ + + V DFGLA
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 37/197 (18%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSV-----YKGILGEDEMIVAVKVI----NLK 568
Q P E + F + +G G+FG V Y I + M VAVK++ +L
Sbjct: 11 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 569 QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVF-EYMGNGSLEDWLHQ 627
++ A S + L N H N++ ++ C+ + LV EY G L ++L +
Sbjct: 69 EREALMSELKVLSYLGN--HMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRR 120
Query: 628 SNDQVEVCKLS------------LIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNV 674
D K S L L+ + VA + +L +C +H DL N+
Sbjct: 121 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNI 176
Query: 675 LLDHDMVAHVGDFGLAK 691
LL H + + DFGLA+
Sbjct: 177 LLTHGRITKICDFGLAR 193
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 36/199 (18%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V K +I+A K+I+L+ K A R+ + IR
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQI--------IRE--- 64
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE----EILGKVS 120
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
IA V + YL Q ++H D+KPSN+L++ + DFG +S +D+ + +
Sbjct: 121 IA--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS 172
Query: 705 PSSSIGIKGTVGYVAPGKF 723
GT Y+AP +
Sbjct: 173 ------FVGTRSYMAPERL 185
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 33/194 (17%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGI---LGEDEMIVAVKVINLKQKG--- 571
Q P E + +F + +G G+FG V + LG+++ ++ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 572 AFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQ--- 627
+ ++E + + ++ +H N++ ++ C+ V + EY G L ++L +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV-----ITEYCCYGDLLNFLRRKRP 146
Query: 628 ---------SNDQVEVCKLSLIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNVLLD 677
S++ E +LS L+ + VA + +L +C +H D+ NVLL
Sbjct: 147 PGLEYSYNPSHNPEE--QLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLT 200
Query: 678 HDMVAHVGDFGLAK 691
+ VA +GDFGLA+
Sbjct: 201 NGHVAKIGDFGLAR 214
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR-----NLIKI 594
+G G F +V+ + + VA+KV+ + + + E L+++R+ N +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-ETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 595 ITICSSTDFKGVD--FKALVFEYMGNGSLEDWLHQSNDQ--VEVCKLSLIQRLNIAIDVA 650
+ + GV+ +VFE +G+ L+ W+ +SN Q C +IQ+ V
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGHHLLK-WIIKSNYQGLPLPCVKKIIQQ------VL 140
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLL 676
++YLH C+ ++H D+KP N+LL
Sbjct: 141 QGLDYLHTKCR--IIHTDIKPENILL 164
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 37/199 (18%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSV-----YKGILGEDEMIVAVKVI----NLK 568
Q P E + F + +G G+FG V Y I + M VAVK++ +L
Sbjct: 34 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 569 QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVF-EYMGNGSLEDWLHQ 627
++ A S + L N H N++ ++ C+ + LV EY G L ++L +
Sbjct: 92 EREALMSELKVLSYLGN--HMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRR 143
Query: 628 SNDQVEVCKLS------------LIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNV 674
D K S L L+ + VA + +L +C +H DL N+
Sbjct: 144 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNI 199
Query: 675 LLDHDMVAHVGDFGLAKFL 693
LL H + + DFGLA+ +
Sbjct: 200 LLTHGRITKICDFGLARHI 218
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 37/197 (18%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSV-----YKGILGEDEMIVAVKVI----NLK 568
Q P E + F + +G G+FG V Y I + M VAVK++ +L
Sbjct: 34 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 569 QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVF-EYMGNGSLEDWLHQ 627
++ A S + L N H N++ ++ C+ + LV EY G L ++L +
Sbjct: 92 EREALMSELKVLSYLGN--HMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRR 143
Query: 628 SNDQVEVCKLS------------LIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNV 674
D K S L L+ + VA + +L +C +H DL N+
Sbjct: 144 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNI 199
Query: 675 LLDHDMVAHVGDFGLAK 691
LL H + + DFGLA+
Sbjct: 200 LLTHGRITKICDFGLAR 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F IG GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 37/197 (18%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSV-----YKGILGEDEMIVAVKVI----NLK 568
Q P E + F + +G G+FG V Y I + M VAVK++ +L
Sbjct: 27 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 84
Query: 569 QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVF-EYMGNGSLEDWLHQ 627
++ A S + L N H N++ ++ C+ + LV EY G L ++L +
Sbjct: 85 EREALMSELKVLSYLGN--HMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRR 136
Query: 628 SNDQVEVCKLS------------LIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNV 674
D K S L L+ + VA + +L +C +H DL N+
Sbjct: 137 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNI 192
Query: 675 LLDHDMVAHVGDFGLAK 691
LL H + + DFGLA+
Sbjct: 193 LLTHGRITKICDFGLAR 209
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 37/197 (18%)
Query: 518 QFPMVSYAELSKATSEFSSSNMIGQGSFGSV-----YKGILGEDEMIVAVKVI----NLK 568
Q P E + F + +G G+FG V Y I + M VAVK++ +L
Sbjct: 29 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 569 QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVF-EYMGNGSLEDWLHQ 627
++ A S + L N H N++ ++ C+ + LV EY G L ++L +
Sbjct: 87 EREALMSELKVLSYLGN--HMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRR 138
Query: 628 SNDQVEVCKLS------------LIQRLNIAIDVASAIEYL-HHHCQPPMVHGDLKPSNV 674
D K S L L+ + VA + +L +C +H DL N+
Sbjct: 139 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNI 194
Query: 675 LLDHDMVAHVGDFGLAK 691
LL H + + DFGLA+
Sbjct: 195 LLTHGRITKICDFGLAR 211
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEYS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 17/142 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
+G G+FG V +++ AVKV+ N+K+ RS E + L+ I++ ++ +
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT--RSAKIEADILKKIQNDDINNNNIVK 100
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSND---QVEVCKLSLIQRLNIAIDVASAIEY 655
F D L+FE +G SL + + ++N +E KL I++ A+ Y
Sbjct: 101 YHGKFMYYDHMCLIFEPLG-PSLYEIITRNNYNGFHIEDIKL-------YCIEILKALNY 152
Query: 656 LHHHCQPPMVHGDLKPSNVLLD 677
L + + H DLKP N+LLD
Sbjct: 153 LR---KMSLTHTDLKPENILLD 171
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G+G++G V K I AVK I R+ V E R + ++ C
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI--------RATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 600 ST-DFKGVDFK---ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655
T F G F+ + + + SL+ + Q D+ + ++ + IA+ + A+E+
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 151
Query: 656 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
LH ++H D+KPSNVL++ DFG++ +L
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL 187
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
++ +G+G + V++ I + V VK++ +K + E + L N+R
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLR--GG 91
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
IIT+ ALVFE++ N + L+Q+ ++ R + ++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDI-------RFYM-YEILK 142
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVGDFGLAKF 692
A++Y H ++H D+KP NV++DH+ + D+GLA+F
Sbjct: 143 ALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 27/167 (16%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--------AFRSFVAECEALRNIRHRNL 591
IG G FG +Y A V+ ++ + F VA+ + ++ R
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104
Query: 592 IKIITI-----CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
+ + I T+FKG ++ +V E +G L + + Q K S + L +
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERLGID-----LQKISGQNGTFKKSTV--LQLG 157
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVGDFGLA 690
I + +EY+H + VHGD+K +N+LL + D V ++ D+GL+
Sbjct: 158 IRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV-YLADYGLS 200
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEYS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEYS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 611 LVFEYMGNGSL--EDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGD 668
+++EYM N S+ D D+ C + + I V ++ Y+H+ + + H D
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRD 177
Query: 669 LKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723
+KPSN+L+D + + DFG ++++ + G +GT ++ P F
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIK----------GSRGTYEFMPPEFF 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPAFVAP 186
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR-----NLIKI 594
+G G F +V+ + + VA+KV+ + + + E L+++R+ N +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-ETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 595 ITICSSTDFKGVD--FKALVFEYMGNGSLEDWLHQSNDQ--VEVCKLSLIQRLNIAIDVA 650
+ + GV+ +VFE +G+ L+ W+ +SN Q C +IQ+ V
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLK-WIIKSNYQGLPLPCVKKIIQQ------VL 156
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLL 676
