Query 048668
Match_columns 725
No_of_seqs 553 out of 4588
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 20:43:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048668.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048668hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.1E-58 3.8E-63 540.6 35.1 447 2-472 213-755 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.7E-54 1.6E-58 501.6 33.9 439 9-459 196-722 (768)
3 3t6q_A CD180 antigen; protein- 100.0 3.2E-52 1.1E-56 475.3 34.3 447 4-456 26-563 (606)
4 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-50 4.3E-55 462.2 33.8 432 4-457 25-562 (606)
5 3t6q_A CD180 antigen; protein- 100.0 1.9E-50 6.4E-55 460.7 34.1 415 15-451 14-511 (606)
6 1ziw_A TOLL-like receptor 3; i 100.0 3.6E-50 1.2E-54 464.6 36.5 449 6-457 66-626 (680)
7 3j0a_A TOLL-like receptor 5; m 100.0 2.3E-50 8E-55 475.3 31.4 444 4-457 18-564 (844)
8 2z63_A TOLL-like receptor 4, v 100.0 4.4E-49 1.5E-53 446.2 31.7 427 4-456 21-534 (570)
9 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-48 4.5E-53 451.5 36.1 436 3-451 17-515 (680)
10 3vq2_A TLR4, TOLL-like recepto 100.0 9.3E-48 3.2E-52 438.5 31.6 415 2-437 45-565 (606)
11 3j0a_A TOLL-like receptor 5; m 100.0 8.1E-48 2.8E-52 453.6 30.5 430 16-452 7-538 (844)
12 4eco_A Uncharacterized protein 100.0 2.1E-48 7.2E-53 443.6 23.9 418 13-457 81-604 (636)
13 2z81_A CD282 antigen, TOLL-lik 100.0 1.4E-47 4.9E-52 431.6 25.4 421 3-455 18-512 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 1.8E-47 6.1E-52 433.1 25.3 417 3-437 42-538 (570)
15 4ecn_A Leucine-rich repeat pro 100.0 1.2E-47 4.2E-52 443.9 23.4 393 13-434 323-844 (876)
16 4eco_A Uncharacterized protein 100.0 7.4E-47 2.5E-51 430.8 25.9 406 1-435 93-605 (636)
17 4g8a_A TOLL-like receptor 4; l 100.0 9.1E-46 3.1E-50 424.7 35.0 436 3-456 44-583 (635)
18 4ecn_A Leucine-rich repeat pro 100.0 1.3E-46 4.6E-51 435.2 28.1 402 1-431 335-865 (876)
19 2z81_A CD282 antigen, TOLL-lik 100.0 7.9E-47 2.7E-51 425.6 21.3 408 2-435 39-515 (549)
20 2z7x_B TOLL-like receptor 1, v 100.0 5.8E-46 2E-50 415.5 26.3 425 4-455 14-483 (520)
21 2z7x_B TOLL-like receptor 1, v 100.0 9.3E-45 3.2E-49 405.7 23.7 404 3-435 35-486 (520)
22 3v47_A TOLL-like receptor 5B a 100.0 8.2E-44 2.8E-48 391.2 30.4 380 4-436 24-414 (455)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.6E-44 3.3E-48 400.9 28.3 411 15-455 33-512 (562)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.7E-43 5.7E-48 398.9 25.4 405 4-436 45-516 (562)
25 4g8a_A TOLL-like receptor 4; l 100.0 1.3E-42 4.5E-47 398.4 28.7 416 6-436 69-586 (635)
26 3v47_A TOLL-like receptor 5B a 100.0 2E-42 6.9E-47 380.1 27.1 390 15-457 12-412 (455)
27 2id5_A Lingo-1, leucine rich r 100.0 6.3E-41 2.2E-45 370.3 27.0 349 89-460 15-363 (477)
28 1jl5_A Outer protein YOPM; leu 100.0 8.9E-41 3E-45 364.1 26.2 358 3-431 24-410 (454)
29 1o6v_A Internalin A; bacterial 100.0 6.4E-40 2.2E-44 360.6 32.2 348 12-434 45-392 (466)
30 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-39 4.2E-44 355.4 25.0 345 5-436 34-393 (457)
31 1jl5_A Outer protein YOPM; leu 100.0 1.4E-39 4.7E-44 354.8 24.7 374 6-452 5-408 (454)
32 2id5_A Lingo-1, leucine rich r 100.0 5.9E-39 2E-43 354.5 26.4 349 15-435 13-361 (477)
33 1o6v_A Internalin A; bacterial 100.0 2.4E-38 8.2E-43 348.1 28.1 347 34-454 43-389 (466)
34 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-39 4.7E-44 330.6 15.1 172 532-723 32-206 (311)
35 3bz5_A Internalin-J, INLJ; leu 100.0 1.5E-38 5.2E-43 346.8 24.2 364 14-458 19-391 (457)
36 4fih_A Serine/threonine-protei 100.0 2.5E-39 8.7E-44 333.8 14.6 170 532-724 74-243 (346)
37 3o6n_A APL1; leucine-rich repe 100.0 6.2E-38 2.1E-42 336.9 24.6 335 12-457 44-378 (390)
38 3o6n_A APL1; leucine-rich repe 100.0 2.5E-38 8.6E-43 339.9 21.0 313 36-457 44-356 (390)
39 4b9d_A Serine/threonine-protei 100.0 3E-39 1E-43 333.8 12.9 174 531-724 23-198 (350)
40 3oja_B Anopheles plasmodium-re 100.0 7.9E-38 2.7E-42 354.4 24.5 336 37-459 51-386 (597)
41 4fie_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 336.0 15.5 170 532-724 151-320 (423)
42 3fpq_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 318.4 16.2 171 535-723 29-202 (290)
43 3hyh_A Carbon catabolite-derep 100.0 3.8E-38 1.3E-42 315.8 14.5 170 531-724 12-184 (275)
44 4asz_A BDNF/NT-3 growth factor 100.0 2E-38 6.7E-43 323.4 11.6 178 532-723 13-202 (299)
45 4g3f_A NF-kappa-beta-inducing 100.0 5E-38 1.7E-42 323.2 13.7 172 531-724 57-229 (336)
46 4aoj_A High affinity nerve gro 100.0 6.7E-38 2.3E-42 324.0 14.6 179 532-724 41-233 (329)
47 4g31_A Eukaryotic translation 100.0 8E-38 2.7E-42 319.5 15.0 188 531-724 4-203 (299)
48 3omv_A RAF proto-oncogene seri 100.0 7.7E-38 2.6E-42 318.8 14.5 171 530-723 34-206 (307)
49 4gt4_A Tyrosine-protein kinase 100.0 2.4E-37 8.1E-42 316.8 15.5 178 532-723 26-219 (308)
50 3ubd_A Ribosomal protein S6 ki 100.0 3.4E-38 1.2E-42 320.6 9.0 171 532-724 24-199 (304)
51 4fmz_A Internalin; leucine ric 100.0 1.2E-35 4E-40 314.0 27.2 308 32-430 39-346 (347)
52 4fmz_A Internalin; leucine ric 100.0 9.7E-36 3.3E-40 314.6 26.0 307 9-406 40-346 (347)
53 2ft3_A Biglycan; proteoglycan, 100.0 4.2E-35 1.5E-39 307.4 25.4 126 14-146 34-159 (332)
54 3oja_B Anopheles plasmodium-re 100.0 2.6E-35 9E-40 333.7 24.5 312 60-456 50-361 (597)
55 3hmm_A TGF-beta receptor type- 100.0 1.9E-36 6.6E-41 311.1 13.7 177 532-723 3-184 (303)
56 1xku_A Decorin; proteoglycan, 100.0 2.2E-34 7.5E-39 301.8 25.7 150 14-170 32-183 (330)
57 4b99_A Mitogen-activated prote 100.0 1E-35 3.5E-40 315.7 15.4 179 532-724 54-235 (398)
58 4ase_A Vascular endothelial gr 100.0 3.6E-36 1.2E-40 313.6 11.1 189 522-723 54-259 (353)
59 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-34 3.6E-39 301.1 19.9 258 188-459 50-310 (313)
60 2ft3_A Biglycan; proteoglycan, 100.0 3E-33 1E-37 293.4 26.7 288 86-428 34-331 (332)
61 3v5w_A G-protein coupled recep 100.0 1.4E-34 4.8E-39 319.3 15.7 170 531-724 188-363 (689)
62 1z7x_W Ribonuclease inhibitor; 100.0 3.2E-37 1.1E-41 339.3 -7.5 384 13-430 3-440 (461)
63 1xku_A Decorin; proteoglycan, 100.0 1.3E-32 4.4E-37 288.3 26.5 275 4-295 45-329 (330)
64 4f9c_A Cell division cycle 7-r 100.0 6.6E-34 2.3E-38 298.7 14.8 176 530-724 19-219 (361)
65 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-33 6.3E-38 291.8 15.9 249 13-296 50-302 (313)
66 3uto_A Twitchin; kinase, muscl 100.0 2.7E-33 9.2E-38 312.1 15.6 172 531-724 156-329 (573)
67 1z7x_W Ribonuclease inhibitor; 100.0 7.2E-36 2.5E-40 328.5 -6.7 374 9-412 24-446 (461)
68 2z80_A TOLL-like receptor 2, v 100.0 3.5E-31 1.2E-35 280.1 19.5 283 6-299 24-315 (353)
69 2z80_A TOLL-like receptor 2, v 100.0 9.7E-32 3.3E-36 284.4 14.0 267 3-278 44-318 (353)
70 3zyi_A Leucine-rich repeat-con 100.0 3.7E-30 1.3E-34 281.6 24.6 248 14-298 55-303 (452)
71 3zyj_A Leucine-rich repeat-con 100.0 4.3E-30 1.5E-34 280.2 24.9 248 14-298 44-292 (440)
72 3fe3_A MAP/microtubule affinit 100.0 6.5E-31 2.2E-35 274.1 15.5 171 530-723 13-185 (328)
73 3fxz_A Serine/threonine-protei 100.0 1.3E-30 4.6E-35 268.4 17.7 170 531-723 19-188 (297)
74 1o6l_A RAC-beta serine/threoni 100.0 9.7E-31 3.3E-35 273.5 16.9 172 531-724 4-178 (337)
75 2z66_A Variable lymphocyte rec 100.0 4.8E-30 1.7E-34 265.7 20.3 249 15-298 9-261 (306)
76 4aw2_A Serine/threonine-protei 100.0 5.8E-31 2E-35 284.0 13.4 178 527-724 69-249 (437)
77 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.1E-31 3.1E-35 275.5 14.6 172 530-723 21-196 (353)
78 3v8s_A RHO-associated protein 100.0 6E-31 2E-35 281.7 12.2 177 526-724 63-242 (410)
79 4fr4_A YANK1, serine/threonine 100.0 2.2E-30 7.6E-35 274.8 16.4 171 531-724 14-187 (384)
80 3zgw_A Maternal embryonic leuc 100.0 1.3E-30 4.5E-35 273.3 14.3 174 530-724 8-182 (347)
81 3s95_A LIMK-1, LIM domain kina 100.0 3E-30 1E-34 267.8 16.7 181 531-724 9-195 (310)
82 2vd5_A DMPK protein; serine/th 100.0 1E-30 3.5E-35 280.0 13.0 178 527-724 56-236 (412)
83 4dc2_A Protein kinase C IOTA t 100.0 1.9E-30 6.7E-35 276.1 14.9 172 531-724 51-226 (396)
84 2c30_A Serine/threonine-protei 100.0 6.4E-30 2.2E-34 266.3 18.1 182 520-724 23-214 (321)
85 1xjd_A Protein kinase C, theta 100.0 2.8E-30 9.6E-35 270.7 15.3 174 529-724 14-191 (345)
86 2yab_A Death-associated protei 100.0 5.9E-30 2E-34 270.0 17.4 171 531-724 11-191 (361)
87 1fot_A TPK1 delta, CAMP-depend 100.0 4.4E-30 1.5E-34 266.6 15.8 169 531-724 5-176 (318)
88 3a8x_A Protein kinase C IOTA t 100.0 4.8E-30 1.6E-34 269.5 16.2 172 531-724 8-183 (345)
89 3zyj_A Leucine-rich repeat-con 100.0 2.8E-29 9.7E-34 273.6 22.8 249 37-334 43-292 (440)
90 2i0e_A Protein kinase C-beta I 100.0 4.8E-30 1.6E-34 269.9 15.1 173 530-724 18-194 (353)
91 1ozn_A Reticulon 4 receptor; N 100.0 8.5E-30 2.9E-34 261.0 16.5 226 15-275 13-239 (285)
92 3zyi_A Leucine-rich repeat-con 100.0 3.7E-29 1.3E-33 273.7 22.5 249 38-335 55-304 (452)
93 3qd2_B Eukaryotic translation 100.0 1.3E-29 4.3E-34 265.9 17.3 188 530-723 4-248 (332)
94 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.7E-30 2.3E-34 268.8 15.2 169 531-724 40-211 (350)
95 3rp9_A Mitogen-activated prote 100.0 6.5E-30 2.2E-34 280.2 15.7 184 531-724 52-256 (458)
96 2z66_A Variable lymphocyte rec 100.0 6.7E-30 2.3E-34 264.7 14.8 236 4-250 21-261 (306)
97 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.7E-30 3.3E-34 265.6 15.8 170 531-724 8-180 (336)
98 3tki_A Serine/threonine-protei 100.0 5.6E-30 1.9E-34 266.9 13.8 173 531-723 6-179 (323)
99 4eqm_A Protein kinase; transfe 100.0 7.6E-30 2.6E-34 262.5 14.5 172 531-723 10-184 (294)
100 1ozn_A Reticulon 4 receptor; N 100.0 1.5E-29 5.2E-34 259.1 16.5 215 4-228 25-240 (285)
101 2bdw_A Hypothetical protein K1 100.0 1.6E-29 5.3E-34 267.6 16.3 172 530-724 27-203 (362)
102 3g06_A SSPH2 (leucine-rich rep 100.0 2.2E-28 7.6E-33 274.2 26.4 68 344-416 240-307 (622)
103 3soa_A Calcium/calmodulin-depe 100.0 1.6E-29 5.4E-34 273.8 16.2 173 530-724 9-186 (444)
104 2r5t_A Serine/threonine-protei 100.0 8.6E-30 3E-34 269.8 13.4 172 531-724 37-212 (373)
105 2y0a_A Death-associated protei 100.0 2.7E-29 9.1E-34 262.3 16.9 169 532-723 11-189 (326)
106 1tki_A Titin; serine kinase, m 100.0 1.6E-29 5.6E-34 263.0 15.0 171 531-724 4-176 (321)
107 2pmi_A Negative RE, cyclin-dep 100.0 2.1E-29 7.3E-34 262.1 15.7 177 531-724 4-181 (317)
108 2acx_A G protein-coupled recep 100.0 1.8E-29 6.2E-34 278.6 15.7 173 531-724 183-358 (576)
109 2zv2_A Calcium/calmodulin-depe 100.0 2E-29 6.9E-34 260.0 14.8 173 531-724 12-210 (298)
110 3g06_A SSPH2 (leucine-rich rep 100.0 4.5E-28 1.5E-32 271.7 26.4 266 14-391 41-306 (622)
111 3c0i_A Peripheral plasma membr 100.0 1.5E-29 5.2E-34 266.9 13.7 176 531-724 23-206 (351)
112 3o0g_A Cell division protein k 100.0 3.7E-29 1.3E-33 257.3 16.1 171 532-724 2-174 (292)
113 2qkw_B Protein kinase; three-h 100.0 1.6E-29 5.6E-34 263.7 13.4 181 526-723 33-213 (321)
114 2psq_A Fibroblast growth facto 100.0 3.3E-29 1.1E-33 266.0 15.9 179 531-723 80-277 (370)
115 1kob_A Twitchin; kinase, intra 100.0 3.3E-29 1.1E-33 266.7 15.6 172 531-724 50-223 (387)
116 3a62_A Ribosomal protein S6 ki 100.0 2.5E-29 8.6E-34 262.6 14.4 172 531-724 16-194 (327)
117 3n9x_A Phosphotransferase; mal 100.0 3E-29 1E-33 272.3 15.3 184 531-724 25-224 (432)
118 3uim_A Brassinosteroid insensi 100.0 2.7E-29 9.2E-34 262.7 14.4 190 519-723 17-207 (326)
119 2y94_A 5'-AMP-activated protei 100.0 3.1E-29 1E-33 273.3 15.3 171 531-724 15-188 (476)
120 3kul_A Ephrin type-A receptor 100.0 3E-29 1E-33 261.8 14.5 175 531-723 48-226 (325)
121 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.3E-29 1.5E-33 275.1 16.4 175 532-724 185-362 (543)
122 4ejn_A RAC-alpha serine/threon 100.0 1.3E-29 4.5E-34 276.6 11.7 171 531-723 147-321 (446)
123 3ugc_A Tyrosine-protein kinase 100.0 1.7E-29 6E-34 260.1 11.5 177 531-723 9-189 (295)
124 2vuw_A Serine/threonine-protei 100.0 5.1E-30 1.8E-34 269.2 7.6 169 531-724 19-250 (336)
125 3uc3_A Serine/threonine-protei 100.0 3.6E-29 1.2E-33 264.9 14.1 169 531-723 19-189 (361)
126 2x4f_A Myosin light chain kina 100.0 3.9E-29 1.3E-33 265.5 14.2 166 536-723 93-260 (373)
127 3p86_A Serine/threonine-protei 100.0 4.6E-29 1.6E-33 258.3 14.3 175 529-724 34-212 (309)
128 4fcg_A Uncharacterized protein 100.0 1.7E-28 5.9E-33 255.9 18.6 226 13-274 81-314 (328)
129 3ork_A Serine/threonine protei 100.0 1.5E-29 5.1E-34 262.6 10.4 178 531-723 11-191 (311)
130 3f3z_A Calcium/calmodulin-depe 100.0 9.6E-29 3.3E-33 252.1 16.2 170 531-723 8-180 (277)
131 4euu_A Serine/threonine-protei 100.0 8E-29 2.7E-33 258.2 15.8 174 532-723 9-187 (319)
132 3gni_B Strad alpha; kinase fol 100.0 9.3E-29 3.2E-33 265.1 16.4 182 530-724 23-208 (389)
133 3oja_A Leucine-rich immune mol 100.0 8.3E-30 2.8E-34 280.3 8.3 216 188-430 34-250 (487)
134 3niz_A Rhodanese family protei 100.0 8.9E-29 3.1E-33 256.6 15.4 171 531-724 20-192 (311)
135 3cbl_A C-FES, proto-oncogene t 100.0 2.9E-29 1E-33 267.5 11.7 175 530-723 112-287 (377)
136 3soc_A Activin receptor type-2 100.0 5E-29 1.7E-33 259.9 13.1 178 530-724 22-206 (322)
137 2qol_A Ephrin receptor; recept 100.0 5.6E-29 1.9E-33 264.5 13.6 175 531-723 44-222 (373)
138 3ogk_B Coronatine-insensitive 100.0 5.5E-31 1.9E-35 299.2 -2.4 406 9-432 69-528 (592)
139 3vhe_A Vascular endothelial gr 100.0 3.6E-29 1.2E-33 265.5 11.7 189 522-723 12-267 (359)
140 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-28 5.1E-33 256.4 15.7 162 537-723 16-181 (325)
141 3o53_A Protein LRIM1, AGAP0063 100.0 2.3E-29 8E-34 261.6 9.4 258 15-293 12-270 (317)
142 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-28 3.9E-33 255.9 14.5 170 532-724 57-229 (311)
143 3i6u_A CDS1, serine/threonine- 100.0 9.6E-29 3.3E-33 267.0 14.5 171 530-724 133-314 (419)
144 4fcg_A Uncharacterized protein 100.0 6.7E-28 2.3E-32 251.4 20.2 225 188-430 81-314 (328)
145 2w4o_A Calcium/calmodulin-depe 100.0 8.9E-29 3E-33 260.7 13.6 169 531-724 52-223 (349)
146 2ac3_A MAP kinase-interacting 100.0 1.9E-28 6.6E-33 255.0 15.9 177 532-723 12-193 (316)
147 3dls_A PAS domain-containing s 100.0 5.3E-29 1.8E-33 260.8 11.6 172 530-724 22-202 (335)
148 3ttj_A Mitogen-activated prote 100.0 1.1E-28 3.8E-33 269.5 14.5 173 531-724 61-236 (464)
149 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.8E-29 2.3E-33 263.8 12.5 177 530-724 63-258 (365)
150 3q4u_A Activin receptor type-1 100.0 1.4E-28 4.9E-33 254.1 14.5 174 531-724 7-190 (301)
151 2izr_A Casein kinase I isoform 100.0 1.2E-28 4.1E-33 258.1 14.1 177 531-724 8-190 (330)
152 3l9p_A Anaplastic lymphoma kin 100.0 5.8E-29 2E-33 264.0 11.8 179 531-723 70-258 (367)
153 3g33_A Cell division protein k 100.0 1.8E-28 6.3E-33 254.1 15.3 177 530-723 7-191 (308)
154 1ob3_A PFPK5, cell division co 100.0 9.4E-29 3.2E-33 253.6 12.8 170 532-724 2-173 (288)
155 4hcu_A Tyrosine-protein kinase 100.0 1.6E-28 5.5E-33 249.3 14.2 171 531-723 9-179 (269)
156 3pfq_A PKC-B, PKC-beta, protei 100.0 1.6E-28 5.5E-33 279.8 15.8 173 530-724 339-515 (674)
157 2a2a_A Death-associated protei 100.0 2.4E-28 8.4E-33 254.7 15.8 170 531-723 11-190 (321)
158 3oz6_A Mitogen-activated prote 100.0 2.3E-28 7.7E-33 262.0 15.7 182 529-724 6-203 (388)
159 2qr7_A Ribosomal protein S6 ki 100.0 2E-28 6.9E-33 256.8 14.9 168 530-723 20-192 (342)
160 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.5E-29 2.6E-33 259.4 11.4 175 527-724 29-210 (329)
161 3cok_A Serine/threonine-protei 100.0 3.2E-28 1.1E-32 248.4 15.6 174 530-724 9-185 (278)
162 2eue_A Carbon catabolite derep 100.0 2.4E-28 8.2E-33 248.9 14.6 170 531-724 12-184 (275)
163 2nru_A Interleukin-1 receptor- 100.0 6.5E-28 2.2E-32 249.9 17.9 186 519-723 12-207 (307)
164 3mwu_A Calmodulin-domain prote 100.0 3E-28 1E-32 268.8 16.3 172 530-724 20-196 (486)
165 4fvq_A Tyrosine-protein kinase 100.0 9E-29 3.1E-33 254.0 11.2 168 531-723 7-189 (289)
166 4eut_A Serine/threonine-protei 100.0 2.1E-28 7.3E-33 262.6 14.6 175 531-723 8-187 (396)
167 1u5q_A Serine/threonine protei 100.0 1.9E-28 6.6E-33 257.7 13.9 166 532-723 54-222 (348)
168 3o53_A Protein LRIM1, AGAP0063 100.0 2.4E-29 8.2E-34 261.5 6.9 266 39-386 12-280 (317)
169 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.6E-28 1.2E-32 246.5 15.4 171 531-723 7-177 (268)
170 1luf_A Muscle-specific tyrosin 100.0 1.8E-28 6.2E-33 258.4 13.5 180 530-723 45-248 (343)
171 3is5_A Calcium-dependent prote 100.0 3.1E-28 1.1E-32 249.3 14.9 173 532-723 22-198 (285)
172 3g2f_A Bone morphogenetic prot 100.0 2.7E-28 9.1E-33 256.3 14.7 182 531-724 12-201 (336)
173 2yex_A Serine/threonine-protei 100.0 5.1E-28 1.7E-32 246.6 16.3 175 530-724 5-180 (276)
174 1nxk_A MAP kinase-activated pr 100.0 2.9E-28 1E-32 261.3 15.2 172 531-724 60-236 (400)
175 2y7j_A Phosphorylase B kinase 100.0 4.2E-28 1.4E-32 257.2 16.2 175 526-723 88-271 (365)
176 3kk8_A Calcium/calmodulin depe 100.0 4.8E-28 1.6E-32 247.9 16.1 171 531-724 5-180 (284)
177 2owb_A Serine/threonine-protei 100.0 4.1E-28 1.4E-32 254.4 16.0 172 530-723 39-213 (335)
178 2rku_A Serine/threonine-protei 100.0 4.8E-28 1.6E-32 249.2 16.2 172 531-724 14-188 (294)
179 4agu_A Cyclin-dependent kinase 100.0 2.8E-28 9.7E-33 253.1 14.5 170 532-723 3-174 (311)
180 1opk_A P150, C-ABL, proto-onco 100.0 2E-28 6.9E-33 270.1 14.0 174 530-723 218-391 (495)
181 3hko_A Calcium/calmodulin-depe 100.0 2.2E-28 7.6E-33 257.9 13.6 185 527-723 21-246 (345)
182 3fdn_A Serine/threonine-protei 100.0 2.7E-28 9.3E-33 249.0 13.7 170 530-723 7-179 (279)
183 3qup_A Tyrosine-protein kinase 100.0 1.7E-28 5.9E-33 256.2 12.5 185 530-723 21-211 (323)
184 3llt_A Serine/threonine kinase 100.0 1.8E-28 6.2E-33 260.1 12.7 178 522-724 25-232 (360)
185 3lij_A Calcium/calmodulin depe 100.0 3.4E-28 1.2E-32 268.9 15.3 170 531-723 36-210 (494)
186 3qyz_A Mitogen-activated prote 100.0 2.6E-28 8.9E-33 259.1 13.8 178 530-723 25-203 (364)
187 4f0f_A Serine/threonine-protei 100.0 6.3E-28 2.2E-32 247.4 15.9 167 531-723 18-198 (287)
188 1cm8_A Phosphorylated MAP kina 100.0 3.5E-28 1.2E-32 257.8 14.5 171 531-723 24-197 (367)
189 3lb7_A RAF proto-oncogene seri 100.0 5E-28 1.7E-32 250.3 15.2 171 530-723 34-206 (307)
190 3lxl_A Tyrosine-protein kinase 100.0 3.2E-28 1.1E-32 254.5 13.9 176 532-723 23-202 (327)
191 2ivs_A Proto-oncogene tyrosine 100.0 4.2E-28 1.4E-32 252.2 14.6 180 530-723 21-224 (314)
192 3gen_A Tyrosine-protein kinase 100.0 4.4E-28 1.5E-32 248.0 14.4 172 530-723 22-193 (283)
193 3q5i_A Protein kinase; CDPK, m 100.0 6.4E-28 2.2E-32 267.4 16.8 171 530-723 34-220 (504)
194 3poz_A Epidermal growth factor 100.0 2.2E-28 7.5E-33 255.6 12.3 173 531-723 14-191 (327)
195 1wwl_A Monocyte differentiatio 100.0 1.6E-29 5.4E-34 262.3 3.5 252 32-298 38-309 (312)
196 3oja_A Leucine-rich immune mol 100.0 1.2E-28 4E-33 271.2 10.6 234 13-268 34-269 (487)
197 1ua2_A CAK, cell division prot 100.0 2.8E-28 9.7E-33 256.9 13.2 174 529-724 7-185 (346)
198 1vzo_A Ribosomal protein S6 ki 99.9 1.9E-28 6.5E-33 258.9 11.1 173 531-724 53-233 (355)
199 3kex_A Receptor tyrosine-prote 99.9 2.1E-28 7E-33 255.7 11.3 172 532-723 13-189 (325)
200 1x8b_A WEE1HU, WEE1-like prote 99.9 8.6E-28 2.9E-32 246.5 15.6 173 530-724 9-203 (289)
201 4e5w_A Tyrosine-protein kinase 99.9 5.5E-28 1.9E-32 249.8 14.2 176 532-723 21-201 (302)
202 2h6d_A 5'-AMP-activated protei 99.9 9.6E-28 3.3E-32 244.5 15.7 171 531-724 10-183 (276)
203 3tt0_A Basic fibroblast growth 99.9 7.7E-28 2.6E-32 257.1 15.6 179 531-723 68-265 (382)
204 3bhy_A Death-associated protei 99.9 9.1E-28 3.1E-32 245.7 15.3 169 532-723 5-183 (283)
205 3mi9_A Cell division protein k 99.9 8.6E-28 3E-32 253.9 15.6 181 531-724 16-201 (351)
206 3ogk_B Coronatine-insensitive 99.9 7.3E-30 2.5E-34 289.9 -0.3 400 11-427 110-548 (592)
207 3nyv_A Calmodulin-domain prote 99.9 3.3E-28 1.1E-32 268.6 12.8 170 531-723 25-200 (484)
208 2jam_A Calcium/calmodulin-depe 99.9 8.3E-28 2.9E-32 248.7 15.0 170 531-724 8-180 (304)
209 2vgo_A Serine/threonine-protei 99.9 9.9E-28 3.4E-32 245.5 15.3 170 531-724 13-185 (284)
210 1t4h_A Serine/threonine-protei 99.9 1.3E-27 4.4E-32 245.5 16.1 171 533-723 27-202 (290)
211 3mtl_A Cell division protein k 99.9 1.8E-28 6.1E-33 256.0 9.8 171 532-724 2-173 (324)
212 2h34_A Serine/threonine-protei 99.9 9.8E-28 3.3E-32 248.6 15.3 174 530-724 32-208 (309)
213 1wwl_A Monocyte differentiatio 99.9 1.1E-28 3.9E-33 255.8 8.2 253 9-275 39-310 (312)
214 2clq_A Mitogen-activated prote 99.9 1.7E-27 5.7E-32 245.3 16.8 172 533-723 23-195 (295)
215 1phk_A Phosphorylase kinase; g 99.9 1.3E-27 4.4E-32 246.5 15.9 171 530-723 15-195 (298)
216 3op5_A Serine/threonine-protei 99.9 4.3E-28 1.5E-32 257.4 12.7 184 530-724 33-234 (364)
217 3brb_A Proto-oncogene tyrosine 99.9 3.1E-28 1.1E-32 253.1 11.2 188 527-723 29-221 (313)
218 1rjb_A FL cytokine receptor; k 99.9 6.7E-28 2.3E-32 254.1 13.8 180 530-723 43-246 (344)
219 4aaa_A Cyclin-dependent kinase 99.9 7.4E-28 2.5E-32 252.2 13.8 172 531-724 24-197 (331)
220 1k9a_A Carboxyl-terminal SRC k 99.9 1.1E-27 3.6E-32 261.3 15.6 168 530-723 191-358 (450)
221 3kfa_A Tyrosine-protein kinase 99.9 4.9E-28 1.7E-32 248.4 12.2 174 530-723 11-184 (288)
222 3a7i_A MST3 kinase, serine/thr 99.9 1.7E-27 5.8E-32 246.3 16.3 170 532-724 22-192 (303)
223 2j7t_A Serine/threonine-protei 99.9 3.4E-28 1.2E-32 251.4 11.0 173 530-723 17-189 (302)
224 1mp8_A Focal adhesion kinase 1 99.9 4.9E-28 1.7E-32 247.3 11.9 172 531-723 14-189 (281)
225 2b9h_A MAP kinase FUS3, mitoge 99.9 1.3E-27 4.4E-32 252.9 15.1 182 531-723 10-194 (353)
226 2a19_B Interferon-induced, dou 99.9 6.2E-28 2.1E-32 247.0 12.3 174 530-723 9-193 (284)
227 3eqc_A Dual specificity mitoge 99.9 5.2E-28 1.8E-32 256.6 12.1 170 532-724 33-203 (360)
228 1zy4_A Serine/threonine-protei 99.9 9.9E-28 3.4E-32 247.9 13.9 186 530-724 4-203 (303)
229 2pvf_A Fibroblast growth facto 99.9 1.3E-27 4.6E-32 250.6 14.8 180 530-723 33-231 (334)
230 3f66_A Hepatocyte growth facto 99.9 1.2E-27 4.1E-32 246.8 14.2 177 531-723 24-204 (298)
231 1qcf_A Haematopoetic cell kina 99.9 7.3E-28 2.5E-32 263.1 12.9 173 529-723 185-357 (454)
232 2x7f_A TRAF2 and NCK-interacti 99.9 4.9E-28 1.7E-32 253.1 11.0 183 526-724 18-202 (326)
233 3c1x_A Hepatocyte growth facto 99.9 5.6E-28 1.9E-32 256.5 11.5 175 533-723 90-268 (373)
234 1t46_A HOMO sapiens V-KIT hard 99.9 9.1E-28 3.1E-32 249.5 12.9 180 530-723 21-219 (313)
235 1csn_A Casein kinase-1; phosph 99.9 2.3E-27 8E-32 244.6 15.8 177 531-724 9-191 (298)
236 3eb0_A Putative uncharacterize 99.9 1.2E-27 4.1E-32 255.7 14.1 177 529-724 4-214 (383)
237 3pg1_A Mitogen-activated prote 99.9 1.7E-27 5.7E-32 252.9 15.1 182 524-724 14-206 (362)
238 2zmd_A Dual specificity protei 99.9 1.1E-27 3.6E-32 256.2 13.6 169 532-723 56-228 (390)
239 3dbq_A Dual specificity protei 99.9 1E-27 3.5E-32 252.3 12.9 170 531-723 8-181 (343)
240 2w1i_A JAK2; chromosomal rearr 99.9 1.8E-27 6.1E-32 248.7 14.4 177 531-723 40-220 (326)
241 3lm5_A Serine/threonine-protei 99.9 1.7E-27 5.7E-32 249.0 13.9 179 525-724 21-206 (327)
242 2fst_X Mitogen-activated prote 99.9 7.6E-28 2.6E-32 255.0 11.2 172 531-724 28-202 (367)
243 3com_A Serine/threonine-protei 99.9 3.3E-27 1.1E-31 245.5 15.7 171 530-723 27-197 (314)
244 3t9t_A Tyrosine-protein kinase 99.9 2E-27 6.9E-32 240.8 13.7 171 531-723 7-177 (267)
245 3byv_A Rhoptry kinase; malaria 99.9 3.1E-28 1.1E-32 259.7 7.9 177 531-723 72-274 (377)
246 2wtk_C Serine/threonine-protei 99.9 4.2E-27 1.4E-31 243.5 16.1 176 531-723 4-183 (305)
247 3dtc_A Mitogen-activated prote 99.9 2.2E-27 7.5E-32 241.2 13.7 169 531-723 6-186 (271)
248 2ycf_A Serine/threonine-protei 99.9 1.4E-27 4.7E-32 249.2 12.5 169 531-723 9-188 (322)
249 3lzb_A Epidermal growth factor 99.9 1.4E-27 4.9E-32 249.3 12.5 173 531-723 14-191 (327)
250 2xir_A Vascular endothelial gr 99.9 7.9E-28 2.7E-32 250.3 10.6 188 523-723 18-222 (316)
251 1p4o_A Insulin-like growth fac 99.9 5.2E-28 1.8E-32 252.4 9.2 184 526-723 19-212 (322)
252 3nsz_A CK II alpha, casein kin 99.9 4.8E-27 1.6E-31 246.0 16.3 167 531-724 35-203 (330)
253 1mqb_A Ephrin type-A receptor 99.9 1.8E-27 6.3E-32 249.2 13.1 174 532-723 44-222 (333)
254 2buj_A Serine/threonine-protei 99.9 3.3E-27 1.1E-31 245.7 15.0 188 531-724 28-216 (317)
255 2xrw_A Mitogen-activated prote 99.9 3E-27 1E-31 251.5 14.9 173 531-724 24-199 (371)
256 3kmu_A ILK, integrin-linked ki 99.9 1.9E-27 6.7E-32 241.5 12.8 168 531-723 9-180 (271)
257 2r3i_A Cell division protein k 99.9 2.5E-27 8.6E-32 244.4 13.7 172 531-723 2-175 (299)
258 3pls_A Macrophage-stimulating 99.9 3.4E-27 1.2E-31 243.4 14.5 175 533-723 22-200 (298)
259 3og7_A AKAP9-BRAF fusion prote 99.9 1.7E-27 5.8E-32 244.4 12.1 172 530-724 22-195 (289)
260 2z62_A TOLL-like receptor 4, v 99.9 1.2E-26 4E-31 236.3 18.2 214 4-252 21-239 (276)
261 3gxj_A TGF-beta receptor type- 99.9 3.3E-28 1.1E-32 251.6 6.7 172 532-723 3-184 (303)
262 3ll6_A Cyclin G-associated kin 99.9 2.6E-27 9E-32 248.7 13.7 186 531-723 27-222 (337)
263 3cc6_A Protein tyrosine kinase 99.9 2.2E-27 7.6E-32 242.5 12.7 173 530-723 10-186 (281)
264 2v62_A Serine/threonine-protei 99.9 1.9E-27 6.7E-32 250.4 12.5 181 531-723 36-232 (345)
265 2wqm_A Serine/threonine-protei 99.9 4.2E-27 1.4E-31 244.2 14.7 176 530-723 30-208 (310)
266 2z62_A TOLL-like receptor 4, v 99.9 1.6E-26 5.4E-31 235.4 18.7 226 17-298 11-237 (276)
267 3mdy_A Bone morphogenetic prot 99.9 6.3E-27 2.2E-31 245.9 16.2 179 529-724 34-219 (337)
268 1qpc_A LCK kinase; alpha beta 99.9 4E-27 1.4E-31 240.3 14.2 171 531-723 12-182 (279)
269 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 1.7E-27 5.9E-32 259.8 12.1 172 530-723 182-353 (452)
270 2w5a_A Serine/threonine-protei 99.9 1.1E-27 3.8E-32 244.5 10.0 177 531-723 5-188 (279)
271 2i6l_A Mitogen-activated prote 99.9 5E-27 1.7E-31 244.7 14.9 177 531-723 10-196 (320)
272 4azs_A Methyltransferase WBDD; 99.9 4.7E-28 1.6E-32 269.9 7.6 159 540-723 242-411 (569)
273 2i1m_A Macrophage colony-stimu 99.9 2E-27 6.7E-32 249.3 11.9 183 527-723 41-238 (333)
274 2vwi_A Serine/threonine-protei 99.9 1E-27 3.4E-32 248.0 9.1 185 528-723 11-198 (303)
275 2yfx_A Tyrosine-protein kinase 99.9 2.7E-27 9.2E-32 247.5 12.3 179 531-723 29-217 (327)
276 2eva_A TAK1 kinase - TAB1 chim 99.9 4.6E-27 1.6E-31 243.2 13.8 169 531-724 7-176 (307)
277 1u59_A Tyrosine-protein kinase 99.9 5.5E-27 1.9E-31 240.4 14.2 173 532-723 9-185 (287)
278 1xbb_A Tyrosine-protein kinase 99.9 4.4E-27 1.5E-31 241.6 13.5 173 531-723 15-192 (291)
279 1fvr_A Tyrosine-protein kinase 99.9 4.1E-27 1.4E-31 246.1 13.4 175 532-723 25-213 (327)
280 1j1b_A Glycogen synthase kinas 99.9 2.8E-27 9.6E-32 255.6 12.4 174 532-724 54-229 (420)
281 4fl3_A Tyrosine-protein kinase 99.9 3.7E-27 1.2E-31 266.8 13.4 166 538-723 375-544 (635)
282 3lxp_A Non-receptor tyrosine-p 99.9 5.8E-27 2E-31 243.8 13.7 172 534-723 33-209 (318)
283 2ozo_A Tyrosine-protein kinase 99.9 5.1E-27 1.7E-31 265.0 14.2 166 539-723 343-511 (613)
284 2pml_X PFPK7, Ser/Thr protein 99.9 4.8E-27 1.6E-31 248.0 13.2 170 531-724 30-223 (348)
285 3e3p_A Protein kinase, putativ 99.9 9E-27 3.1E-31 247.1 14.9 184 525-724 16-204 (360)
286 2wei_A Calmodulin-domain prote 99.9 1E-26 3.5E-31 238.4 14.7 172 529-723 19-195 (287)
287 4hgt_A Casein kinase I isoform 99.9 9E-27 3.1E-31 239.9 14.4 179 530-724 7-188 (296)
288 3kvw_A DYRK2, dual specificity 99.9 9.1E-27 3.1E-31 252.2 14.9 169 531-724 96-272 (429)
289 3uzp_A CKI-delta, CKID, casein 99.9 1.4E-26 4.7E-31 238.6 15.2 178 531-724 8-188 (296)
290 1byg_A CSK, protein (C-termina 99.9 3.9E-27 1.3E-31 240.3 10.7 167 531-723 20-186 (278)
291 2h8h_A Proto-oncogene tyrosine 99.9 3.5E-27 1.2E-31 262.6 11.0 173 529-723 264-436 (535)
292 1b6c_B TGF-B superfamily recep 99.9 2.2E-26 7.5E-31 242.3 16.5 177 528-724 38-224 (342)
293 3fme_A Dual specificity mitoge 99.9 8.2E-27 2.8E-31 239.4 13.0 174 531-723 6-181 (290)
294 4exu_A Mitogen-activated prote 99.9 1E-26 3.5E-31 247.3 13.9 171 531-724 41-214 (371)
295 3an0_A Dual specificity mitoge 99.9 9.3E-27 3.2E-31 244.9 13.3 174 531-723 50-225 (340)
296 1blx_A Cyclin-dependent kinase 99.9 9.8E-27 3.4E-31 243.2 13.4 178 530-724 9-192 (326)
297 4e7w_A Glycogen synthase kinas 99.9 8E-27 2.7E-31 249.9 12.7 174 531-724 39-214 (394)
298 3q60_A ROP5B; pseudokinase, tr 99.9 5.1E-27 1.7E-31 249.8 10.8 173 531-724 61-264 (371)
299 2jii_A Serine/threonine-protei 99.9 4.4E-27 1.5E-31 248.5 10.2 175 532-724 42-241 (352)
300 3rgf_A Cyclin-dependent kinase 99.9 1E-26 3.5E-31 250.5 13.0 178 533-724 21-208 (405)
301 2o6q_A Variable lymphocyte rec 99.9 1.9E-25 6.4E-30 226.5 21.3 203 14-251 17-219 (270)
302 2iwi_A Serine/threonine-protei 99.9 5.5E-27 1.9E-31 243.5 9.6 173 527-723 26-210 (312)
303 3sv0_A Casein kinase I-like; t 99.9 2.9E-26 9.8E-31 250.3 15.5 177 531-724 6-186 (483)
304 2pzi_A Probable serine/threoni 99.9 1.1E-26 3.9E-31 266.5 12.6 168 532-723 80-249 (681)
305 3a99_A Proto-oncogene serine/t 99.9 1.1E-26 3.8E-31 241.9 11.0 171 529-723 40-220 (320)
306 3coi_A Mitogen-activated prote 99.9 2.1E-26 7.2E-31 243.4 13.1 171 531-724 23-196 (353)
307 2o6q_A Variable lymphocyte rec 99.9 2.7E-25 9.1E-30 225.4 20.3 191 4-203 30-220 (270)
308 1u46_A ACK-1, activated CDC42 99.9 1.2E-26 4.2E-31 238.3 10.4 174 531-723 17-196 (291)
309 3qa8_A MGC80376 protein; kinas 99.9 1.9E-26 6.4E-31 256.9 12.1 179 531-724 13-196 (676)
310 1wak_A Serine/threonine-protei 99.9 2.8E-26 9.6E-31 246.8 13.1 174 531-724 36-266 (397)
311 3fhr_A MAP kinase-activated pr 99.9 5.2E-26 1.8E-30 238.4 14.6 172 530-723 26-201 (336)
312 2j0j_A Focal adhesion kinase 1 99.9 3.1E-26 1.1E-30 260.2 13.6 173 530-723 388-564 (656)
313 1z57_A Dual specificity protei 99.9 4.1E-26 1.4E-30 239.8 13.5 169 531-724 13-207 (339)
314 1p9a_G Platelet glycoprotein I 99.9 2.6E-25 8.9E-30 227.4 19.0 187 9-209 6-192 (290)
315 3aln_A Dual specificity mitoge 99.9 7.7E-26 2.6E-30 236.5 14.4 175 531-723 21-197 (327)
316 2p1m_B Transport inhibitor res 99.9 4E-29 1.4E-33 284.0 -11.9 404 9-430 62-519 (594)
317 2y4i_B KSR2, HKSR2, kinase sup 99.9 8.1E-27 2.8E-31 243.0 6.3 180 525-724 26-207 (319)
318 2p1m_B Transport inhibitor res 99.9 3.2E-28 1.1E-32 276.5 -5.1 411 15-451 45-517 (594)
319 2xwt_C Thyrotropin receptor; s 99.9 1.6E-25 5.6E-30 222.6 15.0 196 38-247 32-236 (239)
320 3rfs_A Internalin B, repeat mo 99.9 1.6E-25 5.5E-30 227.1 15.2 229 13-262 19-247 (272)
321 2vx3_A Dual specificity tyrosi 99.9 1E-25 3.5E-30 240.7 14.2 173 529-724 51-231 (382)
322 3cek_A Dual specificity protei 99.9 8.2E-26 2.8E-30 234.7 12.0 173 528-723 24-200 (313)
323 3rfs_A Internalin B, repeat mo 99.9 1.3E-25 4.4E-30 227.9 12.5 228 38-286 20-247 (272)
324 1p9a_G Platelet glycoprotein I 99.9 9.8E-25 3.4E-29 223.1 18.8 206 184-433 6-211 (290)
325 2dyl_A Dual specificity mitoge 99.9 1.5E-25 5.2E-30 233.3 12.6 170 531-723 24-196 (318)
326 3goz_A Leucine-rich repeat-con 99.9 1.5E-26 5.2E-31 245.1 4.9 256 17-299 2-298 (362)
327 2eu9_A Dual specificity protei 99.9 2.1E-25 7.1E-30 236.1 13.7 169 531-724 18-212 (355)
328 2xwt_C Thyrotropin receptor; s 99.9 4.6E-25 1.6E-29 219.4 14.6 211 43-295 17-236 (239)
329 2rio_A Serine/threonine-protei 99.9 9.3E-26 3.2E-30 244.8 10.2 173 534-723 17-204 (434)
330 1q8y_A SR protein kinase; tran 99.9 1.3E-25 4.5E-30 239.4 11.2 173 531-723 18-207 (373)
331 3p23_A Serine/threonine-protei 99.9 2.3E-25 7.9E-30 240.9 12.3 170 532-724 24-199 (432)
332 3en9_A Glycoprotease, O-sialog 99.9 7.7E-25 2.6E-29 242.7 12.7 162 535-723 339-508 (540)
333 3m19_A Variable lymphocyte rec 99.9 7.6E-24 2.6E-28 212.1 18.7 181 13-203 14-194 (251)
334 3goz_A Leucine-rich repeat-con 99.9 1E-25 3.5E-30 238.8 3.7 273 41-342 2-305 (362)
335 4ay9_X Follicle-stimulating ho 99.9 3.9E-24 1.3E-28 225.4 15.3 250 6-295 3-256 (350)
336 3uqc_A Probable conserved tran 99.9 3.8E-24 1.3E-28 218.5 14.7 144 532-691 31-177 (286)
337 3m19_A Variable lymphocyte rec 99.9 1.8E-23 6E-28 209.5 17.1 168 3-173 27-194 (251)
338 3m2w_A MAP kinase-activated pr 99.9 9.6E-24 3.3E-28 217.5 15.3 151 531-694 16-171 (299)
339 4glp_A Monocyte differentiatio 99.9 5.5E-24 1.9E-28 220.3 12.6 232 37-298 64-307 (310)
340 1h6u_A Internalin H; cell adhe 99.9 8.1E-24 2.8E-28 218.5 13.6 214 12-275 18-231 (308)
341 3dzo_A Rhoptry kinase domain; 99.9 2.4E-24 8.2E-29 232.0 9.8 176 532-723 78-279 (413)
342 1h6u_A Internalin H; cell adhe 99.9 2E-23 6.7E-28 215.6 16.0 195 9-251 37-231 (308)
343 4ay9_X Follicle-stimulating ho 99.9 1.4E-23 4.8E-28 221.1 15.2 231 3-272 22-257 (350)
344 4glp_A Monocyte differentiatio 99.9 3.1E-23 1E-27 214.7 16.4 226 188-430 64-307 (310)
345 1zar_A RIO2 kinase; serine kin 99.9 1.7E-23 5.8E-28 212.5 12.0 140 526-692 84-241 (282)
346 2ca6_A RAN GTPase-activating p 99.9 2.4E-25 8E-30 238.4 -3.7 260 15-298 11-316 (386)
347 2o6s_A Variable lymphocyte rec 99.9 8E-23 2.7E-27 198.5 13.4 181 15-212 9-189 (208)
348 2ca6_A RAN GTPase-activating p 99.9 2.1E-24 7.3E-29 230.9 1.4 250 4-277 23-319 (386)
349 2ast_B S-phase kinase-associat 99.9 7.9E-24 2.7E-28 222.1 4.4 223 14-247 48-282 (336)
350 2o6s_A Variable lymphocyte rec 99.9 1.2E-21 4.1E-26 190.1 15.7 153 39-201 9-161 (208)
351 2ast_B S-phase kinase-associat 99.9 3E-23 1E-27 217.7 4.3 225 39-295 49-282 (336)
352 2v9t_B SLIT homolog 2 protein 99.9 1.6E-21 5.3E-26 190.7 15.1 153 15-171 13-165 (220)
353 2xot_A Amphoterin-induced prot 99.9 1.5E-21 5.2E-26 206.3 13.1 156 15-174 20-179 (361)
354 3cvr_A Invasion plasmid antige 99.9 4E-21 1.4E-25 212.7 16.1 194 14-260 60-253 (571)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 7.7E-21 2.6E-25 185.8 15.1 153 15-171 13-166 (220)
356 1h6t_A Internalin B; cell adhe 99.8 5.2E-21 1.8E-25 195.6 13.3 169 12-201 45-213 (291)
357 2xot_A Amphoterin-induced prot 99.8 4E-21 1.4E-25 203.1 12.2 165 4-171 32-202 (361)
358 1h6t_A Internalin B; cell adhe 99.8 3.6E-21 1.2E-25 196.8 10.6 169 12-201 23-191 (291)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 6.5E-21 2.2E-25 186.3 11.2 158 240-436 14-172 (220)
360 2v9t_B SLIT homolog 2 protein 99.8 1.8E-20 6.2E-25 183.1 13.6 142 4-148 25-166 (220)
361 3e6j_A Variable lymphocyte rec 99.8 4E-20 1.4E-24 182.0 15.7 152 15-171 21-172 (229)
362 3cvr_A Invasion plasmid antige 99.8 3.1E-20 1.1E-24 205.6 15.3 196 38-286 60-255 (571)
363 1m9s_A Internalin B; cell inva 99.8 1.9E-20 6.6E-25 209.7 13.8 193 12-228 20-212 (605)
364 1xeu_A Internalin C; cellular 99.8 5.8E-21 2E-25 192.1 7.7 171 11-203 17-187 (263)
365 3e6j_A Variable lymphocyte rec 99.8 1E-19 3.5E-24 179.1 14.8 143 3-149 32-174 (229)
366 1m9s_A Internalin B; cell inva 99.8 4.5E-20 1.6E-24 206.6 13.8 172 10-202 40-211 (605)
367 3sb4_A Hypothetical leucine ri 99.8 1.9E-20 6.5E-25 195.4 9.4 275 3-291 13-327 (329)
368 1zth_A RIO1 serine protein kin 99.8 4E-20 1.4E-24 185.4 10.2 138 533-693 48-219 (258)
369 4ezg_A Putative uncharacterize 99.8 2.6E-19 8.8E-24 171.9 12.0 153 34-201 41-194 (197)
370 1w8a_A SLIT protein; signaling 99.8 1.5E-19 5.1E-24 172.6 9.5 137 324-460 32-169 (192)
371 3sb4_A Hypothetical leucine ri 99.8 6E-20 2.1E-24 191.6 5.9 286 35-376 23-328 (329)
372 1xeu_A Internalin C; cellular 99.8 1.3E-19 4.4E-24 182.2 7.8 103 36-148 18-120 (263)
373 1dce_A Protein (RAB geranylger 99.8 7.4E-21 2.5E-25 211.8 -2.8 204 185-435 346-551 (567)
374 1dce_A Protein (RAB geranylger 99.8 1.4E-21 4.7E-26 217.7 -8.8 204 58-292 346-567 (567)
375 4fdw_A Leucine rich hypothetic 99.8 1.3E-17 4.5E-22 177.5 21.7 245 13-297 113-357 (401)
376 4b8c_D Glucose-repressible alc 99.8 1.7E-19 5.9E-24 207.2 6.7 162 68-247 208-369 (727)
377 4ezg_A Putative uncharacterize 99.8 5.2E-19 1.8E-23 169.8 8.9 153 10-171 41-194 (197)
378 2ell_A Acidic leucine-rich nuc 99.8 1.8E-18 6.3E-23 161.4 10.6 135 13-150 24-163 (168)
379 1w8a_A SLIT protein; signaling 99.7 5.1E-18 1.8E-22 161.9 12.7 130 15-148 10-140 (192)
380 4fdw_A Leucine rich hypothetic 99.7 5E-17 1.7E-21 173.0 20.5 247 8-298 131-383 (401)
381 2wfh_A SLIT homolog 2 protein 99.7 3.7E-18 1.3E-22 162.9 9.7 136 324-460 34-169 (193)
382 4fs7_A Uncharacterized protein 99.7 1.1E-16 3.8E-21 171.2 21.4 333 25-420 59-391 (394)
383 4b8c_D Glucose-repressible alc 99.7 1.2E-18 4.2E-23 200.1 5.5 181 228-430 215-404 (727)
384 2wfh_A SLIT homolog 2 protein 99.7 1.9E-17 6.4E-22 157.9 12.4 127 16-147 13-139 (193)
385 2je0_A Acidic leucine-rich nuc 99.7 9.1E-18 3.1E-22 153.2 9.3 127 13-142 17-148 (149)
386 2ell_A Acidic leucine-rich nuc 99.7 1.3E-17 4.5E-22 155.5 9.5 137 35-174 22-163 (168)
387 2o6r_A Variable lymphocyte rec 99.7 6E-17 2.1E-21 152.4 13.7 131 15-149 9-139 (177)
388 4fs7_A Uncharacterized protein 99.7 1.4E-15 4.8E-20 162.6 24.2 328 8-398 66-393 (394)
389 2je0_A Acidic leucine-rich nuc 99.7 3.8E-17 1.3E-21 149.1 8.6 129 35-166 15-148 (149)
390 2o6r_A Variable lymphocyte rec 99.7 2E-16 6.7E-21 148.9 13.2 129 38-170 8-136 (177)
391 1a9n_A U2A', U2A'; complex (nu 99.7 5.9E-17 2E-21 152.3 9.0 135 9-147 15-153 (176)
392 4gyi_A RIO2 kinase; protein ki 99.7 2.5E-17 8.7E-22 170.7 6.5 139 529-692 92-264 (397)
393 1a9n_A U2A', U2A'; complex (nu 99.7 9.3E-17 3.2E-21 150.9 7.7 135 31-170 13-152 (176)
394 1ds9_A Outer arm dynein; leuci 99.6 3.5E-18 1.2E-22 164.1 -6.4 137 9-151 14-157 (198)
395 4gt6_A Cell surface protein; l 99.6 1.1E-13 3.6E-18 148.0 23.4 335 25-428 51-389 (394)
396 3g39_A Variable lymphocyte rec 99.6 7.8E-15 2.7E-19 136.7 10.9 105 40-148 12-116 (170)
397 3g39_A Variable lymphocyte rec 99.6 1E-14 3.6E-19 135.8 11.4 108 14-125 10-117 (170)
398 2r9u_A Variable lymphocyte rec 99.6 1.3E-14 4.4E-19 135.6 11.3 105 40-148 15-119 (174)
399 1ds9_A Outer arm dynein; leuci 99.6 7E-17 2.4E-21 154.9 -4.4 140 1-148 30-186 (198)
400 2r9u_A Variable lymphocyte rec 99.5 2E-14 6.8E-19 134.3 11.6 107 15-125 14-120 (174)
401 4gt6_A Cell surface protein; l 99.5 1.1E-12 3.7E-17 140.2 24.8 329 9-406 59-391 (394)
402 2ifg_A High affinity nerve gro 99.4 2.4E-13 8.3E-18 142.6 9.3 105 16-124 11-117 (347)
403 2ifg_A High affinity nerve gro 99.4 2.8E-13 9.6E-18 142.2 8.6 131 325-458 12-146 (347)
404 3un9_A NLR family member X1; l 99.4 3.8E-15 1.3E-19 156.9 -6.6 67 133-201 125-196 (372)
405 3un9_A NLR family member X1; l 99.4 4.3E-15 1.5E-19 156.6 -6.8 170 37-209 72-260 (372)
406 4h09_A Hypothetical leucine ri 99.3 7.3E-11 2.5E-15 125.3 21.4 147 253-416 209-355 (379)
407 3tm0_A Aminoglycoside 3'-phosp 99.3 9.3E-12 3.2E-16 124.9 11.4 149 526-692 8-213 (263)
408 4h09_A Hypothetical leucine ri 99.3 1.9E-10 6.4E-15 122.1 21.5 312 33-396 42-359 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.1 2.4E-10 8.3E-15 114.4 9.3 138 533-693 21-215 (264)
410 3dxp_A Putative acyl-COA dehyd 98.9 1.8E-09 6.3E-14 113.5 10.4 144 537-692 43-248 (359)
411 2ra8_A Uncharacterized protein 98.9 2.7E-10 9.1E-15 118.8 1.9 185 12-202 106-321 (362)
412 2ra8_A Uncharacterized protein 98.9 3.6E-10 1.2E-14 117.8 2.6 180 7-199 133-341 (362)
413 3rw6_A Nuclear RNA export fact 98.6 5.1E-09 1.7E-13 103.3 0.7 81 59-140 168-257 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.6 1.3E-07 4.3E-12 96.8 9.9 140 537-693 25-224 (304)
415 3r70_A Aminoglycoside phosphot 98.6 3.2E-07 1.1E-11 94.5 12.6 137 533-693 38-238 (320)
416 3rw6_A Nuclear RNA export fact 98.5 3.8E-08 1.3E-12 97.0 4.0 80 342-423 167-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.5 1.2E-08 4.3E-13 95.7 0.2 118 30-147 29-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.5 9.4E-09 3.2E-13 96.6 -0.9 117 7-123 30-164 (185)
419 3tdw_A Gentamicin resistance p 98.4 1.5E-06 5E-11 88.8 12.5 138 537-693 24-225 (306)
420 3d1u_A Putative fructosamine-3 98.4 9.8E-07 3.4E-11 88.9 10.3 76 536-621 19-97 (288)
421 4gkh_A Aminoglycoside 3'-phosp 98.4 1.7E-06 5.9E-11 86.6 11.4 136 539-692 31-223 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.9E-06 1.7E-10 86.9 11.1 76 536-622 45-122 (362)
423 3ats_A Putative uncharacterize 98.1 5.3E-06 1.8E-10 86.8 8.4 83 538-622 26-121 (357)
424 2olc_A MTR kinase, methylthior 98.0 1.2E-05 3.9E-10 85.5 10.1 76 537-619 35-120 (397)
425 3e4g_A ATP synthase subunit S, 98.0 1.3E-06 4.4E-11 79.8 1.1 84 37-121 61-150 (176)
426 3e4g_A ATP synthase subunit S, 97.9 3.1E-06 1.1E-10 77.2 2.7 93 54-147 54-153 (176)
427 2q83_A YTAA protein; 2635576, 97.6 0.00046 1.6E-08 71.3 13.6 44 649-692 199-252 (346)
428 3jr1_A Putative fructosamine-3 97.6 0.00027 9.4E-09 71.6 11.0 141 537-688 41-232 (312)
429 3f7w_A Putative fructosamine-3 97.5 0.00033 1.1E-08 70.5 10.6 77 534-620 17-96 (288)
430 3rfe_A Platelet glycoprotein I 97.5 0.00015 5.3E-09 62.9 6.1 62 372-435 11-73 (130)
431 2pyw_A Uncharacterized protein 97.4 0.00038 1.3E-08 74.3 10.1 32 661-693 231-262 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.3 3.2E-05 1.1E-09 71.9 0.1 19 80-98 36-55 (197)
433 1pgv_A TMD-1, tropomodulin TMD 97.3 0.00016 5.3E-09 67.3 3.8 117 31-147 35-170 (197)
434 3rfe_A Platelet glycoprotein I 97.2 0.00058 2E-08 59.2 6.6 35 63-97 33-67 (130)
435 3dxq_A Choline/ethanolamine ki 97.1 0.0013 4.5E-08 66.5 9.7 73 535-621 21-95 (301)
436 1zyl_A Hypothetical protein YI 96.7 0.0085 2.9E-07 61.3 12.0 166 520-692 9-223 (328)
437 3csv_A Aminoglycoside phosphot 96.7 0.01 3.5E-07 60.8 12.4 32 661-692 182-217 (333)
438 2qg7_A Ethanolamine kinase PV0 96.7 0.0048 1.6E-07 66.0 10.0 73 538-620 114-187 (458)
439 1nw1_A Choline kinase (49.2 KD 96.7 0.0033 1.1E-07 67.0 8.7 72 538-620 79-158 (429)
440 2ppq_A HSK, HK, homoserine kin 96.6 0.021 7.1E-07 58.1 14.0 168 521-692 6-217 (322)
441 3feg_A Choline/ethanolamine ki 96.6 0.0048 1.6E-07 64.2 9.0 145 538-692 56-254 (379)
442 3c5i_A Choline kinase; choline 96.2 0.013 4.5E-07 61.0 9.2 73 538-620 39-120 (369)
443 3i1a_A Spectinomycin phosphotr 95.8 0.022 7.4E-07 58.5 8.7 31 662-692 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.1 0.046 1.6E-06 57.0 8.2 31 662-692 244-280 (401)
445 3mes_A Choline kinase; malaria 94.2 0.067 2.3E-06 56.4 6.9 73 538-620 76-156 (424)
446 3g15_A CK, chetk-alpha, cholin 91.0 0.45 1.5E-05 49.8 8.0 29 664-692 246-280 (401)
447 3cxl_A N-chimerin; SH2, RHO-GA 85.6 0.1 3.4E-06 55.9 -1.6 62 536-600 146-215 (463)
448 4ann_A ESSB; membrane protein, 77.4 3.3 0.00011 38.4 5.7 53 636-693 77-129 (215)
449 4ano_A ESSB; membrane protein, 76.2 3.2 0.00011 38.7 5.3 53 636-693 81-134 (219)
450 2lz0_A Uncharacterized protein 68.9 7.2 0.00025 31.3 5.2 12 81-92 16-27 (100)
451 2jwa_A Receptor tyrosine-prote 67.2 2.3 8E-05 28.0 1.5 9 497-505 32-40 (44)
452 2lz0_A Uncharacterized protein 65.9 11 0.00037 30.2 5.7 49 46-95 5-53 (100)
453 2l2t_A Receptor tyrosine-prote 49.5 18 0.00062 23.8 3.4 6 498-503 32-37 (44)
454 2yle_A Protein spire homolog 1 25.6 1.1E+02 0.0037 28.4 5.8 60 620-686 34-93 (229)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-58 Score=540.61 Aligned_cols=447 Identities=33% Similarity=0.536 Sum_probs=302.1
Q ss_pred cccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccC----------------------CCCCCC
Q 048668 2 EGQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKF----------------------PTTLGL 59 (725)
Q Consensus 2 ~~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----------------------~~~~~~ 59 (725)
++.+|. +.++++|++|+|++|.+++.+|..|..+++|++|++++|++.+.. |..+..
T Consensus 213 ~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~ 291 (768)
T 3rgz_A 213 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSG 291 (768)
T ss_dssp CSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCT
T ss_pred CCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHh
Confidence 345565 777777777777777777777777777777777777777666544 444433
Q ss_pred C-CCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccC-ccc
Q 048668 60 L-RNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNAS-NLE 137 (725)
Q Consensus 60 l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~ 137 (725)
. ++|++|+|++|++++..|..|+++++|++|+|++|++++.+|...+.++++|++|+|++|++++..|..+..++ +|+
T Consensus 292 ~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~ 371 (768)
T 3rgz_A 292 ACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371 (768)
T ss_dssp TCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCS
T ss_pred hcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCc
Confidence 2 55555555555555555555555555555555555555555555455555555555555555555555555544 555
Q ss_pred eecCCCccccccCccCccc--ccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccc
Q 048668 138 LLDLSNNQFKGKVSIDFSS--LKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTM 215 (725)
Q Consensus 138 ~L~Ls~N~i~~~~~~~f~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l 215 (725)
+|+|++|++++..+..+.. +++|++|++++|.++... +..+.++++|++|++++|++++.+|..+..++ +|
T Consensus 372 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L 444 (768)
T 3rgz_A 372 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI------PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KL 444 (768)
T ss_dssp EEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC------CGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TC
T ss_pred EEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc------CHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CC
Confidence 5555555554433333333 444555555555444222 13455566666666666666666666666655 56
Q ss_pred eeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCC
Q 048668 216 IVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSN 295 (725)
Q Consensus 216 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 295 (725)
+.|++++|.+.+.+|..+..+++|++|++++|++.+.+|.++..+++|++|+|++|++.+.+|.++..+++|++|++++|
T Consensus 445 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 524 (768)
T 3rgz_A 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred CEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cCCCccccccccccccccccccccccccceecccCCccCCCcc-------------------------------------
Q 048668 296 SLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLP------------------------------------- 338 (725)
Q Consensus 296 ~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~------------------------------------- 338 (725)
+++ +.+|..+..+..+ ++|++++|+++|.+|
T Consensus 525 ~l~-----------~~~p~~l~~l~~L-~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 525 SFS-----------GNIPAELGDCRSL-IWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp CCE-----------EECCGGGGGCTTC-CEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred ccc-----------CcCCHHHcCCCCC-CEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 444 4555555554444 555555555554444
Q ss_pred ---------------------------------hhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCcccccc
Q 048668 339 ---------------------------------QQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGII 385 (725)
Q Consensus 339 ---------------------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 385 (725)
..++.+++|+.|||++|+++|.+|.+++.+++|+.|+|++|+++|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 44555688999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCCCCCCCCCC
Q 048668 386 PPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGIDELHLPSC 465 (725)
Q Consensus 386 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~c 465 (725)
|..|+.+++|+.||||+|+++|.+|..+..+++|++|||++|+++|.+|..+.+..+....+.||+++||.+.. .|
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~----~C 748 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP----RC 748 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC----CC
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc----CC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999998742 57
Q ss_pred CCCCCcc
Q 048668 466 PSRGSRK 472 (725)
Q Consensus 466 ~~~~~~~ 472 (725)
.......
T Consensus 749 ~~~~~~~ 755 (768)
T 3rgz_A 749 DPSNADG 755 (768)
T ss_dssp CSCC---
T ss_pred CCCccCC
Confidence 6544443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.7e-54 Score=501.62 Aligned_cols=439 Identities=33% Similarity=0.534 Sum_probs=336.8
Q ss_pred ccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCc
Q 048668 9 IGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLE 88 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 88 (725)
+..+++|++|+|++|++++.+|. |+.+++|++|++++|++++..|..|+.+++|++|+|++|++++..|.. .+++|+
T Consensus 196 ~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~ 272 (768)
T 3rgz_A 196 VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQ 272 (768)
T ss_dssp CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCC
T ss_pred cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCC
Confidence 37899999999999999987877 999999999999999999999999999999999999999999877765 889999
Q ss_pred eeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccc-cCccCcccccccCeeecCC
Q 048668 89 YFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKG-KVSIDFSSLKILWRLNLEQ 167 (725)
Q Consensus 89 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~f~~l~~L~~L~L~~ 167 (725)
+|+|++|++++.+|..++..+++|++|+|++|++++..|..|+++++|++|+|++|++++ ++...|..+++|++|++++
T Consensus 273 ~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~ 352 (768)
T 3rgz_A 273 YLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 352 (768)
T ss_dssp EEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCS
T ss_pred EEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcC
Confidence 999999999888888776666999999999999999999999999999999999999984 4444588899999999999
Q ss_pred ccCCccCCCCcccccccCCCC-CCCEEECccCcccccCChhhhh--ccccceeEEecCccceeccCcccccccCCceEEe
Q 048668 168 NNLGIGAANDLGFVTFLTNCS-SLKVLSLSDNQFGGELPHSIAN--LSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAV 244 (725)
Q Consensus 168 N~l~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 244 (725)
|.++...+ ..+.+++ +|++|++++|++++.+|..+.. ++ .++.|++++|.+.+.+|..+.++++|++|++
T Consensus 353 n~l~~~~p------~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 425 (768)
T 3rgz_A 353 NEFSGELP------ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN-TLQELYLQNNGFTGKIPPTLSNCSELVSLHL 425 (768)
T ss_dssp SEEEECCC------TTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTC-CCCEEECCSSEEEEECCGGGGGCTTCCEEEC
T ss_pred CccCcccc------HHHHhhhcCCcEEEccCCCcCCCcChhhhhcccC-CccEEECCCCccccccCHHHhcCCCCCEEEC
Confidence 98863322 2233333 5555555555555544444443 22 4555555555555555555555555555555
Q ss_pred cccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccc-------------ccccccccc
Q 048668 245 EVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFI-------------ASQNKLIGA 311 (725)
Q Consensus 245 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-------------~~~~~~~~~ 311 (725)
++|++++.+|..|..+++|++|++++|.+.+.+|..+..+++|++|++++|++++..+ .++|.+.+.
T Consensus 426 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 505 (768)
T 3rgz_A 426 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505 (768)
T ss_dssp CSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred cCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCc
Confidence 5555555555555555555555555555555555555555555555555555443211 123355567
Q ss_pred ccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccccccCcccc--------------------------
Q 048668 312 LPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTL-------------------------- 365 (725)
Q Consensus 312 ~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-------------------------- 365 (725)
+|..+..+..+ ++|++++|++++.+|..++.+++|+.|++++|.++|.+|..+
T Consensus 506 ~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (768)
T 3rgz_A 506 IPKWIGRLENL-AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMK 584 (768)
T ss_dssp CCGGGGGCTTC-CEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCC
T ss_pred CChHHhcCCCC-CEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccc
Confidence 88888887777 899999999999999999999999999999999987777544
Q ss_pred --------------------------------------------ccccCCcEEEccCCccccccCccccCCCCCCEEeCC
Q 048668 366 --------------------------------------------STCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVS 401 (725)
Q Consensus 366 --------------------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 401 (725)
+.+++|++|||++|+++|.+|..|+.+++|+.|||+
T Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls 664 (768)
T 3rgz_A 585 KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 664 (768)
T ss_dssp TTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECC
T ss_pred ccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCc
Confidence 235678999999999999999999999999999999
Q ss_pred CCcccccCcccccCCCCCCeEEcccccCeeecCCC-CccCCCCCcCccCCccccCCCCC
Q 048668 402 CNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK-GVFSNKSKIPLQGNVRLCGGIDE 459 (725)
Q Consensus 402 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~~~ 459 (725)
+|+++|.+|..|+.+++|+.|||++|+++|.+|.. ..+..++.+++++|. +.|.+|.
T Consensus 665 ~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~-l~g~iP~ 722 (768)
T 3rgz_A 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN-LSGPIPE 722 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE-EEEECCS
T ss_pred CCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc-ccccCCC
Confidence 99999999999999999999999999999999875 557788899999985 5665543
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.2e-52 Score=475.28 Aligned_cols=447 Identities=23% Similarity=0.240 Sum_probs=324.2
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||+.++. ++++|+|++|.|++..|.+|+.+++|++|+|++|+++++.|.+|+++++|++|+|++|++++..|..|++
T Consensus 26 ~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 26 EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 46666655 5677777777777666666777777777777777776666777777777777777777776666666777
Q ss_pred cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccC--
Q 048668 84 ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILW-- 161 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~-- 161 (725)
+++|++|++++|+++ .++...|.++++|++|+|++|+++++....+..+++|++|+|++|+++++.+..|..+++|+
T Consensus 104 l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l 182 (606)
T 3t6q_A 104 PKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL 182 (606)
T ss_dssp CTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSE
T ss_pred cccccEeeccccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhccccee
Confidence 777777777777776 55444456666777777777776665444454566667777777666666666666666666
Q ss_pred eeecCCccCCccCCCCccc-------------------------------------------------------------
Q 048668 162 RLNLEQNNLGIGAANDLGF------------------------------------------------------------- 180 (725)
Q Consensus 162 ~L~L~~N~l~~~~~~~~~~------------------------------------------------------------- 180 (725)
.|++++|.++...+..+..
T Consensus 183 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~ 262 (606)
T 3t6q_A 183 SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262 (606)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECT
T ss_pred EEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEee
Confidence 5666666655443322110
Q ss_pred --------ccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCC
Q 048668 181 --------VTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT 252 (725)
Q Consensus 181 --------~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 252 (725)
+..|.++++|++|++++|+++ .+|..+..++ .|+.|++++|.+.+..|..+..+++|++|++++|.+.+.
T Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 340 (606)
T 3t6q_A 263 KHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLS-TLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLE 340 (606)
T ss_dssp TCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCT-TCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCB
T ss_pred cCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccc-cCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccc
Confidence 123566778888888888887 6777777776 788888888888877777777778888888888777644
Q ss_pred C-ChhhcCCCCccEEeccCcccccCC--CCCCcCCCCCCEEeCCCCcCCCccc-------------cccccccccccccc
Q 048668 253 I-PDVIGELKNLQLLGLYKNFLQGSI--PSGLGNLTKLAKLDLGSNSLQGNFI-------------ASQNKLIGALPQQL 316 (725)
Q Consensus 253 ~-~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~-------------~~~~~~~~~~p~~~ 316 (725)
+ +..+..+++|++|++++|.+.+.. +..+..+++|++|++++|++++... .+.|.+.+..|...
T Consensus 341 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 420 (606)
T 3t6q_A 341 LGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSP 420 (606)
T ss_dssp CCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCT
T ss_pred cchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchh
Confidence 3 345777777777777777777554 6667777777777777777654211 12344444555553
Q ss_pred cccccccceecccCCccCCCcchhhhcCCCCCeEEccCcccccc---CccccccccCCcEEEccCCccccccCccccCCC
Q 048668 317 LSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGM---IPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLK 393 (725)
Q Consensus 317 ~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 393 (725)
+.....+++|++++|.+++..|..+..+++|++|++++|.+++. .+..+..+++|++|+|++|++++..|..|+.++
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 33333448899999999988888899999999999999999863 336788899999999999999998899999999
Q ss_pred CCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC-CccCCCCCcCccCCccccCC
Q 048668 394 SIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK-GVFSNKSKIPLQGNVRLCGG 456 (725)
Q Consensus 394 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~ 456 (725)
+|+.|+|++|++++..|..+..++.| .|++++|++++.+|.. ..++.++.+++++|++.|..
T Consensus 501 ~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp TCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 99999999999999999999999999 9999999999887764 45678899999999998853
No 4
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-50 Score=462.17 Aligned_cols=432 Identities=21% Similarity=0.202 Sum_probs=326.4
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||+.+. +++++|+|++|.+++..+..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|++++..|..|++
T Consensus 25 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 102 (606)
T 3vq2_A 25 KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG 102 (606)
T ss_dssp SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTT
T ss_pred cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCC
Confidence 5677666 47888888888888767777888888888888888888777888888888888888888888777888888
Q ss_pred cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeee-CCCcccccCccceecCCCccccccCccCcccccccC-
Q 048668 84 ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILW- 161 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~- 161 (725)
+++|++|+|++|+++ .++...+.++++|++|+|++|.+++. .|..|+++++|++|+|++|+++++.+..|..+++|+
T Consensus 103 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 181 (606)
T 3vq2_A 103 LTSLENLVAVETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQ 181 (606)
T ss_dssp CTTCCEEECTTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTT
T ss_pred cccCCEEEccCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcccc
Confidence 888888888888887 66655567788888888888888753 477788888888888888888877777777666554
Q ss_pred ---eeecCCccCCccCCCCccc----------------------------------------------------------
Q 048668 162 ---RLNLEQNNLGIGAANDLGF---------------------------------------------------------- 180 (725)
Q Consensus 162 ---~L~L~~N~l~~~~~~~~~~---------------------------------------------------------- 180 (725)
+|++++|.++.++...+..
T Consensus 182 ~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l 261 (606)
T 3vq2_A 182 VNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV 261 (606)
T ss_dssp CCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGS
T ss_pred ccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhc
Confidence 5666666665443321100
Q ss_pred -----------------cc---------------------ccCCCCCCCEEECccCcccccCChhhhhccccceeEEecC
Q 048668 181 -----------------VT---------------------FLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGG 222 (725)
Q Consensus 181 -----------------~~---------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~ 222 (725)
+. .+..+++|++|++++|++ +.+| .+ .++ .++.|++++
T Consensus 262 ~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~-~L~~L~l~~ 337 (606)
T 3vq2_A 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFP-TL-DLP-FLKSLTLTM 337 (606)
T ss_dssp EEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCC-CC-CCS-SCCEEEEES
T ss_pred cHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccc-cC-CCC-ccceeeccC
Confidence 00 123334455555555555 2444 22 333 555555555
Q ss_pred ccceeccCcccccccCCceEEecccccCCC--CChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCc
Q 048668 223 NQISGTIPLGIRNLVNLIALAVEVNQLHGT--IPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGN 300 (725)
Q Consensus 223 n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 300 (725)
|...+.. .+..+++|++|++++|++++. .+..+..+++|++|++++|.+.+ +|..+..+++|++|++++|+++
T Consensus 338 n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~-- 412 (606)
T 3vq2_A 338 NKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLK-- 412 (606)
T ss_dssp CSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEE--
T ss_pred CcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccC--
Confidence 5443333 455677777777777777765 36777788888888888888774 5577778888888888888655
Q ss_pred ccccccccccccc-ccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccccc-cCccccccccCCcEEEccC
Q 048668 301 FIASQNKLIGALP-QQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSG-MIPVTLSTCVSLEYVDISS 378 (725)
Q Consensus 301 ~~~~~~~~~~~~p-~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~ 378 (725)
+..| ..+..+..+ ++|++++|.+++..|..+..+++|++|++++|.+++ .+|..|..+++|++|+|++
T Consensus 413 ---------~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 413 ---------RVTEFSAFLSLEKL-LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp ---------STTTTTTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred ---------CccChhhhhccccC-CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 2344 234445555 899999999998899999999999999999999997 4788999999999999999
Q ss_pred CccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCCCccC-CCCCcCccCCccccCCC
Q 048668 379 NCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFS-NKSKIPLQGNVRLCGGI 457 (725)
Q Consensus 379 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~~~~~~n~~~c~~~ 457 (725)
|++++..|..|+.+++|+.|+|++|++++..|..|..+++|++|||++|+++..++....++ .++.+++++|++.|...
T Consensus 483 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999999997766655555 58999999999999653
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-50 Score=460.71 Aligned_cols=415 Identities=19% Similarity=0.175 Sum_probs=317.3
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
-++++.++..++ .+|..+.. ++++|+|++|+++++.|.+|+++++|++|+|++|+++++.|.+|+++++|++|+|++
T Consensus 14 ~~~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 90 (606)
T 3t6q_A 14 NKTYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTA 90 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCC
Confidence 568999999998 78887764 799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccC
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGA 174 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~ 174 (725)
|+++ .++...|.++++|++|+|++|+++++.+..|+++++|++|+|++|+++++....+..+++|++|++++|.++.+.
T Consensus 91 n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 169 (606)
T 3t6q_A 91 NPLI-FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLS 169 (606)
T ss_dssp CCCS-EECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEEC
T ss_pred Cccc-ccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccC
Confidence 9998 666667899999999999999999988889999999999999999999987677777999999999999998665
Q ss_pred CCCcccccccCCCCCCC--EEECccCcccc--------------------------------------------------
Q 048668 175 ANDLGFVTFLTNCSSLK--VLSLSDNQFGG-------------------------------------------------- 202 (725)
Q Consensus 175 ~~~~~~~~~~~~l~~L~--~L~L~~N~l~~-------------------------------------------------- 202 (725)
+ ..+..+++|+ +|++++|.+++
T Consensus 170 ~------~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i 243 (606)
T 3t6q_A 170 K------EDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243 (606)
T ss_dssp H------HHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCC
T ss_pred h------hhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhcccccccc
Confidence 4 2344455555 55555555443
Q ss_pred -------------------------cCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhh
Q 048668 203 -------------------------ELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVI 257 (725)
Q Consensus 203 -------------------------~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 257 (725)
..+..|..++ .++.|++++|.++ .+|..+..+++|++|++++|.+.+..|..+
T Consensus 244 ~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~ 321 (606)
T 3t6q_A 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFS-GLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISA 321 (606)
T ss_dssp CGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCT-TCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCG
T ss_pred ChhHhchhhcCceeEEEeecCccCccCHHHhcccc-CCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhh
Confidence 3344455555 8999999999999 788899999999999999999999889999
Q ss_pred cCCCCccEEeccCcccccCCCC-CCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCC
Q 048668 258 GELKNLQLLGLYKNFLQGSIPS-GLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGS 336 (725)
Q Consensus 258 ~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~ 336 (725)
..+++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. ..|..+..+..+ ++|++++|.+++.
T Consensus 322 ~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------~~~~~~~~l~~L-~~L~l~~n~l~~~ 391 (606)
T 3t6q_A 322 SNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSD---------CCNLQLRNLSHL-QSLNLSYNEPLSL 391 (606)
T ss_dssp GGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEE---------ESTTTTTTCTTC-CEEECCSCSCEEE
T ss_pred hccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccccc---------CcchhcccCCCC-CEEECCCCcCCcC
Confidence 9999999999999999866655 4899999999999999887321 112333333443 5666666666655
Q ss_pred cchhhhcCCCCCeEEccCccccccCcc-ccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCccccc---Cccc
Q 048668 337 LPQQVGNLKNLIILDISSNQFSGMIPV-TLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQ---FPKF 412 (725)
Q Consensus 337 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~ 412 (725)
.|..|..+++|+.|++++|.+++..+. .+..+++|++|++++|.+++..|..|+.+++|+.|++++|++++. .+..
T Consensus 392 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 471 (606)
T 3t6q_A 392 KTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNS 471 (606)
T ss_dssp CTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCG
T ss_pred CHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchh
Confidence 555666666666666666666554443 255666666666666666655555666666666666666666541 2244
Q ss_pred ccCCCCCCeEEcccccCeeecCCC-CccCCCCCcCccCCc
Q 048668 413 LENLSFLEFLNLSYNHLEGEVPTK-GVFSNKSKIPLQGNV 451 (725)
Q Consensus 413 ~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~ 451 (725)
+..+++|++|++++|.+++.+|.. ..++.++.+++++|.
T Consensus 472 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 511 (606)
T 3t6q_A 472 LQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNR 511 (606)
T ss_dssp GGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred hccCCCccEEECCCCccCccChhhhccccCCCEEECCCCc
Confidence 556666666666666666555432 334555555666553
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.6e-50 Score=464.65 Aligned_cols=449 Identities=21% Similarity=0.217 Sum_probs=259.7
Q ss_pred CccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccC
Q 048668 6 PKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNIS 85 (725)
Q Consensus 6 p~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 85 (725)
|..+.++++|++|+|++|.+++..+.+|+++++|++|+|++|+++++.|..|+++++|++|+|++|.+++..|..|.+++
T Consensus 66 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 145 (680)
T 1ziw_A 66 PELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLE 145 (680)
T ss_dssp TTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCT
T ss_pred HHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccc
Confidence 34444444444444444444432223444444444555544444444444444455555555555554444444444455
Q ss_pred CCceeeccCCCCCCCCChhhhc--CCCCccEEEccCceeeeeCCC-----------------------------------
Q 048668 86 SLEYFYLTSNRFSGSLPFDIVV--NLPNLKELGIGANNFFGLIPD----------------------------------- 128 (725)
Q Consensus 86 ~L~~L~L~~N~l~~~~~~~~~~--~l~~L~~L~L~~N~i~~~~~~----------------------------------- 128 (725)
+|++|++++|+++ .++...+. .+++|++|++++|.++++.|.
T Consensus 146 ~L~~L~L~~n~l~-~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L 224 (680)
T 1ziw_A 146 NLQELLLSNNKIQ-ALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSI 224 (680)
T ss_dssp TCCEEECCSSCCC-CBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCC
T ss_pred cCCEEEccCCccc-ccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccc
Confidence 5555555555444 22222211 233444444444444333332
Q ss_pred ----------------cccccCc--cceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcc-----------
Q 048668 129 ----------------SLSNASN--LELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLG----------- 179 (725)
Q Consensus 129 ----------------~~~~l~~--L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~----------- 179 (725)
.|.+++. |++|+|++|+++++.+..|..+++|++|++++|.+....+..+.
T Consensus 225 ~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (680)
T 1ziw_A 225 RNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLK 304 (680)
T ss_dssp CEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECT
T ss_pred cEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEecc
Confidence 2333322 55555555555555555555555555555555555443321110
Q ss_pred ------------ccc----ccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCcccee--ccCcccccc--cCC
Q 048668 180 ------------FVT----FLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISG--TIPLGIRNL--VNL 239 (725)
Q Consensus 180 ------------~~~----~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~--~~~~~~~~l--~~L 239 (725)
++. .+.++++|++|++++|++++..|..|.+++ .|+.|++++|.+.. .....|..+ ++|
T Consensus 305 ~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L 383 (680)
T 1ziw_A 305 RSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPL 383 (680)
T ss_dssp TCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCC
T ss_pred chhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcC
Confidence 000 234455555555555555554444444443 33333333332110 000111111 123
Q ss_pred ceEEecccccCCCCChhhcCCCCccEEeccCcccccCCC-CCCcCCCCCCEEeCCCCcCCCccc-------------ccc
Q 048668 240 IALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIP-SGLGNLTKLAKLDLGSNSLQGNFI-------------ASQ 305 (725)
Q Consensus 240 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~-------------~~~ 305 (725)
+.|++++|++.++.|.+|..+++|++|++++|.+.+.+| ..|.++++|++|++++|++++... ...
T Consensus 384 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~ 463 (680)
T 1ziw_A 384 HILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRR 463 (680)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTT
T ss_pred ceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcc
Confidence 333334444444555555555555555555555554333 345555555555555555432110 011
Q ss_pred ccc--cccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccccccCc--------cccccccCCcEEE
Q 048668 306 NKL--IGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIP--------VTLSTCVSLEYVD 375 (725)
Q Consensus 306 ~~~--~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~ 375 (725)
+.+ .+.+|..+..+..+ ++|++++|.+++..+..|.++++|++|+|++|++++..+ ..|..+++|++|+
T Consensus 464 n~l~~~~~~p~~~~~l~~L-~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~ 542 (680)
T 1ziw_A 464 VALKNVDSSPSPFQPLRNL-TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542 (680)
T ss_dssp SCCBCTTCSSCTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEE
T ss_pred ccccccccCCcccccCCCC-CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEE
Confidence 111 24567777777776 899999999998888889999999999999999986532 3478899999999
Q ss_pred ccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC-C-ccCCCCCcCccCCccc
Q 048668 376 ISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK-G-VFSNKSKIPLQGNVRL 453 (725)
Q Consensus 376 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~-~~~~~~~~~~~~n~~~ 453 (725)
|++|+++.+.+..|.++++|+.|||++|+++++.+..|..+++|+.|+|++|++++.+|.. . .++.++.+++++|+|.
T Consensus 543 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~ 622 (680)
T 1ziw_A 543 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFD 622 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCC
T ss_pred CCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcc
Confidence 9999999766678999999999999999999888888999999999999999999887753 2 4788999999999999
Q ss_pred cCCC
Q 048668 454 CGGI 457 (725)
Q Consensus 454 c~~~ 457 (725)
|...
T Consensus 623 c~c~ 626 (680)
T 1ziw_A 623 CTCE 626 (680)
T ss_dssp BCCC
T ss_pred cCCc
Confidence 9753
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-50 Score=475.26 Aligned_cols=444 Identities=22% Similarity=0.219 Sum_probs=327.9
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCc-cCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGG-KFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
+||+ +. +++++|+|++|.|++..|..|.++++|++|+|++|...+ +.|.+|+++++|++|+|++|.|+++.|.+|.
T Consensus 18 ~vP~-lp--~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 18 QVPQ-VL--NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CCCS-SC--TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCC-CC--CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 5676 43 478888888888887777888888888888888885443 4477888888888888888888877788888
Q ss_pred ccCCCceeeccCCCCCCCCCh-hhhcCCCCccEEEccCceeeeeCC-CcccccCccceecCCCccccccCccCcccc--c
Q 048668 83 NISSLEYFYLTSNRFSGSLPF-DIVVNLPNLKELGIGANNFFGLIP-DSLSNASNLELLDLSNNQFKGKVSIDFSSL--K 158 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l--~ 158 (725)
++++|++|+|++|.+++.+|. ..|.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.++++.+..|..+ +
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~ 174 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGK 174 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHC
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCC
Confidence 888888888888888754543 356778888888888888877654 467888888888888888877777766665 4
Q ss_pred ccCeeecCCccCCccCCCCcc----------------------------c------------------------------
Q 048668 159 ILWRLNLEQNNLGIGAANDLG----------------------------F------------------------------ 180 (725)
Q Consensus 159 ~L~~L~L~~N~l~~~~~~~~~----------------------------~------------------------------ 180 (725)
+|+.|+++.|.+....+..+. +
T Consensus 175 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~ 254 (844)
T 3j0a_A 175 TLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKD 254 (844)
T ss_dssp SSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTT
T ss_pred ccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCC
Confidence 555555555544332111000 0
Q ss_pred --ccccCC--CCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChh
Q 048668 181 --VTFLTN--CSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDV 256 (725)
Q Consensus 181 --~~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 256 (725)
...+.+ .++|++|++++|.+.+..|..+..++ .|+.|++++|.+.+..|..|.++++|++|+|++|.+.++.+.+
T Consensus 255 ~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 333 (844)
T 3j0a_A 255 PDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK-DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSN 333 (844)
T ss_dssp GGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCC-CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCS
T ss_pred CChhhhhccccCCccEEECCCCcccccChhhhhcCC-CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHH
Confidence 001111 25788888888888877777777777 8888888888888888888888888888888888888888888
Q ss_pred hcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccc--------cccccccccccccc------------
Q 048668 257 IGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFI--------ASQNKLIGALPQQL------------ 316 (725)
Q Consensus 257 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~~~~~~p~~~------------ 316 (725)
|.++++|++|++++|.+.+..+..|..+++|++|++++|.+++... ...|.+. .+|...
T Consensus 334 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~-~l~~~~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 334 FYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLV-TLPKINLTANLIHLSENR 412 (844)
T ss_dssp CSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCC-CCCCCCTTCCEEECCSCC
T ss_pred hcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcc-cccccccccceeecccCc
Confidence 8888888889988888887777788888888888888888775211 1122222 333221
Q ss_pred ----------cccccccceecccCCccCCCcch-hhhcCCCCCeEEccCcccc-----ccCccccccccCCcEEEccCCc
Q 048668 317 ----------LSITTLSLYLDLSNNLLNGSLPQ-QVGNLKNLIILDISSNQFS-----GMIPVTLSTCVSLEYVDISSNC 380 (725)
Q Consensus 317 ----------~~~~~ll~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~ 380 (725)
..+..+ ++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|.
T Consensus 413 l~~l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 491 (844)
T 3j0a_A 413 LENLDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNY 491 (844)
T ss_dssp CCSSTTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHH
T ss_pred cccCchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCc
Confidence 122333 5666666666543332 2444566777777777765 3344567888999999999999
Q ss_pred cccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCC
Q 048668 381 FHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGI 457 (725)
Q Consensus 381 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 457 (725)
+++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|++++.+|.. +..++.+++++|++.|...
