Your job contains 1 sequence.
>048669
MGSSVFIGPEESKRTSKLGPTGEKSLFTISALPHKKMEFLVLLDNPSSYRTTSNDSPDGH
GSNNERDRKRRRVSQSKTFKVEISVAAKIPLQAIAAALHGQESQNSREAFRVLDIILRQH
AAKHMIDHRSISIFLATSYRGCFLVRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGG
LSLNIGVKDRNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSL
LSLQRYTKALTVFQRSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCG
ISINSRFAQVEGRILSAPRIFVPAAKIDHWAVANFSGGCDIRSLCRDLIRFGEMKRISTS
PPLNVFEENPQFRRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTL
SEFGIFNQCLAPTKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMD
VSHGSPGHSNVPSVAAVVSSRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVR
ELLVDFYKSSGQTKPSQIIIFRSTLTWR
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048669
(568 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059258 - symbol:AGO4 "ARGONAUTE 4" species:37... 953 8.5e-134 2
TAIR|locus:2179008 - symbol:AGO9 "ARGONAUTE 9" species:37... 963 4.0e-123 2
TAIR|locus:2147072 - symbol:AT5G21030 species:3702 "Arabi... 901 8.1e-108 2
TAIR|locus:2059370 - symbol:AGO6 "ARGONAUTE 6" species:37... 834 1.0e-107 3
UNIPROTKB|Q69VD5 - symbol:PHN1 "Protein argonaute PNH1" s... 340 9.5e-46 5
TAIR|locus:2170897 - symbol:AGO10 "ARGONAUTE 10" species:... 329 2.7e-45 5
UNIPROTKB|Q851R2 - symbol:MEL1 "Protein argonaute MEL1" s... 315 3.0e-42 5
TAIR|locus:2057851 - symbol:AGO5 "ARGONAUTE 5" species:37... 367 3.7e-36 3
ZFIN|ZDB-GENE-030131-5357 - symbol:ago4 "argonaute RISC c... 228 6.3e-29 3
UNIPROTKB|F1LUQ5 - symbol:Eif2c4 "Protein Eif2c4" species... 329 2.3e-28 3
UNIPROTKB|F1PGN2 - symbol:EIF2C4 "Uncharacterized protein... 324 2.8e-28 2
WB|WBGene00000105 - symbol:alg-1 species:6239 "Caenorhabd... 335 3.2e-28 2
UNIPROTKB|Q9HCK5 - symbol:EIF2C4 "Protein argonaute-4" sp... 324 3.9e-28 2
UNIPROTKB|F1SV64 - symbol:EIF2C4 "Uncharacterized protein... 324 3.9e-28 2
UNIPROTKB|E1C5I5 - symbol:EIF2C4 "Protein argonaute-4" sp... 320 1.1e-27 3
UNIPROTKB|Q5ZMW0 - symbol:EIF2C4 "Protein argonaute-4" sp... 320 1.1e-27 3
UNIPROTKB|Q4KLV6 - symbol:eif2c4 "Protein argonaute-4" sp... 321 1.3e-27 3
UNIPROTKB|F1P3Z1 - symbol:EIF2C4 "Protein argonaute-4" sp... 320 1.7e-27 3
UNIPROTKB|F1MXK6 - symbol:EIF2C4 "Uncharacterized protein... 315 4.3e-27 2
WB|WBGene00000106 - symbol:alg-2 species:6239 "Caenorhabd... 323 4.4e-27 2
MGI|MGI:1924100 - symbol:Ago4 "argonaute RISC catalytic s... 315 4.6e-27 2
UNIPROTKB|F1P3Z0 - symbol:EIF2C3 "Protein argonaute-3" sp... 319 6.4e-27 2
UNIPROTKB|F1RSJ1 - symbol:EIF2C2 "Uncharacterized protein... 318 6.7e-27 2
UNIPROTKB|F1NL39 - symbol:LOC100858102 "Uncharacterized p... 319 7.8e-27 3
UNIPROTKB|Q5TA58 - symbol:EIF2C1 "Protein argonaute-1" sp... 306 1.0e-26 3
UNIPROTKB|Q5ZLG4 - symbol:EIF2C3 "Protein argonaute-3" sp... 317 1.1e-26 2
UNIPROTKB|Q6T5B7 - symbol:EIF2C3 "Protein argonaute-3" sp... 317 1.1e-26 2
ZFIN|ZDB-GENE-060503-452 - symbol:ago3b "argonaute RISC c... 213 1.5e-26 4
UNIPROTKB|F1P3Y9 - symbol:EIF2C1 "Uncharacterized protein... 306 1.7e-26 3
UNIPROTKB|F1PGP5 - symbol:EIF2C1 "Uncharacterized protein... 306 1.7e-26 3