++YLH C+ ++H D+KP N+LL
Sbjct: 157 QGLDYLHTKCR--IIHTDIKPENILL 180
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 94 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 145
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 191
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 192 CGTPEYLAP 200
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEM----IV 560
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV 60
Query: 561 AVKVINLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEY 615
AVK++ ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 61 AVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 113
Query: 616 MGNGSLEDWLHQSNDQVEVCK------LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDL 669
G+L +L ++ K L+L + + VA +E+L +H DL
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 670 KPSNVLLDHDMVAHVGDFGLAK 691
N+LL V + DFGLA+
Sbjct: 171 AARNILLSEKNVVKIXDFGLAR 192
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLIKIITI 597
+G+G+F V + + A K+IN K+ A + E R ++H N++++
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH-- 87
Query: 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH 657
S +G + L+F+ + G L + + E IQ++ A+ LH
Sbjct: 88 -DSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--------LH 136
Query: 658 HHCQPPMVHGDLKPSNVLLDHDM---VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGT 714
H Q +VH DLKP N+LL + + DFGLA + + G GT
Sbjct: 137 CH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--------QAWFGFAGT 187
Query: 715 VGYVAP 720
GY++P
Sbjct: 188 PGYLSP 193
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 118/292 (40%), Gaps = 40/292 (13%)
Query: 8 EIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLN 67
E S L+ L L N ++ P NL L+ + ++ N L L NL +L+
Sbjct: 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110
Query: 68 VAENKFYGMFP---RSICNISSLEY-----FYLTSNRFSG---------------SLPFD 104
++ENK + + + N+ SLE Y++ FSG S+P +
Sbjct: 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170
Query: 105 IVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLN 164
+ +L L L + N + S L++L++S+ + +D + L+ LN
Sbjct: 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY-----LDTMTPNCLYGLN 225
Query: 165 LEQNNLGIGAANDLGFVTFLT--NCSSLKVLSLSDNQFG---GELPHSIANLSSTMIVFL 219
L +L I N L V +L + L+ L+LS N G + H + L +V
Sbjct: 226 L--TSLSITHCN-LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV-- 280
Query: 220 IGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKN 271
G Q++ P R L L L V NQL V + NL+ L L N
Sbjct: 281 --GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119
LRNL+ L+++ F +SSLE + N F + DI L NL L +
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 120 NNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168
L P + ++ S+L++L++++NQ K F L L ++ L N
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 49/234 (20%)
Query: 74 YGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGAN--NFFGLIPDSLS 131
+G FP + SL+ TSN+ + V+LP+L+ L + N +F G S
Sbjct: 316 FGQFP--TLKLKSLKRLTFTSNKGGNAFS---EVDLPSLEFLDLSRNGLSFKGCCSQSDF 370
Query: 132 NASNLELLDLSNNQFKGKVSI--DFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSS 189
++L+ LDLS F G +++ +F L+ L L+ + +NL + F FL+ +
Sbjct: 371 GTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSE----FSVFLS-LRN 422
Query: 190 LKVLSLSDNQ----FGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVE 245
L L +S F G I N S++ V + GN
Sbjct: 423 LIYLDISHTHTRVAFNG-----IFNGLSSLEVLKMAGNSFQENF---------------- 461
Query: 246 VNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG 299
+PD+ EL+NL L L + L+ P+ +L+ L L++ SN L+
Sbjct: 462 -------LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+A+ + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 98 GLSSLQKLVAVETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 155 DLSSNKIQS 163
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 15 LQALALAGN-YLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKF 73
L+ L +AGN + LPD L L + + L PT L +L LN+A N+
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506
Query: 74 Y----GMFPRSICNISSLEYFYLTSNRFSGSLP 102
G+F R ++SL+ +L +N + S P
Sbjct: 507 KSVPDGIFDR----LTSLQKIWLHTNPWDCSCP 535
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 175
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + + A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFAEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 122 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 173
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 219
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 220 CGTPEYLAP 228
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 6 PKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQ 65
P L +L L L L P L+ALQ ++++ N+L T L NL
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 66 LNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGL 125
L + N+ + R+ + SL+ L NR + P +L L L + ANN L
Sbjct: 157 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH-AFRDLGRLMTLYLFANNLSAL 215
Query: 126 IPDSLSNASNLELLDLSNNQF 146
++L+ L+ L L++N +
Sbjct: 216 PTEALAPLRALQYLRLNDNPW 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+++D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G+G++G V K I+AVK I R+ V E R + ++ C
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 600 ST-DFKGVDFKA----LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
T F G F+ + E M + SL+ + Q D+ + ++ + IA+ + A+E
Sbjct: 67 FTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 123
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693
+LH ++H D+KPSNVL++ + DFG++ +L
Sbjct: 124 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL 160
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 11/160 (6%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
EYLH +++ DLKP N+L+D V DFG AK
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 534 FSSSNMIGQGSFGSVY--KGILGEDE-MIVAVKVINLKQKGAFRSF--VAECEALRNI-- 586
F ++G+G +G V+ + + G + I A+KV LK+ R+ A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKV--LKKAMIVRNAKDTAHTKAERNILE 76
Query: 587 --RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+H ++ +I F+ L+ EY+ G L L + +E + ++
Sbjct: 77 EVKHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
+A L H Q +++ DLKP N++L+H + DFGL K S H T +
Sbjct: 132 MA---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHX 180
Query: 705 PSSSIGIKGTVGYVAP 720
GT+ Y+AP
Sbjct: 181 ------FCGTIEYMAP 190
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 540 IGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAFRSFVA-ECEALRNIRHRNLI-KIIT 596
+G+G+FG V + + + VA+K+I + G +R E L+ I+ ++ K +
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKII--RNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ S F + FE +G + E +L ++N Q L ++A + A+ +L
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNTFE-FLKENNFQ----PYPLPHVRHMAYQLCHALRFL 139
Query: 657 HHHCQPPMVHGDLKPSNVLL----------DHDMVA---------HVGDFGLAKFLSSHH 697
H + + H DLKP N+L +H V DFG A F HH
Sbjct: 140 H---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 196
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
+ + +G+ P
Sbjct: 197 TTIVATRHYRPPEVILELGWAQP 219
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 31/191 (16%)
Query: 111 NLKELGIGANNFFGLI-PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNN 169
N+K L I F ++ P S S+ L+ + N F V S+LK L L L++N
Sbjct: 332 NIKMLSISDTPFIHMVCPPS---PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRN- 387
Query: 170 LGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGT- 228
G N N SSL+ L +S N + +++V + N ++G+
Sbjct: 388 ---GLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444
Query: 229 --------------------IPLGIRNLVNLIALAVEVNQLHGTIPD-VIGELKNLQLLG 267
IP + +L L L V NQL ++PD V L +LQ +
Sbjct: 445 FRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQL-KSVPDGVFDRLTSLQYIW 503
Query: 268 LYKNFLQGSIP 278
L+ N + P
Sbjct: 504 LHDNPWDCTCP 514
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
Query: 17 ALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFY-- 74
L L+ N LTG + F ++V+ + N + P + L+ L +LNVA N+
Sbjct: 432 VLNLSSNMLTGSV--FRCLPPKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSV 488
Query: 75 --GMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDS 129
G+F R ++SL+Y +L N P+D P ++ L N G++ +S
Sbjct: 489 PDGVFDR----LTSLQYIWLHDN------PWDCTC--PGIRYLSEWINKHSGVVRNS 533
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA----L 583
K + ++IG+GSFG V K ++ VA+K+I K K AF + A+ E L
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLN-QAQIEVRLLEL 106
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
N +H +K + F + LVFE M + +L D L +N L+L ++
Sbjct: 107 MN-KHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN--FRGVSLNLTRKF 162
Query: 644 NIAIDVASAIEYLHHHCQPPM--VHGDLKPSNVLL 676
A + +A+ +L P + +H DLKP N+LL
Sbjct: 163 --AQQMCTALLFL---ATPELSIIHCDLKPENILL 192
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA----L 583
K + ++IG+GSFG V K ++ VA+K+I K K AF + A+ E L
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLN-QAQIEVRLLEL 106