T Consensus 492 l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 492 LNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp HTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred ccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 9988888899999999999999999988777776 78999999999999988865 6788999999999999643
No 8
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-49 Score=446.24 Aligned_cols=427 Identities=23% Similarity=0.245 Sum_probs=331.6
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||..+.. ++++|+|++|++++..+.+|..+++|++|+|++|+++++.|.+|.++++|++|+|++|+++++.|.+|.+
T Consensus 21 ~ip~~l~~--~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 21 KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp SCCSSSCS--SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCccc--cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 68887765 8999999999999888889999999999999999999998999999999999999999999888999999
Q ss_pred cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeee-CCCcccccCccceecCCCccccccCccCccccccc--
Q 048668 84 ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKIL-- 160 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L-- 160 (725)
+++|++|++++|+++ .++...+.++++|++|+|++|.++++ .|..|+++++|++|++++|+++++.+..|..+++|
T Consensus 99 l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 177 (570)
T 2z63_A 99 LSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (570)
T ss_dssp CTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTT
T ss_pred ccccccccccccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccch
Confidence 999999999999998 77776688999999999999999875 58899999999999999999999999999999998
Q ss_pred --CeeecCCccCCccCCCCcccccccCCCCCCCEEECccC----------------------------------------
Q 048668 161 --WRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDN---------------------------------------- 198 (725)
Q Consensus 161 --~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N---------------------------------------- 198 (725)
..|++++|.++.+.+.. +... +|++|++++|
T Consensus 178 ~~~~L~l~~n~l~~~~~~~------~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 250 (570)
T 2z63_A 178 LNLSLDLSLNPMNFIQPGA------FKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 250 (570)
T ss_dssp CCCEEECTTCCCCEECTTT------TTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTT
T ss_pred hhhhcccCCCCceecCHHH------hccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhh
Confidence 89999999988766532 2222 4444444444
Q ss_pred ------------------cccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhh---
Q 048668 199 ------------------QFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVI--- 257 (725)
Q Consensus 199 ------------------~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~--- 257 (725)
.+.+..|..+..++ .++.|++++|.+. .+|..+..+ +|++|++++|.+..++...+
T Consensus 251 ~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L 327 (570)
T 2z63_A 251 LEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSL 327 (570)
T ss_dssp TGGGGGSEEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSC
T ss_pred hccccccchhhhhhhcchhhhhhchhhhcCcC-cccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCccccccc
Confidence 22233344444444 5555555555555 345555554 55555555555552222100
Q ss_pred ----------------cCCCCccEEeccCcccccCC--CCCCcCCCCCCEEeCCCCcCCCcccccccccccccccccccc
Q 048668 258 ----------------GELKNLQLLGLYKNFLQGSI--PSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSI 319 (725)
Q Consensus 258 ----------------~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~ 319 (725)
..+++|++|++++|.+.+.. +..+..+++|++|++++|.++ .+|..+..+
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~------------~~~~~~~~l 395 (570)
T 2z63_A 328 KRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI------------TMSSNFLGL 395 (570)
T ss_dssp CEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE------------EEEEEEETC
T ss_pred CEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccc------------ccccccccc
Confidence 33444555555555444322 333444455555555555433 455555555
Q ss_pred ccccceecccCCccCCCcc-hhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccc-cccCccccCCCCCCE
Q 048668 320 TTLSLYLDLSNNLLNGSLP-QQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFH-GIIPPSLGFLKSIKF 397 (725)
Q Consensus 320 ~~ll~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~ 397 (725)
..+ ++|++++|.+++..| ..+..+++|++|++++|.+.+..|..|..+++|++|+|++|.++ +.+|..|..+++|+.
T Consensus 396 ~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 396 EQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp TTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 555 889999999987665 57889999999999999999888999999999999999999997 578899999999999
Q ss_pred EeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC-CccCCCCCcCccCCccccCC
Q 048668 398 LDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK-GVFSNKSKIPLQGNVRLCGG 456 (725)
Q Consensus 398 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~ 456 (725)
|+|++|++++..|..|..+++|++|++++|++++.+|.. ..++.++.+++++|++.|..
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 999999999988999999999999999999999887754 45778889999999988753
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-48 Score=451.51 Aligned_cols=436 Identities=19% Similarity=0.178 Sum_probs=317.3
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
.+||+.+. +++++|+|++|++++..+..|..+++|++|+|++|++++..|++|+++++|++|+|++|+++++.+.+|+
T Consensus 17 ~~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~ 94 (680)
T 1ziw_A 17 TQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA 94 (680)
T ss_dssp SSCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhc
Confidence 36888887 4899999999999977777899999999999999999999999999999999999999999977777899
Q ss_pred ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcc--ccccc
Q 048668 83 NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFS--SLKIL 160 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~--~l~~L 160 (725)
++++|++|+|++|+++ .++...|.++++|++|+|++|.+++..+..|.++++|++|+|++|+++++.+..|. .+++|
T Consensus 95 ~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 173 (680)
T 1ziw_A 95 FCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSL 173 (680)
T ss_dssp TCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEE
T ss_pred cCCCCCEEECCCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccc
Confidence 9999999999999998 77777788999999999999999999889999999999999999999988877665 45889
Q ss_pred CeeecCCccCCccCCCCcccccccC---------------------CCCCCCEEECccCcccccCChhhhhcc-ccceeE
Q 048668 161 WRLNLEQNNLGIGAANDLGFVTFLT---------------------NCSSLKVLSLSDNQFGGELPHSIANLS-STMIVF 218 (725)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~~~~~~---------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~-~~l~~L 218 (725)
++|++++|.++...+..+.....+. ..++|++|++++|++++..|..+..+. .+|+.|
T Consensus 174 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L 253 (680)
T 1ziw_A 174 KKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTML 253 (680)
T ss_dssp SEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEE
T ss_pred cEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEE
Confidence 9999999998876653221100000 125677777777777777777777665 247778
Q ss_pred EecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEecc-----------------------------
Q 048668 219 LIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLY----------------------------- 269 (725)
Q Consensus 219 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~----------------------------- 269 (725)
++++|.+.+..|..|..+++|++|++++|++.+..|.+|.++++|++|+++
T Consensus 254 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~ 333 (680)
T 1ziw_A 254 DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEH 333 (680)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCE
T ss_pred ECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCE
Confidence 888887777777777777778888888777777666655555555555554
Q ss_pred ----CcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccc--cccceecccCCccCCCcchhhhc
Q 048668 270 ----KNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSIT--TLSLYLDLSNNLLNGSLPQQVGN 343 (725)
Q Consensus 270 ----~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~--~ll~~L~L~~n~l~~~~~~~~~~ 343 (725)
+|.+.+..+..|..+++|++|++++|.++. ..++...+... ..++.|++++|++++..|..|..
T Consensus 334 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~----------~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 334 LNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL----------RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp EECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC----------CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred EECCCCccCCCChhHhccccCCcEEECCCCchhh----------hhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 444444444445555555555555554321 12222222111 12366777777777666777777
Q ss_pred CCCCCeEEccCccccccCc-cccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCccc--ccCcccccCCCCCC
Q 048668 344 LKNLIILDISSNQFSGMIP-VTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFS--GQFPKFLENLSFLE 420 (725)
Q Consensus 344 l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~ 420 (725)
+++|+.|+|++|.+++.+| ..|..+++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|..+++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 7777777777777765444 56777777777777777777666666777777777777777665 45666677777777
Q ss_pred eEEcccccCeeecCCC-CccCCCCCcCccCCc
Q 048668 421 FLNLSYNHLEGEVPTK-GVFSNKSKIPLQGNV 451 (725)
Q Consensus 421 ~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~ 451 (725)
.|++++|.+++.+|.. ..+..++.+++++|.
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 515 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNN 515 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCC
Confidence 7777777776655542 345566666666664
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.3e-48 Score=438.47 Aligned_cols=415 Identities=21% Similarity=0.182 Sum_probs=349.9
Q ss_pred cccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccc
Q 048668 2 EGQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSI 81 (725)
Q Consensus 2 ~~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 81 (725)
++..|..|.++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|.+|+++++|++|+|++|++++..+..|
T Consensus 45 ~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~ 124 (606)
T 3vq2_A 45 KILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPI 124 (606)
T ss_dssp CEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCC
T ss_pred CEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccccccccc
Confidence 34456689999999999999999998888999999999999999999998889999999999999999999998888899
Q ss_pred cccCCCceeeccCCCCCC-CCChhhhcCCCCccEEEccCceeeeeCCCcccccCccc----eecCCCccccccCccCccc
Q 048668 82 CNISSLEYFYLTSNRFSG-SLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLE----LLDLSNNQFKGKVSIDFSS 156 (725)
Q Consensus 82 ~~l~~L~~L~L~~N~l~~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~----~L~Ls~N~i~~~~~~~f~~ 156 (725)
+++++|++|++++|++++ .+|. .|.++++|++|+|++|+++++.+..|+.+.+|+ +|++++|+++++++..|..
T Consensus 125 ~~l~~L~~L~L~~n~l~~~~lp~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~ 203 (606)
T 3vq2_A 125 GQLITLKKLNVAHNFIHSCKLPA-YFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG 203 (606)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCG-GGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT
T ss_pred CCCCCCCEEeCCCCcccceechH-hHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccC
Confidence 999999999999999984 3554 468999999999999999999888888777665 6888888887666554433
Q ss_pred ccccCeeecCCccC------------------------------------------------------------------
Q 048668 157 LKILWRLNLEQNNL------------------------------------------------------------------ 170 (725)
Q Consensus 157 l~~L~~L~L~~N~l------------------------------------------------------------------ 170 (725)
. +|++|++++|.+
T Consensus 204 ~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~ 282 (606)
T 3vq2_A 204 I-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFH 282 (606)
T ss_dssp C-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCG
T ss_pred c-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccc
Confidence 2 333333333322
Q ss_pred ---------------CccCC--------------CC-cccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEe
Q 048668 171 ---------------GIGAA--------------ND-LGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLI 220 (725)
Q Consensus 171 ---------------~~~~~--------------~~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l 220 (725)
..++. .. ..++ .+ .+++|++|++++|+..+.. .+..++ .|+.|++
T Consensus 283 ~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~-~L~~L~l 357 (606)
T 3vq2_A 283 CLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALP-SLSYLDL 357 (606)
T ss_dssp GGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCT-TCCEEEC
T ss_pred cCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccc-cC-CCCccceeeccCCcCccch--hhccCC-CCCEEEC
Confidence 21110 00 0112 23 8899999999999665444 455666 8999999
Q ss_pred cCccceec--cCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCC-CCCcCCCCCCEEeCCCCcC
Q 048668 221 GGNQISGT--IPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIP-SGLGNLTKLAKLDLGSNSL 297 (725)
Q Consensus 221 ~~n~i~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l 297 (725)
++|.+++. +|..+..+++|++|++++|.+.+. |..|..+++|++|++++|.+.+..| ..+..+++|++|++++|.+
T Consensus 358 s~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l 436 (606)
T 3vq2_A 358 SRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436 (606)
T ss_dssp CSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCC
T ss_pred cCCccCCCcchhhhhccCCcccEeECCCCccccc-hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCC
Confidence 99999977 488899999999999999999864 5889999999999999999998877 6899999999999999966
Q ss_pred CCccccccccccccccccccccccccceecccCCccCC-CcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEc
Q 048668 298 QGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNG-SLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDI 376 (725)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 376 (725)
+ +..|..+..+..+ ++|++++|.+++ .+|..|+.+++|+.|+|++|++++..|..|..+++|++|+|
T Consensus 437 ~-----------~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 437 K-----------IDFDGIFLGLTSL-NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp E-----------ECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred C-----------ccchhhhcCCCCC-CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 5 3455556666666 999999999997 47889999999999999999999999999999999999999
Q ss_pred cCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCC-CCCeEEcccccCeeecCCCC
Q 048668 377 SSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLS-FLEFLNLSYNHLEGEVPTKG 437 (725)
Q Consensus 377 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~ 437 (725)
++|++++..|..|+.+++|+.|||++|+++ .+|..+..++ +|++|++++|+|.|.++..+
T Consensus 505 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp CSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred CCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 999999999999999999999999999999 5677798887 59999999999999888643
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.1e-48 Score=453.63 Aligned_cols=430 Identities=21% Similarity=0.183 Sum_probs=340.6
Q ss_pred cEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCc-ccccCcccccccCCCceeeccC
Q 048668 16 QALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENK-FYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 16 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
+..+.++++++ .+|. -.++|++|||++|+|+++.|..|.++++|++|+|++|. +..+.|.+|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 57888999999 6776 45799999999999999999999999999999999995 4445589999999999999999
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCc--ccccCccceecCCCccccccCc-cCcccccccCeeecCCccCC
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDS--LSNASNLELLDLSNNQFKGKVS-IDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~--~~~l~~L~~L~Ls~N~i~~~~~-~~f~~l~~L~~L~L~~N~l~ 171 (725)
|+|+ .++...|.++++|++|+|++|.+++..+.. |.++++|++|||++|.++++.+ ..|..+++|++|+|++|.++
T Consensus 83 N~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 83 SKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CCCC-EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred CcCc-ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 9998 666677899999999999999999865554 9999999999999999998765 57999999999999999998
Q ss_pred ccCCCCcccc--------------------cccCCCC------CCCEEECccCcccccCChhhhhc--------------
Q 048668 172 IGAANDLGFV--------------------TFLTNCS------SLKVLSLSDNQFGGELPHSIANL-------------- 211 (725)
Q Consensus 172 ~~~~~~~~~~--------------------~~~~~l~------~L~~L~L~~N~l~~~~p~~~~~l-------------- 211 (725)
...+.++... ..+..++ +|++|++++|.+++..|..+...
T Consensus 162 ~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 162 LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 7655433211 1122222 38999999998877666555432
Q ss_pred -----------------------cccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEec
Q 048668 212 -----------------------SSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGL 268 (725)
Q Consensus 212 -----------------------~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 268 (725)
...++.|++++|.+.+..+..|..+++|+.|+|++|++.++.+.+|.++++|++|+|
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 321 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNL 321 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEE
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEEC
Confidence 147899999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccCCCCCCcCCCCCCEEeCCCCcCCCccc-------------cccccccccccc--c-------------ccccc
Q 048668 269 YKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFI-------------ASQNKLIGALPQ--Q-------------LLSIT 320 (725)
Q Consensus 269 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-------------~~~~~~~~~~p~--~-------------~~~~~ 320 (725)
++|.+.+..|..|..+++|++|++++|++++... .++|.+. .++. . +....
T Consensus 322 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~L~~L~l~~N~l~~l~~~~ 400 (844)
T 3j0a_A 322 SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-TIHFIPSIPDIFLSGNKLVTLPKIN 400 (844)
T ss_dssp ESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSC-CCSSCCSCSEEEEESCCCCCCCCCC
T ss_pred CCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCC-cccCCCCcchhccCCCCcccccccc
Confidence 9999998889999999999999999998874211 0111111 1111 0 00000
Q ss_pred cccceecccCCccCCCc-chhhhcCCCCCeEEccCccccccCcc-ccccccCCcEEEccCCccc-----cccCccccCCC
Q 048668 321 TLSLYLDLSNNLLNGSL-PQQVGNLKNLIILDISSNQFSGMIPV-TLSTCVSLEYVDISSNCFH-----GIIPPSLGFLK 393 (725)
Q Consensus 321 ~ll~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~ 393 (725)
..++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..++
T Consensus 401 ~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~ 480 (844)
T 3j0a_A 401 LTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLS 480 (844)
T ss_dssp TTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBC
T ss_pred cccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcc
Confidence 01122333333333221 12345788888899998888865543 4556788999999999887 44456788999
Q ss_pred CCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCcc
Q 048668 394 SIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVR 452 (725)
Q Consensus 394 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 452 (725)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++.+|.... ..++.+++++|..
T Consensus 481 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l 538 (844)
T 3j0a_A 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQL 538 (844)
T ss_dssp CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECC
T ss_pred cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcC
Confidence 999999999999999999999999999999999999988776533 7888899998854
No 12
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.1e-48 Score=443.61 Aligned_cols=418 Identities=19% Similarity=0.285 Sum_probs=318.0
Q ss_pred ccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCC----------------------------------
Q 048668 13 FKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLG---------------------------------- 58 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---------------------------------- 58 (725)
.+++.|+|++|++.|.+|.+|+.+++|++|+|++|.+. ..+..++
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEK-VNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGG-GTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccc-cCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHH
Confidence 36999999999999999999999999999999999762 1111111
Q ss_pred -------------------CCCCCCEEEcc--CCcccccCcccccccCCCceeeccCCCCCCC-----------------
Q 048668 59 -------------------LLRNLVQLNVA--ENKFYGMFPRSICNISSLEYFYLTSNRFSGS----------------- 100 (725)
Q Consensus 59 -------------------~l~~L~~L~Ls--~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----------------- 100 (725)
....++.+.+. .|++++ +|..|+++++|++|+|++|++++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 11122223332 578887 788888888888888888888853
Q ss_pred CChhhh-cCCCCccEEEccCceeeeeCCCcccccCccceecCCCcc-ccc-cCccCcccc------cccCeeecCCccCC
Q 048668 101 LPFDIV-VNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQ-FKG-KVSIDFSSL------KILWRLNLEQNNLG 171 (725)
Q Consensus 101 ~~~~~~-~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~-i~~-~~~~~f~~l------~~L~~L~L~~N~l~ 171 (725)
+|..+. .++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ ..|..+..+ ++|++|++++|.++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 776541 278888888888888888888888888888888888887 876 556666665 88888888888887
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccC-CceEEecccccC
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVN-LIALAVEVNQLH 250 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~-L~~L~L~~N~l~ 250 (725)
.++.. ..+.++++|++|++++|+++|.+| .+..++ +|+.|++++|.+. .+|..+..+++ |++|++++|+++
T Consensus 319 ~ip~~-----~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 319 TFPVE-----TSLQKMKKLGMLECLYNQLEGKLP-AFGSEI-KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp SCCCH-----HHHTTCTTCCEEECCSCCCEEECC-CCEEEE-EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS
T ss_pred ccCch-----hhhccCCCCCEEeCcCCcCccchh-hhCCCC-CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc
Confidence 43310 157788888888888888888888 777777 7888888888888 77888888888 888888888888
Q ss_pred CCCChhhcCCC--CccEEeccCcccccCCCCCCc-------CCCCCCEEeCCCCcCCCcccccccccccccccccccccc
Q 048668 251 GTIPDVIGELK--NLQLLGLYKNFLQGSIPSGLG-------NLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITT 321 (725)
Q Consensus 251 ~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ 321 (725)
.+|..+..++ +|++|++++|.+.+..|..|. .+++|++|++++|+++ .+|..++....
T Consensus 391 -~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~------------~lp~~~~~~l~ 457 (636)
T 4eco_A 391 -YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS------------KFPKELFSTGS 457 (636)
T ss_dssp -SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC------------SCCTHHHHTTC
T ss_pred -ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC------------cCCHHHHccCC
Confidence 5566666654 788888888888888888777 7778888888888776 67777666434
Q ss_pred ccceecccCCccCCCcchhhhcCC-------CCCeEEccCccccccCccccc--cccCCcEEEccCCccccccCccccCC
Q 048668 322 LSLYLDLSNNLLNGSLPQQVGNLK-------NLIILDISSNQFSGMIPVTLS--TCVSLEYVDISSNCFHGIIPPSLGFL 392 (725)
Q Consensus 322 ll~~L~L~~n~l~~~~~~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l 392 (725)
.+++|+|++|.++...+..+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+
T Consensus 458 ~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l 535 (636)
T 4eco_A 458 PLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS 535 (636)
T ss_dssp CCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred CCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcC
Confidence 447888888888843333344333 8888888888888 5666665 78888888888888886 77888888
Q ss_pred CCCCEEeC------CCCcccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCC
Q 048668 393 KSIKFLDV------SCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGI 457 (725)
Q Consensus 393 ~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 457 (725)
++|+.|+| ++|++.+.+|..+..+++|++|+|++|++ +.+|.. ..+.++.+++++|++.|-..
T Consensus 536 ~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 536 STLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp SSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEEC
T ss_pred CCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCccccH
Confidence 88888888 55777888888888888888888888888 455543 24778888888888777543
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.4e-47 Score=431.63 Aligned_cols=421 Identities=22% Similarity=0.272 Sum_probs=319.5
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
.+||+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|++|.++++|++|+|++|++++..|..|+
T Consensus 18 ~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 95 (549)
T 2z81_A 18 TSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFG 95 (549)
T ss_dssp SSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHT
T ss_pred ccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhc
Confidence 36888776 5899999999999988889999999999999999999999999999999999999999999988888899
Q ss_pred ccCCCceeeccCCCCCCCCC-hhhhcCCCCccEEEccCce-eeeeCCCcccccCccceecCCCccccccCccCccccccc
Q 048668 83 NISSLEYFYLTSNRFSGSLP-FDIVVNLPNLKELGIGANN-FFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKIL 160 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~-~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L 160 (725)
++++|++|+|++|+++ .++ ...+.++++|++|++++|. +..+.+..|.++++|++|++++|++++..+..|..+++|
T Consensus 96 ~l~~L~~L~Ls~n~l~-~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 174 (549)
T 2z81_A 96 PLSSLKYLNLMGNPYQ-TLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDI 174 (549)
T ss_dssp TCTTCCEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred cCCCCcEEECCCCccc-ccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccC
Confidence 9999999999999998 432 2457899999999999998 566666789999999999999999999888888888888
Q ss_pred CeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccC--Chhhhhccc-------------------------
Q 048668 161 WRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGEL--PHSIANLSS------------------------- 213 (725)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~------------------------- 213 (725)
++|+++.|.+..++. ..+..+++|++|++++|++++.. |..+.....
T Consensus 175 ~~L~l~~n~~~~~~~------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~ 248 (549)
T 2z81_A 175 HHLTLHLSESAFLLE------IFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLR 248 (549)
T ss_dssp EEEEEECSBSTTHHH------HHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGG
T ss_pred ceEecccCcccccch------hhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhh
Confidence 888888777654332 22345677777777777776431 212222222
Q ss_pred ---cceeEEecCccceeccC---------c--------------------------ccccccCCceEEecccccCCCCCh
Q 048668 214 ---TMIVFLIGGNQISGTIP---------L--------------------------GIRNLVNLIALAVEVNQLHGTIPD 255 (725)
Q Consensus 214 ---~l~~L~l~~n~i~~~~~---------~--------------------------~~~~l~~L~~L~L~~N~l~~~~~~ 255 (725)
.++.+.+.+|.+.+... . .+....+|+.|++++|.+..++..
T Consensus 249 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~ 328 (549)
T 2z81_A 249 YILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCS 328 (549)
T ss_dssp GCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHH
T ss_pred hhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHH
Confidence 34444444444433110 0 011234677777777777644333
Q ss_pred hhcCCCCccEEeccCcccccCCC---CCCcCCCCCCEEeCCCCcCCCcccccccccccccc---ccccccccccceeccc
Q 048668 256 VIGELKNLQLLGLYKNFLQGSIP---SGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALP---QQLLSITTLSLYLDLS 329 (725)
Q Consensus 256 ~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p---~~~~~~~~ll~~L~L~ 329 (725)
.+..+++|++|++++|.+.+..| ..+..+++|++|++++|+++ .++ ..+..+..+ ++|+++
T Consensus 329 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~------------~~~~~~~~~~~l~~L-~~L~Ls 395 (549)
T 2z81_A 329 FSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR------------SMQKTGEILLTLKNL-TSLDIS 395 (549)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCC------------CHHHHHHHGGGCTTC-CEEECT
T ss_pred HHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCccc------------ccccchhhhhcCCCC-CEEECC
Confidence 44678888888888888876553 34677888888888888776 232 123344444 788888
Q ss_pred CCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccC
Q 048668 330 NNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQF 409 (725)
Q Consensus 330 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 409 (725)
+|+++ .+|..+..+++|++|++++|++++ +|..+. ++|++|+|++|++++.+ ..+++|+.|+|++|+++ .+
T Consensus 396 ~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~i 466 (549)
T 2z81_A 396 RNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TL 466 (549)
T ss_dssp TCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SC
T ss_pred CCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cC
Confidence 88888 567778888888999999888873 343332 57889999999888643 57889999999999998 55
Q ss_pred cccccCCCCCCeEEcccccCeeecCCC-CccCCCCCcCccCCccccC
Q 048668 410 PKFLENLSFLEFLNLSYNHLEGEVPTK-GVFSNKSKIPLQGNVRLCG 455 (725)
Q Consensus 410 p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 455 (725)
|. ...+++|++|||++|++++.+|.. ..+..++.+++++|++.|.
T Consensus 467 p~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 467 PD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 65 467899999999999999888763 5678888999999998774
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-47 Score=433.08 Aligned_cols=417 Identities=19% Similarity=0.207 Sum_probs=341.0
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
+-.|..|.++++|++|+|++|++++..+.+|+++++|++|+|++|++++..|.+|+++++|++|+|++|+++++.+..|+
T Consensus 42 ~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~ 121 (570)
T 2z63_A 42 HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 121 (570)
T ss_dssp EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCT
T ss_pred ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcccc
Confidence 33456789999999999999999987888999999999999999999988899999999999999999999987777899
Q ss_pred ccCCCceeeccCCCCCC-CCChhhhcCCCCccEEEccCceeeeeCCCcccccCcc----ceecCCCccccccCccCcccc
Q 048668 83 NISSLEYFYLTSNRFSG-SLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNL----ELLDLSNNQFKGKVSIDFSSL 157 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L----~~L~Ls~N~i~~~~~~~f~~l 157 (725)
++++|++|++++|.+++ .+|. .|.++++|++|++++|+++++.+..|+.+++| ++|++++|.++++.+..|...
T Consensus 122 ~l~~L~~L~L~~n~l~~~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~ 200 (570)
T 2z63_A 122 HLKTLKELNVAHNLIQSFKLPE-YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI 200 (570)
T ss_dssp TCTTCCEEECCSSCCCCCCCCG-GGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC
T ss_pred ccccccEEecCCCccceecChh-hhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC
Confidence 99999999999999984 2454 46889999999999999999988999999998 899999999998888777655
Q ss_pred cccCeeecCCccCCc-------------------------------cCCC---------------------CcccccccC
Q 048668 158 KILWRLNLEQNNLGI-------------------------------GAAN---------------------DLGFVTFLT 185 (725)
Q Consensus 158 ~~L~~L~L~~N~l~~-------------------------------~~~~---------------------~~~~~~~~~ 185 (725)
+|++|++++|.... +... ....+..+.
T Consensus 201 -~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~ 279 (570)
T 2z63_A 201 -RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFN 279 (570)
T ss_dssp -EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTG
T ss_pred -cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhc
Confidence 56677666652110 0000 000112344
Q ss_pred CCCCCCEEECccCcccccCChhhhhc-------------------cccceeEEecCccceeccCcccccccCCceEEecc
Q 048668 186 NCSSLKVLSLSDNQFGGELPHSIANL-------------------SSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEV 246 (725)
Q Consensus 186 ~l~~L~~L~L~~N~l~~~~p~~~~~l-------------------~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~ 246 (725)
.+++|++|++++|.++ .+|..+..+ ...++.|++.+|.+.+..+. ..+++|++|++++
T Consensus 280 ~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~ 356 (570)
T 2z63_A 280 CLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSR 356 (570)
T ss_dssp GGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCS
T ss_pred CcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCCCCCEEeCcC
Confidence 4566666666666665 345444433 11445555555555444333 5788999999999
Q ss_pred cccCCCC--ChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCcccccccccccccccc-cccccccc
Q 048668 247 NQLHGTI--PDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQ-LLSITTLS 323 (725)
Q Consensus 247 N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~-~~~~~~ll 323 (725)
|++.+.. +..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+++ ..|.. +.....+
T Consensus 357 n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~-----------~~~~~~~~~l~~L- 423 (570)
T 2z63_A 357 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQ-----------MSEFSVFLSLRNL- 423 (570)
T ss_dssp SCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEES-----------CTTSCTTTTCTTC-
T ss_pred CccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCcccc-----------ccchhhhhcCCCC-
Confidence 9998664 78899999999999999999965555 8999999999999997662 33323 3344444
Q ss_pred ceecccCCccCCCcchhhhcCCCCCeEEccCcccc-ccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCC
Q 048668 324 LYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFS-GMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSC 402 (725)
Q Consensus 324 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 402 (725)
++|++++|.+++..|..|..+++|+.|++++|.++ +.+|..+..+++|++|+|++|++++..|..|+.+++|+.|++++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 89999999999889999999999999999999998 57899999999999999999999999899999999999999999
Q ss_pred CcccccCcccccCCCCCCeEEcccccCeeecCCCC
Q 048668 403 NNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKG 437 (725)
Q Consensus 403 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 437 (725)
|++++..|..|..+++|+.|++++|+++|.+|...
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 99999999999999999999999999999998753
No 15
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-47 Score=443.90 Aligned_cols=393 Identities=20% Similarity=0.228 Sum_probs=243.6
Q ss_pred ccCcEEecCCCccCccCCccccCCCCCcEEEc-cCCcCCcc---------------------------------------
Q 048668 13 FKLQALALAGNYLTGKLPDFIGNLSALQVIHI-KGNSLGGK--------------------------------------- 52 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l-~~n~l~~~--------------------------------------- 52 (725)
.+++.|+|++|++.|.+|++|+++++|++|+| ++|.+.|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46888999999999899999999999999999 77765443
Q ss_pred -------------------------------------CCCCCCCCCCCCEEEccCCcccc-----------------cCc
Q 048668 53 -------------------------------------FPTTLGLLRNLVQLNVAENKFYG-----------------MFP 78 (725)
Q Consensus 53 -------------------------------------~~~~~~~l~~L~~L~Ls~N~l~~-----------------~~~ 78 (725)
+|..|+++++|++|+|++|+|++ .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 45556666666666666666665 255
Q ss_pred cccc--ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCce-eee-eCCCcccccC-------ccceecCCCcccc
Q 048668 79 RSIC--NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANN-FFG-LIPDSLSNAS-------NLELLDLSNNQFK 147 (725)
Q Consensus 79 ~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~-i~~-~~~~~~~~l~-------~L~~L~Ls~N~i~ 147 (725)
..++ ++++|++|+|++|++.+.+|. .+.++++|+.|+|++|+ +++ .+|..+..++ +|++|+|++|+|+
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~-~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPD-FLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCG-GGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred hhhhhccCCCCCEEECcCCCCCccChH-HHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 5544 666666666666666656663 34566666666666665 655 4454444443 6666666666666
Q ss_pred ccCc-cCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccce
Q 048668 148 GKVS-IDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQIS 226 (725)
Q Consensus 148 ~~~~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~ 226 (725)
.++. ..|..+++|++|+|++|.++.++ .+.++++|++|+|++|+++ .+|..+..++..|+.|++++|.+.
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~~lp--------~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~ 632 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVRHLE--------AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK 632 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCCBCC--------CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC
T ss_pred ccCChhhhhcCCCCCEEECCCCCcccch--------hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC
Confidence 4332 25666666666666666665322 2456666666666666666 566666666623666666666666
Q ss_pred eccCcccccccC--CceEEecccccCCCCChhh---c--CCCCccEEeccCcccccCCCCC-CcCCCCCCEEeCCCCcCC
Q 048668 227 GTIPLGIRNLVN--LIALAVEVNQLHGTIPDVI---G--ELKNLQLLGLYKNFLQGSIPSG-LGNLTKLAKLDLGSNSLQ 298 (725)
Q Consensus 227 ~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~ 298 (725)
.+|..+..+.. |+.|+|++|++.+.+|... . .+++|++|+|++|.+.. +|.. +..+++|+.|+|++|+|+
T Consensus 633 -~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 633 -YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp -SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS
T ss_pred -cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-cCHHHHccCCCCCEEECCCCcCC
Confidence 55655555443 6666666666665544322 1 22356666666666663 3333 335666666666666555
Q ss_pred Ccccccccccccccccccccccc-------ccceecccCCccCCCcchhhh--cCCCCCeEEccCccccccCcccccccc
Q 048668 299 GNFIASQNKLIGALPQQLLSITT-------LSLYLDLSNNLLNGSLPQQVG--NLKNLIILDISSNQFSGMIPVTLSTCV 369 (725)
Q Consensus 299 ~~~~~~~~~~~~~~p~~~~~~~~-------ll~~L~L~~n~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 369 (725)
.+|..++.... .++.|+|++|+++ .+|..+. .+++|+.|+|++|.+++ +|..+..++
T Consensus 711 ------------~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~ 776 (876)
T 4ecn_A 711 ------------SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSS 776 (876)
T ss_dssp ------------CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCT
T ss_pred ------------ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCC
Confidence 45554444331 2366666666666 4555554 66666666666666665 566666666
Q ss_pred CCcEEEccC------CccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecC
Q 048668 370 SLEYVDISS------NCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVP 434 (725)
Q Consensus 370 ~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 434 (725)
+|+.|+|++ |.+.+.+|..|..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+
T Consensus 777 ~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 777 QLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp TCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEEC
T ss_pred CCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccCh
Confidence 666666654 556666666666666666666666666 45555544 466666666666655443
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.4e-47 Score=430.83 Aligned_cols=406 Identities=19% Similarity=0.214 Sum_probs=305.4
Q ss_pred CcccCCccccCcccCcEEecCCCccC------c---------------------------cCCcccc-------------
Q 048668 1 LEGQIPKEIGSLFKLQALALAGNYLT------G---------------------------KLPDFIG------------- 34 (725)
Q Consensus 1 ~~~~ip~~~~~l~~l~~L~l~~n~l~------~---------------------------~~~~~~~------------- 34 (725)
++|.||++++++++|++|+|++|.+. + .+|..+.
T Consensus 93 l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~ 172 (636)
T 4eco_A 93 ASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQ 172 (636)
T ss_dssp CEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTS
T ss_pred cCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccc
Confidence 57999999999999999999999662 1 0111111
Q ss_pred ------CCCCCcEEEcc--CCcCCccCCCCCCCCCCCCEEEccCCccccc-----------------Cccccc--ccCCC
Q 048668 35 ------NLSALQVIHIK--GNSLGGKFPTTLGLLRNLVQLNVAENKFYGM-----------------FPRSIC--NISSL 87 (725)
Q Consensus 35 ------~l~~L~~L~l~--~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~~~~~~--~l~~L 87 (725)
....++.+.+. +|++++ +|..|+++++|++|+|++|.+++. +|..+. ++++|
T Consensus 173 ~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L 251 (636)
T 4eco_A 173 KSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDL 251 (636)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCC
Confidence 01112222222 467776 677777777777777777777764 677766 77777
Q ss_pred ceeeccCCCCCCCCChhhhcCCCCccEEEccCce-eee-eCCCccccc------CccceecCCCccccccCc-cCccccc
Q 048668 88 EYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANN-FFG-LIPDSLSNA------SNLELLDLSNNQFKGKVS-IDFSSLK 158 (725)
Q Consensus 88 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~-i~~-~~~~~~~~l------~~L~~L~Ls~N~i~~~~~-~~f~~l~ 158 (725)
++|+|++|++.+.+|.. +.++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++.++. ..|..++
T Consensus 252 ~~L~L~~n~l~~~~p~~-l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~ 330 (636)
T 4eco_A 252 TDVEVYNCPNLTKLPTF-LKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMK 330 (636)
T ss_dssp CEEEEECCTTCSSCCTT-TTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCT
T ss_pred CEEEecCCcCCccChHH-HhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCC
Confidence 77777777777667743 4677777777777777 766 566666655 777777777777774433 2677777
Q ss_pred ccCeeecCCccCC-ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCccccccc
Q 048668 159 ILWRLNLEQNNLG-IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLV 237 (725)
Q Consensus 159 ~L~~L~L~~N~l~-~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~ 237 (725)
+|++|++++|.++ .++ .+.++++|++|++++|+++ .+|..+..++..|+.|++++|.++ .+|..+..+.
T Consensus 331 ~L~~L~L~~N~l~g~ip--------~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~ 400 (636)
T 4eco_A 331 KLGMLECLYNQLEGKLP--------AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKS 400 (636)
T ss_dssp TCCEEECCSCCCEEECC--------CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTC
T ss_pred CCCEEeCcCCcCccchh--------hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcc
Confidence 7777777777776 332 2456677777777777777 677777777733777888888777 6777766654
Q ss_pred --CCceEEecccccCCCCChhhc-------CCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccc
Q 048668 238 --NLIALAVEVNQLHGTIPDVIG-------ELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKL 308 (725)
Q Consensus 238 --~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 308 (725)
+|+.|++++|.+.+..|..|. .+++|++|+|++|.+.+..+..+..+++|++|+|++|+++
T Consensus 401 l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~---------- 470 (636)
T 4eco_A 401 VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT---------- 470 (636)
T ss_dssp SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS----------
T ss_pred cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC----------
Confidence 888899999998888888887 7778999999999888544444566888999999998776
Q ss_pred ccccccccccccc-------ccceecccCCccCCCcchhhh--cCCCCCeEEccCccccccCccccccccCCcEEEc---
Q 048668 309 IGALPQQLLSITT-------LSLYLDLSNNLLNGSLPQQVG--NLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDI--- 376 (725)
Q Consensus 309 ~~~~p~~~~~~~~-------ll~~L~L~~n~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L--- 376 (725)
.+|...+.... .+++|+|++|.++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 471 --~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 471 --EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp --BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred --CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 66666665442 3488999999998 6777776 89999999999999997 8888999999999999
Q ss_pred ---cCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCC
Q 048668 377 ---SSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPT 435 (725)
Q Consensus 377 ---s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 435 (725)
++|++.+.+|..++.+++|+.|+|++|++ +.+|..+. ++|+.|||++|++.+..+.
T Consensus 547 ~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~~~~ 605 (636)
T 4eco_A 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISIDLS 605 (636)
T ss_dssp BCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEEECT
T ss_pred cccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccccHH
Confidence 56888899999999999999999999999 57787766 7999999999999876654
No 17
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=9.1e-46 Score=424.72 Aligned_cols=436 Identities=21% Similarity=0.209 Sum_probs=340.2
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
.+||+.++. ++++|+|++|+|++..+.+|.++++|++|||++|+|+++.|++|.++++|++|+|++|+|+++.+.+|.
T Consensus 44 ~~vP~~lp~--~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~ 121 (635)
T 4g8a_A 44 YKIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 121 (635)
T ss_dssp SSCCSSSCT--TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred CccCCCCCc--CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence 378988876 899999999999977778999999999999999999999999999999999999999999988889999
Q ss_pred ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeee-CCCcccccCccceecCCCccccccCccCcccccccC
Q 048668 83 NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILW 161 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~ 161 (725)
++++|++|+|++|+|+ .+|...|.++++|++|+|++|.++.+ .|..++.+++|++|+|++|+|+++.+..|..+.+++
T Consensus 122 ~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~ 200 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 200 (635)
T ss_dssp TCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhh
Confidence 9999999999999998 88888889999999999999999875 467889999999999999999999998888876654
Q ss_pred ----eeecCCccCCccCCCCcccc--------------------------------------------------------
Q 048668 162 ----RLNLEQNNLGIGAANDLGFV-------------------------------------------------------- 181 (725)
Q Consensus 162 ----~L~L~~N~l~~~~~~~~~~~-------------------------------------------------------- 181 (725)
.++++.|.++.+.+......
T Consensus 201 ~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 280 (635)
T 4g8a_A 201 LLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 280 (635)
T ss_dssp TCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGG
T ss_pred hhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccc
Confidence 57778877765443211000
Q ss_pred -------------------cccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCc-----------
Q 048668 182 -------------------TFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPL----------- 231 (725)
Q Consensus 182 -------------------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~----------- 231 (725)
..+....+++.+++.+|.+.... .+... ..++.|.+.+|.+.+..+.
T Consensus 281 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~-~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~ 357 (635)
T 4g8a_A 281 LTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYN-FGWQHLELVNCKFGQFPTLKLKSLKRLTFT 357 (635)
T ss_dssp SEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSC-CCCSEEEEESCEESSCCCCBCTTCCEEEEE
T ss_pred hhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccc-hhhhhhhcccccccCcCcccchhhhhcccc
Confidence 00111123333333333333111 11111 1455555555555433222
Q ss_pred --------ccccccCCceEEecccccCC--CCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCcc
Q 048668 232 --------GIRNLVNLIALAVEVNQLHG--TIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNF 301 (725)
Q Consensus 232 --------~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 301 (725)
....+++|+.|+++.|.+.. ..+..+..+.+|+.+++..|.+.. .+..+..+++|+.+++.+|.+.
T Consensus 358 ~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~--- 433 (635)
T 4g8a_A 358 SNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK--- 433 (635)
T ss_dssp SCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEE---
T ss_pred cccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccc---
Confidence 12345667777777776643 345556666777777777777663 4556677777888888777433
Q ss_pred ccccccccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccc-cccCccccccccCCcEEEccCCc
Q 048668 302 IASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQF-SGMIPVTLSTCVSLEYVDISSNC 380 (725)
Q Consensus 302 ~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~ 380 (725)
...+...+.....+..+++++|.+++..+..+..+++|+.|+|++|.+ .+..|..|..+++|++|+|++|+
T Consensus 434 --------~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~ 505 (635)
T 4g8a_A 434 --------QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 505 (635)
T ss_dssp --------STTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred --------ccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCc
Confidence 334444444444458899999999988999999999999999999975 45678899999999999999999
Q ss_pred cccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC-Ccc-CCCCCcCccCCccccCC
Q 048668 381 FHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK-GVF-SNKSKIPLQGNVRLCGG 456 (725)
Q Consensus 381 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~-~~~~~~~~~~n~~~c~~ 456 (725)
|++++|..|+++++|+.|+|++|+|++..|..|..+++|++|||++|++++.+|.. ..+ ..++.+++++|||.|..
T Consensus 506 L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 506 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred cCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999998875 233 57889999999999953
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.3e-46 Score=435.20 Aligned_cols=402 Identities=21% Similarity=0.239 Sum_probs=347.1
Q ss_pred CcccCCccccCcccCcEEec-CCCccCcc---------------------------------------------------
Q 048668 1 LEGQIPKEIGSLFKLQALAL-AGNYLTGK--------------------------------------------------- 28 (725)
Q Consensus 1 ~~~~ip~~~~~l~~l~~L~l-~~n~l~~~--------------------------------------------------- 28 (725)
|.|.||+.|++|++|++|+| ++|.+.|.
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 57999999999999999999 77755433
Q ss_pred -------------------------CCccccCCCCCcEEEccCCcCCc-----------------cCCCCCC--CCCCCC
Q 048668 29 -------------------------LPDFIGNLSALQVIHIKGNSLGG-----------------KFPTTLG--LLRNLV 64 (725)
Q Consensus 29 -------------------------~~~~~~~l~~L~~L~l~~n~l~~-----------------~~~~~~~--~l~~L~ 64 (725)
+|..|+++++|++|+|++|++++ .+|..++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 88899999999999999999998 3888887 999999
Q ss_pred EEEccCCcccccCcccccccCCCceeeccCCC-CCC-CCChhh------hcCCCCccEEEccCceeeeeCCC--cccccC
Q 048668 65 QLNVAENKFYGMFPRSICNISSLEYFYLTSNR-FSG-SLPFDI------VVNLPNLKELGIGANNFFGLIPD--SLSNAS 134 (725)
Q Consensus 65 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~------~~~l~~L~~L~L~~N~i~~~~~~--~~~~l~ 134 (725)
+|+|++|.+.+.+|..|.++++|++|+|++|+ +++ .+|..+ +..+++|+.|+|++|+++ .+|. .|.+++
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 99999999999999999999999999999998 886 677643 345669999999999999 6677 899999
Q ss_pred ccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCC-CCEEECccCcccccCChhhhhccc
Q 048668 135 NLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSS-LKVLSLSDNQFGGELPHSIANLSS 213 (725)
Q Consensus 135 ~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~ 213 (725)
+|++|+|++|+|+.++ .|..+++|+.|+|++|.++.++ ..+.++++ |++|+|++|+++ .+|..+.....
T Consensus 574 ~L~~L~Ls~N~l~~lp--~~~~L~~L~~L~Ls~N~l~~lp-------~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~ 643 (876)
T 4ecn_A 574 KLGLLDCVHNKVRHLE--AFGTNVKLTDLKLDYNQIEEIP-------EDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV 643 (876)
T ss_dssp TCCEEECTTSCCCBCC--CCCTTSEESEEECCSSCCSCCC-------TTSCEECTTCCEEECCSSCCC-SCCSCCCTTCS
T ss_pred CCCEEECCCCCcccch--hhcCCCcceEEECcCCccccch-------HHHhhccccCCEEECcCCCCC-cCchhhhcccc
Confidence 9999999999999665 8999999999999999998443 34778888 999999999999 78888777652
Q ss_pred -cceeEEecCccceeccCccc---c--cccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcC-C--
Q 048668 214 -TMIVFLIGGNQISGTIPLGI---R--NLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGN-L-- 284 (725)
Q Consensus 214 -~l~~L~l~~n~i~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l-- 284 (725)
.|+.|++++|.+.+.+|... . .+.+|+.|+|++|++..+++..+..+++|+.|+|++|.+. .+|..+.. .
T Consensus 644 ~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~ 722 (876)
T 4ecn_A 644 YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDG 722 (876)
T ss_dssp SCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTS
T ss_pred CCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccc
Confidence 49999999999998766432 2 3458999999999999766666779999999999999999 55554333 2
Q ss_pred -----CCCCEEeCCCCcCCCcccccccccccccccccc--ccccccceecccCCccCCCcchhhhcCCCCCeEEccC---
Q 048668 285 -----TKLAKLDLGSNSLQGNFIASQNKLIGALPQQLL--SITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISS--- 354 (725)
Q Consensus 285 -----~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~--~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~--- 354 (725)
++|++|+|++|+|+ .+|..++ .+..+ +.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 723 ~l~nl~~L~~L~Ls~N~L~------------~lp~~l~~~~l~~L-~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ 788 (876)
T 4ecn_A 723 NYKNTYLLTTIDLRFNKLT------------SLSDDFRATTLPYL-SNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRD 788 (876)
T ss_dssp CCTTGGGCCEEECCSSCCC------------CCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBC
T ss_pred cccccCCccEEECCCCCCc------------cchHHhhhccCCCc-CEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCC
Confidence 39999999999877 7888877 66666 899999999997 788899999999999976
Q ss_pred ---ccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCee
Q 048668 355 ---NQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEG 431 (725)
Q Consensus 355 ---N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 431 (725)
|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+..+.....+..+.|.+|++..
T Consensus 789 ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp TTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred cccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccc
Confidence 888999999999999999999999999 57888766 699999999999998887887776677778888887753
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.9e-47 Score=425.60 Aligned_cols=408 Identities=19% Similarity=0.201 Sum_probs=338.2
Q ss_pred cccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccccc-Cccc
Q 048668 2 EGQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGM-FPRS 80 (725)
Q Consensus 2 ~~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~ 80 (725)
++..|..|.++++|++|+|++|++++..|.+|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++. .|..
T Consensus 39 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 118 (549)
T 2z81_A 39 TYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSL 118 (549)
T ss_dssp CEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCS
T ss_pred CccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhh
Confidence 445678899999999999999999988889999999999999999999988888899999999999999999864 5678
Q ss_pred ccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCccccccc
Q 048668 81 ICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKIL 160 (725)
Q Consensus 81 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L 160 (725)
|+++++|++|++++|++.+.+|...|.++++|++|++++|++++..|..+..+++|++|++++|.+..++...+..+++|
T Consensus 119 ~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 198 (549)
T 2z81_A 119 FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSV 198 (549)
T ss_dssp CTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTB
T ss_pred hhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccc
Confidence 99999999999999995558888888999999999999999999999999999999999999999987766666778999
Q ss_pred CeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCCh----------------------------------
Q 048668 161 WRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPH---------------------------------- 206 (725)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~---------------------------------- 206 (725)
++|++++|.++........ ....+++|++|++++|.+++..+.
T Consensus 199 ~~L~L~~n~l~~~~~~~~~---~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~ 275 (549)
T 2z81_A 199 RYLELRDTNLARFQFSPLP---VDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESD 275 (549)
T ss_dssp SEEEEESCBCTTCCCCCCS---SCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTT
T ss_pred cEEEccCCccccccccccc---hhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchh
Confidence 9999999999865321111 112233444444444433321110
Q ss_pred ----------------------------hhhhccccceeEEecCccceeccCccc-ccccCCceEEecccccCCCCCh--
Q 048668 207 ----------------------------SIANLSSTMIVFLIGGNQISGTIPLGI-RNLVNLIALAVEVNQLHGTIPD-- 255 (725)
Q Consensus 207 ----------------------------~~~~l~~~l~~L~l~~n~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~-- 255 (725)
.+......++.+++++|.+. .+|..+ ..+++|++|++++|++.+..|.
T Consensus 276 ~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 354 (549)
T 2z81_A 276 VVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNS 354 (549)
T ss_dssp CCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHH
T ss_pred hhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccch
Confidence 01122347889999999987 667665 6799999999999999986643
Q ss_pred -hhcCCCCccEEeccCcccccCCC--CCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCc
Q 048668 256 -VIGELKNLQLLGLYKNFLQGSIP--SGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNL 332 (725)
Q Consensus 256 -~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~ 332 (725)
.+..+++|++|++++|++++..+ ..+..+++|++|++++|+++ .+|..+.....+ ++|++++|.
T Consensus 355 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~------------~lp~~~~~~~~L-~~L~Ls~N~ 421 (549)
T 2z81_A 355 ACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH------------PMPDSCQWPEKM-RFLNLSSTG 421 (549)
T ss_dssp TCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC------------CCCSCCCCCTTC-CEEECTTSC
T ss_pred hhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc------------cCChhhcccccc-cEEECCCCC
Confidence 47889999999999999986543 45889999999999999887 677777666666 999999999
Q ss_pred cCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCccc
Q 048668 333 LNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKF 412 (725)
Q Consensus 333 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 412 (725)
+++ +|..+ .++|+.|+|++|++++.+ ..+++|++|+|++|+++ .+|. .+.+++|+.|||++|++++.+|..
T Consensus 422 l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~ 492 (549)
T 2z81_A 422 IRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGI 492 (549)
T ss_dssp CSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTG
T ss_pred ccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHH
Confidence 984 34333 268999999999999753 57889999999999999 5555 567999999999999999999999
Q ss_pred ccCCCCCCeEEcccccCeeecCC
Q 048668 413 LENLSFLEFLNLSYNHLEGEVPT 435 (725)
Q Consensus 413 ~~~l~~L~~L~l~~N~l~~~~p~ 435 (725)
+..+++|+.|++++|++.|.+|.
T Consensus 493 ~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 493 FDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp GGGCTTCCEEECCSSCBCCCHHH
T ss_pred HhcCcccCEEEecCCCccCCCcc
Confidence 99999999999999999999984
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.8e-46 Score=415.45 Aligned_cols=425 Identities=22% Similarity=0.201 Sum_probs=317.9
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||+.+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|+.|+++++|++|+|++|+|+. +|.. .
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~ 88 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--P 88 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--C
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--c
Confidence 5777776 588888888888887666788888888888888888887778888888888888888888874 4443 7
Q ss_pred cCCCceeeccCCCCCC-CCChhhhcCCCCccEEEccCceeeeeCCCcccccCcc--ceecCCCccc--cccCccCccc--
Q 048668 84 ISSLEYFYLTSNRFSG-SLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNL--ELLDLSNNQF--KGKVSIDFSS-- 156 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L--~~L~Ls~N~i--~~~~~~~f~~-- 156 (725)
+++|++|+|++|++++ .+| ..|.++++|++|+|++|++++ ..|..+++| ++|+|++|++ .+..+..|..
T Consensus 89 l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPIC-KEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCC-GGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred cCCccEEeccCCccccccch-hhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccc
Confidence 8888888888888873 233 446788888888888888875 456777777 8888888888 5555555554
Q ss_pred ------------------------ccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhc-
Q 048668 157 ------------------------LKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANL- 211 (725)
Q Consensus 157 ------------------------l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l- 211 (725)
+++|+.|++++|........-.+....+..+++|+.|++++|.+++..+..+...
T Consensus 165 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~ 244 (520)
T 2z7x_B 165 TESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLV 244 (520)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHH
T ss_pred cceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHh
Confidence 3444444444443000000000001134556667777777666664433332221
Q ss_pred -cccceeEEecCccceeccCccc-----ccccCCceEEecccccCCCCChhhcCC---CCccEEeccCcccccCCCCCCc
Q 048668 212 -SSTMIVFLIGGNQISGTIPLGI-----RNLVNLIALAVEVNQLHGTIPDVIGEL---KNLQLLGLYKNFLQGSIPSGLG 282 (725)
Q Consensus 212 -~~~l~~L~l~~n~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~ 282 (725)
...++.|++++|.+.+.+|..+ ..+++|+.++++.|.+ ..++..+..+ .+|++|++++|.+.... .+.
T Consensus 245 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~ 321 (520)
T 2z7x_B 245 WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPS 321 (520)
T ss_dssp HTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCS
T ss_pred hhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chh
Confidence 1278889999999988888888 8889999999999988 3443556555 67999999999876432 126
Q ss_pred CCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCC--CcchhhhcCCCCCeEEccCcccccc
Q 048668 283 NLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNG--SLPQQVGNLKNLIILDISSNQFSGM 360 (725)
Q Consensus 283 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~ 360 (725)
.+++|++|++++|++++ .+|..+..+..+ ++|++++|++++ ..|..+..+++|++|++++|.+++.
T Consensus 322 ~l~~L~~L~Ls~n~l~~-----------~~~~~~~~l~~L-~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 389 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTD-----------TVFENCGHLTEL-ETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYD 389 (520)
T ss_dssp SCCCCCEEECCSSCCCT-----------TTTTTCCCCSSC-CEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCC
T ss_pred hCCcccEEEeECCccCh-----------hhhhhhccCCCC-CEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcc
Confidence 88999999999997763 466666666666 899999999986 4567899999999999999999984
Q ss_pred Ccc-ccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCC-CCc
Q 048668 361 IPV-TLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPT-KGV 438 (725)
Q Consensus 361 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~ 438 (725)
+|. .+..+++|++|+|++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+++..++. ...
T Consensus 390 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 466 (520)
T 2z7x_B 390 EKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDR 466 (520)
T ss_dssp GGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhcc
Confidence 554 588899999999999999888777664 78999999999999 6777777999999999999999976654 345
Q ss_pred cCCCCCcCccCCccccC
Q 048668 439 FSNKSKIPLQGNVRLCG 455 (725)
Q Consensus 439 ~~~~~~~~~~~n~~~c~ 455 (725)
+..++.+++++|++.|.
T Consensus 467 l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 467 LTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CTTCCEEECCSSCBCCC
T ss_pred CCcccEEECcCCCCccc
Confidence 77888999999998874
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.3e-45 Score=405.69 Aligned_cols=404 Identities=19% Similarity=0.245 Sum_probs=338.4
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccccc-Ccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGM-FPRSI 81 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~ 81 (725)
+..|..|.++++|++|+|++|+|++..|..|+.+++|++|+|++|+|++ +|.. .+++|++|+|++|+++++ .|..|
T Consensus 35 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~ 111 (520)
T 2z7x_B 35 ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEF 111 (520)
T ss_dssp CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGG
T ss_pred ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEeccCCccccccchhhh
Confidence 4445789999999999999999998889999999999999999999995 4544 899999999999999874 68999
Q ss_pred cccCCCceeeccCCCCCCCCChhhhcCCCCc--cEEEccCcee--eeeCCCcccc-------------------------
Q 048668 82 CNISSLEYFYLTSNRFSGSLPFDIVVNLPNL--KELGIGANNF--FGLIPDSLSN------------------------- 132 (725)
Q Consensus 82 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L--~~L~L~~N~i--~~~~~~~~~~------------------------- 132 (725)
+++++|++|++++|+|++ ..+..+++| +.|+|++|.+ .+..|..|..
T Consensus 112 ~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~ 187 (520)
T 2z7x_B 112 GNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVK 187 (520)
T ss_dssp GGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCT
T ss_pred ccCCcceEEEecCcccch----hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhh
Confidence 999999999999999983 345678888 9999999999 6666665554
Q ss_pred -cCccceecCCCcc-------ccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccC
Q 048668 133 -ASNLELLDLSNNQ-------FKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGEL 204 (725)
Q Consensus 133 -l~~L~~L~Ls~N~-------i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 204 (725)
+++|+.|++++|. +.+..+ .|..+++|+.|++++|.++....... ... ...++|++|++++|++++.+
T Consensus 188 ~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~--~~~-~~~~~L~~L~l~~n~l~~~~ 263 (520)
T 2z7x_B 188 TVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRI--LQL-VWHTTVWYFSISNVKLQGQL 263 (520)
T ss_dssp TCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHH--HHH-HHTSSCSEEEEEEEEEESCC
T ss_pred cccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHH--HHH-hhhCcccEEEeecccccCcc
Confidence 7788999999987 655544 78899999999999998864322110 011 12469999999999999999
Q ss_pred Chhh-----hhccccceeEEecCccceeccC-cccccc---cCCceEEecccccCCCCChhhcCCCCccEEeccCccccc
Q 048668 205 PHSI-----ANLSSTMIVFLIGGNQISGTIP-LGIRNL---VNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG 275 (725)
Q Consensus 205 p~~~-----~~l~~~l~~L~l~~n~i~~~~~-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 275 (725)
|..+ ..+. .++.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|.+.+
T Consensus 264 p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~ 338 (520)
T 2z7x_B 264 DFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTD 338 (520)
T ss_dssp CCCCCCCCSCCCC-EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCT
T ss_pred ccchhhcccccCc-eeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccCh
Confidence 9988 6776 899999999999 555 555555 67999999999987543 23688999999999999999
Q ss_pred CCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcch-hhhcCCCCCeEEccC
Q 048668 276 SIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQ-QVGNLKNLIILDISS 354 (725)
Q Consensus 276 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~ 354 (725)
..|..+..+++|++|++++|++++ .+.+|..+..+..+ ++|++++|.+++.+|. .+..+++|+.|++++
T Consensus 339 ~~~~~~~~l~~L~~L~L~~N~l~~---------l~~~~~~~~~l~~L-~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~ 408 (520)
T 2z7x_B 339 TVFENCGHLTELETLILQMNQLKE---------LSKIAEMTTQMKSL-QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408 (520)
T ss_dssp TTTTTCCCCSSCCEEECCSSCCCB---------HHHHHHHHTTCTTC-CEEECCSSCCBCCGGGCSCCCCTTCCEEECCS
T ss_pred hhhhhhccCCCCCEEEccCCccCc---------cccchHHHhhCCCC-CEEECCCCcCCcccccchhccCccCCEEECcC
Confidence 899999999999999999998772 11344555666666 8999999999984554 588899999999999
Q ss_pred ccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecC
Q 048668 355 NQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVP 434 (725)
Q Consensus 355 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 434 (725)
|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++...+..|..+++|++|++++|+++|.++
T Consensus 409 N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 409 NILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999988887765 79999999999999 778888899999999999999996555559999999999999999999887
Q ss_pred C
Q 048668 435 T 435 (725)
Q Consensus 435 ~ 435 (725)
.
T Consensus 486 ~ 486 (520)
T 2z7x_B 486 R 486 (520)
T ss_dssp H
T ss_pred c
Confidence 4
No 22
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.2e-44 Score=391.25 Aligned_cols=380 Identities=20% Similarity=0.218 Sum_probs=289.8
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCc-cCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGG-KFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
++|+ +. ++|++|+|++|.|++..|..|+.+++|++|+|++|++.+ +.+..|.++++|++|+|++|++++..|..|.
T Consensus 24 ~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 100 (455)
T 3v47_A 24 QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFN 100 (455)
T ss_dssp SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTT
T ss_pred cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhcc
Confidence 4666 43 478888888888887778888888888888888888863 4467788888888888888888888888888
Q ss_pred ccCCCceeeccCCCCCCCCC-hhhhcCCCCccEEEccCceeeeeCCCc-ccccCccceecCCCccccccCccCcccc--c
Q 048668 83 NISSLEYFYLTSNRFSGSLP-FDIVVNLPNLKELGIGANNFFGLIPDS-LSNASNLELLDLSNNQFKGKVSIDFSSL--K 158 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~-~~~~~~l~~L~~L~L~~N~i~~~~~~~-~~~l~~L~~L~Ls~N~i~~~~~~~f~~l--~ 158 (725)
++++|++|+|++|++++.++ ...|..+++|++|+|++|+++++.|.. |.++++|++|+|++|+++++.+..+..+ .
T Consensus 101 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~ 180 (455)
T 3v47_A 101 GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGK 180 (455)
T ss_dssp TCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTC
T ss_pred CcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccc
Confidence 88888888888888874333 334678888888888888888877765 7888888888888888888888877776 6
Q ss_pred ccCeeecCCccCCccCCCCccc--ccccCCCCCCCEEECccCcccccCChhhhhcc--ccceeEEecCccceeccCcccc
Q 048668 159 ILWRLNLEQNNLGIGAANDLGF--VTFLTNCSSLKVLSLSDNQFGGELPHSIANLS--STMIVFLIGGNQISGTIPLGIR 234 (725)
Q Consensus 159 ~L~~L~L~~N~l~~~~~~~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~~l~~L~l~~n~i~~~~~~~~~ 234 (725)
+|+.|++++|.+.......+.. ...+..+++|++|++++|++++..|..+.... ..++.|.+++|.+.+..
T Consensus 181 ~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~----- 255 (455)
T 3v47_A 181 HFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS----- 255 (455)
T ss_dssp EEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC-----
T ss_pred cccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc-----
Confidence 7888888888887665432211 01133567888888888888877777766552 25555555555543221
Q ss_pred cccCCceEEecccccCCCCChhhcCC--CCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccc
Q 048668 235 NLVNLIALAVEVNQLHGTIPDVIGEL--KNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGAL 312 (725)
Q Consensus 235 ~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 312 (725)
+..+.+.+..+..+.++ ++|++|++++|.+.+..|..|..+++|++|++++|+++
T Consensus 256 ---------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-------------- 312 (455)
T 3v47_A 256 ---------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN-------------- 312 (455)
T ss_dssp ---------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC--------------
T ss_pred ---------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccc--------------
Confidence 11122222223333332 46777777777777666777777777766666666443
Q ss_pred cccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCC
Q 048668 313 PQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFL 392 (725)
Q Consensus 313 p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 392 (725)
+..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+
T Consensus 313 ----------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 313 ----------------------KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp ----------------------EECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred ----------------------ccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 3456678888999999999999998889999999999999999999999889999999
Q ss_pred CCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC
Q 048668 393 KSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK 436 (725)
Q Consensus 393 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 436 (725)
++|+.|+|++|++++..+..|..+++|++|++++|+++|.+|..
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 99999999999999888888899999999999999999999864
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.6e-44 Score=400.86 Aligned_cols=411 Identities=19% Similarity=0.185 Sum_probs=261.4
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
.+++++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|+++.|.+|.++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 356666666665 3554443 5666666666666655555666666666666666666655566666666666666666
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeC-CCcccccCccceecCCCccccccCccCccccccc--CeeecCCccC-
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLI-PDSLSNASNLELLDLSNNQFKGKVSIDFSSLKIL--WRLNLEQNNL- 170 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L--~~L~L~~N~l- 170 (725)
|+|+ .+|.. .+++|++|+|++|+++++. |..|+++++|++|+|++|+|+.. .|..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 110 NRLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp SCCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CcCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 6665 55544 4566666666666665533 35566666666666666665542 33444444 6666666655
Q ss_pred -CccCCCCccc--------------------ccccCCCCCCCEEECccCc----------------------------cc
Q 048668 171 -GIGAANDLGF--------------------VTFLTNCSSLKVLSLSDNQ----------------------------FG 201 (725)
Q Consensus 171 -~~~~~~~~~~--------------------~~~~~~l~~L~~L~L~~N~----------------------------l~ 201 (725)
+...+..+.. ...+.++++|+.|++++|+ +.
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCc
Confidence 3222211110 0123345566666666653 22
Q ss_pred ccC----ChhhhhccccceeEEecCccceeccCccc-----ccccCCceEEecccccCCCCChhhcCC---CCccEEecc
Q 048668 202 GEL----PHSIANLSSTMIVFLIGGNQISGTIPLGI-----RNLVNLIALAVEVNQLHGTIPDVIGEL---KNLQLLGLY 269 (725)
Q Consensus 202 ~~~----p~~~~~l~~~l~~L~l~~n~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~ 269 (725)
+.. +..+ .. ..++.|++++|.+.+.+|..+ ..++.|+.++++.|.+ ..+...+..+ .+|++|+++
T Consensus 263 ~~~~~~~~~~~-~~-~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~ 339 (562)
T 3a79_B 263 WKCSVKLFQFF-WP-RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKEALYSVFAEMNIKMLSIS 339 (562)
T ss_dssp HHHHHHHHHHH-TT-SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTCCCSEEEEE
T ss_pred HHHHHHHHHhh-hc-ccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecChhhhhhhhccCcceEEEcc
Confidence 110 1111 11 167788888888887777766 5666666666666666 2222333322 568888888
Q ss_pred CcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCC--cchhhhcCCCC
Q 048668 270 KNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGS--LPQQVGNLKNL 347 (725)
Q Consensus 270 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~--~~~~~~~l~~L 347 (725)
+|.+.... ....+++|++|++++|++++ .+|..+..+..+ ++|++++|++++. .|..|..+++|
T Consensus 340 ~n~~~~~~--~~~~l~~L~~L~l~~n~l~~-----------~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~~~l~~L 405 (562)
T 3a79_B 340 DTPFIHMV--CPPSPSSFTFLNFTQNVFTD-----------SVFQGCSTLKRL-QTLILQRNGLKNFFKVALMTKNMSSL 405 (562)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCT-----------TTTTTCCSCSSC-CEEECCSSCCCBTTHHHHTTTTCTTC
T ss_pred CCCccccc--CccCCCCceEEECCCCcccc-----------chhhhhcccCCC-CEEECCCCCcCCcccchhhhcCCCCC
Confidence 88775322 12577888888888886662 455566566665 8888888888863 34668888888
Q ss_pred CeEEccCccccccCc-cccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEccc
Q 048668 348 IILDISSNQFSGMIP-VTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSY 426 (725)
Q Consensus 348 ~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 426 (725)
+.|++++|.+++.+| ..+..+++|++|+|++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++
T Consensus 406 ~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~ 482 (562)
T 3a79_B 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVAS 482 (562)
T ss_dssp CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCS
T ss_pred CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCC
Confidence 999999888887344 4578888888999999888876666554 68888899998888 5666666888888999999
Q ss_pred ccCeeecCC-CCccCCCCCcCccCCccccC
Q 048668 427 NHLEGEVPT-KGVFSNKSKIPLQGNVRLCG 455 (725)
Q Consensus 427 N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~ 455 (725)
|++++.++. ...++.++.+++++|+|.|.
T Consensus 483 N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 483 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp SCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred CCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 988866554 45567788888888888774
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.7e-43 Score=398.87 Aligned_cols=405 Identities=20% Similarity=0.262 Sum_probs=324.7
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||..+. ++|++|+|++|.|++..|.+|..+++|++|+|++|+++++.|++|.++++|++|+|++|+|+. +|.. .
T Consensus 45 ~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~ 119 (562)
T 3a79_B 45 HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC--P 119 (562)
T ss_dssp SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC--C
T ss_pred cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc--c
Confidence 5888776 599999999999998777899999999999999999999999999999999999999999995 4444 8
Q ss_pred cCCCceeeccCCCCCCCCCh-hhhcCCCCccEEEccCceeeeeCCCcccccCcc--ceecCCCccc--cccCccCccc--
Q 048668 84 ISSLEYFYLTSNRFSGSLPF-DIVVNLPNLKELGIGANNFFGLIPDSLSNASNL--ELLDLSNNQF--KGKVSIDFSS-- 156 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L--~~L~Ls~N~i--~~~~~~~f~~-- 156 (725)
+++|++|+|++|+++ .+|. ..|.++++|++|+|++|+++. ..|..+++| ++|+|++|++ ++..+..|..
T Consensus 120 l~~L~~L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 120 MASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp CTTCSEEECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred cccCCEEECCCCCcc-ccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccC
Confidence 999999999999998 6653 567899999999999999975 356666666 9999999999 7666666654
Q ss_pred ------------------------ccccCeeecCCccCCcc------------C------CCC--------cccccccCC
Q 048668 157 ------------------------LKILWRLNLEQNNLGIG------------A------AND--------LGFVTFLTN 186 (725)
Q Consensus 157 ------------------------l~~L~~L~L~~N~l~~~------------~------~~~--------~~~~~~~~~ 186 (725)
+++|+.|++++|..... . ... ...+. ...
T Consensus 196 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~-~~~ 274 (562)
T 3a79_B 196 TTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQ-FFW 274 (562)
T ss_dssp EEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHH-HHT
T ss_pred cceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHH-hhh
Confidence 45677777777641100 0 000 00000 112
Q ss_pred CCCCCEEECccCcccccCChhh-----hhccccceeEEecCccceeccC-cccccc---cCCceEEecccccCCCCChhh
Q 048668 187 CSSLKVLSLSDNQFGGELPHSI-----ANLSSTMIVFLIGGNQISGTIP-LGIRNL---VNLIALAVEVNQLHGTIPDVI 257 (725)
Q Consensus 187 l~~L~~L~L~~N~l~~~~p~~~-----~~l~~~l~~L~l~~n~i~~~~~-~~~~~l---~~L~~L~L~~N~l~~~~~~~~ 257 (725)
.++|++|++++|++++.+|..+ ..+. .+..+++..|.+ .+| ..+..+ .+|+.|++++|.+.... .+
T Consensus 275 ~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~-~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~ 349 (562)
T 3a79_B 275 PRPVEYLNIYNLTITERIDREEFTYSETALK-SLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CP 349 (562)
T ss_dssp TSSEEEEEEEEEEECSCCCCCCCCCCSCSCC-EEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CC
T ss_pred cccccEEEEeccEeeccccchhhhcccccch-heehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--Cc
Confidence 3489999999999999999887 4444 566666766666 344 333322 57999999999986432 12
Q ss_pred cCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCC-C
Q 048668 258 GELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNG-S 336 (725)
Q Consensus 258 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~-~ 336 (725)
..+++|++|++++|.+.+..|..+..+++|++|++++|++++ ...+|..+..+..+ ++|++++|.+++ .
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------~~~~~~~~~~l~~L-~~L~l~~N~l~~~~ 419 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKN---------FFKVALMTKNMSSL-ETLDVSLNSLNSHA 419 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCB---------TTHHHHTTTTCTTC-CEEECTTSCCBSCC
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCC---------cccchhhhcCCCCC-CEEECCCCcCCCcc
Confidence 678999999999999999899999999999999999998872 11233445555666 899999999998 4
Q ss_pred cchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCC
Q 048668 337 LPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENL 416 (725)
Q Consensus 337 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 416 (725)
.+..+..+++|+.|++++|++++..|..+. ++|++|+|++|+++ .+|..+..+++|+.|+|++|+++++.+..+..+
T Consensus 420 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 496 (562)
T 3a79_B 420 YDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRL 496 (562)
T ss_dssp SSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTC
T ss_pred ChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcC
Confidence 445688999999999999999987777665 69999999999999 567777799999999999999996555559999
Q ss_pred CCCCeEEcccccCeeecCCC
Q 048668 417 SFLEFLNLSYNHLEGEVPTK 436 (725)
Q Consensus 417 ~~L~~L~l~~N~l~~~~p~~ 436 (725)
++|+.|++++|+|+|.++..
T Consensus 497 ~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 497 TSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp TTCCCEECCSCCBCCCHHHH
T ss_pred CCCCEEEecCCCcCCCcchH
Confidence 99999999999999988753
No 25
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.3e-42 Score=398.42 Aligned_cols=416 Identities=21% Similarity=0.208 Sum_probs=332.2
Q ss_pred CccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccC
Q 048668 6 PKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNIS 85 (725)
Q Consensus 6 p~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 85 (725)
|..|.++++|++|+|++|+|++..+.+|.++++|++|+|++|+|++..+++|.++++|++|+|++|+|+++.+.+|++++
T Consensus 69 ~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~ 148 (635)
T 4g8a_A 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK 148 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCT
T ss_pred HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCc
Confidence 45799999999999999999987788999999999999999999988889999999999999999999988888999999
Q ss_pred CCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccc----eecCCCccccccCccCcccccccC
Q 048668 86 SLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLE----LLDLSNNQFKGKVSIDFSSLKILW 161 (725)
Q Consensus 86 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~----~L~Ls~N~i~~~~~~~f~~l~~L~ 161 (725)
+|++|+|++|++++......+..+++|++|+|++|+|+++.+..|..+.+++ .++++.|+++.+.+..+..+ .+.
T Consensus 149 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~-~~~ 227 (635)
T 4g8a_A 149 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLH 227 (635)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEE
T ss_pred ccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccch-hhh
Confidence 9999999999998322345668899999999999999999998887776654 67888888877665444322 112
Q ss_pred eeecCCccCC-------------------------------------------------------ccC---CC-------
Q 048668 162 RLNLEQNNLG-------------------------------------------------------IGA---AN------- 176 (725)
Q Consensus 162 ~L~L~~N~l~-------------------------------------------------------~~~---~~------- 176 (725)
.+++++|... ... ..
T Consensus 228 ~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (635)
T 4g8a_A 228 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTN 307 (635)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTT
T ss_pred hhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcc
Confidence 2222222100 000 00
Q ss_pred ---------CcccccccCCCCCCCEEECccCcccccCChh-------------------hhhccccceeEEecCccce--
Q 048668 177 ---------DLGFVTFLTNCSSLKVLSLSDNQFGGELPHS-------------------IANLSSTMIVFLIGGNQIS-- 226 (725)
Q Consensus 177 ---------~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-------------------~~~l~~~l~~L~l~~n~i~-- 226 (725)
...-...+.....++.|++++|.+....+.. ...++ .++.+++++|.+.
T Consensus 308 l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~-~L~~L~ls~n~l~~~ 386 (635)
T 4g8a_A 308 VSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP-SLEFLDLSRNGLSFK 386 (635)
T ss_dssp CSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT-TCCEEECCSSCCBEE
T ss_pred cccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc-ccccchhhccccccc
Confidence 0000012334456667777666655332222 22334 7889999999885
Q ss_pred eccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCC-CCCcCCCCCCEEeCCCCcCCCcccccc
Q 048668 227 GTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIP-SGLGNLTKLAKLDLGSNSLQGNFIASQ 305 (725)
Q Consensus 227 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~ 305 (725)
+..+..+..+.+|+.+++..|.+... +..+..+++|+.+++..|......+ ..|..+++++.++++.|.++
T Consensus 387 ~~~~~~~~~~~~L~~L~~~~~~~~~~-~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~------- 458 (635)
T 4g8a_A 387 GCCSQSDFGTISLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR------- 458 (635)
T ss_dssp EECCHHHHSCSCCCEEECCSCSEEEE-CSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCE-------
T ss_pred cccccchhhhhhhhhhhccccccccc-cccccccccccchhhhhccccccccccccccccccccccccccccc-------
Confidence 34566777889999999999998754 5568889999999999988775544 46889999999999999776
Q ss_pred ccccccccccccccccccceecccCCcc-CCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccc
Q 048668 306 NKLIGALPQQLLSITTLSLYLDLSNNLL-NGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGI 384 (725)
Q Consensus 306 ~~~~~~~p~~~~~~~~ll~~L~L~~n~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 384 (725)
.++...+.....++.|++++|.+ .+..|..|..+++|++|+|++|+|++..|.+|.++++|++|+|++|+|++.
T Consensus 459 -----~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l 533 (635)
T 4g8a_A 459 -----VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 533 (635)
T ss_dssp -----ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBC
T ss_pred -----cccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCC
Confidence 44444555455558999999975 456788899999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCEEeCCCCcccccCcccccCC-CCCCeEEcccccCeeecCCC
Q 048668 385 IPPSLGFLKSIKFLDVSCNNFSGQFPKFLENL-SFLEFLNLSYNHLEGEVPTK 436 (725)
Q Consensus 385 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~ 436 (725)
.|..|+.+++|+.|||++|+|++..|..|..+ ++|++|+|++|+|+|.+...
T Consensus 534 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 534 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp CCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred ChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 99999999999999999999999999999998 68999999999999998753
No 26
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-42 Score=380.13 Aligned_cols=390 Identities=19% Similarity=0.164 Sum_probs=288.1
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccc-ccCcccccccCCCceeecc
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFY-GMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~ 93 (725)
-+.++.+++.++ .+|. +. ++|++|+|++|++++..|..|.++++|++|+|++|.+. .+.+..|.++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 456777888877 5666 33 67888888888888777888888888888888888776 3446678888888888888
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCC--CcccccCccceecCCCccccccCccC-cccccccCeeecCCccC
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIP--DSLSNASNLELLDLSNNQFKGKVSID-FSSLKILWRLNLEQNNL 170 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~--~~~~~l~~L~~L~Ls~N~i~~~~~~~-f~~l~~L~~L~L~~N~l 170 (725)
+|+++ .++...|.++++|++|+|++|++++..+ ..|..+++|++|+|++|+|+++.+.. |..+++|++|++++|.+
T Consensus 88 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 166 (455)
T 3v47_A 88 YNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166 (455)
T ss_dssp TCTTC-EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB
T ss_pred CCccC-ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc
Confidence 88887 5555556778888888888888876333 33777788888888888887776554 67777777777777777
Q ss_pred CccCCCCcccccccCCC--CCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccc
Q 048668 171 GIGAANDLGFVTFLTNC--SSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ 248 (725)
Q Consensus 171 ~~~~~~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 248 (725)
+...+.. +.++ .+|+.|++++|.+.+..+..+.. .....+..+++|++|++++|+
T Consensus 167 ~~~~~~~------l~~l~~~~L~~L~l~~n~l~~~~~~~~~~-----------------~~~~~~~~~~~L~~L~Ls~n~ 223 (455)
T 3v47_A 167 KSICEED------LLNFQGKHFTLLRLSSITLQDMNEYWLGW-----------------EKCGNPFKNTSITTLDLSGNG 223 (455)
T ss_dssp SCCCTTT------SGGGTTCEEEEEECTTCBCTTCSTTCTTH-----------------HHHCCTTTTCEEEEEECTTSC
T ss_pred cccChhh------hhccccccccccccccCcccccchhhccc-----------------cccccccccceeeeEecCCCc
Confidence 6554422 2222 46666666666666332221111 011223456778888888888
Q ss_pred cCCCCChhhcCC---CCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCcccccccccccccccccccc-ccccc
Q 048668 249 LHGTIPDVIGEL---KNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSI-TTLSL 324 (725)
Q Consensus 249 l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~-~~ll~ 324 (725)
+.+..|..+... ++|+.|++++|.+.+... ..+.+. +..+..+... ...++
T Consensus 224 l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~-----------~~~~~~~~~~~~~~L~ 278 (455)
T 3v47_A 224 FKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFK-----------DPDNFTFKGLEASGVK 278 (455)
T ss_dssp CCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSC-----------CCCTTTTGGGTTSCCC
T ss_pred ccccchhhhhccccccceeeEeecccccccccc--------------chhhhc-----------cCcccccccccccCce
Confidence 887777766554 678888888877653211 111111 0001111111 12238
Q ss_pred eecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCc
Q 048668 325 YLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNN 404 (725)
Q Consensus 325 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 404 (725)
+|++++|.+++..|..|+.+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..|+.+++|+.|+|++|+
T Consensus 279 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 358 (455)
T 3v47_A 279 TCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNH 358 (455)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSC
T ss_pred EEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCc
Confidence 89999999998889999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred ccccCcccccCCCCCCeEEcccccCeeecCCC-CccCCCCCcCccCCccccCCC
Q 048668 405 FSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK-GVFSNKSKIPLQGNVRLCGGI 457 (725)
Q Consensus 405 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 457 (725)
+++..|.+|..+++|++|+|++|++++.++.. ..++.++.+++++|++.|..+
T Consensus 359 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 359 IRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999999999999999999999877754 567889999999999988643
No 27
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=370.33 Aligned_cols=349 Identities=20% Similarity=0.218 Sum_probs=263.8
Q ss_pred eeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCc
Q 048668 89 YFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168 (725)
Q Consensus 89 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N 168 (725)
.++++++.++ .+|..+ .++++.|+|++|+|+++.+..|.++++|++|+|++|.|+++.+..|..+++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4444555554 444432 234555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccc
Q 048668 169 NLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ 248 (725)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 248 (725)
.++.++. ..|.++++|++|+|++|++++..|..|..++ +|+.|++++|.+.+..+..|.++++|++|+|++|+
T Consensus 91 ~l~~~~~------~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 91 RLKLIPL------GVFTGLSNLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp CCCSCCT------TSSTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred cCCccCc------ccccCCCCCCEEECCCCccccCChhHccccc-cCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 5544333 2344555566666666666555555555555 56666666666666677788889999999999999
Q ss_pred cCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecc
Q 048668 249 LHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDL 328 (725)
Q Consensus 249 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L 328 (725)
++++.+..|..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+ .+.+|...+....+ ++|++
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~-----------~~~~~~~~~~~~~L-~~L~l 231 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY-----------LDTMTPNCLYGLNL-TSLSI 231 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT-----------CCEECTTTTTTCCC-SEEEE
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc-----------ccccCcccccCccc-cEEEC
Confidence 9988888899999999999999999988888999999999999999843 34677777766655 89999
Q ss_pred cCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCccccc
Q 048668 329 SNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQ 408 (725)
Q Consensus 329 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 408 (725)
++|.+++..+..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++.
T Consensus 232 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 232 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp ESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCC
T ss_pred cCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCcee
Confidence 99999977768899999999999999999988889999999999999999999999999999999999999999999998
Q ss_pred CcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCCCCC
Q 048668 409 FPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGIDEL 460 (725)
Q Consensus 409 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~ 460 (725)
.+..|..+++|++|+|++|+|.|.++..+.+.......+.++...|..+...
T Consensus 312 ~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~~ 363 (477)
T 2id5_A 312 EESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFV 363 (477)
T ss_dssp CGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGGG
T ss_pred CHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCchHH
Confidence 8889999999999999999999998765444555556677888889876543
No 28
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=8.9e-41 Score=364.13 Aligned_cols=358 Identities=24% Similarity=0.302 Sum_probs=232.7
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCC-------------cEEEccCCcCCccCCCCCCCCCCCCEEEcc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSAL-------------QVIHIKGNSLGGKFPTTLGLLRNLVQLNVA 69 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L-------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 69 (725)
|+||++|+++++|++|++++|.+++.+|..++.+++| ++|++++|++++. |.. .++|++|+|+
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~~---~~~L~~L~l~ 99 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PEL---PPHLESLVAS 99 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CSC---CTTCSEEECC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CCC---cCCCCEEEcc
Confidence 6777778888888888888887777777777777764 7788888887743 332 3677888888
Q ss_pred CCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCcccccc
Q 048668 70 ENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGK 149 (725)
Q Consensus 70 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 149 (725)
+|.+++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|+++++ | .|+++++|++|++++|+++++
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~l 168 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEKL-P-ELQNSSFLKIIDVDNNSLKKL 168 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCCC-c-ccCCCCCCCEEECCCCcCccc
Confidence 888775 4433 367888888888877 45431 26788888888888763 4 477888888888888888765
Q ss_pred CccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceecc
Q 048668 150 VSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTI 229 (725)
Q Consensus 150 ~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~ 229 (725)
+.. .++|++|++++|.++.++ .+.++++|++|++++|++++ +|.. +..++.|++++|.+. .+
T Consensus 169 p~~----~~~L~~L~L~~n~l~~l~--------~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~l 230 (454)
T 1jl5_A 169 PDL----PPSLEFIAAGNNQLEELP--------ELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-EL 230 (454)
T ss_dssp CCC----CTTCCEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SC
T ss_pred CCC----cccccEEECcCCcCCcCc--------cccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-cc
Confidence 432 247788888888776542 25677888888888888774 4432 236778888888877 55
Q ss_pred CcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCcccccccccc
Q 048668 230 PLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLI 309 (725)
Q Consensus 230 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 309 (725)
| .+..+++|++|++++|+++++. .. +++|++|++++|++.+ +|.. .++|++|++++|++++
T Consensus 231 p-~~~~l~~L~~L~l~~N~l~~l~-~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~---------- 291 (454)
T 1jl5_A 231 P-ELQNLPFLTTIYADNNLLKTLP-DL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG---------- 291 (454)
T ss_dssp C-CCTTCTTCCEEECCSSCCSSCC-SC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE----------
T ss_pred c-ccCCCCCCCEEECCCCcCCccc-cc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc----------
Confidence 6 3777888888888888887643 22 3678888888888775 4443 3678888888887662
Q ss_pred ccccccccccccccceecccCCccCCCcchhhhcC-CCCCeEEccCccccccCccccccccCCcEEEccCCccccccCcc
Q 048668 310 GALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNL-KNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPS 388 (725)
Q Consensus 310 ~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 388 (725)
+|. ....+++|++++|.+++. + .+ ++|+.|++++|++++ +|.. +++|++|++++|++++ +|.
T Consensus 292 --l~~----~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~- 354 (454)
T 1jl5_A 292 --LSE----LPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE- 354 (454)
T ss_dssp --ESC----CCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC-
T ss_pred --ccC----cCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc-
Confidence 221 112337788888888742 2 23 478888888888885 4443 4678888888888884 444
Q ss_pred ccCCCCCCEEeCCCCcccc--cCcccccCC-------------CCCCeEEcccccCee
Q 048668 389 LGFLKSIKFLDVSCNNFSG--QFPKFLENL-------------SFLEFLNLSYNHLEG 431 (725)
Q Consensus 389 ~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l-------------~~L~~L~l~~N~l~~ 431 (725)
.+++|+.|++++|++++ .+|..+..+ ++|+.||+++|++++
T Consensus 355 --~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 355 --LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp --CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred --hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 46788888888888887 677777766 678888888888876
No 29
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.4e-40 Score=360.62 Aligned_cols=348 Identities=28% Similarity=0.384 Sum_probs=246.6
Q ss_pred cccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 12 LFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 12 l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
++++++|++++|.++ .+|. +..+++|++|+|++|++++..+ |.++++|++|+|++|.+++..+ +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 556777777777776 3443 6677777777777777775544 7777777777777777775444 77777777777
Q ss_pred ccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 92 LTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 92 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
+++|.++ .++. +..+++|++|++++|.++++. .+..+++|++|+++ |.+.++.+ +..+++|++|++++|.++
T Consensus 119 L~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQIT-DIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCC-CCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCC-CChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 7777776 4543 567777777777777776542 46777777777775 45544432 666777777777777765
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCC
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHG 251 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 251 (725)
.++ .+..+++|++|++++|.+++..| ++.+++|++|++++|++.+
T Consensus 191 ~~~--------~l~~l~~L~~L~l~~n~l~~~~~---------------------------~~~l~~L~~L~l~~n~l~~ 235 (466)
T 1o6v_A 191 DIS--------VLAKLTNLESLIATNNQISDITP---------------------------LGILTNLDELSLNGNQLKD 235 (466)
T ss_dssp CCG--------GGGGCTTCSEEECCSSCCCCCGG---------------------------GGGCTTCCEEECCSSCCCC
T ss_pred CCh--------hhccCCCCCEEEecCCccccccc---------------------------ccccCCCCEEECCCCCccc
Confidence 432 24566667777777766663322 3445666677777776665
Q ss_pred CCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCC
Q 048668 252 TIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNN 331 (725)
Q Consensus 252 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n 331 (725)
. +.+..+++|++|++++|.+.+..+ +..+++|++|++++|+++ .++. +..+..+ +.|++++|
T Consensus 236 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~------------~~~~-~~~l~~L-~~L~L~~n 297 (466)
T 1o6v_A 236 I--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS------------NISP-LAGLTAL-TNLELNEN 297 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCC------------CCGG-GTTCTTC-SEEECCSS
T ss_pred c--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccC------------cccc-ccCCCcc-CeEEcCCC
Confidence 3 346667777777777777765443 666777777777777665 2222 3333333 67777777
Q ss_pred ccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcc
Q 048668 332 LLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPK 411 (725)
Q Consensus 332 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 411 (725)
++++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..++.+++|+.|++++|++++..|
T Consensus 298 ~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~- 370 (466)
T 1o6v_A 298 QLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP- 370 (466)
T ss_dssp CCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-
T ss_pred cccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-
Confidence 7775544 7888999999999999987766 77889999999999999875 578899999999999999998877
Q ss_pred cccCCCCCCeEEcccccCeeecC
Q 048668 412 FLENLSFLEFLNLSYNHLEGEVP 434 (725)
Q Consensus 412 ~~~~l~~L~~L~l~~N~l~~~~p 434 (725)
+..+++|+.|++++|++++.+.
T Consensus 371 -~~~l~~L~~L~l~~n~~~~~p~ 392 (466)
T 1o6v_A 371 -LANLTRITQLGLNDQAWTNAPV 392 (466)
T ss_dssp -GTTCTTCCEEECCCEEEECCCB
T ss_pred -hhcCCCCCEEeccCCcccCCch
Confidence 8899999999999999987543
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-39 Score=355.44 Aligned_cols=345 Identities=19% Similarity=0.194 Sum_probs=212.4
Q ss_pred CCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccccc
Q 048668 5 IPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNI 84 (725)
Q Consensus 5 ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 84 (725)
.|..++++++|++|++++|.+++ +| .|+.+++|++|++++|+++++ | |+.+++|++|+|++|+++++ + ++++
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 34456667777777777777774 34 577777777777777777754 3 66777777777777777654 2 6777
Q ss_pred CCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeee
Q 048668 85 SSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLN 164 (725)
Q Consensus 85 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~ 164 (725)
++|++|++++|+++ .+| +..+++|++|++++|+++++ .++.+++|++|++++|+..+.. .+..+++|++|+
T Consensus 106 ~~L~~L~L~~N~l~-~l~---~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLT-KLD---VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCS-CCC---CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CcCCEEECCCCcCC-eec---CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 77777777777776 454 45677777777777777764 2666777777777777432221 466677777777
Q ss_pred cCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEe
Q 048668 165 LEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAV 244 (725)
Q Consensus 165 L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 244 (725)
+++|+++.++ +..+++|++|++++|++++. .+..++ .|+.|++++|++++ +| +..+++|+.|++
T Consensus 177 ls~n~l~~l~---------l~~l~~L~~L~l~~N~l~~~---~l~~l~-~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 177 CSFNKITELD---------VSQNKLLNRLNCDTNNITKL---DLNQNI-QLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp CCSSCCCCCC---------CTTCTTCCEEECCSSCCSCC---CCTTCT-TCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred CCCCccceec---------cccCCCCCEEECcCCcCCee---ccccCC-CCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 7777776532 34566777777777777643 244444 55566666666654 33 455555666666
Q ss_pred cccccCCCCChhhcCCC-------CccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCcccccccccccccccccc
Q 048668 245 EVNQLHGTIPDVIGELK-------NLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLL 317 (725)
Q Consensus 245 ~~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~ 317 (725)
++|++++.++..+..++ +|++|++++|.+.+.+| +..+++|+
T Consensus 241 ~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~----------------------------- 289 (457)
T 3bz5_A 241 SVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIK----------------------------- 289 (457)
T ss_dssp CSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCC-----------------------------
T ss_pred eCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCC-----------------------------
Confidence 66666554433333322 22333333333332222 23334444
Q ss_pred ccccccceecccCCccCCCcch--------hhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccc
Q 048668 318 SITTLSLYLDLSNNLLNGSLPQ--------QVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSL 389 (725)
Q Consensus 318 ~~~~ll~~L~L~~n~l~~~~~~--------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 389 (725)
.|++++|...+.+|. .+..+++|+.|++++|++++. + ++.+++|+.|++++|++++
T Consensus 290 -------~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~------ 353 (457)
T 3bz5_A 290 -------ELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD------ 353 (457)
T ss_dssp -------CCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB------
T ss_pred -------EEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC------
Confidence 455555544333332 133346777777777777764 2 6777777777777777775
Q ss_pred cCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC
Q 048668 390 GFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK 436 (725)
Q Consensus 390 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 436 (725)
++.|..|++++|.++|. ..+..|..+++++|+++|.+|..
T Consensus 354 --l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 354 --FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp --CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred --ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 24556667777777765 23455777788888888887754
No 31
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.4e-39 Score=354.76 Aligned_cols=374 Identities=24% Similarity=0.292 Sum_probs=272.0
Q ss_pred CccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCC-------------CEEEccCCc
Q 048668 6 PKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNL-------------VQLNVAENK 72 (725)
Q Consensus 6 p~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-------------~~L~Ls~N~ 72 (725)
|+.+ +.+.|++|++++|.+ +.+|++|+++++|++|++++|++.+..|..++.+++| ++|++++|.
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 3444 458899999999999 6999999999999999999999999999999998875 999999999
Q ss_pred ccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCcc
Q 048668 73 FYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSI 152 (725)
Q Consensus 73 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 152 (725)
++++ |.. .++|++|++++|.++ .+|. .+++|++|++++|+++++. .. .++|++|++++|++++++
T Consensus 83 l~~l-p~~---~~~L~~L~l~~n~l~-~lp~----~~~~L~~L~l~~n~l~~l~-~~---~~~L~~L~L~~n~l~~lp-- 147 (454)
T 1jl5_A 83 LSSL-PEL---PPHLESLVASCNSLT-ELPE----LPQSLKSLLVDNNNLKALS-DL---PPLLEYLGVSNNQLEKLP-- 147 (454)
T ss_dssp CSCC-CSC---CTTCSEEECCSSCCS-SCCC----CCTTCCEEECCSSCCSCCC-SC---CTTCCEEECCSSCCSSCC--
T ss_pred cccC-CCC---cCCCCEEEccCCcCC-cccc----ccCCCcEEECCCCccCccc-CC---CCCCCEEECcCCCCCCCc--
Confidence 9864 432 368999999999999 5874 3589999999999998653 22 278999999999999876
Q ss_pred CcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcc
Q 048668 153 DFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLG 232 (725)
Q Consensus 153 ~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~ 232 (725)
.|..+++|++|++++|.++.++. ..++|++|++++|++++ +| .+..++ .|+.|++++|.+++ +|..