UNIPROTKB|Q9UL18 - symbol:EIF2C1 "Protein argonaute-1" sp... 306 1.7e-26 3
UNIPROTKB|F1SV63 - symbol:EIF2C1 "Uncharacterized protein... 306 1.7e-26 3
MGI|MGI:2446630 - symbol:Ago1 "argonaute RISC catalytic s... 306 1.7e-26 3
RGD|1304619 - symbol:Ago1 "argonaute RISC catalytic compo... 306 1.7e-26 3
UNIPROTKB|F1MXX2 - symbol:EIF2C1 "Uncharacterized protein... 306 2.0e-26 3
UNIPROTKB|Q9UKV8 - symbol:EIF2C2 "Protein argonaute-2" sp... 318 2.2e-26 2
UNIPROTKB|B0JYP5 - symbol:EIF2C2 "Protein argonaute-2" sp... 318 2.2e-26 2
MGI|MGI:2446632 - symbol:Ago2 "argonaute RISC catalytic s... 318 2.2e-26 2
RGD|621255 - symbol:Ago2 "argonaute RISC catalytic compon... 318 2.2e-26 2
UNIPROTKB|F1LUS2 - symbol:Eif2c3 "Protein Eif2c3" species... 314 2.4e-26 2
UNIPROTKB|F1MG44 - symbol:EIF2C3 "Protein argonaute-3" sp... 314 2.5e-26 2
UNIPROTKB|E2R0U1 - symbol:EIF2C3 "Uncharacterized protein... 314 2.5e-26 2
UNIPROTKB|Q9H9G7 - symbol:EIF2C3 "Protein argonaute-3" sp... 314 2.5e-26 2
MGI|MGI:2446634 - symbol:Ago3 "argonaute RISC catalytic s... 314 2.5e-26 2
FB|FBgn0262739 - symbol:AGO1 "Argonaute-1" species:7227 "... 305 2.5e-26 2
UNIPROTKB|Q6QME8 - symbol:EIF2C2 "Protein argonaute-2" sp... 317 2.9e-26 2
UNIPROTKB|F1PQZ7 - symbol:EIF2C2 "Uncharacterized protein... 316 3.0e-26 2
UNIPROTKB|O77503 - symbol:EIF2C2 "Protein argonaute-2" sp... 315 4.6e-26 2
UNIPROTKB|Q6DCX2 - symbol:eif2c2 "Protein argonaute-2" sp... 314 6.6e-26 2
UNIPROTKB|I3L5V9 - symbol:EIF2C3 "Uncharacterized protein... 314 1.6e-25 1
UNIPROTKB|Q6DJB9 - symbol:eif2c2 "Protein argonaute-2" sp... 192 4.5e-25 3
TAIR|locus:2007111 - symbol:AGO7 "ARGONAUTE7" species:370... 278 2.3e-24 2
UNIPROTKB|D4A2P5 - symbol:Eif2c4 "Protein Eif2c4" species... 205 4.6e-24 4
RGD|1304583 - symbol:Ago4 "argonaute RISC catalytic compo... 205 2.2e-23 4
UNIPROTKB|Q75HC2 - symbol:AGO7 "Protein argonaute 7" spec... 190 6.0e-22 3
TAIR|locus:2197545 - symbol:AGO2 "argonaute 2" species:37... 159 4.6e-18 4
UNIPROTKB|F1LZ24 - symbol:Eif2c3 "Protein Eif2c3" species... 168 1.2e-17 3
POMBASE|SPCC736.11 - symbol:ago1 "argonaute" species:4896... 147 1.4e-17 3
WB|WBGene00011910 - symbol:T22B3.2b species:6239 "Caenorh... 174 2.9e-17 2
WB|WBGene00006449 - symbol:tag-76 species:6239 "Caenorhab... 169 1.7e-16 2
TAIR|locus:2197550 - symbol:AGO3 "ARGONAUTE 3" species:37... 153 4.7e-15 4
ASPGD|ASPL0000044981 - symbol:rsdA species:162425 "Emeric... 174 6.5e-10 2
FB|FBgn0087035 - symbol:AGO2 "Argonaute 2" species:7227 "... 166 1.8e-08 1
UNIPROTKB|G4N9J3 - symbol:MGG_14873 "Uncharacterized prot... 130 3.0e-08 2
>TAIR|locus:2059258 [details] [associations]
symbol:AGO4 "ARGONAUTE 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006342
"chromatin silencing" evidence=RCA;IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA;IMP] [GO:0006306 "DNA methylation" evidence=RCA;IMP]
[GO:0010495 "long-distance posttranscriptional gene silencing"
evidence=IMP] [GO:0009816 "defense response to bacterium,
incompatible interaction" evidence=IMP] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA;TAS] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=IGI] [GO:0035197