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
N +H +K + F + LVFE M + +L D L +N L+L ++
Sbjct: 107 MN-KHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN--FRGVSLNLTRKF 162
Query: 644 NIAIDVASAIEYLHHHCQPPM--VHGDLKPSNVLL 676
A + +A+ +L P + +H DLKP N+LL
Sbjct: 163 --AQQMCTALLFL---ATPELSIIHCDLKPENILL 192
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G++G V + E VAVK++++K+ + E + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 66 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 166
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 167 -MCGTLPYVAP 176
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 6 PKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQ 65
P L +L L L L P L+ALQ ++++ N+L T L NL
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 66 LNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGL 125
L + N+ + R+ + SL+ L NR + P +L L L + ANN L
Sbjct: 158 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH-AFRDLGRLMTLYLFANNLSAL 216
Query: 126 IPDSLSNASNLELLDLSNNQF 146
++L+ L+ L L++N +
Sbjct: 217 PTEALAPLRALQYLRLNDNPW 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTP 94
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 95 QKTLEEFQDV---YLVMELM-DANLXQVIQMELDHERMSYL-LYQML-------XGIKHL 142
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
IG+G++GSV K + I+AVK I RS V E E + + +++ + C
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI--------RSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 600 S-TDFKGVDFKA----LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIE 654
F G F+ + E M + + + + +V ++ ++ +A A+
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA--TVKALN 139
Query: 655 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGT 714
+L + + ++H D+KPSN+LLD + DFG +S +D+ +KT + G
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFG----ISGQLVDSIAKTRDA-----GC 188
Query: 715 VGYVAPGK 722
Y+AP +
Sbjct: 189 RPYMAPER 196
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVIN------LKQKGAFRSFVAECEALRNIRHRNLIKI 594
QG + + +LG + VAVK ++ K A+R V L+ + H+N+I +
Sbjct: 36 AQGIVCAAFDTVLG---INVAVKKLSRPFQNQTHAKRAYRELVL----LKCVNHKNIISL 88
Query: 595 ITICSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
+ + + +F+ V LV E M + +L +H D + L L Q L
Sbjct: 89 LNVFTPQKTLEEFQDV---YLVMELM-DANLCQVIHMELDHERMSYL-LYQML------- 136
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA----L 583
K + ++IG+GSFG V K ++ VA+K+I K K AF + A+ E L
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLN-QAQIEVRLLEL 87
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
N +H +K + F + LVFE M + +L D L +N L+L ++
Sbjct: 88 MN-KHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN--FRGVSLNLTRKF 143
Query: 644 NIAIDVASAIEYLHHHCQPPM--VHGDLKPSNVLL 676
A + +A+ +L P + +H DLKP N+LL
Sbjct: 144 --AQQMCTALLFL---ATPELSIIHCDLKPENILL 173
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 87 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 138
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 139 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWTL 184
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 185 CGTPEYLAP 193
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 540 IGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAFRSFVA-ECEALRNIRHRNLI-KIIT 596
+G+G+FG V + + + VA+K+I + G +R E L+ I+ ++ K +
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKII--RNVGKYREAARLEINVLKKIKEKDKENKFLC 93
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ S F + FE +G + E +L ++N Q L ++A + A+ +L
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNTFE-FLKENNFQ----PYPLPHVRHMAYQLCHALRFL 148
Query: 657 HHHCQPPMVHGDLKPSNVLL----------DHDMVA---------HVGDFGLAKFLSSHH 697
H + + H DLKP N+L +H V DFG A F HH
Sbjct: 149 H---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 205
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
+ + +G+ P
Sbjct: 206 TTIVATRHYRPPEVILELGWAQP 228
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 540 IGQGSFGSVYKGI-LGEDEMIVAVKVINLKQKGAFRSFVA-ECEALRNIRHRNLI-KIIT 596
+G+G+FG V + + + VA+K+I + G +R E L+ I+ ++ K +
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKII--RNVGKYREAARLEINVLKKIKEKDKENKFLC 116
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ S F + FE +G + E +L ++N Q L ++A + A+ +L
Sbjct: 117 VLMSDWFNFHGHMCIAFELLGKNTFE-FLKENNFQ----PYPLPHVRHMAYQLCHALRFL 171
Query: 657 HHHCQPPMVHGDLKPSNVLL----------DHDMVA---------HVGDFGLAKFLSSHH 697
H + + H DLKP N+L +H V DFG A F HH
Sbjct: 172 H---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH 228
Query: 698 LDTSSKTPSSSIGIKGTVGYVAP 720
+ + +G+ P
Sbjct: 229 TTIVATRHYRPPEVILELGWAQP 251
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN--------L 591
+G G F +V+ + + VA+KV+ Q + + E + L+ +R + +
Sbjct: 39 LGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYT-ETALDEIKLLKCVRESDPSDPNKDMV 97
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ--VEVCKLSLIQRLNIAIDV 649
+++I + G+ +VFE +G+ L+ W+ +SN Q C S+I++ V
Sbjct: 98 VQLIDDFKISGMNGIHV-CMVFEVLGHHLLK-WIIKSNYQGLPVRCVKSIIRQ------V 149
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLL 676
++YLH C+ ++H D+KP N+L+
Sbjct: 150 LQGLDYLHSKCK--IIHTDIKPENILM 174
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 507 HNSADTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEMIV 560
H D P+++ + Y + EF + +G+G+FG V + G D+
Sbjct: 1 HMDPDELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTAT 57
Query: 561 AVKV-INLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFE 614
V + + ++GA R+ ++E + L +I H N++ ++ C+ G +V E
Sbjct: 58 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 113
Query: 615 YMGNGSLEDWLHQSNDQVEVCK---------LSLIQRLNIAIDVASAIEYLHHHCQPPMV 665
+ G+L +L ++ K L+L + + VA +E+L +
Sbjct: 114 FCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 666 HGDLKPSNVLLDHDMVAHVGDFGLAK 691
H DL N+LL V + DFGLA+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTP 94
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 95 QKTLEEFQDV---YLVMELM-DANLXQVIQMELDHERMSYL-LYQML-------CGIKHL 142
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 72 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 121
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 122 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 171
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 172 EFKN----IFGTPEFVAP 185
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 72 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 121
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 122 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 171
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 172 EFKN----IFGTPEFVAP 185
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFXEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWTL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 96 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFXEPHARFYAAQIVL 147
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 148 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 193
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 194 CGTPEYLAP 202
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFXEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 122 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFXEPHARFYAAQIVL 173
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 219
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 220 CGTPEYLAP 228
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCK--LSLIQRLNIAIDVASAIEYLHHHCQPPMV 665
+ A+V E +G SLED ++C SL L IAI + S +EY+H ++
Sbjct: 79 YNAMVLELLGP-SLEDLF-------DLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LI 127
Query: 666 HGDLKPSNVLLDH-----DMVAHVGDFGLAKFLSSHHLDTSSK 703
+ D+KP N L+ V H+ DFGLAK ++D +K
Sbjct: 128 YRDVKPENFLIGRPGNKTQQVIHIIDFGLAK----EYIDPETK 166
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+++D V DFGLAK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
A ++ +E LH +V+ DLKP N+LLD + D GLA +
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-------- 340
Query: 706 SSSIGIKGTVGYVAP 720
+ G GTVGY+AP
Sbjct: 341 -TIKGRVGTVGYMAP 354
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVAGGEMFSHLRR------IGRFXEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE---L 117
Query: 593 KIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
+++ C+S F G + ++ E+M GSL+ L ++ E ++ +++I
Sbjct: 118 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 173
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 174 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
A ++ +E LH +V+ DLKP N+LLD + D GLA +
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-------- 340
Query: 706 SSSIGIKGTVGYVAP 720
+ G GTVGY+AP
Sbjct: 341 -TIKGRVGTVGYMAP 354
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEM----IV 560
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV 60
Query: 561 AVKVINLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEY 615
AVK++ ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 61 AVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 113