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~lp~----------~~~~L~~L~L~~n~l~~-l~-~~~~l~-~L~~L~l~~N~l~~-l~~~ 213 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKKLPD----------LPPSLEFIAAGNNQLEE-LP-ELQNLP-FLTAIYADNNSLKK-LPDL 213 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSCCCC----------CCTTCCEEECCSSCCSS-CC-CCTTCT-TCCEEECCSSCCSS-CCCC
T ss_pred ccCCCCCCCEEECCCCcCcccCC----------CcccccEEECcCCcCCc-Cc-cccCCC-CCCEEECCCCcCCc-CCCC
Confidence 59999999999999999986543 23599999999999996 66 588887 89999999999986 4543
Q ss_pred cccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccc
Q 048668 233 IRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGAL 312 (725)
Q Consensus 233 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 312 (725)
. .+|++|++++|++.. +| .+..+++|++|++++|++++ +|.. +++|++|++++|+++ .+
T Consensus 214 ~---~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~------------~l 272 (454)
T 1jl5_A 214 P---LSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLT------------DL 272 (454)
T ss_dssp C---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCS------------CC
T ss_pred c---CcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCccc------------cc
Confidence 2 589999999999994 45 48999999999999999985 4543 489999999999887 34
Q ss_pred cccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccc-cCCcEEEccCCccccccCccccC
Q 048668 313 PQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTC-VSLEYVDISSNCFHGIIPPSLGF 391 (725)
Q Consensus 313 p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~ 391 (725)
|... ..+++|++++|.+++. |. ..++|+.|++++|++++. + .+ ++|++|++++|++++ +|..
T Consensus 273 ~~~~----~~L~~L~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~--- 335 (454)
T 1jl5_A 273 PELP----QSLTFLDVSENIFSGL-SE---LPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL--- 335 (454)
T ss_dssp CCCC----TTCCEEECCSSCCSEE-SC---CCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---
T ss_pred Cccc----CcCCEEECcCCccCcc-cC---cCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---
Confidence 4432 3348899999999863 21 126899999999999853 2 23 589999999999996 5543
Q ss_pred CCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCee--ecCCC-Ccc-------------CCCCCcCccCCcc
Q 048668 392 LKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEG--EVPTK-GVF-------------SNKSKIPLQGNVR 452 (725)
Q Consensus 392 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~-~~~-------------~~~~~~~~~~n~~ 452 (725)
+++|+.|++++|++++ +|. .+++|++|++++|++++ .+|.. ..+ ..++.+++++|..
T Consensus 336 ~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l 408 (454)
T 1jl5_A 336 PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPL 408 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC----------------------
T ss_pred CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcC
Confidence 5899999999999995 555 47899999999999998 44543 222 4556666666643
No 32
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=354.54 Aligned_cols=349 Identities=19% Similarity=0.181 Sum_probs=252.8
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
-+.++.++++++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|.|+++.|.+|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 468999999998 7787665 6899999999999988899999999999999999999998899999999999999999
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccC
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGA 174 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~ 174 (725)
|+++ .+|..+|.++++|++|+|++|+++++.+..|..+++|++|+|++|+++++.+..|..+++|++|++++|.++.++
T Consensus 90 n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 90 NRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp SCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 9998 889888899999999999999999999999999999999999999999998888888888888888888887654
Q ss_pred CCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCC
Q 048668 175 ANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIP 254 (725)
Q Consensus 175 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 254 (725)
. ..+.++++|+.|+|++|.+.+..+. .|..+++|+.|++++|.+.+.++
T Consensus 169 ~------~~l~~l~~L~~L~l~~n~i~~~~~~-------------------------~~~~l~~L~~L~l~~~~~~~~~~ 217 (477)
T 2id5_A 169 T------EALSHLHGLIVLRLRHLNINAIRDY-------------------------SFKRLYRLKVLEISHWPYLDTMT 217 (477)
T ss_dssp H------HHHTTCTTCCEEEEESCCCCEECTT-------------------------CSCSCTTCCEEEEECCTTCCEEC
T ss_pred h------hHhcccCCCcEEeCCCCcCcEeChh-------------------------hcccCcccceeeCCCCccccccC
Confidence 3 4466778888888888877754333 44555566666666655554444
Q ss_pred hhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccC
Q 048668 255 DVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLN 334 (725)
Q Consensus 255 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~ 334 (725)
.......+|++|++++|.+++..+..|..+++|++|+|++|+++ .
T Consensus 218 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~------------~----------------------- 262 (477)
T 2id5_A 218 PNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS------------T----------------------- 262 (477)
T ss_dssp TTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCC------------E-----------------------
T ss_pred cccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCC------------c-----------------------
Confidence 44444446666666666666433345556666666666665433 1
Q ss_pred CCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCccccc
Q 048668 335 GSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLE 414 (725)
Q Consensus 335 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 414 (725)
..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+....+.. .
T Consensus 263 -~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~-~ 340 (477)
T 2id5_A 263 -IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLL-W 340 (477)
T ss_dssp -ECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGH-H
T ss_pred -cChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchH-h
Confidence 12233444556666666666666666666666666666666666666555555666666666666666665432211 1
Q ss_pred CCCCCCeEEcccccCeeecCC
Q 048668 415 NLSFLEFLNLSYNHLEGEVPT 435 (725)
Q Consensus 415 ~l~~L~~L~l~~N~l~~~~p~ 435 (725)
-...+..+++.++...|..|.
T Consensus 341 ~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 341 VFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp HHTTTTSSCCTTCCCBEEESG
T ss_pred HHhhhhccccCccCceeCCch
Confidence 112233455566666666664
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.4e-38 Score=348.08 Aligned_cols=347 Identities=26% Similarity=0.367 Sum_probs=293.8
Q ss_pred cCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCcc
Q 048668 34 GNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLK 113 (725)
Q Consensus 34 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 113 (725)
..+++|+.|++++|.++. +|+ +..+++|++|+|++|.+++..+ +.++++|++|++++|.++ .++. +.++++|+
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~ 115 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DITP--LANLTNLT 115 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCGG--GTTCTTCC
T ss_pred hHhccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccc-cChh--hcCCCCCC
Confidence 346789999999999984 454 8889999999999999986655 999999999999999998 5554 78999999
Q ss_pred EEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEE
Q 048668 114 ELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVL 193 (725)
Q Consensus 114 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L 193 (725)
+|+|++|.++++.+ +..+++|++|++++|+++++. .+..+++|++|+++ |.+... ..+.++++|++|
T Consensus 116 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~--------~~~~~l~~L~~L 182 (466)
T 1o6v_A 116 GLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDL--------KPLANLTTLERL 182 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCC--------GGGTTCTTCCEE
T ss_pred EEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCc--------hhhccCCCCCEE
Confidence 99999999997754 899999999999999999764 48889999999996 444332 226788899999
Q ss_pred ECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCccc
Q 048668 194 SLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFL 273 (725)
Q Consensus 194 ~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 273 (725)
++++|.+++. ..+..+++|++|++++|.+.+..+ +..+++|++|++++|.+
T Consensus 183 ~l~~n~l~~~---------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 233 (466)
T 1o6v_A 183 DISSNKVSDI---------------------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 233 (466)
T ss_dssp ECCSSCCCCC---------------------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred ECcCCcCCCC---------------------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCc
Confidence 9999887721 135678899999999999998765 78899999999999999
Q ss_pred ccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEcc
Q 048668 274 QGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDIS 353 (725)
Q Consensus 274 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 353 (725)
.+. ..+..+++|++|++++|.+++ ++. +..+..+ ++|++++|.+++..+ +..+++|+.|+++
T Consensus 234 ~~~--~~l~~l~~L~~L~l~~n~l~~------------~~~-~~~l~~L-~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 234 KDI--GTLASLTNLTDLDLANNQISN------------LAP-LSGLTKL-TELKLGANQISNISP--LAGLTALTNLELN 295 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCC------------CGG-GTTCTTC-SEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred ccc--hhhhcCCCCCEEECCCCcccc------------chh-hhcCCCC-CEEECCCCccCcccc--ccCCCccCeEEcC
Confidence 853 468899999999999998873 232 4444555 899999999997654 8999999999999
Q ss_pred CccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeec
Q 048668 354 SNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEV 433 (725)
Q Consensus 354 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 433 (725)
+|++++..+ +..+++|+.|+|++|++++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|++++.+
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~ 369 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLT 369 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCG
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccc
Confidence 999997655 8899999999999999998765 78999999999999999975 47899999999999999999998
Q ss_pred CCCCccCCCCCcCccCCcccc
Q 048668 434 PTKGVFSNKSKIPLQGNVRLC 454 (725)
Q Consensus 434 p~~~~~~~~~~~~~~~n~~~c 454 (725)
| ...++.++.+.+++|++..
T Consensus 370 ~-~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 370 P-LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp G-GTTCTTCCEEECCCEEEEC
T ss_pred h-hhcCCCCCEEeccCCcccC
Confidence 8 5568889999999997755
No 34
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.4e-39 Score=330.62 Aligned_cols=172 Identities=25% Similarity=0.420 Sum_probs=151.6
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
++|+..+.||+|+||+||+|+++.+++.||||++... +....+.+.+|++++++++|||||++++++...+ .
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-----~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE-----K 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 5799999999999999999999999999999999754 2345678999999999999999999999976544 8
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+|||||+||+|.+++++.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 999999999999999998654 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+.+...... ....+.+||+.|||||++
T Consensus 178 la~~~~~~~~~------~~~~~~~GTp~YmAPEvl 206 (311)
T 4aw0_A 178 TAKVLSPESKQ------ARANSFVGTAQYVSPELL 206 (311)
T ss_dssp TCEECCTTTTC------CCBCCCCSCGGGCCHHHH
T ss_pred CceecCCCCCc------ccccCcccCcccCCHHHH
Confidence 99987543211 122347899999999986
No 35
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-38 Score=346.79 Aligned_cols=364 Identities=19% Similarity=0.179 Sum_probs=301.9
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
+++......+.+.+..+..++.+++|++|++++|++++. | .|..+++|++|+|++|+++++ | ++.+++|++|+++
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls 93 (457)
T 3bz5_A 19 NFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACD 93 (457)
T ss_dssp HHHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECC
T ss_pred HHHHHHHHhcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECc
Confidence 355555555666666777899999999999999999965 5 699999999999999999975 4 8999999999999
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCcc-CCc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNN-LGI 172 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~-l~~ 172 (725)
+|+|+ .++ +.++++|++|+|++|+++++ + ++.+++|++|++++|+|+++ .+..+++|++|++++|. +..
T Consensus 94 ~N~l~-~~~---~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~ 163 (457)
T 3bz5_A 94 SNKLT-NLD---VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITK 163 (457)
T ss_dssp SSCCS-CCC---CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCC
T ss_pred CCCCc-eee---cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccc
Confidence 99998 565 67899999999999999986 3 89999999999999999987 38889999999999995 432
Q ss_pred cCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCC
Q 048668 173 GAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT 252 (725)
Q Consensus 173 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 252 (725)
+ .+..+++|++|++++|++++ +| +..++ .++.|++++|.+++. .+..+++|++|++++|+++++
T Consensus 164 ~---------~~~~l~~L~~L~ls~n~l~~-l~--l~~l~-~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i 227 (457)
T 3bz5_A 164 L---------DVTPQTQLTTLDCSFNKITE-LD--VSQNK-LLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI 227 (457)
T ss_dssp C---------CCTTCTTCCEEECCSSCCCC-CC--CTTCT-TCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC
T ss_pred c---------ccccCCcCCEEECCCCccce-ec--cccCC-CCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc
Confidence 2 25688999999999999996 45 66666 899999999999975 388899999999999999984
Q ss_pred CChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCc
Q 048668 253 IPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNL 332 (725)
Q Consensus 253 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~ 332 (725)
| +..+++|++|++++|.+++.. +..+++|+.|++++|+++ .|++++|.
T Consensus 228 -p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L~--------------------------~L~l~~n~ 275 (457)
T 3bz5_A 228 -D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDLL--------------------------EIDLTHNT 275 (457)
T ss_dssp -C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCCS--------------------------CCCCTTCT
T ss_pred -C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCCC--------------------------EEECCCCc
Confidence 4 788999999999999999754 456788999999988554 58899999
Q ss_pred cCCCcchhhhcCCCCCeEEccCccccccCcc--------ccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCc
Q 048668 333 LNGSLPQQVGNLKNLIILDISSNQFSGMIPV--------TLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNN 404 (725)
Q Consensus 333 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 404 (725)
+.+.+| ++.+++|+.|++++|...+.+|. .+..+++|++|+|++|++++. + ++.+++|+.||+++|+
T Consensus 276 ~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~ 350 (457)
T 3bz5_A 276 QLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAH 350 (457)
T ss_dssp TCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred cCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCC
Confidence 887776 57889999999999987776664 245667899999999999974 3 8889999999999999
Q ss_pred ccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCCC
Q 048668 405 FSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGID 458 (725)
Q Consensus 405 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 458 (725)
+++ ++.|..|++++|.++|.. .+..+..+.++.|. +.|.+|
T Consensus 351 l~~--------l~~L~~L~l~~n~l~g~~----~~~~l~~l~l~~N~-l~g~ip 391 (457)
T 3bz5_A 351 IQD--------FSSVGKIPALNNNFEAEG----QTITMPKETLTNNS-LTIAVS 391 (457)
T ss_dssp CCB--------CTTGGGSSGGGTSEEEEE----EEEECCCBCCBTTB-EEEECC
T ss_pred CCC--------ccccccccccCCcEEecc----eeeecCccccccCc-EEEEcC
Confidence 986 356777889999998872 24456667777773 455543
No 36
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.5e-39 Score=333.77 Aligned_cols=170 Identities=25% Similarity=0.383 Sum_probs=151.0
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeE
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKAL 611 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 611 (725)
+.|+..+.||+|+||+||+|+++.+|+.||||+++.......+.+.+|++++++++|||||++++++...+ ..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEE
Confidence 46888899999999999999999999999999998766556677899999999999999999999977654 8999
Q ss_pred EEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccccc
Q 048668 612 VFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691 (725)
Q Consensus 612 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~ 691 (725)
|||||+||+|.+++... .+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 149 vmEy~~gg~L~~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EECCCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 99999999999999753 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 692 FLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.+.... ....+.+||+.|||||++.
T Consensus 219 ~~~~~~--------~~~~~~~GTp~YmAPEvl~ 243 (346)
T 4fih_A 219 QVSKEV--------PRRKSLVGTPYWMAPELIS 243 (346)
T ss_dssp ECCSSS--------CCBCCCCSCGGGCCHHHHT
T ss_pred ecCCCC--------CcccccccCcCcCCHHHHC
Confidence 764331 1123478999999999864
No 37
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6.2e-38 Score=336.87 Aligned_cols=335 Identities=19% Similarity=0.195 Sum_probs=191.0
Q ss_pred cccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 12 LFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 12 l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
++++++|++++|.++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++++.|..|.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45666666666666643334466666666666666666666666666666666666666666666666666666666666
Q ss_pred ccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 92 LTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 92 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
|++|+++ .+|..+|.++++|++|+|++|+++++.+..|..+++|++|+|++|+++++. +..+++|+.|++++|.++
T Consensus 124 L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 124 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred CCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccccc
Confidence 6666666 666666666666666666666666666666666666666666666666542 344455555555555554
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCC
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHG 251 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 251 (725)
.+ ...++|++|++++|.++. . |.. ..++|+.|++++|.+++
T Consensus 200 ~~-----------~~~~~L~~L~l~~n~l~~-------------------------~-~~~--~~~~L~~L~l~~n~l~~ 240 (390)
T 3o6n_A 200 TL-----------AIPIAVEELDASHNSINV-------------------------V-RGP--VNVELTILKLQHNNLTD 240 (390)
T ss_dssp EE-----------ECCSSCSEEECCSSCCCE-------------------------E-ECC--CCSSCCEEECCSSCCCC
T ss_pred cc-----------CCCCcceEEECCCCeeee-------------------------c-ccc--ccccccEEECCCCCCcc
Confidence 22 122344555555554441 1 110 11344444444444443
Q ss_pred CCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCC
Q 048668 252 TIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNN 331 (725)
Q Consensus 252 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n 331 (725)
. .++..+++|++|++++|.+.+..|
T Consensus 241 ~--~~l~~l~~L~~L~Ls~n~l~~~~~----------------------------------------------------- 265 (390)
T 3o6n_A 241 T--AWLLNYPGLVEVDLSYNELEKIMY----------------------------------------------------- 265 (390)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCEEES-----------------------------------------------------
T ss_pred c--HHHcCCCCccEEECCCCcCCCcCh-----------------------------------------------------
Confidence 2 234444444444444444443333
Q ss_pred ccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcc
Q 048668 332 LLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPK 411 (725)
Q Consensus 332 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 411 (725)
..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++.. |
T Consensus 266 -------~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~- 334 (390)
T 3o6n_A 266 -------HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K- 334 (390)
T ss_dssp -------GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C-
T ss_pred -------hHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C-
Confidence 344445555555555555552 3334445556666666666665 3444555666666666666666643 2
Q ss_pred cccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCC
Q 048668 412 FLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGI 457 (725)
Q Consensus 412 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 457 (725)
+..+++|+.|++++|+|++..... .+..+....+.+++..|..+
T Consensus 335 -~~~~~~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 335 -LSTHHTLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp -CCTTCCCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCSCCCTT
T ss_pred -chhhccCCEEEcCCCCccchhHHH-HHHHHHhhcccccCceeccc
Confidence 556677777777777777655432 24445555566777777654
No 38
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.5e-38 Score=339.91 Aligned_cols=313 Identities=20% Similarity=0.219 Sum_probs=202.9
Q ss_pred CCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEE
Q 048668 36 LSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKEL 115 (725)
Q Consensus 36 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 115 (725)
+++|++|++++|.++.+.+..|..+++|++|+|++|.++++.+..|.++++|++|+|++|+++ .++...|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCEE
Confidence 345555555555555444444455555555555555555555555555555555555555555 4444444555555555
Q ss_pred EccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEEC
Q 048668 116 GIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSL 195 (725)
Q Consensus 116 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L 195 (725)
+|++|+++.+++..|.++++|++|+|++|+++++.+..|.. +++|++|++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~------------------------------l~~L~~L~l 172 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA------------------------------TTSLQNLQL 172 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS------------------------------CTTCCEEEC
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccC------------------------------CCCCCEEEC
Confidence 55555555444444455555555555555555544444444 455555555
Q ss_pred ccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCccccc
Q 048668 196 SDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG 275 (725)
Q Consensus 196 ~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 275 (725)
++|++++. .+..+++|+.|++++|.+.+. ...++|++|++++|.+..
T Consensus 173 ~~n~l~~~----------------------------~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 173 SSNRLTHV----------------------------DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINV 219 (390)
T ss_dssp CSSCCSBC----------------------------CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCE
T ss_pred CCCcCCcc----------------------------ccccccccceeeccccccccc-----CCCCcceEEECCCCeeee
Confidence 55554421 012234455555555544422 223467777777777764
Q ss_pred CCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCc
Q 048668 276 SIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSN 355 (725)
Q Consensus 276 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 355 (725)
. |.. ..++|+.|++++|.++ +. ..+..+++|++|+|++|
T Consensus 220 ~-~~~--~~~~L~~L~l~~n~l~------------------------------------~~--~~l~~l~~L~~L~Ls~n 258 (390)
T 3o6n_A 220 V-RGP--VNVELTILKLQHNNLT------------------------------------DT--AWLLNYPGLVEVDLSYN 258 (390)
T ss_dssp E-ECC--CCSSCCEEECCSSCCC------------------------------------CC--GGGGGCTTCSEEECCSS
T ss_pred c-ccc--ccccccEEECCCCCCc------------------------------------cc--HHHcCCCCccEEECCCC
Confidence 3 222 1356666666666443 21 35777899999999999
Q ss_pred cccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCC
Q 048668 356 QFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPT 435 (725)
Q Consensus 356 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 435 (725)
.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++....
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~- 335 (390)
T 3o6n_A 259 ELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL- 335 (390)
T ss_dssp CCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC-
T ss_pred cCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCc-
Confidence 9999989999999999999999999996 5667788999999999999998 567778889999999999999987643
Q ss_pred CCccCCCCCcCccCCccccCCC
Q 048668 436 KGVFSNKSKIPLQGNVRLCGGI 457 (725)
Q Consensus 436 ~~~~~~~~~~~~~~n~~~c~~~ 457 (725)
..++.++.+++++|++.|...
T Consensus 336 -~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 336 -STHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp -CTTCCCSEEECCSSCEEHHHH
T ss_pred -hhhccCCEEEcCCCCccchhH
Confidence 457899999999999988643
No 39
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3e-39 Score=333.81 Aligned_cols=174 Identities=24% Similarity=0.351 Sum_probs=145.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||+||+|+++.+|+.||||++.... ....+++.+|++++++++|||||++++++...+ .
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-----~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG-----S 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-----E
Confidence 358999999999999999999999999999999997653 334578999999999999999999999976554 8
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+|||||+||+|.+++..... ..+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 170 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFG 170 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTT
T ss_pred EEEEEeCCCCCcHHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccc
Confidence 9999999999999999976542 1578999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+.+... .....+.+||+.|||||++.
T Consensus 171 la~~~~~~--------~~~~~~~~GT~~YmAPE~l~ 198 (350)
T 4b9d_A 171 IARVLNST--------VELARACIGTPYYLSPEICE 198 (350)
T ss_dssp EESCCCHH--------HHHHHHHHSCCTTCCHHHHT
T ss_pred cceeecCC--------cccccccCCCccccCHHHHC
Confidence 99876432 11223468999999999864
No 40
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.9e-38 Score=354.44 Aligned_cols=336 Identities=20% Similarity=0.198 Sum_probs=175.2
Q ss_pred CCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEE
Q 048668 37 SALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELG 116 (725)
Q Consensus 37 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 116 (725)
++++.|++++|.++.+++..|..+++|++|+|++|.|+++.|..|.++++|++|+|++|.|+ .+|...|.++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-CCCHHHHcCCCCCCEEE
Confidence 34444444444444333334444444444444444444444444444444444444444444 33334444444444444
Q ss_pred ccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECc
Q 048668 117 IGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLS 196 (725)
Q Consensus 117 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~ 196 (725)
|++|.|+++++..|.++++|++|+|++|.|+++++..|..+++|++|++++|.++.++ +..+++|+.|+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---------~~~l~~L~~L~l~ 200 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---------LSLIPSLFHANVS 200 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---------GGGCTTCSEEECC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---------hhhhhhhhhhhcc
Confidence 4444444444444444444444444444444444444444444444444444444321 1233455555555
Q ss_pred cCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccC
Q 048668 197 DNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGS 276 (725)
Q Consensus 197 ~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 276 (725)
+|.+++. ....+|+.|++++|.+....+.. .++|++|+|++|.+++
T Consensus 201 ~n~l~~l------------------------------~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~- 246 (597)
T 3oja_B 201 YNLLSTL------------------------------AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD- 246 (597)
T ss_dssp SSCCSEE------------------------------ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC-
T ss_pred cCccccc------------------------------cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC-
Confidence 5544421 01123344444444443222211 1345555555555553
Q ss_pred CCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCcc
Q 048668 277 IPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQ 356 (725)
Q Consensus 277 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 356 (725)
+..+..+++|+.|+|++|.++ +..|..|+.+++|+.|+|++|.
T Consensus 247 -~~~l~~l~~L~~L~Ls~N~l~------------------------------------~~~~~~~~~l~~L~~L~Ls~N~ 289 (597)
T 3oja_B 247 -TAWLLNYPGLVEVDLSYNELE------------------------------------KIMYHPFVKMQRLERLYISNNR 289 (597)
T ss_dssp -CGGGGGCTTCSEEECCSSCCC------------------------------------EEESGGGTTCSSCCEEECTTSC
T ss_pred -ChhhccCCCCCEEECCCCccC------------------------------------CCCHHHhcCccCCCEEECCCCC
Confidence 244555555555555555332 2234455556666666666666
Q ss_pred ccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC
Q 048668 357 FSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK 436 (725)
Q Consensus 357 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 436 (725)
+++ +|..+..+++|+.|+|++|.++ .+|..++.+++|+.|+|++|.+++.. +..+++|+.|++++|+|+|.+...
T Consensus 290 l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~ 364 (597)
T 3oja_B 290 LVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRA 364 (597)
T ss_dssp CCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHH
T ss_pred CCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHH
Confidence 663 3445555667777777777776 45556667777777777777776542 556778888888888888776432
Q ss_pred CccCCCCCcCccCCccccCCCCC
Q 048668 437 GVFSNKSKIPLQGNVRLCGGIDE 459 (725)
Q Consensus 437 ~~~~~~~~~~~~~n~~~c~~~~~ 459 (725)
.+.......+.++...|+....
T Consensus 365 -~~~~~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 365 -LFRNVARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp -HTTTCCTTTBCCCCCCCCTTCE
T ss_pred -HHHHHhhhccccccccCCcchh
Confidence 2445555566778888886543
No 41
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=336.02 Aligned_cols=170 Identities=25% Similarity=0.383 Sum_probs=151.5
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeE
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKAL 611 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 611 (725)
+.|+..+.||+|+||+||+|+++.+|+.||||++........+.+.+|+++|++++|||||++++++...+ ..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC-----EEEE
Confidence 46889999999999999999999999999999998766656677899999999999999999999977654 8999
Q ss_pred EEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccccc
Q 048668 612 VFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAK 691 (725)
Q Consensus 612 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~ 691 (725)
|||||+||+|.++++.. .+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 226 VmEy~~gG~L~~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEECCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 99999999999999753 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 692 FLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.+.... ....+.+||+.|||||++.
T Consensus 296 ~~~~~~--------~~~~~~~GTp~YmAPEvl~ 320 (423)
T 4fie_A 296 QVSKEV--------PRRKSLVGTPYWMAPELIS 320 (423)
T ss_dssp ECCSSC--------CCBCCCEECTTTCCHHHHT
T ss_pred ECCCCC--------ccccccccCcCcCCHHHHC
Confidence 764331 1123478999999999864
No 42
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.2e-38 Score=318.44 Aligned_cols=171 Identities=28% Similarity=0.467 Sum_probs=144.2
Q ss_pred CCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeEE
Q 048668 535 SSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALV 612 (725)
Q Consensus 535 ~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 612 (725)
+..+.||+|+||+||+|+++.++..||+|++.... ....++|.+|++++++++|||||+++++|.... ...+..|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEE
Confidence 55678999999999999999999999999997543 334578999999999999999999999875431 223468999
Q ss_pred EeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC-CCceEEccccccc
Q 048668 613 FEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVGDFGLAK 691 (725)
Q Consensus 613 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~-~~~~kl~Dfgla~ 691 (725)
||||+||+|.+++++.. .+++..+..|+.||+.||+|||++ .++||||||||+|||++. ++.+||+|||+|+
T Consensus 108 mEy~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999998654 589999999999999999999998 223999999999999984 7899999999997
Q ss_pred ccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 692 FLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
..... ...+.+||+.|||||++
T Consensus 181 ~~~~~----------~~~~~~GTp~YmAPE~~ 202 (290)
T 3fpq_A 181 LKRAS----------FAKAVIGTPEFMAPEMY 202 (290)
T ss_dssp GCCTT----------SBEESCSSCCCCCGGGG
T ss_pred eCCCC----------ccCCcccCccccCHHHc
Confidence 53221 12346899999999986
No 43
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-38 Score=315.83 Aligned_cols=170 Identities=31% Similarity=0.465 Sum_probs=136.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|++.+.||+|+||+||+|+++.+++.||||+++... ....+++.+|++++++++|||||++++++...+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----- 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----- 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----
Confidence 468999999999999999999999999999999997542 334567999999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||| +|+|.+++.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred EEEEEEeCC-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 899999999 679999998764 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+...+.. ...+.+||+.|||||++.
T Consensus 157 Gla~~~~~~~---------~~~~~~GT~~Y~APE~~~ 184 (275)
T 3hyh_A 157 GLSNIMTDGN---------FLKTSCGSPNYAAPEVIS 184 (275)
T ss_dssp SCC------------------------CTTSCHHHHS
T ss_pred CCCeecCCCC---------ccCCeeECcccCChhhhc
Confidence 9998754321 112368999999999864
No 44
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2e-38 Score=323.41 Aligned_cols=178 Identities=27% Similarity=0.470 Sum_probs=146.9
Q ss_pred cCCCCCcccccccceEEEEEEEC-----CCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
++|...+.||+|+||+||+|++. .++..||||+++.......++|.+|++++++++|||||+++|+|...+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 46778899999999999999875 357899999998665556788999999999999999999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCC-------ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSND-------QVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD 679 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~ 679 (725)
..|+|||||++|+|.++++.... ......++|.+++.|+.||++||+|||++ +||||||||+|||++.+
T Consensus 89 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 89 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp -SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 78999999999999999986431 11123689999999999999999999999 99999999999999999
Q ss_pred CceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 680 MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 680 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+.+||+|||+|+........ ......+||++|||||++
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~------~~~~~~~gt~~ymAPE~~ 202 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESI 202 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCE------EETTTEEECGGGCCHHHH
T ss_pred CcEEECCcccceecCCCCce------eecCceecChhhcCHHHH
Confidence 99999999999876433211 111235699999999986
No 45
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5e-38 Score=323.22 Aligned_cols=172 Identities=26% Similarity=0.318 Sum_probs=143.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
...|+..+.||+|+||+||+|+++.+|+.||||+++.+.. +.+|++++++++|||||++++++.... ..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-----~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-----WVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC-----EEE
Confidence 3457778899999999999999999999999999975432 247999999999999999999976654 899
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC-ceEEccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFGL 689 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~-~~kl~Dfgl 689 (725)
+|||||+||+|.+++++.. .+++.++..|+.||+.||+|||++ +||||||||+|||++.+| .+||+|||+
T Consensus 127 ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMG------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp EEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred EEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 9999999999999998654 589999999999999999999999 999999999999999987 699999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+.+....... ........+||+.|||||++.
T Consensus 198 a~~~~~~~~~~---~~~~~~~~~GT~~YmAPE~~~ 229 (336)
T 4g3f_A 198 ALCLQPDGLGK---SLLTGDYIPGTETHMAPEVVM 229 (336)
T ss_dssp CEEC---------------CCCCCCGGGCCHHHHT
T ss_pred CeEccCCCccc---ceecCCccccCccccCHHHHC
Confidence 99875432111 111223468999999999874
No 46
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=324.04 Aligned_cols=179 Identities=27% Similarity=0.461 Sum_probs=142.3
Q ss_pred cCCCCCcccccccceEEEEEEEC-----CCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
++|...+.||+|+||+||+|+++ .+++.||||+++.......++|.+|++++++++|||||+++|+|....
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 45677789999999999999875 367899999998666666788999999999999999999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCcc---------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQV---------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 677 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~ 677 (725)
..|+|||||++|+|.++++...... ....++|.++++|+.||+.||+|||++ +||||||||+|||++
T Consensus 117 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 117 -PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp -SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 7899999999999999998654211 123589999999999999999999998 999999999999999
Q ss_pred CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 678 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.++.+||+|||+|+........ ......+||+.|||||++.
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~------~~~~~~~gt~~ymAPE~~~ 233 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESIL 233 (329)
T ss_dssp TTTEEEECCCC----------------------CCCCGGGCCHHHHT
T ss_pred CCCcEEEcccccceeccCCCcc------eecCcccccccccChhhhc
Confidence 9999999999999876433211 1122357999999999864
No 47
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8e-38 Score=319.55 Aligned_cols=188 Identities=24% Similarity=0.422 Sum_probs=141.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc-chHHHHHHHHHHHHcCCCCcccceeeEeecCCC------
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSTDF------ 603 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 603 (725)
.++|+..+.||+|+||+||+|+++.+++.||||+++.... ...+++.+|++++++++|||||++++++...+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 3568999999999999999999999999999999976543 345679999999999999999999999865431
Q ss_pred -CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCce
Q 048668 604 -KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682 (725)
Q Consensus 604 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~ 682 (725)
....+.|+|||||+||+|.+++...... ...++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 1223579999999999999999865432 1356677889999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCCCCCC----CCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSS----KTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+.+......... .......+.+||+.|||||++.
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~ 203 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH 203 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHT
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHc
Confidence 99999999987543222111 1112234568999999999863
No 48
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=318.85 Aligned_cols=171 Identities=32% Similarity=0.512 Sum_probs=140.8
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
..++++..+.||+|+||+||+|+++. .||||+++... ....++|.+|++++++++|||||+++|+|...
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~------ 104 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------ 104 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC------
Confidence 34577788999999999999998753 49999997543 33457899999999999999999999987532
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+|||||+||+|.++++.... .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DF 176 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCC
T ss_pred eEEEEEEcCCCCCHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeec
Confidence 57999999999999999976542 589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+........ ......+||+.|||||++
T Consensus 177 Gla~~~~~~~~~------~~~~~~~GT~~ymAPE~l 206 (307)
T 3omv_A 177 GLATVKSRWSGS------QQVEQPTGSVLWMAPEVI 206 (307)
T ss_dssp SSCBC------------------CCCCTTSCCHHHH
T ss_pred cCceecccCCcc------eeecccccCCCccCHHHh
Confidence 999876432111 112346799999999986
No 49
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.4e-37 Score=316.83 Aligned_cols=178 Identities=23% Similarity=0.357 Sum_probs=145.8
Q ss_pred cCCCCCcccccccceEEEEEEEC-----CCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
++++..+.||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|....
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--- 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ--- 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC---
Confidence 34566789999999999999874 357899999997543 334578999999999999999999999987654
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCc----------cccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCee
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQ----------VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 675 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nil 675 (725)
..++|||||++|+|.+++...... .....+++.++++|+.|||+||+|||++ +||||||||+|||
T Consensus 103 --~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 103 --PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp --SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred --EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 789999999999999999754321 1123589999999999999999999999 9999999999999
Q ss_pred ecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 676 LDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 676 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++.++.+||+|||+|+......... .....+||++|||||++
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~------~~~~~~gt~~ymAPE~l 219 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYK------LLGNSLLPIRWMAPEAI 219 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBC------SSSSSCBCGGGCCHHHH
T ss_pred ECCCCCEEECCcccceeccCCCcee------EecccccCCcccCHHHH
Confidence 9999999999999998765432211 12235799999999986
No 50
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.4e-38 Score=320.60 Aligned_cols=171 Identities=26% Similarity=0.343 Sum_probs=140.4
Q ss_pred cCCCCCcccccccceEEEEEEEC---CCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||++++++...+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 57999999999999999999873 468899999997542 223346889999999999999999999976654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+|||||+||+|.+++.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 100 -~~~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 100 -KLYLILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp -EEEEEECCCTTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred -EEEEEEEcCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 8999999999999999998654 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|+...... ....+.+||+.|||||++.
T Consensus 170 FGla~~~~~~~--------~~~~~~~GT~~YmAPE~~~ 199 (304)
T 3ubd_A 170 FGLSKESIDHE--------KKAYSFCGTVEYMAPEVVN 199 (304)
T ss_dssp SEEEEC-------------CCCCSCCCCGGGCCHHHHH
T ss_pred cccceeccCCC--------ccccccccCcccCCHHHhc
Confidence 99998654321 1122468999999999863
No 51
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-35 Score=314.01 Aligned_cols=308 Identities=24% Similarity=0.362 Sum_probs=196.7
Q ss_pred cccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCC
Q 048668 32 FIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPN 111 (725)
Q Consensus 32 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 111 (725)
.+..+++|++|++++|+++. .+ .|..+++|++|+|++|+++++.+ |.++++|++|++++|+++ .++ .+.++++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~-~~~--~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-DIS--ALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG--GGTTCTT
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCccc-Cch--HHcCCCc
Confidence 34566777777777777763 33 37777777777777777775443 777777777777777776 554 3567777
Q ss_pred ccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCC
Q 048668 112 LKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLK 191 (725)
Q Consensus 112 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~ 191 (725)
|++|+|++|.++.+.+ +..+++|++|++++|......+ .+..+++|++|++++|.+..... +..+++|+
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--------~~~l~~L~ 180 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--------IANLTDLY 180 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--------GGGCTTCS
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--------hccCCCCC
Confidence 7777777777776543 7777778888888875443322 37777778888888877765432 55677888
Q ss_pred EEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCc
Q 048668 192 VLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKN 271 (725)
Q Consensus 192 ~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 271 (725)
+|++++|.+++. + . +..+++|+.|++++|.+.+..+ +..+++|++|++++|
T Consensus 181 ~L~l~~n~l~~~-~-------------------------~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 181 SLSLNYNQIEDI-S-------------------------P-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231 (347)
T ss_dssp EEECTTSCCCCC-G-------------------------G-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred EEEccCCccccc-c-------------------------c-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCC
Confidence 888888877621 1 1 3455667777777777765443 666777777777777
Q ss_pred ccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEE
Q 048668 272 FLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILD 351 (725)
Q Consensus 272 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 351 (725)
.+.+..+ +..+++|++|++++|.+++ + +.+..+++|+.|+
T Consensus 232 ~l~~~~~--~~~l~~L~~L~l~~n~l~~------------~--------------------------~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 232 KITDLSP--LANLSQLTWLEIGTNQISD------------I--------------------------NAVKDLTKLKMLN 271 (347)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCC------------C--------------------------GGGTTCTTCCEEE
T ss_pred ccCCCcc--hhcCCCCCEEECCCCccCC------------C--------------------------hhHhcCCCcCEEE
Confidence 7764433 6677777777777775441 1 1234445555666
Q ss_pred ccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCe
Q 048668 352 ISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLE 430 (725)
Q Consensus 352 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 430 (725)
+++|.+++. +.+..+++|+.|++++|.+++..+..|+.+++|+.|++++|++++..| +..+++|++|++++|+++
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 666655533 235555566666666666655555556666666666666666655444 555666666666666554
No 52
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=9.7e-36 Score=314.59 Aligned_cols=307 Identities=24% Similarity=0.344 Sum_probs=252.6
Q ss_pred ccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCc
Q 048668 9 IGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLE 88 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 88 (725)
+..+++|++|++++|.++ .++ .+..+++|++|++++|++++..+ |..+++|++|+|++|.++.+ ..|.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 446788999999999998 444 48889999999999999986544 88999999999999999853 3699999999
Q ss_pred eeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCc
Q 048668 89 YFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168 (725)
Q Consensus 89 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N 168 (725)
+|++++|+++ .++. +..+++|++|++++|...... ..+..+++|++|++++|.+.++.+ +..+++|++|++++|
T Consensus 114 ~L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 114 ELYLNEDNIS-DISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp EEECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred EEECcCCccc-Cchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 9999999998 6665 678999999999999655443 348899999999999999987765 888999999999999
Q ss_pred cCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccc
Q 048668 169 NLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ 248 (725)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 248 (725)
.+..+.. +..+++|++|++++|.+++. +. +..+++|++|++++|.
T Consensus 188 ~l~~~~~--------~~~l~~L~~L~l~~n~l~~~--------------------------~~-~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 188 QIEDISP--------LASLTSLHYFTAYVNQITDI--------------------------TP-VANMTRLNSLKIGNNK 232 (347)
T ss_dssp CCCCCGG--------GGGCTTCCEEECCSSCCCCC--------------------------GG-GGGCTTCCEEECCSSC
T ss_pred ccccccc--------ccCCCccceeecccCCCCCC--------------------------ch-hhcCCcCCEEEccCCc
Confidence 9875432 66788999999999888732 11 5567889999999999
Q ss_pred cCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecc
Q 048668 249 LHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDL 328 (725)
Q Consensus 249 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L 328 (725)
+++..+ +..+++|++|++++|.+.+. ..+..+++|++|++++|+++
T Consensus 233 l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~------------------------------ 278 (347)
T 4fmz_A 233 ITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQIS------------------------------ 278 (347)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC------------------------------
T ss_pred cCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccC------------------------------
Confidence 987654 88899999999999998853 45778888888888888554
Q ss_pred cCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCccc
Q 048668 329 SNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFS 406 (725)
Q Consensus 329 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 406 (725)
+. +.+..+++|+.|++++|.+++..+..+..+++|++|+|++|.+++..| +..+++|+.|++++|.|+
T Consensus 279 ------~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 279 ------DI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ------CC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ------CC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 11 246678899999999999998888999999999999999999997666 888999999999999886
No 53
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.2e-35 Score=307.41 Aligned_cols=126 Identities=17% Similarity=0.309 Sum_probs=62.3
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
+++.+++++|.++ .+|..+. ++|++|++++|++++..|..|.++++|++|+|++|+++++.|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3555555555554 3444332 355555555555554445555555555555555555554445555555555555555
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQF 146 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i 146 (725)
+|+++ .+|..++ ++|++|++++|+++.+.+..|.++++|++|++++|++
T Consensus 111 ~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 111 KNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp SSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCC
T ss_pred CCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcc
Confidence 55554 4444332 4444444444444444444444444444444444444
No 54
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-35 Score=333.71 Aligned_cols=312 Identities=19% Similarity=0.170 Sum_probs=204.5
Q ss_pred CCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCcccee
Q 048668 60 LRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELL 139 (725)
Q Consensus 60 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 139 (725)
+.+++.|++++|.+..+++..|.++++|++|+|++|.|+ .++...|..+++|++|+|++|.|+++.|..|+++++|++|
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCC-CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 345555555555555444444555555555555555554 4444444455555555555555555544445555555555
Q ss_pred cCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEE
Q 048668 140 DLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFL 219 (725)
Q Consensus 140 ~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~ 219 (725)
+|++|.|+++++..|.. +++|++|+|++|.+++.
T Consensus 129 ~L~~n~l~~l~~~~~~~------------------------------l~~L~~L~Ls~N~l~~~---------------- 162 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHN------------------------------TPKLTTLSMSNNNLERI---------------- 162 (597)
T ss_dssp ECCSSCCCCCCTTTTTT------------------------------CTTCCEEECCSSCCCBC----------------
T ss_pred EeeCCCCCCCCHHHhcc------------------------------CCCCCEEEeeCCcCCCC----------------
Confidence 55555555444444444 44444444444444422
Q ss_pred ecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCC
Q 048668 220 IGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG 299 (725)
Q Consensus 220 l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 299 (725)
.|..|..+++|++|+|++|.+.+.. +..+++|+.|++++|.+.+. ...++|+.|++++|.++
T Consensus 163 ---------~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~- 224 (597)
T 3oja_B 163 ---------EDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSIN- 224 (597)
T ss_dssp ---------CTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCC-
T ss_pred ---------ChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccc-
Confidence 2223344445555555555554432 33345566666666655532 23346677777777665
Q ss_pred ccccccccccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCC
Q 048668 300 NFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSN 379 (725)
Q Consensus 300 ~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 379 (725)
.+|.... ..++.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 225 -----------~~~~~~~---~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 288 (597)
T 3oja_B 225 -----------VVRGPVN---VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 288 (597)
T ss_dssp -----------EEECSCC---SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTS
T ss_pred -----------ccccccC---CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCC
Confidence 2222221 123678888888875 367899999999999999999999999999999999999999
Q ss_pred ccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCC
Q 048668 380 CFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGG 456 (725)
Q Consensus 380 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 456 (725)
.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++.++ ..++.++.+++++|++.|..
T Consensus 289 ~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 289 RLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL--STHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp CCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC--CTTCCCSEEECCSSCEEHHH
T ss_pred CCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh--hhcCCCCEEEeeCCCCCChh
Confidence 9996 5677788999999999999999 577888999999999999999987753 34789999999999998864
No 55
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-36 Score=311.07 Aligned_cols=177 Identities=27% Similarity=0.355 Sum_probs=139.4
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeE
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKAL 611 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 611 (725)
.+|...+.||+|+||+||+|++ +|+.||||+++..... ...+..|+..+.+++|||||+++|+|.... ......|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 3567778999999999999998 5889999999654321 123345666667889999999999987653 22236799
Q ss_pred EEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 612 VFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH-----CQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 612 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-----~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
|||||++|+|.++++.. .+++..+.+++.|++.||+|||++ +.++||||||||+|||++.++++||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EecCCCCCcHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 99999999999999754 488999999999999999999976 246899999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+......... .....+.+||+.|||||++
T Consensus 152 FGla~~~~~~~~~~----~~~~~~~~GT~~ymAPE~l 184 (303)
T 3hmm_A 152 LGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVL 184 (303)
T ss_dssp CTTCEEEETTTTEE----SCC-----CCGGGCCHHHH
T ss_pred CCCCccccCCCCce----eeecccccccccccCHHHh
Confidence 99998765432111 1112246799999999986
No 56
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.2e-34 Score=301.79 Aligned_cols=150 Identities=20% Similarity=0.315 Sum_probs=85.1
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++++.|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4666666666665 4554443 456666666666665555566666666666666666665556666666666666666
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccc--cCccCcccccccCeeecCCccC
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKG--KVSIDFSSLKILWRLNLEQNNL 170 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~~~~f~~l~~L~~L~L~~N~l 170 (725)
+|+++ .+|..++ ++|++|++++|+++++.+..|.++++|++|++++|+++. +.+..|..+++|++|++++|.+
T Consensus 109 ~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 109 KNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp SSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 66665 5555432 455555555555555555555555555555555555542 3333344444444444444433
No 57
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=315.72 Aligned_cols=179 Identities=25% Similarity=0.371 Sum_probs=149.5
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecC-CCCCcce
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSST-DFKGVDF 608 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~~~ 608 (725)
++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+++.+|+++|++++|||||++++++... .+...+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 47999999999999999999999999999999996543 23456788999999999999999999987643 2444567
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+|||||+ |+|.+++.... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecc
Confidence 899999996 68999998654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+.+...... ......+.+||+.|||||+++
T Consensus 204 la~~~~~~~~~----~~~~~~~~~GT~~Y~APEv~~ 235 (398)
T 4b99_A 204 MARGLCTSPAE----HQYFMTEYVATRWYRAPELML 235 (398)
T ss_dssp TCBCC-----------CCCCCSSCCCCTTCCHHHHT
T ss_pred eeeecccCccc----cccccccceeChHhcCHHHhc
Confidence 99876433111 112233478999999999864
No 58
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.6e-36 Score=313.55 Aligned_cols=189 Identities=21% Similarity=0.324 Sum_probs=153.4
Q ss_pred cCHHHHHHHhcCCCCCcccccccceEEEEEEECCC-----ceEEEEEEeeccc-cchHHHHHHHHHHHHcCCC-Ccccce
Q 048668 522 VSYAELSKATSEFSSSNMIGQGSFGSVYKGILGED-----EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRH-RNLIKI 594 (725)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l 594 (725)
++..+++...++|+..+.||+|+||+||+|++..+ ++.||||++.... ....++|.+|++++++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 34456666678899999999999999999997543 4689999997543 3345789999999999975 899999
Q ss_pred eeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCc----------cccccCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 048668 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----------VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPM 664 (725)
Q Consensus 595 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 664 (725)
+|+|.... +..|+|||||++|+|.++|+..... .....+++.++..|+.|||+||+|||++ +|
T Consensus 134 ~g~~~~~~----~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~i 206 (353)
T 4ase_A 134 LGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 206 (353)
T ss_dssp EEEECCTT----SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EEEEEecC----CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Ce
Confidence 99986543 3679999999999999999764321 0122589999999999999999999999 99
Q ss_pred EecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 665 VHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 665 vHrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||||||+|||++.++.+||+|||+|+.+..... .......+||+.|||||++
T Consensus 207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~------~~~~~~~~gt~~ymAPE~l 259 (353)
T 4ase_A 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETI 259 (353)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHH
T ss_pred ecCccCccceeeCCCCCEEECcchhhhhcccCCC------ceeeccccccccccCHHHH
Confidence 9999999999999999999999999987643211 1122346799999999986
No 59
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.1e-34 Score=301.13 Aligned_cols=258 Identities=29% Similarity=0.481 Sum_probs=234.6
Q ss_pred CCCCEEECccCcccc--cCChhhhhccccceeEEecC-ccceeccCcccccccCCceEEecccccCCCCChhhcCCCCcc
Q 048668 188 SSLKVLSLSDNQFGG--ELPHSIANLSSTMIVFLIGG-NQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQ 264 (725)
Q Consensus 188 ~~L~~L~L~~N~l~~--~~p~~~~~l~~~l~~L~l~~-n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 264 (725)
.+++.|+|++|.+++ .+|..+.+++ .|+.|++++ |.+.+.+|..+.++++|++|+|++|++.+.+|..|..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 578888888888888 7888888887 888999985 888888999999999999999999999988999999999999
Q ss_pred EEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcC
Q 048668 265 LLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNL 344 (725)
Q Consensus 265 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l 344 (725)
+|+|++|.+.+.+|..|..+++|++|++++|+++ +.+|..+......+++|++++|.+++..|..+..+
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----------~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l 197 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS-----------GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL 197 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCE-----------EECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCccc-----------CcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC
Confidence 9999999999889999999999999999999554 47788888877455899999999998999999999
Q ss_pred CCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEc
Q 048668 345 KNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNL 424 (725)
Q Consensus 345 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 424 (725)
+ |+.|++++|.+++..|..|..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|++++.+|..+..+++|++|+|
T Consensus 198 ~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 275 (313)
T 1ogq_A 198 N-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275 (313)
T ss_dssp C-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEEC
T ss_pred c-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEEC
Confidence 7 99999999999999999999999999999999999977665 888999999999999999999999999999999999
Q ss_pred ccccCeeecCCCCccCCCCCcCccCCccccCCCCC
Q 048668 425 SYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGIDE 459 (725)
Q Consensus 425 ~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~ 459 (725)
++|++++.+|....++.++.+.+.+|+++|+.+..
T Consensus 276 s~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 276 SFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp CSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred cCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 99999999999888899999999999999997643
No 60
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3e-33 Score=293.36 Aligned_cols=288 Identities=22% Similarity=0.222 Sum_probs=161.2
Q ss_pred CCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeec
Q 048668 86 SLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNL 165 (725)
Q Consensus 86 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L 165 (725)
+|+.+++++|.++ .+|..+ .++|+.|+|++|.++++.+..|.++++|++|+|++|+|+++.+..|..+++|++|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4555555555554 455433 245555555555555555555555555555555555555555555555555555555
Q ss_pred CCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccce--eccCcccccccCCceEE
Q 048668 166 EQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQIS--GTIPLGIRNLVNLIALA 243 (725)
Q Consensus 166 ~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~--~~~~~~~~~l~~L~~L~ 243 (725)
++|.++.++.. +. ++|++|++++|++++..+..+..++ +|+.|++++|.+. +..+..+..+ +|+.|+
T Consensus 110 ~~n~l~~l~~~-------~~--~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 110 SKNHLVEIPPN-------LP--SSLVELRIHDNRIRKVPKGVFSGLR-NMNCIEMGGNPLENSGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp CSSCCCSCCSS-------CC--TTCCEEECCSSCCCCCCSGGGSSCS-SCCEEECCSCCCBGGGSCTTSSCSC-CCSCCB
T ss_pred CCCcCCccCcc-------cc--ccCCEEECCCCccCccCHhHhCCCc-cCCEEECCCCccccCCCCcccccCC-ccCEEE
Confidence 55555433321 11 4555555555555422222222222 2222222222221 1223333333 455555
Q ss_pred ecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCcccccccccccccccccccccccc
Q 048668 244 VEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLS 323 (725)
Q Consensus 244 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll 323 (725)
+++|++++++.. +. ++|++|++++|.+.+..+..|..+++|
T Consensus 179 l~~n~l~~l~~~-~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L------------------------------------ 219 (332)
T 2ft3_A 179 ISEAKLTGIPKD-LP--ETLNELHLDHNKIQAIELEDLLRYSKL------------------------------------ 219 (332)
T ss_dssp CCSSBCSSCCSS-SC--SSCSCCBCCSSCCCCCCTTSSTTCTTC------------------------------------
T ss_pred CcCCCCCccCcc-cc--CCCCEEECCCCcCCccCHHHhcCCCCC------------------------------------
Confidence 555555432221 11 344445555554444444444444444
Q ss_pred ceecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCC------CCCCE
Q 048668 324 LYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFL------KSIKF 397 (725)
Q Consensus 324 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~ 397 (725)
++|++++|.+++..+..|..+++|+.|+|++|+++ .+|..+..+++|++|++++|++++..+..|..+ .+|+.
T Consensus 220 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~ 298 (332)
T 2ft3_A 220 YRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNG 298 (332)
T ss_dssp SCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSE
T ss_pred CEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccc
Confidence 44555555555556667788888888888888888 677778888888889998888887777777653 66889
Q ss_pred EeCCCCccc--ccCcccccCCCCCCeEEccccc
Q 048668 398 LDVSCNNFS--GQFPKFLENLSFLEFLNLSYNH 428 (725)
Q Consensus 398 L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~N~ 428 (725)
|++++|.+. +..|.+|..++.|+.+++++|+
T Consensus 299 L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 299 ISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp EECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred eEeecCcccccccCcccccccchhhhhhccccc
Confidence 999999887 6778888899999999998874
No 61
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.4e-34 Score=319.31 Aligned_cols=170 Identities=25% Similarity=0.336 Sum_probs=145.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHH---HHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSF---VAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
.++|++.++||+|+||+||+|+++.+|+.||||++.+.. ......+ ..++++++.++|||||++++++...+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 457999999999999999999999999999999997532 2222333 34466777889999999999966544
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEE
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl 684 (725)
..|+|||||+||+|.+++.+.. .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||
T Consensus 266 ---~lylVmEy~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 266 ---KLSFILDLMNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ---EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 8999999999999999998754 589999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+.+.... ..+.+||+.|||||++.
T Consensus 334 ~DFGlA~~~~~~~----------~~t~~GTp~YmAPEvl~ 363 (689)
T 3v5w_A 334 SDLGLACDFSKKK----------PHASVGTHGYMAPEVLQ 363 (689)
T ss_dssp CCCTTCEECSSCC----------CCSCCSCGGGCCHHHHS
T ss_pred cccceeeecCCCC----------CCCccCCcCccCHHHHh
Confidence 9999998764321 12368999999999874
No 62
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.2e-37 Score=339.34 Aligned_cols=384 Identities=17% Similarity=0.136 Sum_probs=193.1
Q ss_pred ccCcEEecCCCccCccCCc-cccCCCCCcEEEccCCcCCc----cCCCCCCCCCCCCEEEccCCcccccCcccc-cccC-
Q 048668 13 FKLQALALAGNYLTGKLPD-FIGNLSALQVIHIKGNSLGG----KFPTTLGLLRNLVQLNVAENKFYGMFPRSI-CNIS- 85 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~- 85 (725)
++|++|+|++|+++..... .+..+++|++|+|++|++++ .++..|..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3566777777776643322 26666677777777776653 234555566666666666666654433332 2343
Q ss_pred ---CCceeeccCCCCCCCCC----hhhhcCCCCccEEEccCceeeeeCCCcc-----cccCccceecCCCccccccCccC
Q 048668 86 ---SLEYFYLTSNRFSGSLP----FDIVVNLPNLKELGIGANNFFGLIPDSL-----SNASNLELLDLSNNQFKGKVSID 153 (725)
Q Consensus 86 ---~L~~L~L~~N~l~~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~Ls~N~i~~~~~~~ 153 (725)
+|++|+|++|+|+ ... ...+..+++|++|+|++|.++...+..+ ...++|++|+|++|++++.....
T Consensus 83 ~~~~L~~L~L~~n~i~-~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLT-GAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp TTCCCCEEECTTSCCB-GGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred CCCceeEEEccCCCCC-HHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 4666666666665 211 2234455566666666665543322222 12334555555555555432111
Q ss_pred cccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhc----cccceeEEecCccceec-
Q 048668 154 FSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANL----SSTMIVFLIGGNQISGT- 228 (725)
Q Consensus 154 f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l----~~~l~~L~l~~n~i~~~- 228 (725)
+ +..+..+++|++|++++|.+++..+..+... ...++.|++++|.+++.
T Consensus 162 l--------------------------~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 162 L--------------------------ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp H--------------------------HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred H--------------------------HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 1 1223334445555555554443322222211 11334444444443321
Q ss_pred ---cCcccccccCCceEEecccccCCCC-----ChhhcCCCCccEEeccCcccccC----CCCCCcCCCCCCEEeCCCCc
Q 048668 229 ---IPLGIRNLVNLIALAVEVNQLHGTI-----PDVIGELKNLQLLGLYKNFLQGS----IPSGLGNLTKLAKLDLGSNS 296 (725)
Q Consensus 229 ---~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~ 296 (725)
++..+..+++|++|++++|.+.+.. +..+..+++|++|++++|.+++. ++..+..+++|++|++++|.
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 3444555566666666666665322 22233456667777777666542 34445556667777776665
Q ss_pred CCCccccccccccccccccccccccccceecccCCccCCC----cchhhhcCCCCCeEEccCccccccCcccccc-----
Q 048668 297 LQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGS----LPQQVGNLKNLIILDISSNQFSGMIPVTLST----- 367 (725)
Q Consensus 297 l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----- 367 (725)
+++... ..+...+......+++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+..
T Consensus 296 i~~~~~-------~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 368 (461)
T 1z7x_W 296 LGDEGA-------RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQP 368 (461)
T ss_dssp CHHHHH-------HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred CchHHH-------HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCC
Confidence 441100 011111111112235566666665543 3445555666667777666666544444432
Q ss_pred ccCCcEEEccCCcccc----ccCccccCCCCCCEEeCCCCcccccCccccc-----CCCCCCeEEcccccCe
Q 048668 368 CVSLEYVDISSNCFHG----IIPPSLGFLKSIKFLDVSCNNFSGQFPKFLE-----NLSFLEFLNLSYNHLE 430 (725)
Q Consensus 368 l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~ 430 (725)
.++|++|+|++|.+++ .+|..+..+++|+.|||++|++++.....+. ....|+.|++.++.+.
T Consensus 369 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 369 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred CCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 4566666666666664 4555566666666666666666543111111 1234555555555544
No 63
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.3e-32 Score=288.32 Aligned_cols=275 Identities=17% Similarity=0.215 Sum_probs=209.2
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
.+|..+.. ++++|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+++. +|..+.
T Consensus 45 ~lp~~~~~--~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~- 120 (330)
T 1xku_A 45 KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP- 120 (330)
T ss_dssp SCCCSCCT--TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC-
T ss_pred ccCccCCC--CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc-
Confidence 57777764 89999999999997777799999999999999999998889999999999999999999985 444443
Q ss_pred cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeee--eCCCcccccCccceecCCCccccccCccCcccccccC
Q 048668 84 ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFG--LIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILW 161 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~ 161 (725)
++|++|++++|+++ .++...|.++++|++|++++|.++. ..+..|.++++|++|++++|+++.++...+ ++|+
T Consensus 121 -~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~---~~L~ 195 (330)
T 1xku_A 121 -KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLT 195 (330)
T ss_dssp -TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC---TTCS
T ss_pred -ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc---ccCC
Confidence 79999999999998 8888889999999999999999964 778899999999999999999998776544 7788
Q ss_pred eeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCce
Q 048668 162 RLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIA 241 (725)
Q Consensus 162 ~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~ 241 (725)
+|++++|.++...+ ..+.++++|++|++++|++++..+..+..++ .|+.|++++|.++ .+|..+..+++|++
T Consensus 196 ~L~l~~n~l~~~~~------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~L~~ 267 (330)
T 1xku_A 196 ELHLDGNKITKVDA------ASLKGLNNLAKLGLSFNSISAVDNGSLANTP-HLRELHLNNNKLV-KVPGGLADHKYIQV 267 (330)
T ss_dssp EEECTTSCCCEECT------GGGTTCTTCCEEECCSSCCCEECTTTGGGST-TCCEEECCSSCCS-SCCTTTTTCSSCCE
T ss_pred EEECCCCcCCccCH------HHhcCCCCCCEEECCCCcCceeChhhccCCC-CCCEEECCCCcCc-cCChhhccCCCcCE
Confidence 88999988876544 4567788888888888888865555555555 5666666666665 45555555666666
Q ss_pred EEecccccCCCCChhhcCC------CCccEEeccCccccc--CCCCCCcCCCCCCEEeCCCC
Q 048668 242 LAVEVNQLHGTIPDVIGEL------KNLQLLGLYKNFLQG--SIPSGLGNLTKLAKLDLGSN 295 (725)
Q Consensus 242 L~L~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N 295 (725)
|++++|+++++.+..|... +.|+.|++++|.+.. ..|..|..+.+++.+++++|
T Consensus 268 L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 268 VYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp EECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred EECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 6666666665555555432 345555555555432 33444555555555555554
No 64
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.6e-34 Score=298.67 Aligned_cols=176 Identities=24% Similarity=0.326 Sum_probs=142.7
Q ss_pred HhcCCCCCcccccccceEEEEEEEC---CCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 605 (725)
..+.|++.+.||+|+||+||+|+++ .+++.||||++.... ...++.+|+++++.+ +|||||++++++...+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--- 93 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--- 93 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT---
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC---
Confidence 4567999999999999999999874 468899999986443 345788999999998 5999999999976554
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC-CceEE
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD-MVAHV 684 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~-~~~kl 684 (725)
+.|+|||||+||+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 94 --~~~lvmE~~~g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN---------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred --EEEEEEeCCCcccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 8999999999999999984 478999999999999999999999 99999999999999877 79999
Q ss_pred cccccccccccCCCCCC--------------------CCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTS--------------------SKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+...+...... ........+.+||++|||||++.
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 219 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLT 219 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHT
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHc
Confidence 99999986543211000 00011223468999999999874
No 65
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.9e-33 Score=291.77 Aligned_cols=249 Identities=29% Similarity=0.439 Sum_probs=168.7
Q ss_pred ccCcEEecCCCccCc--cCCccccCCCCCcEEEccC-CcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCce
Q 048668 13 FKLQALALAGNYLTG--KLPDFIGNLSALQVIHIKG-NSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEY 89 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 89 (725)
.++++|+|++|.+++ .+|..|..+++|++|+|++ |++.+..|..|+.+++|++|+|++|++++..|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356777777777776 6677777777777777774 6776666777777777777777777776666777777777777
Q ss_pred eeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccC-ccceecCCCccccccCccCcccccccCeeecCCc
Q 048668 90 FYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNAS-NLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168 (725)
Q Consensus 90 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N 168 (725)
|+|++|++++.+|.. +..+++|++|+|++|++++..|..+..++ +|++|+|++|++++..+..|..++ |++|++++|
T Consensus 130 L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPS-ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGG-GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChH-HhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 777777776555543 45667777777777777666666666666 677777777777666666666555 666666666
Q ss_pred cCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccc
Q 048668 169 NLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ 248 (725)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 248 (725)
.++...+ ..+.++++|++|+|++|++++ .+|. +..+++|++|+|++|+
T Consensus 208 ~l~~~~~------~~~~~l~~L~~L~L~~N~l~~-------------------------~~~~-~~~l~~L~~L~Ls~N~ 255 (313)
T 1ogq_A 208 MLEGDAS------VLFGSDKNTQKIHLAKNSLAF-------------------------DLGK-VGLSKNLNGLDLRNNR 255 (313)
T ss_dssp EEEECCG------GGCCTTSCCSEEECCSSEECC-------------------------BGGG-CCCCTTCCEEECCSSC
T ss_pred cccCcCC------HHHhcCCCCCEEECCCCceee-------------------------ecCc-ccccCCCCEEECcCCc
Confidence 5543322 334455555555555555542 3332 4556778888888888
Q ss_pred cCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCc
Q 048668 249 LHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNS 296 (725)
Q Consensus 249 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 296 (725)
+.+.+|.+|..+++|++|+|++|++++.+|.. ..+++|+.+++++|+
T Consensus 256 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 256 IYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 87777788888888888888888888777765 677778777787774
No 66
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.7e-33 Score=312.11 Aligned_cols=172 Identities=21% Similarity=0.324 Sum_probs=150.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|++.+.||+|+||+||+|+++.+|+.||+|++........+.+.+|+++|++++|||||++++++.... ..|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-----EMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS-----EEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEE
Confidence 467999999999999999999999999999999998765556678899999999999999999999976554 899
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC--CceEEcccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD--MVAHVGDFG 688 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~--~~~kl~Dfg 688 (725)
+|||||+||+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 231 iv~E~~~gg~L~~~i~~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTS-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEeecCCCcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 99999999999999975432 589999999999999999999999 99999999999999854 899999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+.+... ......+||+.|||||++.
T Consensus 303 ~a~~~~~~---------~~~~~~~GT~~y~APEv~~ 329 (573)
T 3uto_A 303 LTAHLDPK---------QSVKVTTGTAEFAAPEVAE 329 (573)
T ss_dssp SCEECCTT---------SEEEEECSSGGGCCHHHHT
T ss_pred ceeEccCC---------CceeeeEECccccCHHHhC
Confidence 99876432 1123468999999999864
No 67
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=7.2e-36 Score=328.52 Aligned_cols=374 Identities=18% Similarity=0.128 Sum_probs=258.7
Q ss_pred ccCcccCcEEecCCCccCc----cCCccccCCCCCcEEEccCCcCCccCCCCC-CCCC----CCCEEEccCCcccc----
Q 048668 9 IGSLFKLQALALAGNYLTG----KLPDFIGNLSALQVIHIKGNSLGGKFPTTL-GLLR----NLVQLNVAENKFYG---- 75 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~----~L~~L~Ls~N~l~~---- 75 (725)
+..+++|++|+|++|.++. .++..+..+++|++|+|++|++++..+..+ ..++ +|++|+|++|+|+.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 6678899999999999984 356788899999999999999976444333 3344 79999999999984
Q ss_pred cCcccccccCCCceeeccCCCCCCCCChh----hhcCCCCccEEEccCceeeeeC----CCcccccCccceecCCCcccc
Q 048668 76 MFPRSICNISSLEYFYLTSNRFSGSLPFD----IVVNLPNLKELGIGANNFFGLI----PDSLSNASNLELLDLSNNQFK 147 (725)
Q Consensus 76 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~----~~~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~Ls~N~i~ 147 (725)
.++..+..+++|++|+|++|.+++..+.. .+...++|++|+|++|+++... +..+..+++|++|+|++|+++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 45889999999999999999997332322 2334678999999999998643 556777899999999999998
Q ss_pred ccCccCccc-----ccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecC
Q 048668 148 GKVSIDFSS-----LKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGG 222 (725)
Q Consensus 148 ~~~~~~f~~-----l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~ 222 (725)
+.....+.. .++|++|++++|.++..... .++..+..+++|++|++++|.+++.....+..
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~------------ 249 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR--DLCGIVASKASLRELALGSNKLGDVGMAELCP------------ 249 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH--HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH------------
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH--HHHHHHHhCCCccEEeccCCcCChHHHHHHHH------------
Confidence 765544433 45899999999988753211 12345667788899999988887432222211
Q ss_pred ccceeccCcccccccCCceEEecccccCCC----CChhhcCCCCccEEeccCcccccCCCCCCc-----CCCCCCEEeCC
Q 048668 223 NQISGTIPLGIRNLVNLIALAVEVNQLHGT----IPDVIGELKNLQLLGLYKNFLQGSIPSGLG-----NLTKLAKLDLG 293 (725)
Q Consensus 223 n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~ 293 (725)
..+..+++|++|++++|+++.. ++..+..+++|++|++++|.+.+..+..+. ..++|++|+++
T Consensus 250 --------~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 250 --------GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp --------HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred --------HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 1122355666777777766643 345556667777777777766543332222 22577777777
Q ss_pred CCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhc-----CCCCCeEEccCccccc----cCccc
Q 048668 294 SNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGN-----LKNLIILDISSNQFSG----MIPVT 364 (725)
Q Consensus 294 ~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~~~~ 364 (725)
+|.+++.. ...++..+.....+ ++|++++|.+++..+..+.. .++|+.|+|++|.+++ .+|..
T Consensus 322 ~n~l~~~~-------~~~l~~~l~~~~~L-~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 393 (461)
T 1z7x_W 322 SCSFTAAC-------CSHFSSVLAQNRFL-LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAAT 393 (461)
T ss_dssp TSCCBGGG-------HHHHHHHHHHCSSC-CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred CCCCchHH-------HHHHHHHHhhCCCc-cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHH
Confidence 77655210 11233333344444 67777777776554544443 6789999999999986 67888
Q ss_pred cccccCCcEEEccCCccccccCcccc-----CCCCCCEEeCCCCcccccCccc
Q 048668 365 LSTCVSLEYVDISSNCFHGIIPPSLG-----FLKSIKFLDVSCNNFSGQFPKF 412 (725)
Q Consensus 365 ~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~p~~ 412 (725)
+..+++|++|+|++|.+++.....+. ....|+.|++.++.+....+..
T Consensus 394 l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~ 446 (461)
T 1z7x_W 394 LLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDR 446 (461)
T ss_dssp HHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHH
T ss_pred HHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHH
Confidence 88889999999999998864222222 2346788888877776544443
No 68
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=280.11 Aligned_cols=283 Identities=18% Similarity=0.159 Sum_probs=233.3
Q ss_pred CccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccC
Q 048668 6 PKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNIS 85 (725)
Q Consensus 6 p~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 85 (725)
++.-..++.....++++|.++ .+|..+. ++|++|++++|+++++.+..|.++++|++|+|++|+++++.|.+|.+++
T Consensus 24 ~~~~~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (353)
T 2z80_A 24 NQASLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLG 100 (353)
T ss_dssp ---CCEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CccCCCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCC
Confidence 334455667777899999998 6777665 5899999999999988888899999999999999999988888999999
Q ss_pred CCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCC-CcccccCccceecCCCc-cccccCccCcccccccCee
Q 048668 86 SLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIP-DSLSNASNLELLDLSNN-QFKGKVSIDFSSLKILWRL 163 (725)
Q Consensus 86 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N-~i~~~~~~~f~~l~~L~~L 163 (725)
+|++|+|++|+|+ .+|...|.++++|++|+|++|+++.+.+ ..|..+++|++|++++| .++.+.+..|..+++|++|
T Consensus 101 ~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 101 SLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 9999999999998 8888888899999999999999997765 57899999999999999 5888888889999999999
Q ss_pred ecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccc---cccCCc
Q 048668 164 NLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIR---NLVNLI 240 (725)
Q Consensus 164 ~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~---~l~~L~ 240 (725)
++++|.++...+ ..+.++++|++|++++|+++ .+|..+......++.|++++|.+++..+..+. ....++
T Consensus 180 ~l~~n~l~~~~~------~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~ 252 (353)
T 2z80_A 180 EIDASDLQSYEP------KSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252 (353)
T ss_dssp EEEETTCCEECT------TTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCC
T ss_pred ECCCCCcCccCH------HHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhh
Confidence 999999886644 45778899999999999987 55555554444899999999999876555443 356788
Q ss_pred eEEecccccCC----CCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCC
Q 048668 241 ALAVEVNQLHG----TIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQG 299 (725)
Q Consensus 241 ~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 299 (725)
.++|+++.+.+ .+|.++..+++|++|++++|+++...+..|..+++|++|++++|++++
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 88888888875 357788999999999999999995444446899999999999997763
No 69
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=9.7e-32 Score=284.37 Aligned_cols=267 Identities=19% Similarity=0.235 Sum_probs=233.7
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
.+||+.+.. +|++|++++|++++..+..|..+++|++|++++|++++..|.+|.++++|++|+|++|+++++.+..|.
T Consensus 44 ~~iP~~~~~--~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 121 (353)
T 2z80_A 44 NSIPSGLTE--AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFK 121 (353)
T ss_dssp SSCCTTCCT--TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHT
T ss_pred ccccccccc--cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhC
Confidence 368887775 899999999999976667999999999999999999999999999999999999999999977777799
Q ss_pred ccCCCceeeccCCCCCCCCCh-hhhcCCCCccEEEccCc-eeeeeCCCcccccCccceecCCCccccccCccCccccccc
Q 048668 83 NISSLEYFYLTSNRFSGSLPF-DIVVNLPNLKELGIGAN-NFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKIL 160 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L 160 (725)
++++|++|+|++|+++ .+|. ..|.++++|++|++++| .++.+.+..|.++++|++|++++|+++++.+..|..+++|
T Consensus 122 ~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 200 (353)
T 2z80_A 122 PLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNV 200 (353)
T ss_dssp TCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred CCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccC
Confidence 9999999999999998 8887 77889999999999999 5888888999999999999999999999999999999999
Q ss_pred CeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhh--ccccceeEEecCcccee----ccCcccc
Q 048668 161 WRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIAN--LSSTMIVFLIGGNQISG----TIPLGIR 234 (725)
Q Consensus 161 ~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~~l~~L~l~~n~i~~----~~~~~~~ 234 (725)
++|++++|.++.++. ..+..+++|++|++++|++++..+..+.. ....++.+.+.++.+.+ .+|..+.
T Consensus 201 ~~L~l~~n~l~~~~~------~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~ 274 (353)
T 2z80_A 201 SHLILHMKQHILLLE------IFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLN 274 (353)
T ss_dssp EEEEEECSCSTTHHH------HHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHH
T ss_pred CeecCCCCccccchh------hhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHh
Confidence 999999999975543 33456899999999999999765554432 23367788888888876 4678889
Q ss_pred cccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCC
Q 048668 235 NLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIP 278 (725)
Q Consensus 235 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 278 (725)
.+++|++|++++|+++.+++..|..+++|++|++++|.+.+..|
T Consensus 275 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 275 QISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99999999999999997766678999999999999999986443
No 70
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.7e-30 Score=281.64 Aligned_cols=248 Identities=22% Similarity=0.197 Sum_probs=209.9
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
+...++.+++.++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4678899999988 6777665 689999999999998889999999999999999999998888999999999999999
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCC-ccccccCccCcccccccCeeecCCccCCc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSN-NQFKGKVSIDFSSLKILWRLNLEQNNLGI 172 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~f~~l~~L~~L~L~~N~l~~ 172 (725)
+|+|+ .+|...|.++++|++|+|++|+|+.+.+..|.++++|++|+|++ |.+..+++..|..+++|++|+|++|.++.
T Consensus 132 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 132 DNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99998 88888888999999999999999988888899999999999998 67777888888888899999999998876
Q ss_pred cCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCC
Q 048668 173 GAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT 252 (725)
Q Consensus 173 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 252 (725)
++. +..+++|++|+|++|++++. .|..|.++++|+.|+|++|++.++
T Consensus 211 ~~~--------~~~l~~L~~L~Ls~N~l~~~-------------------------~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 211 MPN--------LTPLVGLEELEMSGNHFPEI-------------------------RPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp CCC--------CTTCTTCCEEECTTSCCSEE-------------------------CGGGGTTCTTCCEEECTTSCCCEE
T ss_pred ccc--------ccccccccEEECcCCcCccc-------------------------CcccccCccCCCEEEeCCCcCceE
Confidence 532 56777888888888877743 345566677888888888888888
Q ss_pred CChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCC
Q 048668 253 IPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQ 298 (725)
Q Consensus 253 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 298 (725)
.+.+|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 8888888888888888888888777777888888888888888655
No 71
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=280.15 Aligned_cols=248 Identities=22% Similarity=0.245 Sum_probs=207.0
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
..+.++.+++.++ .+|..+. ++++.|+|++|+++++.+..|.++++|++|+|++|+|+.+.+.+|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3678888888888 6777665 688999999999988888889999999999999999988888889999999999999
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCC-ccccccCccCcccccccCeeecCCccCCc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSN-NQFKGKVSIDFSSLKILWRLNLEQNNLGI 172 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~f~~l~~L~~L~L~~N~l~~ 172 (725)
+|+|+ .+|...|.++++|++|+|++|+|+.+.+..|..+++|++|+|++ |.+..+.+..|..+++|++|+|++|.++.
T Consensus 121 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 121 DNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp SSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 99998 88888888899999999999999988888889999999999988 56777777788888888888888888875
Q ss_pred cCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCC
Q 048668 173 GAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT 252 (725)
Q Consensus 173 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 252 (725)
++. +..+++|++|+|++|++++ ..|..|.++++|+.|+|++|++.++
T Consensus 200 ~~~--------~~~l~~L~~L~Ls~N~l~~-------------------------~~~~~~~~l~~L~~L~L~~n~l~~~ 246 (440)
T 3zyj_A 200 IPN--------LTPLIKLDELDLSGNHLSA-------------------------IRPGSFQGLMHLQKLWMIQSQIQVI 246 (440)
T ss_dssp CCC--------CTTCSSCCEEECTTSCCCE-------------------------ECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred ccc--------cCCCcccCEEECCCCccCc-------------------------cChhhhccCccCCEEECCCCceeEE
Confidence 532 5667778888877777764 3455666777888888888888888
Q ss_pred CChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCC
Q 048668 253 IPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQ 298 (725)
Q Consensus 253 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 298 (725)
.+.+|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 247 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 247 ERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 8888888888888888888888777777888888888888888654
No 72
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.97 E-value=6.5e-31 Score=274.07 Aligned_cols=171 Identities=25% Similarity=0.410 Sum_probs=149.7
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
..++|+..+.||+|+||.||+|++..+|+.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK----- 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----
Confidence 3568999999999999999999999999999999997543 334567889999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DF 158 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADF 158 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECST
T ss_pred EEEEEEECCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeec
Confidence 7899999999999999997654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+...... .....+||+.|+|||++
T Consensus 159 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~ 185 (328)
T 3fe3_A 159 GFSNEFTVGG---------KLDAFCGAPPYAAPELF 185 (328)
T ss_dssp TCCGGGSSSC---------GGGTTSSSGGGCCHHHH
T ss_pred cCceecCCCC---------ccccccCCcceeCcccc
Confidence 9998654321 12236799999999986
No 73
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=1.3e-30 Score=268.40 Aligned_cols=170 Identities=25% Similarity=0.393 Sum_probs=150.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++..+++.||||++........+.+.+|+.++++++||||+++++++...+ ..|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC-----EEE
Confidence 457999999999999999999999999999999998766666678999999999999999999999987655 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 94 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEECCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999999999999754 478999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+....... .....+||+.|+|||++
T Consensus 164 ~~~~~~~~--------~~~~~~gt~~y~aPE~~ 188 (297)
T 3fxz_A 164 AQITPEQS--------KRSTMVGTPYWMAPEVV 188 (297)
T ss_dssp EECCSTTC--------CBCCCCSCGGGCCHHHH
T ss_pred eecCCccc--------ccCCccCCcCccChhhh
Confidence 87643321 11235799999999975
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=9.7e-31 Score=273.50 Aligned_cols=172 Identities=27% Similarity=0.355 Sum_probs=149.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||+||+|+++.+++.||+|+++.. .....+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----- 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC-----
Confidence 46789999999999999999999999999999999754 2345577899999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 8899999999999999997654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+...... ......+||+.|||||++.
T Consensus 150 G~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~ 178 (337)
T 1o6l_A 150 GLCKEGISDG--------ATMKTFCGTPEYLAPEVLE 178 (337)
T ss_dssp TTCBCSCCTT--------CCBCCCEECGGGCCGGGGS
T ss_pred cchhhcccCC--------CcccccccChhhCChhhhc
Confidence 9998643221 1122367999999999863
No 75
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.8e-30 Score=265.72 Aligned_cols=249 Identities=22% Similarity=0.223 Sum_probs=196.5
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccccc--CcccccccCCCceeec
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGM--FPRSICNISSLEYFYL 92 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L 92 (725)
.+.++++++.++ .+|..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|+++.. .+..+..+++|++|+|
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 468889999888 6776554 6889999999999876677788899999999999988743 3667778888999999
Q ss_pred cCCCCCCCCChhhhcCCCCccEEEccCceeeeeCC-CcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 93 TSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIP-DSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 93 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
++|.++ .+|.. +.++++|++|++++|+++++.+ ..|..+++|++|++++|+++++.+..|..+++|++|++++|.++
T Consensus 86 s~n~i~-~l~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 86 SFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CSCSEE-EEEEE-EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCccc-cChhh-cCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 999887 67755 5678888888888888887765 57888888888888888888777777777777777777777765
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCC
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHG 251 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 251 (725)
... .+..+.++++|++|++++|++++ ..|..+..+++|++|+|++|++.+
T Consensus 164 ~~~-----~~~~~~~l~~L~~L~Ls~n~l~~-------------------------~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 164 ENF-----LPDIFTELRNLTFLDLSQCQLEQ-------------------------LSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp GGE-----ECSCCTTCTTCCEEECTTSCCCE-------------------------ECTTTTTTCTTCCEEECTTSCCSB
T ss_pred ccc-----chhHHhhCcCCCEEECCCCCcCC-------------------------cCHHHhcCCCCCCEEECCCCccCc
Confidence 310 11345566677777776666653 445567777889999999999988
Q ss_pred CCChhhcCCCCccEEeccCcccccCCCCCCcCCC-CCCEEeCCCCcCC
Q 048668 252 TIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLT-KLAKLDLGSNSLQ 298 (725)
Q Consensus 252 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 298 (725)
..+..+..+++|++|++++|.+.+..|..+..++ +|++|++++|+++
T Consensus 214 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 214 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred cChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 8888888899999999999999988888888885 8999999999765
No 76
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=5.8e-31 Score=283.97 Aligned_cols=178 Identities=24% Similarity=0.326 Sum_probs=150.9
Q ss_pred HHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 527 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
+....++|+..+.||+|+||+||+|+++.+++.||+|++.... ....+.+.+|+.+++.++||||+++++++....
T Consensus 69 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~- 147 (437)
T 4aw2_A 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN- 147 (437)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS-
T ss_pred ccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-
Confidence 3345678999999999999999999999999999999997532 223345889999999999999999999976654
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
..|+|||||+||+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 148 ----~~~lV~Ey~~gg~L~~~l~~~~~-----~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vk 215 (437)
T 4aw2_A 148 ----NLYLVMDYYVGGDLLTLLSKFED-----RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIR 215 (437)
T ss_dssp ----EEEEEECCCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred ----EEEEEEecCCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEE
Confidence 88999999999999999986432 589999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|||+|+....... ......+||+.|||||++.
T Consensus 216 L~DFGla~~~~~~~~-------~~~~~~~GT~~Y~APE~l~ 249 (437)
T 4aw2_A 216 LADFGSCLKLMEDGT-------VQSSVAVGTPDYISPEILQ 249 (437)
T ss_dssp ECCCTTCEECCTTSC-------EECCSCCSCGGGCCHHHHH
T ss_pred EcchhhhhhcccCCC-------cccccccCCcCeeChHHHh
Confidence 999999986643211 1122357999999999863
No 77
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=9.1e-31 Score=275.54 Aligned_cols=172 Identities=27% Similarity=0.386 Sum_probs=144.9
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 605 (725)
..++|+..+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|+++++.+ +||||+++++++....
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--- 97 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--- 97 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS---
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC---
Confidence 457899999999999999999999999999999999754 233456788999999988 6999999999976554
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 98 --~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 98 --RLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 7899999999999999998654 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+|+...... ......+||+.|||||++
T Consensus 167 DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~ 196 (353)
T 3txo_A 167 DFGMCKEGICNG--------VTTATFCGTPDYIAPEIL 196 (353)
T ss_dssp CCTTCBCSCC-----------------CCGGGCCHHHH
T ss_pred cccceeecccCC--------ccccccCCCcCeEChhhc
Confidence 999998543221 122346899999999975
No 78
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=6e-31 Score=281.68 Aligned_cols=177 Identities=20% Similarity=0.320 Sum_probs=150.3
Q ss_pred HHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCC
Q 048668 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTD 602 (725)
Q Consensus 526 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 602 (725)
++....++|+..+.||+|+||+||+|+++.+++.||+|++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 33445678999999999999999999999999999999997531 223356789999999999999999999976554
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCce
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~ 682 (725)
..|+|||||+||+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 143 -----~~~lV~E~~~gg~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 207 (410)
T 3v8s_A 143 -----YLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHL 207 (410)
T ss_dssp -----EEEEEECCCTTEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred -----EEEEEEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCE
Confidence 889999999999999999753 478999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+....... ....+.+||+.|||||++.
T Consensus 208 kL~DFG~a~~~~~~~~-------~~~~~~~gt~~Y~APE~l~ 242 (410)
T 3v8s_A 208 KLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLK 242 (410)
T ss_dssp EECCCTTCEECCTTSE-------EECCSCCSCGGGCCHHHHH
T ss_pred EEeccceeEeeccCCc-------ccccCCcCCccccCHHHhh
Confidence 9999999987643211 1122467999999999863
No 79
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=2.2e-30 Score=274.77 Aligned_cols=171 Identities=25% Similarity=0.404 Sum_probs=150.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE----- 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 357899999999999999999999999999999997532 344578899999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++||+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 7899999999999999998654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+.+.... .....+||+.|||||++.
T Consensus 160 G~a~~~~~~~---------~~~~~~gt~~Y~aPE~~~ 187 (384)
T 4fr4_A 160 NIAAMLPRET---------QITTMAGTKPYMAPEMFS 187 (384)
T ss_dssp TTCEECCTTC---------CBCCCCSCGGGCCGGGTC
T ss_pred ceeeeccCCC---------ceeccCCCccccCCeeec
Confidence 9998764321 122367999999999874
No 80
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=273.26 Aligned_cols=174 Identities=25% Similarity=0.368 Sum_probs=143.5
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
..++|+..+.||+|+||+||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++.... .
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN-----K 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS-----E
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----E
Confidence 3468899999999999999999999999999999997543 223457889999999999999999999976554 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEecc
Confidence 899999999999999997654 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+....... ......+||+.|+|||++.
T Consensus 154 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~ 182 (347)
T 3zgw_A 154 LCAKPKGNKD-------YHLQTCCGSLAYAAPELIQ 182 (347)
T ss_dssp TCBC---------------------CGGGCCHHHHT
T ss_pred CcccccCCCC-------ccccccCCccCccCHHHHc
Confidence 9976533211 1122357999999999863
No 81
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=3e-30 Score=267.85 Aligned_cols=181 Identities=24% Similarity=0.423 Sum_probs=150.6
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|...+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-----RLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-----eeE
Confidence 357888999999999999999999999999999986655566788999999999999999999999987654 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++|+|.++++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 84 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccc
Confidence 99999999999999987432 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCC------CCCcccccccCCccccCCCccc
Q 048668 691 KFLSSHHLDTSS------KTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 691 ~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+........... .........+||+.|+|||++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 195 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN 195 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHT
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhc
Confidence 876443221110 0011122467999999999863
No 82
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=280.01 Aligned_cols=178 Identities=24% Similarity=0.347 Sum_probs=151.0
Q ss_pred HHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 527 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
.....++|+..+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|.+++.+++||||+++++++....
T Consensus 56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~- 134 (412)
T 2vd5_A 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN- 134 (412)
T ss_dssp HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS-
T ss_pred ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-
Confidence 3345678999999999999999999999999999999997532 223456789999999999999999999976554
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
..|+||||++||+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 135 ----~~~lVmE~~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vk 202 (412)
T 2vd5_A 135 ----YLYLVMEYYVGGDLLTLLSKFGE-----RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIR 202 (412)
T ss_dssp ----EEEEEECCCCSCBHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred ----EEEEEEcCCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEE
Confidence 89999999999999999976432 589999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|||+|+....... ......+||+.|||||++.
T Consensus 203 L~DFGla~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~ 236 (412)
T 2vd5_A 203 LADFGSCLKLRADGT-------VRSLVAVGTPDYLSPEILQ 236 (412)
T ss_dssp ECCCTTCEECCTTSC-------EECSSCCSCGGGCCHHHHH
T ss_pred EeechhheeccCCCc-------cccceeccccCcCCHHHHh
Confidence 999999987643211 1122357999999999863
No 83
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=1.9e-30 Score=276.12 Aligned_cols=172 Identities=23% Similarity=0.329 Sum_probs=147.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||+||+|+++.+++.||+|+++... ....+.+.+|..+++++ +||||+++++++....
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 467999999999999999999999999999999997542 22335678999999887 7999999999976554
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 127 -~~~lV~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 127 -RLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred -EEEEEEEcCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 8999999999999999998654 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|+...... ......+||+.|||||++.
T Consensus 197 FGla~~~~~~~--------~~~~~~~gt~~Y~aPE~l~ 226 (396)
T 4dc2_A 197 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILR 226 (396)
T ss_dssp CTTCBCCCCTT--------CCBCCCCBCGGGCCHHHHT
T ss_pred cceeeecccCC--------CccccccCCcccCCchhhc
Confidence 99998532211 1223468999999999864
No 84
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=6.4e-30 Score=266.34 Aligned_cols=182 Identities=24% Similarity=0.336 Sum_probs=154.6
Q ss_pred CccCHHHHHHHhcC----------CCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCC
Q 048668 520 PMVSYAELSKATSE----------FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR 589 (725)
Q Consensus 520 ~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 589 (725)
+.++.+++..++.. |+..+.||+|+||.||+|++..+|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 44566666666543 56667899999999999999989999999999876666678899999999999999
Q ss_pred cccceeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCC
Q 048668 590 NLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDL 669 (725)
Q Consensus 590 niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdl 669 (725)
||+++++++.... ..|+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||
T Consensus 103 niv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl 167 (321)
T 2c30_A 103 NVVEMYKSYLVGE-----ELWVLMEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167 (321)
T ss_dssp TBCCEEEEEEETT-----EEEEEECCCCSCBHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred CcceEEEEEEECC-----EEEEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 9999999987655 789999999999999998743 489999999999999999999999 9999999
Q ss_pred CCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 670 KPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 670 kp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+||+++.++.+||+|||+++....... .....+||+.|+|||++.
T Consensus 168 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~ 214 (321)
T 2c30_A 168 KSDSILLTLDGRVKLSDFGFCAQISKDVP--------KRKSLVGTPYWMAPEVIS 214 (321)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECCSSSC--------CBCCCCSCGGGCCHHHHT
T ss_pred CHHHEEECCCCcEEEeeeeeeeecccCcc--------ccccccCCccccCHhhhc
Confidence 99999999999999999999987643211 112357999999999863
No 85
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=2.8e-30 Score=270.72 Aligned_cols=174 Identities=24% Similarity=0.384 Sum_probs=148.7
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCC
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFK 604 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 604 (725)
...++|+..+.||+|+||.||+|+++.+++.||||+++... ....+.+..|.++++.+ +||||+++++++....
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~-- 91 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE-- 91 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--
Confidence 45678999999999999999999999999999999997542 33456788999999987 8999999999976554
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEE
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl 684 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 92 ---~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 92 ---NLFFVMEYLNGGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred ---EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEE
Confidence 7899999999999999998654 589999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+...... ......+||+.|+|||++.
T Consensus 160 ~DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~ 191 (345)
T 1xjd_A 160 ADFGMCKENMLGD--------AKTNTFCGTPDYIAPEILL 191 (345)
T ss_dssp CCCTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHT
T ss_pred eEChhhhhcccCC--------CcccCCCCCcccCChhhhc
Confidence 9999998543221 1122468999999999863
No 86
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=5.9e-30 Score=270.02 Aligned_cols=171 Identities=26% Similarity=0.345 Sum_probs=148.2
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc------chHHHHHHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------GAFRSFVAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
.+.|+..+.||+|+||.||+|++..+|+.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 4578999999999999999999999999999999975432 13578899999999999999999999976554
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC----
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM---- 680 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~---- 680 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 89 ---DVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp ---EEEEEEECCCSCBHHHHHTTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred ---EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 7899999999999999997654 589999999999999999999999 999999999999998877
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.+||+|||+|+...... .....+||+.|+|||++.
T Consensus 157 ~vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 191 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVN 191 (361)
T ss_dssp CEEECCCSSCEECCTTC---------CCCCCCSCGGGCCHHHHT
T ss_pred CEEEEecCCceEcCCCC---------ccccCCCCccEECchHHc
Confidence 79999999998764421 112357999999999863
No 87
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=4.4e-30 Score=266.56 Aligned_cols=169 Identities=26% Similarity=0.374 Sum_probs=148.1
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||+||+|+++.+++.||+|+++... ....+.+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ----- 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS-----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC-----
Confidence 467899999999999999999999999999999997542 234567889999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 7899999999999999998654 588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+..... ....+||+.|+|||++.
T Consensus 151 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~ 176 (318)
T 1fot_A 151 GFAKYVPDV-----------TYTLCGTPDYIAPEVVS 176 (318)
T ss_dssp SSCEECSSC-----------BCCCCSCTTTCCHHHHT
T ss_pred CcceecCCc-----------cccccCCccccCHhHhc
Confidence 999865321 12357999999999863
No 88
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=4.8e-30 Score=269.50 Aligned_cols=172 Identities=24% Similarity=0.330 Sum_probs=147.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||.||+|+++.+++.||+|++.... ....+.+.+|+++++++ +||||+++++++....
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~---- 83 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 83 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC----
Confidence 357899999999999999999999999999999997543 23456788999999988 8999999999976544
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 84 -~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 153 (345)
T 3a8x_A 84 -RLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 153 (345)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred -EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEe
Confidence 8899999999999999997654 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|+...... ......+||+.|+|||++.