"siRNA binding" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007267 "cell-cell
signaling" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016569 "covalent chromatin modification" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0031047 "gene silencing by
RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0043085 "positive regulation
of catalytic activity" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0019048 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006417 GO:GO:0005730 GO:GO:0006351 GO:GO:0030529
GO:GO:0015030 SUPFAM:SSF53098 GO:GO:0031048 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0030422 EMBL:AC005623 EMBL:AY035081
EMBL:AY051033 IPI:IPI00540794 PIR:A84668 RefSeq:NP_001189613.1
RefSeq:NP_565633.1 UniGene:At.13165 ProteinModelPortal:Q9ZVD5
SMR:Q9ZVD5 DIP:DIP-53402N IntAct:Q9ZVD5 STRING:Q9ZVD5 PaxDb:Q9ZVD5
PRIDE:Q9ZVD5 EnsemblPlants:AT2G27040.1 EnsemblPlants:AT2G27040.2
GeneID:817246 KEGG:ath:AT2G27040 TAIR:At2g27040 eggNOG:NOG286051
InParanoid:Q93VG2 OMA:SFFHNDP PhylomeDB:Q9ZVD5 ProtClustDB:PLN03202
Genevestigator:Q9ZVD5 GO:GO:0005719 GO:GO:0009816 GO:GO:0006306
GO:GO:0051567 Uniprot:Q9ZVD5
Length = 924
Score = 953 (340.5 bits), Expect = 8.5e-134, Sum P(2) = 8.5e-134
Identities = 199/392 (50%), Positives = 266/392 (67%)
Query: 189 DRNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTK 248
+ N + + +VTV DYF + R I+L +S D PCI+VGKP++PTYIP+ELC+L+ LQRYTK
Sbjct: 355 NENGEFETTEVTVADYFRDTRHIDLQYSADLPCINVGKPKRPTYIPLELCALVPLQRYTK 414
Query: 249 ALTVFQRSALVEKSQQKPQEKMKIITDD-SMEHY-AQ-VMRS-----NKNDSE------- 293
ALT FQRSALVEKS+QKPQE+M +++ + +Y A+ ++RS + N ++
Sbjct: 415 ALTTFQRSALVEKSRQKPQERMTVLSKALKVSNYDAEPLLRSCGISISSNFTQVEGRVLP 474
Query: 294 -PMLR-SCGISINSRFAQVEGRILSAPRIFVPAAKIDHWAVANFSGGCDIRSLCRDLIRF 351
P L+ CG + F + GR + FV KI W V NFS C++R + DLI+
Sbjct: 475 APKLKMGCG---SETFPR-NGRWNFNNKEFVEPTKIQRWVVVNFSARCNVRQVVDDLIKI 530
Query: 352 GEMKRISTSPPLNVFEENPQFRRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDL 411
G K I + P VFEE QFRRAP +RV+ MF+ ++ K P F+LC+LPD+K+SDL
Sbjct: 531 GGSKGIEIASPFQVFEEGNQFRRAPPMIRVENMFKDIQSKLPGVPQFILCVLPDKKNSDL 590
Query: 412 YGSWKRKTLSEFGIFNQCLAPTKV-NEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
YG WK+K L+EFGI QC+APT+ N+QYL N+LLKINAKLGGLNS+L++E++ ++S
Sbjct: 591 YGPWKKKNLTEFGIVTQCMAPTRQPNDQYLTNLLLKINAKLGGLNSMLSVERTPAFTVIS 650
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPL 530
KVPTII GMDVSHGSPG R WP++S+YRASVR+Q +K EMI+SL K
Sbjct: 651 KVPTIILGMDVSHGSPGQSDVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKN 710
Query: 531 PNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+DD GI++ELLVDFY SS + KP IIIFR
Sbjct: 711 GTEDD-GIIKELLVDFYTSSNKRKPEHIIIFR 741
Score = 379 (138.5 bits), Expect = 8.5e-134, Sum P(2) = 8.5e-134
Identities = 84/167 (50%), Positives = 107/167 (64%)
Query: 22 GEKSLFTISALPHKKMEFLVLLDNPSSYRTTSNDSPDGHGSNNERDRKR-RRVSQSKTFK 80
GEK+LFT ALP KM+F V+L+ S+ R N SP+G+ S ++ DRKR RR ++SK F+
Sbjct: 132 GEKTLFTYGALPSNKMDFSVVLEEVSATRANGNGSPNGNESPSDGDRKRLRRPNRSKNFR 191
Query: 81 VEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATSYR 140