Query: 616 MGNGSLEDWLHQSNDQVEVCK------LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDL 669
G+L +L ++ K L+L + + VA +E+L +H DL
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 670 KPSNVLLDHDMVAHVGDFGLAK 691
N+LL V + DFGLA+
Sbjct: 171 AARNILLSEKNVVKICDFGLAR 192
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 21/191 (10%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHR 589
++ +G+G+ G V + E VAVK++++K+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K + + + L EY G L D + E +L
Sbjct: 65 NVVKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 113
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSI 709
+ + YLH + H D+KP N+LLD + DFGLA ++ +
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK----- 165
Query: 710 GIKGTVGYVAP 720
+ GT+ YVAP
Sbjct: 166 -MCGTLPYVAP 175
>pdb|3OGK|B Chain B, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|D Chain D, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|F Chain F, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|H Chain H, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|J Chain J, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|L Chain L, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|N Chain N, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGK|P Chain P, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
pdb|3OGL|B Chain B, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|D Chain D, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|F Chain F, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|H Chain H, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|J Chain J, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|L Chain L, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|N Chain N, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGL|P Chain P, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
pdb|3OGM|B Chain B, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|D Chain D, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|F Chain F, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|H Chain H, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|J Chain J, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|L Chain L, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|N Chain N, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
pdb|3OGM|P Chain P, Structure Of Coi1-Ask1 In Complex With Coronatine And The
Jaz1 Degron
Length = 592
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 49/220 (22%)
Query: 90 FYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGK 149
+ T +R S P NL +LK G F LIP++ + ++SNN + K
Sbjct: 61 YTATPDRLSRRFP-----NLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115
Query: 150 VSIDFSSLKILWRLNLEQNNLGIGAANDL--------------GFVTFLTNCSSLKVLSL 195
S+ F + + +L+ + L A+DL G ++ +T+C +K L +
Sbjct: 116 -SVHFRRMIV---SDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLM 171
Query: 196 SDNQFG---GELPHSIANLSSTMIVFLIGGNQISGTIPLGI----RNLVNLIALAVEVNQ 248
++ F G+ H +A ++++ V + + P + RN +L+++ V
Sbjct: 172 EESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKV---- 227
Query: 249 LHGTIPDVIGELKNLQLLGLYK------NFLQGSIPSGLG 282
G+ + L+L+G +K F GS+ +G
Sbjct: 228 ---------GDFEILELVGFFKAAANLEEFCGGSLNEDIG 258
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHG 667
+ A+V E +G SLED L D+ K L+ IAI + S +EY+H +++
Sbjct: 71 YNAMVLELLGP-SLED-LFDLCDRTFTLKTVLM----IAIQLLSRMEYVHSKN---LIYR 121
Query: 668 DLKPSNVLL-----DHDMVAHVGDFGLAKFLSSHHLDTSSK 703
D+KP N L+ + V H+ DFGLAK ++D +K
Sbjct: 122 DVKPENFLIGRQGNKKEHVIHIIDFGLAK----EYIDPETK 158
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 94
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 95 QKTLEEFQDV---YLVMELM-DANLXQVIQMELDHERMSYL-LYQML-------XGIKHL 142
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA--FRSFVAECEALRN 585
++ T E+ +G+G+F V + + A +IN K+ A + E R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 586 IRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
++H N++++ S +G + L+F+ + G L + + E IQ++
Sbjct: 67 LKHPNIVRL---HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 121
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVGDFGLAKFLSSHHLDTSS 702
A+ LH H Q +VH +LKP N+LL + + DFGLA +
Sbjct: 122 AV--------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ----- 167
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ G GT GY++P
Sbjct: 168 ---QAWFGFAGTPGYLSP 182
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMI-----VAVKV-----------INLKQKGAF 573
A E+ IGQG FG +Y + E + VKV + Q+ A
Sbjct: 33 AKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 574 RSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE 633
+ + R +++ + K D G ++ ++ + G+ + ++++N +
Sbjct: 93 PEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRFGSDLQK--IYEANAK-- 147
Query: 634 VCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVGDFGLA 690
+ S L +++ + +EY+H H VHGD+K SN+LL++ D V ++ D+GLA
Sbjct: 148 --RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 29 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 87
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 88 QKTLEEFQDV---YLVMELM-DANLXQVIQMELDHERMSYL-LYQML-------XGIKHL 135
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+++D V DFGLAK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 23/170 (13%)
Query: 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL-RNIRHR 589
T + IG GS+ + I M AVK+I+ + R E E L R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHP 76
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N+I + + + + +V E M G L D + + S + + +
Sbjct: 77 NIITLKDV-----YDDGKYVYVVTELMKGGELLDKILRQK------FFSEREASAVLFTI 125
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHD----MVAHVGDFGLAKFLSS 695
+EYLH +VH DLKPSN+L + + DFG AK L +
Sbjct: 126 TKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
Query: 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMI-----VAVKV-----------INLKQKGAF 573
A E+ IGQG FG +Y + E + VKV + Q+ A
Sbjct: 33 AKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 574 RSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE 633
+ + R +++ + K D G ++ ++ + G+ + ++++N +
Sbjct: 93 PEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRFGSDLQK--IYEANAK-- 147
Query: 634 VCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVGDFGLA 690
+ S L +++ + +EY+H H VHGD+K SN+LL++ D V ++ D+GLA
Sbjct: 148 --RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE--- 54
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
IA V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 111 IA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILILELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 94 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFXEPHARFYAAQIVL 145
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 191
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 192 CGTPEYLAP 200
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 36/199 (18%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE--- 81
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 137
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
IA V + YL + ++H D+KPSN+L++ + DFG +S +D+ + +
Sbjct: 138 IA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS 189
Query: 705 PSSSIGIKGTVGYVAPGKF 723
GT Y++P +
Sbjct: 190 ------FVGTRSYMSPERL 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE--- 54
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
IA V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 111 IA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEM----IV 560
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 6 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTV 62
Query: 561 AVKVINLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEY 615
AVK++ ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 63 AVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 115
Query: 616 MGNGSLEDWLHQSNDQVEVCK--------LSLIQRLNIAIDVASAIEYLHHHCQPPMVHG 667
G+L +L ++ K L+L + + VA +E+L +H
Sbjct: 116 CKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHR 172
Query: 668 DLKPSNVLLDHDMVAHVGDFGLAK 691
DL N+LL V + DFGLA+
Sbjct: 173 DLAARNILLSEKNVVKICDFGLAR 196
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 36/199 (18%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE--- 54
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
IA V + YL + ++H D+KPSN+L++ + DFG +S +D+ + +
Sbjct: 111 IA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS 162
Query: 705 PSSSIGIKGTVGYVAPGKF 723
GT Y++P +
Sbjct: 163 ------FVGTRSYMSPERL 175
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 36/199 (18%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE--- 54
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
IA V + YL + ++H D+KPSN+L++ + DFG +S +D+ + +
Sbjct: 111 IA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS 162
Query: 705 PSSSIGIKGTVGYVAPGKF 723
GT Y++P +
Sbjct: 163 ------FVGTRSYMSPERL 175
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 36/199 (18%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE--- 54