T Consensus 154 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~ 183 (345)
T 3a8x_A 154 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILR 183 (345)
T ss_dssp GGGCBCSCCTT--------CCBCCCCSCGGGCCHHHHT
T ss_pred ccccccccCCC--------CcccccCCCccccCccccC
Confidence 99998542211 1122367999999999863
No 89
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.8e-29 Score=273.64 Aligned_cols=249 Identities=24% Similarity=0.290 Sum_probs=218.6
Q ss_pred CCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEE
Q 048668 37 SALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELG 116 (725)
Q Consensus 37 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 116 (725)
...+.++.++++++ .+|..+. +++++|+|++|+|+.+.+..|.++++|++|+|++|+|+ .++...|.++++|++|+
T Consensus 43 ~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~ 118 (440)
T 3zyj_A 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLE 118 (440)
T ss_dssp TTSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCSSCCEEE
T ss_pred CCCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCccCCEEE
Confidence 35678999999998 6666665 68999999999999989999999999999999999998 88888899999999999
Q ss_pred ccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCC-ccCCccCCCCcccccccCCCCCCCEEEC
Q 048668 117 IGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQ-NNLGIGAANDLGFVTFLTNCSSLKVLSL 195 (725)
Q Consensus 117 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~~~~l~~L~~L~L 195 (725)
|++|+|+.+.+..|..+++|++|+|++|+|+.+++..|..+++|++|++++ |.+..++. ..|.++++|++|+|
T Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~------~~~~~l~~L~~L~L 192 (440)
T 3zyj_A 119 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE------GAFEGLSNLRYLNL 192 (440)
T ss_dssp CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT------TTTTTCSSCCEEEC
T ss_pred CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc------chhhcccccCeecC
Confidence 999999988888999999999999999999999999999999999999998 45554443 45778899999999
Q ss_pred ccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCccccc
Q 048668 196 SDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG 275 (725)
Q Consensus 196 ~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 275 (725)
++|+++. +| .+..+++|++|+|++|+++++.|..|.++++|++|+|++|++.+
T Consensus 193 ~~n~l~~--------------------------~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 193 AMCNLRE--------------------------IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp TTSCCSS--------------------------CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCcCcc--------------------------cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 9998872 22 25678899999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccC
Q 048668 276 SIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLN 334 (725)
Q Consensus 276 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~ 334 (725)
..+..|..+++|++|+|++|+|+ .+|...+.....++.|+|++|.+.
T Consensus 246 ~~~~~~~~l~~L~~L~L~~N~l~------------~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 246 IERNAFDNLQSLVEINLAHNNLT------------LLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSSTTCTTCCEEECTTSCCC------------CCCTTTTSSCTTCCEEECCSSCEE
T ss_pred EChhhhcCCCCCCEEECCCCCCC------------ccChhHhccccCCCEEEcCCCCcc
Confidence 99999999999999999999888 566666554444589999999986
No 90
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=4.8e-30 Score=269.87 Aligned_cols=173 Identities=23% Similarity=0.318 Sum_probs=148.7
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 605 (725)
..++|+..+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|.++++.+ +||+|+++++++....
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--- 94 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 94 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC---
Confidence 456899999999999999999999999999999999754 234457788999999988 7999999999876544
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
..|+||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 95 --~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 95 --RLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred --EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 8999999999999999998654 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||+|+...... ......+||+.|||||++.
T Consensus 164 DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~ 194 (353)
T 2i0e_A 164 DFGMCKENIWDG--------VTTKTFCGTPDYIAPEIIA 194 (353)
T ss_dssp CCTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHT
T ss_pred eCCcccccccCC--------cccccccCCccccChhhhc
Confidence 999998542211 1122467999999999863
No 91
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=8.5e-30 Score=260.97 Aligned_cols=226 Identities=23% Similarity=0.227 Sum_probs=183.4
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
-++++.+++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|.++++.|..|.++++|++|++++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 478999999998 667655 46899999999999988888999999999999999999988899999999999999999
Q ss_pred CC-CCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCcc
Q 048668 95 NR-FSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIG 173 (725)
Q Consensus 95 N~-l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~ 173 (725)
|+ ++ .++...|..+++|++|+|++|.++++.+..|.++++|++|+|++|+++++++..|..+++|++|++++|.++.+
T Consensus 90 n~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 90 NAQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp CTTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcc-ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 97 76 77777788999999999999999988888899999999999999999988888888888888888888888765
Q ss_pred CCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCC
Q 048668 174 AANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTI 253 (725)
Q Consensus 174 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 253 (725)
+. ..+.++++|++|++++|.+++..|. .+..+++|+.|++++|+++++.
T Consensus 169 ~~------~~~~~l~~L~~L~l~~n~l~~~~~~-------------------------~~~~l~~L~~L~l~~n~l~~~~ 217 (285)
T 1ozn_A 169 PE------RAFRGLHSLDRLLLHQNRVAHVHPH-------------------------AFRDLGRLMTLYLFANNLSALP 217 (285)
T ss_dssp CT------TTTTTCTTCCEEECCSSCCCEECTT-------------------------TTTTCTTCCEEECCSSCCSCCC
T ss_pred CH------HHhcCccccCEEECCCCcccccCHh-------------------------HccCcccccEeeCCCCcCCcCC
Confidence 54 3466778888888888887754444 4455556666666666666555
Q ss_pred ChhhcCCCCccEEeccCccccc
Q 048668 254 PDVIGELKNLQLLGLYKNFLQG 275 (725)
Q Consensus 254 ~~~~~~l~~L~~L~L~~N~l~~ 275 (725)
+..+..+++|++|++++|.+..
T Consensus 218 ~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 218 TEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp HHHHTTCTTCCEEECCSSCEEC
T ss_pred HHHcccCcccCEEeccCCCccC
Confidence 5556666666666666666653
No 92
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.7e-29 Score=273.74 Aligned_cols=249 Identities=22% Similarity=0.259 Sum_probs=215.9
Q ss_pred CCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEc
Q 048668 38 ALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGI 117 (725)
Q Consensus 38 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 117 (725)
....++.++++++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+ .++...|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEEC
Confidence 4678999999998 5666555 68999999999999988999999999999999999998 777778889999999999
Q ss_pred cCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCC-ccCCccCCCCcccccccCCCCCCCEEECc
Q 048668 118 GANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQ-NNLGIGAANDLGFVTFLTNCSSLKVLSLS 196 (725)
Q Consensus 118 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~~~~l~~L~~L~L~ 196 (725)
++|+|+.+.+..|..+++|++|+|++|+|+.+++..|..+++|++|++++ |.+..++. ..+.++++|++|+|+
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~------~~~~~l~~L~~L~L~ 204 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE------GAFEGLFNLKYLNLG 204 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT------TTTTTCTTCCEEECT
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh------hhccCCCCCCEEECC
Confidence 99999988888899999999999999999999988999999999999998 55554443 346788889999998
Q ss_pred cCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccC
Q 048668 197 DNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGS 276 (725)
Q Consensus 197 ~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 276 (725)
+|++++ +| .+..+++|++|+|++|++.++.|..|.++++|++|+|++|.+.+.
T Consensus 205 ~n~l~~--------------------------~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 205 MCNIKD--------------------------MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp TSCCSS--------------------------CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred CCcccc--------------------------cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 888872 12 256788999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCC
Q 048668 277 IPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNG 335 (725)
Q Consensus 277 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~ 335 (725)
.+..|..+++|++|+|++|+|+ .+|...+.....++.|+|++|.+.-
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~------------~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLS------------SLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCS------------CCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CHHHhcCCCCCCEEECCCCcCC------------ccChHHhccccCCCEEEccCCCcCC
Confidence 9999999999999999999887 5666665544445899999999873
No 93
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=1.3e-29 Score=265.91 Aligned_cols=188 Identities=26% Similarity=0.417 Sum_probs=148.5
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC-----
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF----- 603 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 603 (725)
..++|+..+.||+|+||.||+|+++.+++.||||++.... ....+.+.+|++++++++||||++++++|.....
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3467899999999999999999999999999999997543 3456789999999999999999999999865431
Q ss_pred -----------------------------------------------CCcceeeEEEeccCCCCHHHHhcccCCcccccc
Q 048668 604 -----------------------------------------------KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCK 636 (725)
Q Consensus 604 -----------------------------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~ 636 (725)
....+.++||||+++|+|.+++...... ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~ 160 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL---ED 160 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG---GG
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc---cc
Confidence 1122479999999999999999876532 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccccccccCCCCCCC----CCCccccccc
Q 048668 637 LSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSS----KTPSSSIGIK 712 (725)
Q Consensus 637 ~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~----~~~~~~~~~~ 712 (725)
.++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+........... .........+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 57778899999999999999999 9999999999999999999999999999876543211110 0011223357
Q ss_pred CCccccCCCcc
Q 048668 713 GTVGYVAPGKF 723 (725)
Q Consensus 713 gt~~y~aPE~~ 723 (725)
||+.|+|||++
T Consensus 238 gt~~y~aPE~~ 248 (332)
T 3qd2_B 238 GTKLYMSPEQI 248 (332)
T ss_dssp -CGGGSCHHHH
T ss_pred CCcCccChHHh
Confidence 99999999975
No 94
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.96 E-value=6.7e-30 Score=268.76 Aligned_cols=169 Identities=25% Similarity=0.353 Sum_probs=148.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----- 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-----
Confidence 357899999999999999999999999999999997542 234578899999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 7899999999999999998654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+..... ....+||+.|+|||++.
T Consensus 186 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~ 211 (350)
T 1rdq_E 186 GFAKRVKGR-----------TWTLCGTPEALAPEIIL 211 (350)
T ss_dssp TTCEECSSC-----------BCCCEECGGGCCHHHHT
T ss_pred ccceeccCC-----------cccccCCccccCHHHhc
Confidence 999865322 12357999999999863
No 95
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.96 E-value=6.5e-30 Score=280.23 Aligned_cols=184 Identities=23% Similarity=0.361 Sum_probs=140.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||+||+|+++.+++.||||++... .....+++.+|++++++++||||+++++++....++....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 35799999999999999999999999999999999643 2334578899999999999999999999987766666678
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+ +|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecc-ccchhhhcccCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 99999998 569999997654 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCC-------------------CCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSS-------------------KTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~-------------------~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+........... .........+||++|||||+++
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 256 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence 99876432211000 0001233467999999999763
No 96
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.7e-30 Score=264.65 Aligned_cols=236 Identities=21% Similarity=0.218 Sum_probs=190.1
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCcc--CCCCCCCCCCCCEEEccCCcccccCcccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGK--FPTTLGLLRNLVQLNVAENKFYGMFPRSI 81 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 81 (725)
+||..+. ++|++|+|++|+++...+..|..+++|++|+|++|+++.. .+..+..+++|++|+|++|.++ .+|..+
T Consensus 21 ~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~ 97 (306)
T 2z66_A 21 SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNF 97 (306)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEE
T ss_pred cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhc
Confidence 5787776 4899999999999955556789999999999999999843 3677778999999999999998 467779
Q ss_pred cccCCCceeeccCCCCCCCCCh-hhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccc-cCccCcccccc
Q 048668 82 CNISSLEYFYLTSNRFSGSLPF-DIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKG-KVSIDFSSLKI 159 (725)
Q Consensus 82 ~~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~f~~l~~ 159 (725)
.++++|++|++++|+++ .++. ..+..+++|++|++++|.+++..+..|..+++|++|+|++|++++ ..+..|..+++
T Consensus 98 ~~l~~L~~L~l~~n~l~-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 176 (306)
T 2z66_A 98 LGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 176 (306)
T ss_dssp ETCTTCCEEECTTSEEE-SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred CCCCCCCEEECCCCccc-ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcC
Confidence 99999999999999998 5654 678899999999999999999999999999999999999999987 67788999999
Q ss_pred cCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCccccccc-C
Q 048668 160 LWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLV-N 238 (725)
Q Consensus 160 L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~-~ 238 (725)
|++|++++|.++...+ ..+.++++|++|+|++|++++..+..+..++ .|+.|++++|.+.+..|..+..++ +
T Consensus 177 L~~L~Ls~n~l~~~~~------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~ 249 (306)
T 2z66_A 177 LTFLDLSQCQLEQLSP------TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN-SLQVLDYSLNHIMTSKKQELQHFPSS 249 (306)
T ss_dssp CCEEECTTSCCCEECT------TTTTTCTTCCEEECTTSCCSBCCSGGGTTCT-TCCEEECTTSCCCBCSSSSCCCCCTT
T ss_pred CCEEECCCCCcCCcCH------HHhcCCCCCCEEECCCCccCccChhhccCcc-cCCEeECCCCCCcccCHHHHHhhhcc
Confidence 9999999999987655 4577899999999999999865444444444 444555555555444444444442 4
Q ss_pred CceEEecccccC
Q 048668 239 LIALAVEVNQLH 250 (725)
Q Consensus 239 L~~L~L~~N~l~ 250 (725)
|++|+|++|.+.
T Consensus 250 L~~L~L~~N~~~ 261 (306)
T 2z66_A 250 LAFLNLTQNDFA 261 (306)
T ss_dssp CCEEECTTCCEE
T ss_pred CCEEEccCCCee
Confidence 444444444444
No 97
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96 E-value=9.7e-30 Score=265.58 Aligned_cols=170 Identities=27% Similarity=0.448 Sum_probs=147.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT----- 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 467999999999999999999999999999999997432 233467899999999999999999999977654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..++||||+ +|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred EEEEEEECC-CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 789999999 789999987654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+....... ....+||+.|+|||++.
T Consensus 153 G~s~~~~~~~~---------~~~~~gt~~y~aPE~~~ 180 (336)
T 3h4j_B 153 GLSNIMTDGNF---------LKTSCGSPNYAAPEVIN 180 (336)
T ss_dssp SCTBTTTTSBT---------TCCCTTSTTTSCGGGSC
T ss_pred ccceeccCCcc---------cccccCCcCcCCHHHHc
Confidence 99986643321 12357999999999863
No 98
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.96 E-value=5.6e-30 Score=266.94 Aligned_cols=173 Identities=24% Similarity=0.387 Sum_probs=146.7
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc-chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.... ..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----eE
Confidence 4689999999999999999999999999999999975432 23467889999999999999999999987654 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 99999999999999997654 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+.+...... ......+||+.|+|||++
T Consensus 152 a~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 179 (323)
T 3tki_A 152 ATVFRYNNRE------RLLNKMCGTLPYVAPELL 179 (323)
T ss_dssp CEECEETTEE------CCBCSCCSCGGGSCHHHH
T ss_pred cceeccCCcc------cccCCCccCcCccCcHHh
Confidence 9876432211 111235799999999986
No 99
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=7.6e-30 Score=262.46 Aligned_cols=172 Identities=26% Similarity=0.453 Sum_probs=143.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+++.+|++++++++||||+++++++....
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD----- 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS-----
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC-----
Confidence 357899999999999999999999999999999986542 233568899999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++||+|.+++.... .+++..++.++.|++.||+|+|+. +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeC
Confidence 7899999999999999998654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+........ .....+||+.|+|||++
T Consensus 156 g~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~ 184 (294)
T 4eqm_A 156 GIAKALSETSLT-------QTNHVLGTVQYFSPEQA 184 (294)
T ss_dssp SSSTTC--------------------CCSSCCHHHH
T ss_pred CCcccccccccc-------ccCccccCccccCHhHh
Confidence 999876432111 11235699999999975
No 100
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.5e-29 Score=259.08 Aligned_cols=215 Identities=20% Similarity=0.209 Sum_probs=190.5
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCc-ccccCccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENK-FYGMFPRSIC 82 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~ 82 (725)
+||..+. ++|++|+|++|.+++..+..|..+++|++|+|++|+++++.|..|..+++|++|+|++|. ++.+.|..|.
T Consensus 25 ~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~ 102 (285)
T 1ozn_A 25 AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFH 102 (285)
T ss_dssp SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTT
T ss_pred cCCcCCC--CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhc
Confidence 5777665 489999999999997777899999999999999999998889999999999999999997 8877899999
Q ss_pred ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCe
Q 048668 83 NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWR 162 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~ 162 (725)
++++|++|++++|+++ .++...|.++++|++|+|++|+++++.+..|..+++|++|+|++|+|+++++..|..+++|++
T Consensus 103 ~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 181 (285)
T 1ozn_A 103 GLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 181 (285)
T ss_dssp TCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCcCCCEEECCCCcCC-EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCE
Confidence 9999999999999998 677777889999999999999999988888999999999999999999999989999999999
Q ss_pred eecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceec
Q 048668 163 LNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGT 228 (725)
Q Consensus 163 L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~ 228 (725)
|++++|.++...+ ..+.++++|++|++++|++++..+..+..++ .|+.|++++|.+.+.
T Consensus 182 L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 182 LLLHQNRVAHVHP------HAFRDLGRLMTLYLFANNLSALPTEALAPLR-ALQYLRLNDNPWVCD 240 (285)
T ss_dssp EECCSSCCCEECT------TTTTTCTTCCEEECCSSCCSCCCHHHHTTCT-TCCEEECCSSCEECS
T ss_pred EECCCCcccccCH------hHccCcccccEeeCCCCcCCcCCHHHcccCc-ccCEEeccCCCccCC
Confidence 9999999987654 4577899999999999999965555566555 566666666666543
No 101
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.96 E-value=1.6e-29 Score=267.61 Aligned_cols=172 Identities=25% Similarity=0.428 Sum_probs=147.9
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
..++|+..+.||+|+||.||+|+++.+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----- 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----- 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 3467999999999999999999999999999999997653 234567899999999999999999999977654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC---CceEE
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHV 684 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~---~~~kl 684 (725)
..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.+ +.+||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 7899999999999999997654 589999999999999999999999 99999999999999865 45999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+....... ....+||+.|+|||++.
T Consensus 173 ~DfG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~ 203 (362)
T 2bdw_A 173 ADFGLAIEVNDSEA---------WHGFAGTPGYLSPEVLK 203 (362)
T ss_dssp CCCTTCBCCTTCCS---------CCCSCSCTTTCCHHHHT
T ss_pred eecCcceEecCCcc---------cccCCCCccccCHHHHc
Confidence 99999986643211 12357999999999863
No 102
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.2e-28 Score=274.21 Aligned_cols=68 Identities=22% Similarity=0.255 Sum_probs=40.6
Q ss_pred CCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCC
Q 048668 344 LKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENL 416 (725)
Q Consensus 344 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 416 (725)
+++|+.|+|++|.|+. +|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.+++..|..+..+
T Consensus 240 l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 240 PSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 3456666666666653 333 3456666666666666 445566666666666666666666666555543
No 103
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=273.84 Aligned_cols=173 Identities=24% Similarity=0.349 Sum_probs=147.3
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
..++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG----- 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----
Confidence 4567999999999999999999999999999999997653 234567899999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec---CCCceEE
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHV 684 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~---~~~~~kl 684 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||
T Consensus 84 ~~~lv~E~~~gg~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL 154 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKL 154 (444)
T ss_dssp EEEEEECCCBCCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEE
T ss_pred EEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEE
Confidence 8899999999999999998654 589999999999999999999999 999999999999998 4678999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+....... .....+||++|||||++.
T Consensus 155 ~DFG~a~~~~~~~~--------~~~~~~gt~~Y~APE~l~ 186 (444)
T 3soa_A 155 ADFGLAIEVEGEQQ--------AWFGFAGTPGYLSPEVLR 186 (444)
T ss_dssp CCCSSCBCCCTTCC--------BCCCSCSCGGGCCHHHHT
T ss_pred ccCceeEEecCCCc--------eeecccCCcccCCHHHhc
Confidence 99999986643211 112357999999999863
No 104
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=8.6e-30 Score=269.80 Aligned_cols=172 Identities=31% Similarity=0.432 Sum_probs=139.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHH-HHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEA-LRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|..+ ++.++||||+++++++....
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 457999999999999999999999999999999997543 2234566777776 56789999999999976554
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 113 -~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 113 -KLYFVLDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 8999999999999999998654 588999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|+....... .....+||+.|||||++.
T Consensus 183 FG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~ 212 (373)
T 2r5t_A 183 FGLCKENIEHNS--------TTSTFCGTPEYLAPEVLH 212 (373)
T ss_dssp CCBCGGGBCCCC--------CCCSBSCCCCCCCHHHHT
T ss_pred CccccccccCCC--------ccccccCCccccCHHHhC
Confidence 999986432211 122368999999999863
No 105
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=262.28 Aligned_cols=169 Identities=25% Similarity=0.351 Sum_probs=146.8
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc------chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
+.|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 468899999999999999999999999999999975432 13578999999999999999999999976554
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC----c
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM----V 681 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~----~ 681 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 88 --~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 88 --DVILILELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp --EEEEEEECCCSCBHHHHHTTSS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCC
T ss_pred --EEEEEEEcCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCC
Confidence 7899999999999999997643 589999999999999999999999 999999999999999887 7
Q ss_pred eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||+|+....... ....+||+.|+|||++
T Consensus 157 ~kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~ 189 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGNE---------FKNIFGTPEFVAPEIV 189 (326)
T ss_dssp EEECCCTTCEECCTTSC---------CCCCCSCTTTCCHHHH
T ss_pred EEEEECCCCeECCCCCc---------cccccCCcCcCCceee
Confidence 99999999987643211 1125699999999976
No 106
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.6e-29 Score=263.03 Aligned_cols=171 Identities=20% Similarity=0.303 Sum_probs=147.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... .....+.+|+++++.++||||+++++++.... ..|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-----ELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-----EEE
Confidence 457899999999999999999999999999999997543 34467889999999999999999999986654 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC--CCceEEcccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH--DMVAHVGDFG 688 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~--~~~~kl~Dfg 688 (725)
+||||++||+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAF-----ELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 99999999999999976432 589999999999999999999999 9999999999999997 7899999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+.+.... ......||+.|+|||++.
T Consensus 150 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 176 (321)
T 1tki_A 150 QARQLKPGD---------NFRLLFTAPEYYAPEVHQ 176 (321)
T ss_dssp TCEECCTTC---------EEEEEESCGGGSCHHHHT
T ss_pred CCeECCCCC---------ccccccCChhhcCcHHhc
Confidence 998764321 122356999999999863
No 107
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.96 E-value=2.1e-29 Score=262.07 Aligned_cols=177 Identities=24% Similarity=0.436 Sum_probs=134.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.++|+..+.||+|+||.||+|+++.+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN-----KL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-----EE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-----eE
Confidence 467999999999999999999999999999999997553 334477889999999999999999999976544 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||++ |+|.+++...........+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999997 59999987543222223588999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+....... .....+||+.|+|||++.
T Consensus 155 ~~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 181 (317)
T 2pmi_A 155 ARAFGIPVN--------TFSSEVVTLWYRAPDVLM 181 (317)
T ss_dssp CEETTSCCC--------CCCCCCSCCTTCCHHHHT
T ss_pred ceecCCCcc--------cCCCCcccccccCchHhh
Confidence 987643211 111246999999999863
No 108
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.96 E-value=1.8e-29 Score=278.60 Aligned_cols=173 Identities=25% Similarity=0.383 Sum_probs=149.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|+++.+|+.||||++... .......+.+|++++++++||||+++++++....
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----- 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----
Confidence 45788899999999999999999999999999999753 2334567889999999999999999999876544
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++||+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 89999999999999999976542 2489999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+...... .....+||+.|||||++.
T Consensus 331 Gla~~~~~~~---------~~~~~~GT~~Y~APEvl~ 358 (576)
T 2acx_A 331 GLAVHVPEGQ---------TIKGRVGTVGYMAPEVVK 358 (576)
T ss_dssp TTCEECCTTC---------CEECCCSCGGGCCHHHHT
T ss_pred ccceecccCc---------cccccCCCccccCHHHHc
Confidence 9998764321 112357999999999863
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=260.04 Aligned_cols=173 Identities=27% Similarity=0.426 Sum_probs=142.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--------------------------chHHHHHHHHHHHH
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------------------------GAFRSFVAECEALR 584 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 584 (725)
.++|+..+.||+|+||.||+|++..+++.||||++..... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999975421 12356889999999
Q ss_pred cCCCCcccceeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 048668 585 NIRHRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPM 664 (725)
Q Consensus 585 ~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 664 (725)
+++||||+++++++.... .+..|+||||+++++|.+++... .+++..+..++.|++.||+|||++ +|
T Consensus 92 ~l~h~~iv~~~~~~~~~~---~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPN---EDHLYMVFELVNQGPVMEVPTLK-------PLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECSS---SSEEEEEEECCTTCBSCCSSCSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEcCC---CCEEEEEEecCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 999999999999986532 24789999999999998865432 589999999999999999999999 99
Q ss_pred EecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 665 VHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 665 vHrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+||||||+||+++.++.+||+|||+|+....... ......||+.|+|||++.
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~ 210 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--------LLSNTVGTPAFMAPESLS 210 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC--------EECCCCSCGGGCCGGGCC
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccc--------cccCCcCCccccChhhhc
Confidence 9999999999999999999999999987643211 112356999999999863
No 110
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=4.5e-28 Score=271.74 Aligned_cols=266 Identities=26% Similarity=0.242 Sum_probs=148.8
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
++++|++++|.++ .+|..+. ++|++|+|++|+|+. +|. .+++|++|+|++|+|++ +|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4677777777777 5666554 677777777777763 333 35677777777777764 333 55677777777
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCcc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIG 173 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~ 173 (725)
+|+|+ .+|. .+++|+.|+|++|+|+.+++ . +++|++|+|++|+|++++. .+++|+.|++++|.++.+
T Consensus 110 ~N~l~-~l~~----~l~~L~~L~L~~N~l~~lp~-~---l~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l 176 (622)
T 3g06_A 110 SNPLT-HLPA----LPSGLCKLWIFGNQLTSLPV-L---PPGLQELSVSDNQLASLPA----LPSELCKLWAYNNQLTSL 176 (622)
T ss_dssp SCCCC-CCCC----CCTTCCEEECCSSCCSCCCC-C---CTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCC
T ss_pred CCcCC-CCCC----CCCCcCEEECCCCCCCcCCC-C---CCCCCEEECcCCcCCCcCC----ccCCCCEEECCCCCCCCC
Confidence 77776 5554 45667777777777665432 2 3666777777776665542 234555666666665543
Q ss_pred CCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCC
Q 048668 174 AANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTI 253 (725)
Q Consensus 174 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 253 (725)
+ ..+++|++|++++|++++ +|.. +++|+.|++++|.++.+.
T Consensus 177 ~----------~~~~~L~~L~Ls~N~l~~--------------------------l~~~---~~~L~~L~L~~N~l~~l~ 217 (622)
T 3g06_A 177 P----------MLPSGLQELSVSDNQLAS--------------------------LPTL---PSELYKLWAYNNRLTSLP 217 (622)
T ss_dssp C----------CCCTTCCEEECCSSCCSC--------------------------CCCC---CTTCCEEECCSSCCSSCC
T ss_pred c----------ccCCCCcEEECCCCCCCC--------------------------CCCc---cchhhEEECcCCcccccC
Confidence 2 123455555555555542 1111 234555555555555332
Q ss_pred ChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCcc
Q 048668 254 PDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLL 333 (725)
Q Consensus 254 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l 333 (725)
. .+++|++|+|++|.|++ +| ..+++|+.|++++|+|+ .+|.
T Consensus 218 -~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~------------~lp~------------------- 258 (622)
T 3g06_A 218 -A---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT------------SLPM------------------- 258 (622)
T ss_dssp -C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS------------CCCC-------------------
T ss_pred -C---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC------------cCCc-------------------
Confidence 1 12455666666665553 33 23345555555555444 2222
Q ss_pred CCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccC
Q 048668 334 NGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGF 391 (725)
Q Consensus 334 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 391 (725)
.+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|.+++..|..+..
T Consensus 259 ---------~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 259 ---------LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 306 (622)
T ss_dssp ---------CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHH
T ss_pred ---------ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHh
Confidence 2345555555555555 44455555555555555555555555544443
No 111
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.96 E-value=1.5e-29 Score=266.89 Aligned_cols=176 Identities=24% Similarity=0.349 Sum_probs=146.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-----cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-----KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
.+.|+..+.||+|+||.||+|+++.+++.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 99 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--- 99 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 357899999999999999999999999999999997432 124578999999999999999999999987654
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc---e
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---A 682 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~---~ 682 (725)
..|+|||||+||+|.+++..... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +
T Consensus 100 --~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 100 --MLYMVFEFMDGADLCFEIVKRAD--AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp --EEEEEEECCSSCBHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred --EEEEEEeCCCCCCHHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 78999999999999988865321 112478999999999999999999999 9999999999999987654 9
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+....... .....+||+.|+|||++.
T Consensus 173 kl~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~ 206 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGL--------VAGGRVGTPHFMAPEVVK 206 (351)
T ss_dssp EECCCTTCEECCTTSC--------BCCCCCSCGGGCCHHHHT
T ss_pred EEecCcceeEecCCCe--------eecCCcCCcCccCHHHHc
Confidence 9999999987644321 112357999999999863
No 112
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96 E-value=3.7e-29 Score=257.26 Aligned_cols=171 Identities=25% Similarity=0.438 Sum_probs=145.1
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
++|+..+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-----KL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-----EE
Confidence 57889999999999999999999999999999997543 334577889999999999999999999987654 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
++||||+++ ++.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCNG-----DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 999999975 66666654332 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+....... .....+||+.|+|||++.
T Consensus 148 ~~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 174 (292)
T 3o0g_A 148 ARAFGIPVR--------CYSAEVVTLWYRPPDVLF 174 (292)
T ss_dssp CEECCSCCS--------CCCSCCSCGGGCCHHHHT
T ss_pred ceecCCccc--------cccCCccccCCcChHHHc
Confidence 987643211 112256999999999863
No 113
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=1.6e-29 Score=263.66 Aligned_cols=181 Identities=36% Similarity=0.605 Sum_probs=152.1
Q ss_pred HHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 526 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
++...+++|+..+.||+|+||.||+|+++ +++.||||++........+++.+|++++++++||||+++++++....
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN--- 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT---
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC---
Confidence 34446789999999999999999999975 68899999987766666788999999999999999999999976543
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 181 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKIT 181 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSCCC--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEEC
T ss_pred --eEEEEEEcCCCCcHHHHHhccCCC--ccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEe
Confidence 789999999999999999765321 22589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+++........ .......||+.|+|||++
T Consensus 182 Dfg~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 213 (321)
T 2qkw_B 182 DFGISKKGTELDQT------HLSTVVKGTLGYIDPEYF 213 (321)
T ss_dssp CCTTCEECSSSSCC------CCBCCCEEETTTCCHHHH
T ss_pred eccccccccccccc------ccccccCCCccccCHHHh
Confidence 99999865432111 111234699999999975
No 114
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=3.3e-29 Score=266.03 Aligned_cols=179 Identities=23% Similarity=0.445 Sum_probs=146.9
Q ss_pred hcCCCCCcccccccceEEEEEEEC-------CCceEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCcccceeeEeecC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILG-------EDEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICSST 601 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 601 (725)
.++|+..+.||+|+||.||+|++. .++..||||+++... ....+++.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999863 356789999997543 33457899999999999 899999999997654
Q ss_pred CCCCcceeeEEEeccCCCCHHHHhcccCCc----------cccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 048668 602 DFKGVDFKALVFEYMGNGSLEDWLHQSNDQ----------VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKP 671 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp 671 (725)
. ..|+||||+++|+|.+++...... .....+++..++.++.||+.||+|||++ +|+||||||
T Consensus 160 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 160 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred C-----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 4 789999999999999999865421 0112578999999999999999999999 999999999
Q ss_pred CCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 672 SNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 672 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+++.++.+||+|||+|+......... ......||+.|||||++
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~ 277 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYK------KTTNGRLPVKWMAPEAL 277 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTC------TTTTTTSCGGGCCHHHH
T ss_pred hhEEECCCCCEEEccccCCcccCccccee------cccCCCcccceECHhHh
Confidence 99999999999999999998764432111 11224588999999975
No 115
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=3.3e-29 Score=266.67 Aligned_cols=172 Identities=22% Similarity=0.316 Sum_probs=148.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.+.|+..+.||+|+||.||+|++..+++.||+|++..........+.+|++++++++||||+++++++.... ..|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-----EMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-----EEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC-----EEE
Confidence 457999999999999999999999999999999997665445567899999999999999999999976554 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC--CCceEEcccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH--DMVAHVGDFG 688 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~--~~~~kl~Dfg 688 (725)
+||||+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 125 lv~E~~~gg~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDY-----KMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTC-----CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 99999999999999976432 589999999999999999999999 9999999999999974 4689999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+...... .....+||+.|+|||++.
T Consensus 197 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 223 (387)
T 1kob_A 197 LATKLNPDE---------IVKVTTATAEFAAPEIVD 223 (387)
T ss_dssp TCEECCTTS---------CEEEECSSGGGCCHHHHT
T ss_pred cceecCCCc---------ceeeeccCCCccCchhcc
Confidence 998764321 112246999999999863
No 116
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=2.5e-29 Score=262.57 Aligned_cols=172 Identities=23% Similarity=0.336 Sum_probs=137.7
Q ss_pred hcCCCCCcccccccceEEEEEEEC---CCceEEEEEEeeccc----cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ----KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
.++|+..+.||+|+||.||+|++. .+++.||+|+++... ......+.+|++++++++||||+++++++....
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 467999999999999999999984 688999999997542 223456789999999999999999999976554
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 95 ----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 95 ----KLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ----CEEEEEECCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred ----EEEEEEeCCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 7899999999999999997654 578999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|||+|+....... .....+||+.|+|||++.
T Consensus 162 l~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~ 194 (327)
T 3a62_A 162 LTDFGLCKESIHDGT--------VTHTFCGTIEYMAPEILM 194 (327)
T ss_dssp ECCCSCC------------------CTTSSCCTTSCHHHHT
T ss_pred EEeCCcccccccCCc--------cccccCCCcCccCHhhCc
Confidence 999999975432211 112357999999999863
No 117
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.96 E-value=3e-29 Score=272.27 Aligned_cols=184 Identities=23% Similarity=0.326 Sum_probs=149.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||||++... .....+++.+|++++++++||||+++++++....+.....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 45899999999999999999999999999999999753 2334578899999999999999999999987766555567
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||++ |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 899999996 59999997653 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCC--------------CCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSS--------------KTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~--------------~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+........... .........+||++|+|||+++
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 224 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 224 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence 99876443211000 0001224568999999999853
No 118
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=2.7e-29 Score=262.70 Aligned_cols=190 Identities=37% Similarity=0.657 Sum_probs=158.2
Q ss_pred CCccCHHHHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc-chHHHHHHHHHHHHcCCCCcccceeeE
Q 048668 519 FPMVSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITI 597 (725)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~ 597 (725)
...++..++....++|+..+.||+|+||.||+|++. +++.||||++..... ....++.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 345678899999999999999999999999999865 688999999975432 223468899999999999999999999
Q ss_pred eecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec
Q 048668 598 CSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 677 (725)
Q Consensus 598 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~ 677 (725)
+.... ..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++
T Consensus 96 ~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 96 CMTPT-----ERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp ECCSS-----CCEEEEECCTTCBHHHHHHCCSTT--CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred EecCC-----ceEEEEEeccCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 86554 679999999999999999865422 22589999999999999999999998777999999999999999
Q ss_pred CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 678 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
.++.+||+|||+|+....... .......||+.|+|||++
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~ 207 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDT-------HVTTAVRGTIGHIAPEYL 207 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSS-------CEECCCCSCGGGCCHHHH
T ss_pred CCCCEEeccCccccccCcccc-------cccccccCCcCccCHHHh
Confidence 999999999999987643211 112235699999999975
No 119
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.96 E-value=3.1e-29 Score=273.29 Aligned_cols=171 Identities=30% Similarity=0.470 Sum_probs=149.1
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|...+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----- 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS----- 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----
Confidence 457889999999999999999999999999999997542 234567899999999999999999999976654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 7899999999999999997654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+...... .....+||+.|+|||++.
T Consensus 161 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 188 (476)
T 2y94_A 161 GLSNMMSDGE---------FLRTSCGSPNYAAPEVIS 188 (476)
T ss_dssp SSCEECCTTC---------CBCCCCSCSTTCCHHHHT
T ss_pred cchhhccccc---------cccccCCCcCeEChhhcc
Confidence 9998764321 112357999999999863
No 120
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=261.78 Aligned_cols=175 Identities=28% Similarity=0.483 Sum_probs=143.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCc---eEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDE---MIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||.||+|++..++ ..||||++... .....+.|.+|++++++++||||+++++++...
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG----- 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG-----
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 356888899999999999999997544 45999999754 233457899999999999999999999997544
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
+..|+||||+++|+|.++++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CccEEEeeCCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECC
Confidence 378999999999999999975532 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+........ ........||+.|+|||++
T Consensus 195 fg~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~ 226 (325)
T 3kul_A 195 FGLSRVLEDDPDA-----AYTTTGGKIPIRWTAPEAI 226 (325)
T ss_dssp CSSCEECC----C-----CEECC---CCGGGSCHHHH
T ss_pred CCcccccccCccc-----eeeccCCCCcccccCHhHh
Confidence 9999876443211 1112224578899999975
No 121
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=4.3e-29 Score=275.09 Aligned_cols=175 Identities=24% Similarity=0.398 Sum_probs=149.3
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
++|...+.||+|+||+||+|+++.+|+.||+|++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~-----~ 259 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT-----D 259 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC-----E
Confidence 57888899999999999999999999999999997542 234577899999999999999999999876554 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||++||+|.+++...... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||
T Consensus 260 l~lVmE~~~gg~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 260 LCLVMTIMNGGDIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp EEEEECCCTTCBHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEEeccCCCHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecc
Confidence 89999999999999999764321 12589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+.+..... .....+||+.|||||++.
T Consensus 335 la~~~~~~~~--------~~~~~~GT~~Y~APE~l~ 362 (543)
T 3c4z_A 335 LAVELKAGQT--------KTKGYAGTPGFMAPELLL 362 (543)
T ss_dssp TCEECCTTCC--------CBCCCCSCTTTSCHHHHT
T ss_pred eeeeccCCCc--------ccccccCCccccChhhhc
Confidence 9987643311 112357999999999864
No 122
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.96 E-value=1.3e-29 Score=276.57 Aligned_cols=171 Identities=27% Similarity=0.352 Sum_probs=138.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||||++... ......++.+|++++++++||||+++++++....
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 46799999999999999999999999999999999753 2334567889999999999999999999987655
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred EEEEEEeeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 7899999999999999997654 58999999999999999999998 7 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+...... ......+||+.|||||++
T Consensus 293 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~ 321 (446)
T 4ejn_A 293 FGLCKEGIKDG--------ATMKTFCGTPEYLAPEVL 321 (446)
T ss_dssp CCCCCTTCC-------------CCSSSCGGGCCHHHH
T ss_pred CCCceeccCCC--------cccccccCCccccCHhhc
Confidence 99997543221 112236799999999985
No 123
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=1.7e-29 Score=260.12 Aligned_cols=177 Identities=27% Similarity=0.454 Sum_probs=144.4
Q ss_pred hcCCCCCcccccccceEEEEEE----ECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGI----LGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||.||+|+ +..+++.||||++........+++.+|++++++++||||+++++++...+ .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---H
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 3578899999999999999998 45688999999998665556678999999999999999999999875432 2
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 157 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc-----ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEcc
Confidence 357899999999999999976532 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+......... .......||..|+|||++
T Consensus 158 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 189 (295)
T 3ugc_A 158 FGLTKVLPQDKEFF-----KVKEPGESPIFWYAPESL 189 (295)
T ss_dssp CCSCC------------------CTTCGGGGCCHHHH
T ss_pred CcccccccCCccee-----eeccCCCCccceeCcHHh
Confidence 99998764432111 111124588899999975
No 124
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=5.1e-30 Score=269.24 Aligned_cols=169 Identities=21% Similarity=0.268 Sum_probs=137.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--------cchHHHHHHHHHHHHcCC---------CCcccc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--------KGAFRSFVAECEALRNIR---------HRNLIK 593 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 593 (725)
.++|+..+.||+|+||+||+|++ +++.||||++.... ....+.+.+|++++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 45788999999999999999998 67999999997542 223478899999999886 666666
Q ss_pred eeeEeecC-------------------------CCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHH
Q 048668 594 IITICSST-------------------------DFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAID 648 (725)
Q Consensus 594 l~~~~~~~-------------------------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~ 648 (725)
+.+++... ++...+..|+||||+++|++.+.+.+. .+++..+..++.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-------~~~~~~~~~i~~q 169 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-------LSSLATAKSILHQ 169 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-------CCCHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-------CCCHHHHHHHHHH
Confidence 66654211 011245789999999999777666432 4789999999999
Q ss_pred HHHHHHHHH-hcCCCCcEecCCCCCCeeecCCC--------------------ceEEcccccccccccCCCCCCCCCCcc
Q 048668 649 VASAIEYLH-HHCQPPMVHGDLKPSNVLLDHDM--------------------VAHVGDFGLAKFLSSHHLDTSSKTPSS 707 (725)
Q Consensus 649 i~~~l~~lH-~~~~~~ivHrdlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~ 707 (725)
|+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 170 i~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----------- 235 (336)
T 2vuw_A 170 LTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----------- 235 (336)
T ss_dssp HHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------
T ss_pred HHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------
Confidence 999999999 88 999999999999999887 8999999999876432
Q ss_pred cccccCCccccCCCccc
Q 048668 708 SIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 708 ~~~~~gt~~y~aPE~~~ 724 (725)
..+||+.|||||++.
T Consensus 236 --~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFT 250 (336)
T ss_dssp --EEECCCCTTCSGGGC
T ss_pred --cEEEeecccChhhhc
Confidence 247999999999874
No 125
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.96 E-value=3.6e-29 Score=264.87 Aligned_cols=169 Identities=25% Similarity=0.340 Sum_probs=139.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+.++++++||||+++++++.... ..|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT-----HLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC-----EEE
Confidence 4579999999999999999999999999999999975432 2367889999999999999999999987654 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc--eEEcccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV--AHVGDFG 688 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~--~kl~Dfg 688 (725)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 93 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 9999999999999997654 589999999999999999999999 9999999999999987765 9999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+...... .....+||+.|+|||++
T Consensus 164 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~ 189 (361)
T 3uc3_A 164 YSKSSVLHS---------QPKSTVGTPAYIAPEVL 189 (361)
T ss_dssp CC------------------------CTTSCHHHH
T ss_pred ccccccccC---------CCCCCcCCCCcCChhhh
Confidence 997432221 11225699999999986
No 126
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=3.9e-29 Score=265.54 Aligned_cols=166 Identities=25% Similarity=0.359 Sum_probs=138.7
Q ss_pred CCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeEEEec
Q 048668 536 SSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEY 615 (725)
Q Consensus 536 ~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 615 (725)
..+.||+|+||.||+|++..+++.||+|+++.......+++.+|++++++++||||+++++++.... ..++||||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~lv~E~ 167 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-----DIVLVMEY 167 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EEEEEEEC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEEEEEeC
Confidence 3568999999999999999999999999998765556678999999999999999999999987654 78999999
Q ss_pred cCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee--cCCCceEEccccccccc
Q 048668 616 MGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL--DHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 616 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill--~~~~~~kl~Dfgla~~~ 693 (725)
+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+|+.+
T Consensus 168 ~~~~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~ 239 (373)
T 2x4f_A 168 VDGGELFDRIIDES-----YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239 (373)
T ss_dssp CTTCEEHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred CCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence 99999999987543 2589999999999999999999999 99999999999999 56789999999999876
Q ss_pred ccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 694 SSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
..... ....+||+.|+|||++
T Consensus 240 ~~~~~---------~~~~~gt~~y~aPE~~ 260 (373)
T 2x4f_A 240 KPREK---------LKVNFGTPEFLAPEVV 260 (373)
T ss_dssp CTTCB---------CCCCCSSCTTCCHHHH
T ss_pred CCccc---------cccccCCCcEeChhhc
Confidence 43311 1124699999999975
No 127
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=4.6e-29 Score=258.26 Aligned_cols=175 Identities=31% Similarity=0.491 Sum_probs=138.8
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
....+|++.+.||+|+||.||+|++ +++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---- 107 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP---- 107 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT----
T ss_pred CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----
Confidence 3456788899999999999999987 57889999997543 234567899999999999999999999976554
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeecCCCceEE
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHDMVAHV 684 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivHrdlkp~Nill~~~~~~kl 684 (725)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||
T Consensus 108 -~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL 180 (309)
T 3p86_A 108 -NLSIVTEYLSRGSLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKV 180 (309)
T ss_dssp -CCEEEEECCTTCBHHHHHHSTTH---HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEE
T ss_pred -ceEEEEecCCCCcHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEE
Confidence 68999999999999999986542 12489999999999999999999998 7 999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+....... ......||+.|+|||++.
T Consensus 181 ~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~ 212 (309)
T 3p86_A 181 CDFGLSRLKASTFL--------SSKSAAGTPEWMAPEVLR 212 (309)
T ss_dssp CCCC-------------------------CCTTSCHHHHT
T ss_pred CCCCCCcccccccc--------ccccCCCCccccChhhhc
Confidence 99999976433211 112356999999999863
No 128
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.7e-28 Score=255.85 Aligned_cols=226 Identities=22% Similarity=0.249 Sum_probs=150.8
Q ss_pred ccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeec
Q 048668 13 FKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYL 92 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 92 (725)
.++++|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..|+.+++|++|+|++|+++ .+|..|.++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 56777777777777 66777777777777777777777 66777777777777777777777 56777777777777777
Q ss_pred cCCCCCCCCChhhh--------cCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeee
Q 048668 93 TSNRFSGSLPFDIV--------VNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLN 164 (725)
Q Consensus 93 ~~N~l~~~~~~~~~--------~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~ 164 (725)
++|.+.+.+|..+. .++++|++|+|++|+++ .+|..+..+++|++|+|++|+++++++ .|.
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~-~l~--------- 226 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGP-AIH--------- 226 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCG-GGG---------
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCch-hhc---------
Confidence 77766666665441 23555555555555555 334445555555555555555554333 244
Q ss_pred cCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEe
Q 048668 165 LEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAV 244 (725)
Q Consensus 165 L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 244 (725)
++++|++|+|++|++.+.+|..+..++ +|+.|++++|.+.+.+|..+.++++|++|+|
T Consensus 227 ---------------------~l~~L~~L~Ls~n~~~~~~p~~~~~l~-~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 284 (328)
T 4fcg_A 227 ---------------------HLPKLEELDLRGCTALRNYPPIFGGRA-PLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284 (328)
T ss_dssp ---------------------GCTTCCEEECTTCTTCCBCCCCTTCCC-CCCEEECTTCTTCCBCCTTGGGCTTCCEEEC
T ss_pred ---------------------cCCCCCEEECcCCcchhhhHHHhcCCC-CCCEEECCCCCchhhcchhhhcCCCCCEEeC
Confidence 445555555555555555555555554 5555555555555567777777888888888
Q ss_pred cccccCCCCChhhcCCCCccEEeccCcccc
Q 048668 245 EVNQLHGTIPDVIGELKNLQLLGLYKNFLQ 274 (725)
Q Consensus 245 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 274 (725)
++|++.+.+|..+..+++|+.+++..+.+.
T Consensus 285 ~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 285 RGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 888888888888888888888888877665
No 129
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.96 E-value=1.5e-29 Score=262.64 Aligned_cols=178 Identities=20% Similarity=0.378 Sum_probs=141.6
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 357899999999999999999999999999999997542 233467899999999999999999999876543 1122
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++||+|.++++... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred ccEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 4599999999999999998654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+.+...... .......+||+.|+|||++
T Consensus 161 g~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~ 191 (311)
T 3ork_A 161 GIARAIADSGNS-----VTQTAAVIGTAQYLSPEQA 191 (311)
T ss_dssp SCC-----------------------CCTTCCHHHH
T ss_pred cCcccccccccc-----cccccccCcCcccCCHHHh
Confidence 999876443211 1112235699999999976
No 130
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.96 E-value=9.6e-29 Score=252.08 Aligned_cols=170 Identities=27% Similarity=0.349 Sum_probs=149.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++..++..||+|++........+++.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-----DIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----eEE
Confidence 457899999999999999999999999999999998765566788999999999999999999999986554 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---cCCCceEEccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDF 687 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill---~~~~~~kl~Df 687 (725)
+||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 83 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHKR------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp EEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 9999999999999987654 589999999999999999999999 99999999999999 78889999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+....... .....||+.|+|||++
T Consensus 154 g~~~~~~~~~~---------~~~~~~t~~y~aPE~~ 180 (277)
T 3f3z_A 154 GLAARFKPGKM---------MRTKVGTPYYVSPQVL 180 (277)
T ss_dssp TTCEECCTTSC---------BCCCCSCTTTCCHHHH
T ss_pred ccceeccCccc---------hhccCCCCCccChHHh
Confidence 99987643211 1124699999999975
No 131
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96 E-value=8e-29 Score=258.16 Aligned_cols=174 Identities=26% Similarity=0.430 Sum_probs=147.8
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---CceEE
Confidence 57889999999999999999999999999999997543 334577889999999999999999999876543 23678
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----cCCCceEEcc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DHDMVAHVGD 686 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill----~~~~~~kl~D 686 (725)
+||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 86 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred EEEeCCCCCCHHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 99999999999999986532 12389999999999999999999999 99999999999999 7788899999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+....... ....+||+.|+|||++
T Consensus 160 fg~a~~~~~~~~---------~~~~~gt~~y~aPE~~ 187 (319)
T 4euu_A 160 FGAARELEDDEQ---------FVSLYGTEEYLHPDMY 187 (319)
T ss_dssp CTTCEECCTTCC---------BCCCCSCGGGCCHHHH
T ss_pred CCCceecCCCCc---------eeecccCCCccCHHHh
Confidence 999987643311 1125699999999975
No 132
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.96 E-value=9.3e-29 Score=265.14 Aligned_cols=182 Identities=18% Similarity=0.193 Sum_probs=151.4
Q ss_pred HhcCCCCCcccccc--cceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 530 ATSEFSSSNMIGQG--SFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 530 ~~~~~~~~~~ig~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
..++|++.+.||+| +||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 99 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--- 99 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC---
Confidence 34579999999999 99999999999999999999997653 334567889999999999999999999987654
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
..|+|||||++|+|.+++...... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 170 (389)
T 3gni_B 100 --ELWVVTSFMAYGSAKDLICTHFMD----GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLS 170 (389)
T ss_dssp --EEEEEEECCTTCBHHHHHHHTCTT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred --EEEEEEEccCCCCHHHHHhhhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEc
Confidence 789999999999999999865321 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||.+............ ........+||+.|+|||++.
T Consensus 171 dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~ 208 (389)
T 3gni_B 171 GLRSNLSMISHGQRQRV-VHDFPKYSVKVLPWLSPEVLQ 208 (389)
T ss_dssp CGGGCEECEETTEECSC-BCCCCTTCTTTGGGSCHHHHS
T ss_pred ccccceeeccccccccc-cccccccccccccccCHHHHh
Confidence 99998765432211111 111122347999999999864
No 133
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=8.3e-30 Score=280.34 Aligned_cols=216 Identities=18% Similarity=0.155 Sum_probs=127.3
Q ss_pred CCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEe
Q 048668 188 SSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLG 267 (725)
Q Consensus 188 ~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 267 (725)
++|++|+|++|.+++..|..|..++ .|+.|++++|.+++..| +..+++|++|+|++|.|+++.+ .++|++|+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3555566665555544444454444 45555555555544433 5566666666666666654332 25666666
Q ss_pred ccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhh-cCCC
Q 048668 268 LYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVG-NLKN 346 (725)
Q Consensus 268 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~-~l~~ 346 (725)
+++|.+.+..+.. +++|+.|++++|.+++ ..|..+..+..+ ++|+|++|.+++..|..+. .+++
T Consensus 106 L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~-----------~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~ 170 (487)
T 3oja_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITM-----------LRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDT 170 (487)
T ss_dssp CCSSCCCCEEECC---CSSCEEEECCSSCCCS-----------GGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTT
T ss_pred CcCCcCCCCCccc---cCCCCEEECCCCCCCC-----------CCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCc
Confidence 6666666544432 3556666666665542 223333333333 5666666666665565554 5677
Q ss_pred CCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEccc
Q 048668 347 LIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSY 426 (725)
Q Consensus 347 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 426 (725)
|+.|+|++|.|++..+ +..+++|++|+|++|.+++. |+.|..+++|+.|+|++|.|++ +|..+..+++|+.|++++
T Consensus 171 L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~ 246 (487)
T 3oja_A 171 LEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRG 246 (487)
T ss_dssp CCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTT
T ss_pred ccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCC
Confidence 7777777777765522 23466777777777777753 3346677777777777777764 455566677777777777
Q ss_pred ccCe
Q 048668 427 NHLE 430 (725)
Q Consensus 427 N~l~ 430 (725)
|++.
T Consensus 247 N~l~ 250 (487)
T 3oja_A 247 NGFH 250 (487)
T ss_dssp CCBC
T ss_pred CCCc
Confidence 7776
No 134
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96 E-value=8.9e-29 Score=256.56 Aligned_cols=171 Identities=28% Similarity=0.432 Sum_probs=142.6
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-----C 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-----C
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-----E
Confidence 467999999999999999999996 58999999997543 233567889999999999999999999976544 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.++||||+++ ++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENKT-----GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEcCCCC-CHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCc
Confidence 8999999975 88888876542 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+....... .....+||+.|+|||++.
T Consensus 165 ~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 192 (311)
T 3niz_A 165 LARAFGIPVR--------SYTHEVVTLWYRAPDVLM 192 (311)
T ss_dssp TCEETTSCCC-----------CCCCCCTTCCHHHHT
T ss_pred CceecCCCcc--------cccCCcccCCcCCHHHhc
Confidence 9987643211 112246899999999863
No 135
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.96 E-value=2.9e-29 Score=267.48 Aligned_cols=175 Identities=25% Similarity=0.425 Sum_probs=146.2
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
..++|+..+.||+|+||.||+|++..+++.||||+++... ....++|.+|++++++++||||+++++++.... .
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----P 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS-----S
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC-----C
Confidence 3467888999999999999999999899999999987542 223457889999999999999999999986544 6
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+++|+|.++++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG 258 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFG 258 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred cEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCC
Confidence 8999999999999999975432 588999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+.......... .....+++.|+|||++
T Consensus 259 ~s~~~~~~~~~~~------~~~~~~~~~y~aPE~~ 287 (377)
T 3cbl_A 259 MSREEADGVYAAS------GGLRQVPVKWTAPEAL 287 (377)
T ss_dssp GCEECTTSEEECC------SSCCEEEGGGSCHHHH
T ss_pred CceecCCCceeec------CCCCCCCcCcCCHhHh
Confidence 9986533211110 0112367889999975
No 136
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=5e-29 Score=259.87 Aligned_cols=178 Identities=28% Similarity=0.381 Sum_probs=146.0
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..++|+..+.||+|+||.||+|++. ++.||||++..... ....+.+|+.++++++||||+++++++..... .....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~~ 97 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTS-VDVDL 97 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEE
T ss_pred chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCC-CCceE
Confidence 3468999999999999999999985 78999999965432 33456679999999999999999999876541 12357
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhc-------CCCCcEecCCCCCCeeecCCCce
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH-------CQPPMVHGDLKPSNVLLDHDMVA 682 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-------~~~~ivHrdlkp~Nill~~~~~~ 682 (725)
|+||||+++|+|.++++.. .+++..++.++.|++.||+|||+. +.++|+||||||+||+++.++.+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 9999999999999999754 488999999999999999999975 23489999999999999999999
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+........ ......+||+.|+|||++.
T Consensus 171 kL~DFg~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~ 206 (322)
T 3soc_A 171 CIADFGLALKFEAGKSA------GDTHGQVGTRRYMAPEVLE 206 (322)
T ss_dssp EECCCTTCEEECTTSCC------CCCTTCCCCGGGCCHHHHT
T ss_pred EEccCCcccccccccCc------cccccCccCccccCHhhcc
Confidence 99999999876543221 1122357999999999863
No 137
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=5.6e-29 Score=264.49 Aligned_cols=175 Identities=28% Similarity=0.524 Sum_probs=135.5
Q ss_pred hcCCCCCcccccccceEEEEEEEC---CCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||.||+|++. .++..||||+++... ....++|.+|++++++++||||+++++++....
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 119 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK---- 119 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----
Confidence 357899999999999999999876 467789999997543 334568999999999999999999999976544
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||+++|+|.++++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 120 -~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 190 (373)
T 2qol_A 120 -PVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190 (373)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred -ceEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECc
Confidence 78999999999999999986542 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+......... .......+|+.|+|||++
T Consensus 191 fg~a~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 222 (373)
T 2qol_A 191 FGLGRVLEDDPEAA-----YTTRGGKIPIRWTSPEAI 222 (373)
T ss_dssp C---------------------------CTTSCHHHH
T ss_pred CccccccccCCccc-----eeccCCCcCCCccChhhh
Confidence 99998764332111 111123467899999975
No 138
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=5.5e-31 Score=299.18 Aligned_cols=406 Identities=13% Similarity=0.057 Sum_probs=287.5
Q ss_pred ccCcccCcEEecCCCccC---ccCCcccc------------CCCCCcEEEccCCcCCccCCCCCCCC--CCCCEEEccCC
Q 048668 9 IGSLFKLQALALAGNYLT---GKLPDFIG------------NLSALQVIHIKGNSLGGKFPTTLGLL--RNLVQLNVAEN 71 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~---~~~~~~~~------------~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~N 71 (725)
+..+++|++|+|+++... +.+|..++ .+++|++|+|++|.+++..+..+... .+|++|+|++|
T Consensus 69 ~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~ 148 (592)
T 3ogk_B 69 SRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKC 148 (592)
T ss_dssp HHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESC
T ss_pred HHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCC
Confidence 456778999999886421 23443333 78899999999999887666666553 45999999998
Q ss_pred c-ccc-cCcccccccCCCceeeccCCCCCCCCC---hhhhcCCCCccEEEccCceeee----eCCCcccccCccceecCC
Q 048668 72 K-FYG-MFPRSICNISSLEYFYLTSNRFSGSLP---FDIVVNLPNLKELGIGANNFFG----LIPDSLSNASNLELLDLS 142 (725)
Q Consensus 72 ~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~Ls 142 (725)
. ++. ..+....++++|++|+|++|.+++.-. ...+..+++|++|+|++|.+++ ..+..+.++++|++|+|+
T Consensus 149 ~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~ 228 (592)
T 3ogk_B 149 SGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVG 228 (592)
T ss_dssp EEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECS
T ss_pred CCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEecc
Confidence 7 321 123334578999999999999874321 1245678999999999999873 334445678999999999
Q ss_pred CccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecC
Q 048668 143 NNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGG 222 (725)
Q Consensus 143 ~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~ 222 (725)
+|.+.+++ ..+..+++|++|+++.+....... .....+..+++|+.|+++++... .+|..+..++ +|+.|++++
T Consensus 229 ~~~~~~l~-~~~~~~~~L~~L~l~~~~~~~~~~---~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~-~L~~L~Ls~ 302 (592)
T 3ogk_B 229 DFEILELV-GFFKAAANLEEFCGGSLNEDIGMP---EKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAA-QIRKLDLLY 302 (592)
T ss_dssp SCBGGGGH-HHHHHCTTCCEEEECBCCCCTTCT---TSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGG-GCCEEEETT
T ss_pred CccHHHHH-HHHhhhhHHHhhcccccccccchH---HHHHHhhccccccccCccccchh-HHHHHHhhcC-CCcEEecCC
Confidence 99998754 678889999999998644321111 12245677889999999886544 5677676666 899999999
Q ss_pred ccceeccC-cccccccCCceEEecccccC-CCCChhhcCCCCccEEecc-----------CcccccC-CCCCCcCCCCCC
Q 048668 223 NQISGTIP-LGIRNLVNLIALAVEVNQLH-GTIPDVIGELKNLQLLGLY-----------KNFLQGS-IPSGLGNLTKLA 288 (725)
Q Consensus 223 n~i~~~~~-~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~-----------~N~l~~~-~~~~~~~l~~L~ 288 (725)
|.+.+... ..+..+++|++|+++ +.+. +..+..+..+++|++|+++ .|.+++. ++.....+++|+
T Consensus 303 ~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 381 (592)
T 3ogk_B 303 ALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELE 381 (592)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCS
T ss_pred CcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCe
Confidence 98765443 346788999999998 4443 3345555778899999999 3555532 222234578999
Q ss_pred EEeCCCCcCCCccccccccccccccccccccccccceeccc----CCccCCC-----cchhhhcCCCCCeEEccCc--cc
Q 048668 289 KLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLS----NNLLNGS-----LPQQVGNLKNLIILDISSN--QF 357 (725)
Q Consensus 289 ~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~----~n~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l 357 (725)
+|+++.|.+++ ..+..+....+.++.|+++ .|.+++. ++..+.++++|+.|+++++ .+
T Consensus 382 ~L~l~~~~l~~-----------~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 382 YMAVYVSDITN-----------ESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp EEEEEESCCCH-----------HHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGC
T ss_pred EEEeecCCccH-----------HHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCc
Confidence 99998886653 2333333312233788885 6778764 4445777999999999753 46
Q ss_pred cccCcccccc-ccCCcEEEccCCccccc-cCccccCCCCCCEEeCCCCccccc-CcccccCCCCCCeEEcccccCeee
Q 048668 358 SGMIPVTLST-CVSLEYVDISSNCFHGI-IPPSLGFLKSIKFLDVSCNNFSGQ-FPKFLENLSFLEFLNLSYNHLEGE 432 (725)
Q Consensus 358 ~~~~~~~~~~-l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~ 432 (725)
++..+..+.. +++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|+++..
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 6655555544 78899999999998863 344457889999999999998754 444456788999999999998643
No 139
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=3.6e-29 Score=265.53 Aligned_cols=189 Identities=21% Similarity=0.338 Sum_probs=152.8
Q ss_pred cCHHHHHHHhcCCCCCcccccccceEEEEEE-----ECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCcccce
Q 048668 522 VSYAELSKATSEFSSSNMIGQGSFGSVYKGI-----LGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKI 594 (725)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l 594 (725)
++...+....++|+..+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 3455666677899999999999999999998 55677999999997543 33456799999999999 79999999
Q ss_pred eeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCcc------------------------------------------
Q 048668 595 ITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQV------------------------------------------ 632 (725)
Q Consensus 595 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------------------------------------------ 632 (725)
++++.... ...++||||+++|+|.++++......
T Consensus 92 ~~~~~~~~----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 92 LGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp EEEECSTT----SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeecCC----CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 99986544 35799999999999999998654210
Q ss_pred ------------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccccccc
Q 048668 633 ------------------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLS 694 (725)
Q Consensus 633 ------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~~ 694 (725)
....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 011288999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 695 SHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
..... .......||+.|+|||++
T Consensus 245 ~~~~~------~~~~~~~~t~~y~aPE~~ 267 (359)
T 3vhe_A 245 KDPDY------VRKGDARLPLKWMAPETI 267 (359)
T ss_dssp SCTTC------EEC--CEECGGGCCHHHH
T ss_pred ccccc------hhccccCCCceeEChhhh
Confidence 32111 112235689999999975
No 140
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.96 E-value=1.5e-28 Score=256.37 Aligned_cols=162 Identities=25% Similarity=0.350 Sum_probs=125.9
Q ss_pred CcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCCCCcceeeEEEec
Q 048668 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDFKGVDFKALVFEY 615 (725)
Q Consensus 537 ~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~ 615 (725)
.+.||+|+||.||+|++..+++.||||++... ....+.+|+++++++. ||||+++++++.... ..|+||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-----~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL-----HTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----EEEEEEEc
Confidence 47899999999999999999999999999643 3456789999999997 999999999986554 78999999
Q ss_pred cCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC---ceEEcccccccc
Q 048668 616 MGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVGDFGLAKF 692 (725)
Q Consensus 616 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~---~~kl~Dfgla~~ 692 (725)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+|+.
T Consensus 88 ~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 88 LNGGELFERIKKKK------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp CCSCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 99999999998654 589999999999999999999999 999999999999998765 899999999986
Q ss_pred cccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 693 LSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
...... .....+||+.|+|||++
T Consensus 159 ~~~~~~--------~~~~~~~t~~y~aPE~~ 181 (325)
T 3kn6_A 159 KPPDNQ--------PLKTPCFTLHYAAPELL 181 (325)
T ss_dssp CCC----------------------------
T ss_pred cCCCCC--------cccccCCCcCccCHHHh
Confidence 543211 11235689999999986
No 141
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.3e-29 Score=261.61 Aligned_cols=258 Identities=16% Similarity=0.167 Sum_probs=138.1
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
++.++++++.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4445555555543333444455555555555555555555555555555555555555554333 55555555555555
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccC
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGA 174 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~ 174 (725)
|+|+ .++ ..++|++|++++|+++++.+.. +++|++|+|++|+|+++.+..|..+++|++|++++|.++...
T Consensus 90 n~l~-~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 90 NYVQ-ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SEEE-EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred Cccc-ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 5555 333 1255555555555555554333 344555555555555555555555555555555555555433
Q ss_pred CCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCC
Q 048668 175 ANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIP 254 (725)
Q Consensus 175 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 254 (725)
+. .....+++|++|+|++|++++. |.. ..++ .|+.|++++|.+++. |..+..+++|++|+|++|++++ +|
T Consensus 161 ~~-----~~~~~l~~L~~L~L~~N~l~~~-~~~-~~l~-~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~-l~ 230 (317)
T 3o53_A 161 FA-----ELAASSDTLEHLNLQYNFIYDV-KGQ-VVFA-KLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IE 230 (317)
T ss_dssp GG-----GGGGGTTTCCEEECTTSCCCEE-ECC-CCCT-TCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-EC
T ss_pred HH-----HHhhccCcCCEEECCCCcCccc-ccc-cccc-cCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccc-hh
Confidence 21 1122455555555555555533 211 1122 555555555555533 3335566666666666666663 34
Q ss_pred hhhcCCCCccEEeccCcccc-cCCCCCCcCCCCCCEEeCC
Q 048668 255 DVIGELKNLQLLGLYKNFLQ-GSIPSGLGNLTKLAKLDLG 293 (725)
Q Consensus 255 ~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~ 293 (725)
..+..+++|++|++++|.+. +.+|..+..+++|+.++++
T Consensus 231 ~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred hHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 45566666666666666665 4555555666666666665
No 142
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.1e-28 Score=255.86 Aligned_cols=170 Identities=25% Similarity=0.272 Sum_probs=141.1
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCcce
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 608 (725)
++|+..+.||+|+||+||+|++..+++.||||++.... .....++..|+..+.++ +||||++++++|.... .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~-----~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG-----I 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC-----E
Confidence 57999999999999999999999999999999986542 22334556677666665 8999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGA-----SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred EEEEEecc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 89999999 6799999876542 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+....... .....||++|+|||++.
T Consensus 203 ~a~~~~~~~~---------~~~~~gt~~y~aPE~~~ 229 (311)
T 3p1a_A 203 LLVELGTAGA---------GEVQEGDPRYMAPELLQ 229 (311)
T ss_dssp TCEECC---------------CCCCCGGGCCGGGGG
T ss_pred eeeecccCCC---------CcccCCCccccCHhHhc
Confidence 9986643211 11246999999999863
No 143
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.95 E-value=9.6e-29 Score=266.98 Aligned_cols=171 Identities=27% Similarity=0.381 Sum_probs=138.9
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--------chHHHHHHHHHHHHcCCCCcccceeeEeecC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------GAFRSFVAECEALRNIRHRNLIKIITICSST 601 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 601 (725)
..++|...+.||+|+||.||+|+++.+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 45689999999999999999999999999999999975421 1123578999999999999999999986432
Q ss_pred CCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC--
Q 048668 602 DFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD-- 679 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~-- 679 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 213 ------~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~ 277 (419)
T 3i6u_A 213 ------DYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 277 (419)
T ss_dssp ------EEEEEEECCTTCBGGGGTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSS
T ss_pred ------ceEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCC
Confidence 4789999999999999987654 589999999999999999999999 99999999999999754
Q ss_pred -CceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 680 -MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 680 -~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+.+||+|||+|+...... .....+||+.|||||++.
T Consensus 278 ~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 314 (419)
T 3i6u_A 278 DCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLV 314 (419)
T ss_dssp SCCEEECCSSTTTSCC--------------------CTTCCTTTTC
T ss_pred cceEEEeecccceecCCCc---------cccccCCCCCccCceeee
Confidence 459999999998764321 112357999999999863
No 144
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.7e-28 Score=251.41 Aligned_cols=225 Identities=18% Similarity=0.238 Sum_probs=179.5
Q ss_pred CCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEe
Q 048668 188 SSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLG 267 (725)
Q Consensus 188 ~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 267 (725)
++++.|+|++|.++ .+|..++.++ .|+.|++++|.++ .+|..+..+++|++|+|++|++. .+|..+..+++|++|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~-~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLS-HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGT-TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCC-CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 55666666666666 5566666655 6666666666666 66777777777777777777777 5566777777777777
Q ss_pred ccCcccccCCCCCCcC---------CCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcc
Q 048668 268 LYKNFLQGSIPSGLGN---------LTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLP 338 (725)
Q Consensus 268 L~~N~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~ 338 (725)
+++|.+.+.+|..+.. +++|++|++++|+++ .+|..+..+..+ ++|++++|.+++ +|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~------------~lp~~l~~l~~L-~~L~L~~N~l~~-l~ 222 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR------------SLPASIANLQNL-KSLKIRNSPLSA-LG 222 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC------------CCCGGGGGCTTC-CEEEEESSCCCC-CC
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC------------cchHhhcCCCCC-CEEEccCCCCCc-Cc
Confidence 7777777777766654 788888888888666 667666666665 788888888885 55
Q ss_pred hhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCC
Q 048668 339 QQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSF 418 (725)
Q Consensus 339 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 418 (725)
..+..+++|++|+|++|.+.+.+|..+..+++|++|+|++|.+.+.+|..++.+++|+.|+|++|++.+.+|..+..+++
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred hhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccC
Confidence 67889999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CCeEEcccccCe
Q 048668 419 LEFLNLSYNHLE 430 (725)
Q Consensus 419 L~~L~l~~N~l~ 430 (725)
|+.+++..|.+.
T Consensus 303 L~~l~l~~~~~~ 314 (328)
T 4fcg_A 303 NCIILVPPHLQA 314 (328)
T ss_dssp TCEEECCGGGSC
T ss_pred ceEEeCCHHHHH
Confidence 999999988765
No 145
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.95 E-value=8.9e-29 Score=260.69 Aligned_cols=169 Identities=27% Similarity=0.387 Sum_probs=131.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.+.|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++.... ..+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~ 124 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT-----EIS 124 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-----eEE
Confidence 457899999999999999999999999999999997543 3356789999999999999999999986554 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC---CCceEEccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVGDF 687 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~---~~~~kl~Df 687 (725)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 125 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp EEECCCCSCBHHHHHTTCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 9999999999999997654 589999999999999999999999 9999999999999975 789999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+++...... .....+||+.|+|||++.
T Consensus 196 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 223 (349)
T 2w4o_A 196 GLSKIVEHQV---------LMKTVCGTPGYCAPEILR 223 (349)
T ss_dssp C-------------------------CGGGSCHHHHT
T ss_pred ccccccCccc---------ccccccCCCCccCHHHhc
Confidence 9998654321 112356999999999863
No 146
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=1.9e-28 Score=254.99 Aligned_cols=177 Identities=26% Similarity=0.374 Sum_probs=142.2
Q ss_pred cCCCCC-cccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCccee
Q 048668 532 SEFSSS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 532 ~~~~~~-~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
+.|++. +.||+|+||.||+|++..+++.||||++........+++.+|++++.++ +||||+++++++.... ..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~-----~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED-----RF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-----EE
Confidence 467764 7899999999999999989999999999866555667899999999985 7999999999987654 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc---eEEcc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---AHVGD 686 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~---~kl~D 686 (725)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRR------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred EEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEE
Confidence 99999999999999998654 588999999999999999999999 9999999999999998775 99999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+++........... ........+||+.|+|||++
T Consensus 158 fg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~ 193 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPI-STPELLTPCGSAEYMAPEVV 193 (316)
T ss_dssp TTCCC--------------------CCSGGGCCHHHH
T ss_pred ccCccccccCCccccc-cccccccccCCcCccChHHh
Confidence 9999865432111110 11112235699999999975
No 147
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.95 E-value=5.3e-29 Score=260.84 Aligned_cols=172 Identities=27% Similarity=0.440 Sum_probs=147.7
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--------chHHHHHHHHHHHHcCCCCcccceeeEeecC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------GAFRSFVAECEALRNIRHRNLIKIITICSST 601 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 601 (725)
..++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45689999999999999999999999999999999975421 1234577899999999999999999998655
Q ss_pred CCCCcceeeEEEeccCCC-CHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC
Q 048668 602 DFKGVDFKALVFEYMGNG-SLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 680 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~ 680 (725)
. ..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 102 ~-----~~~lv~e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 102 G-----FFQLVMEKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp S-----EEEEEEECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTS
T ss_pred C-----EEEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCC
Confidence 4 789999999777 9999998654 589999999999999999999999 999999999999999999
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.+||+|||+|+...... .....+||+.|+|||++.
T Consensus 168 ~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 202 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGK---------LFYTFCGTIEYCAPEVLM 202 (335)
T ss_dssp CEEECCCTTCEECCTTC---------CBCEECSCGGGCCHHHHT
T ss_pred cEEEeecccceECCCCC---------ceeccCCCccccChhhhc
Confidence 99999999998764321 112357999999999863
No 148
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.95 E-value=1.1e-28 Score=269.46 Aligned_cols=173 Identities=22% Similarity=0.294 Sum_probs=140.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCC-CCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDF-KGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 607 (725)
.++|+..+.||+|+||+||+|++..+++.||||++... .....+++.+|+++++.++||||+++++++..... +...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46799999999999999999999999999999999754 23345778899999999999999999999865432 3345
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEE
Confidence 68999999976 57776642 378899999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+...... .....+||++|+|||++.
T Consensus 209 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 236 (464)
T 3ttj_A 209 GLARTAGTSF---------MMTPYVVTRYYRAPEVIL 236 (464)
T ss_dssp CCC-----CC---------CC----CCCTTCCHHHHT
T ss_pred EeeeecCCCc---------ccCCCcccccccCHHHHc
Confidence 9998654321 112357999999999864
No 149
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.95 E-value=6.8e-29 Score=263.80 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=143.4
Q ss_pred HhcCCCCCcccccccceEEEEEE-----ECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC---CCcccceeeEeecC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGI-----LGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR---HRNLIKIITICSST 601 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 601 (725)
..++|...+.||+|+||.||+|+ +..+++.||||++... ...++.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678889999999999999994 5668899999999644 3456778888888887 99999999998765
Q ss_pred CCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC---
Q 048668 602 DFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH--- 678 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~--- 678 (725)
+ ..|+|||||++|+|.+++...... ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.
T Consensus 140 ~-----~~~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~ 210 (365)
T 3e7e_A 140 N-----GSVLVGELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFL 210 (365)
T ss_dssp S-----CEEEEECCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGT
T ss_pred C-----CcEEEEeccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEeccccc
Confidence 5 789999999999999999753211 112589999999999999999999998 9999999999999998
Q ss_pred --------CCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 679 --------DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 679 --------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
++.+||+|||+|+.+..... .......+||++|||||++.
T Consensus 211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~ 258 (365)
T 3e7e_A 211 EQDDEDDLSAGLALIDLGQSIDMKLFPK------GTIFTAKCETSGFQCVEMLS 258 (365)
T ss_dssp CC------CTTEEECCCTTCEEGGGSCT------TEEECCSSCTTSCCCHHHHT
T ss_pred CccccccccCCEEEeeCchhhhhhccCC------CceeeeecCCCCCCChHHhc
Confidence 89999999999976542211 11223467999999999864
No 150
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.95 E-value=1.4e-28 Score=254.07 Aligned_cols=174 Identities=26% Similarity=0.411 Sum_probs=141.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHc--CCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.... .....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCce
Confidence 46899999999999999999998 6889999998644 23455667777666 78999999999876532 33456
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeeecCCC
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLLDHDM 680 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~~~~ivHrdlkp~Nill~~~~ 680 (725)
.|+||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTS
T ss_pred eEEehhhccCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCC
Confidence 89999999999999999643 4899999999999999999999 66 999999999999999999
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.+||+|||+|+......... .......+||+.|+|||++.
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~ 190 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQL----DVGNNPRVGTKRYMAPEVLD 190 (301)
T ss_dssp CEEECCCTTCEEEETTTTEE----ECCCCCCCCCGGGCCHHHHT
T ss_pred CEEEeeCCCeeecccccccc----cccccccccccceeChhhhc
Confidence 99999999998764432111 01112347999999999863
No 151
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.95 E-value=1.2e-28 Score=258.11 Aligned_cols=177 Identities=24% Similarity=0.351 Sum_probs=146.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.++|+..+.||+|+||.||+|++..+++.||||++..... .+++.+|+++++++ +||||+++++++.... ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-----~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-----YN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-----EE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-----cc
Confidence 3578999999999999999999999999999999875432 24678999999999 8999999999977654 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc-----eEE
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-----AHV 684 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~-----~kl 684 (725)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl 151 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDR-----TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHI 151 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEE
T ss_pred EEEEEeC-CCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEE
Confidence 9999999 9999999986532 589999999999999999999999 9999999999999998887 999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+.+......... ........+||+.|+|||++.
T Consensus 152 ~DFg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~ 190 (330)
T 2izr_A 152 IDFALAKEYIDPETKKHI-PYREHKSLTGTARYMSINTHL 190 (330)
T ss_dssp CCCTTCEESBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHT
T ss_pred EEcccceeeecCCCCccc-cccccCCcCCCccccChHHHc
Confidence 999999876543221110 111123467999999999863
No 152
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.8e-29 Score=264.00 Aligned_cols=179 Identities=24% Similarity=0.427 Sum_probs=144.5
Q ss_pred hcCCCCCcccccccceEEEEEEE-----CCCceEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
.++|+..+.||+|+||.||+|++ ..+++.||||++... ......++.+|+.++++++||||+++++++....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 35788899999999999999994 456789999999644 2334567899999999999999999999976544
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCcc-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC---
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM--- 680 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~--- 680 (725)
..|+||||+++|+|.+++....... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 148 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 148 ---PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred ---CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 6799999999999999998654211 123589999999999999999999999 999999999999999555
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
.+||+|||+|+.+....... ......||+.|+|||++
T Consensus 222 ~~kL~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~ 258 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAGYYR------KGGCAMLPVKWMPPEAF 258 (367)
T ss_dssp CEEECCCHHHHHHHHHSSCT------TCCGGGSCGGGCCHHHH
T ss_pred eEEECCCccccccccccccc------cCCCcCCcccEECHHHh
Confidence 59999999998664332111 11225689999999975
No 153
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.95 E-value=1.8e-28 Score=254.13 Aligned_cols=177 Identities=28% Similarity=0.438 Sum_probs=145.3
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-----cchHHHHHHHHHHHHcCC---CCcccceeeEeecC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-----KGAFRSFVAECEALRNIR---HRNLIKIITICSST 601 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 601 (725)
..++|+..+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4568999999999999999999999999999999997532 122356677888777765 99999999998776
Q ss_pred CCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc
Q 048668 602 DFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 681 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~ 681 (725)
........++||||++ |+|.+++...... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP----GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 5444446899999996 5999999876421 489999999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||+|+...... .....+||+.|+|||++
T Consensus 159 ~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~ 191 (308)
T 3g33_A 159 VKLADFGLARIYSYQM---------ALTPVVVTLWYRAPEVL 191 (308)
T ss_dssp EEECSCSCTTTSTTCC---------CSGGGGCCCSSCCHHHH
T ss_pred EEEeeCccccccCCCc---------ccCCccccccccCchHH
Confidence 9999999998653221 11235799999999986
No 154
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.95 E-value=9.4e-29 Score=253.63 Aligned_cols=170 Identities=25% Similarity=0.431 Sum_probs=141.6
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
++|+..+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-----RL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-----CE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-----eE
Confidence 4788899999999999999998 578999999997543 233477889999999999999999999976554 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++ +|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred EEEEEecCC-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 999999975 99999876532 588999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+....... ......||+.|+|||++.
T Consensus 147 ~~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 173 (288)
T 1ob3_A 147 ARAFGIPVR--------KYTHEIVTLWYRAPDVLM 173 (288)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHT
T ss_pred ccccCcccc--------ccccccccccccCchhee
Confidence 986543211 111246899999999863
No 155
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=1.6e-28 Score=249.25 Aligned_cols=171 Identities=30% Similarity=0.510 Sum_probs=145.1
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++. +++.||+|++..... ..+++.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----ceE
Confidence 457888999999999999999987 577899999975433 3467899999999999999999999976544 689
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 153 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 153 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEEeCCCCcHHHHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccc
Confidence 99999999999999976542 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+........ ......||+.|+|||++
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 179 (269)
T 4hcu_A 154 RFVLDDQYT-------SSTGTKFPVKWASPEVF 179 (269)
T ss_dssp GGBCCHHHH-------STTSTTCCGGGCCHHHH
T ss_pred ccccccccc-------cccCcccccccCCHHHh
Confidence 866432211 11124578899999975
No 156
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.95 E-value=1.6e-28 Score=279.79 Aligned_cols=173 Identities=23% Similarity=0.318 Sum_probs=148.5
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 605 (725)
..++|+..+.||+|+||+||+|+++.+++.||||+++.. .....+.+..|.++++.+ +||+|+++++++...
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~---- 414 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM---- 414 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC----
Confidence 456899999999999999999999999999999999753 234457788999999988 699999999985443
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
+..|+||||++||+|.++++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 415 -~~~~lV~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 415 -DRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred -CEEEEEEeCcCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 48999999999999999998654 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||+|+...... ......+||+.|||||++.
T Consensus 485 DFGla~~~~~~~--------~~~~~~~GT~~Y~APE~l~ 515 (674)
T 3pfq_A 485 DFGMCKENIWDG--------VTTKTFCGTPDYIAPEIIA 515 (674)
T ss_dssp CCTTCEECCCTT--------CCBCCCCSCSSSCCHHHHT
T ss_pred ecceeeccccCC--------cccccccCCCcccCHhhhc
Confidence 999998643221 1123468999999999864
No 157
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.95 E-value=2.4e-28 Score=254.68 Aligned_cols=170 Identities=26% Similarity=0.349 Sum_probs=147.2
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc------chHHHHHHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------GAFRSFVAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
.+.|+..+.||+|+||.||+|++..+++.||+|++..... ...+++.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 3568899999999999999999999999999999975432 13578999999999999999999999976554
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC----
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM---- 680 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~---- 680 (725)
..|+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 89 ---DVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp ---EEEEEECCCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred ---EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcC
Confidence 7899999999999999997643 578999999999999999999999 999999999999999887
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
.+||+|||+++....... .....||+.|+|||++
T Consensus 157 ~~kl~Dfg~~~~~~~~~~---------~~~~~gt~~y~aPE~~ 190 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGVE---------FKNIFGTPEFVAPEIV 190 (321)
T ss_dssp CEEECCCTTCEECCTTCC---------CCCCCSCGGGCCHHHH
T ss_pred CEEEccCccceecCcccc---------ccccCCCCCccCcccc
Confidence 799999999987643211 1124699999999975
No 158
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=2.3e-28 Score=261.98 Aligned_cols=182 Identities=24% Similarity=0.386 Sum_probs=139.5
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc--ccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCCCC
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDFKG 605 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 605 (725)
...++|+..+.||+|+||.||+|++..+++.||||++... .....+++.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~--- 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN--- 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT---
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC---
Confidence 3457899999999999999999999999999999998643 2334567889999999997 999999999986543
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
....|+|||||+ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred CCEEEEEecccC-cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 236899999997 5999998753 478899999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCC-------------CCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTS-------------SKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||+|+.+........ ..........+||++|+|||++.
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 203 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL 203 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHT
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhc
Confidence 9999987643211100 00111223468999999999864
No 159
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.95 E-value=2e-28 Score=256.80 Aligned_cols=168 Identities=28% Similarity=0.389 Sum_probs=141.8
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCcce
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 608 (725)
..++|+..+.||+|+||.||+|+++.+++.||||++...... +.+|++++.++ +||||+++++++.... .
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGK-----Y 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSS-----E
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCC-----E
Confidence 356799999999999999999999999999999999755332 34688888888 7999999999976554 8
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC----CceEE
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD----MVAHV 684 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~----~~~kl 684 (725)
.|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||++..+ +.+||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQK------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 899999999999999997654 589999999999999999999999 99999999999998543 35999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|||+|+....... .....+||+.|+|||++
T Consensus 162 ~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~ 192 (342)
T 2qr7_A 162 CDFGFAKQLRAENG--------LLMTPCYTANFVAPEVL 192 (342)
T ss_dssp CCCTTCEECBCTTC--------CBCCSSCCSSCCCHHHH
T ss_pred EECCCcccCcCCCC--------ceeccCCCccccCHHHh
Confidence 99999987643311 11235799999999975
No 160
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.95 E-value=7.5e-29 Score=259.40 Aligned_cols=175 Identities=26% Similarity=0.448 Sum_probs=139.2
Q ss_pred HHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--chHHHHHHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 527 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
.....++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++....
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH-- 106 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT--
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--
Confidence 34456789999999999999999999999999999999975432 23456789999999999999999999987654
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec-----CC
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-----HD 679 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~-----~~ 679 (725)
..|+||||+++ +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .+
T Consensus 107 ---~~~lv~e~~~~-~L~~~~~~~~------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 173 (329)
T 3gbz_A 107 ---RLHLIFEYAEN-DLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASET 173 (329)
T ss_dssp ---EEEEEEECCSE-EHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----C
T ss_pred ---EEEEEEecCCC-CHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCcc
Confidence 78999999975 9999998654 588999999999999999999999 999999999999994 45
Q ss_pred CceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 680 MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 680 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+.+||+|||+|+....... .....+||+.|+|||++.
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 210 (329)
T 3gbz_A 174 PVLKIGDFGLARAFGIPIR--------QFTHEIITLWYRPPEILL 210 (329)
T ss_dssp CEEEECCTTHHHHHC-------------------CCTTCCHHHHT
T ss_pred ceEEECcCCCccccCCccc--------ccCCCcCCccccCHHHhc
Confidence 5699999999987643211 112246899999999863
No 161
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.95 E-value=3.2e-28 Score=248.39 Aligned_cols=174 Identities=26% Similarity=0.459 Sum_probs=135.7
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
..++|+..+.||+|+||.||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 84 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN---- 84 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS----
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC----
Confidence 3467999999999999999999998899999999997542 233578899999999999999999999976554
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 155 (278)
T 3cok_A 85 -YVYLVLEMCHNGEMNRYLKNRVK-----PFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIAD 155 (278)
T ss_dssp -EEEEEEECCTTEEHHHHHHTCSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECC
T ss_pred -eEEEEEecCCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEe
Confidence 78999999999999999986532 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+++....... ......||+.|+|||++.
T Consensus 156 fg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~ 185 (278)
T 3cok_A 156 FGLATQLKMPHE--------KHYTLCGTPNYISPEIAT 185 (278)
T ss_dssp CTTCEECC------------------------------
T ss_pred ecceeeccCCCC--------cceeccCCCCcCCcchhc
Confidence 999986543211 111256999999999863
No 162
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.95 E-value=2.4e-28 Score=248.86 Aligned_cols=170 Identities=31% Similarity=0.462 Sum_probs=129.6
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----- 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----
Confidence 357999999999999999999999999999999997542 233567899999999999999999999986554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..++||||+ ++++.+++.... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 87 ~~~lv~e~~-~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df 156 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp CEEEEEECC-CEEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCS
T ss_pred eEEEEehhc-CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeec
Confidence 789999999 678988887654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+....... ....+||+.|+|||++.
T Consensus 157 g~~~~~~~~~~---------~~~~~~t~~y~aPE~~~ 184 (275)
T 2eue_A 157 GLSNIMTDGNF---------LKTSCGSPNYAAPEVIS 184 (275)
T ss_dssp SCC------------------------CTTCCHHHHC
T ss_pred ccceeccCccc---------ccCCCCCcCcCCceeee
Confidence 99976543211 11246999999999763
No 163
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.95 E-value=6.5e-28 Score=249.87 Aligned_cols=186 Identities=34% Similarity=0.532 Sum_probs=155.0
Q ss_pred CCccCHHHHHHHhcCCCCC------cccccccceEEEEEEECCCceEEEEEEeeccc----cchHHHHHHHHHHHHcCCC
Q 048668 519 FPMVSYAELSKATSEFSSS------NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ----KGAFRSFVAECEALRNIRH 588 (725)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~------~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h 588 (725)
...++..++..++.+|... +.||+|+||.||+|++ +++.||||++.... ....+.+.+|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 4557788999999998877 8899999999999987 57889999986432 3345789999999999999
Q ss_pred CcccceeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecC
Q 048668 589 RNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGD 668 (725)
Q Consensus 589 ~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrd 668 (725)
|||+++++++.... ..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ +|+|||
T Consensus 90 ~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~d 158 (307)
T 2nru_A 90 ENLVELLGFSSDGD-----DLCLVYVYMPNGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRD 158 (307)
T ss_dssp TTBCCEEEEECSSS-----SCEEEEECCTTCBHHHHHHTGGG---CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCeEEEEEEEecCC-----ceEEEEEecCCCcHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCC
Confidence 99999999976544 78999999999999999975321 12589999999999999999999999 999999
Q ss_pred CCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 669 LKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 669 lkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+||+++.++.+||+|||+++........ .......||+.|+|||++
T Consensus 159 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~g~~~y~aPE~~ 207 (307)
T 2nru_A 159 IKSANILLDEAFTAKISDFGLARASEKFAQT------VMTSRIVGTTAYMAPEAL 207 (307)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEECCSCSSC------EECSSCCSCGGGCCHHHH
T ss_pred CCHHHEEEcCCCcEEEeeccccccccccccc------ccccccCCCcCcCChHHh
Confidence 9999999999999999999999865432111 111235699999999975
No 164
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.95 E-value=3e-28 Score=268.84 Aligned_cols=172 Identities=31% Similarity=0.426 Sum_probs=147.0
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
..++|++.+.||+|+||.||+|+++.+++.||||++... .....+.+.+|++++++++||||+++++++....
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----- 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC-----
Confidence 345799999999999999999999999999999999753 2334678899999999999999999999977654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec---CCCceEE
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHV 684 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~---~~~~~kl 684 (725)
..|+|||||++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 7899999999999999987654 589999999999999999999999 999999999999995 4567999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+...... .....+||+.|+|||++.
T Consensus 166 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 196 (486)
T 3mwu_A 166 IDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLR 196 (486)
T ss_dssp CSCSCTTTBCCC-------------CCTTGGGGCCGGGGG
T ss_pred EECCcCeECCCCC---------ccCCCcCCCCCCCHHHhC
Confidence 9999998664321 112357999999999863
No 165
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.95 E-value=9e-29 Score=253.98 Aligned_cols=168 Identities=22% Similarity=0.438 Sum_probs=145.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCc-------eEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDE-------MIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
.++|+..+.||+|+||.||+|++..++ ..||+|++........+++.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 357888999999999999999987665 579999997666666788999999999999999999999986654
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc--
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-- 681 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~-- 681 (725)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 86 ----~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 86 ----ENILVQEFVKFGSLDTYLKKNKN-----CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp ----CCEEEEECCTTCBHHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGG
T ss_pred ----CCEEEEECCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccc
Confidence 67999999999999999986532 489999999999999999999999 9999999999999998887
Q ss_pred ------eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 ------AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 ------~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||+++..... ....||+.|+|||++
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~~~------------~~~~~~~~y~aPE~~ 189 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVLPK------------DILQERIPWVPPECI 189 (289)
T ss_dssp GTBCCEEEECCCCSCTTTSCH------------HHHHHTTTTSCHHHH
T ss_pred ccccceeeeccCcccccccCc------------cccCCcCcccCHHHh
Confidence 999999998654221 124589999999975
No 166
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=2.1e-28 Score=262.61 Aligned_cols=175 Identities=26% Similarity=0.429 Sum_probs=147.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCee
Confidence 357889999999999999999999999999999997543 334577889999999999999999999876543 2367
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----cCCCceEEc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DHDMVAHVG 685 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill----~~~~~~kl~ 685 (725)
|+||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred EEEEecCCCCCHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEe
Confidence 999999999999999986532 12389999999999999999999999 99999999999999 777889999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+|+....... ....+||+.|+|||++
T Consensus 159 DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~ 187 (396)
T 4eut_A 159 DFGAARELEDDEQ---------FVSLYGTEEYLHPDMY 187 (396)
T ss_dssp CGGGCEECCCGGG---------SSCSSSCCTTCCHHHH
T ss_pred cCCCceEccCCCc---------cccccCCccccCHHHh
Confidence 9999987643321 1125699999999975
No 167
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.95 E-value=1.9e-28 Score=257.75 Aligned_cols=166 Identities=30% Similarity=0.447 Sum_probs=143.7
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc---chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
+.|+..+.||+|+||.||+|++..+++.||||++..... ...+++.+|++++++++||||+++++++.... .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-----T 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----e
Confidence 458888999999999999999988999999999975432 23467899999999999999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||++ |++.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred EEEEEecCC-CCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 899999997 688888865432 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+..... ...+||+.|+|||++
T Consensus 200 ~a~~~~~~------------~~~~gt~~y~aPE~~ 222 (348)
T 1u5q_A 200 SASIMAPA------------NSFVGTPYWMAPEVI 222 (348)
T ss_dssp TCBSSSSB------------CCCCSCGGGCCHHHH
T ss_pred CceecCCC------------CcccCCcceeCHhhh
Confidence 99765321 124699999999986
No 168
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.4e-29 Score=261.51 Aligned_cols=266 Identities=20% Similarity=0.212 Sum_probs=126.7
Q ss_pred CcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEcc
Q 048668 39 LQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIG 118 (725)
Q Consensus 39 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~ 118 (725)
++.++++.+.+.......+..+++|++|+|++|+|+++.|..|.++++|++|+|++|+++ .++. +..+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLY-ETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCE-EEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCC-cchh--hhhcCCCCEEECc
Confidence 344455555554444444444455555555555555544455555555555555555554 2221 3445555555555
Q ss_pred CceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccC
Q 048668 119 ANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDN 198 (725)
Q Consensus 119 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 198 (725)
+|+++++.+ .++|++|++++|+|+++.+.. +++|++|++++|
T Consensus 89 ~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~~~---------------------------------~~~L~~L~l~~N 130 (317)
T 3o53_A 89 NNYVQELLV-----GPSIETLHAANNNISRVSCSR---------------------------------GQGKKNIYLANN 130 (317)
T ss_dssp SSEEEEEEE-----CTTCCEEECCSSCCSEEEECC---------------------------------CSSCEEEECCSS
T ss_pred CCccccccC-----CCCcCEEECCCCccCCcCccc---------------------------------cCCCCEEECCCC
Confidence 555544321 244555555555554433222 234444444444
Q ss_pred cccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhh-cCCCCccEEeccCcccccCC
Q 048668 199 QFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVI-GELKNLQLLGLYKNFLQGSI 277 (725)
Q Consensus 199 ~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~ 277 (725)
++++..+ ..+..+++|++|+|++|.+.+..+..+ ..+++|++|+|++|.+++..