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKT 704
IA V + YL + ++H D+KPSN+L++ + DFG +S +D+ + +
Sbjct: 111 IA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS 162
Query: 705 PSSSIGIKGTVGYVAPGKF 723
GT Y++P +
Sbjct: 163 ------FVGTRSYMSPERL 175
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 40/198 (20%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ KQK L+ I H
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILD-KQK---------VVKLKQIEH--- 88
Query: 592 IKIITICSSTDFKGVDFKALV---FEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN---- 644
T+ + V+F LV F + N +L L + L I R +
Sbjct: 89 ----TLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHA 144
Query: 645 --IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
A + EYLH +++ DLKP N+L+D V DFG AK
Sbjct: 145 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----------- 190
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + + GT Y+AP
Sbjct: 191 RVKGRTWXLCGTPEYLAP 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE--- 57
Query: 592 IKIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
++++ C+S F G + ++ E+M GSL+ L ++ E ++ +++
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 113
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
IA V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 114 IA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTP 94
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 95 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 142
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 23/161 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL-RNIRHRNLIKIITIC 598
IG GS+ + + M AVKVI+ + R E E L R +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK----RDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
D K V LV E M G L D + + S + + + +EYLH
Sbjct: 91 D--DGKHV---YLVTELMRGGELLDKILRQK------FFSEREASFVLHTIGKTVEYLHS 139
Query: 659 HCQPPMVHGDLKPSNVLLDHD----MVAHVGDFGLAKFLSS 695
+VH DLKPSN+L + + DFG AK L +
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 38 ALQVIHIKGNSLGG--KFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSN 95
+LQ + ++ N L K TL L+NL +++++N F+ M P + ++Y L+S
Sbjct: 362 SLQTLILRQNHLASLEKTGETLLTLKNLTNIDISKNSFHSM-PETCQWPEKMKYLNLSST 420
Query: 96 RF---SGSLPFDIVV-------------NLPNLKELGIGANNFFGLIPDSLSNASNLELL 139
R +G +P + + NLP LKEL I N L PD+ S L +L
Sbjct: 421 RIHSVTGCIPKTLEILDVSNNNLNLFSLNLPQLKELYISRNKLMTL-PDA-SLLPMLLVL 478
Query: 140 DLSNNQFKGKVSIDFSSLKILWRLNLEQN 168
+S NQ K F L L ++ L N
Sbjct: 479 KISRNQLKSVPDGIFDRLTSLQKIWLHTN 507
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 344 LKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFH---GIIPPSLGFL 392
LKNL +DIS N F M P T ++Y+++SS H G IP +L L
Sbjct: 386 LKNLTNIDISKNSFHSM-PETCQWPEKMKYLNLSSTRIHSVTGCIPKTLEIL 436
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 350 LDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSG 407
LD+S+N+ + + L CV+L+ + ++SN + I S L S++ LD+S N S
Sbjct: 31 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSN 88
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLI 592
+F + +G G+ G V+K +++A K+I+L+ K A R+ + IR +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE---L 74
Query: 593 KIITICSS---TDFKGVDFK----ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNI 645
+++ C+S F G + ++ E+M GSL+ L ++ E ++ +++I
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 130
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690
A V + YL + ++H D+KPSN+L++ + DFG++
Sbjct: 131 A--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 35/204 (17%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECE 581
S + +G G F V K A K I ++ + R V+ E
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 582 ALRNIRHRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLI 640
LR IRH N+I + I + TD L+ E + G L D+L + E +
Sbjct: 61 ILREIRHPNIITLHDIFENKTDV------VLILELVSGGELFDFLAEKESLTEDEATQFL 114
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH----VGDFGLAKFLSSH 696
++ + + YLH + H DLKP N++L V + + DFG+A H
Sbjct: 115 KQ------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----H 160
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAP 720
++ ++ + I GT +VAP
Sbjct: 161 KIEAGNEFKN----IFGTPEFVAP 180
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 85 SSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNN 144
+S + +L NR S +P + NL L + +N G+ + + + LE LDLS+N
Sbjct: 31 ASSQRIFLHGNRIS-YVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDN 89
Query: 145 -QFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGE 203
Q + F L L L+L++ L +LG F ++L+ L L DN
Sbjct: 90 AQLRVVDPTTFRGLGHLHTLHLDRCGL-----QELGPGLF-RGLAALQYLYLQDNNLQAL 143
Query: 204 LPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNL 263
++ +L + +FL GN+I R L +L L + N + P +L L
Sbjct: 144 PDNTFRDLGNLTHLFL-HGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRL 202
Query: 264 QLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSN 295
L L+ N L L L L L L N
Sbjct: 203 MTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 8/191 (4%)
Query: 11 SLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNS-LGGKFPTTLGLLRNLVQLNVA 69
S L L L N L G L+ L+ + + N+ L PTT L +L L++
Sbjct: 53 SCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLD 112
Query: 70 ENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDS 129
+ P +++L+Y YL N +LP + +L NL L + N + +
Sbjct: 113 RCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLTHLFLHGNRIPSVPEHA 171
Query: 130 LSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSS 189
+L+ L L N F L L L L NNL + A L S
Sbjct: 172 FRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAE------VLVPLRS 225
Query: 190 LKVLSLSDNQF 200
L+ L L+DN +
Sbjct: 226 LQYLRLNDNPW 236
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 23/161 (14%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL-RNIRHRNLIKIITIC 598
IG GS+ + + M AVKVI+ + R E E L R +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK----RDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
D K V LV E M G L D + + S + + + +EYLH
Sbjct: 91 D--DGKHV---YLVTELMRGGELLDKILRQK------FFSEREASFVLHTIGKTVEYLHS 139
Query: 659 HCQPPMVHGDLKPSNVLLDHD----MVAHVGDFGLAKFLSS 695
+VH DLKPSN+L + + DFG AK L +
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 204 LPHSIANLSSTMIVFLIGGNQISGTIPLGIRN-LVNLIALAVEVNQLHGTIPDVIGELKN 262
LP+ + + +++ +GGN++ ++P G+ N L +L L + NQL V +L
Sbjct: 43 LPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQ 101
Query: 263 LQLLGLYKNFLQGSIPSGL-GNLTKLAKLDLGSNSLQ 298
L+ L L N LQ S+P G+ LT+L L L N L+
Sbjct: 102 LKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK 137
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 60 LRNLVQLNVAENKFYGMFPRSICN-ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIG 118
L +L QL + NK + P + N ++SL Y L++N+ SLP + L LKEL +
Sbjct: 51 LTSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALN 108
Query: 119 ANNFFGLIPDSLSNASNLELLDLSNNQFKG---KVSIDFSSLKILW 161
N L + L+ L L NQ K V +SL+ +W
Sbjct: 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 188 SSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGI-RNLVNLIALAVEV 246
+SL L L N+ LP+ + N +++ + NQ+ ++P G+ L L LA+
Sbjct: 52 TSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNT 109
Query: 247 NQLHGTIPD-VIGELKNLQLLGLYKNFLQGSIPSGL-GNLTKLAKLDLGSN 295
NQL ++PD V +L L+ L LY+N L+ S+P G+ LT L + L N
Sbjct: 110 NQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDN 158
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 9/152 (5%)
Query: 89 YFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKG 148
Y L +N SLP + L +L +L +G N L + ++L L+LS NQ +
Sbjct: 32 YLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90
Query: 149 KVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSI 208
+ F L L L L N L + G LT LK L L NQ +P +
Sbjct: 91 LPNGVFDKLTQLKELALNTNQL---QSLPDGVFDKLTQ---LKDLRLYQNQL-KSVPDGV 143
Query: 209 ANLSSTMIVFLIGGNQISGTIPLGIRNLVNLI 240
+ +++ + N T P GIR L I
Sbjct: 144 FDRLTSLQYIWLHDNPWDCTCP-GIRYLSEWI 174
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+++D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 35/204 (17%)
Query: 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-----KGAFRSFVA-ECE 581
S + +G G F V K A K I ++ +G R + E
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 582 ALRNIRHRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLI 640
LR IRH N+I + I + TD L+ E + G L D+L + E +
Sbjct: 82 ILREIRHPNIITLHDIFENKTDV------VLILELVSGGELFDFLAEKESLTEDEATQFL 135
Query: 641 QRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH----VGDFGLAKFLSSH 696
++ + + YLH + H DLKP N++L V + + DFG+A H
Sbjct: 136 KQ------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----H 181
Query: 697 HLDTSSKTPSSSIGIKGTVGYVAP 720
++ ++ + I GT +VAP
Sbjct: 182 KIEAGNEFKN----IFGTPEFVAP 201
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ +G G F V K A K I ++ + R V+ E LR IR
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + I + TD L+ E + G L D+L + E +++
Sbjct: 74 HPNIITLHDIFENKTDV------VLILELVSGGELFDFLAEKESLTEDEATQFLKQ---- 123
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH----VGDFGLAKFLSSHHLDTSS 702
+ + YLH + H DLKP N++L V + + DFG+A H ++ +
Sbjct: 124 --ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGN 173
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 174 EFKN----IFGTPEFVAP 187
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY G + L + + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+++D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRTWXL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVA------ECEALRNIR 587
+ + +G G F V K + A K I ++ + R V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 588 HRNLIKIITICSS-TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
H N+I + + + TD L+ E + G L D+L + E +++
Sbjct: 73 HPNVITLHEVYENKTDV------ILIGELVAGGELFDFLAEKESLTEEEATEFLKQ---- 122
Query: 647 IDVASAIEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVGDFGLAKFLSSHHLDTSS 702
+ + + YLH + H DLKP N+ LLD ++ + DFGLA H +D +
Sbjct: 123 --ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + I GT +VAP
Sbjct: 173 EFKN----IFGTPEFVAP 186
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFXEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFXEPHARFYAAQIVL 153
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 199
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 200 CGTPEYLAP 208
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY+ G + L + + + A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYVPGGEMFSHLRR------IGRFXEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+L+D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 74 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 132
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 133 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 180
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 181 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ ++ + R ++ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 592 IKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVAS 651
++ + S FK +V EY G + L + + + S A +
Sbjct: 101 PFLVKLEFS--FKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 152
Query: 652 AIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI 711
EYLH +++ DLKP N+++D V DFG AK + + +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRTWXL 198
Query: 712 KGTVGYVAP 720
GT Y+AP
Sbjct: 199 CGTPEYLAP 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 34/204 (16%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEMIVAVKV 564
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 41 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 97
Query: 565 -INLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGN 618
+ + ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 98 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EFCKF 153
Query: 619 GSLEDWLHQSNDQVEVCK----------LSLIQRLNIAIDVASAIEYL-HHHCQPPMVHG 667
G+L +L ++ K L+L + + VA +E+L C +H
Sbjct: 154 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 209
Query: 668 DLKPSNVLLDHDMVAHVGDFGLAK 691
DL N+LL V + DFGLA+
Sbjct: 210 DLAARNILLSEKNVVKICDFGLAR 233
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 30/170 (17%)
Query: 540 IGQGSFGSVYKGILGEDEMI-----VAVKV-----------INLKQKGAFRSFVAECEAL 583
IGQG FG +Y + E + VKV + Q+ A + +
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 584 RNIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
R +++ + K D G ++ ++ + G+ + ++++N + + S L
Sbjct: 103 RKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRFGSDLQK--IYEANAK----RFSRKTVL 155
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVGDFGLA 690
+++ + +EY+H H VHGD+K SN+LL++ D V ++ D+GLA
Sbjct: 156 QLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLIKIITI 597
QG + Y IL E VA+K ++ Q A R++ E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNV 91
Query: 598 CSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ +F+ V +V E M + +L + D + L L Q L I
Sbjct: 92 FTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDHERMSYL-LYQML-------VGI 139
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLIKIITI 597
QG + Y IL E VA+K ++ Q A R++ E ++ + H+N+I ++ +
Sbjct: 36 AQGIVVAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNV 91
Query: 598 CSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ +F+ V +V E M + +L + D + L L Q L I
Sbjct: 92 FTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDHERMSYL-LYQML-------VGI 139
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 37 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 95
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 96 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 143
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 505 SAHNSADTSPMEKQFPMVSYAELS-KATSEFSSSNMIGQGSFGSV---YKGILGEDEMIV 560
+ H + S ++ QF V + + + + IG G+ G V Y +L + I
Sbjct: 34 AKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK 93
Query: 561 AVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS----TDFKGVDFKALVFEYM 616
+ Q A R++ E ++ + H+N+I ++ + + +F+ V LV E M
Sbjct: 94 KLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV---YLVMELM 149
Query: 617 GNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676
+ +L + D + L L Q L I++LH ++H DLKPSN+++
Sbjct: 150 -DANLCQVIQMELDHERMSYL-LYQML-------CGIKHLH---SAGIIHRDLKPSNIVV 197
Query: 677 DHDMVAHVGDFGLAK 691
D + DFGLA+
Sbjct: 198 KSDCTLKILDFGLAR 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 35 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 93
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 94 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 141
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 142 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 94
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 95 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 142
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 29/195 (14%)
Query: 534 FSSSNMIGQGSFGSVY--KGILGEDE-MIVAVKVIN----LKQKGAFRSFVAECEALRNI 586
F ++G G++G V+ + I G D + A+KV+ +++ E + L +I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 587 RHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIA 646
R + + T+ K L+ +Y+ G L L Q E + I
Sbjct: 116 RQSPFLVTLHYAFQTETK----LHLILDYINGGELFTHLSQRERFTE-------HEVQIY 164
Query: 647 I-DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
+ ++ A+E+LH + +++ D+K N+LLD + + DFGL+K + +
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK-------EFVADET 214
Query: 706 SSSIGIKGTVGYVAP 720
+ GT+ Y+AP
Sbjct: 215 ERAYDFCGTIEYMAP 229
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+AL + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 100 GLSSLQKLVALETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 156
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 157 DLSSNKIQS 165
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 124 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 177
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLIKIITI 597
QG + Y IL E VA+K ++ Q A R++ E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNV 91
Query: 598 CSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ +F+ V +V E M + +L + D + L L Q L I
Sbjct: 92 FTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDHERMSYL-LYQML-------CGI 139
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 30 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 88
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 89 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 136
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 94
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 95 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 142
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLIKIITI 597
QG + Y IL E VA+K ++ Q A R++ E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNV 91
Query: 598 CSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ +F+ V +V E M + +L + D + L L Q L I
Sbjct: 92 FTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDHERMSYL-LYQML-------VGI 139
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLIKIITI 597
QG + Y IL E VA+K ++ Q A R++ E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNV 91
Query: 598 CSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ +F+ V +V E M + +L + D + L L Q L I
Sbjct: 92 FTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDHERMSYL-LYQML-------CGI 139
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 37 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 95
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 96 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 143
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 29 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 87
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 88 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 135
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 27/167 (16%)
Query: 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVIN------LKQKGAFRSFVAECEALRNIR 587
+ S +G G++GSV I VA+K ++ + K A+R + L++++