T Consensus 131 ~l~~~~~-------------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 185 (317)
T 3o53_A 131 KITMLRD-------------------------LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (317)
T ss_dssp CCCSGGG-------------------------BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CCCCccc-------------------------hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc
Confidence 4443222 223333344444444444443333333 23444444444444444321
Q ss_pred CCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccc
Q 048668 278 PSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQF 357 (725)
Q Consensus 278 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 357 (725)
+ ...+++|++|++++|+++ .+|..+..+..+ ++|++++|.++ .+|..+..+++|+.|++++|.+
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~------------~l~~~~~~l~~L-~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~ 249 (317)
T 3o53_A 186 G--QVVFAKLKTLDLSSNKLA------------FMGPEFQSAAGV-TWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGF 249 (317)
T ss_dssp C--CCCCTTCCEEECCSSCCC------------EECGGGGGGTTC-SEEECTTSCCC-EECTTCCCCTTCCEEECTTCCC
T ss_pred c--ccccccCCEEECCCCcCC------------cchhhhcccCcc-cEEECcCCccc-chhhHhhcCCCCCEEEccCCCc
Confidence 1 112444444444444443 333333333333 44555555554 3445566666777777777777
Q ss_pred c-ccCccccccccCCcEEEccCC-ccccccC
Q 048668 358 S-GMIPVTLSTCVSLEYVDISSN-CFHGIIP 386 (725)
Q Consensus 358 ~-~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~ 386 (725)
. +.+|..+..+++|+.|++++| .+++..|
T Consensus 250 ~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 250 HCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp BHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred cCcCHHHHHhccccceEEECCCchhccCCch
Confidence 6 556666666677777777633 3554443
No 169
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.95 E-value=3.6e-28 Score=246.51 Aligned_cols=171 Identities=30% Similarity=0.511 Sum_probs=145.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++. ++..||+|++..... ..+++.+|++++++++||||+++++++.... ..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY-----PIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----ceE
Confidence 457889999999999999999887 577899999975433 3467899999999999999999999976544 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 151 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMT 151 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred EEEEccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccc
Confidence 99999999999999976532 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+....... .......||+.|+|||++
T Consensus 152 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~ 177 (268)
T 3sxs_A 152 RYVLDDQY-------VSSVGTKFPVKWSAPEVF 177 (268)
T ss_dssp EECCTTCE-------EECCSCCCCGGGCCHHHH
T ss_pred eecchhhh-------hcccCCCcCcccCCHHHH
Confidence 87643311 111234578889999975
No 170
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.95 E-value=1.8e-28 Score=258.38 Aligned_cols=180 Identities=26% Similarity=0.443 Sum_probs=147.4
Q ss_pred HhcCCCCCcccccccceEEEEEEEC-----CCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
..++|+..+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|++++++++||||+++++++....
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK- 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC-
Confidence 4568999999999999999999986 456899999997543 334568999999999999999999999976544
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCcc------------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQV------------------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMV 665 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv 665 (725)
..|+||||+++|+|.+++....... ....+++.+++.++.||+.||+|||++ +|+
T Consensus 124 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 124 ----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred ----ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 7899999999999999998643210 013689999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 666 HGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 666 Hrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||||||+||+++.++.+||+|||+++......... ......||+.|+|||++
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~t~~y~aPE~~ 248 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK------ADGNDAIPIRWMPPESI 248 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----------CCBCGGGCCHHHH
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCcccc------ccCCCcccceecChhhh
Confidence 99999999999999999999999998764332111 11224689999999975
No 171
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.95 E-value=3.1e-28 Score=249.28 Aligned_cols=173 Identities=28% Similarity=0.385 Sum_probs=143.3
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
+.|...+.||+|+||.||+|+++.++..||+|++.... ....+.+.+|++++++++||||+++++++.... ..|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-----NMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-----eEE
Confidence 47889999999999999999999999999999997653 334678999999999999999999999986554 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---cCCCceEEccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDF 687 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill---~~~~~~kl~Df 687 (725)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 97 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQA--RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeCCCCcHHHHHHhhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 99999999999999865321 112589999999999999999999999 99999999999999 45678999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+....... .....||+.|+|||++
T Consensus 172 g~a~~~~~~~~---------~~~~~~t~~y~aPE~~ 198 (285)
T 3is5_A 172 GLAELFKSDEH---------STNAAGTALYMAPEVF 198 (285)
T ss_dssp CCCCC-------------------CTTGGGCCHHHH
T ss_pred ecceecCCccc---------CcCcccccCcCChHHh
Confidence 99976543211 1225699999999975
No 172
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=2.7e-28 Score=256.28 Aligned_cols=182 Identities=31% Similarity=0.488 Sum_probs=141.7
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHH--HHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEA--LRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++ +++.||||++.... ...+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46889999999999999999987 68899999997543 2344444444 44589999999998766544555567
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcC------CCCcEecCCCCCCeeecCCCce
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC------QPPMVHGDLKPSNVLLDHDMVA 682 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------~~~ivHrdlkp~Nill~~~~~~ 682 (725)
.++||||+++|+|.+++.... .++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEEecCCCCcHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 899999999999999997553 588889999999999999999863 3389999999999999999999
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+.+..................+||+.|+|||++.
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 201 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHT
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhc
Confidence 999999998765432221111122233457999999999863
No 173
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.95 E-value=5.1e-28 Score=246.57 Aligned_cols=175 Identities=24% Similarity=0.369 Sum_probs=149.9
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
..++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----I 79 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----E
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-----E
Confidence 3467999999999999999999999899999999997553 334578899999999999999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 150 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (276)
T ss_dssp EEEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEEEecCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCC
Confidence 899999999999999997543 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.++......... ......||+.|+|||++.
T Consensus 151 ~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~ 180 (276)
T 2yex_A 151 LATVFRYNNRER------LLNKMCGTLPYVAPELLK 180 (276)
T ss_dssp TCEECEETTEEC------CBCCCCSCGGGCCGGGGT
T ss_pred CccccCCCcchh------cccCCccccCccChHHHh
Confidence 998664321111 112356999999999863
No 174
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.95 E-value=2.9e-28 Score=261.34 Aligned_cols=172 Identities=23% Similarity=0.336 Sum_probs=135.8
Q ss_pred hcCCCCC-cccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHc-CCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN-IRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~-~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|... +.||+|+||+||+|++..+++.||||+++.. ..+.+|++++.+ .+||||+++++++... +.+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 3456665 6899999999999999999999999999632 456788888754 5799999999987542 122357
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC---CCceEEc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVG 685 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~---~~~~kl~ 685 (725)
.|+|||||+||+|.+++..... ..+++..+..|+.||+.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEeCCCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 8999999999999999986532 2589999999999999999999999 9999999999999997 7899999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||+|+...... .....+||+.|||||++.
T Consensus 207 DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 236 (400)
T 1nxk_A 207 DFGFAKETTSHN---------SLTTPCYTPYYVAPEVLG 236 (400)
T ss_dssp CCTTCEECC--------------------CTTCCGGGSC
T ss_pred ecccccccCCCC---------ccccCCCCCCccCHhhcC
Confidence 999998654321 112357999999999863
No 175
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.95 E-value=4.2e-28 Score=257.19 Aligned_cols=175 Identities=29% Similarity=0.456 Sum_probs=149.8
Q ss_pred HHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--------chHHHHHHHHHHHHcC-CCCcccceee
Q 048668 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------GAFRSFVAECEALRNI-RHRNLIKIIT 596 (725)
Q Consensus 526 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~ 596 (725)
......++|+..+.||+|+||.||+|++..+|+.||||+++.... ...+.+.+|+++++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 344556789999999999999999999988999999999975431 1245688999999999 7999999999
Q ss_pred EeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 048668 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676 (725)
Q Consensus 597 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill 676 (725)
++.... ..|+||||++|++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 168 ~~~~~~-----~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~ 233 (365)
T 2y7j_A 168 SYESSS-----FMFLVFDLMRKGELFDYLTEKV------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILL 233 (365)
T ss_dssp EEEBSS-----EEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEeeCC-----EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 976554 7899999999999999997543 589999999999999999999999 99999999999999
Q ss_pred cCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 677 DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 677 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+.++.+||+|||++..+..... ....+||+.|+|||++
T Consensus 234 ~~~~~ikl~DfG~~~~~~~~~~---------~~~~~gt~~y~aPE~~ 271 (365)
T 2y7j_A 234 DDNMQIRLSDFGFSCHLEPGEK---------LRELCGTPGYLAPEIL 271 (365)
T ss_dssp CTTCCEEECCCTTCEECCTTCC---------BCCCCSCGGGCCHHHH
T ss_pred CCCCCEEEEecCcccccCCCcc---------cccCCCCCCccChhhc
Confidence 9999999999999987643211 1235799999999975
No 176
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.95 E-value=4.8e-28 Score=247.91 Aligned_cols=171 Identities=25% Similarity=0.431 Sum_probs=147.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----F 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC-----E
Confidence 468999999999999999999999999999999997553 234567889999999999999999999986554 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc---eEEc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---AHVG 685 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~---~kl~ 685 (725)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 899999999999999987654 589999999999999999999999 9999999999999987655 9999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||.+........ .....||+.|+|||++.
T Consensus 151 Dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~ 180 (284)
T 3kk8_A 151 DFGLAIEVNDSEA---------WHGFAGTPGYLSPEVLK 180 (284)
T ss_dssp CCTTCEECCSSCB---------CCCSCSCGGGCCHHHHT
T ss_pred eceeeEEcccCcc---------ccCCCCCcCCcCchhhc
Confidence 9999976543211 11256999999999853
No 177
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.95 E-value=4.1e-28 Score=254.44 Aligned_cols=172 Identities=21% Similarity=0.350 Sum_probs=148.7
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
..++|...+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 114 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND---- 114 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC----
Confidence 3467999999999999999999999999999999997542 234567899999999999999999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 115 -~~~lv~e~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~D 184 (335)
T 2owb_A 115 -FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGD 184 (335)
T ss_dssp -EEEEEECCCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECC
T ss_pred -eEEEEEecCCCCCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEee
Confidence 7899999999999999987654 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+++....... ......||+.|+|||++
T Consensus 185 fg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~ 213 (335)
T 2owb_A 185 FGLATKVEYDGE--------RKKVLCGTPNYIAPEVL 213 (335)
T ss_dssp CTTCEECCSTTC--------CBCCCCSCCSSCCHHHH
T ss_pred ccCceecccCcc--------cccccCCCccccCHHHh
Confidence 999987643211 11225699999999975
No 178
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.95 E-value=4.8e-28 Score=249.22 Aligned_cols=172 Identities=21% Similarity=0.342 Sum_probs=148.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|...+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 467889999999999999999999999999999997542 234567889999999999999999999986554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 7899999999999999987654 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+++....... ......||+.|+|||++.
T Consensus 160 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~ 188 (294)
T 2rku_A 160 GLATKVEYDGE--------RKKVLCGTPNYIAPEVLS 188 (294)
T ss_dssp TTCEECCSTTC--------CBCCCCSCCSSCCHHHHT
T ss_pred cCceecccCcc--------ccccccCCCCcCCcchhc
Confidence 99987543211 112256999999999863
No 179
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.95 E-value=2.8e-28 Score=253.10 Aligned_cols=170 Identities=24% Similarity=0.365 Sum_probs=142.1
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
++|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-----RL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-----eE
Confidence 578899999999999999999999999999999865432 23467889999999999999999999987654 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
++||||++++++.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQR------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCchHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 99999999999999887554 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+........ ....+||+.|+|||++
T Consensus 149 ~~~~~~~~~~--------~~~~~~~~~y~aPE~~ 174 (311)
T 4agu_A 149 ARLLTGPSDY--------YDDEVATRWYRSPELL 174 (311)
T ss_dssp CEECC--------------------GGGCCHHHH
T ss_pred chhccCcccc--------cCCCcCCccccChHHH
Confidence 9876432111 1124699999999975
No 180
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.95 E-value=2e-28 Score=270.05 Aligned_cols=174 Identities=26% Similarity=0.542 Sum_probs=148.1
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
...+|+..+.||+|+||.||+|++..++..||||+++... ...++|.+|++++++++||||++++++|.... ..
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 291 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PF 291 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SC
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC-----cE
Confidence 3457888899999999999999998889999999997543 34578999999999999999999999986554 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 292 ~lv~E~~~~g~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp EEEEECCTTCBHHHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred EEEEEccCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeeccc
Confidence 999999999999999986432 1588999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+........ ......+|+.|+|||++
T Consensus 365 a~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 391 (495)
T 1opk_A 365 SRLMTGDTYT-------AHAGAKFPIKWTAPESL 391 (495)
T ss_dssp EECCTTCCEE-------CCTTCCCCGGGCCHHHH
T ss_pred ceeccCCcee-------ecCCCcCCcceeCHhHH
Confidence 9876432111 11224578899999975
No 181
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=2.2e-28 Score=257.90 Aligned_cols=185 Identities=25% Similarity=0.349 Sum_probs=146.7
Q ss_pred HHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc-----ccchHHHHHHHHHHHHcCCCCcccceeeEeecC
Q 048668 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK-----QKGAFRSFVAECEALRNIRHRNLIKIITICSST 601 (725)
Q Consensus 527 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 601 (725)
+....++|+..+.||+|+||.||+|++..+++.||+|++... .....+++.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345566899999999999999999999999999999999753 234567899999999999999999999998655
Q ss_pred CCCCcceeeEEEeccCCCCHHHHhcccCCcc----------------------------------ccccCCHHHHHHHHH
Q 048668 602 DFKGVDFKALVFEYMGNGSLEDWLHQSNDQV----------------------------------EVCKLSLIQRLNIAI 647 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~----------------------------------~~~~~~~~~~~~i~~ 647 (725)
. ..++||||+++|+|.+++....... ....+++..++.++.
T Consensus 101 ~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 101 Q-----YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp S-----EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred C-----eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 4 7899999999999999996321100 011246777889999
Q ss_pred HHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC--ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 648 DVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM--VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 648 ~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~--~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|++.||+|||+. +|+||||||+||+++.++ .+||+|||+|+.+....... ........||+.|+|||++
T Consensus 176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~ 246 (345)
T 3hko_A 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE----YYGMTTKAGTPYFVAPEVL 246 (345)
T ss_dssp HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHH
T ss_pred HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccc----cccccccCCCccccCchhh
Confidence 999999999999 999999999999998776 89999999998764322111 1112235699999999986
No 182
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.95 E-value=2.7e-28 Score=249.00 Aligned_cols=170 Identities=26% Similarity=0.438 Sum_probs=145.0
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
+.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 82 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT---- 82 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC----
Confidence 3467999999999999999999999999999999996432 233567889999999999999999999986554
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 -~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 83 -RVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp -EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECS
T ss_pred -EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEe
Confidence 7899999999999999997654 588999999999999999999998 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||++....... .....||+.|+|||++
T Consensus 153 fg~~~~~~~~~----------~~~~~~~~~y~aPE~~ 179 (279)
T 3fdn_A 153 FGWSVHAPSSR----------RTDLCGTLDYLPPEMI 179 (279)
T ss_dssp CCEESCC------------------CCCCTTCCHHHH
T ss_pred ccccccCCccc----------ccccCCCCCccCHhHh
Confidence 99986543221 1124699999999975
No 183
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.95 E-value=1.7e-28 Score=256.17 Aligned_cols=185 Identities=25% Similarity=0.454 Sum_probs=133.1
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCce---EEEEEEeecc--ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEM---IVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
..++|+..+.||+|+||.||+|++..++. .||||+++.. .....+++.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34579999999999999999999876664 8999999754 334567899999999999999999999998765422
Q ss_pred C-cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 605 G-VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 605 ~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
+ ....++||||+++|+|.+++...........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 1 112489999999999999997543222223589999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|||+|+......... ......||+.|+|||++
T Consensus 178 l~Dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~ 211 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYR------QGCASKLPVKWLALESL 211 (323)
T ss_dssp ECCCCC-----------------------CCGGGCCHHHH
T ss_pred Eeecccccccccccccc------ccccccCcccccCchhh
Confidence 99999998764432111 11124578899999975
No 184
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.95 E-value=1.8e-28 Score=260.13 Aligned_cols=178 Identities=29% Similarity=0.367 Sum_probs=149.5
Q ss_pred cCHHHHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-----CCcccceee
Q 048668 522 VSYAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-----HRNLIKIIT 596 (725)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~ 596 (725)
+++.+.....++|++.+.||+|+||.||+|++..+++.||||++... ....+.+..|+++++++. ||||+++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 34444445567899999999999999999999999999999999643 233466788999999986 999999999
Q ss_pred EeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 048668 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676 (725)
Q Consensus 597 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill 676 (725)
++...+ ..|+||||+ +++|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 104 ~~~~~~-----~~~lv~e~~-~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 170 (360)
T 3llt_A 104 KFMYYD-----HMCLIFEPL-GPSLYEIITRNNYN----GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILL 170 (360)
T ss_dssp EEEETT-----EEEEEECCC-CCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred eeeECC-----eeEEEEcCC-CCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEE
Confidence 987654 789999999 89999999865422 588999999999999999999999 99999999999999
Q ss_pred cC-------------------------CCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 677 DH-------------------------DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 677 ~~-------------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+. ++.+||+|||+|+...... ...+||+.|+|||++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----------~~~~gt~~y~aPE~~~ 232 (360)
T 3llt_A 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----------GSIINTRQYRAPEVIL 232 (360)
T ss_dssp SCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----------CSCCSCGGGCCHHHHT
T ss_pred ccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----------cCccCcccccCcHHHc
Confidence 75 7899999999998643221 1256999999999864
No 185
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.95 E-value=3.4e-28 Score=268.88 Aligned_cols=170 Identities=26% Similarity=0.401 Sum_probs=142.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.+.|+..+.||+|+||.||+|+++.++..||+|++.... ......+.+|++++++++||||+++++++.... .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR-----N 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 346889999999999999999999999999999997543 334578899999999999999999999986654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC---CceEEc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVG 685 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~---~~~kl~ 685 (725)
.|+|||||++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.. +.+||+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEE
Confidence 899999999999999987654 589999999999999999999999 99999999999999764 459999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+|+....... ....+||++|+|||++
T Consensus 182 DfG~a~~~~~~~~---------~~~~~gt~~y~aPE~l 210 (494)
T 3lij_A 182 DFGLSAVFENQKK---------MKERLGTAYYIAPEVL 210 (494)
T ss_dssp CCTTCEECBTTBC---------BCCCCSCTTTCCHHHH
T ss_pred ECCCCeECCCCcc---------ccccCCCcCeeCHHHH
Confidence 9999987643311 1235799999999975
No 186
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.95 E-value=2.6e-28 Score=259.12 Aligned_cols=178 Identities=25% Similarity=0.340 Sum_probs=150.9
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
...+|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++..........
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3458999999999999999999999999999999997543 334477899999999999999999999987766555567
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEcccC-cCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 899999997 5999998753 488999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+.......... .....+||+.|+|||++
T Consensus 174 ~a~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~ 203 (364)
T 3qyz_A 174 LARVADPDHDHTG-----FLTEYVATRWYRAPEIM 203 (364)
T ss_dssp TCEECCGGGCBCC-----TTCCCCSCGGGCCHHHH
T ss_pred ceEecCCCCCccc-----cccccccccCCCCCHHh
Confidence 9987654322111 11235799999999975
No 187
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=6.3e-28 Score=247.40 Aligned_cols=167 Identities=29% Similarity=0.507 Sum_probs=142.1
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccc-------hHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-------AFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++...... ..+++.+|++++++++||||+++++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 35788899999999999999999999999999999654321 126789999999999999999999987543
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeecCCCc
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHDMV 681 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivHrdlkp~Nill~~~~~ 681 (725)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ + |+||||||+||+++.++.
T Consensus 96 -----~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 96 -----PRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp -----TEEEEECCTTCBHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCT
T ss_pred -----CeEEEEecCCCCHHHHHhcccC-----CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCC
Confidence 2699999999999999876542 589999999999999999999998 7 999999999999988776
Q ss_pred -----eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 -----AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 -----~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||+|+..... .....||+.|+|||++
T Consensus 163 ~~~~~~kl~Dfg~~~~~~~~-----------~~~~~g~~~y~aPE~~ 198 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSVHS-----------VSGLLGNFQWMAPETI 198 (287)
T ss_dssp TCSCCEEECCCTTCBCCSSC-----------EECCCCCCTTSCGGGS
T ss_pred CCceeEEeCCCCcccccccc-----------ccccCCCccccCchhh
Confidence 999999999743221 1235699999999986
No 188
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.5e-28 Score=257.83 Aligned_cols=171 Identities=23% Similarity=0.373 Sum_probs=139.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc--ccchHHHHHHHHHHHHcCCCCcccceeeEeecCC-CCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSTD-FKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 607 (725)
.+.|+..+.||+|+||.||+|++..+|+.||||++... .....+++.+|++++++++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46789999999999999999999999999999999643 2234567899999999999999999999986543 12234
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+ +++|.++++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 569999999 88999998753 488999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+..... ....+||+.|+|||++
T Consensus 173 g~a~~~~~~-----------~~~~~~t~~y~aPE~~ 197 (367)
T 1cm8_A 173 GLARQADSE-----------MTGYVVTRWYRAPEVI 197 (367)
T ss_dssp TTCEECCSS-----------CCSSCSCGGGCCTHHH
T ss_pred ecccccccc-----------cCcCcCCCCcCCHHHH
Confidence 999865321 1125799999999975
No 189
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95 E-value=5e-28 Score=250.35 Aligned_cols=171 Identities=32% Similarity=0.512 Sum_probs=139.1
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
..++|+..+.||+|+||.||+|++.. .+|+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 104 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------ 104 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------
T ss_pred cccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC------
Confidence 34678889999999999999998753 48899887543 33457899999999999999999999986432
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DF 176 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCC
T ss_pred cEEEEEecCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccC
Confidence 47899999999999999975442 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+........ .......||+.|+|||++
T Consensus 177 g~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 206 (307)
T 3lb7_A 177 GLATVKSRWSGS------QQVEQPTGSVLWMAPEVI 206 (307)
T ss_dssp CSSCC------------------CCCCTTSCCHHHH
T ss_pred CCceeccccccc------ccccCCCCCcceECccee
Confidence 999865432111 111235699999999986
No 190
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.95 E-value=3.2e-28 Score=254.54 Aligned_cols=176 Identities=24% Similarity=0.356 Sum_probs=148.5
Q ss_pred cCCCCCcccccccceEEEEEE----ECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGI----LGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
++|+..+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG---RQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS---SC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC---Cc
Confidence 578899999999999999999 45688999999998766556678999999999999999999999876432 34
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred eEEEEEeecCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 68999999999999999976432 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+++........ ........||+.|+|||++
T Consensus 172 g~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~ 202 (327)
T 3lxl_A 172 GLAKLLPLDKDY-----YVVREPGQSPIFWYAPESL 202 (327)
T ss_dssp GGCEECCTTCSE-----EECSSCCCSCGGGSCHHHH
T ss_pred ccceecccCCcc-----ceeeccCCccccccCHHHh
Confidence 999876433211 1111224589999999975
No 191
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.95 E-value=4.2e-28 Score=252.16 Aligned_cols=180 Identities=23% Similarity=0.385 Sum_probs=147.3
Q ss_pred HhcCCCCCcccccccceEEEEEEE-----CCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
..++|...+.||+|+||.||+|++ +.+++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 99 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG- 99 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC-
Confidence 346788899999999999999987 3456899999997543 334578899999999999999999999976544
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCcc------------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQV------------------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMV 665 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv 665 (725)
..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+
T Consensus 100 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iv 172 (314)
T 2ivs_A 100 ----PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172 (314)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ----ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCc
Confidence 7899999999999999998654210 112488999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 666 HGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 666 Hrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||||||+||+++.++.+||+|||+++........ .......||+.|+|||++
T Consensus 173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 224 (314)
T 2ivs_A 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY------VKRSQGRIPVKWMAIESL 224 (314)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE------ECSSCCCSCGGGCCHHHH
T ss_pred ccccchheEEEcCCCCEEEccccccccccccccc------eeccCCCCcccccChhhh
Confidence 9999999999999999999999999876433211 111224588999999975
No 192
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95 E-value=4.4e-28 Score=248.04 Aligned_cols=172 Identities=28% Similarity=0.500 Sum_probs=142.8
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..++|+..+.||+|+||.||+|++. ++..||+|++..... ..+++.+|++++++++||||+++++++.... ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-----PI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC-----Ce
Confidence 4568889999999999999999987 677899999975433 3467899999999999999999999976544 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 166 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGL 166 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGGG-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred EEEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccc
Confidence 999999999999999976432 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++........ ......||+.|+|||++
T Consensus 167 ~~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 193 (283)
T 3gen_A 167 SRYVLDDEYT-------SSVGSKFPVRWSPPEVL 193 (283)
T ss_dssp GGGBCCHHHH-------STTSTTSCGGGCCHHHH
T ss_pred cccccccccc-------cccCCccCcccCCHHHh
Confidence 9866432111 11224578899999975
No 193
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.95 E-value=6.4e-28 Score=267.36 Aligned_cols=171 Identities=28% Similarity=0.421 Sum_probs=145.1
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc-------------chHHHHHHHHHHHHcCCCCcccceee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-------------GAFRSFVAECEALRNIRHRNLIKIIT 596 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 596 (725)
..+.|+..+.||+|+||.||+|+++.+++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 45689999999999999999999999999999999975321 23567899999999999999999999
Q ss_pred EeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 048668 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676 (725)
Q Consensus 597 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill 676 (725)
++.... ..|+|||||++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 114 VFEDKK-----YFYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179 (504)
T ss_dssp EEECSS-----EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEEcCC-----EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEE
Confidence 986554 7899999999999999997654 589999999999999999999999 99999999999999
Q ss_pred cCCC---ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 677 DHDM---VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 677 ~~~~---~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+.++ .+||+|||+|+....... ....+||+.|+|||++
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~ 220 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKDYK---------LRDRLGTAYYIAPEVL 220 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTTSC---------BCCCCSCTTTCCHHHH
T ss_pred ecCCCCccEEEEECCCCEEcCCCCc---------cccccCCcCCCCHHHh
Confidence 9776 699999999987643211 1225699999999975
No 194
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.95 E-value=2.2e-28 Score=255.63 Aligned_cols=173 Identities=26% Similarity=0.462 Sum_probs=137.7
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceE----EEEEEeecc-ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMI----VAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
.++|+..+.||+|+||.||+|++..+++. ||+|.+... .....++|.+|++++++++||||++++++|...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 89 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC----
Confidence 35788999999999999999998777765 477776533 234457899999999999999999999998754
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 90 --~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~ 159 (327)
T 3poz_A 90 --TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp --SEEEEEECCTTCBHHHHHHHSTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred --CeEEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEc
Confidence 36799999999999999987543 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+|+........ .......||+.|+|||++
T Consensus 160 Dfg~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~ 191 (327)
T 3poz_A 160 DFGLAKLLGAEEKE------YHAEGGKVPIKWMALESI 191 (327)
T ss_dssp CTTHHHHHTTTCC-------------CCCGGGSCHHHH
T ss_pred cCcceeEccCCccc------ccccCCCccccccChHHh
Confidence 99999876443211 111224578999999975
No 195
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.6e-29 Score=262.28 Aligned_cols=252 Identities=17% Similarity=0.198 Sum_probs=147.5
Q ss_pred cccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccc-ccCccccc-------ccCCCceeeccCCCCCCCCCh
Q 048668 32 FIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFY-GMFPRSIC-------NISSLEYFYLTSNRFSGSLPF 103 (725)
Q Consensus 32 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~ 103 (725)
.++..++|++|++++|++ ..|..+... |++|+|++|.++ ...|..+. ++++|++|+|++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 344555566666666666 344444432 666666666663 23444333 466666666666666655555
Q ss_pred hhh-cCCCCccEEEccCceeeeeCCCccccc-----CccceecCCCccccccCccCcccccccCeeecCCccCCccCCCC
Q 048668 104 DIV-VNLPNLKELGIGANNFFGLIPDSLSNA-----SNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAAND 177 (725)
Q Consensus 104 ~~~-~~l~~L~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~ 177 (725)
.+| ..+++|++|+|++|++++. |..++.+ ++|++|+|++|+|+++++..|..+++|++|++++|.+....
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--- 189 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER--- 189 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH---
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch---
Confidence 543 5566666666666666655 5555555 66666666666666666666666666666666666643210
Q ss_pred cccccc--cCCCCCCCEEECccCcccc--cCChhh-hhccccceeEEecCccceeccC-cccccccCCceEEecccccCC
Q 048668 178 LGFVTF--LTNCSSLKVLSLSDNQFGG--ELPHSI-ANLSSTMIVFLIGGNQISGTIP-LGIRNLVNLIALAVEVNQLHG 251 (725)
Q Consensus 178 ~~~~~~--~~~l~~L~~L~L~~N~l~~--~~p~~~-~~l~~~l~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~ 251 (725)
..+.. +.++++|++|+|++|++++ .++..+ ..++ +|+.|++++|.+.+..| ..+..+++|++|+|++|+|+
T Consensus 190 -~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~- 266 (312)
T 1wwl_A 190 -GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV-QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK- 266 (312)
T ss_dssp -HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC-CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-
T ss_pred -HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC-CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-
Confidence 00111 2566677777777777662 112222 2223 55566666666655543 34455677777777777777
Q ss_pred CCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCC
Q 048668 252 TIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQ 298 (725)
Q Consensus 252 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 298 (725)
.+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|+++
T Consensus 267 ~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 267 QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 3444444 6777777777777754 44 777777777777777665
No 196
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.2e-28 Score=271.22 Aligned_cols=234 Identities=21% Similarity=0.209 Sum_probs=153.9
Q ss_pred ccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeec
Q 048668 13 FKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYL 92 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 92 (725)
++|++|+|++|.|++..|..|+.+++|++|+|++|++++..| |..+++|++|+|++|.|+++.+ .++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 378888888888887666778888888888888888876555 7778888888888888775433 267888888
Q ss_pred cCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcc-cccccCeeecCCccCC
Q 048668 93 TSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFS-SLKILWRLNLEQNNLG 171 (725)
Q Consensus 93 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~-~l~~L~~L~L~~N~l~ 171 (725)
++|.|+ .++.. .+++|+.|+|++|.++++.|..|+.+++|++|+|++|.|+++.+..|. .+++|++|+|++|.++
T Consensus 107 ~~N~l~-~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 107 ANNNIS-RVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CSSCCC-CEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred cCCcCC-CCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 888887 44433 357788888888888877777777788888888888888777666665 6777888888888776
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccC-
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLH- 250 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~- 250 (725)
.++. ...+++|++|+|++|.+++. |..+..++ .|+.|++++|.+++ +|..+..+++|+.|++++|.+.
T Consensus 183 ~~~~--------~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~-~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 183 DVKG--------QVVFAKLKTLDLSSNKLAFM-GPEFQSAA-GVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp EEEC--------CCCCTTCCEEECCSSCCCEE-CGGGGGGT-TCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred cccc--------cccCCCCCEEECCCCCCCCC-CHhHcCCC-CccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 5532 23467777777777777743 32344443 44455555554442 3434444444444444444444
Q ss_pred CCCChhhcCCCCccEEec
Q 048668 251 GTIPDVIGELKNLQLLGL 268 (725)
Q Consensus 251 ~~~~~~~~~l~~L~~L~L 268 (725)
+.+|.++..++.|+.+++
T Consensus 252 ~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 252 GTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred cchHHHHHhCCCCcEEec
Confidence 333344444444444444
No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.8e-28 Score=256.90 Aligned_cols=174 Identities=30% Similarity=0.468 Sum_probs=140.0
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc-----chHHHHHHHHHHHHcCCCCcccceeeEeecCCC
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-----GAFRSFVAECEALRNIRHRNLIKIITICSSTDF 603 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 603 (725)
...++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++....
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS- 85 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT-
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC-
Confidence 345689999999999999999999998999999999975321 12346889999999999999999999976544
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
..++||||+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 86 ----~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 152 (346)
T 1ua2_A 86 ----NISLVFDFMET-DLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLK 152 (346)
T ss_dssp ----CCEEEEECCSE-EHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred ----ceEEEEEcCCC-CHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEE
Confidence 78999999976 89999876542 578888999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|||+|+....... .....+||+.|+|||++.
T Consensus 153 l~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 185 (346)
T 1ua2_A 153 LADFGLAKSFGSPNR--------AYTHQVVTRWYRAPELLF 185 (346)
T ss_dssp ECCCGGGSTTTSCCC--------CCCCSCCCCTTCCHHHHT
T ss_pred EEecccceeccCCcc--------cCCcccccccccCchHhh
Confidence 999999987643211 112356999999999863
No 198
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=1.9e-28 Score=258.94 Aligned_cols=173 Identities=22% Similarity=0.321 Sum_probs=146.0
Q ss_pred hcCCCCCcccccccceEEEEEEEC---CCceEEEEEEeeccc----cchHHHHHHHHHHHHcC-CCCcccceeeEeecCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ----KGAFRSFVAECEALRNI-RHRNLIKIITICSSTD 602 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 602 (725)
.++|+..+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 357999999999999999999984 588999999986432 22345677899999999 6999999999876654
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCce
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~ 682 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 133 -----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 133 -----KLHLILDYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp -----EEEEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred -----eEEEEeecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 7899999999999999998654 588999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+.+..... ......+||+.|+|||++.
T Consensus 199 kl~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~ 233 (355)
T 1vzo_A 199 VLTDFGLSKEFVADET-------ERAYDFCGTIEYMAPDIVR 233 (355)
T ss_dssp EESCSSEEEECCGGGG-------GGGCGGGSCCTTCCHHHHT
T ss_pred EEeeCCCCeecccCCC-------CcccCcccCcCccChhhhc
Confidence 9999999986543211 1122357999999999864
No 199
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.95 E-value=2.1e-28 Score=255.66 Aligned_cols=172 Identities=28% Similarity=0.460 Sum_probs=140.2
Q ss_pred cCCCCCcccccccceEEEEEEECCCceE----EEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMI----VAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
++|+..+.||+|+||.||+|++..+++. ||+|.+.... ....+++.+|+.++++++||||+++++++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 4788899999999999999999877765 7777765332 2334567889999999999999999998743
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHRG-----ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSGG-----GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred CccEEEEEeCCCCCHHHHHHHccc-----cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 257899999999999999976532 578889999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+.+....... ......||+.|+|||++
T Consensus 159 fg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~ 189 (325)
T 3kex_A 159 FGVADLLPPDDKQL------LYSEAKTPIKWMALESI 189 (325)
T ss_dssp CSGGGGSCCCTTCC------C-----CCTTTSCHHHH
T ss_pred CCcccccCcccccc------cccCCCCcccccChHHh
Confidence 99998765432111 11235688899999975
No 200
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.95 E-value=8.6e-28 Score=246.51 Aligned_cols=173 Identities=24% Similarity=0.379 Sum_probs=145.5
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 606 (725)
..++|+..+.||+|+||.||+|++..+++.||+|++.... .....++.+|+..+.++ +||||+++++++....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~---- 84 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD---- 84 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----
Confidence 3467999999999999999999999899999999997542 33456788999999999 8999999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC-------
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD------- 679 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~------- 679 (725)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 85 -HMLIQNEYCNGGSLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred -eEEEEEEecCCCcHHHHHHhhcc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 78999999999999999976421 012589999999999999999999999 99999999999999844
Q ss_pred ------------CceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 680 ------------MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 680 ------------~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
..+||+|||.++...... ...||+.|+|||++.
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~gt~~y~aPE~~~ 203 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQ------------VEEGDSRFLANEVLQ 203 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSC------------CCCCCGGGCCHHHHT
T ss_pred cccccccccCCceEEEEcccccccccCCcc------------ccCCCccccChhHhc
Confidence 479999999998654321 135999999999863
No 201
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.95 E-value=5.5e-28 Score=249.84 Aligned_cols=176 Identities=27% Similarity=0.431 Sum_probs=144.5
Q ss_pred cCCCCCcccccccceEEEEEE----ECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGI----LGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
..|+..+.||+|+||.||+|+ +..+++.||+|++.... ....+++.+|++++++++||||+++++++.... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---G 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---C
Confidence 458888999999999999999 45688999999997543 344578899999999999999999999987542 2
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ceEEEEEEeCCCCcHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 367899999999999999965432 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+........ ........||..|+|||++
T Consensus 170 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~ 201 (302)
T 4e5w_A 170 FGLTKAIETDKEY-----YTVKDDRDSPVFWYAPECL 201 (302)
T ss_dssp CTTCEECCTTCCE-----EECCCCTTCCGGGCCHHHH
T ss_pred ccccccccCCCcc-----eeccCCCCCCccccCCeee
Confidence 9999876443211 0111234689999999975
No 202
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.95 E-value=9.6e-28 Score=244.54 Aligned_cols=171 Identities=30% Similarity=0.481 Sum_probs=141.2
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT----- 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----
Confidence 357889999999999999999999899999999997542 234568899999999999999999999976654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 7899999999999999997654 588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+++....... .....||+.|+|||++.
T Consensus 156 g~~~~~~~~~~---------~~~~~~~~~y~aPE~~~ 183 (276)
T 2h6d_A 156 GLSNMMSDGEF---------LRTSCGSPNYAAPEVIS 183 (276)
T ss_dssp CGGGCCCC----------------------CCTGGGT
T ss_pred ccccccCCCcc---------eecccCCccccCHHHHc
Confidence 99986543211 11246999999999864
No 203
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.95 E-value=7.7e-28 Score=257.08 Aligned_cols=179 Identities=25% Similarity=0.411 Sum_probs=146.8
Q ss_pred hcCCCCCcccccccceEEEEEEECC-------CceEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCcccceeeEeecC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGE-------DEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICSST 601 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 601 (725)
.++|...+.||+|+||.||+|++.. .+..||||++.... ....+++.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 4578899999999999999999742 34689999997543 33457889999999999 899999999997655
Q ss_pred CCCCcceeeEEEeccCCCCHHHHhcccCCcc----------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 048668 602 DFKGVDFKALVFEYMGNGSLEDWLHQSNDQV----------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKP 671 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp 671 (725)
. ..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 148 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 148 G-----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred C-----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 4 7899999999999999998654210 112589999999999999999999999 999999999
Q ss_pred CCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 672 SNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 672 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+++.++.+||+|||+|+......... ......||+.|+|||++
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~ 265 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYK------KTTNGRLPVKWMAPEAL 265 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTC------CCTTCCCGGGGSCHHHH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccc------cccCCCCCcceeCHHHh
Confidence 99999999999999999998764332111 11224588999999975
No 204
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.95 E-value=9.1e-28 Score=245.68 Aligned_cols=169 Identities=26% Similarity=0.362 Sum_probs=144.3
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc------chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
++|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 468899999999999999999998999999999975421 13578999999999999999999999987654
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC----c
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM----V 681 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~----~ 681 (725)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 82 --~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 82 --DVVLILELVSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCC
T ss_pred --eEEEEEeecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCc
Confidence 7899999999999999997643 589999999999999999999999 999999999999999877 8
Q ss_pred eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||.++....... .....||+.|+|||++
T Consensus 151 ~kl~dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~ 183 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNE---------FKNIFGTPEFVAPEIV 183 (283)
T ss_dssp EEECCCTTCEECC-----------------CCCGGGCCHHHH
T ss_pred eEEEecccceeccCCCc---------ccccCCCcCccCccee
Confidence 99999999986643211 1124699999999975
No 205
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.95 E-value=8.6e-28 Score=253.93 Aligned_cols=181 Identities=26% Similarity=0.415 Sum_probs=147.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC---CC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF---KG 605 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 605 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999999999999999986543 2334678899999999999999999999876431 11
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
.+..|+||||+++ ++.+.+..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 3468999999975 88888765532 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||+|+.+....... .......+||+.|+|||++.
T Consensus 167 Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~ 201 (351)
T 3mi9_A 167 DFGLARAFSLAKNSQ----PNRYTNRVVTLWYRPPELLL 201 (351)
T ss_dssp CCTTCEECCCCSSSS----CCCCCSSCSCGGGCCHHHHT
T ss_pred cchhccccccccccc----ccccCCcccccCccCchhhc
Confidence 999998765332111 11223357999999999763
No 206
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=7.3e-30 Score=289.89 Aligned_cols=400 Identities=14% Similarity=0.121 Sum_probs=291.5
Q ss_pred CcccCcEEecCCCccCccCCccccCC--CCCcEEEccCCc-CCc-cCCCCCCCCCCCCEEEccCCccccc----Cccccc
Q 048668 11 SLFKLQALALAGNYLTGKLPDFIGNL--SALQVIHIKGNS-LGG-KFPTTLGLLRNLVQLNVAENKFYGM----FPRSIC 82 (725)
Q Consensus 11 ~l~~l~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~ 82 (725)
.+++|++|+|++|.+++..+..+... .+|++|+|++|. ++. ..+.....+++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 68899999999999987777777663 459999999997 221 1222334789999999999998765 344567
Q ss_pred ccCCCceeeccCCCCCCCCCh----hhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCcccc---ccCccCcc
Q 048668 83 NISSLEYFYLTSNRFSGSLPF----DIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFK---GKVSIDFS 155 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~----~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~---~~~~~~f~ 155 (725)
++++|++|++++|.++ .+.. ..+.++++|++|+|++|.+.++ +..+..+++|++|+++++... ......+.
T Consensus 190 ~~~~L~~L~L~~n~~~-~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l-~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 267 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFA-KISPKDLETIARNCRSLVSVKVGDFEILEL-VGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV 267 (592)
T ss_dssp HCCCCCEEECTTCCCS-SCCHHHHHHHHHHCTTCCEEECSSCBGGGG-HHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC
T ss_pred cCCCccEEEeeccCCC-ccCHHHHHHHHhhCCCCcEEeccCccHHHH-HHHHhhhhHHHhhcccccccccchHHHHHHhh
Confidence 8899999999999997 3332 2346789999999999999874 578899999999999865433 22334567
Q ss_pred cccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChh-hhhccccceeEEecCccceeccCcccc
Q 048668 156 SLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHS-IANLSSTMIVFLIGGNQISGTIPLGIR 234 (725)
Q Consensus 156 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~~l~~L~l~~n~i~~~~~~~~~ 234 (725)
.+++|+.|+++++.... ++..+..+++|++|+|++|.+++..... +..++ +|+.|++.++...+.++..+.
T Consensus 268 ~~~~L~~L~l~~~~~~~-------l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~-~L~~L~L~~~~~~~~l~~~~~ 339 (592)
T 3ogk_B 268 FPRKLCRLGLSYMGPNE-------MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCP-NLEVLETRNVIGDRGLEVLAQ 339 (592)
T ss_dssp CCTTCCEEEETTCCTTT-------GGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCT-TCCEEEEEGGGHHHHHHHHHH
T ss_pred ccccccccCccccchhH-------HHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCc-CCCEEeccCccCHHHHHHHHH
Confidence 78899999998864332 3356778899999999999987554433 45555 899999994433334445557
Q ss_pred cccCCceEEec-----------ccccCCC-CChhhcCCCCccEEeccCcccccCCCCCCcC-CCCCCEEeCC----CCcC
Q 048668 235 NLVNLIALAVE-----------VNQLHGT-IPDVIGELKNLQLLGLYKNFLQGSIPSGLGN-LTKLAKLDLG----SNSL 297 (725)
Q Consensus 235 ~l~~L~~L~L~-----------~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l 297 (725)
.+++|++|+++ .|.+++. .+..+..+++|++|+++.|.+++..+..+.. +++|++|+++ .|++
T Consensus 340 ~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l 419 (592)
T 3ogk_B 340 YCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERI 419 (592)
T ss_dssp HCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCC
T ss_pred hCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccc
Confidence 78999999999 4666643 2333566899999999999998766666655 8899999996 6666
Q ss_pred CCccccccccccccccccccccccccceecccCC--ccCCCcchhhhc-CCCCCeEEccCcccccc-CccccccccCCcE
Q 048668 298 QGNFIASQNKLIGALPQQLLSITTLSLYLDLSNN--LLNGSLPQQVGN-LKNLIILDISSNQFSGM-IPVTLSTCVSLEY 373 (725)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n--~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~ 373 (725)
++... ...++..+.....+ ++|++++| .+++..+..+.. +++|+.|++++|.+++. ++..+..+++|++
T Consensus 420 ~~~p~------~~~~~~~~~~~~~L-~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~ 492 (592)
T 3ogk_B 420 TDLPL------DNGVRSLLIGCKKL-RRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQK 492 (592)
T ss_dssp SSCCC------HHHHHHHHHHCTTC-CEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCE
T ss_pred cCchH------HHHHHHHHHhCCCC-CEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCe
Confidence 53100 00122223334444 88999754 366555555554 89999999999999863 4555678899999
Q ss_pred EEccCCcccccc-CccccCCCCCCEEeCCCCcccccCcccc-cCCCCCCeEEcccc
Q 048668 374 VDISSNCFHGII-PPSLGFLKSIKFLDVSCNNFSGQFPKFL-ENLSFLEFLNLSYN 427 (725)
Q Consensus 374 L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N 427 (725)
|+|++|.+++.. +..+..+++|+.|+|++|+++..-...+ ..++.+....+..+
T Consensus 493 L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 493 LEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp EEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred eeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 999999987653 3344679999999999999986543333 35666666555554
No 207
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.95 E-value=3.3e-28 Score=268.59 Aligned_cols=170 Identities=30% Similarity=0.442 Sum_probs=147.7
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----- 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 357889999999999999999999999999999997542 345678999999999999999999999976654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---cCCCceEE
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHV 684 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill---~~~~~~kl 684 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRK------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEE
Confidence 8899999999999999997654 589999999999999999999999 99999999999999 46789999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|||+|+.+.... .....+||++|+|||++
T Consensus 171 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~ 200 (484)
T 3nyv_A 171 IDFGLSTHFEASK---------KMKDKIGTAYYIAPEVL 200 (484)
T ss_dssp CCTTHHHHBCCCC---------SHHHHTTGGGTCCHHHH
T ss_pred EeeeeeEEccccc---------ccccCCCCccccCceee
Confidence 9999998764321 12235799999999975
No 208
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.95 E-value=8.3e-28 Score=248.66 Aligned_cols=170 Identities=28% Similarity=0.391 Sum_probs=144.1
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|...+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.... ..|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-----HYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-----EEE
Confidence 457889999999999999999999899999999998654444567889999999999999999999976554 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---cCCCceEEccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDF 687 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill---~~~~~~kl~Df 687 (725)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 83 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERG------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEcCCCccHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccC
Confidence 9999999999999997654 588999999999999999999999 99999999999999 77889999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+++..... .....+||+.|+|||++.
T Consensus 154 g~~~~~~~~----------~~~~~~~~~~y~aPE~~~ 180 (304)
T 2jam_A 154 GLSKMEQNG----------IMSTACGTPGYVAPEVLA 180 (304)
T ss_dssp STTCCCCCB----------TTHHHHSCCCBCCTTTBS
T ss_pred CcceecCCC----------ccccccCCCCccChHHhc
Confidence 998754221 112246999999999863
No 209
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.95 E-value=9.9e-28 Score=245.53 Aligned_cols=170 Identities=24% Similarity=0.424 Sum_probs=147.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK----- 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC-----
Confidence 457899999999999999999999999999999996532 233567899999999999999999999976554
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 7899999999999999998654 588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|++....... .....||+.|+|||++.
T Consensus 159 g~~~~~~~~~----------~~~~~~~~~y~aPE~~~ 185 (284)
T 2vgo_A 159 GWSVHAPSLR----------RRTMCGTLDYLPPEMIE 185 (284)
T ss_dssp TTCEECSSSC----------BCCCCSCGGGCCHHHHT
T ss_pred cccccCcccc----------cccccCCCCcCCHHHhc
Confidence 9987653221 11256999999999753
No 210
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.95 E-value=1.3e-27 Score=245.49 Aligned_cols=171 Identities=27% Similarity=0.435 Sum_probs=145.0
Q ss_pred CCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 533 ~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.|...+.||+|+||.||+|++..++..||+|++.... ....+.+.+|++++++++||||+++++++.... ......+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCceEE
Confidence 4677788999999999999999999999999997543 334577899999999999999999999876532 2345789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeec-CCCceEEccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLD-HDMVAHVGDF 687 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivHrdlkp~Nill~-~~~~~kl~Df 687 (725)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+||
T Consensus 106 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Df 176 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCT
T ss_pred EEEEecCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeC
Confidence 9999999999999997653 588999999999999999999998 6 99999999999998 7899999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+..... ......||+.|+|||++
T Consensus 177 g~~~~~~~~----------~~~~~~~t~~y~aPE~~ 202 (290)
T 1t4h_A 177 GLATLKRAS----------FAKAVIGTPEFMAPEMY 202 (290)
T ss_dssp TGGGGCCTT----------SBEESCSSCCCCCGGGG
T ss_pred CCccccccc----------ccccccCCcCcCCHHHH
Confidence 999754322 11235699999999975
No 211
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.95 E-value=1.8e-28 Score=255.95 Aligned_cols=171 Identities=25% Similarity=0.431 Sum_probs=138.2
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccc-hHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
++|+..+.||+|+||.||+|++..+++.||+|++...... ....+.+|++++++++||||+++++++.... ..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS-----CEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC-----EEE
Confidence 5788999999999999999999999999999999754321 2224567999999999999999999976554 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 77 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEecccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 9999997 599999886542 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+....... .....+||+.|+|||++.
T Consensus 148 ~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 173 (324)
T 3mtl_A 148 RAKSIPTK--------TYDNEVVTLWYRPPDILL 173 (324)
T ss_dssp ECC--------------------CGGGCCHHHHT
T ss_pred ccccCCcc--------ccccccCcccccChhhhc
Confidence 76533211 112246899999999863
No 212
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=9.8e-28 Score=248.62 Aligned_cols=174 Identities=22% Similarity=0.308 Sum_probs=142.2
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc---chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
..++|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~---- 107 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG---- 107 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC----
Confidence 45789999999999999999999998999999999975432 23477899999999999999999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 108 -~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~D 177 (309)
T 2h34_A 108 -QLYVDMRLINGVDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVD 177 (309)
T ss_dssp -EEEEEEECCCCEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECS
T ss_pred -eEEEEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEec
Confidence 7899999999999999998654 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+++........ ......||+.|+|||++.
T Consensus 178 fg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~ 208 (309)
T 2h34_A 178 FGIASATTDEKLT-------QLGNTVGTLYYMAPERFS 208 (309)
T ss_dssp CCC-----------------------CCGGGCCGGGTC
T ss_pred CccCccccccccc-------cccccCCCcCccCHHHHc
Confidence 9999765432111 111256999999999863
No 213
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.1e-28 Score=255.81 Aligned_cols=253 Identities=18% Similarity=0.215 Sum_probs=207.4
Q ss_pred ccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCC-ccCCCCCC-------CCCCCCEEEccCCcccccCccc
Q 048668 9 IGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLG-GKFPTTLG-------LLRNLVQLNVAENKFYGMFPRS 80 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~ 80 (725)
++..++|++|++++|.+ .+|..+... |++|+|++|+++ ...|..+. ++++|++|+|++|++++..|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 46677899999999999 678776654 999999999994 34565554 6899999999999999888887
Q ss_pred c--cccCCCceeeccCCCCCCCCChhhhcCC-----CCccEEEccCceeeeeCCCcccccCccceecCCCcccccc---C
Q 048668 81 I--CNISSLEYFYLTSNRFSGSLPFDIVVNL-----PNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGK---V 150 (725)
Q Consensus 81 ~--~~l~~L~~L~L~~N~l~~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~---~ 150 (725)
+ ..+++|++|+|++|+++ .+| ..+..+ ++|++|+|++|+++++.+..|+.+++|++|+|++|++.+. +
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~-~~~-~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWA-TRD-AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCS-SSS-SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCc-chh-HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 6 89999999999999998 456 344555 8999999999999999889999999999999999997653 1
Q ss_pred -ccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceecc
Q 048668 151 -SIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTI 229 (725)
Q Consensus 151 -~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~ 229 (725)
...|..+++|++|++++|.++.++.. ....+.++++|++|+|++|++++..|.........|+.|++++|.++ .+
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~i 268 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGV---CSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QV 268 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHH---HHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SC
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHH---HHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hh
Confidence 22348899999999999999743220 11334678999999999999998775443333348999999999999 77
Q ss_pred CcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCccccc
Q 048668 230 PLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQG 275 (725)
Q Consensus 230 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 275 (725)
|..+. ++|++|+|++|+|++. |. +..+++|++|++++|.+++
T Consensus 269 p~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 269 PKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 87776 8999999999999987 55 8999999999999999875
No 214
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=245.29 Aligned_cols=172 Identities=24% Similarity=0.383 Sum_probs=143.4
Q ss_pred CCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeEE
Q 048668 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALV 612 (725)
Q Consensus 533 ~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 612 (725)
+|.....||+|+||.||+|++..+++.||||++........+.+.+|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-----FIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-----cEEEE
Confidence 4455569999999999999999999999999998765556678999999999999999999999987654 78999
Q ss_pred EeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC-CCceEEccccccc
Q 048668 613 FEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVGDFGLAK 691 (725)
Q Consensus 613 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~-~~~~kl~Dfgla~ 691 (725)
|||+++++|.+++..... ....++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 98 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EECCSEEEHHHHHHHTTC---CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEeCCCCCHHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 999999999999986532 12467888999999999999999999 9999999999999987 8999999999998
Q ss_pred ccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 692 FLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
....... ......||+.|+|||++
T Consensus 172 ~~~~~~~--------~~~~~~~~~~y~aPE~~ 195 (295)
T 2clq_A 172 RLAGINP--------CTETFTGTLQYMAPEII 195 (295)
T ss_dssp ESCC-------------CCCCCCGGGCCHHHH
T ss_pred ccCCCCC--------cccccCCCccccChhhh
Confidence 7643211 11125699999999975
No 215
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.95 E-value=1.3e-27 Score=246.54 Aligned_cols=171 Identities=29% Similarity=0.413 Sum_probs=147.5
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc---------chHHHHHHHHHHHHcCC-CCcccceeeEee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---------GAFRSFVAECEALRNIR-HRNLIKIITICS 599 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 599 (725)
..++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 45689999999999999999999999999999999975431 22457889999999996 999999999976
Q ss_pred cCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC
Q 048668 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD 679 (725)
Q Consensus 600 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~ 679 (725)
... ..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 95 ~~~-----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 95 TNT-----FFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDD 160 (298)
T ss_dssp CSS-----EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred cCC-----eEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCC
Confidence 544 7899999999999999998653 589999999999999999999999 99999999999999999
Q ss_pred CceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 680 MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 680 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+.+||+|||+++....... .....||+.|+|||++
T Consensus 161 ~~~kl~dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~ 195 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEK---------LREVCGTPSYLAPEII 195 (298)
T ss_dssp CCEEECCCTTCEECCTTCC---------BCCCCSCGGGCCHHHH
T ss_pred CcEEEecccchhhcCCCcc---------cccccCCccccCHHHh
Confidence 9999999999987643211 1225699999999975
No 216
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.95 E-value=4.3e-28 Score=257.43 Aligned_cols=184 Identities=20% Similarity=0.314 Sum_probs=144.7
Q ss_pred HhcCCCCCcccccccceEEEEEEECCC-----ceEEEEEEeeccccch-----------HHHHHHHHHHHHcCCCCcccc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGED-----EMIVAVKVINLKQKGA-----------FRSFVAECEALRNIRHRNLIK 593 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 593 (725)
..++|+..+.||+|+||.||+|++..+ ++.||||++....... ...+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 345899999999999999999998754 5789999987543211 123456777788889999999
Q ss_pred eeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 048668 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSN 673 (725)
Q Consensus 594 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~N 673 (725)
+++++.... .+..+.|+||||+ |++|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEANAK-----RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 999987642 2334689999999 9999999986532 589999999999999999999999 99999999999
Q ss_pred eeec--CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 674 VLLD--HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 674 ill~--~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+++ .++.+||+|||+|+.+......... ........+||+.|||||++.
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~ 234 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAY-AADPKRCHDGTIEFTSIDAHN 234 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCS-SCCSSCCCCCCTTTCCHHHHT
T ss_pred EEEecCCCCeEEEEECCcceecccCCccccc-ccCcccccCCCCCccCHHHhC
Confidence 9999 8899999999999877544322111 111223456999999999863
No 217
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.95 E-value=3.1e-28 Score=253.06 Aligned_cols=188 Identities=26% Similarity=0.458 Sum_probs=139.5
Q ss_pred HHHHhcCCCCCcccccccceEEEEEEECC---CceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecC
Q 048668 527 LSKATSEFSSSNMIGQGSFGSVYKGILGE---DEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSST 601 (725)
Q Consensus 527 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 601 (725)
+....++|...+.||+|+||.||+|++.. ++..||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 33445678889999999999999998754 56789999997543 33456789999999999999999999998776
Q ss_pred CCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc
Q 048668 602 DFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 681 (725)
Q Consensus 602 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~ 681 (725)
...+....++||||+++|+|.+++...........+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 5443445699999999999999996443222233689999999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||+++......... ......|++.|+|||++
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~ 221 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYR------QGRIAKMPVKWIAIESL 221 (313)
T ss_dssp EEECSCSCC----------------------CCGGGSCHHHH
T ss_pred EEEeecCcceecccccccC------cccccCCCccccCchhh
Confidence 9999999998764332111 11124588999999975
No 218
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=6.7e-28 Score=254.10 Aligned_cols=180 Identities=26% Similarity=0.439 Sum_probs=145.0
Q ss_pred HhcCCCCCcccccccceEEEEEEE-----CCCceEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCcccceeeEeecCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICSSTD 602 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 602 (725)
..++|+..+.||+|+||.||+|++ ..++..||||++.... ....+.+.+|+++++++ +||||+++++++....
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456888999999999999999997 3467789999997542 33457899999999999 8999999999976544
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCcc-----------------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQV-----------------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMV 665 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv 665 (725)
..|+||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+
T Consensus 123 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 123 -----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp -----SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred -----ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 7899999999999999998654210 012478999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 666 HGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 666 Hrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||||||+||+++.++.+||+|||+|+........ .......||+.|+|||++
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~ 246 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY------VVRGNARLPVKWMAPESL 246 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTS------EEETTEEECGGGCCHHHH
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccc------eeccCccCccCccCHHHh
Confidence 9999999999999999999999999876443211 112234588999999975
No 219
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.95 E-value=7.4e-28 Score=252.21 Aligned_cols=172 Identities=26% Similarity=0.402 Sum_probs=142.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++.... .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-----R 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-----E
Confidence 4578999999999999999999999999999999865432 23456889999999999999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||++++++.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCcchHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 899999999999988876543 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+++....... ......||+.|+|||++.
T Consensus 170 ~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~ 197 (331)
T 4aaa_A 170 FARTLAAPGE--------VYDDEVATRWYRAPELLV 197 (331)
T ss_dssp TC--------------------CCCCCTTCCHHHHT
T ss_pred CceeecCCcc--------ccCCCcCCccccCccccc
Confidence 9986543211 111246999999999763
No 220
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.95 E-value=1.1e-27 Score=261.33 Aligned_cols=168 Identities=35% Similarity=0.477 Sum_probs=141.9
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..++|+..+.||+|+||.||+|++. ++.||||+++... ..+.|.+|++++++++||||+++++++.... ...
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT----SCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC----Cce
Confidence 3467888899999999999999985 6799999997543 4578999999999999999999999976543 368
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 335 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 335 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCC
Confidence 999999999999999986542 1478999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+...... ....+|+.|+|||++
T Consensus 336 a~~~~~~~-----------~~~~~~~~y~aPE~~ 358 (450)
T 1k9a_A 336 TKEASSTQ-----------DTGKLPVKWTAPEAL 358 (450)
T ss_dssp CEECC-----------------CCCTTTSCHHHH
T ss_pred cccccccc-----------cCCCCCcceeCHHHh
Confidence 98542210 113578899999975
No 221
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.95 E-value=4.9e-28 Score=248.36 Aligned_cols=174 Identities=26% Similarity=0.550 Sum_probs=148.8
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..++|+..+.||+|+||.||+|++..++..||+|++... ....+++.+|++++++++||||+++++++.... ..
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CE
Confidence 456788999999999999999999988999999999754 334578999999999999999999999976544 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred EEEEEcCCCCcHHHHHHhccc----CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcc
Confidence 999999999999999986542 2589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+....... .......||+.|+|||++
T Consensus 158 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~ 184 (288)
T 3kfa_A 158 SRLMTGDTY-------TAHAGAKFPIKWTAPESL 184 (288)
T ss_dssp GGTSCSSSS-------EEETTEEECGGGCCHHHH
T ss_pred ceeccCCcc-------ccccCCccccCcCChhhh
Confidence 987643211 112234578899999975
No 222
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.95 E-value=1.7e-27 Score=246.25 Aligned_cols=170 Identities=28% Similarity=0.439 Sum_probs=148.1
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
+.|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ..|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 96 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KLW 96 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eEE
Confidence 46888999999999999999999899999999997653 345678999999999999999999999987654 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 97 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp EEEECCTTEEHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccc
Confidence 999999999999999643 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+....... ......||+.|+|||++.
T Consensus 167 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~ 192 (303)
T 3a7i_A 167 GQLTDTQI--------KRNTFVGTPFWMAPEVIK 192 (303)
T ss_dssp EECBTTBC--------CBCCCCSCGGGCCHHHHT
T ss_pred eecCcccc--------ccCccCCCcCccCHHHHh
Confidence 87643321 112356999999999863
No 223
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.95 E-value=3.4e-28 Score=251.38 Aligned_cols=173 Identities=23% Similarity=0.352 Sum_probs=144.6
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..+.|++.+.||+|+||.||+|++..+++.||+|++........+++.+|++++++++||||+++++++.... ..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-----KL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-----eE
Confidence 3457899999999999999999999899999999998766666788999999999999999999999987654 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 92 ~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 163 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLELDR-----GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 163 (302)
T ss_dssp EEEEECCTTEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHH
T ss_pred EEEEEeCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCC
Confidence 999999999999999876432 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+........ ......||+.|+|||++
T Consensus 164 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~ 189 (302)
T 2j7t_A 164 SAKNLKTLQ--------KRDSFIGTPYWMAPEVV 189 (302)
T ss_dssp HHHHHHHHH--------C-----CCGGGCCHHHH
T ss_pred Ccccccccc--------ccccccCChhhcCCeee
Confidence 864322110 01124699999999976
No 224
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.95 E-value=4.9e-28 Score=247.34 Aligned_cols=172 Identities=24% Similarity=0.424 Sum_probs=133.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCC---ceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||.||+|++..+ +..||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 45788899999999999999998643 4579999986543 3345678999999999999999999998732
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
+..|+||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CccEEEEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 257899999999999999976532 588999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+........ ......+|+.|+|||++
T Consensus 160 fg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 189 (281)
T 1mp8_A 160 FGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 189 (281)
T ss_dssp --------------------------CCGGGCCHHHH
T ss_pred cccccccCccccc-------ccccCCCcccccChhhc
Confidence 9999876433211 11123578899999975
No 225
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.95 E-value=1.3e-27 Score=252.93 Aligned_cols=182 Identities=26% Similarity=0.368 Sum_probs=148.6
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... .....++.+|++++++++||||+++++++....+......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 457899999999999999999999999999999996443 2345678899999999999999999999877666666788
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||++ |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccC-ccHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 99999997 5999998753 488999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCC--CCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSS--KTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+........... .........+||+.|+|||++
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 194 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeee
Confidence 9876543211110 001112235799999999975
No 226
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.95 E-value=6.2e-28 Score=246.99 Aligned_cols=174 Identities=25% Similarity=0.482 Sum_probs=145.8
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCC------
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDF------ 603 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 603 (725)
...+|+..+.||+|+||.||+|++..+++.||+|++.... +.+.+|++++++++||||+++++++....+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3457899999999999999999999899999999997543 346689999999999999999998754211
Q ss_pred -----CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC
Q 048668 604 -----KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 678 (725)
Q Consensus 604 -----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~ 678 (725)
......|+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 123457999999999999999975431 2588999999999999999999999 9999999999999999
Q ss_pred CCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 679 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++.+||+|||+++....... .....||+.|+|||++
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~ 193 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGK---------RTRSKGTLRYMSPEQI 193 (284)
T ss_dssp TTEEEECCCTTCEESSCCSC---------CCCCCSCCTTSCHHHH
T ss_pred CCCEEECcchhheecccccc---------ccccCCcccccChhhh
Confidence 99999999999987643311 1124699999999975
No 227
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.95 E-value=5.2e-28 Score=256.57 Aligned_cols=170 Identities=22% Similarity=0.363 Sum_probs=146.4
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..|
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 107 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EIS 107 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-----EEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-----EEE
Confidence 57888999999999999999999999999999997653 334578899999999999999999999987654 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+|
T Consensus 108 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEECCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 9999999999999998654 5889999999999999999999831 7999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+...... .....||+.|+|||++.
T Consensus 180 ~~~~~~~----------~~~~~gt~~y~aPE~~~ 203 (360)
T 3eqc_A 180 GQLIDSM----------ANSFVGTRSYMSPERLQ 203 (360)
T ss_dssp HHHHHHC--------------CCCCTTCCHHHHT
T ss_pred ccccccc----------ccCCCCCCCeECHHHHc
Confidence 7654321 11246999999999863
No 228
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.95 E-value=9.9e-28 Score=247.92 Aligned_cols=186 Identities=25% Similarity=0.368 Sum_probs=144.4
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCC-------
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTD------- 602 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 602 (725)
..++|+..+.||+|+||.||+|++..+++.||||++... ....+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 346789999999999999999999989999999999643 234577899999999999999999999876532
Q ss_pred -CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc
Q 048668 603 -FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 681 (725)
Q Consensus 603 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~ 681 (725)
.......|+||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENL-----NQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCG-----GGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcccc-----ccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 1234578999999999999999986432 578889999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccCCCCCC------CCCCcccccccCCccccCCCccc
Q 048668 682 AHVGDFGLAKFLSSHHLDTS------SKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 682 ~kl~Dfgla~~~~~~~~~~~------~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+||+|||+++.......... ...........||+.|+|||++.
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 203 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD 203 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHT
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCccccc
Confidence 99999999986543210000 00011122356999999999753
No 229
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.95 E-value=1.3e-27 Score=250.56 Aligned_cols=180 Identities=23% Similarity=0.433 Sum_probs=145.2
Q ss_pred HhcCCCCCcccccccceEEEEEEEC-------CCceEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCcccceeeEeec
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILG-------EDEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICSS 600 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 600 (725)
..++|+..+.||+|+||.||+|++. .++..||||++.... ....+++.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3468889999999999999999975 356789999997543 33457789999999999 89999999999765
Q ss_pred CCCCCcceeeEEEeccCCCCHHHHhcccCCcc----------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 048668 601 TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQV----------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLK 670 (725)
Q Consensus 601 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlk 670 (725)
.. ..|+||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+|||||
T Consensus 113 ~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlk 184 (334)
T 2pvf_A 113 DG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLA 184 (334)
T ss_dssp SS-----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred CC-----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCc
Confidence 44 7899999999999999998654210 112488999999999999999999999 99999999
Q ss_pred CCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 671 PSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 671 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+||+++.++.+||+|||+++........ .......||+.|+|||++
T Consensus 185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 231 (334)
T 2pvf_A 185 ARNVLVTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEAL 231 (334)
T ss_dssp GGGEEECTTCCEEECCCTTCEECTTTSSE------ECCSCCCCCGGGCCHHHH
T ss_pred cceEEEcCCCCEEEccccccccccccccc------cccCCCCcccceeChHHh
Confidence 99999999999999999999876433211 111124578999999975
No 230
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.95 E-value=1.2e-27 Score=246.75 Aligned_cols=177 Identities=26% Similarity=0.493 Sum_probs=142.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCC---ceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
...|+..+.||+|+||.||+|++..+ ...||+|.+.... ....+++.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE---- 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC----
Confidence 34678889999999999999997533 3468999886533 344578999999999999999999999875433
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 171 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVAD 171 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECS
T ss_pred CceEEEEeCCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECc
Confidence 467899999999999999976432 578999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+......... ........||+.|+|||++
T Consensus 172 fg~a~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~ 204 (298)
T 3f66_A 172 FGLARDMYDKEYYS----VHNKTGAKLPVKWMALESL 204 (298)
T ss_dssp CGGGCCCSCGGGCB----C-----CCBCGGGSCHHHH
T ss_pred ccccccccccchhc----cccccCCCCCccccChHHh
Confidence 99998764432111 1112235688999999975
No 231
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.95 E-value=7.3e-28 Score=263.06 Aligned_cols=173 Identities=23% Similarity=0.483 Sum_probs=144.8
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
...++|+..+.||+|+||.||+|++. ++..||||+++... ...++|.+|++++++++||||+++++++.. +.
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~ 256 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EP 256 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC------Cc
Confidence 34567888999999999999999986 56789999997543 346789999999999999999999998752 25
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+++|+|.++++... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG 329 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFG 329 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTT
T ss_pred cEEEEeecCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCC
Confidence 799999999999999997542 12578889999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+........ ......+|+.|+|||++
T Consensus 330 ~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 357 (454)
T 1qcf_A 330 LARVIEDNEYT-------AREGAKFPIKWTAPEAI 357 (454)
T ss_dssp GGGGBCCHHHH-------TTCSSSSCGGGSCHHHH
T ss_pred CceEcCCCcee-------ccCCCcccccccCHHHh
Confidence 99876432111 11123478899999975
No 232
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.95 E-value=4.9e-28 Score=253.11 Aligned_cols=183 Identities=25% Similarity=0.377 Sum_probs=146.9
Q ss_pred HHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCC
Q 048668 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFK 604 (725)
Q Consensus 526 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 604 (725)
.+....++|+..+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+++++++ +||||+++++++......
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 333456789999999999999999999998999999999975432 346788999999999 799999999998764321
Q ss_pred C-cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 605 G-VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 605 ~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
+ .+..|+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred cccceEEEEEEcCCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 1 3478999999999999999986531 2588999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|||+++....... ......||+.|+|||++.
T Consensus 170 l~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~ 202 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVG--------RRNTFIGTPYWMAPEVIA 202 (326)
T ss_dssp ECCCTTTC---------------------CCGGGCCHHHHC
T ss_pred EeeCcCceecCcCcc--------ccccccCCccccChhhhc
Confidence 999999976543211 111246999999999863
No 233
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=5.6e-28 Score=256.46 Aligned_cols=175 Identities=26% Similarity=0.515 Sum_probs=133.0
Q ss_pred CCCCCcccccccceEEEEEEECCC---ceEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 533 EFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 533 ~~~~~~~ig~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.|+..+.||+|+||.||+|++..+ +..||+|.++.. .....++|.+|++++++++||||++++++|...+ +.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----GS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS----SC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----CC
Confidence 456678999999999999987432 356899998643 3345678999999999999999999999875433 46
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.++||||+++|+|.++++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred eEEEEECCCCCCHHHHHhhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecc
Confidence 7899999999999999976542 478889999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+.+....... ........||+.|+|||++
T Consensus 238 ~a~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~ 268 (373)
T 3c1x_A 238 LARDMYDKEFDS----VHNKTGAKLPVKWMALESL 268 (373)
T ss_dssp ------------------------CCGGGSCHHHH
T ss_pred cccccccccccc----ccccCCCCCcccccChHHh
Confidence 998764332111 1112234588999999975
No 234
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.95 E-value=9.1e-28 Score=249.52 Aligned_cols=180 Identities=24% Similarity=0.416 Sum_probs=147.5
Q ss_pred HhcCCCCCcccccccceEEEEEEE-----CCCceEEEEEEeecccc-chHHHHHHHHHHHHcC-CCCcccceeeEeecCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQK-GAFRSFVAECEALRNI-RHRNLIKIITICSSTD 602 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 602 (725)
..++|+..+.||+|+||.||+|++ ..+++.||||++..... ...+.+.+|+++++++ +||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346788999999999999999985 45788999999975532 3457889999999999 8999999999976554
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCc------------cccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQ------------VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLK 670 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlk 670 (725)
..++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+|||||
T Consensus 101 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 101 -----PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp -----SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred -----CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 789999999999999999865421 0112489999999999999999999999 99999999
Q ss_pred CCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 671 PSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 671 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+||+++.++.+||+|||+++........ .......||+.|+|||++
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 219 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNY------VVKGNARLPVKWMAPESI 219 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTS------EECSSSEECGGGCCHHHH
T ss_pred cceEEEcCCCCEEEccccccccccccccc------eeccCCCCcceeeChHHh
Confidence 99999999999999999999876443211 111224588999999975
No 235
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.95 E-value=2.3e-27 Score=244.56 Aligned_cols=177 Identities=21% Similarity=0.307 Sum_probs=146.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++++ +|++++++++++.... ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-----~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-----HN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-----EE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-----ee
Confidence 457899999999999999999998899999999986443 224577899999999 6999999999976554 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc-----eEE
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-----AHV 684 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~-----~kl 684 (725)
++||||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred EEEEEec-CCCHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 9999999 9999999986542 589999999999999999999998 9999999999999987775 999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|||+|+........... .........||+.|+|||++.
T Consensus 153 ~Dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~ 191 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQHI-PYREKKNLSGTARYMSINTHL 191 (298)
T ss_dssp CCCTTCEESBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHT
T ss_pred EECccccccccccccccc-cccCccCCCCCcccCCchhhc
Confidence 999999876543221110 111223467999999999863
No 236
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=1.2e-27 Score=255.75 Aligned_cols=177 Identities=22% Similarity=0.293 Sum_probs=140.1
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCC-----
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDF----- 603 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 603 (725)
...++|+..+.||+|+||+||+|++..+++.||||++..+... ..+|+++++.++||||+++++++.....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3556899999999999999999999999999999998654322 2379999999999999999999855331
Q ss_pred ----------------------------CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHH
Q 048668 604 ----------------------------KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEY 655 (725)
Q Consensus 604 ----------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 655 (725)
....+.++||||++ |+|.+.+..... ....+++..+..++.|++.||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR--SGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHH
Confidence 22345889999997 588877764211 01268999999999999999999
Q ss_pred HHhcCCCCcEecCCCCCCeeec-CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 656 LHHHCQPPMVHGDLKPSNVLLD-HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 656 lH~~~~~~ivHrdlkp~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+. +|+||||||+||+++ .++.+||+|||+|+....... .....||+.|+|||++.
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---------~~~~~~t~~y~aPE~~~ 214 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---------SVAYICSRFYRAPELML 214 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---------CCCCCCCSSCCCHHHHT
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---------CcCcccCCCccCHHHhc
Confidence 9998 999999999999998 688999999999987643321 11256899999999764
No 237
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.95 E-value=1.7e-27 Score=252.94 Aligned_cols=182 Identities=23% Similarity=0.287 Sum_probs=144.5
Q ss_pred HHHHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc-----------chHHHHHHHHHHHHcCCCCccc
Q 048668 524 YAELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-----------GAFRSFVAECEALRNIRHRNLI 592 (725)
Q Consensus 524 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 592 (725)
..++....++|+..+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++++++||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4566777899999999999999999999986 489999999864321 1237889999999999999999
Q ss_pred ceeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 048668 593 KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPS 672 (725)
Q Consensus 593 ~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~ 672 (725)
++++++...........|+||||++ |++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 163 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI-----VISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPG 163 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChH
Confidence 9999986654344457899999997 689888875432 589999999999999999999999 9999999999
Q ss_pred CeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 673 NVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 673 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+++.++.+||+|||+|+...... ......||+.|+|||++.
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~ 206 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADA---------NKTHYVTHRWYRAPELVM 206 (362)
T ss_dssp GEEECTTCCEEECCTTC------------------------CGGGCCHHHHT
T ss_pred HEEEcCCCCEEEEecCccccccccc---------ccceecccceecCcHHhc
Confidence 9999999999999999997543321 112256999999999763
No 238
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.95 E-value=1.1e-27 Score=256.23 Aligned_cols=169 Identities=25% Similarity=0.435 Sum_probs=139.8
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCC--CCcccceeeEeecCCCCCcc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIR--HRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~ 607 (725)
..|+..+.||+|+||.||+|.+.. ++.||||++.... ....+.+.+|++++++++ ||||+++++++....
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~----- 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----- 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC-----
Confidence 458899999999999999999874 8899999997553 334578899999999997 599999999987654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+||
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DF 198 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDF 198 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCC
T ss_pred EEEEEEe-cCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEec
Confidence 7899999 56889999998654 578889999999999999999999 999999999999995 579999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|+.+...... ......+||+.|||||++
T Consensus 199 G~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 228 (390)
T 2zmd_A 199 GIANQMQPDTTS------VVKDSQVGAVNYMPPEAI 228 (390)
T ss_dssp SSSCCC---------------CCSCCCGGGCCHHHH
T ss_pred CccccccCCCcc------ccCCCCCcCCCccChHHh
Confidence 999876433211 111235799999999986
No 239
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=252.33 Aligned_cols=170 Identities=25% Similarity=0.437 Sum_probs=139.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCC--CcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRH--RNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~ 606 (725)
...|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++| |||+++++++....
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~---- 82 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---- 82 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC----
Confidence 356889999999999999999985 68899999997543 2345778999999999986 99999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+|||| .+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|
T Consensus 83 -~~~lv~e~-~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 83 -YIYMVMEC-GNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp -EEEEEECC-CSEEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECC
T ss_pred -EEEEEEeC-CCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEee
Confidence 78999995 5889999998754 588999999999999999999999 999999999999997 57899999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+........ ......+||+.|+|||++
T Consensus 151 FG~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 181 (343)
T 3dbq_A 151 FGIANQMQPDTTS------VVKDSQVGTVNYMPPEAI 181 (343)
T ss_dssp CSSSCCC------------------CCCCSSCCHHHH
T ss_pred cccccccCccccc------ccCCCCcCCcCcCCHHHH
Confidence 9999876433211 111235799999999986
No 240
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=248.73 Aligned_cols=177 Identities=27% Similarity=0.460 Sum_probs=146.8
Q ss_pred hcCCCCCcccccccceEEEEEEE----CCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGIL----GEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
..+|+..+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.... .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---C
Confidence 35688899999999999999984 5688999999998766666678999999999999999999999876432 2
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred CceEEEEECCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEec
Confidence 367899999999999999986542 588999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+......... .......||..|+|||++
T Consensus 189 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 220 (326)
T 2w1i_A 189 FGLTKVLPQDKEYY-----KVKEPGESPIFWYAPESL 220 (326)
T ss_dssp CTTCEECCSSCSEE-----ECSSCCSCCGGGCCHHHH
T ss_pred Ccchhhcccccccc-----ccccCCCCceeEECchhh
Confidence 99998764332110 011124578899999975
No 241
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.94 E-value=1.7e-27 Score=248.96 Aligned_cols=179 Identities=21% Similarity=0.287 Sum_probs=146.4
Q ss_pred HHHHHHhcCCCCC-cccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCC-CCcccceeeEeec
Q 048668 525 AELSKATSEFSSS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIR-HRNLIKIITICSS 600 (725)
Q Consensus 525 ~~~~~~~~~~~~~-~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 600 (725)
+......+.|... +.||+|+||.||+|++..+++.||+|++.... .....++.+|+.+++++. ||||+++++++..
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344455567776 88999999999999999999999999997542 334678899999999995 6999999999765
Q ss_pred CCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC--
Q 048668 601 TDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH-- 678 (725)
Q Consensus 601 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~-- 678 (725)
.. ..|+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 101 ~~-----~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~ 168 (327)
T 3lm5_A 101 TS-----EIILILEYAAGGEIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIY 168 (327)
T ss_dssp SS-----EEEEEEECCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBT
T ss_pred CC-----eEEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCC
Confidence 54 78999999999999999865432 2589999999999999999999999 9999999999999998
Q ss_pred -CCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 679 -DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 679 -~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
++.+||+|||+|+....... ....+||+.|+|||++.
T Consensus 169 ~~~~~kL~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~ 206 (327)
T 3lm5_A 169 PLGDIKIVDFGMSRKIGHACE---------LREIMGTPEYLAPEILN 206 (327)
T ss_dssp TBCCEEECCGGGCEEC------------------CCCGGGCCHHHHT
T ss_pred CCCcEEEeeCccccccCCccc---------cccccCCcCccCCeeec
Confidence 78999999999987643211 11256999999999863
No 242
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.94 E-value=7.6e-28 Score=254.98 Aligned_cols=172 Identities=23% Similarity=0.366 Sum_probs=129.7
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCC-CCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTD-FKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+|+.||||++.... ....+++.+|++++++++||||+++++++.... +....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999999999999999996532 234567889999999999999999999986542 22334
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCEEEEECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-
T ss_pred eEEEEeccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeec
Confidence 679999999 78999988652 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+..... ....+||+.|+|||++.
T Consensus 177 G~a~~~~~~-----------~~~~~~t~~y~aPE~~~ 202 (367)
T 2fst_X 177 GLARHTADE-----------MTGYVATRWYRAPEIML 202 (367)
T ss_dssp -------------------------CCCTTCCHHHHT
T ss_pred ccccccccc-----------CCCcCcCcCccChHHHc
Confidence 999865321 11257999999999863
No 243
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.94 E-value=3.3e-27 Score=245.45 Aligned_cols=171 Identities=27% Similarity=0.420 Sum_probs=142.4
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..+.|+..+.||+|+||.||+|++..+++.||+|++.... ..+++.+|++++++++||||+++++++.... ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT-----DL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EE
Confidence 4567999999999999999999999899999999997543 3467899999999999999999999987654 78
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNK-----TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEeecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 999999999999999974332 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++....... ......||+.|+|||++
T Consensus 172 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~ 197 (314)
T 3com_A 172 AGQLTDTMA--------KRNTVIGTPFWMAPEVI 197 (314)
T ss_dssp CEECBTTBS--------CBCCCCSCGGGCCHHHH
T ss_pred chhhhhhcc--------ccCccCCCCCccChhhc
Confidence 987643211 11235699999999975
No 244
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=2e-27 Score=240.84 Aligned_cols=171 Identities=29% Similarity=0.492 Sum_probs=145.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++. +++.||+|++..... ..+++.+|++++++++||||+++++++.... ..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CeE
Confidence 457888999999999999999987 677899999975543 3468899999999999999999999976544 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEeCCCCCcHHHHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccc
Confidence 99999999999999976532 578999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+........ ......||+.|+|||++
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 177 (267)
T 3t9t_A 152 RFVLDDQYT-------SSTGTKFPVKWASPEVF 177 (267)
T ss_dssp GGBCCHHHH-------STTSTTCCGGGCCHHHH
T ss_pred ccccccccc-------ccccccccccccChhhh
Confidence 865432111 11124578899999975
No 245
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=3.1e-28 Score=259.70 Aligned_cols=177 Identities=16% Similarity=0.201 Sum_probs=136.2
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc---ccchHHHHHHHH---HHHHcCCCCccccee-------eE
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFRSFVAEC---EALRNIRHRNLIKII-------TI 597 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 597 (725)
.++|+..+.||+|+||.||+|++..+++.||||++... .....+.+.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35688889999999999999999889999999999743 334567889999 555566899999998 44
Q ss_pred eecCCC-------CCcc-----eeeEEEeccCCCCHHHHhcccCCccc-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 048668 598 CSSTDF-------KGVD-----FKALVFEYMGNGSLEDWLHQSNDQVE-VCKLSLIQRLNIAIDVASAIEYLHHHCQPPM 664 (725)
Q Consensus 598 ~~~~~~-------~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 664 (725)
+..... .+.+ ..|+||||+ +|+|.+++.......+ ...+++..++.|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 433210 0111 268999999 6799999986431110 11344688889999999999999999 99
Q ss_pred EecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 665 VHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 665 vHrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~ 274 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------RVVSSVS-RGFEPPELE 274 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----------EEECCCC-TTCCCHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----------cccCCCC-cCccChhhh
Confidence 9999999999999999999999999985322 1123568 999999986
No 246
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.94 E-value=4.2e-27 Score=243.51 Aligned_cols=176 Identities=23% Similarity=0.411 Sum_probs=145.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc----cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ----KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---K 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---C
Confidence 468999999999999999999999999999999997542 234578999999999999999999999975332 2
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
...|+||||++++ +.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CeEEEEehhccCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeec
Confidence 4689999999876 7777765432 2589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+++........ .......||+.|+|||++
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 183 (305)
T 2wtk_C 153 LGVAEALHPFAAD------DTCRTSQGSPAFQPPEIA 183 (305)
T ss_dssp CTTCEECCTTCSS------CEECCCCSCGGGCCHHHH
T ss_pred cccccccCccccc------cccccCCCCCCCcChhhc
Confidence 9999876432111 111235699999999975
No 247
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.94 E-value=2.2e-27 Score=241.19 Aligned_cols=169 Identities=27% Similarity=0.457 Sum_probs=132.2
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc----cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ----KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
.++|+..+.||+|+||.||+|++. +..||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 79 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP---- 79 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----
Confidence 357888999999999999999984 7889999987542 223577899999999999999999999976554
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC--------
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH-------- 678 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~-------- 678 (725)
..++||||+++++|.+++... .+++..++.++.|++.||+|||++...+|+||||||+||+++.
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~ 151 (271)
T 3dtc_A 80 -NLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCS
T ss_pred -ceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccccc
Confidence 789999999999999998643 5889999999999999999999982222999999999999986
Q ss_pred CCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 679 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++.+||+|||+++....... ....||+.|+|||++
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~y~aPE~~ 186 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTTK----------MSAAGAYAWMAPEVI 186 (271)
T ss_dssp SCCEEECCCCC-----------------------CCGGGSCHHHH
T ss_pred CcceEEccCCcccccccccc----------cCCCCccceeCHHHh
Confidence 67899999999986543211 124699999999975
No 248
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.94 E-value=1.4e-27 Score=249.19 Aligned_cols=169 Identities=28% Similarity=0.389 Sum_probs=140.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--------cchHHHHHHHHHHHHcCCCCcccceeeEeecCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--------KGAFRSFVAECEALRNIRHRNLIKIITICSSTD 602 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 602 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 457999999999999999999999999999999996432 11234588999999999999999999987543
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc-
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV- 681 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~- 681 (725)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 88 -----~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 88 -----DYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp -----SEEEEEECCTTEETHHHHSTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSS
T ss_pred -----ceEEEEecCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCC
Confidence 3789999999999999997654 589999999999999999999999 9999999999999987654
Q ss_pred --eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 --AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 --~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||+++..... .......||+.|+|||++
T Consensus 154 ~~~kl~Dfg~~~~~~~~---------~~~~~~~gt~~y~aPE~~ 188 (322)
T 2ycf_A 154 CLIKITDFGHSKILGET---------SLMRTLCGTPTYLAPEVL 188 (322)
T ss_dssp CCEEECCCTTCEECCCC---------HHHHHHHSCCTTCCHHHH
T ss_pred CeEEEccCccceecccc---------cccccccCCcCccCchhh
Confidence 999999999865322 111235699999999985
No 249
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=249.28 Aligned_cols=173 Identities=26% Similarity=0.462 Sum_probs=137.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEE----EEEEeecc-ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIV----AVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
.++|+..+.||+|+||.||+|++..+++.| |+|.+... .....+++.+|++++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 357899999999999999999998777655 66666433 334567899999999999999999999998754
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 90 --~~~~v~~~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~ 159 (327)
T 3lzb_A 90 --TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp --SEEEEECCCSSCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred --CceEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEc
Confidence 36799999999999999987543 588999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+|+........ .......||+.|+|||++
T Consensus 160 DfG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~ 191 (327)
T 3lzb_A 160 DFGLAKLLGAEEKE------YHAEGGKVPIKWMALESI 191 (327)
T ss_dssp CTTC----------------------CCCGGGSCHHHH
T ss_pred cCcceeEccCcccc------ccccCCCccccccCHHHH
Confidence 99999876433211 111224578899999975
No 250
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.94 E-value=7.9e-28 Score=250.34 Aligned_cols=188 Identities=21% Similarity=0.345 Sum_probs=151.0
Q ss_pred CHHHHHHHhcCCCCCcccccccceEEEEEEE-----CCCceEEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCccccee
Q 048668 523 SYAELSKATSEFSSSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKII 595 (725)
Q Consensus 523 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~ 595 (725)
+...+....++|+..+.||+|+||.||+|++ ..+++.||||++.... ....+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3445555567899999999999999999985 4577899999997543 23456789999999999 699999999
Q ss_pred eEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccc----------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 048668 596 TICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVE----------VCKLSLIQRLNIAIDVASAIEYLHHHCQPPMV 665 (725)
Q Consensus 596 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv 665 (725)
+++.... ...++||||+++|+|.+++........ ...+++..++.++.|++.||+|||+. +|+
T Consensus 98 ~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~ 170 (316)
T 2xir_A 98 GACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 170 (316)
T ss_dssp EEECCTT----SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEecCC----CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 9976543 358999999999999999986542110 11278899999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 666 HGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 666 Hrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||||||+||+++.++.+||+|||+++....... ........||+.|+|||++
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~ 222 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETI 222 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHH
T ss_pred cccCccceEEECCCCCEEECCCccccccccCcc------ceeccCCCcceeecCchhh
Confidence 999999999999999999999999986543211 1112235689999999975
No 251
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.94 E-value=5.2e-28 Score=252.44 Aligned_cols=184 Identities=24% Similarity=0.425 Sum_probs=148.4
Q ss_pred HHHHHhcCCCCCcccccccceEEEEEEEC-----CCceEEEEEEeecccc-chHHHHHHHHHHHHcCCCCcccceeeEee
Q 048668 526 ELSKATSEFSSSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICS 599 (725)
Q Consensus 526 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 599 (725)
++....++|+..+.||+|+||.||+|++. .+++.||+|++..... ....++.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34445678999999999999999999875 3578899999975432 34457899999999999999999999976
Q ss_pred cCCCCCcceeeEEEeccCCCCHHHHhcccCCcc----ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCee
Q 048668 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQV----EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 675 (725)
Q Consensus 600 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nil 675 (725)
... ..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 99 ~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 99 QGQ-----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp SSS-----SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred cCC-----ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 544 7899999999999999997532110 012468899999999999999999999 9999999999999
Q ss_pred ecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 676 LDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 676 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++.++.+||+|||+++........ .......||+.|+|||++
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 212 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMSPESL 212 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCE------EGGGSSEECGGGCCHHHH
T ss_pred EcCCCeEEECcCcccccccccccc------ccccCCCCCCCccChhhh
Confidence 999999999999999866433211 111224578999999975
No 252
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.94 E-value=4.8e-27 Score=246.03 Aligned_cols=167 Identities=23% Similarity=0.360 Sum_probs=143.1
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.++|+..+.||+|+||.||+|++..+++.||||++... ..+.+.+|++++++++ ||||+++++++.... ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCce
Confidence 35788999999999999999999999999999998643 3467889999999997 999999999987532 2367
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC-ceEEcccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVGDFG 688 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~-~~kl~Dfg 688 (725)
++||||+++++|.+++. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 109 ~lv~e~~~~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg 176 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ---------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWG 176 (330)
T ss_dssp EEEEECCCCCCHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeccCchhHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCC
Confidence 99999999999999885 378889999999999999999999 999999999999999777 89999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+....... .....||+.|+|||++.
T Consensus 177 ~a~~~~~~~~---------~~~~~~~~~y~aPE~~~ 203 (330)
T 3nsz_A 177 LAEFYHPGQE---------YNVRVASRYFKGPELLV 203 (330)
T ss_dssp TCEECCTTCC---------CCSCCSCGGGCCHHHHT
T ss_pred CceEcCCCCc---------cccccccccccChhhhc
Confidence 9987643321 11246999999999863
No 253
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.8e-27 Score=249.20 Aligned_cols=174 Identities=29% Similarity=0.526 Sum_probs=136.6
Q ss_pred cCCCCCcccccccceEEEEEEECCC----ceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGED----EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
++|+..+.||+|+||.||+|++..+ +..||||+++... ......+.+|++++++++||||+++++++....