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL----LKHMQ 81
Query: 588 HRNLIKIITICS--STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ-VEVCKLSLIQRLN 644
H N+I ++ + + S+ DF LV +M Q++ Q + K S +
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDF-YLVMPFM----------QTDLQKIMGLKFSEEKIQY 130
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + ++Y+H +VH DLKP N+ ++ D + DFGLA+
Sbjct: 131 LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 193 LSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT 252
L L NQF +P ++N ++ L N+IS N+ L+ L + N+L
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDL-SNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 93
Query: 253 IPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSL 297
P LK+L+LL L+ N + +L+ L+ L +G+N L
Sbjct: 94 PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 121 NFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGF 180
N F L+P LSN +L L+DLSNN+ + FS++ L L L N L
Sbjct: 41 NQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDG 100
Query: 181 VTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQI 225
+ SL++LSL N +P N S + IG N +
Sbjct: 101 L------KSLRLLSLHGNDI-SVVPEGAFNDLSALSHLAIGANPL 138
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSS 600
QG + Y +L + I + Q A R++ E ++ + H+N+I ++ + +
Sbjct: 30 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTP 88
Query: 601 ----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+F+ V LV E M + +L + D + L L Q L I++L
Sbjct: 89 QKTLEEFQDV---YLVMELM-DANLCQVIQMELDHERMSYL-LYQML-------CGIKHL 136
Query: 657 HHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLIKIITI 597
QG + Y IL E VA+K ++ Q A R++ E ++ + H+N+I ++ +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNV 91
Query: 598 CSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAI 653
+ +F+ V +V E M + +L + D + L L Q L I
Sbjct: 92 FTPQKSLEEFQDV---YIVMELM-DANLSQVIQMELDHERMSYL-LYQML-------CGI 139
Query: 654 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
+G+G F ++ + + + A K++ + + E ++ HR+L +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
F+ DF +V E SL + LH+ + + R + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQYLHR 135
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+ ++H DLK N+ L+ D+ +GDFGLA + D K + GT Y+
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTPNYI 184
Query: 719 AP 720
AP
Sbjct: 185 AP 186
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
+G+G F ++ + + + A K++ + + E ++ HR+L +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
F+ DF +V E SL + LH+ + + R + +YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQYLHR 139
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+ ++H DLK N+ L+ D+ +GDFGLA + D K + GT Y+
Sbjct: 140 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTPNYI 188
Query: 719 AP 720
AP
Sbjct: 189 AP 190
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 34/204 (16%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEMIVAVKV 564
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 565 -INLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGN 618
+ + ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EFCKF 116
Query: 619 GSLEDWLHQSNDQVEVCK----------LSLIQRLNIAIDVASAIEYL-HHHCQPPMVHG 667
G+L +L ++ K L+L + + VA +E+L C +H
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 172
Query: 668 DLKPSNVLLDHDMVAHVGDFGLAK 691
DL N+LL V + DFGLA+
Sbjct: 173 DLAARNILLSEKNVVKICDFGLAR 196
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 540 IGQGSFGSVYKG-ILGEDEMIVAVKV-INLKQKGA----FRSFVAECEALRNI-RHRNLI 592
+G+G+FG V + G D+ V + + ++GA R+ ++E + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK----------LSLIQR 642
++ C+ G +V E+ G+L +L ++ K L+L
Sbjct: 86 NLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 34/204 (16%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEMIVAVKV 564
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 565 -INLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGN 618
+ + ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EFCKF 116
Query: 619 GSLEDWLHQSNDQVEVCK----------LSLIQRLNIAIDVASAIEYL-HHHCQPPMVHG 667
G+L +L ++ K L+L + + VA +E+L C +H
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 172
Query: 668 DLKPSNVLLDHDMVAHVGDFGLAK 691
DL N+LL V + DFGLA+
Sbjct: 173 DLAARNILLSEKNVVKICDFGLAR 196
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
+G+G F ++ + + + A K++ + + E ++ HR+L +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
F+ DF +V E SL + LH+ + + R + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQYLHR 135
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+ ++H DLK N+ L+ D+ +GDFGLA + D K + GT Y+
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTPNYI 184
Query: 719 AP 720
AP
Sbjct: 185 AP 186
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 34/204 (16%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEMIVAVKV 564
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 565 -INLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGN 618
+ + ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EFCKF 116
Query: 619 GSLEDWLHQSNDQVEVCK----------LSLIQRLNIAIDVASAIEYL-HHHCQPPMVHG 667
G+L +L ++ K L+L + + VA +E+L C +H
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 172
Query: 668 DLKPSNVLLDHDMVAHVGDFGLAK 691
DL N+LL V + DFGLA+
Sbjct: 173 DLAARNILLSEKNVVKICDFGLAR 196
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 34/204 (16%)
Query: 511 DTSPMEKQFPMVSYAELSKATSEFSSSNM-----IGQGSFGSVYKG-ILGEDEMIVAVKV 564
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 6 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 62
Query: 565 -INLKQKGA----FRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALVFEYMGN 618
+ + ++GA R+ ++E + L +I H N++ ++ C+ G +V E+
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EFCKF 118
Query: 619 GSLEDWLHQSNDQVEVCK----------LSLIQRLNIAIDVASAIEYL-HHHCQPPMVHG 667
G+L +L ++ K L+L + + VA +E+L C +H
Sbjct: 119 GNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 174
Query: 668 DLKPSNVLLDHDMVAHVGDFGLAK 691
DL N+LL V + DFGLA+
Sbjct: 175 DLAARNILLSEKNVVKICDFGLAR 198
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 38/197 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR-N 590
+F +G GSFG V E A+K+++ KQK L+ I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-KQK---------VVKLKQIEHTLN 91
Query: 591 LIKIITICSSTDFKGVDFK-------ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+I+ + ++F +V EY G + L + + + S
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHAR 145
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 146 FYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------R 191
Query: 704 TPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 192 VKGRTWXLCGTPEYLAP 208
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 38/197 (19%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR-N 590
+F +G GSFG V E A+K+++ KQK L+ I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-KQK---------VVKLKQIEHTLN 91
Query: 591 LIKIITICSSTDFKGVDFK-------ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRL 643
+I+ + ++F +V EY G + L + + + S
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHAR 145
Query: 644 NIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSK 703
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 146 FYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------R 191
Query: 704 TPSSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 192 VKGRTWXLCGTPEYLAP 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 74/198 (37%), Gaps = 40/198 (20%)
Query: 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL 591
+F +G GSFG V E A+K+++ KQK L+ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILD-KQK---------VVKLKQIEH--- 87
Query: 592 IKIITICSSTDFKGVDFKALV---FEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN---- 644
T+ + V+F LV F + N +L + + L I R
Sbjct: 88 ----TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA 143
Query: 645 --IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS 702
A + EYLH +++ DLKP N+++D V DFG AK
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------- 189
Query: 703 KTPSSSIGIKGTVGYVAP 720
+ + + GT Y+AP
Sbjct: 190 RVKGRTWXLCGTPEYLAP 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 19/185 (10%)
Query: 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALR 584
L ++ +IG+G+FG V + + A+K+++ + K + +F E +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLN 644
+ + + C+ D K + +V EYM G L + L + D E +
Sbjct: 130 AFANSPWV-VQLFCAFQDDK---YLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVV 184
Query: 645 IAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSH---HLDTS 701
+A+D ++ ++H D+KP N+LLD + DFG + H DT+
Sbjct: 185 LALDAIHSM---------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 702 SKTPS 706
TP
Sbjct: 236 VGTPD 240
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 188 SSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIP---LGIRNLVNLIALAV 244
S ++ ++ D + G H ++NL ++ GN I P G+ +L NL+A+
Sbjct: 64 SRCEIETIEDKAWHG--LHHLSNL-------ILTGNPIQSFSPGSFSGLTSLENLVAVET 114
Query: 245 EVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKLDLGSNSLQ 298
++ L + P IG+L L+ L + NF+ +P+ NLT L +DL N +Q
Sbjct: 115 KLASLE-SFP--IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 188 SSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIP---LGIRNLVNLIALAV 244
S ++ ++ D + G H ++NL ++ GN I P G+ +L NL+A+
Sbjct: 59 SRCEIETIEDKAWHG--LHHLSNL-------ILTGNPIQSFSPGSFSGLTSLENLVAVET 109
Query: 245 EVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKLDLGSNSLQ 298
++ L + P IG+L L+ L + NF+ +P+ NLT L +DL N +Q
Sbjct: 110 KLASLE-SFP--IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 161
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 22/182 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG V++ A K + + + E + + +RH L+ +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-- 222
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
F+ + +++E+M G L + D E K+S + + V + ++H +
Sbjct: 223 ---FEDDNEMVMIYEFMSGGEL---FEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI-KGTVGYV 718
VH DLKP N++ + L F + HLD P S+ + GT +
Sbjct: 275 N---YVHLDLKPENIMF---TTKRSNELKLIDFGLTAHLD-----PKQSVKVTTGTAEFA 323
Query: 719 AP 720
AP
Sbjct: 324 AP 325
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 540 IGQGSFGSVYKG-ILGEDEMIVAVKV-INLKQKGA----FRSFVAECEALRNI-RHRNLI 592
+G+G+FG V + G D+ V + + ++GA R+ ++E + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK----------LSLIQR 642
++ C+ K ++ E+ G+L +L ++ K L+L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 540 IGQGSFGSVYKG-ILGEDEMIVAVKV-INLKQKGA----FRSFVAECEALRNI-RHRNLI 592
+G+G+FG V + G D+ V + + ++GA R+ ++E + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK----------LSLIQR 642
++ C+ K ++ E+ G+L +L ++ K L+L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 540 IGQGSFGSVYKG-ILGEDEMIVAVKV-INLKQKGA----FRSFVAECEALRNI-RHRNLI 592
+G+G+FG V + G D+ V + + ++GA R+ ++E + L +I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK----------LSLIQR 642
++ C+ K ++ E+ G+L +L ++ K L+L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 643 LNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
+ + VA +E+L +H DL N+LL V + DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+A+ + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 100 GLSSLQKLVAVETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 156
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 157 DLSSNKIQS 165
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 124 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 177
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+A+ + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 99 GLSSLQKLVAVETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 155
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 156 DLSSNKIQS 164
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 123 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 176
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+A+ + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 98 GLSSLQKLVAVETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 155 DLSSNKIQS 163
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 175
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 646 AIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTP 705
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 706 SSSIGIKGTVGYVAP 720
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
+G+G F ++ + + + A K++ + + E ++ HR+L +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
F+ DF +V E SL + LH+ + + R + +YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQYLHR 159
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+ ++H DLK N+ L+ D+ +GDFGLA + D K + GT Y+
Sbjct: 160 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----VLCGTPNYI 208
Query: 719 AP 720
AP
Sbjct: 209 AP 210
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 22/182 (12%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICS 599
+G G+FG V++ A K + + + E + + +RH L+ +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-- 116
Query: 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH 659
F+ + +++E+M G L + D E K+S + + V + ++H +
Sbjct: 117 ---FEDDNEMVMIYEFMSGGEL---FEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGI-KGTVGYV 718
VH DLKP N++ + L F + HLD P S+ + GT +
Sbjct: 169 N---YVHLDLKPENIMF---TTKRSNELKLIDFGLTAHLD-----PKQSVKVTTGTAEFA 217
Query: 719 AP 720
AP
Sbjct: 218 AP 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVIN------LKQKGAFRSFVAECEALRNIRHRNLIKI 594
QG + Y IL E VA+K ++ K A+R V ++ + H+N+I +
Sbjct: 41 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIIGL 93
Query: 595 ITICSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
+ + + +F+ V +V E M + +L + D + L L Q L
Sbjct: 94 LNVFTPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDHERMSYL-LYQML------- 141
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 142 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 539 MIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITIC 598
+G+G F ++ + + + A K++ + + E ++ HR+L +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 599 SSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH 658
F+ DF +V E SL + LH+ + + R + +YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQYLHR 157
Query: 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYV 718
+ ++H DLK N+ L+ D+ +GDFGLA + D K + GT Y+
Sbjct: 158 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----VLCGTPNYI 206
Query: 719 AP 720
AP
Sbjct: 207 AP 208
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVIN------LKQKGAFRSFVAECEALRNIRHRNLIKI 594
QG + Y IL E VA+K ++ K A+R V ++ + H+N+I +
Sbjct: 36 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIIGL 88
Query: 595 ITICSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
+ + + +F+ V +V E M + +L + D + L L Q L
Sbjct: 89 LNVFTPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDHERMSYL-LYQML------- 136
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 232 GIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG-SIPSGLGNLTKLAKL 290
G+ +L L+A+ + L P IG LK L+ L + N +Q +P NLT L L
Sbjct: 99 GLSSLQKLVAVETNLASLEN-FP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 155
Query: 291 DLGSNSLQG 299
DL SN +Q
Sbjct: 156 DLSSNKIQS 164
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 108 NLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163
+L LKEL + N +P+ SN +NLE LDLS+N+ + SI + L++L ++
Sbjct: 123 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ---SIYCTDLRVLHQM 176
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 9 IGSLFKLQALALAGNYLTG-KLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL 63
IG L L+ L +A N + KLP++ NL+ L+ + + N + + T L +L +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAE---CEALRNIRHRNLIKIIT 596
+G+GSF K + + AVK+I+ + + + + CE H N++K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG-----HPNIVKLHE 73
Query: 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYL 656
+ F LV E + G L + + + E ++++L SA+ ++
Sbjct: 74 V-----FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL------VSAVSHM 122
Query: 657 HHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDFGLAKF 692
H +VH DLKP N+L + ++ + DFG A+
Sbjct: 123 H---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K++ I K +L+FEY+ N +V L+ ++
Sbjct: 108 NIVKLLDIVRDQHSKT---PSLIFEYVNNTDF---------KVLYPTLTDYDIRYYIYEL 155
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVGDFGLAKF 692
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 156 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 196
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDV 649
N++K++ I K +L+FEY+ N +V L+ ++
Sbjct: 87 NIVKLLDIVRDQHSKT---PSLIFEYVNNTDF---------KVLYPTLTDYDIRYYIYEL 134
Query: 650 ASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVGDFGLAKF 692
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 135 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 541 GQGSFGSVYKGILGEDEMIVAVKVIN------LKQKGAFRSFVAECEALRNIRHRNLIKI 594
QG + Y IL E VA+K ++ K A+R V ++ + H+N+I +
Sbjct: 30 AQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIIGL 82
Query: 595 ITICSS----TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVA 650
+ + + +F+ V +V E M + +L + D + L L Q L
Sbjct: 83 LNVFTPQKSLEEFQDV---YIVMELM-DANLCQVIQMELDHERMSYL-LYQML------- 130
Query: 651 SAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691
I++LH ++H DLKPSN+++ D + DFGLA+
Sbjct: 131 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,003,943
Number of Sequences: 62578
Number of extensions: 797482
Number of successful extensions: 4409
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 496
Number of HSP's that attempted gapping in prelim test: 2220
Number of HSP's gapped (non-prelim): 1536
length of query: 725
length of database: 14,973,337
effective HSP length: 106
effective length of query: 619
effective length of database: 8,340,069
effective search space: 5162502711
effective search space used: 5162502711
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)