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 4567779999999999999987544 3569999997543 234567899999999999999999999976543
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 120 -~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 120 -PMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp -SEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred -CcEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 78999999999999999976532 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+++......... .......||+.|+|||++
T Consensus 191 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 222 (333)
T 1mqb_A 191 FGLSRVLEDDPEAT-----YTTSGGKIPIRWTAPEAI 222 (333)
T ss_dssp CCC----------------------CCCGGGSCHHHH
T ss_pred CCcchhhccccccc-----cccCCCCccccccCchhc
Confidence 99998764332111 111123478899999975
No 254
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.94 E-value=3.3e-27 Score=245.74 Aligned_cols=188 Identities=21% Similarity=0.248 Sum_probs=148.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++..+++.||||++........+.+.+|++++++++||||+++++++.... ......|
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 457999999999999999999998899999999997665556678999999999999999999999986321 2234789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEeCCCCcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999763211 12589999999999999999999999 9999999999999999999999999998
Q ss_pred cccccCCCCCCC-CCCcccccccCCccccCCCccc
Q 048668 691 KFLSSHHLDTSS-KTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 691 ~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+........... ..........||+.|+|||++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 216 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS 216 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSS
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhc
Confidence 765321100000 0000112245899999999863
No 255
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.94 E-value=3e-27 Score=251.47 Aligned_cols=173 Identities=22% Similarity=0.291 Sum_probs=137.2
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCC-CCCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTD-FKGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 607 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+++.+|+++++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467999999999999999999999999999999997542 234567889999999999999999999986543 22334
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||+++ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 68999999975 78888852 478889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+...... .....+||+.|+|||++.
T Consensus 172 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~ 199 (371)
T 2xrw_A 172 GLARTAGTSF---------MMTPYVVTRYYRAPEVIL 199 (371)
T ss_dssp CC-------------------------CTTCCHHHHT
T ss_pred eccccccccc---------ccCCceecCCccCHHHhc
Confidence 9998654321 112257999999999863
No 256
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.94 E-value=1.9e-27 Score=241.48 Aligned_cols=168 Identities=24% Similarity=0.398 Sum_probs=143.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++. ++.||||++.... ....+++.+|++++++++||||+++++++.... ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCC
Confidence 457889999999999999999984 7889999997653 234567999999999999999999999986542 236
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeecCCCceEEcc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivHrdlkp~Nill~~~~~~kl~D 686 (725)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred eEeeecccCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 7999999999999999986542 1589999999999999999999998 6 99999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||++...... ...||+.|+|||++
T Consensus 157 ~~~~~~~~~~-------------~~~~t~~y~aPE~~ 180 (271)
T 3kmu_A 157 ADVKFSFQSP-------------GRMYAPAWVAPEAL 180 (271)
T ss_dssp GGSCCTTSCT-------------TCBSCGGGSCHHHH
T ss_pred ccceeeeccc-------------CccCCccccChhhh
Confidence 9987542211 24689999999986
No 257
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94 E-value=2.5e-27 Score=244.45 Aligned_cols=172 Identities=26% Similarity=0.430 Sum_probs=143.6
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 76 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-----K 76 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----E
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-----c
Confidence 357889999999999999999999899999999997543 223467889999999999999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 77 ~~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 148 (299)
T 2r3i_A 77 LYLVFEFLH-QDLKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG 148 (299)
T ss_dssp EEEEEECCS-EEHHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTT
T ss_pred eEEEEEccc-CCHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcch
Confidence 899999997 599999986542 1578999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+++....... ......||+.|+|||++
T Consensus 149 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~ 175 (299)
T 2r3i_A 149 LARAFGVPVR--------TYTHEVVTLWYRAPEIL 175 (299)
T ss_dssp HHHHHCCCSB--------CTTSCBCCCTTCCHHHH
T ss_pred hhhhccCCcc--------ccCcccccccccCcHHh
Confidence 9987643211 11124689999999975
No 258
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=3.4e-27 Score=243.38 Aligned_cols=175 Identities=24% Similarity=0.428 Sum_probs=142.6
Q ss_pred CCCCCcccccccceEEEEEEECCC---ceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 533 EFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 533 ~~~~~~~ig~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.|...+.||+|+||.||+|++..+ +..||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE----GL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----SC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC----CC
Confidence 455668999999999999986544 3479999987543 334578899999999999999999999986543 24
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.++||||+.+|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQR-----NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred cEEEEecccCCCHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCC
Confidence 5899999999999999976432 578899999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+.......... .......||+.|+|||++
T Consensus 170 ~~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~ 200 (298)
T 3pls_A 170 LARDILDREYYSV----QQHRHARLPVKWTALESL 200 (298)
T ss_dssp SSCTTTTGGGGCS----CCSSCTTCGGGGSCHHHH
T ss_pred CcccccCCccccc----ccCcCCCCCccccChhhh
Confidence 9986644321111 112235689999999975
No 259
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.94 E-value=1.7e-27 Score=244.38 Aligned_cols=172 Identities=31% Similarity=0.499 Sum_probs=134.0
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
..++|+..+.||+|+||.||+|++.. .||+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 92 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP------ 92 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC------
Confidence 35679999999999999999998753 49999997543 33457899999999999999999999975332
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 164 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDF 164 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred ccEEEEEecCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccc
Confidence 57899999999999999975532 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+++........ .......||+.|+|||++.
T Consensus 165 g~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~ 195 (289)
T 3og7_A 165 GLATEKSRWSGS------HQFEQLSGSILWMAPEVIR 195 (289)
T ss_dssp C------------------------CCCTTCCHHHHC
T ss_pred eecccccccccc------ccccccCCCccccCchhhc
Confidence 999765432111 1112356999999999863
No 260
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.2e-26 Score=236.35 Aligned_cols=214 Identities=21% Similarity=0.207 Sum_probs=121.6
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||+.+.. +|++|++++|++++..+..|..+++|++|++++|+++++.+..|.++++|++|+|++|++++..+..|.+
T Consensus 21 ~ip~~l~~--~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSCT--TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCCC--CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 34554442 5666666666665444445666666666666666665555555666666666666666665555555666
Q ss_pred cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeee-CCCcccccCccceecCCCccccccCccCcccccccC-
Q 048668 84 ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGL-IPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILW- 161 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~- 161 (725)
+++|++|++++|+++ .++...+..+++|++|+|++|+++++ .|..|.++++|++|+|++|+|+++.+..|..+++|+
T Consensus 99 l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 177 (276)
T 2z62_A 99 LSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (276)
T ss_dssp CTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccc
Confidence 666666666666665 44444445556666666666666543 255555566666666666666555555555555544
Q ss_pred ---eeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccC
Q 048668 162 ---RLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVN 238 (725)
Q Consensus 162 ---~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~ 238 (725)
+|++++|.++.++. ..+. .. +++.|++++|.+++..+..+..+++
T Consensus 178 l~l~L~ls~n~l~~~~~------------------------------~~~~-~~-~L~~L~L~~n~l~~~~~~~~~~l~~ 225 (276)
T 2z62_A 178 LNLSLDLSLNPMNFIQP------------------------------GAFK-EI-RLKELALDTNQLKSVPDGIFDRLTS 225 (276)
T ss_dssp CCEEEECCSSCCCEECT------------------------------TSSC-SC-CEEEEECCSSCCSCCCTTTTTTCCS
T ss_pred cceeeecCCCcccccCc------------------------------cccC-CC-cccEEECCCCceeecCHhHhccccc
Confidence 44555555543332 2222 11 3455555555555444555677778
Q ss_pred CceEEecccccCCC
Q 048668 239 LIALAVEVNQLHGT 252 (725)
Q Consensus 239 L~~L~L~~N~l~~~ 252 (725)
|+.|++++|.+.+.
T Consensus 226 L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 226 LQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEEECCSSCBCCC
T ss_pred ccEEEccCCccccc
Confidence 88888888888754
No 261
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=3.3e-28 Score=251.60 Aligned_cols=172 Identities=28% Similarity=0.408 Sum_probs=129.9
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHc--CCCCcccceeeEeecCCCCCccee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
++|+..+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.... ......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Ccccee
Confidence 5799999999999999999987 4788999998643 33567788898888 78999999999976553 222367
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeeecCCCc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLLDHDMV 681 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~~~~ivHrdlkp~Nill~~~~~ 681 (725)
++||||+++|+|.++++.. .+++..++.++.|++.|++||| +. +|+||||||+||+++.++.
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred EEEEeccCCCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 9999999999999999654 4677788999999999999999 66 9999999999999999999
Q ss_pred eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 682 AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 682 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+|||+|+......... .......+||+.|+|||++
T Consensus 147 ~kl~DFg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~ 184 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVL 184 (303)
T ss_dssp C-BCCCCC-CCEETTTTEE----SCC-----CCGGGCCHHHH
T ss_pred EEEeecCcceeccCCCccc----ccccCCCCcCccccCHhhh
Confidence 9999999997664432111 1111234799999999986
No 262
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=2.6e-27 Score=248.75 Aligned_cols=186 Identities=22% Similarity=0.249 Sum_probs=136.1
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCC---CCc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDF---KGV 606 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~---~~~ 606 (725)
..+|+..+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++..... ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357899999999999999999999999999999997665556678899999999996 9999999999853321 334
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeecCCCceEE
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHDMVAHV 684 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivHrdlkp~Nill~~~~~~kl 684 (725)
...++||||++ |+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES---RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT---TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 46899999995 699999875321 11589999999999999999999998 7 999999999999999999999
Q ss_pred cccccccccccCCCCCCC----CCCcccccccCCccccCCCcc
Q 048668 685 GDFGLAKFLSSHHLDTSS----KTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|||+++........... ..........||+.|+|||++
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 222 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222 (337)
T ss_dssp CCCTTCBCCSSCC------------------------------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence 999999876543211100 000111235699999999986
No 263
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.94 E-value=2.2e-27 Score=242.50 Aligned_cols=173 Identities=22% Similarity=0.457 Sum_probs=141.5
Q ss_pred HhcCCCCCcccccccceEEEEEEECC---CceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGE---DEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
..++|+..+.||+|+||.||+|++.. ++..||+|++.... ....+++.+|++++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---- 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC----
Confidence 34678899999999999999998643 45579999997553 33457899999999999999999999986532
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
..|+||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 86 --~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (281)
T 3cc6_A 86 --PTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLG 155 (281)
T ss_dssp --SCEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEEC
T ss_pred --CCEEEEecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeC
Confidence 46899999999999999976532 588999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+++........ ......||+.|+|||++
T Consensus 156 Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 186 (281)
T 3cc6_A 156 DFGLSRYIEDEDYY-------KASVTRLPIKWMSPESI 186 (281)
T ss_dssp CCCGGGCC----------------CCCCCGGGCCHHHH
T ss_pred ccCCCccccccccc-------ccccCCCCcceeCchhh
Confidence 99999876433211 11124578999999975
No 264
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=250.40 Aligned_cols=181 Identities=20% Similarity=0.314 Sum_probs=141.4
Q ss_pred hcCCCCCcccccccceEEEEEEECC---CceEEEEEEeeccccc-----------hHHHHHHHHHHHHcCCCCcccceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGE---DEMIVAVKVINLKQKG-----------AFRSFVAECEALRNIRHRNLIKIIT 596 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 596 (725)
.++|+..+.||+|+||.||+|++.. ++..||||++...... ..+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3579999999999999999999986 7889999999754321 1234678899999999999999999
Q ss_pred EeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 048668 597 ICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 676 (725)
Q Consensus 597 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill 676 (725)
++... +.+....|+||||+ +++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 184 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence 98763 23345889999999 999999998654 589999999999999999999999 99999999999999
Q ss_pred cCCC--ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 677 DHDM--VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 677 ~~~~--~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+.++ .+||+|||+|+.+......... .........||+.|+|||++
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~ 232 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQY-QENPRKGHNGTIEFTSLDAH 232 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCC-CCCGGGCSCSCTTTCCHHHH
T ss_pred ccCCCCcEEEEeCCCceecccccccccc-hhccccccCCCccccCHHHh
Confidence 9887 9999999999877543221111 11122345799999999975
No 265
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.94 E-value=4.2e-27 Score=244.16 Aligned_cols=176 Identities=25% Similarity=0.416 Sum_probs=137.4
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc---cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
..++|+..+.||+|+||.||+|++..+++.||+|++.... ....+++.+|++++++++||||+++++++....
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 105 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN---- 105 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----
Confidence 3457999999999999999999998899999999997532 334567899999999999999999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 106 -~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 106 -ELNIVLELADAGDLSRMIKHFKK--QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred -cEEEEEecCCCCCHHHHHHHhcc--cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEe
Confidence 78999999999999999975321 112588999999999999999999999 999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+++....... ......||+.|+|||++
T Consensus 180 fg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~ 208 (310)
T 2wqm_A 180 LGLGRFFSSKTT--------AAHSLVGTPYYMSPERI 208 (310)
T ss_dssp C--------------------------CCSSCCHHHH
T ss_pred ccceeeecCCCc--------cccccCCCeeEeChHHh
Confidence 999986543211 11124699999999975
No 266
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.6e-26 Score=235.43 Aligned_cols=226 Identities=20% Similarity=0.204 Sum_probs=122.3
Q ss_pred EEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCC
Q 048668 17 ALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNR 96 (725)
Q Consensus 17 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 96 (725)
..+..+.+++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3455555555 4555443 356666666666665555566666666666666666655555555656666666666665
Q ss_pred CCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCC
Q 048668 97 FSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAAN 176 (725)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~ 176 (725)
++ .++...|.++++|++|++++|+++++.+..+..+++|++|+|++|+++++.
T Consensus 88 l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-------------------------- 140 (276)
T 2z62_A 88 IQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK-------------------------- 140 (276)
T ss_dssp CC-EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC--------------------------
T ss_pred cC-ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceec--------------------------
Confidence 55 444444445555555555555555444444555555555555555544322
Q ss_pred CcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCc-eEEecccccCCCCCh
Q 048668 177 DLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLI-ALAVEVNQLHGTIPD 255 (725)
Q Consensus 177 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~ 255 (725)
++..+.++++|++|++++|++++..+..+..+. .+. .|. .|++++|.+.++.+.
T Consensus 141 ---l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~---------------------~l~l~L~ls~n~l~~~~~~ 195 (276)
T 2z62_A 141 ---LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH-QMP---------------------LLNLSLDLSLNPMNFIQPG 195 (276)
T ss_dssp ---CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHH-TCT---------------------TCCEEEECCSSCCCEECTT
T ss_pred ---CchhhccCCCCCEEECCCCCCCcCCHHHhhhhh-hcc---------------------ccceeeecCCCcccccCcc
Confidence 113455666777777777777654444444433 222 111 455555555544444
Q ss_pred hhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCC
Q 048668 256 VIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQ 298 (725)
Q Consensus 256 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 298 (725)
.+.. .+|++|++++|.+++..+..|..+++|++|++++|+++
T Consensus 196 ~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 196 AFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp SSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred ccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 4433 25666666666666554445566666666666666554
No 267
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=6.3e-27 Score=245.90 Aligned_cols=179 Identities=27% Similarity=0.375 Sum_probs=140.8
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC--CCCcccceeeEeecCCCCCc
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~~~ 606 (725)
...++|+..+.||+|+||.||+|+++ ++.||||++.... ...+.+|.+++... +||||+++++++.... ...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~ 107 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGT-GSW 107 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCC
Confidence 34568999999999999999999984 8899999986432 24455666666655 8999999999987653 222
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEecCCCCCCeeecCCCc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC-----QPPMVHGDLKPSNVLLDHDMV 681 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivHrdlkp~Nill~~~~~ 681 (725)
...|+||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CceEEEEeccCCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 4789999999999999999654 4889999999999999999999752 348999999999999999999
Q ss_pred eEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 682 AHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 682 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+||+|||+|+.+........ ......+||+.|+|||++.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~ 219 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVD----IPPNTRVGTKRYMPPEVLD 219 (337)
T ss_dssp EEECCCTTCEECC-------------CCSSCSCGGGCCHHHHT
T ss_pred EEEEeCCCceeecccccccc----CCCCCCccCcceeChhhcc
Confidence 99999999987644321111 1112357999999999863
No 268
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94 E-value=4e-27 Score=240.33 Aligned_cols=171 Identities=25% Similarity=0.508 Sum_probs=143.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++. ++..||+|++.... ...+.+.+|++++++++||||+++++++... ..+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~ 83 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE------PIY 83 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS------SCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC------CcE
Confidence 457888999999999999999986 56789999997543 3457899999999999999999999987532 478
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 84 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPS----GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp EEEECCTTCBHHHHTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 9999999999999997532 12588999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+........ ......||+.|+|||++
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 182 (279)
T 1qpc_A 157 RLIEDNEYT-------AREGAKFPIKWTAPEAI 182 (279)
T ss_dssp EECSSSCEE-------CCTTCCCCTTTSCHHHH
T ss_pred ccccCcccc-------cccCCCCccCccChhhh
Confidence 876433211 11124578899999975
No 269
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.94 E-value=1.7e-27 Score=259.81 Aligned_cols=172 Identities=28% Similarity=0.502 Sum_probs=139.2
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..++|+..+.||+|+||.||+|++.. +..||||+++... ...++|.+|++++++++||||+++++++.. +..
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~ 253 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 253 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------Cce
Confidence 44678889999999999999999974 5679999997543 235789999999999999999999998754 257
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 326 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGL 326 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred EEEehhhcCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCcc
Confidence 89999999999999997532 12588999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+........ ......+|+.|+|||++
T Consensus 327 a~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 353 (452)
T 1fmk_A 327 ARLIEDNEYT-------ARQGAKFPIKWTAPEAA 353 (452)
T ss_dssp TC---------------------CCGGGSCHHHH
T ss_pred ceecCCCcee-------cccCCcccccccCHhHH
Confidence 9876432111 11224578899999975
No 270
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.94 E-value=1.1e-27 Score=244.47 Aligned_cols=177 Identities=26% Similarity=0.396 Sum_probs=146.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT---NTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG---GTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC---Cce
Confidence 468999999999999999999999999999999997543 234567899999999999999999999875322 247
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCC-----cEecCCCCCCeeecCCCceE
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPP-----MVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-----ivHrdlkp~Nill~~~~~~k 683 (725)
.|+||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred EEEEEeCCCCCCHHHHHHhhcc--cCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 8999999999999999975421 112489999999999999999999998 7 99999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|||.++...... .......||+.|+|||++
T Consensus 157 l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~ 188 (279)
T 2w5a_A 157 LGDFGLARILNHDT--------SFAKTFVGTPYYMSPEQM 188 (279)
T ss_dssp ECCCCHHHHC---C--------HHHHHHHSCCTTCCHHHH
T ss_pred EecCchheeecccc--------ccccccCCCccccChHHh
Confidence 99999998653321 111234699999999975
No 271
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.94 E-value=5e-27 Score=244.74 Aligned_cols=177 Identities=25% Similarity=0.405 Sum_probs=140.2
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCC--------
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTD-------- 602 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 602 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++........+++.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357889999999999999999999899999999998766666788999999999999999999999875331
Q ss_pred -CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec-CCC
Q 048668 603 -FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-HDM 680 (725)
Q Consensus 603 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~-~~~ 680 (725)
+......|+||||++ |+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++ .++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 123357899999997 5999999643 478999999999999999999999 999999999999997 567
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
.+||+|||+++......... .......||+.|+|||++
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 196 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHK-----GHLSEGLVTKWYRSPRLL 196 (320)
T ss_dssp EEEECCCTTCBCC-------------CCCGGGSCCTTCCHHHH
T ss_pred eEEEccCccccccCCCcccc-----cccccccccccccCcHHh
Confidence 99999999998764321111 111224689999999975
No 272
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=4.7e-28 Score=269.91 Aligned_cols=159 Identities=15% Similarity=0.052 Sum_probs=123.5
Q ss_pred cccccceEEEEEEECCCceEEEEEEeeccc----------cchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCcce
Q 048668 540 IGQGSFGSVYKGILGEDEMIVAVKVINLKQ----------KGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 540 ig~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.+.|++|.+..++....|+.||||++..+. +...++|.+|+++|+++ .|+||+++++++.+.. .
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~-----~ 316 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ-----S 316 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS-----E
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC-----E
Confidence 456777777666665678889999997542 12346799999999999 5999999999976554 8
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.||||||++|++|.++|.+.. .+++. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||
T Consensus 317 ~yLVMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFG 384 (569)
T 4azs_A 317 GWLVMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFG 384 (569)
T ss_dssp EEEEEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecc
Confidence 999999999999999998765 35543 5889999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+...... ....+.+||++|||||++
T Consensus 385 lAr~~~~~~--------~~~~t~vGTp~YmAPE~l 411 (569)
T 4azs_A 385 SIVTTPQDC--------SWPTNLVQSFFVFVNELF 411 (569)
T ss_dssp TEESCC-----------CCSHHHHHHHHHHHHHHC
T ss_pred cCeeCCCCC--------ccccCceechhhccHHHh
Confidence 998764321 122346899999999986
No 273
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.94 E-value=2e-27 Score=249.29 Aligned_cols=183 Identities=22% Similarity=0.352 Sum_probs=147.5
Q ss_pred HHHHhcCCCCCcccccccceEEEEEEECCCce-----EEEEEEeeccc-cchHHHHHHHHHHHHcC-CCCcccceeeEee
Q 048668 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEM-----IVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICS 599 (725)
Q Consensus 527 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 599 (725)
+....++|+..+.||+|+||.||+|++..++. .||+|++.... ....+.+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 33445688899999999999999999876554 79999997543 23456789999999999 8999999999976
Q ss_pred cCCCCCcceeeEEEeccCCCCHHHHhcccCCcc--------ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 048668 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQV--------EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKP 671 (725)
Q Consensus 600 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp 671 (725)
... ..|+||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||
T Consensus 121 ~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 121 HGG-----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp SSS-----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred cCC-----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 554 7899999999999999997542100 012478999999999999999999999 999999999
Q ss_pred CCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 672 SNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 672 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+||+++.++.+||+|||+|+........ .......||+.|+|||++
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~ 238 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNY------IVKGNARLPVKWMAPESI 238 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTS------EECSSCEECGGGSCHHHH
T ss_pred ceEEECCCCeEEECccccccccccccce------eecCCCCCCccccCHHHh
Confidence 9999999999999999999866433211 111224578999999975
No 274
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.94 E-value=1e-27 Score=247.97 Aligned_cols=185 Identities=25% Similarity=0.353 Sum_probs=129.4
Q ss_pred HHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 528 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
....++|+..+.||+|+||.||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 86 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD---- 86 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS----
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC----
Confidence 344578999999999999999999998889999999986543 334567889999999999999999999987654
Q ss_pred ceeeEEEeccCCCCHHHHhcccCC--ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEE
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSND--QVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl 684 (725)
..++||||+++++|.+++..... ......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 87 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 87 -ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred -CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEE
Confidence 78999999999999999874210 00112589999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|||+++.......... ........||+.|+|||++
T Consensus 163 ~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~ 198 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITR---NKVRKTFVGTPCWMAPEVM 198 (303)
T ss_dssp CCCHHHHHCC------------------CCCTTCCHHHH
T ss_pred EeccchheeccCCCccc---hhhhcccCCCccccCHHHh
Confidence 99999987643211110 1111235699999999975
No 275
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.94 E-value=2.7e-27 Score=247.50 Aligned_cols=179 Identities=24% Similarity=0.423 Sum_probs=140.4
Q ss_pred hcCCCCCcccccccceEEEEEE-----ECCCceEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGI-----LGEDEMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
.++|+..+.||+|+||.||+|+ ...+++.||||++... ......++.+|+.++++++||||+++++++....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 4689999999999999999998 4457789999999644 2344568899999999999999999999976554
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCcc-ccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC---C
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQV-EVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---M 680 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~---~ 680 (725)
..|+||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.+ .
T Consensus 107 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 107 ---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred ---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 6799999999999999998654221 123588999999999999999999999 99999999999999944 4
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
.+||+|||+++......... ......||+.|+|||++
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~ 217 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYYR------KGGCAMLPVKWMPPEAF 217 (327)
T ss_dssp CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHH
T ss_pred eEEECccccccccccccccc------cCCCcCCCcceeCHhHh
Confidence 69999999998654332111 11224689999999975
No 276
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.94 E-value=4.6e-27 Score=243.22 Aligned_cols=169 Identities=28% Similarity=0.470 Sum_probs=134.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++. ++.||||++... ...+.|.+|++++++++||||+++++++.. ..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcE
Confidence 357888999999999999999984 678999998633 345789999999999999999999998642 468
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc-eEEccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-AHVGDFGL 689 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~-~kl~Dfgl 689 (725)
+||||+++|+|.+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~ 152 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred EEEEcCCCCCHHHHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccc
Confidence 99999999999999986542 124788899999999999999999932238999999999999998886 79999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
++...... ....||+.|+|||++.
T Consensus 153 ~~~~~~~~-----------~~~~gt~~y~aPE~~~ 176 (307)
T 2eva_A 153 ACDIQTHM-----------TNNKGSAAWMAPEVFE 176 (307)
T ss_dssp -----------------------CCTTSSCHHHHT
T ss_pred cccccccc-----------ccCCCCCceEChhhhC
Confidence 97653221 1245999999999763
No 277
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=5.5e-27 Score=240.37 Aligned_cols=173 Identities=25% Similarity=0.447 Sum_probs=141.9
Q ss_pred cCCCCCc-ccccccceEEEEEEEC--CCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcc
Q 048668 532 SEFSSSN-MIGQGSFGSVYKGILG--EDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 532 ~~~~~~~-~ig~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 607 (725)
++|...+ .||+|+||.||+|+++ .++..||||+++... ....+++.+|++++++++||||+++++++.. +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------S
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC------C
Confidence 4555555 8999999999999864 467889999997643 3346789999999999999999999999732 2
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred CcEEEEEeCCCCCHHHHHHhCCc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 57999999999999999975432 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+++......... .......||+.|+|||++
T Consensus 155 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~ 185 (287)
T 1u59_A 155 GLSKALGADDSYY-----TARSAGKWPLKWYAPECI 185 (287)
T ss_dssp TTCEECTTCSCEE-----CCCCSSCCCGGGCCHHHH
T ss_pred cceeeeccCccee-----eccccccccccccCHHHh
Confidence 9998764332111 111124578999999975
No 278
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.94 E-value=4.4e-27 Score=241.60 Aligned_cols=173 Identities=26% Similarity=0.400 Sum_probs=140.9
Q ss_pred hcCCCCCc-ccccccceEEEEEEE--CCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 531 TSEFSSSN-MIGQGSFGSVYKGIL--GEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 531 ~~~~~~~~-~ig~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
.++|+..+ .||+|+||.||+|.+ ..+++.||||++.... ....+++.+|++++++++||||+++++++..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 89 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA----- 89 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-----
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-----
Confidence 35677777 999999999999954 5678899999997543 2335789999999999999999999999832
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
+..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 90 -~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 90 -ESWMLVMEMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp -SSEEEEEECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred -CCcEEEEEeCCCCCHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEc
Confidence 25789999999999999998654 588999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+++........ ........||+.|+|||++
T Consensus 160 Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~ 192 (291)
T 1xbb_A 160 DFGLSKALRADENY-----YKAQTHGKWPVKWYAPECI 192 (291)
T ss_dssp CCTTCEECCTTCSE-----EEC----CCCGGGCCHHHH
T ss_pred cCCcceeeccCCCc-----ccccccCCCCceeeChHHh
Confidence 99999876433211 0111123478999999975
No 279
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.94 E-value=4.1e-27 Score=246.11 Aligned_cols=175 Identities=29% Similarity=0.478 Sum_probs=141.2
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEE--EEEEeecc-ccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCcc
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIV--AVKVINLK-QKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVD 607 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 607 (725)
++|+..+.||+|+||.||+|++..++..+ |+|.+... .....+++.+|+++++++ +||||+++++++....
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----- 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-----
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC-----
Confidence 47888999999999999999998788755 89988643 233456789999999999 8999999999986654
Q ss_pred eeeEEEeccCCCCHHHHhcccCCc----------cccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQ----------VEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 677 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~ 677 (725)
..|+||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 789999999999999999865310 0112589999999999999999999999 999999999999999
Q ss_pred CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 678 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
.++.+||+|||+++...... ......+|+.|+|||++
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~ 213 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESL 213 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC---------CC----CCTTTCCHHHH
T ss_pred CCCeEEEcccCcCccccccc---------cccCCCCCccccChhhh
Confidence 99999999999997432211 11123578899999975
No 280
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.94 E-value=2.8e-27 Score=255.58 Aligned_cols=174 Identities=26% Similarity=0.400 Sum_probs=138.3
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCC-CCcceee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDF-KGVDFKA 610 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~~ 610 (725)
..|+..+.||+|+||.||+|++..+++.||||++..... .+.+|++++++++||||+++++++..... ....+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 468889999999999999999998999999999865432 23479999999999999999998754321 2233577
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC-CceEEccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD-MVAHVGDFGL 689 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~-~~~kl~Dfgl 689 (725)
+||||+++ ++.+.+..... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eehhcccc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 99999976 67666653210 012589999999999999999999998 99999999999999965 5789999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+.+..... ....+||+.|+|||++.
T Consensus 204 a~~~~~~~~---------~~~~~~t~~y~aPE~~~ 229 (420)
T 1j1b_A 204 AKQLVRGEP---------NVSYICSRYYRAPELIF 229 (420)
T ss_dssp CEECCTTCC---------CCSCCSCTTSCCHHHHT
T ss_pred hhhcccCCC---------ceeeeeCCCcCCHHHHc
Confidence 987643211 12257999999999864
No 281
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94 E-value=3.7e-27 Score=266.78 Aligned_cols=166 Identities=27% Similarity=0.414 Sum_probs=135.5
Q ss_pred cccccccceEEEEEEE--CCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeEEE
Q 048668 538 NMIGQGSFGSVYKGIL--GEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVF 613 (725)
Q Consensus 538 ~~ig~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 613 (725)
+.||+|+||.||+|.+ +.+++.||||+++... ....+++.+|++++++++|||||++++++... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS------SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------CEEEEE
Confidence 4799999999999955 4577899999997543 33457899999999999999999999998532 478999
Q ss_pred eccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccccccc
Q 048668 614 EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 614 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~ 693 (725)
|||++|+|.+++.... .+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+
T Consensus 449 E~~~~g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp ECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EccCCCCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999997654 588999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 694 SSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
....... .......||+.|+|||++
T Consensus 520 ~~~~~~~-----~~~~~~~~t~~y~APE~~ 544 (635)
T 4fl3_A 520 RADENYY-----KAQTHGKWPVKWYAPECI 544 (635)
T ss_dssp TC------------------CGGGSCHHHH
T ss_pred ccCcccc-----ccccCCCCceeeeChhhh
Confidence 5432111 111224578999999975
No 282
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.94 E-value=5.8e-27 Score=243.83 Aligned_cols=172 Identities=30% Similarity=0.437 Sum_probs=142.0
Q ss_pred CCCCcccccccceEEEEEEE----CCCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 534 FSSSNMIGQGSFGSVYKGIL----GEDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 534 ~~~~~~ig~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
|+..+.||+|+||.||+|.+ ..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG---AAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---TTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---Cce
Confidence 48889999999999988764 3578899999997553 234567899999999999999999999987542 246
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred EEEEEecccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcc
Confidence 89999999999999999754 388999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+........ ........||+.|+|||++
T Consensus 180 ~a~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~ 209 (318)
T 3lxp_A 180 LAKAVPEGHEY-----YRVREDGDSPVFWYAPECL 209 (318)
T ss_dssp GCEECCTTCSE-----EEC---CCCCGGGCCHHHH
T ss_pred ccccccccccc-----cccccCCCCCceeeChHHh
Confidence 99876443211 0111234589999999975
No 283
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=5.1e-27 Score=264.99 Aligned_cols=166 Identities=25% Similarity=0.450 Sum_probs=135.2
Q ss_pred ccccccceEEEEEEEC--CCceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceeeEEEec
Q 048668 539 MIGQGSFGSVYKGILG--EDEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKALVFEY 615 (725)
Q Consensus 539 ~ig~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 615 (725)
.||+|+||.||+|.++ .++..||||+++... ....++|.+|++++++++||||++++++|... ..|+||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~------~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE------ALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS------SEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC------CeEEEEEe
Confidence 7999999999999875 456789999997643 34568899999999999999999999998642 47999999
Q ss_pred cCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccccccccc
Q 048668 616 MGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSS 695 (725)
Q Consensus 616 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~~~ 695 (725)
|++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 417 ~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 417 AGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp CTTCBHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred CCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999975532 589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCcccccccCCccccCCCcc
Q 048668 696 HHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 696 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
..... .......+|+.|||||++
T Consensus 489 ~~~~~-----~~~~~~~~~~~y~APE~~ 511 (613)
T 2ozo_A 489 DDSYY-----TARSAGKWPLKWYAPECI 511 (613)
T ss_dssp ------------------CCTTSCHHHH
T ss_pred CCcee-----eeccCCCCccceeCHhhh
Confidence 21111 111123467899999976
No 284
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=4.8e-27 Score=247.97 Aligned_cols=170 Identities=22% Similarity=0.413 Sum_probs=144.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccc-----------------hHHHHHHHHHHHHcCCCCcccc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----------------AFRSFVAECEALRNIRHRNLIK 593 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~E~~~l~~l~h~niv~ 593 (725)
.++|+..+.||+|+||.||+|++ +++.||||++...... ..+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 8999999999754211 1178999999999999999999
Q ss_pred eeeEeecCCCCCcceeeEEEeccCCCCHHHH------hcccCCccccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEe
Q 048668 594 IITICSSTDFKGVDFKALVFEYMGNGSLEDW------LHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH-HCQPPMVH 666 (725)
Q Consensus 594 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~ivH 666 (725)
+++++.... ..|+||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . +|+|
T Consensus 108 ~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H 175 (348)
T 2pml_X 108 CEGIITNYD-----EVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH 175 (348)
T ss_dssp CSEEEESSS-----EEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred EEEEEeeCC-----eEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence 999987654 78999999999999999 54421 2268999999999999999999998 8 9999
Q ss_pred cCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 667 GDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 667 rdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||||+||+++.++.+||+|||.++..... ......||+.|+|||++.
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~ 223 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFS 223 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGS
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhc
Confidence 999999999999999999999999875332 112256999999999864
No 285
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.94 E-value=9e-27 Score=247.11 Aligned_cols=184 Identities=24% Similarity=0.304 Sum_probs=135.3
Q ss_pred HHHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCC-
Q 048668 525 AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDF- 603 (725)
Q Consensus 525 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 603 (725)
.......++|+..+.||+|+||.||+|++..+++.||||++..... ...++.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 4566778899999999999999999999999999999999865432 23456788889999999999999999865332
Q ss_pred -CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHH--hcCCCCcEecCCCCCCeeecC-C
Q 048668 604 -KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDH-D 679 (725)
Q Consensus 604 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--~~~~~~ivHrdlkp~Nill~~-~ 679 (725)
....+.++||||+++ ++.+.+..... ....+++..+..++.|++.|+.|+| +. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 122347899999976 55554432110 1125789999999999999999999 77 9999999999999997 8
Q ss_pred CceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 680 MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 680 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+.+||+|||+|+....... .....||+.|+|||++.
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~ 204 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP---------NVAYICSRYYRAPELIF 204 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC---------CCSTTSCGGGCCHHHHT
T ss_pred CcEEEeeCCCceecCCCCC---------cccccCCcceeCHHHHc
Confidence 9999999999987643321 11256999999999863
No 286
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.94 E-value=1e-26 Score=238.37 Aligned_cols=172 Identities=30% Similarity=0.416 Sum_probs=146.9
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
...++|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 94 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS---- 94 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC----
Confidence 34568999999999999999999999899999999997542 335678999999999999999999999976554
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC---CceE
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAH 683 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~---~~~k 683 (725)
..|+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+|
T Consensus 95 -~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~k 164 (287)
T 2wei_A 95 -SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIK 164 (287)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred -eEEEEEEccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEE
Confidence 7899999999999999987654 588999999999999999999999 99999999999999764 4799
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|||+++....... .....||+.|+|||++
T Consensus 165 L~Dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~ 195 (287)
T 2wei_A 165 IIDFGLSTCFQQNTK---------MKDRIGTAYYIAPEVL 195 (287)
T ss_dssp ECSTTGGGTBCCCSS---------CSCHHHHHTTCCHHHH
T ss_pred EeccCcceeecCCCc---------cccccCcccccChHHh
Confidence 999999986543211 1124589999999975
No 287
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.94 E-value=9e-27 Score=239.90 Aligned_cols=179 Identities=27% Similarity=0.406 Sum_probs=142.2
Q ss_pred HhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
..++|+..+.||+|+||.||+|++..+++.||||++...... +++.+|++++++++|++++..++++.... +..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEG----DYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEET----TEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCC----Cce
Confidence 456899999999999999999999989999999987654322 35778999999999998888777764432 478
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---cCCCceEEcc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGD 686 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill---~~~~~~kl~D 686 (725)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred EEEEEcc-CCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 9999999 9999999985432 589999999999999999999999 99999999999999 7889999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|+........... .........||+.|+|||++.
T Consensus 152 fg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~ 188 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHI-PYRENKNLTGTARYASINTHL 188 (296)
T ss_dssp CTTCEECBCTTTCCBC-CCCCSCCCCSCGGGCCHHHHT
T ss_pred CccceeccCcccCccC-CCCcccccCCCccccchHHhc
Confidence 9999876543221110 011222357999999999863
No 288
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.94 E-value=9.1e-27 Score=252.17 Aligned_cols=169 Identities=24% Similarity=0.336 Sum_probs=142.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC------CCCcccceeeEeecCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI------RHRNLIKIITICSSTDFK 604 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 604 (725)
..+|+..+.||+|+||.||+|++..+++.||||+++... ...+++.+|+++++.+ +|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 456899999999999999999999999999999996432 2346677888888877 5779999999977654
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc--e
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV--A 682 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~--~ 682 (725)
..++||||++ ++|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +
T Consensus 173 ---~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 173 ---HICMTFELLS-MNLYELIKKNKFQ----GFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp ---EEEEEECCCC-CBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCE
T ss_pred ---eEEEEEeccC-CCHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcce
Confidence 7899999995 6999999865422 589999999999999999999999 9999999999999999987 9
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+..... ....+||+.|||||++.
T Consensus 242 kL~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~ 272 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR-----------VYTYIQSRFYRAPEVIL 272 (429)
T ss_dssp EECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHH
T ss_pred EEeecccceecCCc-----------ccccCCCCCccChHHHh
Confidence 99999999754321 11257999999999863
No 289
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.94 E-value=1.4e-26 Score=238.58 Aligned_cols=178 Identities=28% Similarity=0.411 Sum_probs=145.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++..+++.||||++..... .+++.+|++++++++|++++..++++.... +..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG----DYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEET----TEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCC----CceE
Confidence 4679999999999999999999988999999999875433 246889999999999998877777664432 4789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---cCCCceEEccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGDF 687 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill---~~~~~~kl~Df 687 (725)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 82 lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEec-CCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 999999 8999999975432 589999999999999999999999 99999999999999 47889999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+........... .........||+.|+|||++.
T Consensus 153 g~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~ 188 (296)
T 3uzp_A 153 GLAKKYRDARTHQHI-PYRENKNLTGTARYASINTHL 188 (296)
T ss_dssp TTCEECBCTTTCCBC-CCCCSCCCCSCTTTCCHHHHT
T ss_pred CCccccccccccccc-ccccccccccccccCChhhhc
Confidence 999876543221110 011123457999999999863
No 290
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.94 E-value=3.9e-27 Score=240.26 Aligned_cols=167 Identities=35% Similarity=0.480 Sum_probs=135.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcceee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.++|+..+.||+|+||.||+|++ +++.||||+++.. ...+++.+|++++++++||||+++++++.... +..|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----CceE
Confidence 46789999999999999999988 4789999998644 24578899999999999999999999875432 3679
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccccc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLA 690 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla 690 (725)
+||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp EEECCCTTEEHHHHHHHHH----HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEecCCCCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccc
Confidence 9999999999999997543 12478899999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 691 KFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+...... ....+|+.|+|||++
T Consensus 165 ~~~~~~~-----------~~~~~~~~y~aPE~~ 186 (278)
T 1byg_A 165 KEASSTQ-----------DTGKLPVKWTAPEAL 186 (278)
T ss_dssp ----------------------CCTTTSCHHHH
T ss_pred ccccccc-----------cCCCccccccCHHHh
Confidence 7543221 113578999999975
No 291
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.94 E-value=3.5e-27 Score=262.59 Aligned_cols=173 Identities=28% Similarity=0.495 Sum_probs=144.0
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
...++|+..+.||+|+||.||+|++.. +..||||+++... ...++|.+|++++++++||||+++++++.. +.
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~ 335 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EP 335 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SS
T ss_pred cchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------cc
Confidence 345678889999999999999999974 5679999997543 235789999999999999999999998754 25
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+++|+|.++++... ...+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 336 ~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 408 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 408 (535)
T ss_dssp CEEEECCCTTEEHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTT
T ss_pred ceEeeehhcCCcHHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccc
Confidence 799999999999999997532 12588999999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+++........ ......+|..|||||++
T Consensus 409 ~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~ 436 (535)
T 2h8h_A 409 LARLIEDNEYT-------ARQGAKFPIKWTAPEAA 436 (535)
T ss_dssp STTTCCCHHHH-------TTCSTTSCGGGSCHHHH
T ss_pred cceecCCCcee-------cccCCcCcccccCHHHh
Confidence 99876432111 11124578899999975
No 292
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.94 E-value=2.2e-26 Score=242.29 Aligned_cols=177 Identities=27% Similarity=0.388 Sum_probs=145.0
Q ss_pred HHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHc--CCCCcccceeeEeecCCCCC
Q 048668 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 528 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~ 605 (725)
....++|+..+.||+|+||.||+|++ +++.||||++... ..+.+.+|++++.. ++||||+++++++.... ..
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~ 111 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GT 111 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-Cc
Confidence 44556899999999999999999998 5889999998643 34567889999887 78999999999987653 12
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeeec
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLLD 677 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~~~~ivHrdlkp~Nill~ 677 (725)
....|+||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred cceeEEEEeecCCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 23689999999999999999753 4889999999999999999999 66 999999999999999
Q ss_pred CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 678 HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 678 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.++.+||+|||+|+......... ........||+.|+|||++.
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~ 224 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLD 224 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEE----EECCCSCCCCGGGCCHHHHT
T ss_pred CCCCEEEEECCCceecccccccc----ccccccCCcCcccCCHhhhc
Confidence 99999999999998764432110 00112356999999999863
No 293
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.94 E-value=8.2e-27 Score=239.44 Aligned_cols=174 Identities=23% Similarity=0.271 Sum_probs=131.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.++...++.++||||+++++++.... .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~-----~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----D 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC-----C
Confidence 4678999999999999999999999999999999975422 22234445555688889999999999987554 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.++||||+++ +|.+++..... ....+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 VWICMELMDT-SLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp EEEEEECCSE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred EEEEEehhcc-chHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecC
Confidence 8999999974 88888764211 0125899999999999999999999852 89999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|+....... .....||+.|+|||++
T Consensus 156 ~~~~~~~~~~---------~~~~~~t~~y~aPE~~ 181 (290)
T 3fme_A 156 ISGYLVDDVA---------KDIDAGCKPYMAPERI 181 (290)
T ss_dssp -----------------------CCCCCCSCHHHH
T ss_pred Cccccccccc---------ccccCCCccccChhhc
Confidence 9987643211 1124699999999985
No 294
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.94 E-value=1e-26 Score=247.33 Aligned_cols=171 Identities=23% Similarity=0.336 Sum_probs=140.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCC-Ccc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFK-GVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~~~ 607 (725)
.++|...+.||+|+||.||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++...... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888999999999999999999999999999997542 23357788999999999999999999998655421 112
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECST
T ss_pred eEEEEEcccc-ccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEec
Confidence 3489999997 589888742 478999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|+..... ....+||+.|+|||++.
T Consensus 189 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~ 214 (371)
T 4exu_A 189 GLARHADAE-----------MTGYVVTRWYRAPEVIL 214 (371)
T ss_dssp TCC-------------------CTTCCCTTSCHHHHS
T ss_pred CcccccccC-----------cCCcccCccccCHHHhc
Confidence 999765322 11256899999999763
No 295
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.94 E-value=9.3e-27 Score=244.89 Aligned_cols=174 Identities=22% Similarity=0.300 Sum_probs=141.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHHH-HHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECEA-LRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... .....++..|+.+ ++.++||||+++++++.... .
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~-----~ 124 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----D 124 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS-----C
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC-----c
Confidence 457888899999999999999999899999999997543 2334556666666 77789999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||+++ +|.+++..... ....+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHH--TSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred EEEEHHHhhC-cHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCC
Confidence 8999999975 99998874211 0126899999999999999999999742 89999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+++...... .....+||+.|+|||++
T Consensus 200 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~ 225 (340)
T 3an0_A 200 ISGYLVDSV---------AKTIDAGCKPYMAPERI 225 (340)
T ss_dssp HHHHHSCHH---------HHHHSSCCCCCCCHHHH
T ss_pred Cceeccccc---------ccccCCCCccccCcccc
Confidence 998763321 11124699999999985
No 296
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.94 E-value=9.8e-27 Score=243.20 Aligned_cols=178 Identities=25% Similarity=0.452 Sum_probs=144.7
Q ss_pred HhcCCCCCcccccccceEEEEEEEC-CCceEEEEEEeeccc--cchHHHHHHHHHHHHcC---CCCcccceeeEeecCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILG-EDEMIVAVKVINLKQ--KGAFRSFVAECEALRNI---RHRNLIKIITICSSTDF 603 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~ 603 (725)
..++|+..+.||+|+||.||+|++. .+++.||+|++.... ......+.+|+++++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999995 678999999997543 22234566788777766 89999999999864333
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
......++||||++ |+|.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 33457899999997 6999999865421 489999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+|||+++...... ......||+.|+|||++.
T Consensus 161 l~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~ 192 (326)
T 1blx_A 161 LADFGLARIYSFQM---------ALTSVVVTLWYRAPEVLL 192 (326)
T ss_dssp ECSCCSCCCCCGGG---------GGCCCCCCCTTCCHHHHT
T ss_pred EecCcccccccCCC---------CccccccccceeCHHHHh
Confidence 99999997654321 112356999999999763
No 297
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.94 E-value=8e-27 Score=249.93 Aligned_cols=174 Identities=25% Similarity=0.360 Sum_probs=135.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCC-CCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDF-KGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~ 609 (725)
..+|+..+.||+|+||+||+|++..+++ ||+|++...... ..+|+++++.++||||+++++++..... ....+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3468999999999999999999986665 888887543321 2369999999999999999999865432 233457
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec-CCCceEEcccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVGDFG 688 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~-~~~~~kl~Dfg 688 (725)
++||||++++ +.+.+..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 114 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 114 NLVLEYVPET-VYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEECCSEE-HHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEeeccCcc-HHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 8999999774 4443332100 012589999999999999999999999 999999999999999 78999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+....... ....+||+.|+|||++.
T Consensus 188 ~a~~~~~~~~---------~~~~~~t~~y~aPE~~~ 214 (394)
T 4e7w_A 188 SAKILIAGEP---------NVSYICSRYYRAPELIF 214 (394)
T ss_dssp TCEECCTTCC---------CCSSCSCGGGCCHHHHT
T ss_pred CcccccCCCC---------CcccccCcCccCHHHHc
Confidence 9987643321 12256899999999863
No 298
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.94 E-value=5.1e-27 Score=249.82 Aligned_cols=173 Identities=13% Similarity=0.065 Sum_probs=125.6
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc---chHHHHHHHH---HHHHcCCCCccccee-------eE
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFRSFVAEC---EALRNIRHRNLIKII-------TI 597 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 597 (725)
...|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+ +.++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 3458889999999999999999999999999999986542 2345677785 45555 799988755 33
Q ss_pred eecCCCC------------CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHH------HHHHHHHHHHHHHHHhc
Q 048668 598 CSSTDFK------------GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQR------LNIAIDVASAIEYLHHH 659 (725)
Q Consensus 598 ~~~~~~~------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~------~~i~~~i~~~l~~lH~~ 659 (725)
+...... .....|+||||++ |+|.+++..... .+++..+ ..++.||+.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~ 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-----VYVFRGDEGILALHILTAQLIRLAANLQSK 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence 3222110 0135799999998 899999986421 2344444 67789999999999999
Q ss_pred CCCCcEecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 660 CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 660 ~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+|+||||||+|||++.++.+||+|||+|+..... .....||+.|+|||++.
T Consensus 214 ---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~ 264 (371)
T 3q60_A 214 ---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----------GPASSVPVTYAPREFLN 264 (371)
T ss_dssp ---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----------EEGGGSCGGGCCHHHHT
T ss_pred ---CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----------ccCccCCcCCcChhhcc
Confidence 9999999999999999999999999999865321 11245779999999863
No 299
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.94 E-value=4.4e-27 Score=248.46 Aligned_cols=175 Identities=15% Similarity=0.220 Sum_probs=140.7
Q ss_pred cCCCCCcccccccceEEEEEEECC--------CceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccc----------
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGE--------DEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK---------- 593 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 593 (725)
++|+..+.||+|+||.||+|++.. .++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 579999999999999999999986 3789999998744 35779999999999999998
Q ss_pred -----eeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecC
Q 048668 594 -----IITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGD 668 (725)
Q Consensus 594 -----l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrd 668 (725)
+++++... ....|+||||+ +++|.+++.... ...+++..++.++.|++.||+|||++ +|+|||
T Consensus 117 ~~i~~~~~~~~~~----~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVHQ----DKYRFLVLPSL-GRSLQSALDVSP----KHVLSERSVLQVACRLLDALEFLHEN---EYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEET----TTEEEEEEECC-CEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred cCccchhhccccC----CcEEEEEecCC-CcCHHHHHHhCC----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCC
Confidence 45555432 24789999999 999999998652 12689999999999999999999999 999999
Q ss_pred CCCCCeeecCCC--ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 669 LKPSNVLLDHDM--VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 669 lkp~Nill~~~~--~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||+||+++.++ .+||+|||+|+.+......... .........||+.|+|||++.
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~ 241 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY-VEGSRSPHEGDLEFISMDLHK 241 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC-CTTSSCTTCSCTTTCCHHHHT
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccc-cccccccccCCccccCHHHHc
Confidence 999999999998 8999999999876543221111 111122357999999999763
No 300
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.94 E-value=1e-26 Score=250.49 Aligned_cols=178 Identities=24% Similarity=0.313 Sum_probs=128.3
Q ss_pred CCCC-CcccccccceEEEEEEEC--CCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 533 EFSS-SNMIGQGSFGSVYKGILG--EDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 533 ~~~~-~~~ig~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
.|+. .++||+|+||.||+|+++ .+++.||||++.... ....+.+|++++++++||||+++++++.... ....
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHA---DRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETT---TTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCC---CCeE
Confidence 4555 568999999999999975 468899999996442 2357889999999999999999999985432 2478
Q ss_pred eEEEeccCCCCHHHHhcccCC---ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----cCCCce
Q 048668 610 ALVFEYMGNGSLEDWLHQSND---QVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DHDMVA 682 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill----~~~~~~ 682 (725)
|+||||++ |+|.+++..... ......+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999996 588888863321 11122489999999999999999999999 99999999999999 677899
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+.+...... .......+||+.|+|||++.
T Consensus 172 kl~Dfg~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~ 208 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKP-----LADLDPVVVTFWYRAPELLL 208 (405)
T ss_dssp EECCTTCCC---------------------CCCTTCCHHHHT
T ss_pred EEEECCCceecCCCCcc-----cccCCCceecCcccCchhhc
Confidence 99999999876432111 11122357999999999864
No 301
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.9e-25 Score=226.50 Aligned_cols=203 Identities=23% Similarity=0.289 Sum_probs=168.4
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
+++++++++++++ .+|..+. ++|++|+|++|++++..+.+|.++++|++|+|++|+|+.+.+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4789999999998 6777665 689999999999998888889999999999999999987777888999999999999
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCcc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIG 173 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~ 173 (725)
+|+++ .+|...|.++++|++|+|++|+++.+.+..|..+++|++|+|++|+|+++++..|..+++|++|++++|.++.+
T Consensus 94 ~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99998 78888888899999999999999988888899999999999999999988888888889999999999988876
Q ss_pred CCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCC
Q 048668 174 AANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHG 251 (725)
Q Consensus 174 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 251 (725)
++ ..|.++++|++|+|++|++++..+ ..+..+++|+.|+|++|.+..
T Consensus 173 ~~------~~~~~l~~L~~L~L~~N~l~~~~~-------------------------~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 173 PE------GAFDKLTELKTLKLDNNQLKRVPE-------------------------GAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CT------TTTTTCTTCCEEECCSSCCSCCCT-------------------------TTTTTCTTCCEEECCSSCBCC
T ss_pred Ch------hHhccCCCcCEEECCCCcCCcCCH-------------------------HHhccccCCCEEEecCCCeeC
Confidence 55 346678888888888888874333 234455566666666666643
No 302
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.93 E-value=5.5e-27 Score=243.46 Aligned_cols=173 Identities=25% Similarity=0.344 Sum_probs=138.7
Q ss_pred HHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc------chHHHHHHHHHHHHcC----CCCcccceee
Q 048668 527 LSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------GAFRSFVAECEALRNI----RHRNLIKIIT 596 (725)
Q Consensus 527 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~ 596 (725)
.....++|+..+.||+|+||.||+|++..+++.||||++..... .....+.+|+++++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 34456789999999999999999999998999999999965432 1223456799999998 8999999999
Q ss_pred EeecCCCCCcceeeEEEec-cCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCee
Q 048668 597 ICSSTDFKGVDFKALVFEY-MGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 675 (725)
Q Consensus 597 ~~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nil 675 (725)
++.... ..++|||| +++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 106 ~~~~~~-----~~~~v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 171 (312)
T 2iwi_A 106 WFETQE-----GFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENIL 171 (312)
T ss_dssp EC----------CEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEE
T ss_pred EEecCC-----eEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEE
Confidence 975543 78999999 78999999998654 589999999999999999999999 9999999999999
Q ss_pred ec-CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 676 LD-HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 676 l~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++ .++.+||+|||+++...... .....||+.|+|||++
T Consensus 172 ~~~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~ 210 (312)
T 2iwi_A 172 IDLRRGCAKLIDFGSGALLHDEP----------YTDFDGTRVYSPPEWI 210 (312)
T ss_dssp EETTTTEEEECCCSSCEECCSSC----------BCCCCSCTTTSCHHHH
T ss_pred EeCCCCeEEEEEcchhhhcccCc----------ccccCCcccccCceee
Confidence 99 88999999999998764321 1124699999999975
No 303
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.93 E-value=2.9e-26 Score=250.32 Aligned_cols=177 Identities=27% Similarity=0.402 Sum_probs=141.8
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCc-ccceeeEeecCCCCCccee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN-LIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~~ 609 (725)
.++|++.+.||+|+||.||+|++..+++.||||++...... .++.+|+++++.++|++ |+.+..++... +..
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~-----~~~ 78 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEG-----DYN 78 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEET-----TEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeC-----CEE
Confidence 46799999999999999999999989999999998754332 35789999999999755 44444444333 378
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---cCCCceEEcc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVGD 686 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill---~~~~~~kl~D 686 (725)
++||||+ +++|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|
T Consensus 79 ~lvme~~-g~sL~~ll~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~D 149 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCSR-----KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIID 149 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECC
T ss_pred EEEEECC-CCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEe
Confidence 9999999 9999999985432 589999999999999999999999 99999999999999 5889999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|+.+......... ........+||+.|+|||++.
T Consensus 150 FGla~~~~~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~ 186 (483)
T 3sv0_A 150 FGLAKKYRDTSTHQHI-PYRENKNLTGTARYASVNTHL 186 (483)
T ss_dssp CTTCEECBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHT
T ss_pred CCcceeccCCcccccc-ccccccccCCCccccCHHHhc
Confidence 9999877543221110 011122467999999999864
No 304
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.1e-26 Score=266.55 Aligned_cols=168 Identities=26% Similarity=0.390 Sum_probs=140.6
Q ss_pred cCCCCCcccccccceEEEEEEECC-CceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCccee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGE-DEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 609 (725)
++|++.+.||+|+||.||+|++.. +++.||||++.... ....+.+.+|++++++++||||+++++++......+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999975 78999999986443 3345678999999999999999999999876653333336
Q ss_pred eEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccc
Q 048668 610 ALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGL 689 (725)
Q Consensus 610 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgl 689 (725)
|+||||++|++|.+++.. .+++.+++.|+.||+.||+|+|++ +|+||||||+||+++.+ .+||+|||+
T Consensus 160 ~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 999999999999887653 488999999999999999999999 99999999999999986 899999999
Q ss_pred ccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 690 AKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 690 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++..... ...+||++|||||++
T Consensus 228 a~~~~~~------------~~~~gt~~y~aPE~~ 249 (681)
T 2pzi_A 228 VSRINSF------------GYLYGTPGFQAPEIV 249 (681)
T ss_dssp CEETTCC------------SCCCCCTTTSCTTHH
T ss_pred chhcccC------------CccCCCccccCHHHH
Confidence 9865332 125699999999975
No 305
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.93 E-value=1.1e-26 Score=241.86 Aligned_cols=171 Identities=23% Similarity=0.339 Sum_probs=145.0
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccc------hHHHHHHHHHHHHcCC--CCcccceeeEeec
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG------AFRSFVAECEALRNIR--HRNLIKIITICSS 600 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 600 (725)
...++|+..+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456799999999999999999999999999999999754321 2245678999999996 5999999999876
Q ss_pred CCCCCcceeeEEEeccCC-CCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec-C
Q 048668 601 TDFKGVDFKALVFEYMGN-GSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-H 678 (725)
Q Consensus 601 ~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~-~ 678 (725)
.. ..++||||+.+ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++ .
T Consensus 120 ~~-----~~~lv~e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 120 PD-----SFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLN 185 (320)
T ss_dssp SS-----EEEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETT
T ss_pred CC-----cEEEEEEcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCC
Confidence 54 78999999976 89999998654 588999999999999999999999 999999999999999 7
Q ss_pred CCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 679 DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 679 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
++.+||+|||+++...... .....||+.|+|||++
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~----------~~~~~gt~~y~aPE~~ 220 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTV----------YTDFDGTRVYSPPEWI 220 (320)
T ss_dssp TTEEEECCCTTCEECCSSC----------BCCCCSCGGGSCHHHH
T ss_pred CCCEEEeeCcccccccccc----------ccCCCCCccCCChHHh
Confidence 8899999999998764321 1124699999999975
No 306
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.93 E-value=2.1e-26 Score=243.41 Aligned_cols=171 Identities=24% Similarity=0.348 Sum_probs=140.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCCC-CCcc
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTDF-KGVD 607 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 607 (725)
.++|...+.||+|+||.||+|++..+|+.||||++.... ....+++.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999999999999999996542 2335678999999999999999999999865431 1112
Q ss_pred eeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 608 FKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 608 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
..|+||||++ |+|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECST
T ss_pred eEEEEecccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeec
Confidence 4589999997 588887642 478999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|+++..... ....+||+.|+|||++.
T Consensus 171 g~~~~~~~~-----------~~~~~~t~~y~aPE~~~ 196 (353)
T 3coi_A 171 GLARHADAE-----------MTGYVVTRWYRAPEVIL 196 (353)
T ss_dssp TCTTC-------------------CCSBCCSCHHHHS
T ss_pred ccccCCCCC-----------ccccccCcCcCCHHHHh
Confidence 999764321 11246899999999753
No 307
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.7e-25 Score=225.38 Aligned_cols=191 Identities=26% Similarity=0.305 Sum_probs=176.6
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||..+.. ++++|+|++|++++..+..|..+++|++|+|++|+++++.+..|..+++|++|+|++|+++++.+..|.+
T Consensus 30 ~ip~~~~~--~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 107 (270)
T 2o6q_A 30 AIPSNIPA--DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQ 107 (270)
T ss_dssp SCCSCCCT--TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCCCCCC--CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHccc
Confidence 57887774 8999999999999777779999999999999999999888888999999999999999999888889999
Q ss_pred cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCee
Q 048668 84 ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRL 163 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L 163 (725)
+++|++|+|++|+++ .++...|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++++..|..+++|++|
T Consensus 108 l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 186 (270)
T 2o6q_A 108 LVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTL 186 (270)
T ss_dssp CSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEE
Confidence 999999999999998 7888888999999999999999999988889999999999999999999999999999999999
Q ss_pred ecCCccCCccCCCCcccccccCCCCCCCEEECccCccccc
Q 048668 164 NLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGE 203 (725)
Q Consensus 164 ~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 203 (725)
++++|.++.++. ..+..+++|++|+|++|.+...
T Consensus 187 ~L~~N~l~~~~~------~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 187 KLDNNQLKRVPE------GAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp ECCSSCCSCCCT------TTTTTCTTCCEEECCSSCBCCS
T ss_pred ECCCCcCCcCCH------HHhccccCCCEEEecCCCeeCC
Confidence 999999987665 4567899999999999998743
No 308
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.93 E-value=1.2e-26 Score=238.29 Aligned_cols=174 Identities=28% Similarity=0.419 Sum_probs=134.1
Q ss_pred hcCCCCCcccccccceEEEEEEECC-C--ceEEEEEEeecc---ccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGE-D--EMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFK 604 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~-~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 604 (725)
.++|+..+.||+|+||.||+|++.. + +..||||+++.. .....+++.+|++++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 3578999999999999999998632 3 346899998754 234467899999999999999999999997643
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEE
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 684 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl 684 (725)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 94 ---~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 94 ---PMKMVTELAPLGSLLDRLRKHQG-----HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHHGG-----GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEE
T ss_pred ---CceeeEecccCCCHHHHHHhccC-----CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEE
Confidence 36899999999999999976432 588999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 685 GDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 685 ~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+|||+++........ ........||+.|+|||++
T Consensus 163 ~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~ 196 (291)
T 1u46_A 163 GDFGLMRALPQNDDH-----YVMQEHRKVPFAWCAPESL 196 (291)
T ss_dssp CCCTTCEECCC-CCE-----EEC-----CCGGGCCHHHH
T ss_pred ccccccccccccccc-----hhhhccCCCCceeeCchhh
Confidence 999999876433111 0111224588899999975
No 309
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.93 E-value=1.9e-26 Score=256.91 Aligned_cols=179 Identities=26% Similarity=0.420 Sum_probs=146.0
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeecc-ccchHHHHHHHHHHHHcCCCCcccceeeEeecCC-CCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSTD-FKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||||++... .....+++.+|++++++++||||+++++++.... +...+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 46899999999999999999999989999999998754 2334567899999999999999999999865422 222457
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCc---eEEc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---AHVG 685 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~---~kl~ 685 (725)
.|+||||++||+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred EEEEEEeCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 8999999999999999986542 12478888999999999999999999 9999999999999997764 9999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||.|+....... .....||+.|+|||++.
T Consensus 167 DFG~a~~~~~~~~---------~~~~~gt~~Y~APE~l~ 196 (676)
T 3qa8_A 167 DLGYAKELDQGEL---------CTEFVGTLQYLAPELLE 196 (676)
T ss_dssp SCCCCCBTTSCCC---------CCCCCSCCTTCSSCSSC
T ss_pred ccccccccccccc---------cccccCCcccCChHHhc
Confidence 9999987643321 11257999999999863
No 310
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.93 E-value=2.8e-26 Score=246.78 Aligned_cols=174 Identities=22% Similarity=0.362 Sum_probs=141.9
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC--------CCcccceeeEeecCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR--------HRNLIKIITICSSTD 602 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~~~ 602 (725)
.++|++.+.||+|+||+||+|++..+++.||||++... ....+.+.+|++++++++ ||||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999999999999999999643 234567889999999985 788999999876322
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCC--
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-- 680 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~-- 680 (725)
......|+||||+ ++++.+++..... ..+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred -CCCceEEEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 1234789999999 6677777765432 15899999999999999999999853 899999999999999775
Q ss_pred -----------------------------------------------ceEEcccccccccccCCCCCCCCCCcccccccC
Q 048668 681 -----------------------------------------------VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKG 713 (725)
Q Consensus 681 -----------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~g 713 (725)
.+||+|||+|+...... ...+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----------~~~~g 255 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----------TEDIQ 255 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----------CSCCS
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----------ccCCC
Confidence 79999999998764321 12469
Q ss_pred CccccCCCccc
Q 048668 714 TVGYVAPGKFF 724 (725)
Q Consensus 714 t~~y~aPE~~~ 724 (725)
|+.|||||++.
T Consensus 256 t~~y~aPE~~~ 266 (397)
T 1wak_A 256 TRQYRSLEVLI 266 (397)
T ss_dssp CGGGCCHHHHH
T ss_pred CCcccCChhhc
Confidence 99999999863
No 311
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.93 E-value=5.2e-26 Score=238.35 Aligned_cols=172 Identities=23% Similarity=0.336 Sum_probs=123.3
Q ss_pred HhcCCCCC-cccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 530 ATSEFSSS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 530 ~~~~~~~~-~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
..++|.+. +.||+|+||.||+|+++.+++.||||++.... ....+....++.++||||+++++++.... .+...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMH-HGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCce
Confidence 34578884 46999999999999999999999999996431 11122233456678999999999976532 22346
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC---CCceEEc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVG 685 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~---~~~~kl~ 685 (725)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeccCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 8999999999999999986542 2589999999999999999999999 9999999999999986 4559999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+|+...... ....+||+.|+|||++
T Consensus 174 Dfg~~~~~~~~~----------~~~~~~t~~y~aPE~~ 201 (336)
T 3fhr_A 174 DFGFAKETTQNA----------LQTPCYTPYYVAPEVL 201 (336)
T ss_dssp CCTTCEEC------------------------------
T ss_pred ccccceeccccc----------cccCCCCcCccChhhh
Confidence 999998654321 1124689999999986
No 312
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93 E-value=3.1e-26 Score=260.18 Aligned_cols=173 Identities=24% Similarity=0.420 Sum_probs=140.7
Q ss_pred HhcCCCCCcccccccceEEEEEEECCC---ceEEEEEEeeccc-cchHHHHHHHHHHHHcCCCCcccceeeEeecCCCCC
Q 048668 530 ATSEFSSSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSTDFKG 605 (725)
Q Consensus 530 ~~~~~~~~~~ig~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 605 (725)
..++|+..+.||+|+||.||+|++..+ +..||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 345677888999999999999998643 4679999986543 3345789999999999999999999998743
Q ss_pred cceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEc
Q 048668 606 VDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVG 685 (725)
Q Consensus 606 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~ 685 (725)
+..|+||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 463 -~~~~lv~E~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 463 -NPVWIIMELCTLGELRSFLQVRKF-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHTTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 257899999999999999986532 588999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|||+|+........ ......||+.|||||++
T Consensus 534 DFG~a~~~~~~~~~-------~~~~~~~t~~y~aPE~~ 564 (656)
T 2j0j_A 534 DFGLSRYMEDSTYY-------KASKGKLPIKWMAPESI 564 (656)
T ss_dssp CCCCCCSCCC-----------------CCGGGCCHHHH
T ss_pred ecCCCeecCCCcce-------eccCCCCCcceeCHHHh
Confidence 99999876433211 11124578899999975
No 313
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.93 E-value=4.1e-26 Score=239.84 Aligned_cols=169 Identities=22% Similarity=0.376 Sum_probs=141.5
Q ss_pred hcCCCCCcccccccceEEEEEEE-CCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCc------ccceeeEeecCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN------LIKIITICSSTDF 603 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 603 (725)
.++|+..+.||+|+||.||+|++ ..+++.||||+++... ...+.+.+|+++++.++|++ |+++++++....
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 35799999999999999999998 5678999999996432 33467889999999987654 999999876654
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC-----
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH----- 678 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~----- 678 (725)
..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 91 ----~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 91 ----HICIVFELL-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp ----EEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEE
T ss_pred ----cEEEEEcCC-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccc
Confidence 889999999 8899999986542 2578999999999999999999999 9999999999999987
Q ss_pred --------------CCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 679 --------------DMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 679 --------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
++.+||+|||+|+..... ....+||+.|+|||++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~ 207 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVIL 207 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHT
T ss_pred ccCCccccccccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhh
Confidence 668999999999864322 11246999999999863
No 314
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=2.6e-25 Score=227.40 Aligned_cols=187 Identities=24% Similarity=0.243 Sum_probs=143.4
Q ss_pred ccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCc
Q 048668 9 IGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLE 88 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 88 (725)
+.++++++++++++|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.|+++.+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 667788888888888887 5666554 6788888888888877788888888888888888888765443 6788888
Q ss_pred eeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCc
Q 048668 89 YFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168 (725)
Q Consensus 89 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N 168 (725)
+|+|++|+|+ .+|.. +.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++++..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~~-~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLL-GQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCCC-TTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCchh-hccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 8888888887 77753 467888888888888888877778888888888888888888888777777888888888888
Q ss_pred cCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhh
Q 048668 169 NLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIA 209 (725)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 209 (725)
+++.++. ..+.++++|++|+|++|+++ .+|..+.
T Consensus 159 ~l~~l~~------~~~~~l~~L~~L~L~~N~l~-~ip~~~~ 192 (290)
T 1p9a_G 159 NLTELPA------GLLNGLENLDTLLLQENSLY-TIPKGFF 192 (290)
T ss_dssp CCSCCCT------TTTTTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred cCCccCH------HHhcCcCCCCEEECCCCcCC-ccChhhc
Confidence 7776554 34556777777777777776 3444333
No 315
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.93 E-value=7.7e-26 Score=236.48 Aligned_cols=175 Identities=21% Similarity=0.283 Sum_probs=126.4
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc-cchHHHHHHHHH-HHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFRSFVAECE-ALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... .....++..|+. +++.++||||+++++++.... .
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~-----~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG-----D 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-----E
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-----c
Confidence 357888999999999999999999899999999997543 233455666666 677789999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.++||||+++ +|.+++...... ....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eEEEEeecCC-ChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCC
Confidence 8999999975 888877631100 0125889999999999999999999852 79999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 689 LAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 689 la~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+++....... .....||+.|+|||++
T Consensus 172 ~~~~~~~~~~---------~~~~~gt~~y~aPE~~ 197 (327)
T 3aln_A 172 ISGQLVDSIA---------KTRDAGCRPYMAPERI 197 (327)
T ss_dssp SSCC-------------------------------
T ss_pred Cceecccccc---------cccCCCCccccCceee
Confidence 9986643211 1123699999999986
No 316
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4e-29 Score=283.99 Aligned_cols=404 Identities=14% Similarity=0.109 Sum_probs=266.0
Q ss_pred ccCcccCcEEecCCCccCc---cCCc------------cccCCCCCcEEEccCCcCCccCCCCCC-CCCCCCEEEccCC-
Q 048668 9 IGSLFKLQALALAGNYLTG---KLPD------------FIGNLSALQVIHIKGNSLGGKFPTTLG-LLRNLVQLNVAEN- 71 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~---~~~~------------~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls~N- 71 (725)
+..+++|++|++++|.... ..|. .+..+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~ 141 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE 141 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC
Confidence 4567789999999985321 2222 235688999999999999877666665 6889999999999
Q ss_pred ccccc-CcccccccCCCceeeccCCCCCCCCCh---hhhcCCCCccEEEccCceeeeeCCCc----ccccCccceecCCC
Q 048668 72 KFYGM-FPRSICNISSLEYFYLTSNRFSGSLPF---DIVVNLPNLKELGIGANNFFGLIPDS----LSNASNLELLDLSN 143 (725)
Q Consensus 72 ~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~~l~~L~~L~L~~N~i~~~~~~~----~~~l~~L~~L~Ls~ 143 (725)
.++.. ++..+.++++|++|+|++|.+++..+. .+...+++|++|+|++|. ..+.... +..+++|++|+|++
T Consensus 142 ~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 142 GFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCC
Confidence 56543 445556899999999999998743322 223467799999999987 2121222 34569999999999
Q ss_pred c-cccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEE-ECccCcccccCChhhhhccccceeEEec
Q 048668 144 N-QFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVL-SLSDNQFGGELPHSIANLSSTMIVFLIG 221 (725)
Q Consensus 144 N-~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~~l~~L~l~ 221 (725)
| .+.+ .+..+..+++|++|+++.+........-...+..+.++++|+.| .+.+... +.++..+..++ +|+.|+++
T Consensus 221 ~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~-~L~~L~L~ 297 (594)
T 2p1m_B 221 AVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCS-RLTTLNLS 297 (594)
T ss_dssp TSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHT-TCCEEECT
T ss_pred CCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccch-hhHHHHHHhhC-CCCEEEcc
Confidence 8 5554 44567778899999977654210000000112346677888888 4443332 24444444555 78888888
Q ss_pred CccceeccC-cccccccCCceEEecccccCCC-CChhhcCCCCccEEeccC---------cccccCCCCCCc-CCCCCCE
Q 048668 222 GNQISGTIP-LGIRNLVNLIALAVEVNQLHGT-IPDVIGELKNLQLLGLYK---------NFLQGSIPSGLG-NLTKLAK 289 (725)
Q Consensus 222 ~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~ 289 (725)
+|.+.+... ..+..+++|++|++++| +... .+.....+++|++|++++ +.+++.....+. .+++|++
T Consensus 298 ~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~ 376 (594)
T 2p1m_B 298 YATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLES 376 (594)
T ss_dssp TCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCE
T ss_pred CCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHH
Confidence 888664432 23457788888888887 4322 223334578888888833 444432222222 3788888
Q ss_pred EeCCCCcCCCccccccccccccccccccc-cccccceeccc--C----CccCCC-----cchhhhcCCCCCeEEccCccc
Q 048668 290 LDLGSNSLQGNFIASQNKLIGALPQQLLS-ITTLSLYLDLS--N----NLLNGS-----LPQQVGNLKNLIILDISSNQF 357 (725)
Q Consensus 290 L~L~~N~l~~~~~~~~~~~~~~~p~~~~~-~~~ll~~L~L~--~----n~l~~~-----~~~~~~~l~~L~~L~Ls~N~l 357 (725)
|+++.|.+++ ..+..+.. ...+ +.|+++ + |.+++. ++..+..+++|+.|+|++ .+
T Consensus 377 L~~~~~~l~~-----------~~~~~l~~~~~~L-~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l 443 (594)
T 2p1m_B 377 VLYFCRQMTN-----------AALITIARNRPNM-TRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LL 443 (594)
T ss_dssp EEEEESCCCH-----------HHHHHHHHHCTTC-CEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SC
T ss_pred HHHhcCCcCH-----------HHHHHHHhhCCCc-ceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cc
Confidence 8887776652 22222222 2333 778887 3 555532 222367788999999977 67
Q ss_pred cccCcccccc-ccCCcEEEccCCccccccCccc-cCCCCCCEEeCCCCcccccCcc-cccCCCCCCeEEcccccCe
Q 048668 358 SGMIPVTLST-CVSLEYVDISSNCFHGIIPPSL-GFLKSIKFLDVSCNNFSGQFPK-FLENLSFLEFLNLSYNHLE 430 (725)
Q Consensus 358 ~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~ 430 (725)
++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++.... ....+++|+.|++++|+++
T Consensus 444 ~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 444 TDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred cHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 6655556655 7889999999999876655555 5688999999999998654443 3456888999999999884
No 317
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.93 E-value=8.1e-27 Score=243.04 Aligned_cols=180 Identities=24% Similarity=0.381 Sum_probs=140.7
Q ss_pred HHHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeecCC
Q 048668 525 AELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSTD 602 (725)
Q Consensus 525 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 602 (725)
+++....++|+..+.||+|+||.||+|++.. .||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 3334456789999999999999999999864 39999997542 233456778999999999999999999987654
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCce
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 682 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~ 682 (725)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++ ++.+
T Consensus 103 -----~~~iv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~ 168 (319)
T 2y4i_B 103 -----HLAIITSLCKGRTLYSVVRDAKI-----VLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKV 168 (319)
T ss_dssp -----CEEEECBCCCSEEHHHHTTSSCC-----CCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CC
T ss_pred -----ceEEEeecccCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCE
Confidence 68999999999999999976542 588899999999999999999999 999999999999998 6799
Q ss_pred EEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 683 HVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 683 kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
||+|||+|+......... .........||+.|+|||++.
T Consensus 169 ~l~Dfg~~~~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~ 207 (319)
T 2y4i_B 169 VITDFGLFSISGVLQAGR---REDKLRIQNGWLCHLAPEIIR 207 (319)
T ss_dssp EECCCSCCC-------------CCSCBCCSGGGGTSCHHHHS
T ss_pred EEeecCCccccccccccc---cccccccCCCcccccChHHhh
Confidence 999999987653221111 111122346999999999863
No 318
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=3.2e-28 Score=276.51 Aligned_cols=411 Identities=13% Similarity=0.101 Sum_probs=289.7
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCc---cCCCC------------CCCCCCCCEEEccCCcccccCcc
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGG---KFPTT------------LGLLRNLVQLNVAENKFYGMFPR 79 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~~~~~------------~~~l~~L~~L~Ls~N~l~~~~~~ 79 (725)
.+.++++++... .....+..+++|++|++++|.... ..|.. +..+++|++|+|++|.+++..+.
T Consensus 45 ~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~ 123 (594)
T 2p1m_B 45 RRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLE 123 (594)
T ss_dssp CCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHH
T ss_pred ceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHH
Confidence 346677666543 334578889999999999986321 22222 24578999999999999877777
Q ss_pred ccc-ccCCCceeeccCC-CCCCCCChhhhcCCCCccEEEccCceeeeeCCCccc----ccCccceecCCCccccccCccC
Q 048668 80 SIC-NISSLEYFYLTSN-RFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLS----NASNLELLDLSNNQFKGKVSID 153 (725)
Q Consensus 80 ~~~-~l~~L~~L~L~~N-~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~----~l~~L~~L~Ls~N~i~~~~~~~ 153 (725)
.+. .+++|++|+|++| .+++.....++.++++|++|+|++|.++...+..+. .+++|++|+|++|. ..+....
T Consensus 124 ~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~ 202 (594)
T 2p1m_B 124 LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSA 202 (594)
T ss_dssp HHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHH
T ss_pred HHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHH
Confidence 775 7999999999999 565222234456899999999999999876544443 66799999999998 3344344
Q ss_pred cc----cccccCeeecCCcc-CCccCCCCcccccccCCCCCCCEEECccC-------cccccCChhhhhccccceeEE-e
Q 048668 154 FS----SLKILWRLNLEQNN-LGIGAANDLGFVTFLTNCSSLKVLSLSDN-------QFGGELPHSIANLSSTMIVFL-I 220 (725)
Q Consensus 154 f~----~l~~L~~L~L~~N~-l~~~~~~~~~~~~~~~~l~~L~~L~L~~N-------~l~~~~p~~~~~l~~~l~~L~-l 220 (725)
+. .+++|++|++++|. +.. ++..+.++++|++|+++.+ .+.+ ++..+.+++ +|+.+. +
T Consensus 203 l~~l~~~~~~L~~L~L~~~~~~~~-------l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~-~L~~Ls~~ 273 (594)
T 2p1m_B 203 LERLVTRCPNLKSLKLNRAVPLEK-------LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCK-ELRCLSGF 273 (594)
T ss_dssp HHHHHHHCTTCCEEECCTTSCHHH-------HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCT-TCCEEECC
T ss_pred HHHHHHhCCCCcEEecCCCCcHHH-------HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCC-CcccccCC
Confidence 43 45999999999983 221 3456778899999996544 4443 445666666 777773 3
Q ss_pred cCccceeccCcccccccCCceEEecccccCCCC-ChhhcCCCCccEEeccCcccccC-CCCCCcCCCCCCEEeCCC----
Q 048668 221 GGNQISGTIPLGIRNLVNLIALAVEVNQLHGTI-PDVIGELKNLQLLGLYKNFLQGS-IPSGLGNLTKLAKLDLGS---- 294 (725)
Q Consensus 221 ~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~---- 294 (725)
.+... ..++..+..+++|++|+|++|.+++.. ...+..+++|++|++++| +... ++.....+++|++|++.+
T Consensus 274 ~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~ 351 (594)
T 2p1m_B 274 WDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPF 351 (594)
T ss_dssp BTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTT
T ss_pred cccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccc
Confidence 33222 345555667899999999999976432 334668899999999998 4422 222233588999999843
Q ss_pred -----CcCCCccccccccccccccccccc-cccccceecccCCccCCCcchhhh-cCCCCCeEEcc--C----ccccccC
Q 048668 295 -----NSLQGNFIASQNKLIGALPQQLLS-ITTLSLYLDLSNNLLNGSLPQQVG-NLKNLIILDIS--S----NQFSGMI 361 (725)
Q Consensus 295 -----N~l~~~~~~~~~~~~~~~p~~~~~-~~~ll~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~ 361 (725)
+.+++ .-...+.. ...+ ++|.++.|.+++..+..+. .+++|+.|+++ + |.+++..
T Consensus 352 g~~~~~~l~~-----------~~l~~l~~~~~~L-~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 352 VMEPNVALTE-----------QGLVSVSMGCPKL-ESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CSSCSSCCCH-----------HHHHHHHHHCTTC-CEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred ccccCCCCCH-----------HHHHHHHHhchhH-HHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 33331 11111222 3334 7888889999876666665 58999999999 4 6666322
Q ss_pred -----ccccccccCCcEEEccCCccccccCccccC-CCCCCEEeCCCCcccccCcccc-cCCCCCCeEEcccccCeeecC
Q 048668 362 -----PVTLSTCVSLEYVDISSNCFHGIIPPSLGF-LKSIKFLDVSCNNFSGQFPKFL-ENLSFLEFLNLSYNHLEGEVP 434 (725)
Q Consensus 362 -----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p 434 (725)
+..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|++|+|++|++++..+
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 22367789999999988 677666666665 8999999999999987655555 678999999999999964433
Q ss_pred C--CCccCCCCCcCccCCc
Q 048668 435 T--KGVFSNKSKIPLQGNV 451 (725)
Q Consensus 435 ~--~~~~~~~~~~~~~~n~ 451 (725)
. ...++.++.+++++|+
T Consensus 499 ~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHTGGGGGGSSEEEEESSC
T ss_pred HHHHHhCCCCCEEeeeCCC
Confidence 2 2346788888888874
No 319
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=1.6e-25 Score=222.65 Aligned_cols=196 Identities=17% Similarity=0.208 Sum_probs=115.2
Q ss_pred CCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCc-ccccCcccccccCCCceeeccC-CCCCCCCChhhhcCCCCccEE
Q 048668 38 ALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENK-FYGMFPRSICNISSLEYFYLTS-NRFSGSLPFDIVVNLPNLKEL 115 (725)
Q Consensus 38 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~l~~L~~L 115 (725)
+|++|++++|+++++.+..|.++++|++|+|++|+ ++.+.+.+|.++++|++|++++ |+|+ .+|...|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHHhCCCCCCCEE
Confidence 56666666666665555566666666666666664 6555555666666666666665 6665 5555555666666666
Q ss_pred EccCceeeeeCCCcccccCccc---eecCCCc-cccccCccCcccccccC-eeecCCccCCccCCCCcccccccCCCCCC
Q 048668 116 GIGANNFFGLIPDSLSNASNLE---LLDLSNN-QFKGKVSIDFSSLKILW-RLNLEQNNLGIGAANDLGFVTFLTNCSSL 190 (725)
Q Consensus 116 ~L~~N~i~~~~~~~~~~l~~L~---~L~Ls~N-~i~~~~~~~f~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~~~~l~~L 190 (725)
+|++|+++++ |. |..+++|+ +|++++| +++++++..|..+++|+ +|++++|.++.++. ..+.. ++|
T Consensus 111 ~l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~------~~~~~-~~L 181 (239)
T 2xwt_C 111 GIFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQG------YAFNG-TKL 181 (239)
T ss_dssp EEEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECT------TTTTT-CEE
T ss_pred eCCCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCH------hhcCC-CCC
Confidence 6666666553 33 55555555 6666666 66666666666666666 66666666654443 12223 566
Q ss_pred CEEECccCc-ccccCChhhhhc-cccceeEEecCccceeccCcccccccCCceEEeccc
Q 048668 191 KVLSLSDNQ-FGGELPHSIANL-SSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVN 247 (725)
Q Consensus 191 ~~L~L~~N~-l~~~~p~~~~~l-~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N 247 (725)
++|++++|+ +++..+..|..+ + .++.|++++|.+++ +|.. .+++|+.|+++++
T Consensus 182 ~~L~L~~n~~l~~i~~~~~~~l~~-~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 182 DAVYLNKNKYLTVIDKDAFGGVYS-GPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp EEEECTTCTTCCEECTTTTTTCSB-CCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CEEEcCCCCCcccCCHHHhhcccc-CCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 666666663 664444555555 4 56666666666663 3322 4556667766554
No 320
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.6e-25 Score=227.15 Aligned_cols=229 Identities=22% Similarity=0.268 Sum_probs=157.5
Q ss_pred ccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeec
Q 048668 13 FKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYL 92 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 92 (725)
..+..+++..+.+... ..+..+++|+.|++++|.++. . ..+..+++|++|+|++|.+++. ..+..+++|++|+|
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEEC
Confidence 3455566666665532 334566677777777777762 2 3466677777777777777642 35677777777777
Q ss_pred cCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCc
Q 048668 93 TSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGI 172 (725)
Q Consensus 93 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~ 172 (725)
++|+++ .++...|.++++|++|+|++|+++++.+..|..+++|++|+|++|+|+++++..|..+++|++|++++|.++.
T Consensus 93 ~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 93 TGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 777776 5666666677777777777777777666667777777777777777777777667777777777777777765
Q ss_pred cCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCC
Q 048668 173 GAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT 252 (725)
Q Consensus 173 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 252 (725)
+++ ..+.++++|++|++++|++++..|..+..++ .|+.|++++|.+.+. +++|+.|++..|.+.|.
T Consensus 172 ~~~------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ 237 (272)
T 3rfs_A 172 LPE------GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT-SLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGV 237 (272)
T ss_dssp CCT------TTTTTCTTCCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGG
T ss_pred cCH------HHhcCCccCCEEECCCCcCCccCHHHHhCCc-CCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCc
Confidence 543 3355677777777777777766665566666 677777777776643 44678888888888888
Q ss_pred CChhhcCCCC
Q 048668 253 IPDVIGELKN 262 (725)
Q Consensus 253 ~~~~~~~l~~ 262 (725)
+|.+++.+..
T Consensus 238 ip~~~~~~~~ 247 (272)
T 3rfs_A 238 VRNSAGSVAP 247 (272)
T ss_dssp BBCTTSCBCG
T ss_pred ccCcccccCC
Confidence 8888777654
No 321
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.93 E-value=1e-25 Score=240.67 Aligned_cols=173 Identities=26% Similarity=0.339 Sum_probs=141.9
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-CC-----cccceeeEeecCC
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HR-----NLIKIITICSSTD 602 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 602 (725)
...++|+..+.||+|+||+||+|++..+++.||||+++.. ....+++.+|+++++.++ |+ +|+++++++....
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3457899999999999999999999999999999999743 233467788999988885 55 4899999876654
Q ss_pred CCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec--CCC
Q 048668 603 FKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD--HDM 680 (725)
Q Consensus 603 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~--~~~ 680 (725)
..|+||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++
T Consensus 130 -----~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 130 -----HLCLVFEMLS-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp -----EEEEEEECCC-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred -----ceEEEEecCC-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 8899999996 599999986542 1589999999999999999999953 23899999999999995 477
Q ss_pred ceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 681 VAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 681 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
.+||+|||+|+..... ....+||+.|+|||++.
T Consensus 199 ~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~ 231 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR-----------IYQYIQSRFYRSPEVLL 231 (382)
T ss_dssp CEEECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHT
T ss_pred cEEEEeccCceecccc-----------cccccCCccccChHHHc
Confidence 8999999999876322 11256999999999864
No 322
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.92 E-value=8.2e-26 Score=234.69 Aligned_cols=173 Identities=25% Similarity=0.417 Sum_probs=139.5
Q ss_pred HHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccc--cchHHHHHHHHHHHHcCC--CCcccceeeEeecCCC
Q 048668 528 SKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFRSFVAECEALRNIR--HRNLIKIITICSSTDF 603 (725)
Q Consensus 528 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 603 (725)
....++|+..+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++ ||||+++++++....
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~- 101 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ- 101 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS-
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC-
Confidence 334567999999999999999999986 58899999997543 334578899999999997 599999999987654
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceE
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 683 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~k 683 (725)
..|+||| +.+++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++ +.+|
T Consensus 102 ----~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~k 166 (313)
T 3cek_A 102 ----YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLK 166 (313)
T ss_dssp ----EEEEEEC-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEE
T ss_pred ----EEEEEEe-cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEE
Confidence 7899999 55889999998654 588999999999999999999999 9999999999999964 8999
Q ss_pred EcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 684 VGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 684 l~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+|||+++........ ......+||+.|+|||++
T Consensus 167 L~Dfg~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~ 200 (313)
T 3cek_A 167 LIDFGIANQMQPDTTS------VVKDSQVGTVNYMPPEAI 200 (313)
T ss_dssp ECCCSSSCC--------------------CCGGGCCHHHH
T ss_pred EeeccccccccCcccc------ccccCCCCCCCcCCHHHH
Confidence 9999999876433211 111235699999999986
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.3e-25 Score=227.91 Aligned_cols=228 Identities=20% Similarity=0.201 Sum_probs=140.1
Q ss_pred CCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEc
Q 048668 38 ALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGI 117 (725)
Q Consensus 38 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 117 (725)
.+..+++.++.+... ..+..+++|+.|++++|.++. ...+..+++|++|+|++|+++ .++ .+..+++|++|+|
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~-~~~--~l~~l~~L~~L~L 92 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLH-DIS--ALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCC-CCG--GGTTCTTCCEEEC
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCC-Cch--hhcCCCCCCEEEC
Confidence 444555666655533 234456666666666666652 223666666666666666665 333 3456666666666
Q ss_pred cCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECcc
Q 048668 118 GANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSD 197 (725)
Q Consensus 118 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~ 197 (725)
++|.++++.+..|..+++|++|+|++|+++++++..|..+++|++|++++|.++.+++ ..+.++++|++|++++
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~------~~~~~l~~L~~L~l~~ 166 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPK------GVFDKLTNLTELDLSY 166 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT------TTTTTCTTCCEEECCS
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCH------HHhccCccCCEEECCC
Confidence 6666666666666666666666666666666666666666666666666666665443 3345666666666666
Q ss_pred CcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCC
Q 048668 198 NQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSI 277 (725)
Q Consensus 198 N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 277 (725)
|++++..+..+..++ .|+.|++++|.+++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|.+.|.+
T Consensus 167 n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~i 238 (272)
T 3rfs_A 167 NQLQSLPEGVFDKLT-QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVV 238 (272)
T ss_dssp SCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGB
T ss_pred CCcCccCHHHhcCCc-cCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcc
Confidence 666655555555555 666666666666666565666666666666666665532 335666666666666666
Q ss_pred CCCCcCCCC
Q 048668 278 PSGLGNLTK 286 (725)
Q Consensus 278 ~~~~~~l~~ 286 (725)
|..++.++.
T Consensus 239 p~~~~~~~~ 247 (272)
T 3rfs_A 239 RNSAGSVAP 247 (272)
T ss_dssp BCTTSCBCG
T ss_pred cCcccccCC
Confidence 666655543
No 324
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=9.8e-25 Score=223.11 Aligned_cols=206 Identities=22% Similarity=0.212 Sum_probs=132.0
Q ss_pred cCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCc
Q 048668 184 LTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNL 263 (725)
Q Consensus 184 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 263 (725)
+.++++++++++++|.++ .+|..+. ++++.|+|++|.+++..+..|..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---------------------------~~l~~L~L~~N~l~~~~~~~~~~l~~L 57 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---------------------------KDTTILHLSENLLYTFSLATLMPYTRL 57 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---------------------------TTCCEEECTTSCCSEEEGGGGTTCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---------------------------CCCCEEEcCCCcCCccCHHHhhcCCCC
Confidence 456778888888888887 3443221 345555555555555555555555555
Q ss_pred cEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhc
Q 048668 264 QLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGN 343 (725)
Q Consensus 264 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~ 343 (725)
++|+|++|.+++..+. ..+++|++|++++|+|+ .+|..+..+..+ ++|++++|++++..+..|..
T Consensus 58 ~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~------------~l~~~~~~l~~L-~~L~l~~N~l~~l~~~~~~~ 122 (290)
T 1p9a_G 58 TQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ------------SLPLLGQTLPAL-TVLDVSFNRLTSLPLGALRG 122 (290)
T ss_dssp CEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS------------SCCCCTTTCTTC-CEEECCSSCCCCCCSSTTTT
T ss_pred CEEECCCCccCcccCC--CCCCcCCEEECCCCcCC------------cCchhhccCCCC-CEEECCCCcCcccCHHHHcC
Confidence 5555555555533221 45555556666555544 334333333333 45555555555555666777
Q ss_pred CCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEE
Q 048668 344 LKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLN 423 (725)
Q Consensus 344 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 423 (725)
+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.++
T Consensus 123 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~ 201 (290)
T 1p9a_G 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAF 201 (290)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEE
T ss_pred CCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEE
Confidence 777888888888887776677777777888888888887666666777778888888888877 5666666667777888
Q ss_pred cccccCeeec
Q 048668 424 LSYNHLEGEV 433 (725)
Q Consensus 424 l~~N~l~~~~ 433 (725)
|++|+|.|.+
T Consensus 202 L~~Np~~C~c 211 (290)
T 1p9a_G 202 LHGNPWLCNC 211 (290)
T ss_dssp CCSCCBCCSG
T ss_pred eCCCCccCcC
Confidence 8777777655
No 325
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=233.30 Aligned_cols=170 Identities=20% Similarity=0.306 Sum_probs=126.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccc--hHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|+..+.||+|+||.||+|++..+++.||||++...... ..+.+.++..+++.++||||+++++++.... .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-----~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT-----D 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----E
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC-----c
Confidence 45788899999999999999999989999999999755322 2234445556788889999999999987654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCCeeecCCCceEEccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVGDF 687 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~ivHrdlkp~Nill~~~~~~kl~Df 687 (725)
.|+||||+ ++.+..+...... .+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+||
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQG-----PIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecc-CCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 89999999 5566655543321 58899999999999999999998 5 8999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 688 GLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 688 gla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
|+++....... .....||+.|+|||++
T Consensus 170 g~~~~~~~~~~---------~~~~~~~~~y~aPE~~ 196 (318)
T 2dyl_A 170 GISGRLVDDKA---------KDRSAGCAAYMAPERI 196 (318)
T ss_dssp TTC-----------------------CCTTCCHHHH
T ss_pred CCchhccCCcc---------ccccCCCccccChhhc
Confidence 99976543211 1124699999999986
No 326
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=1.5e-26 Score=245.10 Aligned_cols=256 Identities=20% Similarity=0.252 Sum_probs=163.7
Q ss_pred EEecCCCccCccCCccccCCCCCcEEEccCCcCCccCC----CCCCCCC-CCCEEEccCCcccccCccccccc-----CC
Q 048668 17 ALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFP----TTLGLLR-NLVQLNVAENKFYGMFPRSICNI-----SS 86 (725)
Q Consensus 17 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l-----~~ 86 (725)
.+++++|.+++.+|..+...++|++|+|++|++++..+ .+|..++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36788888888888877777779999999999886666 6777887 89999999998887777777775 88
Q ss_pred CceeeccCCCCCCCCChhh----hcCC-CCccEEEccCceeeeeCCCccc----c-cCccceecCCCccccccCccCc--
Q 048668 87 LEYFYLTSNRFSGSLPFDI----VVNL-PNLKELGIGANNFFGLIPDSLS----N-ASNLELLDLSNNQFKGKVSIDF-- 154 (725)
Q Consensus 87 L~~L~L~~N~l~~~~~~~~----~~~l-~~L~~L~L~~N~i~~~~~~~~~----~-l~~L~~L~Ls~N~i~~~~~~~f-- 154 (725)
|++|+|++|+++ ..+... +..+ ++|++|+|++|+|+...+..+. . .++|++|+|++|+|++.....+
T Consensus 82 L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 82 VTSLNLSGNFLS-YKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp CCEEECCSSCGG-GSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ccEEECcCCcCC-hHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 889999988887 343332 3334 7888888888888766554443 3 2578888888888876544333
Q ss_pred --cccc-ccCeeecCCccCCccCCCCcccccccCCC-CCCCEEECccCccccc----CChhhhhccccceeEEecCccce
Q 048668 155 --SSLK-ILWRLNLEQNNLGIGAANDLGFVTFLTNC-SSLKVLSLSDNQFGGE----LPHSIANLSSTMIVFLIGGNQIS 226 (725)
Q Consensus 155 --~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~~~l-~~L~~L~L~~N~l~~~----~p~~~~~l~~~l~~L~l~~n~i~ 226 (725)
..++ +|++|+|++|.++...+.. +...+... ++|++|+|++|.+++. ++..+....
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~--l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~-------------- 224 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAE--LAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIP-------------- 224 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHH--HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSC--------------
T ss_pred HHhcCCccccEeeecCCCCchhhHHH--HHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCC--------------
Confidence 3333 6777777777776544321 11233444 4777777777777642 222333222
Q ss_pred eccCcccccccCCceEEecccccCCCCC----hhhcCCCCccEEeccCccccc-------CCCCCCcCCCCCCEEeCCCC
Q 048668 227 GTIPLGIRNLVNLIALAVEVNQLHGTIP----DVIGELKNLQLLGLYKNFLQG-------SIPSGLGNLTKLAKLDLGSN 295 (725)
Q Consensus 227 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~-------~~~~~~~~l~~L~~L~L~~N 295 (725)
++|++|+|++|.+++..+ ..+..+++|++|+|++|.+.+ .++..+..+++|+.||+++|
T Consensus 225 ----------~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N 294 (362)
T 3goz_A 225 ----------NHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGK 294 (362)
T ss_dssp ----------TTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSC
T ss_pred ----------CCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCC
Confidence 245555555555554333 223444555555555555322 12234555666666666666
Q ss_pred cCCC
Q 048668 296 SLQG 299 (725)
Q Consensus 296 ~l~~ 299 (725)
.+.+
T Consensus 295 ~l~~ 298 (362)
T 3goz_A 295 EIHP 298 (362)
T ss_dssp BCCG
T ss_pred cCCC
Confidence 6654
No 327
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.92 E-value=2.1e-25 Score=236.09 Aligned_cols=169 Identities=24% Similarity=0.374 Sum_probs=139.5
Q ss_pred hcCCCCCcccccccceEEEEEEECCCc-eEEEEEEeeccccchHHHHHHHHHHHHcCCCCc------ccceeeEeecCCC
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDE-MIVAVKVINLKQKGAFRSFVAECEALRNIRHRN------LIKIITICSSTDF 603 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 603 (725)
.++|+..+.||+|+||.||+|++..++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 358999999999999999999997766 78999999643 233467889999999997766 888888876554
Q ss_pred CCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee-------
Q 048668 604 KGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL------- 676 (725)
Q Consensus 604 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill------- 676 (725)
..++||||+ ++++.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 96 ----~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 96 ----HMCIAFELL-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp ----EEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEE
T ss_pred ----eEEEEEecc-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccc
Confidence 789999999 6788888765432 2589999999999999999999999 99999999999999
Q ss_pred ------------cCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 677 ------------DHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 677 ------------~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
+.++.+||+|||+|+...... ...+||+.|+|||++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------~~~~gt~~y~aPE~~~ 212 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-----------TTIVATRHYRPPEVIL 212 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSCC-----------CSSCSCGGGCCHHHHT
T ss_pred cccccccccccccCCCcEEEeecCccccccccc-----------cCCcCCCcccCCeeee
Confidence 567899999999998643221 1256999999999863
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=4.6e-25 Score=219.36 Aligned_cols=211 Identities=17% Similarity=0.214 Sum_probs=160.1
Q ss_pred EccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCC-CCCCCChhhhcCCCCccEEEccC-c
Q 048668 43 HIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNR-FSGSLPFDIVVNLPNLKELGIGA-N 120 (725)
Q Consensus 43 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~l~~L~~L~L~~-N 120 (725)
++..++++ .+|. +. .+|++|+|++|+|+++.+..|.++++|++|++++|+ ++ .++...|.++++|++|+|++ |
T Consensus 17 ~v~c~~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n 91 (239)
T 2xwt_C 17 RVTCKDIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTR 91 (239)
T ss_dssp EEEECSCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEET
T ss_pred eeEccCcc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCC
Confidence 33344465 4555 54 489999999999998888899999999999999997 87 88888889999999999998 9
Q ss_pred eeeeeCCCcccccCccceecCCCccccccCccCcccccccC---eeecCCc-cCCccCCCCcccccccCCCCCCC-EEEC
Q 048668 121 NFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILW---RLNLEQN-NLGIGAANDLGFVTFLTNCSSLK-VLSL 195 (725)
Q Consensus 121 ~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~---~L~L~~N-~l~~~~~~~~~~~~~~~~l~~L~-~L~L 195 (725)
+++++.+..|.++++|++|+|++|++++++. |..+++|+ +|++++| .++.++. ..|.++++|+ +|++
T Consensus 92 ~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~------~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 92 NLTYIDPDALKELPLLKFLGIFNTGLKMFPD--LTKVYSTDIFFILEITDNPYMTSIPV------NAFQGLCNETLTLKL 163 (239)
T ss_dssp TCCEECTTSEECCTTCCEEEEEEECCCSCCC--CTTCCBCCSEEEEEEESCTTCCEECT------TTTTTTBSSEEEEEC
T ss_pred CeeEcCHHHhCCCCCCCEEeCCCCCCccccc--cccccccccccEEECCCCcchhhcCc------ccccchhcceeEEEc
Confidence 9999988899999999999999999998764 88888888 9999999 8887665 4577889999 9999
Q ss_pred ccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccc-cCCCCChhhcCC-CCccEEeccCccc
Q 048668 196 SDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ-LHGTIPDVIGEL-KNLQLLGLYKNFL 273 (725)
Q Consensus 196 ~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l 273 (725)
++|+++ .+|..... . ++|+.|++++|+ ++++.+..|.++ ++|++|++++|++
T Consensus 164 ~~n~l~-~i~~~~~~------------------------~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l 217 (239)
T 2xwt_C 164 YNNGFT-SVQGYAFN------------------------G-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217 (239)
T ss_dssp CSCCCC-EECTTTTT------------------------T-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCC
T ss_pred CCCCCc-ccCHhhcC------------------------C-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcc
Confidence 999988 34332222 2 455566666663 655555566666 6666666666666
Q ss_pred ccCCCCCCcCCCCCCEEeCCCC
Q 048668 274 QGSIPSGLGNLTKLAKLDLGSN 295 (725)
Q Consensus 274 ~~~~~~~~~~l~~L~~L~L~~N 295 (725)
++..+. .+++|+.|+++++
T Consensus 218 ~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 218 TALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCCCT---TCTTCSEEECTTC
T ss_pred ccCChh---HhccCceeeccCc
Confidence 633222 4556666666654
No 329
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.92 E-value=9.3e-26 Score=244.75 Aligned_cols=173 Identities=25% Similarity=0.303 Sum_probs=125.8
Q ss_pred CCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCcceeeEE
Q 048668 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKALV 612 (725)
Q Consensus 534 ~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv 612 (725)
|...+.||+|+||+||.+.. .+|+.||||++... ..+.+.+|+++++++ +||||+++++++.... ..|+|
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-----~~~lv 87 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDR-----FLYIA 87 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS-----EEEEE
T ss_pred eeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC-----eEEEE
Confidence 44568899999999986544 47899999998653 235678999999986 8999999999876544 78999
Q ss_pred EeccCCCCHHHHhcccCCccccc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCC------------
Q 048668 613 FEYMGNGSLEDWLHQSNDQVEVC-KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD------------ 679 (725)
Q Consensus 613 ~e~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~------------ 679 (725)
||||+ |+|.+++.......... ..++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCC
Confidence 99995 69999998654221111 123445678999999999999999 99999999999999754
Q ss_pred -CceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 680 -MVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 680 -~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
+.+||+|||+|+......... .......+||+.|||||++
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~ 204 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSF----RTNLNNPSGTSGWRAPELL 204 (434)
T ss_dssp SCEEEECCCTTCEECCC------------------CCTTSCHHHH
T ss_pred ceEEEEcccccceecCCCCccc----eeeecCCCCCCCccCHHHh
Confidence 489999999998765432111 0112235799999999986
No 330
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.92 E-value=1.3e-25 Score=239.36 Aligned_cols=173 Identities=20% Similarity=0.344 Sum_probs=142.3
Q ss_pred hcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-----------CCcccceeeEee
Q 048668 531 TSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-----------HRNLIKIITICS 599 (725)
Q Consensus 531 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 599 (725)
.++|+..+.||+|+||.||+|++..+++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357999999999999999999999999999999996432 23467889999999886 899999999976
Q ss_pred cCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeec--
Q 048668 600 STDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-- 677 (725)
Q Consensus 600 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~-- 677 (725)
... ......++||||+ +++|.+++...... .+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEHR----GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhhcc----CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 542 1223689999999 88999999865422 5889999999999999999999853 899999999999994
Q ss_pred ----CCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 678 ----HDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 678 ----~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
..+.+||+|||+|+...... ...+||+.|+|||++
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~~-----------~~~~~t~~y~aPE~~ 207 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEHY-----------TNSIQTREYRSPEVL 207 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBCC-----------CSCCSCGGGCCHHHH
T ss_pred CCCcCcceEEEcccccccccCCCC-----------CCCCCCccccCcHHH
Confidence 34589999999998664321 124699999999986
No 331
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.92 E-value=2.3e-25 Score=240.86 Aligned_cols=170 Identities=26% Similarity=0.385 Sum_probs=129.3
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcC-CCCcccceeeEeecCCCCCcceee
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~ 610 (725)
.+|+..+.||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +||||+++++++.... ..|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-----~~~ 94 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ-----FQY 94 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT-----EEE
T ss_pred EEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC-----EEE
Confidence 4688889999999998654333 4788999999965432 2345899999999 7999999999876554 789
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC-----CCceEEc
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH-----DMVAHVG 685 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~-----~~~~kl~ 685 (725)
+|||||+ |+|.+++..... ..++..++.++.||+.||+|||+. +|+||||||+||+++. ...+||+
T Consensus 95 lv~E~~~-g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~ 165 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKDF-----AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMIS 165 (432)
T ss_dssp EEEECCS-EEHHHHHHSSSC-----CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred EEEECCC-CCHHHHHHhcCC-----CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence 9999996 599999986542 234445678999999999999999 9999999999999953 2368899
Q ss_pred ccccccccccCCCCCCCCCCcccccccCCccccCCCccc
Q 048668 686 DFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKFF 724 (725)
Q Consensus 686 Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 724 (725)
|||+|+........ .......+||++|||||++.
T Consensus 166 DFG~a~~~~~~~~~-----~~~~~~~~gt~~y~APE~l~ 199 (432)
T 3p23_A 166 DFGLCKKLAVGRHS-----FSRRSGVPGTEGWIAPEMLS 199 (432)
T ss_dssp CTTEEECC-----------------CCSCTTSCCGGGTS
T ss_pred cccceeeccCCCcc-----eeeccccCCCcCccChhhhh
Confidence 99999876433111 11122367999999999874
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=7.7e-25 Score=242.67 Aligned_cols=162 Identities=18% Similarity=0.189 Sum_probs=118.7
Q ss_pred CCCcccccccceEEEEEEECCCceEEEEEEeecccc--------chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCc
Q 048668 535 SSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGV 606 (725)
Q Consensus 535 ~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 606 (725)
...+.||+|+||.||+|+. .++.+|+|+...+.. ...+++.+|++++++++||||+++..++....
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~---- 412 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD---- 412 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT----
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC----
Confidence 3457899999999999955 567889998754321 12356899999999999999995555544333
Q ss_pred ceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 607 DFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 607 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
..|+||||++|++|.++++. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|
T Consensus 413 -~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~D 472 (540)
T 3en9_A 413 -NKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIID 472 (540)
T ss_dssp -TTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECC
T ss_pred -ccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEE
Confidence 56999999999999999874 357899999999999999 9999999999999999 999999
Q ss_pred cccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 687 FGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 687 fgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||+|+.......... .........+||++|||||++
T Consensus 473 FGla~~~~~~~~~~~-~~~~~~~~~~GT~~y~APEv~ 508 (540)
T 3en9_A 473 FGLGKISNLDEDKAV-DLIVFKKAVLSTHHEKFDEIW 508 (540)
T ss_dssp CTTCEECCCHHHHHH-HHHHHHHHHHHHCGGGHHHHH
T ss_pred CccCEECCCcccccc-chhhhhhhhcCCCCcCCHHHH
Confidence 999987643210000 000011246799999999986
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=7.6e-24 Score=212.12 Aligned_cols=181 Identities=22% Similarity=0.281 Sum_probs=166.7
Q ss_pred ccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeec
Q 048668 13 FKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYL 92 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 92 (725)
.+.++++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46789999999998 7787666 68999999999999999999999999999999999999989999999999999999
Q ss_pred cCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCc
Q 048668 93 TSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGI 172 (725)
Q Consensus 93 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~ 172 (725)
++|+|+ .+|...|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++++..|..+++|++|+|++|.++.
T Consensus 91 ~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 91 ANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCccc-ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 999998 8888888999999999999999999988889999999999999999999999899999999999999999987
Q ss_pred cCCCCcccccccCCCCCCCEEECccCccccc
Q 048668 173 GAANDLGFVTFLTNCSSLKVLSLSDNQFGGE 203 (725)
Q Consensus 173 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 203 (725)
+++ ..+.++++|++|+|++|.+.+.
T Consensus 170 ~~~------~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 170 VPH------GAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCT------TTTTTCTTCCEEECCSCCBCTT
T ss_pred cCH------HHHhCCCCCCEEEeeCCceeCC
Confidence 665 4577889999999999999854
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1e-25 Score=238.78 Aligned_cols=273 Identities=18% Similarity=0.257 Sum_probs=185.1
Q ss_pred EEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCc----ccccccC-CCceeeccCCCCCCCCChhhhcCC-----C
Q 048668 41 VIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFP----RSICNIS-SLEYFYLTSNRFSGSLPFDIVVNL-----P 110 (725)
Q Consensus 41 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l-----~ 110 (725)
.+++++|++++.+|..+...++|++|+|++|.|++..+ .+|.+++ +|++|+|++|+|+ ......+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLG-FKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGG-GSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCC-HHHHHHHHHHHhccCC
Confidence 46788888888888877777779999999998887776 7788888 8889999998887 4443334443 7
Q ss_pred CccEEEccCceeeeeCCCcccc----c-CccceecCCCccccccCccCcccc-----cccCeeecCCccCCccCCCCccc
Q 048668 111 NLKELGIGANNFFGLIPDSLSN----A-SNLELLDLSNNQFKGKVSIDFSSL-----KILWRLNLEQNNLGIGAANDLGF 180 (725)
Q Consensus 111 ~L~~L~L~~N~i~~~~~~~~~~----l-~~L~~L~Ls~N~i~~~~~~~f~~l-----~~L~~L~L~~N~l~~~~~~~~~~ 180 (725)
+|++|+|++|.++...+..+.. + ++|++|+|++|+|++.....+... ++|++|+|++|.++...... +
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~--l 158 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE--L 158 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH--H
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH--H
Confidence 8888888888887665554433 3 788888888888887766554432 46777777777665433211 1
Q ss_pred ccccCCCC-CCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccc-cCCceEEecccccCCC----CC
Q 048668 181 VTFLTNCS-SLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNL-VNLIALAVEVNQLHGT----IP 254 (725)
Q Consensus 181 ~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~----~~ 254 (725)
...+..++ +|++|+|++|++++..+..+... +..+ ++|++|+|++|.+++. ++
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~---------------------l~~~~~~L~~L~Ls~N~i~~~~~~~l~ 217 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKF---------------------LASIPASVTSLDLSANLLGLKSYAELA 217 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH---------------------HHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHH---------------------HHhCCCCCCEEECCCCCCChhHHHHHH
Confidence 12233343 66666666666664444333322 2334 4899999999999864 34
Q ss_pred hhhcC-CCCccEEeccCcccccCCC----CCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceeccc
Q 048668 255 DVIGE-LKNLQLLGLYKNFLQGSIP----SGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLS 329 (725)
Q Consensus 255 ~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~ 329 (725)
..+.. .++|++|+|++|.+.+..+ ..+..+++|++|++++|.+.+... .....++..+.....+ ++|+++
T Consensus 218 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~----~~~~~l~~~~~~l~~L-~~LdL~ 292 (362)
T 3goz_A 218 YIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSK----EQCKALGAAFPNIQKI-ILVDKN 292 (362)
T ss_dssp HHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCH----HHHHHHHTTSTTCCEE-EEECTT
T ss_pred HHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCH----HHHHHHHHHhccCCce-EEEecC
Confidence 45555 4599999999999986544 446778999999999998552110 1112344455555555 889999
Q ss_pred CCccCCCcchhhh
Q 048668 330 NNLLNGSLPQQVG 342 (725)
Q Consensus 330 ~n~l~~~~~~~~~ 342 (725)
+|.+....+..+.
T Consensus 293 ~N~l~~~~~~~~~ 305 (362)
T 3goz_A 293 GKEIHPSHSIPIS 305 (362)
T ss_dssp SCBCCGGGCHHHH
T ss_pred CCcCCCcchHHHH
Confidence 9999876555443
No 335
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=3.9e-24 Score=225.37 Aligned_cols=250 Identities=16% Similarity=0.132 Sum_probs=141.4
Q ss_pred CccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccccc-Cccccccc
Q 048668 6 PKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGM-FPRSICNI 84 (725)
Q Consensus 6 p~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l 84 (725)
|+.++.+.. ++++.++++++ .+|..+. +++++|+|++|+|+.+.+++|.++++|++|+|++|++.+. .+.+|.++
T Consensus 3 p~~~C~C~~-~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L 78 (350)
T 4ay9_X 3 HHRICHCSN-RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNL 78 (350)
T ss_dssp CCSSSEEET-TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSC
T ss_pred CCCccEeeC-CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcc
Confidence 333444432 55666666666 5555442 4566666666666655555666666666666666665432 33455666
Q ss_pred CCCce-eeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCC-ccccccCccCcccccccCe
Q 048668 85 SSLEY-FYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSN-NQFKGKVSIDFSSLKILWR 162 (725)
Q Consensus 85 ~~L~~-L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~f~~l~~L~~ 162 (725)
++|++ +.+++|+|+ .++.++|.++++|++|++++|+|+.+.+..+....++..|++++ |+|..++...|..+.
T Consensus 79 ~~l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~---- 153 (350)
T 4ay9_X 79 PKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS---- 153 (350)
T ss_dssp TTCCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB----
T ss_pred hhhhhhhcccCCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc----
Confidence 55443 444455665 55555555566666666666666555555555555555555533 345555544444432
Q ss_pred eecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecC-ccceeccCcccccccCCce
Q 048668 163 LNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGG-NQISGTIPLGIRNLVNLIA 241 (725)
Q Consensus 163 L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~-n~i~~~~~~~~~~l~~L~~ 241 (725)
..+++|+|++|+|+ .+|...+... .+..+++.+ |.+....+..|.++++|++
T Consensus 154 -------------------------~~l~~L~L~~N~i~-~i~~~~f~~~-~L~~l~l~~~n~l~~i~~~~f~~l~~L~~ 206 (350)
T 4ay9_X 154 -------------------------FESVILWLNKNGIQ-EIHNSAFNGT-QLDELNLSDNNNLEELPNDVFHGASGPVI 206 (350)
T ss_dssp -------------------------SSCEEEECCSSCCC-EECTTSSTTE-EEEEEECTTCTTCCCCCTTTTTTEECCSE
T ss_pred -------------------------hhhhhhcccccccc-CCChhhcccc-chhHHhhccCCcccCCCHHHhccCcccch
Confidence 23455555555555 2333333333 455555543 4444333456788888888
Q ss_pred EEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCC
Q 048668 242 LAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSN 295 (725)
Q Consensus 242 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 295 (725)
|+|++|+|+.+++..|.++++|+.+++ +.++ .+| .+..+++|+.+++.++
T Consensus 207 LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 207 LDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp EECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred hhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 888888888776666655554444433 2333 455 3677888888888754
No 336
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.91 E-value=3.8e-24 Score=218.46 Aligned_cols=144 Identities=13% Similarity=0.116 Sum_probs=127.2
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc---chHHHHHHHHHHHHcCCCCcccceeeEeecCCCCCcce
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
++|++.+.||+|+||.||+|++..+++.||||++..... ...+++.+|++++++++||||+++++++...+ .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA-----G 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----E
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC-----c
Confidence 579999999999999999999998999999999975532 23478999999999999999999999977654 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.|+||||++|++|.++++.. ....++.+|+.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred EEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc
Confidence 89999999999999999542 24456788999999999999999 99999999999999999999999887
Q ss_pred ccc
Q 048668 689 LAK 691 (725)
Q Consensus 689 la~ 691 (725)
...
T Consensus 175 ~~~ 177 (286)
T 3uqc_A 175 TMP 177 (286)
T ss_dssp CCT
T ss_pred ccC
Confidence 643
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.8e-23 Score=209.49 Aligned_cols=168 Identities=23% Similarity=0.298 Sum_probs=158.7
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
.+||..+.. ++++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|+++.+..|.
T Consensus 27 ~~~p~~~~~--~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 104 (251)
T 3m19_A 27 DSVPSGIPA--DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFD 104 (251)
T ss_dssp SSCCSCCCT--TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT
T ss_pred cccCCCCCC--CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhc
Confidence 367887774 899999999999988888999999999999999999999999999999999999999999988889999
Q ss_pred ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCe
Q 048668 83 NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWR 162 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~ 162 (725)
.+++|++|+|++|+|+ .+|...|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++++..|..+++|++
T Consensus 105 ~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 183 (251)
T 3m19_A 105 HLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQT 183 (251)
T ss_dssp TCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 9999999999999998 888888899999999999999999998889999999999999999999999999999999999
Q ss_pred eecCCccCCcc
Q 048668 163 LNLEQNNLGIG 173 (725)
Q Consensus 163 L~L~~N~l~~~ 173 (725)
|++++|.+...
T Consensus 184 L~l~~N~~~c~ 194 (251)
T 3m19_A 184 ITLFGNQFDCS 194 (251)
T ss_dssp EECCSCCBCTT
T ss_pred EEeeCCceeCC
Confidence 99999999754
No 338
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.90 E-value=9.6e-24 Score=217.48 Aligned_cols=151 Identities=22% Similarity=0.372 Sum_probs=129.0
Q ss_pred hcCCCCC-cccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHH-HcCCCCcccceeeEeecCCCCCcce
Q 048668 531 TSEFSSS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEAL-RNIRHRNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 531 ~~~~~~~-~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~~ 608 (725)
.++|... +.||+|+||.||+|++..+++.||+|+++.. ..+.+|++++ +..+||||+++++++... ......
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCce
Confidence 4567766 7899999999999999999999999999632 4567889888 556899999999987642 122347
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecC---CCceEEc
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVG 685 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~---~~~~kl~ 685 (725)
.|+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred EEEEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 8999999999999999987542 2589999999999999999999999 9999999999999998 7899999
Q ss_pred ccccccccc
Q 048668 686 DFGLAKFLS 694 (725)
Q Consensus 686 Dfgla~~~~ 694 (725)
|||+|+...
T Consensus 163 Dfg~a~~~~ 171 (299)
T 3m2w_A 163 DFGFAKETT 171 (299)
T ss_dssp CCTTCEECT
T ss_pred ccccccccc
Confidence 999997654
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.5e-24 Score=220.34 Aligned_cols=232 Identities=17% Similarity=0.170 Sum_probs=172.8
Q ss_pred CCCcEEEccCCcCCccCCC---CCCCCCCCCEEEccCCcccccCcccc--cccCCCceeeccCCCCCCCCC---hhhhcC
Q 048668 37 SALQVIHIKGNSLGGKFPT---TLGLLRNLVQLNVAENKFYGMFPRSI--CNISSLEYFYLTSNRFSGSLP---FDIVVN 108 (725)
Q Consensus 37 ~~L~~L~l~~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~---~~~~~~ 108 (725)
..++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ...+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578888888887532111 12235679999999999998888888 899999999999999986544 233457
Q ss_pred CCCccEEEccCceeeeeCCCcccccCccceecCCCccccc---cC-ccCcccccccCeeecCCccCCccCCCCccccccc
Q 048668 109 LPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKG---KV-SIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFL 184 (725)
Q Consensus 109 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~---~~-~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 184 (725)
+++|++|+|++|+++++.+..|+.+++|++|||++|++.+ +. ...+..+++|++|+|++|.++.++.. ....+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~---~~~l~ 220 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV---CAALA 220 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHH---HHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHH---HHHHH
Confidence 8999999999999999988999999999999999999865 32 23347889999999999999754321 01134
Q ss_pred CCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCcc
Q 048668 185 TNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQ 264 (725)
Q Consensus 185 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 264 (725)
.++++|++|+|++|++++..|..+..+. .+++|++|+|++|+|+.+ |..+. ++|+
T Consensus 221 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~----------------------~~~~L~~L~Ls~N~l~~l-p~~~~--~~L~ 275 (310)
T 4glp_A 221 AAGVQPHSLDLSHNSLRATVNPSAPRCM----------------------WSSALNSLNLSFAGLEQV-PKGLP--AKLR 275 (310)
T ss_dssp HHTCCCSSEECTTSCCCCCCCSCCSSCC----------------------CCTTCCCEECCSSCCCSC-CSCCC--SCCS
T ss_pred hcCCCCCEEECCCCCCCccchhhHHhcc----------------------CcCcCCEEECCCCCCCch-hhhhc--CCCC
Confidence 6789999999999999865555443321 235777788888888743 44443 6788
Q ss_pred EEeccCcccccCCCCCCcCCCCCCEEeCCCCcCC
Q 048668 265 LLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQ 298 (725)
Q Consensus 265 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 298 (725)
+|+|++|+|++. |. +..+++|+.|++++|+|+
T Consensus 276 ~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 276 VLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred EEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 888888888754 33 567788888888888776
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=8.1e-24 Score=218.52 Aligned_cols=214 Identities=21% Similarity=0.335 Sum_probs=153.9
Q ss_pred cccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 12 LFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 12 l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
+.++..+.+..+.++... .+..+++|++|++++|+++. .| .+..+++|++|+|++|++++..+ +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEE
Confidence 334555666777666432 34567788888898888874 34 57888888888888888886554 88888888888
Q ss_pred ccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 92 LTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 92 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
|++|+++ .++ .+..+++|++|+|++|+++++. .+..+++|++|+|++|+++++.+ +..+++|++|++++|.++
T Consensus 92 L~~n~l~-~~~--~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 92 LSGNPLK-NVS--AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp CCSCCCS-CCG--GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ccCCcCC-Cch--hhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCC
Confidence 8888887 554 3677888888888888888653 37888888888888888887655 777778888888888776
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCC
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHG 251 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 251 (725)
.+++ +.++++|++|++++|++++..+ +..+++|++|+|++|++.+
T Consensus 165 ~~~~--------l~~l~~L~~L~l~~n~l~~~~~---------------------------l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 165 DLTP--------LANLSKLTTLKADDNKISDISP---------------------------LASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp CCGG--------GTTCTTCCEEECCSSCCCCCGG---------------------------GGGCTTCCEEECTTSCCCB
T ss_pred CChh--------hcCCCCCCEEECCCCccCcChh---------------------------hcCCCCCCEEEccCCccCc
Confidence 5332 5667777777777777763211 4455667777777777765
Q ss_pred CCChhhcCCCCccEEeccCccccc
Q 048668 252 TIPDVIGELKNLQLLGLYKNFLQG 275 (725)
Q Consensus 252 ~~~~~~~~l~~L~~L~L~~N~l~~ 275 (725)
..+ +..+++|++|++++|.+++
T Consensus 210 ~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 210 VSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GTTCTTCCEEEEEEEEEEC
T ss_pred ccc--ccCCCCCCEEEccCCeeec
Confidence 542 6667777777777777663
No 341
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.90 E-value=2.4e-24 Score=232.05 Aligned_cols=176 Identities=18% Similarity=0.205 Sum_probs=128.8
Q ss_pred cCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc---chHHHHHHHHHHHHcCCC-Cccccee---------eEe
Q 048668 532 SEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFRSFVAECEALRNIRH-RNLIKII---------TIC 598 (725)
Q Consensus 532 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~---------~~~ 598 (725)
..|...+.||+|+||+||+|++..+|+.||||++..... ...+.+.+|+.+++.++| ++..... ..+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 356777899999999999999999999999999874322 235789999999999987 2221111 111
Q ss_pred e------------cCCCCCcceeeEEEeccCCCCHHHHhcccCC-ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 048668 599 S------------STDFKGVDFKALVFEYMGNGSLEDWLHQSND-QVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMV 665 (725)
Q Consensus 599 ~------------~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv 665 (725)
. ..........+++|+++ +++|.++++.... ......+++..++.++.|++.||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1 00000012356777766 6899999852210 00112577889999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCceEEcccccccccccCCCCCCCCCCcccccccCCccccCCCcc
Q 048668 666 HGDLKPSNVLLDHDMVAHVGDFGLAKFLSSHHLDTSSKTPSSSIGIKGTVGYVAPGKF 723 (725)
Q Consensus 666 Hrdlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 723 (725)
||||||+|||++.++.+||+|||+|+..... ....+| +.|||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~ 279 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETT 279 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----------cccCCC-CceeCchhh
Confidence 9999999999999999999999999865332 123568 999999986
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=2e-23 Score=215.63 Aligned_cols=195 Identities=22% Similarity=0.305 Sum_probs=167.5
Q ss_pred ccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCc
Q 048668 9 IGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLE 88 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 88 (725)
+..+++|++|++++|.++ .++ .+..+++|++|++++|++++..+ |..+++|++|+|++|++++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 345889999999999998 455 68999999999999999986655 99999999999999999854 3699999999
Q ss_pred eeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCc
Q 048668 89 YFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168 (725)
Q Consensus 89 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N 168 (725)
+|+|++|+++ .++. +..+++|++|+|++|+++++.+ +..+++|++|+|++|+++++.+ +..+++|+.|++++|
T Consensus 111 ~L~l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 111 TLDLTSTQIT-DVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDN 183 (308)
T ss_dssp EEECTTSCCC-CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEECCCCCCC-Cchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCC
Confidence 9999999998 6664 7899999999999999997755 8999999999999999998766 899999999999999
Q ss_pred cCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccc
Q 048668 169 NLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQ 248 (725)
Q Consensus 169 ~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 248 (725)
.++.+++ +..+++|++|+|++|++++.. .+..+++|+.|++++|.
T Consensus 184 ~l~~~~~--------l~~l~~L~~L~L~~N~l~~~~---------------------------~l~~l~~L~~L~l~~N~ 228 (308)
T 1h6u_A 184 KISDISP--------LASLPNLIEVHLKNNQISDVS---------------------------PLANTSNLFIVTLTNQT 228 (308)
T ss_dssp CCCCCGG--------GGGCTTCCEEECTTSCCCBCG---------------------------GGTTCTTCCEEEEEEEE
T ss_pred ccCcChh--------hcCCCCCCEEEccCCccCccc---------------------------cccCCCCCCEEEccCCe
Confidence 9986543 678899999999999998422 14456677777777777
Q ss_pred cCC
Q 048668 249 LHG 251 (725)
Q Consensus 249 l~~ 251 (725)
+++
T Consensus 229 i~~ 231 (308)
T 1h6u_A 229 ITN 231 (308)
T ss_dssp EEC
T ss_pred eec
Confidence 764
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=1.4e-23 Score=221.12 Aligned_cols=231 Identities=20% Similarity=0.195 Sum_probs=181.8
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCc-cCCCCCCCCCCCCE-EEccCCcccccCccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGG-KFPTTLGLLRNLVQ-LNVAENKFYGMFPRS 80 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~-L~Ls~N~l~~~~~~~ 80 (725)
.+||+.+. +++++|+|++|+|+...+.+|.++++|++|+|++|++.+ +.+++|.++++|++ +.++.|+|+.+.|.+
T Consensus 22 t~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 22 TEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp CSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred CccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 37898885 489999999999996555789999999999999999865 45678999999876 667789999999999
Q ss_pred ccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccC-ceeeeeCCCcccccC-ccceecCCCccccccCccCccccc
Q 048668 81 ICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA-NNFFGLIPDSLSNAS-NLELLDLSNNQFKGKVSIDFSSLK 158 (725)
Q Consensus 81 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~-~L~~L~Ls~N~i~~~~~~~f~~l~ 158 (725)
|.++++|++|++++|+|+ .+|...+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+.+++..|.. .
T Consensus 100 f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~-~ 177 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNG-T 177 (350)
T ss_dssp BCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTT-E
T ss_pred hhhccccccccccccccc-cCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccc-c
Confidence 999999999999999998 78877777888899999965 789888888888876 6899999999999998888764 5
Q ss_pred ccCeeecC-CccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCccccccc
Q 048668 159 ILWRLNLE-QNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLV 237 (725)
Q Consensus 159 ~L~~L~L~-~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~ 237 (725)
+|++|+++ +|.++.++. ++|.++++|++|||++|+|+. +|. ..+ .
T Consensus 178 ~L~~l~l~~~n~l~~i~~------~~f~~l~~L~~LdLs~N~l~~-lp~------------------------~~~---~ 223 (350)
T 4ay9_X 178 QLDELNLSDNNNLEELPN------DVFHGASGPVILDISRTRIHS-LPS------------------------YGL---E 223 (350)
T ss_dssp EEEEEECTTCTTCCCCCT------TTTTTEECCSEEECTTSCCCC-CCS------------------------SSC---T
T ss_pred chhHHhhccCCcccCCCH------HHhccCcccchhhcCCCCcCc-cCh------------------------hhh---c
Confidence 78899997 477877765 457788999999999999883 222 122 2
Q ss_pred CCceEEecccccCCCCChhhcCCCCccEEeccCcc
Q 048668 238 NLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNF 272 (725)
Q Consensus 238 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 272 (725)
+|+.|.+.++.--...| .+..+++|+.+++.++.
T Consensus 224 ~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 224 NLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred cchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 33333333322222334 36777788888887654
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3.1e-23 Score=214.73 Aligned_cols=226 Identities=18% Similarity=0.193 Sum_probs=170.9
Q ss_pred CCCCEEECccCcccccCChh---hhhccccceeEEecCccceeccCccc--ccccCCceEEecccccCCCCC----hhhc
Q 048668 188 SSLKVLSLSDNQFGGELPHS---IANLSSTMIVFLIGGNQISGTIPLGI--RNLVNLIALAVEVNQLHGTIP----DVIG 258 (725)
Q Consensus 188 ~~L~~L~L~~N~l~~~~p~~---~~~l~~~l~~L~l~~n~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~ 258 (725)
..++.+.+.++.++...-.. +...+ .++.|++++|.+.+..|..+ ..+++|++|+|++|.+.+..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYS-RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHS-CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccC-ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34666666666654221111 11222 57888888888887888877 889999999999999987655 4456
Q ss_pred CCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccc--cccccccceecccCCccCCC
Q 048668 259 ELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQL--LSITTLSLYLDLSNNLLNGS 336 (725)
Q Consensus 259 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~--~~~~~ll~~L~L~~n~l~~~ 336 (725)
.+++|++|+|++|.+.+..+..|..+++|++|+|++|++.+.. .++... ..+..+ ++|++++|+++.
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~---------~~~~~~~~~~l~~L-~~L~Ls~N~l~~- 211 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGER---------GLMAALCPHKFPAI-QNLALRNTGMET- 211 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHH---------HHHTTSCTTSSCCC-CSCBCCSSCCCC-
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccch---------hhhHHHhhhcCCCC-CEEECCCCCCCc-
Confidence 7889999999999999888889999999999999999765210 122121 233444 889999999873
Q ss_pred cch----hhhcCCCCCeEEccCccccccCccccccc---cCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccC
Q 048668 337 LPQ----QVGNLKNLIILDISSNQFSGMIPVTLSTC---VSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQF 409 (725)
Q Consensus 337 ~~~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 409 (725)
++. .+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|||++|+|++.
T Consensus 212 l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~- 287 (310)
T 4glp_A 212 PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA- 287 (310)
T ss_dssp HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-
T ss_pred hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-
Confidence 333 35788999999999999998878777776 69999999999999 5666664 7899999999999865
Q ss_pred cccccCCCCCCeEEcccccCe
Q 048668 410 PKFLENLSFLEFLNLSYNHLE 430 (725)
Q Consensus 410 p~~~~~l~~L~~L~l~~N~l~ 430 (725)
|. +..+++|+.|+|++|+|+
T Consensus 288 ~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 288 PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CC-TTSCCCCSCEECSSTTTS
T ss_pred ch-hhhCCCccEEECcCCCCC
Confidence 33 678899999999999986
No 345
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.7e-23 Score=212.46 Aligned_cols=140 Identities=19% Similarity=0.224 Sum_probs=112.3
Q ss_pred HHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc------------------chHHHHHHHHHHHHcCC
Q 048668 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------------------GAFRSFVAECEALRNIR 587 (725)
Q Consensus 526 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 587 (725)
.+......|+..+.||+|+||.||+|++ .+|+.||+|+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3344455667779999999999999999 7899999999964321 12456899999999999
Q ss_pred CCcccceeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEec
Q 048668 588 HRNLIKIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHG 667 (725)
Q Consensus 588 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHr 667 (725)
| +++++++.. +..|+||||++||+|.+ +... ....++.|++.||+|+|+. +|+||
T Consensus 163 ~---~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~~------------~~~~i~~qi~~~l~~lH~~---giiHr 217 (282)
T 1zar_A 163 G---LAVPKVYAW------EGNAVLMELIDAKELYR-VRVE------------NPDEVLDMILEEVAKFYHR---GIVHG 217 (282)
T ss_dssp T---SSSCCEEEE------ETTEEEEECCCCEEGGG-CCCS------------CHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred C---CCcCeEEec------cceEEEEEecCCCcHHH-cchh------------hHHHHHHHHHHHHHHHHHC---CCEeC
Confidence 4 555554422 25699999999999998 4321 1346899999999999999 99999
Q ss_pred CCCCCCeeecCCCceEEcccccccc
Q 048668 668 DLKPSNVLLDHDMVAHVGDFGLAKF 692 (725)
Q Consensus 668 dlkp~Nill~~~~~~kl~Dfgla~~ 692 (725)
||||+||+++ ++.+||+|||+|+.
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeE
Confidence 9999999999 99999999999863
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.4e-25 Score=238.38 Aligned_cols=260 Identities=18% Similarity=0.221 Sum_probs=150.0
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccC----CCCCCCCCCCCEEEccCCc---ccccCcccc------
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKF----PTTLGLLRNLVQLNVAENK---FYGMFPRSI------ 81 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~Ls~N~---l~~~~~~~~------ 81 (725)
|+...++...+. .++..+..+++|++|+|++|+++... +..|..+++|++|+|++|. +++.+|..+
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~ 89 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQA 89 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHH
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHH
Confidence 333334444444 56777888888999999999887653 3447788889999888864 444455444
Q ss_pred -cccCCCceeeccCCCCCCC----CChhhhcCCCCccEEEccCceeeeeCCCccc----cc---------CccceecCCC
Q 048668 82 -CNISSLEYFYLTSNRFSGS----LPFDIVVNLPNLKELGIGANNFFGLIPDSLS----NA---------SNLELLDLSN 143 (725)
Q Consensus 82 -~~l~~L~~L~L~~N~l~~~----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~----~l---------~~L~~L~Ls~ 143 (725)
..+++|++|+|++|.+++. +|. .+..+++|++|+|++|.++...+..+. .+ ++|++|+|++
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~ 168 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR 168 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCC
Confidence 6778888888888888731 332 346677888888888887644333333 33 6777777777
Q ss_pred ccccccCc----cCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEE
Q 048668 144 NQFKGKVS----IDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFL 219 (725)
Q Consensus 144 N~i~~~~~----~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~ 219 (725)
|+|+.... ..|..+++|++|++++|.++...... -.+..+.++++|++|+|++|.++... .
T Consensus 169 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~-l~~~~l~~~~~L~~L~Ls~n~l~~~g---~----------- 233 (386)
T 2ca6_A 169 NRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH-LLLEGLAYCQELKVLDLQDNTFTHLG---S----------- 233 (386)
T ss_dssp SCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHH-HHHTTGGGCTTCCEEECCSSCCHHHH---H-----------
T ss_pred CCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHH-HHHHHhhcCCCccEEECcCCCCCcHH---H-----------
Confidence 77752211 23445566666666666664211000 00013445566666666666654100 0
Q ss_pred ecCccceeccCcccccccCCceEEecccccCCC----CChhhcC--CCCccEEeccCccccc----CCCCCC-cCCCCCC
Q 048668 220 IGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT----IPDVIGE--LKNLQLLGLYKNFLQG----SIPSGL-GNLTKLA 288 (725)
Q Consensus 220 l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~--l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~ 288 (725)
+.+|..+..+++|++|+|++|.+++. ++.++.. +++|++|+|++|.+.+ .+|..+ .++++|+
T Consensus 234 -------~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~ 306 (386)
T 2ca6_A 234 -------SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 306 (386)
T ss_dssp -------HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCC
T ss_pred -------HHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCce
Confidence 12333444555566666666665543 3344422 5566666666666654 244444 3455666
Q ss_pred EEeCCCCcCC
Q 048668 289 KLDLGSNSLQ 298 (725)
Q Consensus 289 ~L~L~~N~l~ 298 (725)
+|++++|+++
T Consensus 307 ~L~l~~N~l~ 316 (386)
T 2ca6_A 307 FLELNGNRFS 316 (386)
T ss_dssp EEECTTSBSC
T ss_pred EEEccCCcCC
Confidence 6666665544
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=8e-23 Score=198.48 Aligned_cols=181 Identities=24% Similarity=0.289 Sum_probs=159.8
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
-+.++++++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|+++++.+..|.++++|++|+|++
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 578899999998 566655 35899999999999988888899999999999999999988888899999999999999
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccC
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGA 174 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~ 174 (725)
|+|+ .+|...|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++++..|..+++|++|++++|.+.
T Consensus 86 n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~--- 161 (208)
T 2o6s_A 86 NQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD--- 161 (208)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC---
T ss_pred CcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee---
Confidence 9998 788888889999999999999999888888999999999999999999998888999999999999999764
Q ss_pred CCCcccccccCCCCCCCEEECccCcccccCChhhhhcc
Q 048668 175 ANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLS 212 (725)
Q Consensus 175 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 212 (725)
..+++|++|+++.|+++|.+|..++.++
T Consensus 162 ----------~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 162 ----------CTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ----------CCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ----------cCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 3567888999999999888888777665
No 348
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=2.1e-24 Score=230.92 Aligned_cols=250 Identities=17% Similarity=0.207 Sum_probs=182.3
Q ss_pred cCCccccCcccCcEEecCCCccCccCC----ccccCCCCCcEEEccCCcC---CccCCCCC-------CCCCCCCEEEcc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLP----DFIGNLSALQVIHIKGNSL---GGKFPTTL-------GLLRNLVQLNVA 69 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~l---~~~~~~~~-------~~l~~L~~L~Ls 69 (725)
.+++.+..+++|++|+|++|.|+...+ ..|..+++|++|+|++|.+ ++..|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 467778889999999999999997644 4477999999999999754 44455444 788999999999
Q ss_pred CCcccc----cCcccccccCCCceeeccCCCCCCCCChhhh----cCC---------CCccEEEccCceee-eeCC---C
Q 048668 70 ENKFYG----MFPRSICNISSLEYFYLTSNRFSGSLPFDIV----VNL---------PNLKELGIGANNFF-GLIP---D 128 (725)
Q Consensus 70 ~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~~l---------~~L~~L~L~~N~i~-~~~~---~ 128 (725)
+|.++. .+|..+..+++|++|+|++|.|+ ......+ ..+ ++|++|+|++|+++ ...+ .
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~-~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG-PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH-HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC-HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 999987 47778999999999999999997 3322222 233 89999999999997 3333 4
Q ss_pred cccccCccceecCCCccccc-----cCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCccccc
Q 048668 129 SLSNASNLELLDLSNNQFKG-----KVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGE 203 (725)
Q Consensus 129 ~~~~l~~L~~L~Ls~N~i~~-----~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 203 (725)
.+..+++|++|+|++|+|+. +.+..+..+++|++|+|++|.++..... .++..+..+++|++|+|++|.+++.
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~--~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSS--ALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHH--HHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHH--HHHHHHccCCCcCEEECCCCCCchh
Confidence 67789999999999999983 3344788999999999999998532111 1235577889999999999999854
Q ss_pred CChhhhhccccceeEEecCccceeccCccc--ccccCCceEEecccccCC----CCChhh-cCCCCccEEeccCcccccC
Q 048668 204 LPHSIANLSSTMIVFLIGGNQISGTIPLGI--RNLVNLIALAVEVNQLHG----TIPDVI-GELKNLQLLGLYKNFLQGS 276 (725)
Q Consensus 204 ~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~L~~N~l~~~ 276 (725)
....+ +..+ +.+++|++|+|++|.+++ .+|..+ ..+++|++|++++|.+.+.
T Consensus 260 ~~~~l---------------------~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 260 GAAAV---------------------VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHH---------------------HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred hHHHH---------------------HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 22211 1222 224556666666666654 244444 4456666666666666543
Q ss_pred C
Q 048668 277 I 277 (725)
Q Consensus 277 ~ 277 (725)
.
T Consensus 319 ~ 319 (386)
T 2ca6_A 319 D 319 (386)
T ss_dssp S
T ss_pred h
Confidence 3
No 349
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=7.9e-24 Score=222.13 Aligned_cols=223 Identities=20% Similarity=0.238 Sum_probs=148.2
Q ss_pred cCcEEecCCCccCccCCccccCC--CCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccccc-CcccccccCCCcee
Q 048668 14 KLQALALAGNYLTGKLPDFIGNL--SALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGM-FPRSICNISSLEYF 90 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L 90 (725)
.+++|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788888888876 4566666 7888888888888866665 45688888888888888755 77778888888888
Q ss_pred eccCCCCCCCCChhhhcCCCCccEEEccCc-eeeee-CCCcccccCccceecCCCc-ccccc-CccCccccc-ccCeeec
Q 048668 91 YLTSNRFSGSLPFDIVVNLPNLKELGIGAN-NFFGL-IPDSLSNASNLELLDLSNN-QFKGK-VSIDFSSLK-ILWRLNL 165 (725)
Q Consensus 91 ~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N-~i~~~-~~~~~~~l~~L~~L~Ls~N-~i~~~-~~~~f~~l~-~L~~L~L 165 (725)
+|++|.+++..+. .+..+++|++|+|++| .++.. .+..+.++++|++|+|++| .+++. .+..+..++ +|++|++
T Consensus 124 ~L~~~~l~~~~~~-~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 124 SLEGLRLSDPIVN-TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp ECTTCBCCHHHHH-HHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred eCcCcccCHHHHH-HHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 8888888744443 4566888888888888 56642 4555777888888888888 77753 244566677 7777777
Q ss_pred CCcc--CCccCCCCcccccccCCCCCCCEEECccCc-ccccCChhhhhccccceeEEecCcc-ceeccCcccccccCCce
Q 048668 166 EQNN--LGIGAANDLGFVTFLTNCSSLKVLSLSDNQ-FGGELPHSIANLSSTMIVFLIGGNQ-ISGTIPLGIRNLVNLIA 241 (725)
Q Consensus 166 ~~N~--l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~~l~~L~l~~n~-i~~~~~~~~~~l~~L~~ 241 (725)
++|. ++.. .++..+.++++|++|++++|. +++..+..+..++ +|+.|++++|. +.......+..+++|+.
T Consensus 203 ~~~~~~~~~~-----~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~-~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 203 SGYRKNLQKS-----DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN-YLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CSCGGGSCHH-----HHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT-TCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCCcccCCHH-----HHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCC-CCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 7773 3311 122345566777777777777 5555555555543 45555555552 22111123444555555
Q ss_pred EEeccc
Q 048668 242 LAVEVN 247 (725)
Q Consensus 242 L~L~~N 247 (725)
|++++|
T Consensus 277 L~l~~~ 282 (336)
T 2ast_B 277 LQVFGI 282 (336)
T ss_dssp EECTTS
T ss_pred EeccCc
Confidence 555544
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.2e-21 Score=190.13 Aligned_cols=153 Identities=23% Similarity=0.282 Sum_probs=126.6
Q ss_pred CcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEcc
Q 048668 39 LQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIG 118 (725)
Q Consensus 39 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~ 118 (725)
-+.++.++++++ .+|..+ .++|++|+|++|+++++.+..|.++++|++|++++|+++ .+|...|.++++|++|+|+
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECC
Confidence 367889999997 445444 358999999999999888888999999999999999998 7888888889999999999
Q ss_pred CceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccC
Q 048668 119 ANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDN 198 (725)
Q Consensus 119 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 198 (725)
+|+++++.+..|..+++|++|+|++|+|+++++..|..+++|++|++++|.++.++. ..+..+++|++|++++|
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~------~~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD------GVFDRLTSLQYIWLHDN 158 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT------TTTTTCTTCCEEECCSC
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH------HHhccCCCccEEEecCC
Confidence 999998888888999999999999999998888778888888888888888875544 33566777777777777
Q ss_pred ccc
Q 048668 199 QFG 201 (725)
Q Consensus 199 ~l~ 201 (725)
.+.
T Consensus 159 ~~~ 161 (208)
T 2o6s_A 159 PWD 161 (208)
T ss_dssp CBC
T ss_pred Cee
Confidence 665
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=3e-23 Score=217.72 Aligned_cols=225 Identities=20% Similarity=0.212 Sum_probs=102.9
Q ss_pred CcEEEccCCcCCccCCCCCCCC--CCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEE
Q 048668 39 LQVIHIKGNSLGGKFPTTLGLL--RNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELG 116 (725)
Q Consensus 39 L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 116 (725)
++.|++++|++. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++......+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 555555555553 2334444 4555555555555544333 334555555555555554220112334455555555
Q ss_pred ccCceeeeeCCCcccccCccceecCCCc-ccccc-CccCcccccccCeeecCCc-cCCccCCCCcccccccCCCC-CCCE
Q 048668 117 IGANNFFGLIPDSLSNASNLELLDLSNN-QFKGK-VSIDFSSLKILWRLNLEQN-NLGIGAANDLGFVTFLTNCS-SLKV 192 (725)
Q Consensus 117 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N-~i~~~-~~~~f~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~~~~l~-~L~~ 192 (725)
|++|.++...+..++.+++|++|+|++| .+++. .+..+..+++|++|++++| .++... ++..+..++ +|++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~-----~~~~~~~l~~~L~~ 199 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKH-----VQVAVAHVSETITQ 199 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHH-----HHHHHHHSCTTCCE
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHH-----HHHHHHhcccCCCE
Confidence 5555554444444445555555555555 34321 1222334444444444444 433210 112233334 4444
Q ss_pred EECccCcccccCChhhhhccccceeEEecCccce-eccCcccccccCCceEEecccc-cCCCCChhhcCCCCccEEeccC
Q 048668 193 LSLSDNQFGGELPHSIANLSSTMIVFLIGGNQIS-GTIPLGIRNLVNLIALAVEVNQ-LHGTIPDVIGELKNLQLLGLYK 270 (725)
Q Consensus 193 L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~ 270 (725)
|++++|.+ .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|++++
T Consensus 200 L~l~~~~~-----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~ 256 (336)
T 2ast_B 200 LNLSGYRK-----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSR 256 (336)
T ss_dssp EECCSCGG-----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred EEeCCCcc-----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCC
Confidence 44444421 111 1233334445566666666665 4444455555566666666666
Q ss_pred cc-cccCCCCCCcCCCCCCEEeCCCC
Q 048668 271 NF-LQGSIPSGLGNLTKLAKLDLGSN 295 (725)
Q Consensus 271 N~-l~~~~~~~~~~l~~L~~L~L~~N 295 (725)
|. +.......+..+++|++|++++|
T Consensus 257 ~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 257 CYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 63 21111113455556666666555
No 352
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=1.6e-21 Score=190.73 Aligned_cols=153 Identities=23% Similarity=0.340 Sum_probs=135.3
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
-+.++++++.++ .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++.|.+|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 478999999998 6777665 6899999999999988888999999999999999999988899999999999999999
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
|+|+ .+|..+|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++++..|..+++|++|+|++|.+.
T Consensus 90 N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 90 NKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 9998 889888889999999999999999998889999999999999999999888877777777777777776654
No 353
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=1.5e-21 Score=206.34 Aligned_cols=156 Identities=21% Similarity=0.203 Sum_probs=122.2
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCC-CCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLG-LLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
-+++++++|+++ .+|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|+|+++.+.+|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 367888888888 5776554 4588888888888888888887 88888888888888888888888888888888888
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCc---ccccccCeeecCCccC
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDF---SSLKILWRLNLEQNNL 170 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f---~~l~~L~~L~L~~N~l 170 (725)
+|+|+ .++...|.++++|++|+|++|+|+.+.+..|..+++|++|+|++|+|++++...| ..+++|+.|+|++|.|
T Consensus 97 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 97 SNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCcCC-cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 88887 7777778888888888888888888888888888888888888888887777666 3455555555555555
Q ss_pred CccC
Q 048668 171 GIGA 174 (725)
Q Consensus 171 ~~~~ 174 (725)
+.++
T Consensus 176 ~~l~ 179 (361)
T 2xot_A 176 KKLP 179 (361)
T ss_dssp CCCC
T ss_pred CccC
Confidence 5433
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=4e-21 Score=212.70 Aligned_cols=194 Identities=23% Similarity=0.292 Sum_probs=97.9
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55666666666653 444332 45666666666665 333 234556666666666654 333 433 56666666
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCcc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIG 173 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~ 173 (725)
+|+|+ .+|. .+++|+.|+|++|+|+++ |. .+++|++|+|++|+|++++. |. ++|++|+|++|.|+.+
T Consensus 129 ~N~l~-~lp~----~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~~l 195 (571)
T 3cvr_A 129 NNQLT-MLPE----LPALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLESL 195 (571)
T ss_dssp SSCCS-CCCC----CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCSSC
T ss_pred CCcCC-CCCC----cCccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCCch
Confidence 66665 3554 355566666666665543 22 34555566666665555443 33 5555555555555533
Q ss_pred CCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCC
Q 048668 174 AANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTI 253 (725)
Q Consensus 174 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 253 (725)
+. +.- ......+.|++|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+
T Consensus 196 p~--~~~-~L~~~~~~L~~L~Ls~N~l~--------------------------~lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 196 PA--VPV-RNHHSEETEIFFRCRENRIT--------------------------HIPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp CC--CC---------CCEEEECCSSCCC--------------------------CCCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred hh--HHH-hhhcccccceEEecCCCcce--------------------------ecCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 22 100 00001111255555555544 34555555566666666666666555
Q ss_pred ChhhcCC
Q 048668 254 PDVIGEL 260 (725)
Q Consensus 254 ~~~~~~l 260 (725)
|..+..+
T Consensus 247 p~~l~~l 253 (571)
T 3cvr_A 247 RESLSQQ 253 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555543
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=7.7e-21 Score=185.77 Aligned_cols=153 Identities=24% Similarity=0.270 Sum_probs=124.1
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCC-CCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFP-TTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
-+++++++|.++ .+|..+. ..+++|+|++|+|++..| +.|..+++|++|+|++|+|+++.+.+|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 468999999988 5777664 457899999999987754 568888999999999999988888889999999999999
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
+|+|+ .++...|.++++|++|+|++|+|+++.|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|.+.
T Consensus 90 ~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 90 SNRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SSCCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 99997 777777888888888888888888888888888888888888888888877777766666666666666553
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=5.2e-21 Score=195.61 Aligned_cols=169 Identities=27% Similarity=0.342 Sum_probs=78.2
Q ss_pred cccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 12 LFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 12 l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
+++|++|++++|.++. ++ .+..+++|++|++++|++++..+ +..+++|++|+|++|++++. ..+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEE
T ss_pred cCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEE
Confidence 4445555555555442 22 24444555555555555543332 44455555555555554431 1244455555555
Q ss_pred ccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 92 LTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 92 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
|++|+|+ .++ .+..+++|+.|+|++|+++++ ..+..+++|++|+|++|+|+++.+ +..+++|++|++++|.++
T Consensus 119 L~~n~i~-~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 119 LEHNGIS-DIN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CTTSCCC-CCG--GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCcCC-CCh--hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555554 232 233445555555555555443 334444555555555555544433 444445555555555444
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCccc
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFG 201 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 201 (725)
.++ .+..+++|+.|++++|.++
T Consensus 192 ~l~--------~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 192 DLR--------ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp BCG--------GGTTCTTCSEEEEEEEEEE
T ss_pred CCh--------hhccCCCCCEEECcCCccc
Confidence 321 1344444555555544444
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=4e-21 Score=203.12 Aligned_cols=165 Identities=21% Similarity=0.253 Sum_probs=147.9
Q ss_pred cCCccccCcccCcEEecCCCccCccCCcccc-CCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIG-NLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
+||..+.. .++.|+|++|+|++..+..|. .+++|++|+|++|+|+++.+.+|..+++|++|+|++|+|+.+.+..|.
T Consensus 32 ~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 109 (361)
T 2xot_A 32 NVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS 109 (361)
T ss_dssp SCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhC
Confidence 58888776 799999999999987778888 999999999999999999999999999999999999999988889999
Q ss_pred ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcc---cccCccceecCCCccccccCccCcccccc
Q 048668 83 NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSL---SNASNLELLDLSNNQFKGKVSIDFSSLKI 159 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~---~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~ 159 (725)
++++|++|+|++|+|+ .++...|.++++|+.|+|++|+|+.+.+..| ..+++|++|||++|+|+.++...|..++.
T Consensus 110 ~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 188 (361)
T 2xot_A 110 DLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPA 188 (361)
T ss_dssp TCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCH
T ss_pred CCcCCCEEECCCCccc-EECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccH
Confidence 9999999999999998 7877888999999999999999998877777 67999999999999999998888888776
Q ss_pred --cCeeecCCccCC
Q 048668 160 --LWRLNLEQNNLG 171 (725)
Q Consensus 160 --L~~L~L~~N~l~ 171 (725)
++.|+|++|.+.
T Consensus 189 ~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 189 WVKNGLYLHNNPLE 202 (361)
T ss_dssp HHHTTEECCSSCEE
T ss_pred hhcceEEecCCCcc
Confidence 367777777664
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=3.6e-21 Score=196.83 Aligned_cols=169 Identities=24% Similarity=0.323 Sum_probs=120.3
Q ss_pred cccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 12 LFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 12 l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
+.++..+.+..+.++... .+..+++|++|++++|+++.. + .+..+++|++|+|++|++++..+ +.++++|++|+
T Consensus 23 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 344556677777776432 345678888889998888744 3 47888888888888888886555 88888888888
Q ss_pred ccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 92 LTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 92 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
|++|+++ .+|. +..+++|++|+|++|+++++ ..+..+++|++|+|++|+|+++ ..|..+++|++|++++|.++
T Consensus 97 l~~n~l~-~~~~--l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 97 LDENKVK-DLSS--LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp CCSSCCC-CGGG--GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred CCCCcCC-CChh--hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 8888887 5553 56788888888888888765 4577788888888888888766 45666666666666666665
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCccc
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFG 201 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 201 (725)
.+.+ +..+++|++|++++|.++
T Consensus 170 ~~~~--------l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 170 DIVP--------LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CCGG--------GTTCTTCCEEECCSSCCC
T ss_pred cchh--------hcCCCccCEEECCCCcCC
Confidence 4321 445566666666666555
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=6.5e-21 Score=186.29 Aligned_cols=158 Identities=18% Similarity=0.148 Sum_probs=122.4
Q ss_pred ceEEecccccCCCCChhhcCCCCccEEeccCcccccCCC-CCCcCCCCCCEEeCCCCcCCCccccccccccccccccccc
Q 048668 240 IALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIP-SGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLS 318 (725)
Q Consensus 240 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~ 318 (725)
+.+++++|.++.+ |..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|
T Consensus 14 ~~l~~s~n~l~~i-P~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N----------------------- 67 (220)
T 2v70_A 14 TTVDCSNQKLNKI-PEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNN----------------------- 67 (220)
T ss_dssp TEEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSS-----------------------
T ss_pred CEeEeCCCCcccC-ccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCC-----------------------
Confidence 3566666666543 33221 234566666666654433 23455555555555555
Q ss_pred cccccceecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEE
Q 048668 319 ITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFL 398 (725)
Q Consensus 319 ~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 398 (725)
.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|+.|
T Consensus 68 -------------~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 68 -------------KITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp -------------CCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred -------------cCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 4444556678889999999999999998888889999999999999999999989999999999999
Q ss_pred eCCCCcccccCcccccCCCCCCeEEcccccCeeecCCC
Q 048668 399 DVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTK 436 (725)
Q Consensus 399 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 436 (725)
+|++|+|++..|..|..+++|+.|+|++|+|+|.++..
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~ 172 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLA 172 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGH
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchH
Confidence 99999999988999999999999999999999988753
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1.8e-20 Score=183.12 Aligned_cols=142 Identities=21% Similarity=0.288 Sum_probs=133.4
Q ss_pred cCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccc
Q 048668 4 QIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICN 83 (725)
Q Consensus 4 ~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 83 (725)
+||..+. +++++|+|++|+|++..+..|..+++|++|+|++|+|+++.|.+|.++++|++|+|++|+|+.+.+..|.+
T Consensus 25 ~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~ 102 (220)
T 2v9t_B 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEG 102 (220)
T ss_dssp SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTT
T ss_pred cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccC
Confidence 6788777 48999999999999777789999999999999999999999999999999999999999999888888999
Q ss_pred cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccc
Q 048668 84 ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKG 148 (725)
Q Consensus 84 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~ 148 (725)
+++|++|+|++|+|+ .++...|.++++|++|+|++|+|+++.+..|..+++|++|+|++|++..
T Consensus 103 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 103 LFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCEEECCCCCCC-EeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999999999999998 7777788999999999999999999999999999999999999999974
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=4e-20 Score=181.95 Aligned_cols=152 Identities=22% Similarity=0.246 Sum_probs=103.3
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
.+.++++++.++ .+|..+. ++|++|+|++|+++++.|..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 556777777776 5665444 6777777777777777677777777777777777777666666677777777777777
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
|+|+ .++...|..+++|++|+|++|+|+. +|..+..+++|++|+|++|+|+++++..|..+++|+.|++++|.+.
T Consensus 98 N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 98 NQLT-VLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCS-CCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CcCC-ccChhHhCcchhhCeEeccCCcccc-cCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 7776 6666666677777777777777763 3556667777777777777777666655555555555555555443
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=3.1e-20 Score=205.57 Aligned_cols=196 Identities=26% Similarity=0.309 Sum_probs=132.7
Q ss_pred CCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEc
Q 048668 38 ALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGI 117 (725)
Q Consensus 38 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 117 (725)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|+ .+|. +.+ +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~-~ip~--l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLS-TLPE--LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-CCCC--CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCC-Ccch--hhc--CCCEEEC
Confidence 77888888888875 454442 67888888888877 444 44677888888888877 4766 333 7777777
Q ss_pred cCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECcc
Q 048668 118 GANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSD 197 (725)
Q Consensus 118 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~ 197 (725)
++|+|+++ |. .+++|++|+|++|+|++++. .+++|++|+|++|.++.++. +. ++|++|+|++
T Consensus 128 s~N~l~~l-p~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~lp~--------l~--~~L~~L~Ls~ 189 (571)
T 3cvr_A 128 DNNQLTML-PE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTFLPE--------LP--ESLEALDVST 189 (571)
T ss_dssp CSSCCSCC-CC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC--------CC--TTCCEEECCS
T ss_pred CCCcCCCC-CC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCCcch--------hh--CCCCEEECcC
Confidence 77777764 33 46777777777777776554 45667777777777665332 22 6677777777
Q ss_pred CcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCC
Q 048668 198 NQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSI 277 (725)
Q Consensus 198 N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 277 (725)
|+|+ .+|. +.. .| +.....|+.|+|++|+|+. +|..+..+++|++|+|++|.+++.+
T Consensus 190 N~L~-~lp~-~~~---~L-----------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 190 NLLE-SLPA-VPV---RN-----------------HHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp SCCS-SCCC-CC----------------------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred CCCC-chhh-HHH---hh-----------------hcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 7666 3332 111 00 1112334999999999995 5666777999999999999999988
Q ss_pred CCCCcCCCC
Q 048668 278 PSGLGNLTK 286 (725)
Q Consensus 278 ~~~~~~l~~ 286 (725)
|..+..+..
T Consensus 247 p~~l~~l~~ 255 (571)
T 3cvr_A 247 RESLSQQTA 255 (571)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhc
Confidence 887766543
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.9e-20 Score=209.66 Aligned_cols=193 Identities=22% Similarity=0.303 Sum_probs=122.6
Q ss_pred cccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 12 LFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 12 l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
+..+..+.+..+.+....+ +..+++|+.|++++|.+... | .|..+++|++|+|++|+|+++.+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3345556666666653322 45666777777777777633 3 46667777777777777765444 66777777777
Q ss_pred ccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCC
Q 048668 92 LTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLG 171 (725)
Q Consensus 92 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 171 (725)
|++|.|+ .+| .+..+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|+|+++ ..|..+++|+.|+|++|.+.
T Consensus 94 Ls~N~l~-~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 94 LDENKIK-DLS--SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp CCSSCCC-CCT--TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred CcCCCCC-CCh--hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 7777776 444 345677777777777777654 3466777777777777777765 45667777777777777766
Q ss_pred ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceec
Q 048668 172 IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGT 228 (725)
Q Consensus 172 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~ 228 (725)
.+.+ +..+++|+.|+|++|+|++. ..+..++ +|+.|++++|.+.+.
T Consensus 167 ~~~~--------l~~l~~L~~L~Ls~N~i~~l--~~l~~l~-~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 167 DIVP--------LAGLTKLQNLYLSKNHISDL--RALAGLK-NLDVLELFSQECLNK 212 (605)
T ss_dssp CCGG--------GTTCTTCCEEECCSSCCCBC--GGGTTCT-TCSEEECCSEEEECC
T ss_pred Cchh--------hccCCCCCEEECcCCCCCCC--hHHccCC-CCCEEEccCCcCcCC
Confidence 4332 55667777777777777642 2344544 566666666666543
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=5.8e-21 Score=192.08 Aligned_cols=171 Identities=23% Similarity=0.271 Sum_probs=148.8
Q ss_pred CcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCcee
Q 048668 11 SLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYF 90 (725)
Q Consensus 11 ~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 90 (725)
++.+++.+++++|.++. ++ .+..+++|++|++++|+++. +| .+..+++|++|+|++|+|+++.+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 56788999999999984 44 68899999999999999984 44 68999999999999999997655 9999999999
Q ss_pred eccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccC
Q 048668 91 YLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNL 170 (725)
Q Consensus 91 ~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l 170 (725)
+|++|+++ .+|... . ++|+.|+|++|+|+++ ..+..+++|++|+|++|+|++++ .+..+++|++|++++|.+
T Consensus 91 ~L~~N~l~-~l~~~~--~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLK-NLNGIP--S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCS-CCTTCC--C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCC
T ss_pred ECCCCccC-CcCccc--c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcC
Confidence 99999998 677533 3 9999999999999976 35899999999999999999874 688999999999999999
Q ss_pred CccCCCCcccccccCCCCCCCEEECccCccccc
Q 048668 171 GIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGE 203 (725)
Q Consensus 171 ~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 203 (725)
+.. ..+..+++|++|++++|.+++.
T Consensus 163 ~~~--------~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 163 TNT--------GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBC--------TTSTTCCCCCEEEEEEEEEECC
T ss_pred cch--------HHhccCCCCCEEeCCCCcccCC
Confidence 865 2367889999999999998844
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1e-19 Score=179.06 Aligned_cols=143 Identities=21% Similarity=0.288 Sum_probs=133.5
Q ss_pred ccCCccccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 3 GQIPKEIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 3 ~~ip~~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
++||..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|.
T Consensus 32 ~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 109 (229)
T 3e6j_A 32 ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFD 109 (229)
T ss_dssp SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhC
Confidence 47888777 5999999999999988899999999999999999999988888899999999999999999988888899
Q ss_pred ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCcccccc
Q 048668 83 NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGK 149 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 149 (725)
.+++|++|+|++|+|+ .+|..+ ..+++|++|+|++|+|+++.+..|..+++|++|+|++|++...
T Consensus 110 ~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 110 RLVHLKELFMCCNKLT-ELPRGI-ERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TCTTCCEEECCSSCCC-SCCTTG-GGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cchhhCeEeccCCccc-ccCccc-ccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 9999999999999999 898765 7899999999999999999888999999999999999999854
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=4.5e-20 Score=206.64 Aligned_cols=172 Identities=26% Similarity=0.338 Sum_probs=122.6
Q ss_pred cCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCce
Q 048668 10 GSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEY 89 (725)
Q Consensus 10 ~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 89 (725)
..+++|+.|++++|.|. .++ .|..+++|+.|+|++|+|++..| |..+++|++|+|++|.|++. | .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCE
Confidence 45667777777777776 333 47777777777777777775554 77777777777777777642 2 5777777777
Q ss_pred eeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCcc
Q 048668 90 FYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNN 169 (725)
Q Consensus 90 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~ 169 (725)
|+|++|+|+ .++ .+..+++|+.|+|++|+|+++ ..|..+++|+.|+|++|+|+++.+ |..+++|+.|+|++|.
T Consensus 114 L~Ls~N~l~-~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 114 LSLEHNGIS-DIN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EECTTSCCC-CCG--GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEecCCCCC-CCc--cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 777777776 443 256777777777777777765 467777777777777777777665 7777777777777777
Q ss_pred CCccCCCCcccccccCCCCCCCEEECccCcccc
Q 048668 170 LGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGG 202 (725)
Q Consensus 170 l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 202 (725)
++.++ .+..+++|+.|+|++|.+.+
T Consensus 187 i~~l~--------~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 187 ISDLR--------ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCBCG--------GGTTCTTCSEEECCSEEEEC
T ss_pred CCCCh--------HHccCCCCCEEEccCCcCcC
Confidence 76542 25677777777777777764
No 367
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=1.9e-20 Score=195.36 Aligned_cols=275 Identities=13% Similarity=0.071 Sum_probs=170.8
Q ss_pred ccCCccccC--cccCcEEecCCCccCccCCccccC-CCCCcEEEccCCcCC--ccCCCCCCCCCCCCEEEccCCcccccC
Q 048668 3 GQIPKEIGS--LFKLQALALAGNYLTGKLPDFIGN-LSALQVIHIKGNSLG--GKFPTTLGLLRNLVQLNVAENKFYGMF 77 (725)
Q Consensus 3 ~~ip~~~~~--l~~l~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 77 (725)
|+++..+.. +.++++|.++++- ....-..+.. +++|++|||++|++. ...++.+.. +..+.+..|. +.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~---~~~~~~~~~~---I~ 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN---GKFYIYMANF---VP 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG---GCCEEECTTE---EC
T ss_pred CcHHhhccchhhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccccccc---cccccccccc---cC
Confidence 445555544 6789999998762 2222334444 889999999999998 444444433 5667777674 45
Q ss_pred cccccc--------cCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCcc----
Q 048668 78 PRSICN--------ISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQ---- 145 (725)
Q Consensus 78 ~~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~---- 145 (725)
+.+|.+ +++|+.|+|.+ .++ .++..+|.++++|+.|++.+|.++.+.+.+|.++.++..+.++.+.
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRF 163 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHT
T ss_pred HHHhcccccccccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhc
Confidence 678888 99999999999 898 8999999999999999999999999999999999889888887743
Q ss_pred ccccCccCcccccccC-eeecCCccCCccCC---------CC------------cccccccCCCCCCCEEECccCccccc
Q 048668 146 FKGKVSIDFSSLKILW-RLNLEQNNLGIGAA---------ND------------LGFVTFLTNCSSLKVLSLSDNQFGGE 203 (725)
Q Consensus 146 i~~~~~~~f~~l~~L~-~L~L~~N~l~~~~~---------~~------------~~~~~~~~~l~~L~~L~L~~N~l~~~ 203 (725)
...+...+|..+..|+ .+.+....- ++. .. ..+......+++|++|+|++|+++..
T Consensus 164 ~~~i~~~~f~~~~~L~~~i~~~~~~~--l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I 241 (329)
T 3sb4_A 164 KNRWEHFAFIEGEPLETTIQVGAMGK--LEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTI 241 (329)
T ss_dssp STTTTTSCEEESCCCEEEEEECTTCC--HHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEE
T ss_pred cccccccccccccccceeEEecCCCc--HHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCccee
Confidence 3455666777666666 333332110 000 00 00000001245555666655555543
Q ss_pred CChhhhhccccceeEEecCccceeccCcccccccCCc-eEEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCc
Q 048668 204 LPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLI-ALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLG 282 (725)
Q Consensus 204 ~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 282 (725)
.+.+|.++. .|+.+.+.+| +....+.+|.++.+|+ .+++.. .++.+.+.+|.++++|+.|+++.|.++...+.+|.
T Consensus 242 ~~~aF~~~~-~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 242 PDFTFAQKK-YLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp CTTTTTTCT-TCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred cHhhhhCCC-CCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 334444444 5555555554 4444445555555555 555555 45445555555555555555555555544455555
Q ss_pred CCCCCCEEe
Q 048668 283 NLTKLAKLD 291 (725)
Q Consensus 283 ~l~~L~~L~ 291 (725)
++++|+.++
T Consensus 319 ~~~~L~~ly 327 (329)
T 3sb4_A 319 NGVPSKLIY 327 (329)
T ss_dssp TTCCCCEEE
T ss_pred CCcchhhhc
Confidence 555555554
No 368
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=4e-20 Score=185.41 Aligned_cols=138 Identities=21% Similarity=0.207 Sum_probs=107.3
Q ss_pred CCCCCcccccccceEEEEEEECCCceE--EEEEEeeccccc------------------------hHHHHHHHHHHHHcC
Q 048668 533 EFSSSNMIGQGSFGSVYKGILGEDEMI--VAVKVINLKQKG------------------------AFRSFVAECEALRNI 586 (725)
Q Consensus 533 ~~~~~~~ig~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 586 (725)
-|+..+.||+|+||.||+|++..+|+. ||||+++..... ....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999998667888 999997543111 113678999999999
Q ss_pred CCCcc--cceeeEeecCCCCCcceeeEEEeccCC-C----CHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHH-h
Q 048668 587 RHRNL--IKIITICSSTDFKGVDFKALVFEYMGN-G----SLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLH-H 658 (725)
Q Consensus 587 ~h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~ 658 (725)
.|+++ +..+++ +..++||||+++ | +|.++... .++..+..++.|++.|++|+| +
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~ 189 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQE 189 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHT
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHH
Confidence 98864 344432 246899999942 4 67766432 123356789999999999999 8
Q ss_pred cCCCCcEecCCCCCCeeecCCCceEEccccccccc
Q 048668 659 HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 659 ~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~ 693 (725)
. +|+||||||+|||++. .++|+|||+|...
T Consensus 190 ~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 190 A---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp S---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred C---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 8 9999999999999998 9999999999765
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=2.6e-19 Score=171.92 Aligned_cols=153 Identities=16% Similarity=0.175 Sum_probs=81.0
Q ss_pred cCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCcc
Q 048668 34 GNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLK 113 (725)
Q Consensus 34 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 113 (725)
..+++|++|++++|+++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+. .+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~-~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIP-NLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSC-CCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccCh-hhcCCCCCC
Confidence 44455555555555555 333 3555555555555555443 222455555555555555555522222 234555555
Q ss_pred EEEccCceeeeeCCCcccccCccceecCCCcc-ccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCE
Q 048668 114 ELGIGANNFFGLIPDSLSNASNLELLDLSNNQ-FKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKV 192 (725)
Q Consensus 114 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~-i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~ 192 (725)
+|+|++|++++..+..+..+++|++|+|++|+ ++.++ .+..+++|++|++++|.++.+. .+..+++|++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~~--------~l~~l~~L~~ 185 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHDYR--------GIEDFPKLNQ 185 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCCCT--------TGGGCSSCCE
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcChH--------HhccCCCCCE
Confidence 55555555555445555555666666666665 55442 3555566666666666655432 2445566666
Q ss_pred EECccCccc
Q 048668 193 LSLSDNQFG 201 (725)
Q Consensus 193 L~L~~N~l~ 201 (725)
|++++|+|.
T Consensus 186 L~l~~N~i~ 194 (197)
T 4ezg_A 186 LYAFSQTIG 194 (197)
T ss_dssp EEECBC---
T ss_pred EEeeCcccC
Confidence 666666654
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.79 E-value=1.5e-19 Score=172.59 Aligned_cols=137 Identities=23% Similarity=0.282 Sum_probs=111.6
Q ss_pred ceecccCCccCCCcch-hhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCC
Q 048668 324 LYLDLSNNLLNGSLPQ-QVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSC 402 (725)
Q Consensus 324 ~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 402 (725)
++|++++|.+++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 32 ~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 111 (192)
T 1w8a_A 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111 (192)
T ss_dssp SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCS
T ss_pred CEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 5677777777655553 488899999999999999988899999999999999999999988888899999999999999
Q ss_pred CcccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCCCCC
Q 048668 403 NNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGIDEL 460 (725)
Q Consensus 403 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~ 460 (725)
|+|++..|..|..+++|++|+|++|+|+|.++.......++...+.++...|+.+...
T Consensus 112 N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l 169 (192)
T 1w8a_A 112 NQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKV 169 (192)
T ss_dssp SCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTT
T ss_pred CcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHH
Confidence 9999999999999999999999999999888754322223333455666678776544
No 371
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=6e-20 Score=191.58 Aligned_cols=286 Identities=12% Similarity=0.094 Sum_probs=180.8
Q ss_pred CCCCCcEEEccCCcCCccCCCCCCC-CCCCCEEEccCCccc--ccCcccccccCCCceeeccCCCCCCCCChhhhcC---
Q 048668 35 NLSALQVIHIKGNSLGGKFPTTLGL-LRNLVQLNVAENKFY--GMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVN--- 108 (725)
Q Consensus 35 ~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~--- 108 (725)
.+.+++.|.++++- ....-..+.. +++|++|||++|+|. ...+..+. .++.+.+..| .+|..+|.+
T Consensus 23 ~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~----~I~~~aF~~~~~ 94 (329)
T 3sb4_A 23 EANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMAN----FVPAYAFSNVVN 94 (329)
T ss_dssp HHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTT----EECTTTTEEEET
T ss_pred hhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccccc---cccccccccc----ccCHHHhccccc
Confidence 35688999998752 2121222333 788999999999998 33333333 3566666666 567788888
Q ss_pred -----CCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccC----CccCCCCcc
Q 048668 109 -----LPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNL----GIGAANDLG 179 (725)
Q Consensus 109 -----l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l----~~~~~~~~~ 179 (725)
+++|+.|+|.+ .++.+.+.+|.++++|++|++++|.+..+.+.+|.+..++.++.+..+.. ..+..
T Consensus 95 ~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~---- 169 (329)
T 3sb4_A 95 GVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEH---- 169 (329)
T ss_dssp TEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTT----
T ss_pred ccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccc----
Confidence 99999999999 89989999999999999999999999999999999988787777766322 11111
Q ss_pred cccccCCCCCCC-EEECccCcccccCChhhhhc---cccceeEEecCccceeccCcccccccCCceEEecccccCCCCCh
Q 048668 180 FVTFLTNCSSLK-VLSLSDNQFGGELPHSIANL---SSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPD 255 (725)
Q Consensus 180 ~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 255 (725)
..|.++..|+ .+++.... .++..+... ...+..+.+.++-...........+++|+.++|++|+++.+.+.
T Consensus 170 --~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~ 244 (329)
T 3sb4_A 170 --FAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDF 244 (329)
T ss_dssp --SCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTT
T ss_pred --cccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHh
Confidence 2244556666 45444322 222222211 11333333333211111110011245566666666666555555
Q ss_pred hhcCCCCccEEeccCcccccCCCCCCcCCCCCC-EEeCCCCcCCCccccccccccccccccccccccccceecccCCccC
Q 048668 256 VIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLA-KLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLN 334 (725)
Q Consensus 256 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~ 334 (725)
+|.++++|+.|+|.+| +....+.+|.++++|+ .+++.+ .++
T Consensus 245 aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-------------------------------------~l~ 286 (329)
T 3sb4_A 245 TFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-------------------------------------SVT 286 (329)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-------------------------------------TCC
T ss_pred hhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-------------------------------------cce
Confidence 5666666666666555 4444555555555555 555544 333
Q ss_pred CCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEc
Q 048668 335 GSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDI 376 (725)
Q Consensus 335 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 376 (725)
...+.+|.++++|+.++++.|.++...+.+|.++++|+.++.
T Consensus 287 ~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 287 AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 345677888888999998888888777888888888888874
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.3e-19 Score=182.25 Aligned_cols=103 Identities=19% Similarity=0.253 Sum_probs=50.5
Q ss_pred CCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEE
Q 048668 36 LSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKEL 115 (725)
Q Consensus 36 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 115 (725)
+.++..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|++|+|++|+|+ .++. +.++++|++|
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~-~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQIS-DLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCSSCCEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccC-CChh--hccCCCCCEE
Confidence 344555555555555332 34555555555555555553 22 4555555555555555555 3333 3455555555
Q ss_pred EccCceeeeeCCCcccccCccceecCCCccccc
Q 048668 116 GIGANNFFGLIPDSLSNASNLELLDLSNNQFKG 148 (725)
Q Consensus 116 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~ 148 (725)
+|++|+++++.+ +.. ++|++|+|++|+|++
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~ 120 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRD 120 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSB
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCC
Confidence 555555544322 111 445555555554443
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=7.4e-21 Score=211.82 Aligned_cols=204 Identities=19% Similarity=0.130 Sum_probs=113.5
Q ss_pred CCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCcc
Q 048668 185 TNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQ 264 (725)
Q Consensus 185 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 264 (725)
..+++|+.|+|++|+++ .+|..++++. .|+.|++++|......|. .+..+.+.+.+|..+..+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~-~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCK-ELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHH-HHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHH-HHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhcc
Confidence 45778888888888887 6788777777 677777655542111110 0011123334455555555555
Q ss_pred EEe-ccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhc
Q 048668 265 LLG-LYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGN 343 (725)
Q Consensus 265 ~L~-L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~ 343 (725)
.|+ ++.|.+. .|..+.+++|.++ .+|.. . ++.|+|++|.+++ +|. |+.
T Consensus 413 ~L~~l~~n~~~-----------~L~~l~l~~n~i~------------~l~~~-----~-L~~L~Ls~n~l~~-lp~-~~~ 461 (567)
T 1dce_A 413 AVDPMRAAYLD-----------DLRSKFLLENSVL------------KMEYA-----D-VRVLHLAHKDLTV-LCH-LEQ 461 (567)
T ss_dssp HHCGGGHHHHH-----------HHHHHHHHHHHHH------------HHHHT-----T-CSEEECTTSCCSS-CCC-GGG
T ss_pred cCcchhhcccc-----------hhhhhhhhccccc------------ccCcc-----C-ceEEEecCCCCCC-CcC-ccc
Confidence 555 4444332 2333333333322 11111 1 2445555555554 333 666
Q ss_pred CCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccC-cccccCCCCCCeE
Q 048668 344 LKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQF-PKFLENLSFLEFL 422 (725)
Q Consensus 344 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L 422 (725)
+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 666666666666666 555566666666666666666664 33 5666666666666666666554 6666666666666
Q ss_pred EcccccCeeecCC
Q 048668 423 NLSYNHLEGEVPT 435 (725)
Q Consensus 423 ~l~~N~l~~~~p~ 435 (725)
+|++|++++.+|.
T Consensus 539 ~L~~N~l~~~~~~ 551 (567)
T 1dce_A 539 NLQGNSLCQEEGI 551 (567)
T ss_dssp ECTTSGGGGSSSC
T ss_pred EecCCcCCCCccH
Confidence 6666666655554
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.4e-21 Score=217.73 Aligned_cols=204 Identities=18% Similarity=0.156 Sum_probs=123.7
Q ss_pred CCCCCCCEEEccCCcccccCcccccccCCCceeeccCCC-------------CCCCCChhhhcCCCCccEEE-ccCceee
Q 048668 58 GLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNR-------------FSGSLPFDIVVNLPNLKELG-IGANNFF 123 (725)
Q Consensus 58 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~~l~~L~~L~-L~~N~i~ 123 (725)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +. ..+...+..+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~-~~~~~~l~~l~~L~~L~~l~~n~~- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPL-LYEKETLQYFSTLKAVDPMRAAYL- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTG-GGHHHHHHHHHHHHHHCGGGHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccc-cCCHHHHHHHHhcccCcchhhccc-
Confidence 45666777777777775 556667777777777776553 22 12223334445555554 333322
Q ss_pred eeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCccccc
Q 048668 124 GLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGE 203 (725)
Q Consensus 124 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 203 (725)
.+|+.+.+++|.|+.+++ ..|+.|+|++|.|+.++ . +.++++|++|+|++|+|+ .
T Consensus 423 ----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~lp-------~-~~~l~~L~~L~Ls~N~l~-~ 477 (567)
T 1dce_A 423 ----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVLC-------H-LEQLLLVTHLDLSHNRLR-A 477 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSCC-------C-GGGGTTCCEEECCSSCCC-C
T ss_pred ----------chhhhhhhhcccccccCc------cCceEEEecCCCCCCCc-------C-ccccccCcEeecCccccc-c
Confidence 233344444444443322 13666666666666432 2 456667777777777776 5
Q ss_pred CChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCC-ChhhcCCCCccEEeccCcccccCCCCC--
Q 048668 204 LPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTI-PDVIGELKNLQLLGLYKNFLQGSIPSG-- 280 (725)
Q Consensus 204 ~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~-- 280 (725)
+|..+..++ .|+.|++++|.|++ +| .++.+++|++|+|++|+|++.. |..|..+++|++|+|++|.+++.+|..
T Consensus 478 lp~~~~~l~-~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 554 (567)
T 1dce_A 478 LPPALAALR-CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQER 554 (567)
T ss_dssp CCGGGGGCT-TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTH
T ss_pred cchhhhcCC-CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHH
Confidence 566666555 56666666666664 44 6777778888888888888776 777888888888888888887654432
Q ss_pred -CcCCCCCCEEeC
Q 048668 281 -LGNLTKLAKLDL 292 (725)
Q Consensus 281 -~~~l~~L~~L~L 292 (725)
+..+++|+.|++
T Consensus 555 l~~~lp~L~~L~l 567 (567)
T 1dce_A 555 LAEMLPSVSSILT 567 (567)
T ss_dssp HHHHCTTCSEEEC
T ss_pred HHHHCcccCccCC
Confidence 223677777754
No 375
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.77 E-value=1.3e-17 Score=177.53 Aligned_cols=245 Identities=11% Similarity=0.120 Sum_probs=156.0
Q ss_pred ccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeec
Q 048668 13 FKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYL 92 (725)
Q Consensus 13 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 92 (725)
..++++.+.++ ++.+...+|.+. +|+.+++..+ ++.+...+|.+. +|+.+.|.. .++.+.+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 45666666553 443555677774 6888887766 666777777774 688888874 666677778888888888888
Q ss_pred cCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCc
Q 048668 93 TSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGI 172 (725)
Q Consensus 93 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~ 172 (725)
++|+++ .++..+|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ ++|+.+.+ .+.++.
T Consensus 188 ~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 188 SKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp TTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred CCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 888887 77777776 477888888744 77777778888888888888764 66777777777 67777777 445555
Q ss_pred cCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCC
Q 048668 173 GAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGT 252 (725)
Q Consensus 173 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 252 (725)
++. .+|.++++|+.+++.+|.+.. +.+....+.+|.++.+|+.+.|. +.+..+
T Consensus 262 I~~------~aF~~c~~L~~l~l~~~~~~~--------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I 314 (401)
T 4fdw_A 262 IAS------RAFYYCPELAEVTTYGSTFND--------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRIL 314 (401)
T ss_dssp ECT------TTTTTCTTCCEEEEESSCCCC--------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEE
T ss_pred ECh------hHhhCCCCCCEEEeCCccccC--------------------CcccEECHHHhhCCccCCeEEeC-CceEEE
Confidence 544 456777788888877776540 00011233444555555555554 234444
Q ss_pred CChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcC
Q 048668 253 IPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSL 297 (725)
Q Consensus 253 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 297 (725)
...+|.++++|+.++|..| ++.....+|.++ +|+.+++.+|.+
T Consensus 315 ~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 315 GQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred hhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 4555555555555555333 333444455555 555555555543
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.7e-19 Score=207.18 Aligned_cols=162 Identities=19% Similarity=0.211 Sum_probs=104.3
Q ss_pred ccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCcccc
Q 048668 68 VAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFK 147 (725)
Q Consensus 68 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~ 147 (725)
++.|.+. ..+..|..+++|+.|+|++|+|+ .+|..+| .+++|++|+|++|.|+ .+|..|..+++|++|||++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 3344444 55667777777777777777777 7776665 6777777777777777 45667777888888888888887
Q ss_pred ccCccCcccccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCcccee
Q 048668 148 GKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISG 227 (725)
Q Consensus 148 ~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~ 227 (725)
.+ +..|..+++|++|+|++|.|+.++ ..|.++++|++|+|++|.|++.+|..+.........+++.+|.+++
T Consensus 284 ~l-p~~~~~l~~L~~L~L~~N~l~~lp-------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 284 SL-PAELGSCFQLKYFYFFDNMVTTLP-------WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp SC-CSSGGGGTTCSEEECCSSCCCCCC-------SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cc-ChhhcCCCCCCEEECCCCCCCccC-------hhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 55 556777888888888888776543 3367888999999999999988888887765444456677777777
Q ss_pred ccCcccccccCCceEEeccc
Q 048668 228 TIPLGIRNLVNLIALAVEVN 247 (725)
Q Consensus 228 ~~~~~~~~l~~L~~L~L~~N 247 (725)
.+|.. |..|+++.|
T Consensus 356 ~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 356 PLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCCC---------------
T ss_pred cCccc------cceeEeecc
Confidence 66654 334555555
No 377
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=5.2e-19 Score=169.78 Aligned_cols=153 Identities=15% Similarity=0.183 Sum_probs=95.1
Q ss_pred cCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCce
Q 048668 10 GSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEY 89 (725)
Q Consensus 10 ~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 89 (725)
..+++|++|++++|.|+ .+| .+..+++|++|++++|.++ .+..|..+++|++|+|++|++++..+..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556667777777666 444 4666666777777776554 2235666667777777777666656666666667777
Q ss_pred eeccCCCCCCCCChhhhcCCCCccEEEccCce-eeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCc
Q 048668 90 FYLTSNRFSGSLPFDIVVNLPNLKELGIGANN-FFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQN 168 (725)
Q Consensus 90 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N 168 (725)
|+|++|++++..| ..+..+++|++|+|++|. ++.+ + .+..+++|++|++++|+|+++. .+..+++|++|++++|
T Consensus 117 L~Ls~n~i~~~~~-~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSIL-TKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGH-HHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC
T ss_pred EEecCCccCcHhH-HHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCc
Confidence 7777776663223 344566677777777666 5443 2 4666666777777777666544 5666666777777766
Q ss_pred cCC
Q 048668 169 NLG 171 (725)
Q Consensus 169 ~l~ 171 (725)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 654
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.76 E-value=1.8e-18 Score=161.39 Aligned_cols=135 Identities=18% Similarity=0.227 Sum_probs=92.4
Q ss_pred ccCcEEecCCCccC-ccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 13 FKLQALALAGNYLT-GKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 13 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
++|++|++++|.++ +.+|..+..+++|++|++++|++++. ..|..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46777777777776 56676677777777777777777654 6677777777777777777766666666777777777
Q ss_pred ccCCCCCCCCCh-hhhcCCCCccEEEccCceeeeeCC---CcccccCccceecCCCccccccC
Q 048668 92 LTSNRFSGSLPF-DIVVNLPNLKELGIGANNFFGLIP---DSLSNASNLELLDLSNNQFKGKV 150 (725)
Q Consensus 92 L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~Ls~N~i~~~~ 150 (725)
|++|+|+ .+|. ..+..+++|++|++++|.+++..+ ..|..+++|++|++++|.+..++
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 7777776 5442 445666666667666666665544 35666666666666666665544
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=5.1e-18 Score=161.90 Aligned_cols=130 Identities=23% Similarity=0.356 Sum_probs=103.8
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCC-CCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPT-TLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
.+++++++|+++ .+|..+.. +|++|++++|++++..+. .|+.+++|++|+|++|+|+++.|..|.++++|++|+|+
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 378888888886 67765543 788888888888866664 47888888888888888887778888888888888888
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccc
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKG 148 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~ 148 (725)
+|+|+ .++...|.++++|++|+|++|+|+++.|..|..+++|++|+|++|++++
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 87 ENKIK-EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp SCCCC-EECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCcCC-ccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 88887 6666667778888888888888888888888888888888888888774
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=5e-17 Score=173.05 Aligned_cols=247 Identities=11% Similarity=0.081 Sum_probs=202.6
Q ss_pred cccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCC
Q 048668 8 EIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSL 87 (725)
Q Consensus 8 ~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 87 (725)
.|.++ +|+++.+.++ ++.+...+|.+. +|+.+.+.. .++.+.+.+|.++++|+.++|++|+++.+...+|. .++|
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 44554 7999999887 775667789984 799999996 78888899999999999999999999988888998 5899
Q ss_pred ceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCC
Q 048668 88 EYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQ 167 (725)
Q Consensus 88 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~ 167 (725)
+.+.|..+ ++ .++..+|.++++|+.+++..| ++.+...+|.+ .+|+.++| .|.++.+...+|.++++|+.+++.+
T Consensus 206 ~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~ 280 (401)
T 4fdw_A 206 EEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYG 280 (401)
T ss_dssp SEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEES
T ss_pred CEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCC
Confidence 99999955 87 899999999999999999975 78888899988 89999999 6778899999999999999999999
Q ss_pred ccCC-----ccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceE
Q 048668 168 NNLG-----IGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIAL 242 (725)
Q Consensus 168 N~l~-----~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L 242 (725)
|.+. .++. .+|.++++|+.+++.+ .++. ....+|.++.+|+.+
T Consensus 281 ~~~~~~~~~~I~~------~aF~~c~~L~~l~l~~-~i~~-------------------------I~~~aF~~c~~L~~l 328 (401)
T 4fdw_A 281 STFNDDPEAMIHP------YCLEGCPKLARFEIPE-SIRI-------------------------LGQGLLGGNRKVTQL 328 (401)
T ss_dssp SCCCCCTTCEECT------TTTTTCTTCCEECCCT-TCCE-------------------------ECTTTTTTCCSCCEE
T ss_pred ccccCCcccEECH------HHhhCCccCCeEEeCC-ceEE-------------------------EhhhhhcCCCCccEE
Confidence 8875 2332 5678888899888873 3552 234566777778888
Q ss_pred EecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCC-CCCEEeCCCCcCC
Q 048668 243 AVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLT-KLAKLDLGSNSLQ 298 (725)
Q Consensus 243 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 298 (725)
.|..| ++.+...+|.++ +|+.+++.+|.+....+..|.+++ .++.|++..+.+.
T Consensus 329 ~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 329 TIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 88544 666777788888 888888888887766677777774 6788888777543
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=3.7e-18 Score=162.85 Aligned_cols=136 Identities=24% Similarity=0.281 Sum_probs=110.9
Q ss_pred ceecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCC
Q 048668 324 LYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCN 403 (725)
Q Consensus 324 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 403 (725)
++|++++|.++ .+|..|..+++|+.|+|++|.|++..+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 34 ~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N 112 (193)
T 2wfh_A 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGN 112 (193)
T ss_dssp CEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCC
Confidence 66777777777 56688999999999999999999888899999999999999999999988889999999999999999
Q ss_pred cccccCcccccCCCCCCeEEcccccCeeecCCCCccCCCCCcCccCCccccCCCCCC
Q 048668 404 NFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGVFSNKSKIPLQGNVRLCGGIDEL 460 (725)
Q Consensus 404 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~ 460 (725)
+|++..+..|..+++|+.|+|++|+|.|.+........+.......+...|..|...
T Consensus 113 ~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~~~~~~~~~~C~~P~~l 169 (193)
T 2wfh_A 113 DISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEM 169 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHSSCCCSCCBEEESGGG
T ss_pred CCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHhccCCCCCcCcCCchHH
Confidence 999888888999999999999999999887643211111111222334567766544
No 382
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.73 E-value=1.1e-16 Score=171.17 Aligned_cols=333 Identities=12% Similarity=0.082 Sum_probs=179.5
Q ss_pred cCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChh
Q 048668 25 LTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFD 104 (725)
Q Consensus 25 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 104 (725)
++.+-..+|.++++|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +. .++..
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecce
Confidence 4444456788888888888864 477677778888888888888754 66577778888888888777655 44 66666
Q ss_pred hhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCccccccc
Q 048668 105 IVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGFVTFL 184 (725)
Q Consensus 105 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 184 (725)
+|.+...+....... +..+...+|.++.+|+.+.+.++ +..+...+|.++.+|+.+.+..| ++.+.. .+|
T Consensus 135 aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~------~~F 204 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRD------YCF 204 (394)
T ss_dssp TTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECT------TTT
T ss_pred eeecccccccccCcc--ccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCc------hhh
Confidence 776665444333322 23355667888888888888655 34577777887777887777665 443333 345
Q ss_pred CCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCcc
Q 048668 185 TNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQ 264 (725)
Q Consensus 185 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 264 (725)
.++..|+.+.+..+... +... .....+|+.+.+..+ +..+...+|.++..|+
T Consensus 205 ~~~~~L~~i~~~~~~~~--i~~~-------------------------~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~ 256 (394)
T 4fs7_A 205 AECILLENMEFPNSLYY--LGDF-------------------------ALSKTGVKNIIIPDS-FTELGKSVFYGCTDLE 256 (394)
T ss_dssp TTCTTCCBCCCCTTCCE--ECTT-------------------------TTTTCCCCEEEECTT-CCEECSSTTTTCSSCC
T ss_pred ccccccceeecCCCceE--eehh-------------------------hcccCCCceEEECCC-ceecccccccccccce
Confidence 66677776666555432 1111 112233444444322 2223344555555555
Q ss_pred EEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcC
Q 048668 265 LLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNL 344 (725)
Q Consensus 265 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l 344 (725)
.+.+..+... .....|.....++.+....+ .++...+.....++.+.+.++ ++.....+|.++
T Consensus 257 ~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~---------------~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c 319 (394)
T 4fs7_A 257 SISIQNNKLR-IGGSLFYNCSGLKKVIYGSV---------------IVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESC 319 (394)
T ss_dssp EEEECCTTCE-ECSCTTTTCTTCCEEEECSS---------------EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC
T ss_pred eEEcCCCcce-eeccccccccccceeccCce---------------eeccccccccccccccccccc-cceechhhhcCC
Confidence 5555554332 33444555555544444333 122222211111122333222 222233445555
Q ss_pred CCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCC
Q 048668 345 KNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLE 420 (725)
Q Consensus 345 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 420 (725)
.+|+.++|..+ ++.....+|.++.+|+.+++..| ++.+...+|.++.+|+.+++..+ ++ .+..+|.+.++|+
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~ 391 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFK 391 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEE
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCc
Confidence 55555555432 44344455555555555555544 44444455555555555555433 22 2234454444444
No 383
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=1.2e-18 Score=200.09 Aligned_cols=181 Identities=25% Similarity=0.274 Sum_probs=87.4
Q ss_pred ccCcccccccCCceEEecccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCcccccccc
Q 048668 228 TIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNK 307 (725)
Q Consensus 228 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 307 (725)
..+..+..+.+|+.|+|++|.+.. +|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~--------- 283 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT--------- 283 (727)
T ss_dssp -------CCCCCCEEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS---------
T ss_pred cChhhhccCCCCcEEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC---------
Confidence 334555556666666666666653 3333445666666666666666 55555666666666666666554
Q ss_pred ccccccccccccccccceecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccC-CcEEEccCCccccccC
Q 048668 308 LIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVS-LEYVDISSNCFHGIIP 386 (725)
Q Consensus 308 ~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~ 386 (725)
.+|..+..+..+ ++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|
T Consensus 284 ---~lp~~~~~l~~L-~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 284 ---SLPAELGSCFQL-KYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp ---SCCSSGGGGTTC-SEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred ---ccChhhcCCCCC-CEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 455555555554 56666666665 45556777777777777777777777776654322 2346777777777666
Q ss_pred ccccCCCCCCEEeCCCC--------cccccCcccccCCCCCCeEEcccccCe
Q 048668 387 PSLGFLKSIKFLDVSCN--------NFSGQFPKFLENLSFLEFLNLSYNHLE 430 (725)
Q Consensus 387 ~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~l~~N~l~ 430 (725)
.. |+.|++++| .+.+..+..+..+..+....+++|.+.
T Consensus 359 ~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 359 HE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp CC-----------------------------------------------CCC
T ss_pred cc------cceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 53 445556666 333344444555555666666666664
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=1.9e-17 Score=157.92 Aligned_cols=127 Identities=20% Similarity=0.302 Sum_probs=82.3
Q ss_pred cEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCC
Q 048668 16 QALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSN 95 (725)
Q Consensus 16 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 95 (725)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+++.+.+|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56667777766 4555443 46666777777665 45566666666666776666666666666666666666666666
Q ss_pred CCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCcccc
Q 048668 96 RFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFK 147 (725)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~ 147 (725)
+|+ .++...|.++++|++|+|++|+|+.+.+..|..+++|++|+|++|++.
T Consensus 89 ~l~-~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLR-CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCC-BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccC-EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666 555555666666666666666666665556666666666666666665
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.72 E-value=9.1e-18 Score=153.19 Aligned_cols=127 Identities=20% Similarity=0.247 Sum_probs=80.3
Q ss_pred ccCcEEecCCCccC-ccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceee
Q 048668 13 FKLQALALAGNYLT-GKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFY 91 (725)
Q Consensus 13 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 91 (725)
++|++|++++|.++ +.+|..+..+++|++|++++|++++. ..|+.+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46777777777776 56666667777777777777777644 5666677777777777777655666666667777777
Q ss_pred ccCCCCCCCCCh-hhhcCCCCccEEEccCceeeeeCC---CcccccCccceecCC
Q 048668 92 LTSNRFSGSLPF-DIVVNLPNLKELGIGANNFFGLIP---DSLSNASNLELLDLS 142 (725)
Q Consensus 92 L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~Ls 142 (725)
+++|+++ .+|. ..+..+++|++|++++|.+++..+ ..+..+++|++||++
T Consensus 95 ls~N~i~-~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIK-DLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCC-SHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCC-ChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777766 4331 334555566666666666555444 345555555555554
No 386
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=1.3e-17 Score=155.50 Aligned_cols=137 Identities=20% Similarity=0.228 Sum_probs=110.2
Q ss_pred CCCCCcEEEccCCcCC-ccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCcc
Q 048668 35 NLSALQVIHIKGNSLG-GKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLK 113 (725)
Q Consensus 35 ~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 113 (725)
..++|++|++++|+++ +.+|..|..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+| ..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLD-MLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCC-HHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHH-HHHhhCCCCC
Confidence 3478999999999997 67788888999999999999999865 778889999999999999984444 4556788999
Q ss_pred EEEccCceeeeeCC-CcccccCccceecCCCccccccCc---cCcccccccCeeecCCccCCccC
Q 048668 114 ELGIGANNFFGLIP-DSLSNASNLELLDLSNNQFKGKVS---IDFSSLKILWRLNLEQNNLGIGA 174 (725)
Q Consensus 114 ~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~---~~f~~l~~L~~L~L~~N~l~~~~ 174 (725)
+|+|++|+|+++.. ..+..+++|++|++++|+++++++ ..|..+++|++|++++|.+...+
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 99999999887643 678888889999999998887766 46777777777777777766544
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=6e-17 Score=152.43 Aligned_cols=131 Identities=21% Similarity=0.291 Sum_probs=105.4
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 678888888887 5565443 6888888888888877777788888888888888888877777788888888888888
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCcccccc
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGK 149 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 149 (725)
|+|+ .+|...|..+++|++|+|++|+++++.+..|..+++|++|+|++|++.+.
T Consensus 86 N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCcc-ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 8887 77777777888888888888888877777778888888888888887753
No 388
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.70 E-value=1.4e-15 Score=162.63 Aligned_cols=328 Identities=11% Similarity=0.053 Sum_probs=224.0
Q ss_pred cccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCC
Q 048668 8 EIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSL 87 (725)
Q Consensus 8 ~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 87 (725)
+|.++++|+++.|..+ ++.+...+|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++..+
T Consensus 66 AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 4678899999999754 77566779999999999999865 77788899999999999988755 555788899988765
Q ss_pred ceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCC
Q 048668 88 EYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQ 167 (725)
Q Consensus 88 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~ 167 (725)
+....... . .+...+|.++.+|+.+.+..+. ..+...+|.++.+|+.+++..| ++.+...+|.....|+.+.+..
T Consensus 143 ~~~~~~~~--~-~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 143 EITIPEGV--T-VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp EEECCTTC--C-EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred ccccCccc--c-ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 55544433 3 6677889999999999998664 5588889999999999999887 7788999999999999999887
Q ss_pred ccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEeccc
Q 048668 168 NNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVN 247 (725)
Q Consensus 168 N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N 247 (725)
+..... +......+|+.+.+..+. +......+.... .++.+.+..+... .....|..+..++.+.+..+
T Consensus 218 ~~~~i~--------~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~-~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 218 SLYYLG--------DFALSKTGVKNIIIPDSF-TELGKSVFYGCT-DLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp TCCEEC--------TTTTTTCCCCEEEECTTC-CEECSSTTTTCS-SCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred CceEee--------hhhcccCCCceEEECCCc-eecccccccccc-cceeEEcCCCcce-eeccccccccccceeccCce
Confidence 765432 123345678888876443 222233333333 4444444444332 33444445555555544443
Q ss_pred ccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceec
Q 048668 248 QLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLD 327 (725)
Q Consensus 248 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~ 327 (725)
.+ ...+|..+.+|+.+.+..+ ++.....+|.++.+|+.+++
T Consensus 287 ~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~l----------------------------------- 327 (394)
T 4fs7_A 287 IV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDL----------------------------------- 327 (394)
T ss_dssp EE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECC-----------------------------------
T ss_pred ee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEe-----------------------------------
Confidence 32 2334445555555555433 33333444445555544444
Q ss_pred ccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEE
Q 048668 328 LSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFL 398 (725)
Q Consensus 328 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 398 (725)
.++ ++.....+|.++.+|+.+++..| ++.....+|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 328 -p~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 328 -PYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp -CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred -CCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 322 33344567888888999988776 66667788999999999998765 33 345678888887764
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=3.8e-17 Score=149.06 Aligned_cols=129 Identities=22% Similarity=0.255 Sum_probs=110.9
Q ss_pred CCCCCcEEEccCCcCC-ccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCcc
Q 048668 35 NLSALQVIHIKGNSLG-GKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLK 113 (725)
Q Consensus 35 ~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 113 (725)
..++|++|++++|+++ +..|..|..+++|++|+|++|.+++. ..+..+++|++|++++|++++.+| ..+..+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLE-VLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTH-HHHHHCTTCC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHH-HHhhhCCCCC
Confidence 4478999999999998 78888999999999999999999866 789999999999999999984455 4566799999
Q ss_pred EEEccCceeeeeC-CCcccccCccceecCCCccccccCc---cCcccccccCeeecC
Q 048668 114 ELGIGANNFFGLI-PDSLSNASNLELLDLSNNQFKGKVS---IDFSSLKILWRLNLE 166 (725)
Q Consensus 114 ~L~L~~N~i~~~~-~~~~~~l~~L~~L~Ls~N~i~~~~~---~~f~~l~~L~~L~L~ 166 (725)
+|++++|+++++. +..+..+++|++|++++|+++++++ ..|..+++|++|+++
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9999999998753 4778999999999999999998876 567778888887775
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=2e-16 Score=148.91 Aligned_cols=129 Identities=22% Similarity=0.261 Sum_probs=95.2
Q ss_pred CCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEc
Q 048668 38 ALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGI 117 (725)
Q Consensus 38 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 117 (725)
..+.+++++|+++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+|+ .+|...|.++++|++|+|
T Consensus 8 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l 83 (177)
T 2o6r_A 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYL 83 (177)
T ss_dssp ETTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEEC
Confidence 3567888888887 4444433 67888888888888777777888888888888888887 777777777888888888
Q ss_pred cCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccC
Q 048668 118 GANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNL 170 (725)
Q Consensus 118 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l 170 (725)
++|+|+++.+..|..+++|++|+|++|+|+++++..|..+++|++|++++|.+
T Consensus 84 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 84 HENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 88888877777777778888888888887776665555555555555555544
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.68 E-value=5.9e-17 Score=152.30 Aligned_cols=135 Identities=20% Similarity=0.209 Sum_probs=74.0
Q ss_pred ccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCc
Q 048668 9 IGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLE 88 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 88 (725)
+.++.+|++|++++|+++ .+|......++|++|++++|++++. ..|..+++|++|+|++|+|+++.+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 444556666666666665 3343222233666666666666544 4556666666666666666655445556666666
Q ss_pred eeeccCCCCCCCCCh-hhhcCCCCccEEEccCceeeeeCCC---cccccCccceecCCCcccc
Q 048668 89 YFYLTSNRFSGSLPF-DIVVNLPNLKELGIGANNFFGLIPD---SLSNASNLELLDLSNNQFK 147 (725)
Q Consensus 89 ~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~---~~~~l~~L~~L~Ls~N~i~ 147 (725)
+|+|++|+|+ .+|. ..+..+++|+.|++++|.++.+.+. .+..+++|++||+++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666664 4543 2344555555555555555533211 2555555555555555544
No 392
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=2.5e-17 Score=170.74 Aligned_cols=139 Identities=14% Similarity=0.165 Sum_probs=99.6
Q ss_pred HHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeecccc--------------chHHH--------HHHHHHHHHcC
Q 048668 529 KATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------------GAFRS--------FVAECEALRNI 586 (725)
Q Consensus 529 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l 586 (725)
....-|++.+.||+|+||.||+|.+. +|+.||||+++.... ..... ..+|...|.++
T Consensus 92 ~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL 170 (397)
T 4gyi_A 92 ARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL 170 (397)
T ss_dssp HTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 33344888999999999999999985 789999999753210 00111 23456666666
Q ss_pred CCCccc--ceeeEeecCCCCCcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 048668 587 RHRNLI--KIITICSSTDFKGVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPM 664 (725)
Q Consensus 587 ~h~niv--~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 664 (725)
.+.++. ..+++ ...++||||++|+++.++... + ....++.|++.++.|+|.+ +|
T Consensus 171 ~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~----------~--~~~~l~~qll~~l~~lH~~---gI 226 (397)
T 4gyi_A 171 YEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV----------P--DPASLYADLIALILRLAKH---GL 226 (397)
T ss_dssp HHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC----------S--CHHHHHHHHHHHHHHHHHT---TE
T ss_pred HhcCCCCCeeeec---------cCceEEEEecCCccHhhhccc----------H--HHHHHHHHHHHHHHHHHHC---CC
Confidence 444332 22221 134799999999888765321 1 2346789999999999998 99
Q ss_pred EecCCCCCCeeecCCC----------ceEEcccccccc
Q 048668 665 VHGDLKPSNVLLDHDM----------VAHVGDFGLAKF 692 (725)
Q Consensus 665 vHrdlkp~Nill~~~~----------~~kl~Dfgla~~ 692 (725)
|||||||.|||+++++ .+.|+||+-+..
T Consensus 227 VHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 227 IHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp ECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred cCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 9999999999998876 389999997754
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=9.3e-17 Score=150.94 Aligned_cols=135 Identities=17% Similarity=0.227 Sum_probs=99.1
Q ss_pred ccccCCCCCcEEEccCCcCCccCCCCCCCC-CCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCC
Q 048668 31 DFIGNLSALQVIHIKGNSLGGKFPTTLGLL-RNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNL 109 (725)
Q Consensus 31 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l 109 (725)
..+.++++|++|++++|+++.+ |. +..+ ++|++|+|++|+|+++ ..|..+++|++|+|++|+|+ .+|..+|..+
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l 87 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQAL 87 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHC
T ss_pred HhcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcC
Confidence 3467788899999999999844 54 4444 4899999999998865 57888888888888888887 7777777788
Q ss_pred CCccEEEccCceeeeeCC-CcccccCccceecCCCccccccCcc---CcccccccCeeecCCccC
Q 048668 110 PNLKELGIGANNFFGLIP-DSLSNASNLELLDLSNNQFKGKVSI---DFSSLKILWRLNLEQNNL 170 (725)
Q Consensus 110 ~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~---~f~~l~~L~~L~L~~N~l 170 (725)
++|++|+|++|+|+.+.+ ..+..+++|++|++++|+++.++.. .+..+++|++|+++.|.+
T Consensus 88 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 88 PDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp TTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 888888888888865432 2677888888888888888765432 344555555555555443
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=3.5e-18 Score=164.11 Aligned_cols=137 Identities=21% Similarity=0.228 Sum_probs=105.3
Q ss_pred ccCcccCcEEecCCCccCccCCc------cccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCccccc
Q 048668 9 IGSLFKLQALALAGNYLTGKLPD------FIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSIC 82 (725)
Q Consensus 9 ~~~l~~l~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 82 (725)
+.....++.++++.+.+.+..|. .|..+++|++|++++|++++ +| .|..+++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34456778888888888877776 78888888888888888875 55 7888888888888888887 5666777
Q ss_pred ccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCC-CcccccCccceecCCCccccccCc
Q 048668 83 NISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIP-DSLSNASNLELLDLSNNQFKGKVS 151 (725)
Q Consensus 83 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~ 151 (725)
.+++|++|+|++|+|+ .+| .+..+++|++|+|++|+++.+.+ ..+..+++|++|++++|++++..+
T Consensus 91 ~~~~L~~L~L~~N~l~-~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 VADTLEELWISYNQIA-SLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHCSEEEEEEEECC-CHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCcCCEEECcCCcCC-cCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 7788888888888887 565 35677888888888888876543 467778888888888888876544
No 395
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.59 E-value=1.1e-13 Score=148.02 Aligned_cols=335 Identities=11% Similarity=0.107 Sum_probs=197.3
Q ss_pred cCccCCccccCCC-CCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCc---ccccCcccccccCCCceeeccCCCCCCC
Q 048668 25 LTGKLPDFIGNLS-ALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENK---FYGMFPRSICNISSLEYFYLTSNRFSGS 100 (725)
Q Consensus 25 l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 100 (725)
++.+-..+|.+.. .|+.+.+-.+ ++.+...+|.++.+|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++ .
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-E 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-E
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-e
Confidence 3434445777764 5888888754 777888888888888888888764 66677788888888888888765 55 7
Q ss_pred CChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCccc
Q 048668 101 LPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLGF 180 (725)
Q Consensus 101 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 180 (725)
++..+|.+..+|+.+.+..+ ++.+...+|..+.+|+.+.+..+ ++.+...+|.. ..|+.+.+..+-.. +..
T Consensus 128 I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~----- 198 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGT----- 198 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECT-----
T ss_pred ehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-ccc-----
Confidence 78888888888888888644 45577778888888888888655 66677778865 56888877665432 222
Q ss_pred ccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCC
Q 048668 181 VTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGEL 260 (725)
Q Consensus 181 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 260 (725)
.++.++.+++......+... .....+.......... ...+.....+..+.+. +.+..+...+|.++
T Consensus 199 -~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c 264 (394)
T 4gt6_A 199 -NAFSECFALSTITSDSESYP-AIDNVLYEKSANGDYA-----------LIRYPSQREDPAFKIP-NGVARIETHAFDSC 264 (394)
T ss_dssp -TTTTTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEE-----------EEECCTTCCCSEEECC-TTEEEECTTTTTTC
T ss_pred -chhhhccccceecccccccc-cccceeeccccccccc-----------ccccccccccceEEcC-CcceEcccceeeec
Confidence 34667777777776665544 1111111111000000 0001111223333332 22333445666667
Q ss_pred CCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchh
Q 048668 261 KNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQ 340 (725)
Q Consensus 261 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~ 340 (725)
.+|+.+.+..+... ....+|.++++|+.+.+..+ ++ . .....
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~~-i~------------~------------------------I~~~a 306 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSSR-IT------------E------------------------LPESV 306 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCTT-CC------------E------------------------ECTTT
T ss_pred ccccEEecccccce-ecCcccccccccccccCCCc-cc------------c------------------------cCcee
Confidence 77777776655433 44555666666666665422 11 1 22344
Q ss_pred hhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCcccccCCCCCC
Q 048668 341 VGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLE 420 (725)
Q Consensus 341 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 420 (725)
|.++.+|+.++|..+ ++.....+|.+|.+|+.+.+..+ ++.+-..+|.++++|+.+++.+|.... .++.....|+
T Consensus 307 F~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~ 381 (394)
T 4gt6_A 307 FAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQ 381 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-
T ss_pred ecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCC
Confidence 555666666666543 44444566666667777776543 554555666777777777776665431 3455556666
Q ss_pred eEEccccc
Q 048668 421 FLNLSYNH 428 (725)
Q Consensus 421 ~L~l~~N~ 428 (725)
.+.+..|.
T Consensus 382 ~i~i~~~~ 389 (394)
T 4gt6_A 382 NLPVAPGS 389 (394)
T ss_dssp --------
T ss_pred EEEeCCCC
Confidence 66655544
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=7.8e-15 Score=136.65 Aligned_cols=105 Identities=21% Similarity=0.325 Sum_probs=56.0
Q ss_pred cEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccC
Q 048668 40 QVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119 (725)
Q Consensus 40 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~ 119 (725)
++|++++|+|+ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|..+|.++++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCC
Confidence 44555555554 2333332 44555555555555544555555555555555555555 45555555555555555555
Q ss_pred ceeeeeCCCcccccCccceecCCCccccc
Q 048668 120 NNFFGLIPDSLSNASNLELLDLSNNQFKG 148 (725)
Q Consensus 120 N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~ 148 (725)
|+|+++.+..|..+++|++|+|++|+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 55555555555566666666666666553
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=1e-14 Score=135.77 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=100.1
Q ss_pred cCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 14 KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 14 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
..++|++++|.++ .+|..+. ++|++|+|++|+|+++.|..|..+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4689999999999 6787664 899999999999999999999999999999999999998888899999999999999
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeeee
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFGL 125 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~ 125 (725)
+|+|+ .+|...|..+++|++|+|++|.++..
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 99998 88888889999999999999999754
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.56 E-value=1.3e-14 Score=135.58 Aligned_cols=105 Identities=18% Similarity=0.351 Sum_probs=61.3
Q ss_pred cEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccC
Q 048668 40 QVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGA 119 (725)
Q Consensus 40 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~ 119 (725)
+.+++++|+++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|..+|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCC
Confidence 45555555554 3344333 45556666666665555555666666666666666665 55555555566666666666
Q ss_pred ceeeeeCCCcccccCccceecCCCccccc
Q 048668 120 NNFFGLIPDSLSNASNLELLDLSNNQFKG 148 (725)
Q Consensus 120 N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~ 148 (725)
|+|+++.+..|..+++|++|+|++|++..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 66665555556666666666666666653
No 399
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=7e-17 Score=154.95 Aligned_cols=140 Identities=20% Similarity=0.339 Sum_probs=122.0
Q ss_pred CcccCCc------cccCcccCcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCccc
Q 048668 1 LEGQIPK------EIGSLFKLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFY 74 (725)
Q Consensus 1 ~~~~ip~------~~~~l~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 74 (725)
++|.+|+ .+..+++|++|+|++|++++ +| .+..+++|++|++++|+++ .+|..+..+++|++|+|++|+++
T Consensus 30 l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~ 106 (198)
T 1ds9_A 30 LHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA 106 (198)
T ss_dssp CCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECC
T ss_pred eccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCC
Confidence 3566776 89999999999999999995 67 8999999999999999998 67888888899999999999998
Q ss_pred ccCcccccccCCCceeeccCCCCCCCCCh-hhhcCCCCccEEEccCceeeeeCCCc----------ccccCccceecCCC
Q 048668 75 GMFPRSICNISSLEYFYLTSNRFSGSLPF-DIVVNLPNLKELGIGANNFFGLIPDS----------LSNASNLELLDLSN 143 (725)
Q Consensus 75 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~----------~~~l~~L~~L~Ls~ 143 (725)
+ +| .+..+++|++|++++|+|+ .++. ..+..+++|++|++++|.+++..|.. +..+++|++|| +
T Consensus 107 ~-l~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~ 181 (198)
T 1ds9_A 107 S-LS-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--G 181 (198)
T ss_dssp C-HH-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--C
T ss_pred c-CC-ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--C
Confidence 6 44 6999999999999999998 6664 56789999999999999998776653 78888888887 7
Q ss_pred ccccc
Q 048668 144 NQFKG 148 (725)
Q Consensus 144 N~i~~ 148 (725)
|.++.
T Consensus 182 ~~i~~ 186 (198)
T 1ds9_A 182 MPVDV 186 (198)
T ss_dssp GGGTT
T ss_pred cccCH
Confidence 77764
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=2e-14 Score=134.34 Aligned_cols=107 Identities=21% Similarity=0.195 Sum_probs=99.2
Q ss_pred CcEEecCCCccCccCCccccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccC
Q 048668 15 LQALALAGNYLTGKLPDFIGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTS 94 (725)
Q Consensus 15 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 94 (725)
-+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 479999999997 7887665 8999999999999999999999999999999999999988888899999999999999
Q ss_pred CCCCCCCChhhhcCCCCccEEEccCceeeee
Q 048668 95 NRFSGSLPFDIVVNLPNLKELGIGANNFFGL 125 (725)
Q Consensus 95 N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~ 125 (725)
|+|+ .+|...|..+++|+.|+|++|.+...
T Consensus 91 N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLK-SIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred Cccc-eeCHHHhccccCCCEEEeCCCCcccc
Confidence 9998 88888889999999999999999844
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.53 E-value=1.1e-12 Score=140.15 Aligned_cols=329 Identities=10% Similarity=0.096 Sum_probs=229.1
Q ss_pred ccCcc-cCcEEecCCCccCccCCccccCCCCCcEEEccCCc---CCccCCCCCCCCCCCCEEEccCCcccccCccccccc
Q 048668 9 IGSLF-KLQALALAGNYLTGKLPDFIGNLSALQVIHIKGNS---LGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNI 84 (725)
Q Consensus 9 ~~~l~-~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 84 (725)
|.+++ .|+++.+-.+ ++.+-..+|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++.+...+|.++
T Consensus 59 F~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c 136 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHC 136 (394)
T ss_dssp TTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTC
T ss_pred ccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhh
Confidence 44554 5999999765 665677899999999999999874 77788899999999999999865 666888999999
Q ss_pred CCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeee
Q 048668 85 SSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLN 164 (725)
Q Consensus 85 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~ 164 (725)
.+|+.+.+..+ ++ .++..+|.+..+|+.+.+..+ ++.+...+|.. ..|+.+.+..+- +.+...+|.....+....
T Consensus 137 ~~L~~i~lp~~-~~-~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~ 211 (394)
T 4gt6_A 137 EELDTVTIPEG-VT-SVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-TRIGTNAFSECFALSTIT 211 (394)
T ss_dssp TTCCEEECCTT-CC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-CEECTTTTTTCTTCCEEE
T ss_pred cccccccccce-ee-eecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc-cccccchhhhccccceec
Confidence 99999999865 45 788899999999999999765 66687788865 679999997654 457888999999999888
Q ss_pred cCCccCCccCCCCcccccccCCCCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEe
Q 048668 165 LEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAV 244 (725)
Q Consensus 165 L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 244 (725)
...+........ .+........-.... +. . ..+..+.+. +.+......+|.++.+|+.+.+
T Consensus 212 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~-------~~----~-~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~l 272 (394)
T 4gt6_A 212 SDSESYPAIDNV------LYEKSANGDYALIRY-------PS----Q-REDPAFKIP-NGVARIETHAFDSCAYLASVKM 272 (394)
T ss_dssp ECCSSSCBSSSC------EEEECTTSCEEEEEC-------CT----T-CCCSEEECC-TTEEEECTTTTTTCSSCCEEEC
T ss_pred ccccccccccce------eeccccccccccccc-------cc----c-cccceEEcC-CcceEcccceeeecccccEEec
Confidence 777665433221 011111111100000 00 0 011222221 2333355677888999999999
Q ss_pred cccccCCCCChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccc
Q 048668 245 EVNQLHGTIPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSL 324 (725)
Q Consensus 245 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~ 324 (725)
..+.. .+...+|.++++|+.+.+. +.+......+|.++.+|+.+++..+ ++ .
T Consensus 273 p~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~------------~------------- 324 (394)
T 4gt6_A 273 PDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT------------Q------------- 324 (394)
T ss_dssp CTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC------------E-------------
T ss_pred ccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc------------E-------------
Confidence 76644 3778889999999999997 4566567778999999999988654 11 1
Q ss_pred eecccCCccCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCc
Q 048668 325 YLDLSNNLLNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNN 404 (725)
Q Consensus 325 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 404 (725)
....+|.++.+|+.+.+..+ ++.....+|.+|.+|+.+++.+|.... ..|..+.+|+.+.+..|.
T Consensus 325 -----------I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 325 -----------ILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp -----------ECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred -----------ehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 23356777788888888654 665667788888888888888876542 456777888888887765
Q ss_pred cc
Q 048668 405 FS 406 (725)
Q Consensus 405 l~ 406 (725)
+.
T Consensus 390 ~~ 391 (394)
T 4gt6_A 390 ID 391 (394)
T ss_dssp --
T ss_pred EE
Confidence 53
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=2.4e-13 Score=142.65 Aligned_cols=105 Identities=21% Similarity=0.220 Sum_probs=86.5
Q ss_pred cEEecCCC-ccCccCCccccCCCCCcEEEccC-CcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeecc
Q 048668 16 QALALAGN-YLTGKLPDFIGNLSALQVIHIKG-NSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLT 93 (725)
Q Consensus 16 ~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 93 (725)
..++++++ +|+ .+|. |..+++|++|+|++ |+|+++.+..|.++++|++|+|++|+|+++.|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45688887 887 5777 88888888888886 88888888888888888888888888888888888888888888888
Q ss_pred CCCCCCCCChhhhcCCCCccEEEccCceeee
Q 048668 94 SNRFSGSLPFDIVVNLPNLKELGIGANNFFG 124 (725)
Q Consensus 94 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~ 124 (725)
+|+|+ .+|...|..++ |+.|+|++|.+..
T Consensus 89 ~N~l~-~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALE-SLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCS-CCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccc-eeCHHHcccCC-ceEEEeeCCCccC
Confidence 88888 77777776665 8888888887764
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=2.8e-13 Score=142.16 Aligned_cols=131 Identities=20% Similarity=0.196 Sum_probs=106.0
Q ss_pred eecccCC-ccCCCcchhhhcCCCCCeEEccC-ccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCC
Q 048668 325 YLDLSNN-LLNGSLPQQVGNLKNLIILDISS-NQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSC 402 (725)
Q Consensus 325 ~L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 402 (725)
.++++++ .+++ +|. +..+++|+.|+|++ |.|++..+..|..+++|+.|+|++|+|+++.|..|+.+++|+.|||++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677887 7884 666 99999999999996 999988889999999999999999999999999999999999999999
Q ss_pred CcccccCcccccCCCCCCeEEcccccCeeecCCCCc--cCCCCCcCccCCccccCCCC
Q 048668 403 NNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPTKGV--FSNKSKIPLQGNVRLCGGID 458 (725)
Q Consensus 403 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~~~~~n~~~c~~~~ 458 (725)
|+|+++.+..|..++ |+.|+|++|+|.+.+..... +.......+..+...|..+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999988887888776 99999999999988763211 11112233444566776654
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.39 E-value=3.8e-15 Score=156.95 Aligned_cols=67 Identities=21% Similarity=0.174 Sum_probs=30.8
Q ss_pred cCccceecCCCccccccCccCcc-----cccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCccc
Q 048668 133 ASNLELLDLSNNQFKGKVSIDFS-----SLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFG 201 (725)
Q Consensus 133 l~~L~~L~Ls~N~i~~~~~~~f~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 201 (725)
+++|++|+|++|+|+......+. ..++|++|+|++|.++...... +...+...++|++|+|++|.|+
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~--l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAV--LMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHH--HHHHHHTCSSCCEEECTTSSCH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHH--HHHHHhcCCCcCEEeCCCCCCC
Confidence 34455555555555433322221 2244555555555554322110 1123345566666666666665
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=4.3e-15 Score=156.56 Aligned_cols=170 Identities=16% Similarity=0.146 Sum_probs=101.4
Q ss_pred CCCcEEEccCCcCCccCCCCCCC-----CCCCCEEEccCCcccccCcccc-cccCCCceeeccCCCCCCCCChhhh----
Q 048668 37 SALQVIHIKGNSLGGKFPTTLGL-----LRNLVQLNVAENKFYGMFPRSI-CNISSLEYFYLTSNRFSGSLPFDIV---- 106 (725)
Q Consensus 37 ~~L~~L~l~~n~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~---- 106 (725)
++|++|+|++|+++......|.. .++|++|+|++|.|+......+ ..+++|+.|+|++|.|+ ......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~-~~~~~~L~~~L 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG-PEACKDLRDLL 150 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC-HHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC-HHHHHHHHHHH
Confidence 56777777777776443333322 2577777777777764433333 34567777888888776 3222222
Q ss_pred -cCCCCccEEEccCceeeee----CCCcccccCccceecCCCccccccC----ccCcccccccCeeecCCccCCccCCCC
Q 048668 107 -VNLPNLKELGIGANNFFGL----IPDSLSNASNLELLDLSNNQFKGKV----SIDFSSLKILWRLNLEQNNLGIGAAND 177 (725)
Q Consensus 107 -~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~Ls~N~i~~~~----~~~f~~l~~L~~L~L~~N~l~~~~~~~ 177 (725)
...++|++|+|++|.|+.. .+..+..+++|++|||++|+|++.. ...+...++|++|+|++|.|+......
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2456777777777777642 2233456677778888888776543 234455567777777777776433211
Q ss_pred cccccccCCCCCCCEEECccCcccccCChhhh
Q 048668 178 LGFVTFLTNCSSLKVLSLSDNQFGGELPHSIA 209 (725)
Q Consensus 178 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 209 (725)
+...+...++|++|+|++|.|+......+.
T Consensus 231 --l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 231 --LARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp --HHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred --HHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 113344556777777777777654444443
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.32 E-value=7.3e-11 Score=125.29 Aligned_cols=147 Identities=13% Similarity=0.102 Sum_probs=66.3
Q ss_pred CChhhcCCCCccEEeccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCc
Q 048668 253 IPDVIGELKNLQLLGLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNL 332 (725)
Q Consensus 253 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~ 332 (725)
...++....+|+.+.+..+ +......+|.+...|+.+.+..+ ++ .+....+.....++.+.+..+
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~------------~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT------------SIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC------------EECTTTTTTCTTCCEEEECCC-
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc------------EeCccccceeehhcccccccc-
Confidence 3444555555665555443 22234444555555555555443 11 222222222211122222221
Q ss_pred cCCCcchhhhcCCCCCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCCEEeCCCCcccccCccc
Q 048668 333 LNGSLPQQVGNLKNLIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIKFLDVSCNNFSGQFPKF 412 (725)
Q Consensus 333 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 412 (725)
++......|.++.+|+.+.+.++.++.....+|.++.+|+.+.|..+ ++.+-..+|.++++|+.+.+..+ ++.+-..+
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~a 351 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGA 351 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhH
Confidence 22122334555555555555555555444455555555555555433 44344455555555555555433 44344444
Q ss_pred ccCC
Q 048668 413 LENL 416 (725)
Q Consensus 413 ~~~l 416 (725)
|.+.
T Consensus 352 F~~c 355 (379)
T 4h09_A 352 FEGS 355 (379)
T ss_dssp TTTS
T ss_pred hhCC
Confidence 4443
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.29 E-value=9.3e-12 Score=124.94 Aligned_cols=149 Identities=17% Similarity=0.149 Sum_probs=113.1
Q ss_pred HHHHHhcCCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCCC
Q 048668 526 ELSKATSEFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDFK 604 (725)
Q Consensus 526 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 604 (725)
.+......|+.....+.|+.+.||++... +..+++|+...........+.+|+++++.+. +..++++++++....
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~-- 83 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG-- 83 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--
Confidence 34455667888888888999999999753 6789999987532222346789999999885 677888998876543
Q ss_pred CcceeeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcC------------------------
Q 048668 605 GVDFKALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC------------------------ 660 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------------------------ 660 (725)
..|+||||++|.++.+..... .....++.+++++++.||+..
T Consensus 84 ---~~~lv~e~i~G~~l~~~~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (263)
T 3tm0_A 84 ---WSNLLMSEADGVLCSEEYEDE-----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNND 149 (263)
T ss_dssp ---EEEEEEECCSSEEHHHHCCTT-----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTT
T ss_pred ---ceEEEEEecCCeehhhccCCc-----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcc
Confidence 789999999999998763211 112467889999999999810
Q ss_pred --------------------------------CCCcEecCCCCCCeeecCCCceEEcccccccc
Q 048668 661 --------------------------------QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF 692 (725)
Q Consensus 661 --------------------------------~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~ 692 (725)
.+.++|+|++|.||+++.+..+.|+||+.|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 150 LADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998766678999998754
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.28 E-value=1.9e-10 Score=122.13 Aligned_cols=312 Identities=11% Similarity=0.072 Sum_probs=178.3
Q ss_pred ccCCCCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCCCCCCCChhhhcCCCCc
Q 048668 33 IGNLSALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNL 112 (725)
Q Consensus 33 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 112 (725)
+....+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++ .++..+|.+ .+|
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~-~~L 115 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQG-TDL 115 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTT-CCC
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-Eeccceecc-CCc
Confidence 44455666666653 355566666666666666666533 555666666665 4666655533 44 556566544 356
Q ss_pred cEEEccCceeeeeCCCcccccCccceecCCCccccccCccCcccccccCeeecCCccCCccCCCCcc------cccccCC
Q 048668 113 KELGIGANNFFGLIPDSLSNASNLELLDLSNNQFKGKVSIDFSSLKILWRLNLEQNNLGIGAANDLG------FVTFLTN 186 (725)
Q Consensus 113 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~------~~~~~~~ 186 (725)
+.+.+..+ ++.+...+|.+. +|+.+.+-. .++.+...+|.....++.+.+..+........... ....+..
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred ccccCCCc-cccccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 66666544 333444455443 455544433 34445556666666666665555443322110000 0011122
Q ss_pred CCCCCEEECccCcccccCChhhhhccccceeEEecCccceeccCcccccccCCceEEecccccCCCCChhhcCCCCccEE
Q 048668 187 CSSLKVLSLSDNQFGGELPHSIANLSSTMIVFLIGGNQISGTIPLGIRNLVNLIALAVEVNQLHGTIPDVIGELKNLQLL 266 (725)
Q Consensus 187 l~~L~~L~L~~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 266 (725)
...+..+.+..+. .......+....+|+.+.+..+ +..+...+|.++.+|+.+
T Consensus 193 ~~~~~~~~~~~~~--------------------------~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i 245 (379)
T 4h09_A 193 AKTGTEFTIPSTV--------------------------KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEI 245 (379)
T ss_dssp TCCCSEEECCTTC--------------------------CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEE
T ss_pred cccccccccccce--------------------------eEEeecccccccccceeeeccc-eeEEccccccCCccceEE
Confidence 2222222222211 1133344555566666666443 444556667777777777
Q ss_pred eccCcccccCCCCCCcCCCCCCEEeCCCCcCCCccccccccccccccccccccccccceecccCCccCCCcchhhhcCCC
Q 048668 267 GLYKNFLQGSIPSGLGNLTKLAKLDLGSNSLQGNFIASQNKLIGALPQQLLSITTLSLYLDLSNNLLNGSLPQQVGNLKN 346 (725)
Q Consensus 267 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~p~~~~~~~~ll~~L~L~~n~l~~~~~~~~~~l~~ 346 (725)
.+..+ ++.....+|.+..+|+.+.+..+ ++ .++...|..-..++.+.+.++.++......|.++.+
T Consensus 246 ~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~------------~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 246 AIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK------------TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp EECTT-CCEECTTTTTTCTTCCEEEECCC-CS------------EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred EcCCC-ccEeCccccceeehhcccccccc-ce------------eccccccccccccccccccccccceehhhhhcCCCC
Confidence 77665 44455556667777777776543 22 455555554444466777777676566678889999
Q ss_pred CCeEEccCccccccCccccccccCCcEEEccCCccccccCccccCCCCCC
Q 048668 347 LIILDISSNQFSGMIPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLKSIK 396 (725)
Q Consensus 347 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 396 (725)
|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++.+-..+|.++..++
T Consensus 312 L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~~~ 359 (379)
T 4h09_A 312 LSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSITK 359 (379)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSCCC
T ss_pred CCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCCCc
Confidence 999999755 66566788999999999999765 6666677888775443
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=2.4e-10 Score=114.40 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=96.7
Q ss_pred CCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--ccceeeEeecCCCCCcceee
Q 048668 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN--LIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 533 ~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~ 610 (725)
.+......+.|..+.||++.. .+|..+++|+.... ....+.+|+++++.+.+.+ +++++++.... +..+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~-----~~~~ 91 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEA-----GRDW 91 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----SCEE
T ss_pred CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC-----CCCE
Confidence 444433434566799999975 35677999987543 2245678999999886444 55677775543 3579
Q ss_pred EEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcC------------------------------
Q 048668 611 LVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC------------------------------ 660 (725)
Q Consensus 611 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------------------------------ 660 (725)
+||||++|.++. ... .. ...++.++++.++.+|+..
T Consensus 92 ~v~e~i~G~~l~--~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDD 157 (264)
T ss_dssp EEEECCSSEETT--TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTS
T ss_pred EEEEecCCcccC--cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchh
Confidence 999999998884 211 11 1246677778888888641
Q ss_pred -------------------------CCCcEecCCCCCCeeecCCCceEEccccccccc
Q 048668 661 -------------------------QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 661 -------------------------~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~ 693 (725)
.+.++|+|++|.||+++.++.++|+|||.|...
T Consensus 158 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 158 LDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp CCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred hhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 113999999999999988766789999998653
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=1.8e-09 Score=113.47 Aligned_cols=144 Identities=15% Similarity=0.201 Sum_probs=104.7
Q ss_pred CcccccccceEEEEEEECCCceEEEEEEee--ccc-cchHHHHHHHHHHHHcCC--CCcccceeeEeecCCCCCcceeeE
Q 048668 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVIN--LKQ-KGAFRSFVAECEALRNIR--HRNLIKIITICSSTDFKGVDFKAL 611 (725)
Q Consensus 537 ~~~ig~G~~g~V~~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~l 611 (725)
.+.++.|.++.||++... +..+++|+.. ... ......+.+|+++++.+. +..+++++.++..... .+..|+
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~--~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV--IGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT--TSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc--cCCeEE
Confidence 467899999999998864 4568888775 322 112346788999999997 4567888888765431 235789
Q ss_pred EEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------
Q 048668 612 VFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC------------------------------- 660 (725)
Q Consensus 612 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------------------------------- 660 (725)
||||++|..+.+... ..++..++..++.+++++|+.||...
T Consensus 119 vme~v~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (359)
T 3dxp_A 119 IMEFVSGRVLWDQSL--------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE 190 (359)
T ss_dssp EEECCCCBCCCCTTC--------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCeecCCCcc--------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcC
Confidence 999999977744211 13567788889999999999999731
Q ss_pred ------------------------CCCcEecCCCCCCeeecCCCc--eEEcccccccc
Q 048668 661 ------------------------QPPMVHGDLKPSNVLLDHDMV--AHVGDFGLAKF 692 (725)
Q Consensus 661 ------------------------~~~ivHrdlkp~Nill~~~~~--~kl~Dfgla~~ 692 (725)
.+.++|+|++|.||+++.++. +.|+||+.|..
T Consensus 191 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 191 TESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998874
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=2.7e-10 Score=118.80 Aligned_cols=185 Identities=15% Similarity=0.169 Sum_probs=92.0
Q ss_pred cccCcEEecCCCccCc-c-------CCccccCCCCCcEEEccCCcCCc---------cCCCCCCCCCCCCEEEccCCc-c
Q 048668 12 LFKLQALALAGNYLTG-K-------LPDFIGNLSALQVIHIKGNSLGG---------KFPTTLGLLRNLVQLNVAENK-F 73 (725)
Q Consensus 12 l~~l~~L~l~~n~l~~-~-------~~~~~~~l~~L~~L~l~~n~l~~---------~~~~~~~~l~~L~~L~Ls~N~-l 73 (725)
...++.|.+......+ . +.++...+++|+.|.+.++.... .+...+..+++|+.|+|++|. +
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3456777777655432 1 12234567788888876654311 122334556777777777663 2
Q ss_pred cccCcccccccCCCceeeccCCCCCCCCChhhh-cCCCCccEEEccC--ceeeee-----CCCcc--cccCccceecCCC
Q 048668 74 YGMFPRSICNISSLEYFYLTSNRFSGSLPFDIV-VNLPNLKELGIGA--NNFFGL-----IPDSL--SNASNLELLDLSN 143 (725)
Q Consensus 74 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~l~~L~~L~L~~--N~i~~~-----~~~~~--~~l~~L~~L~Ls~ 143 (725)
. .+. +. +++|+.|+|..+.++......+. ..+|+|+.|+|+. |...+- +...+ ..+++|++|+|++
T Consensus 186 ~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 186 S--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp B--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred e--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 2 222 32 66777777777666421111111 2567777777642 211100 00111 2356677777766
Q ss_pred ccccccCccCcc---cccccCeeecCCccCCccCCCCcccccccCCCCCCCEEECccCcccc
Q 048668 144 NQFKGKVSIDFS---SLKILWRLNLEQNNLGIGAANDLGFVTFLTNCSSLKVLSLSDNQFGG 202 (725)
Q Consensus 144 N~i~~~~~~~f~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 202 (725)
|.+.+.....+. .+++|++|+|+.|.++...... +...+.++++|+.|+|++|.|+.
T Consensus 262 ~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~--L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 262 AEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARL--LLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHH--HHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHH--HHhhcccCCcceEEECCCCcCCH
Confidence 666532222221 3556666666666655422110 11122345666666666666553
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=3.6e-10 Score=117.81 Aligned_cols=180 Identities=19% Similarity=0.215 Sum_probs=123.2
Q ss_pred ccccCcccCcEEecCCCccC---------ccCCccccCCCCCcEEEccCCc-CCccCCCCCCCCCCCCEEEccCCccccc
Q 048668 7 KEIGSLFKLQALALAGNYLT---------GKLPDFIGNLSALQVIHIKGNS-LGGKFPTTLGLLRNLVQLNVAENKFYGM 76 (725)
Q Consensus 7 ~~~~~l~~l~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 76 (725)
+.+..+++|++|.+.++... +.+...+..+++|+.|+|++|. +. .+. +. +++|++|+|..|.+...
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChH
Confidence 44566789999999765432 1244567889999999999984 32 333 43 78999999999998754
Q ss_pred Cccccc--ccCCCceeeccC--CCCCCC-----CChhhh--cCCCCccEEEccCceeeeeCCCcc---cccCccceecCC
Q 048668 77 FPRSIC--NISSLEYFYLTS--NRFSGS-----LPFDIV--VNLPNLKELGIGANNFFGLIPDSL---SNASNLELLDLS 142 (725)
Q Consensus 77 ~~~~~~--~l~~L~~L~L~~--N~l~~~-----~~~~~~--~~l~~L~~L~L~~N~i~~~~~~~~---~~l~~L~~L~Ls 142 (725)
....+. .+++|+.|+|+. |...+. +.. .+ ..+|+|++|+|.+|.+....+..+ ..+++|++|||+
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~-~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs 287 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP-LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDIS 287 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG-GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECC
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHH-HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECC
Confidence 444554 789999999964 221111 111 12 257999999999999874322222 257899999999
Q ss_pred CccccccCcc----CcccccccCeeecCCccCCccCCCCcccccccCC-CCCCCEEECccCc
Q 048668 143 NNQFKGKVSI----DFSSLKILWRLNLEQNNLGIGAANDLGFVTFLTN-CSSLKVLSLSDNQ 199 (725)
Q Consensus 143 ~N~i~~~~~~----~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~-l~~L~~L~L~~N~ 199 (725)
.|.|++.... .+..+++|+.|+|++|.++..... .+.. + ...+++++++
T Consensus 288 ~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~------~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 288 AGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKK------ELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHH------HHHHHC--CSEEECCSBC
T ss_pred CCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHH------HHHHHc--CCEEEecCCc
Confidence 9999874332 335679999999999998754321 1111 1 3457777776
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.62 E-value=5.1e-09 Score=103.32 Aligned_cols=81 Identities=21% Similarity=0.346 Sum_probs=39.0
Q ss_pred CCCCCCEEEccCCccccc--CcccccccCCCceeeccCCCCCCCCChhhhcCCCCccEEEccCceeeeeCC-------Cc
Q 048668 59 LLRNLVQLNVAENKFYGM--FPRSICNISSLEYFYLTSNRFSGSLPFDIVVNLPNLKELGIGANNFFGLIP-------DS 129 (725)
Q Consensus 59 ~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-------~~ 129 (725)
++++|++|+|++|+|+++ +|..+..+++|+.|+|++|+|++.-..+.+.++ +|++|+|++|.+++..| ..
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHHH
Confidence 345555555555555542 234445555555555555555521111222222 55555555555554332 12
Q ss_pred ccccCccceec
Q 048668 130 LSNASNLELLD 140 (725)
Q Consensus 130 ~~~l~~L~~L~ 140 (725)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 45566666654
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.58 E-value=1.3e-07 Score=96.76 Aligned_cols=140 Identities=18% Similarity=0.222 Sum_probs=97.8
Q ss_pred CcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCc--ccceeeEeecCCCCCcceeeEEE
Q 048668 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRN--LIKIITICSSTDFKGVDFKALVF 613 (725)
Q Consensus 537 ~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~~~~~~~~~lv~ 613 (725)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +++++.++.... .....|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~--~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE--TYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS--SCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--CCCcceEEE
Confidence 3568999999999863 34788886422 23467889999998884 333 345554432221 112458999
Q ss_pred eccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhc----------------------------------
Q 048668 614 EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH---------------------------------- 659 (725)
Q Consensus 614 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---------------------------------- 659 (725)
||++|..+.+.... .++..++..++.++++.++.+|+.
T Consensus 96 ~~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN--------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp ECCCCEECCHHHHH--------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred cccCCeECCccccc--------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 99999887653221 356667777888888888888861
Q ss_pred ---------------------CCCCcEecCCCCCCeeecC--CCceEEccccccccc
Q 048668 660 ---------------------CQPPMVHGDLKPSNVLLDH--DMVAHVGDFGLAKFL 693 (725)
Q Consensus 660 ---------------------~~~~ivHrdlkp~Nill~~--~~~~kl~Dfgla~~~ 693 (725)
..+.++|+|++|.||+++. +..+.|+||+.+...
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1235899999999999998 456889999988653
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.57 E-value=3.2e-07 Score=94.46 Aligned_cols=137 Identities=19% Similarity=0.192 Sum_probs=98.3
Q ss_pred CCCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCC----CcccceeeEeecCCCCCcce
Q 048668 533 EFSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRH----RNLIKIITICSSTDFKGVDF 608 (725)
Q Consensus 533 ~~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~~ 608 (725)
.....+.++.|....||+. +..+++|+.... .....+.+|.++++.+.+ ..+++++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 4556678999999999998 445788876422 223568899999988876 234555554 14
Q ss_pred eeEEEeccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcC----------------------------
Q 048668 609 KALVFEYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC---------------------------- 660 (725)
Q Consensus 609 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---------------------------- 660 (725)
.|+||||++|.++.+.... .++..+...++.++++.++.||+..
T Consensus 102 ~~lvme~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQYH--------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp SCEEEECCCCBCCCHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCccccccccc--------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 5899999999888643211 3455666677777888887777532
Q ss_pred --------------------------------CCCcEecCCCCCCeeecCCCceEEccccccccc
Q 048668 661 --------------------------------QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 661 --------------------------------~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~ 693 (725)
.+.++|+|++|.||+++.+..+.|+||+.|...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999999766799999998653
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=3.8e-08 Score=97.05 Aligned_cols=80 Identities=20% Similarity=0.303 Sum_probs=54.4
Q ss_pred hcCCCCCeEEccCcccccc--CccccccccCCcEEEccCCccccccCccccCCC--CCCEEeCCCCcccccCc-------
Q 048668 342 GNLKNLIILDISSNQFSGM--IPVTLSTCVSLEYVDISSNCFHGIIPPSLGFLK--SIKFLDVSCNNFSGQFP------- 410 (725)
Q Consensus 342 ~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p------- 410 (725)
..+++|+.|+|++|+|++. +|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 4577888888888888763 345666777888888888887754 2344444 77788888888776554
Q ss_pred ccccCCCCCCeEE
Q 048668 411 KFLENLSFLEFLN 423 (725)
Q Consensus 411 ~~~~~l~~L~~L~ 423 (725)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2355677777664
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=1.2e-08 Score=95.75 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=60.5
Q ss_pred CccccCCCCCcEEEccCC-cCCcc----CCCCCCCCCCCCEEEccCCccccc----CcccccccCCCceeeccCCCCCCC
Q 048668 30 PDFIGNLSALQVIHIKGN-SLGGK----FPTTLGLLRNLVQLNVAENKFYGM----FPRSICNISSLEYFYLTSNRFSGS 100 (725)
Q Consensus 30 ~~~~~~l~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 100 (725)
...+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|.+.
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345566677777777777 66532 233445556677777777776532 233444556677777777766521
Q ss_pred CC---hhhhcCCCCccEEEc--cCceeeee----CCCcccccCccceecCCCcccc
Q 048668 101 LP---FDIVVNLPNLKELGI--GANNFFGL----IPDSLSNASNLELLDLSNNQFK 147 (725)
Q Consensus 101 ~~---~~~~~~l~~L~~L~L--~~N~i~~~----~~~~~~~l~~L~~L~Ls~N~i~ 147 (725)
-- ...+...++|++|+| ++|.|... +...+...++|++|+|++|.|.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 10 111233344555555 44544321 1122333344555555555543
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=9.4e-09 Score=96.61 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=91.3
Q ss_pred ccccCcccCcEEecCCC-ccCcc----CCccccCCCCCcEEEccCCcCCcc----CCCCCCCCCCCCEEEccCCccccc-
Q 048668 7 KEIGSLFKLQALALAGN-YLTGK----LPDFIGNLSALQVIHIKGNSLGGK----FPTTLGLLRNLVQLNVAENKFYGM- 76 (725)
Q Consensus 7 ~~~~~l~~l~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~- 76 (725)
+.+...+.|++|+|++| .|... +.+.+...++|++|+|++|+|... +...+...++|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34566789999999999 88742 445677789999999999999742 344456678999999999999854
Q ss_pred ---CcccccccCCCceeec--cCCCCCCCCC---hhhhcCCCCccEEEccCceee
Q 048668 77 ---FPRSICNISSLEYFYL--TSNRFSGSLP---FDIVVNLPNLKELGIGANNFF 123 (725)
Q Consensus 77 ---~~~~~~~l~~L~~L~L--~~N~l~~~~~---~~~~~~l~~L~~L~L~~N~i~ 123 (725)
+..++...++|++|+| ++|.|..... ...+...++|++|+|++|.|.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4567788889999999 8899973211 123455689999999999985
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.41 E-value=1.5e-06 Score=88.78 Aligned_cols=138 Identities=16% Similarity=0.134 Sum_probs=91.0
Q ss_pred CcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCC---cccceeeEeecCCCCCcceeeEEE
Q 048668 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR---NLIKIITICSSTDFKGVDFKALVF 613 (725)
Q Consensus 537 ~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv~ 613 (725)
.+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+.+.++... .+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~----~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS----DGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT----TSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC----CCceEEEE
Confidence 356788888899987 3457788742 223346788999999999752 356666665421 23568999
Q ss_pred eccCCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhc----------------------------------
Q 048668 614 EYMGNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHH---------------------------------- 659 (725)
Q Consensus 614 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---------------------------------- 659 (725)
||++|..+.+.... .++..+...++.++++.++.||+.
T Consensus 93 e~i~G~~l~~~~~~--------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 93 RKVQGQILGEDGMA--------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp ECCCSEECHHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred eccCCeECchhhhh--------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 99999887653211 123333444444444444444432
Q ss_pred -----------------------CCCCcEecCCCCCCeeecC---CCc-eEEccccccccc
Q 048668 660 -----------------------CQPPMVHGDLKPSNVLLDH---DMV-AHVGDFGLAKFL 693 (725)
Q Consensus 660 -----------------------~~~~ivHrdlkp~Nill~~---~~~-~kl~Dfgla~~~ 693 (725)
..+.++|+|++|.||+++. ++. +.|+||+.+...
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2335799999999999997 455 589999988653
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.38 E-value=9.8e-07 Score=88.94 Aligned_cols=76 Identities=16% Similarity=0.100 Sum_probs=59.0
Q ss_pred CCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCC---cccceeeEeecCCCCCcceeeEE
Q 048668 536 SSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR---NLIKIITICSSTDFKGVDFKALV 612 (725)
Q Consensus 536 ~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv 612 (725)
..+.++.|.++.||+++.. +|+.+++|+...........|.+|++.++.+.+. .+++++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 3567999999999999875 6788999987543333346789999999999865 577877752 25899
Q ss_pred EeccCCCCH
Q 048668 613 FEYMGNGSL 621 (725)
Q Consensus 613 ~e~~~~g~L 621 (725)
|||++|+.+
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999864
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.36 E-value=1.7e-06 Score=86.62 Aligned_cols=136 Identities=17% Similarity=0.098 Sum_probs=95.2
Q ss_pred ccccccce-EEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCCCCcceeeEEEecc
Q 048668 539 MIGQGSFG-SVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDFKGVDFKALVFEYM 616 (725)
Q Consensus 539 ~ig~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 616 (725)
.+..|..| .||+......+..+++|+-... ....+.+|.+.|+.+. +--+.++++++...+ ..|+|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~-----~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD-----DAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT-----EEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC-----eEEEEEEee
Confidence 34445554 6899887767778889986533 3456788999998875 334677888766543 679999999
Q ss_pred CCCCHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 048668 617 GNGSLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHC------------------------------------ 660 (725)
Q Consensus 617 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------------------------------------ 660 (725)
+|.++.+...... .....++.+++..++-||...
T Consensus 103 ~G~~~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 103 PGKTAFQVLEEYP----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CSEEHHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred CCccccccccCCH----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9988876543221 112345556666666666421
Q ss_pred -------------------CCCcEecCCCCCCeeecCCCceEEcccccccc
Q 048668 661 -------------------QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF 692 (725)
Q Consensus 661 -------------------~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~ 692 (725)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12379999999999999887778999998864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.21 E-value=4.9e-06 Score=86.93 Aligned_cols=76 Identities=8% Similarity=0.079 Sum_probs=54.8
Q ss_pred CCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--ccceeeEeecCCCCCcceeeEEE
Q 048668 536 SSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN--LIKIITICSSTDFKGVDFKALVF 613 (725)
Q Consensus 536 ~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~lv~ 613 (725)
..+.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+.... ++++++++.... +..|+||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEE
Confidence 346688899999999875 4778889987432 35788999999887433 466776654432 3578999
Q ss_pred eccCCCCHH
Q 048668 614 EYMGNGSLE 622 (725)
Q Consensus 614 e~~~~g~L~ 622 (725)
||++|..+.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.09 E-value=5.3e-06 Score=86.78 Aligned_cols=83 Identities=8% Similarity=0.020 Sum_probs=54.4
Q ss_pred ccc-ccccceEEEEEEEC--C----CceEEEEEEeeccc---cchHHHHHHHHHHHHcCC-C--CcccceeeEeecCCCC
Q 048668 538 NMI-GQGSFGSVYKGILG--E----DEMIVAVKVINLKQ---KGAFRSFVAECEALRNIR-H--RNLIKIITICSSTDFK 604 (725)
Q Consensus 538 ~~i-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~ 604 (725)
+.| +.|....+|+.... . ++..+++|+..... ......+.+|+++++.+. + -.+.+++.++.....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 556 78888999988653 0 15678889865432 101245678888888875 3 356778877644321
Q ss_pred CcceeeEEEeccCCCCHH
Q 048668 605 GVDFKALVFEYMGNGSLE 622 (725)
Q Consensus 605 ~~~~~~lv~e~~~~g~L~ 622 (725)
.+..|+||||++|..+.
T Consensus 105 -~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 -LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp -TSSCEEEEECCCCBCCC
T ss_pred -cCCceEEEEecCCCChh
Confidence 13468999999986654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.04 E-value=1.2e-05 Score=85.52 Aligned_cols=76 Identities=17% Similarity=0.117 Sum_probs=49.0
Q ss_pred CcccccccceEEEEEEECCCceEEEEEEeecccc-------chHHHHHHHHHHHHcCCC--C-cccceeeEeecCCCCCc
Q 048668 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-------GAFRSFVAECEALRNIRH--R-NLIKIITICSSTDFKGV 606 (725)
Q Consensus 537 ~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~~ 606 (725)
.+.+|.|.++.||++....+++.|+||....... ....++..|+++++.+.. | .+++++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~----- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--T----- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--T-----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--C-----
Confidence 4578999999999997665677899998653211 123456789999887742 3 345666542 1
Q ss_pred ceeeEEEeccCCC
Q 048668 607 DFKALVFEYMGNG 619 (725)
Q Consensus 607 ~~~~lv~e~~~~g 619 (725)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 1357999999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.99 E-value=1.3e-06 Score=79.77 Aligned_cols=84 Identities=11% Similarity=0.028 Sum_probs=55.9
Q ss_pred CCCcEEEccCCcCCccCCCCCCCCCCCCEEEccCCc-ccccCccccccc----CCCceeeccCCC-CCCCCChhhhcCCC
Q 048668 37 SALQVIHIKGNSLGGKFPTTLGLLRNLVQLNVAENK-FYGMFPRSICNI----SSLEYFYLTSNR-FSGSLPFDIVVNLP 110 (725)
Q Consensus 37 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~~l~ 110 (725)
.+|+.||+++|.++..--..+.++++|++|+|++|. |+...-..+..+ ++|++|+|++|. || .-.-..+..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT-D~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT-DKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC-HHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC-HHHHHHHhcCC
Confidence 367888888887765555556777888888888874 665444455553 368888888774 66 32223345678
Q ss_pred CccEEEccCce
Q 048668 111 NLKELGIGANN 121 (725)
Q Consensus 111 ~L~~L~L~~N~ 121 (725)
+|+.|+|++|.
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 88888887774
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.94 E-value=3.1e-06 Score=77.20 Aligned_cols=93 Identities=15% Similarity=0.061 Sum_probs=63.2
Q ss_pred CCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCCC-CCCCCChhhhcCC----CCccEEEccCce-eeeeCC
Q 048668 54 PTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSNR-FSGSLPFDIVVNL----PNLKELGIGANN-FFGLIP 127 (725)
Q Consensus 54 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~l----~~L~~L~L~~N~-i~~~~~ 127 (725)
|..+..-.+|++|||+++.|+...-..+.++++|+.|+|++|. |+ .-.-..+..+ ++|++|+|++|. ||..--
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It-D~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE-DGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC-HHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC-HHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 4433333468888888888877666677888888888888884 65 2222223343 368888888874 764433
Q ss_pred CcccccCccceecCCCcc-cc
Q 048668 128 DSLSNASNLELLDLSNNQ-FK 147 (725)
Q Consensus 128 ~~~~~l~~L~~L~Ls~N~-i~ 147 (725)
..+..+++|++|+|+++. |+
T Consensus 133 ~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HHGGGCTTCCEEEEESCTTCC
T ss_pred HHHhcCCCCCEEECCCCCCCC
Confidence 456778888888888875 54
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.62 E-value=0.00046 Score=71.34 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=34.5
Q ss_pred HHHHHHHHHh----------cCCCCcEecCCCCCCeeecCCCceEEcccccccc
Q 048668 649 VASAIEYLHH----------HCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF 692 (725)
Q Consensus 649 i~~~l~~lH~----------~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~ 692 (725)
+..++++++. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 4456666663 1245899999999999998888999999998754
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.60 E-value=0.00027 Score=71.58 Aligned_cols=141 Identities=18% Similarity=0.164 Sum_probs=88.9
Q ss_pred CcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCC---CCcccceeeEeecCCCCCcceeeEEE
Q 048668 537 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIR---HRNLIKIITICSSTDFKGVDFKALVF 613 (725)
Q Consensus 537 ~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~~~lv~ 613 (725)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.|+.+. ...+++++.++... +..|+||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-----g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-----GHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-----SEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-----CceEEEE
Confidence 45688999999999875 4567888987533 3467889999998884 35678888876543 3689999
Q ss_pred eccCCCCHH--------H---HhcccCC---ccc-------------cccCCHHHHH---HHHH----------------
Q 048668 614 EYMGNGSLE--------D---WLHQSND---QVE-------------VCKLSLIQRL---NIAI---------------- 647 (725)
Q Consensus 614 e~~~~g~L~--------~---~l~~~~~---~~~-------------~~~~~~~~~~---~i~~---------------- 647 (725)
||++|..+. + .++.... ..- ...-+|.... ++..
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 999987541 1 1222211 000 0011343221 1111
Q ss_pred HHHHH-HHHHHh-cCCCCcEecCCCCCCeeecCCCceEEcccc
Q 048668 648 DVASA-IEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVGDFG 688 (725)
Q Consensus 648 ~i~~~-l~~lH~-~~~~~ivHrdlkp~Nill~~~~~~kl~Dfg 688 (725)
.++.. ...+.. ...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 123321 2256899999999999999887 8999984
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.53 E-value=0.00033 Score=70.53 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=55.1
Q ss_pred CCCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCC---CcccceeeEeecCCCCCcceee
Q 048668 534 FSSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRH---RNLIKIITICSSTDFKGVDFKA 610 (725)
Q Consensus 534 ~~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~~~~~~ 610 (725)
....+.+|.|..+.||+.+.. +|+.|.+|+...........|..|++.|+.+.- --+++++++. ..+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~~ 86 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRT 86 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTE
T ss_pred eEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cce
Confidence 344567899999999999875 788899998764443334567899999998842 2345555541 247
Q ss_pred EEEeccCCCC
Q 048668 611 LVFEYMGNGS 620 (725)
Q Consensus 611 lv~e~~~~g~ 620 (725)
+||||++++.
T Consensus 87 lv~e~l~~~~ 96 (288)
T 3f7w_A 87 LAMEWVDERP 96 (288)
T ss_dssp EEEECCCCCC
T ss_pred EEEEeecccC
Confidence 8999998764
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.46 E-value=0.00015 Score=62.94 Aligned_cols=62 Identities=19% Similarity=0.233 Sum_probs=48.5
Q ss_pred cEEEccCCccc-cccCccccCCCCCCEEeCCCCcccccCcccccCCCCCCeEEcccccCeeecCC
Q 048668 372 EYVDISSNCFH-GIIPPSLGFLKSIKFLDVSCNNFSGQFPKFLENLSFLEFLNLSYNHLEGEVPT 435 (725)
Q Consensus 372 ~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 435 (725)
..++.+++.|+ ..+|..+. ++|+.|||++|+|+.+.+..|..+++|++|+|++|+|.+.+..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc
Confidence 47888888886 23454332 4688999999999988888889999999999999999877653
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.43 E-value=0.00038 Score=74.25 Aligned_cols=32 Identities=25% Similarity=0.448 Sum_probs=27.8
Q ss_pred CCCcEecCCCCCCeeecCCCceEEccccccccc
Q 048668 661 QPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 661 ~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~ 693 (725)
.+.++|+|++|.||+++.++ ++++||+.+...
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 44899999999999998876 999999988653
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.33 E-value=3.2e-05 Score=71.88 Aligned_cols=19 Identities=16% Similarity=0.057 Sum_probs=11.2
Q ss_pred cccccCCCceeeccCC-CCC
Q 048668 80 SICNISSLEYFYLTSN-RFS 98 (725)
Q Consensus 80 ~~~~l~~L~~L~L~~N-~l~ 98 (725)
.+.+-+.|++|+|++| .|.
T Consensus 36 ll~~n~~L~~L~L~~nn~ig 55 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVS 55 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSC
T ss_pred HHhcCCCccEEECCCCCCCC
Confidence 3444556777777764 554
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.25 E-value=0.00016 Score=67.28 Aligned_cols=117 Identities=10% Similarity=0.081 Sum_probs=71.5
Q ss_pred ccccCCCCCcEEEccCC-cCCc----cCCCCCCCCCCCCEEEccCCccccc----CcccccccCCCceeeccCCCCCCCC
Q 048668 31 DFIGNLSALQVIHIKGN-SLGG----KFPTTLGLLRNLVQLNVAENKFYGM----FPRSICNISSLEYFYLTSNRFSGSL 101 (725)
Q Consensus 31 ~~~~~l~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~ 101 (725)
..+.+-+.|+.|+|++| +|.. .+-+++..-+.|+.|+|++|+|... +-.++..-+.|+.|+|++|.|.+..
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34455667777777775 6642 1234455567788888888877633 2344556677888888888876211
Q ss_pred Ch---hhhcCCCCccEEEccCce---eee----eCCCcccccCccceecCCCcccc
Q 048668 102 PF---DIVVNLPNLKELGIGANN---FFG----LIPDSLSNASNLELLDLSNNQFK 147 (725)
Q Consensus 102 ~~---~~~~~l~~L~~L~L~~N~---i~~----~~~~~~~~l~~L~~L~Ls~N~i~ 147 (725)
-. .++..-+.|++|+|++|. +.. .+...+..-+.|++|+++.|.+.
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 11 123344568888887553 321 12345667788899999887764
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.19 E-value=0.00058 Score=59.25 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=14.9
Q ss_pred CCEEEccCCcccccCcccccccCCCceeeccCCCC
Q 048668 63 LVQLNVAENKFYGMFPRSICNISSLEYFYLTSNRF 97 (725)
Q Consensus 63 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 97 (725)
|++|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433334444444444444444433
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.14 E-value=0.0013 Score=66.50 Aligned_cols=73 Identities=11% Similarity=0.134 Sum_probs=43.8
Q ss_pred CCCcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcc-cceeeEeecCCCCCcceeeEEE
Q 048668 535 SSSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL-IKIITICSSTDFKGVDFKALVF 613 (725)
Q Consensus 535 ~~~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~ 613 (725)
...+.++.|....+|++ ..+++|+........ ....+|+++++.+....+ .+++++... .-++|+
T Consensus 21 ~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~~-------~~~~v~ 86 (301)
T 3dxq_A 21 TGPLERLGGLTNLVFRA------GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDPA-------TGVMVT 86 (301)
T ss_dssp CSCEEEESCSSEEEEEE------TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECTT-------TCCEEE
T ss_pred cceeEcCCcccccccee------eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEECC-------CCEEEE
Confidence 33677888999999998 347888875432111 122467777777642222 566654221 246899
Q ss_pred ecc-CCCCH
Q 048668 614 EYM-GNGSL 621 (725)
Q Consensus 614 e~~-~~g~L 621 (725)
||+ +|.++
T Consensus 87 e~i~~g~~l 95 (301)
T 3dxq_A 87 RYIAGAQTM 95 (301)
T ss_dssp ECCTTCEEC
T ss_pred eecCCCccC
Confidence 999 65433
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.75 E-value=0.0085 Score=61.26 Aligned_cols=166 Identities=16% Similarity=0.126 Sum_probs=87.3
Q ss_pred CccCHHHHHHHhcCCCC-----CcccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCC--ccc
Q 048668 520 PMVSYAELSKATSEFSS-----SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR--NLI 592 (725)
Q Consensus 520 ~~~~~~~~~~~~~~~~~-----~~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv 592 (725)
...+.+.+......|.. ...++ |....||+.... +|+.+++|+...... ....+..|.++++.+... .++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeec
Confidence 33445555544444432 23466 778899987653 456788999864321 235667788888877522 244
Q ss_pred ceeeEeecCC--CCCcceeeEEEeccCCCCHH-----HH---------hccc---CCccccccCCHHHH----H------
Q 048668 593 KIITICSSTD--FKGVDFKALVFEYMGNGSLE-----DW---------LHQS---NDQVEVCKLSLIQR----L------ 643 (725)
Q Consensus 593 ~l~~~~~~~~--~~~~~~~~lv~e~~~~g~L~-----~~---------l~~~---~~~~~~~~~~~~~~----~------ 643 (725)
+++.. .+. ....+..++||||++|..+. ++ ++.. ..........+... .
T Consensus 86 ~~~~~--~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (328)
T 1zyl_A 86 APVAF--NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDA 163 (328)
T ss_dssp CCCCB--TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTC
T ss_pred ceeec--CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhc
Confidence 44433 111 01123567899999875321 11 1110 00000001111110 0
Q ss_pred ---------HHHHHHHHHHHHHHhc----CCCCcEecCCCCCCeeecCCCceEEcccccccc
Q 048668 644 ---------NIAIDVASAIEYLHHH----CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF 692 (725)
Q Consensus 644 ---------~i~~~i~~~l~~lH~~----~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~ 692 (725)
.+...+...++.+... ..+.++|+|+++.||+++ + .+.++||+.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 164 TLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 0111112223333321 234689999999999999 4 899999987754
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.73 E-value=0.01 Score=60.82 Aligned_cols=32 Identities=31% Similarity=0.316 Sum_probs=27.7
Q ss_pred CCCcEecCCCCCCeeecCC----CceEEcccccccc
Q 048668 661 QPPMVHGDLKPSNVLLDHD----MVAHVGDFGLAKF 692 (725)
Q Consensus 661 ~~~ivHrdlkp~Nill~~~----~~~kl~Dfgla~~ 692 (725)
.+.++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999875 6799999998864
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.71 E-value=0.0048 Score=66.01 Aligned_cols=73 Identities=14% Similarity=0.102 Sum_probs=46.5
Q ss_pred cccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCcc-cceeeEeecCCCCCcceeeEEEecc
Q 048668 538 NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL-IKIITICSSTDFKGVDFKALVFEYM 616 (725)
Q Consensus 538 ~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e~~ 616 (725)
+.|+.|-...+|++....++..|++|+......... ...+|..+++.+...++ +++++++. + ..||||+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~-------G~v~e~I 183 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFT--N-------GRIEEFM 183 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T-------EEEEECC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C-------eEEEEee
Confidence 567778889999998864457788998743321111 12478888988864444 56776641 1 2599999
Q ss_pred CCCC
Q 048668 617 GNGS 620 (725)
Q Consensus 617 ~~g~ 620 (725)
+|..
T Consensus 184 ~G~~ 187 (458)
T 2qg7_A 184 DGYA 187 (458)
T ss_dssp CSEE
T ss_pred CCcc
Confidence 8744
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.71 E-value=0.0033 Score=66.96 Aligned_cols=72 Identities=21% Similarity=0.164 Sum_probs=48.0
Q ss_pred cccccccceEEEEEEECC-------CceEEEEEEeeccccchHHHHHHHHHHHHcCCCCc-ccceeeEeecCCCCCccee
Q 048668 538 NMIGQGSFGSVYKGILGE-------DEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN-LIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 538 ~~ig~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~~ 609 (725)
+.|+.|....||++.... ++..|++|+.... .....+.+|..+++.+...+ .+++++++. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~------- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G------- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T-------
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C-------
Confidence 467778889999998753 2567889987432 11245668999988885333 366666532 1
Q ss_pred eEEEeccCCCC
Q 048668 610 ALVFEYMGNGS 620 (725)
Q Consensus 610 ~lv~e~~~~g~ 620 (725)
.+||||++|..
T Consensus 148 g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 GRLEEYIPSRP 158 (429)
T ss_dssp EEEECCCCEEE
T ss_pred CEEEEEeCCcc
Confidence 37999998743
No 440
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.64 E-value=0.021 Score=58.11 Aligned_cols=168 Identities=13% Similarity=0.115 Sum_probs=86.9
Q ss_pred ccCHHHHHHHhcCCCCC-----cccccccceEEEEEEECCCceEEEEEEeeccccchHHHHHHHHHHHHcCCCCc--ccc
Q 048668 521 MVSYAELSKATSEFSSS-----NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN--LIK 593 (725)
Q Consensus 521 ~~~~~~~~~~~~~~~~~-----~~ig~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 593 (725)
.++.+++......|... +.++.|....+|+.... ++ .+++|+..... ....+..|+++++.+.... +++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 34556666665666542 34666888899998764 33 57889886521 1234556777777664222 334
Q ss_pred eeeEeecCCC-CCcceeeEEEeccCCCCHHH--------------HhcccCCc-ccc--ccC---CHHHHHH--------
Q 048668 594 IITICSSTDF-KGVDFKALVFEYMGNGSLED--------------WLHQSNDQ-VEV--CKL---SLIQRLN-------- 644 (725)
Q Consensus 594 l~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~--------------~l~~~~~~-~~~--~~~---~~~~~~~-------- 644 (725)
++.......+ ...+..++||+|++|..+.. .++..... ... ... .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 4321100000 01135689999998864311 01111000 000 000 1111000
Q ss_pred ----HHHHHHHHHHHHHhc----CCCCcEecCCCCCCeeecCCCceEEcccccccc
Q 048668 645 ----IAIDVASAIEYLHHH----CQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF 692 (725)
Q Consensus 645 ----i~~~i~~~l~~lH~~----~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~ 692 (725)
+...+...+++++.. ....++|+|+.+.||+++.++.+.++||+.+..
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455566532 134799999999999999876668999988754
No 441
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.63 E-value=0.0048 Score=64.21 Aligned_cols=145 Identities=12% Similarity=0.125 Sum_probs=81.3
Q ss_pred cccccccceEEEEEEECC-------CceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCCCCccee
Q 048668 538 NMIGQGSFGSVYKGILGE-------DEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 538 ~~ig~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 609 (725)
+.+..|....+|++.... +++.|++|+.... ......+.+|.++++.+. +.-..++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~------- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E------- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T-------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C-------
Confidence 456668888999998742 3467889986332 123455668999998875 333466666532 1
Q ss_pred eEEEeccCCCCHHH--------------H---hcccCCccccccC-CHHHHHHHHHHHHH-------------------H
Q 048668 610 ALVFEYMGNGSLED--------------W---LHQSNDQVEVCKL-SLIQRLNIAIDVAS-------------------A 652 (725)
Q Consensus 610 ~lv~e~~~~g~L~~--------------~---l~~~~~~~~~~~~-~~~~~~~i~~~i~~-------------------~ 652 (725)
.+||||++|..+.. . ++........... -+.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 28999999854421 1 1111100000011 13344444433321 2
Q ss_pred HHHHHh----c-CCCCcEecCCCCCCeeecCC----CceEEcccccccc
Q 048668 653 IEYLHH----H-CQPPMVHGDLKPSNVLLDHD----MVAHVGDFGLAKF 692 (725)
Q Consensus 653 l~~lH~----~-~~~~ivHrdlkp~Nill~~~----~~~kl~Dfgla~~ 692 (725)
++++.. . ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 333322 1 23468999999999999876 7899999998864
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.16 E-value=0.013 Score=61.01 Aligned_cols=73 Identities=11% Similarity=0.163 Sum_probs=42.7
Q ss_pred cccccccceEEEEEEECCC--------ceEEEEEEeeccccchHHHHHHHHHHHHcCCCCc-ccceeeEeecCCCCCcce
Q 048668 538 NMIGQGSFGSVYKGILGED--------EMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN-LIKIITICSSTDFKGVDF 608 (725)
Q Consensus 538 ~~ig~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~ 608 (725)
+.++.|....+|++..... +..+++|+....... ......|.++++.+.... ++++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~------- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N------- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T-------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C-------
Confidence 4577788889999987531 257888887543221 112357888888775323 45666542 1
Q ss_pred eeEEEeccCCCC
Q 048668 609 KALVFEYMGNGS 620 (725)
Q Consensus 609 ~~lv~e~~~~g~ 620 (725)
-++||||++|..
T Consensus 109 ~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 GGRIEEWLYGDP 120 (369)
T ss_dssp TEEEEECCCSEE
T ss_pred CcEEEEEecCCc
Confidence 258999998753
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.79 E-value=0.022 Score=58.53 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=27.8
Q ss_pred CCcEecCCCCCCeeecCCCceEEcccccccc
Q 048668 662 PPMVHGDLKPSNVLLDHDMVAHVGDFGLAKF 692 (725)
Q Consensus 662 ~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~ 692 (725)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.08 E-value=0.046 Score=57.00 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=27.2
Q ss_pred CCcEecCCCCCCeeecCC------CceEEcccccccc
Q 048668 662 PPMVHGDLKPSNVLLDHD------MVAHVGDFGLAKF 692 (725)
Q Consensus 662 ~~ivHrdlkp~Nill~~~------~~~kl~Dfgla~~ 692 (725)
..++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 368999999999999887 7899999988764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.20 E-value=0.067 Score=56.38 Aligned_cols=73 Identities=10% Similarity=0.048 Sum_probs=46.1
Q ss_pred cccccccceEEEEEEECCC-------ceEEEEEEeeccccchHHHHHHHHHHHHcCC-CCcccceeeEeecCCCCCccee
Q 048668 538 NMIGQGSFGSVYKGILGED-------EMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSTDFKGVDFK 609 (725)
Q Consensus 538 ~~ig~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 609 (725)
+.+..|....+|++..... ++.|++|+........ -...+|.++++.+. +.-.+++++.+ .-
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~---------~~ 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF---------PE 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE---------TT
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc---------CC
Confidence 4566688889999987521 5678888864332111 12357888888775 33345666532 12
Q ss_pred eEEEeccCCCC
Q 048668 610 ALVFEYMGNGS 620 (725)
Q Consensus 610 ~lv~e~~~~g~ 620 (725)
+.||||++|..
T Consensus 146 ~~I~efI~G~~ 156 (424)
T 3mes_A 146 GRIEEFIDGEP 156 (424)
T ss_dssp EEEEECCCSEE
T ss_pred CEEEEEeCCcc
Confidence 68999999865
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.01 E-value=0.45 Score=49.83 Aligned_cols=29 Identities=24% Similarity=0.440 Sum_probs=24.6
Q ss_pred cEecCCCCCCeee------cCCCceEEcccccccc
Q 048668 664 MVHGDLKPSNVLL------DHDMVAHVGDFGLAKF 692 (725)
Q Consensus 664 ivHrdlkp~Nill------~~~~~~kl~Dfgla~~ 692 (725)
++|+|+.+.||++ +.+..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4456799999988864
No 447
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.55 E-value=0.1 Score=55.91 Aligned_cols=62 Identities=13% Similarity=0.074 Sum_probs=18.0
Q ss_pred CCcccccccceEEEEEEECCCceEEEE------EEeeccc--cchHHHHHHHHHHHHcCCCCcccceeeEeec
Q 048668 536 SSNMIGQGSFGSVYKGILGEDEMIVAV------KVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSS 600 (725)
Q Consensus 536 ~~~~ig~G~~g~V~~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 600 (725)
..+.+| ||.||+|.+.....+||| |...... ......|.+|..+++..+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345566 999999998755567888 6654321 2234578899999999999999999887543
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.39 E-value=3.3 Score=38.44 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=45.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEccccccccc
Q 048668 636 KLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 636 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~ 693 (725)
..+...+++++.+|+...++++.. +|--+.|+||+++.++.+++.-.|+...+
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTB
T ss_pred hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCC
Confidence 477888999999999988776644 78889999999999999999999986544
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=76.17 E-value=3.2 Score=38.67 Aligned_cols=53 Identities=19% Similarity=0.278 Sum_probs=43.6
Q ss_pred cCCHHHHHHHHHHHHHHHH-HHHhcCCCCcEecCCCCCCeeecCCCceEEccccccccc
Q 048668 636 KLSLIQRLNIAIDVASAIE-YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 693 (725)
Q Consensus 636 ~~~~~~~~~i~~~i~~~l~-~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~Dfgla~~~ 693 (725)
..+...+++++..|+.... +++. -+|--+.|+||++|.++.+++.-.|+-..+
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTTB
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCcccC
Confidence 4678889999988888777 6654 377889999999999999999999985444
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=68.90 E-value=7.2 Score=31.25 Aligned_cols=12 Identities=0% Similarity=0.030 Sum_probs=4.3
Q ss_pred ccccCCCceeec
Q 048668 81 ICNISSLEYFYL 92 (725)
Q Consensus 81 ~~~l~~L~~L~L 92 (725)
|.++++|+.+.|
T Consensus 16 F~~c~~L~~i~i 27 (100)
T 2lz0_A 16 FAGNTVIREITV 27 (100)
T ss_dssp TTTCTTCCCEEE
T ss_pred hcCCCCCcEEEc
Confidence 333333333333
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=67.23 E-value=2.3 Score=27.99 Aligned_cols=9 Identities=22% Similarity=0.431 Sum_probs=3.9
Q ss_pred HHhhhhccc
Q 048668 497 IVYARRRRS 505 (725)
Q Consensus 497 ~~~~~rr~~ 505 (725)
.+|.+||+.
T Consensus 32 ~~~~RRR~~ 40 (44)
T 2jwa_A 32 GILIKRRQQ 40 (44)
T ss_dssp HHHHHHHCS
T ss_pred Hhheehhhh
Confidence 444444443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=65.89 E-value=11 Score=30.19 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=32.0
Q ss_pred CCcCCccCCCCCCCCCCCCEEEccCCcccccCcccccccCCCceeeccCC
Q 048668 46 GNSLGGKFPTTLGLLRNLVQLNVAENKFYGMFPRSICNISSLEYFYLTSN 95 (725)
Q Consensus 46 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 95 (725)
+..++.+...+|.++.+|+.+.|-.+ ++.+...+|.++.+|+.+.+.+.
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34555566677777777777777644 44466667777777777777654
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=49.53 E-value=18 Score=23.82 Aligned_cols=6 Identities=67% Similarity=1.298 Sum_probs=2.3
Q ss_pred Hhhhhc
Q 048668 498 VYARRR 503 (725)
Q Consensus 498 ~~~~rr 503 (725)
++.++|
T Consensus 32 ~~~RRR 37 (44)
T 2l2t_A 32 VYVRRK 37 (44)
T ss_dssp HHHHTT
T ss_pred HHhhhh
Confidence 333333
No 454
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=25.60 E-value=1.1e+02 Score=28.43 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=44.5
Q ss_pred CHHHHhcccCCccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeecCCCceEEcc
Q 048668 620 SLEDWLHQSNDQVEVCKLSLIQRLNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVGD 686 (725)
Q Consensus 620 ~L~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivHrdlkp~Nill~~~~~~kl~D 686 (725)
+|.++|+.... ++++.++|.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|...+
T Consensus 34 SL~eIL~~~~~-----PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~ 93 (229)
T 2yle_A 34 SLEEILRLYNQ-----PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP 93 (229)
T ss_dssp EHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC
T ss_pred cHHHHHHHcCC-----CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc
Confidence 79999987654 79999999999999999877622100 1 1222456899999999988774
Done!