VEIS GQES+NS+EA RVLDIILRQHAA+ +
Sbjct: 192 VEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAAR----------------Q 235
Query: 141 GCFLVRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
GC LVRQSFF N+P + +GG +LGC GFHSSF+ TQGG+SLN+ V
Sbjct: 236 GCLLVRQSFFHNDPTNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDV 282
>TAIR|locus:2179008 [details] [associations]
symbol:AGO9 "ARGONAUTE 9" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0035197 "siRNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010529
"negative regulation of transposition" evidence=IMP] [GO:0048481
"ovule development" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0010529
GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 eggNOG:NOG286051 EMBL:AJ544236 EMBL:AC140977
EMBL:AK221864 IPI:IPI00538032 RefSeq:NP_197613.2 UniGene:At.31104
ProteinModelPortal:Q84VQ0 SMR:Q84VQ0 PaxDb:Q84VQ0 PRIDE:Q84VQ0
EnsemblPlants:AT5G21150.1 GeneID:832241 KEGG:ath:AT5G21150
TAIR:At5g21150 InParanoid:Q84YI4 OMA:QWPLISK PhylomeDB:Q84VQ0
Genevestigator:Q84VQ0 GO:GO:0048481 Uniprot:Q84VQ0
Length = 896
Score = 963 (344.1 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 198/383 (51%), Positives = 258/383 (67%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V++TV +Y+ R I + +SGDFPCI+VGKP++PTY PIE C+L+SLQRYTK+LT FQR+
Sbjct: 336 VEITVLNYY-KERNIEVRYSGDFPCINVGKPKRPTYFPIEFCNLVSLQRYTKSLTNFQRA 394
Query: 257 ALVEKSQQKPQEKMKIITD---DSMEHYAQVMR-------SNKNDSE------PMLRSCG 300
ALVEKS+QKP E+M +T DS + V++ +N E PML+
Sbjct: 395 ALVEKSRQKPPERMASLTKGLKDSNYNADPVLQDSGVSIITNFTQVEGRILPTPMLK--- 451
Query: 301 ISINSRFAQVEGRILSAPRIFVPAAKIDHWAVANFSGGCDIRSLCRDLIRFGEMKRISTS 360
+ + ++G+ + + WAV NFS CD +L RDLI+ G K I+
Sbjct: 452 VGKGENLSPIKGKWNFMRKTLAEPTTVTRWAVVNFSARCDTNTLIRDLIKCGREKGINVE 511
Query: 361 PPL-NVFEENPQFRRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKT 419
PP +V ENPQFR APA VRV+ MFEQ+K K K P FLLC+L +RK+SD+YG WK+K
Sbjct: 512 PPFKDVINENPQFRNAPATVRVENMFEQIKSKLPKPPLFLLCILAERKNSDVYGPWKKKN 571
Query: 420 LSEFGIFNQCLAPTKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGM 479
L + GI QC+APT++N+QYL NVLLKINAKLGGLNSLLA+E+S +P V++VPTII GM
Sbjct: 572 LVDLGIVTQCIAPTRLNDQYLTNVLLKINAKLGGLNSLLAMERSPAMPKVTQVPTIIVGM 631
Query: 480 DVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIV 539
DVSHGSPG R WP++S+Y+A VR+QS K+EMID+LFKP+ KD+ G+
Sbjct: 632 DVSHGSPGQSDIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDE-GMF 690
Query: 540 RELLVDFYKSSGQTKPSQIIIFR 562
RELL+DFY SS KP IIIFR
Sbjct: 691 RELLLDFYYSSENRKPEHIIIFR 713
Score = 268 (99.4 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 64/133 (48%), Positives = 79/133 (59%)
Query: 56 SPDGHGSN--NERDRKR-RRVSQSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRV 112
S H N N+ DRKR RR +Q+K F VEIS G+E++N ++A RV
Sbjct: 139 SSRNHAGNDTNDADRKRSRRPNQTKKFMVEISYAAKIPMQAIASALQGKETENLQDALRV 198
Query: 113 LDIILRQHAAKHMIDHRSISIFLATSYRGCFLVRQSFFQNEPRSFFDLGGGVLGCWGFHS 172
LDIILRQ AA+ +GC LVRQSFF N+ ++F +GGGV GC GFHS
Sbjct: 199 LDIILRQSAAR----------------QGCLLVRQSFFHNDVKNFVPIGGGVSGCRGFHS 242
Query: 173 SFQATQGGLSLNI 185
SF+ TQGGLSLNI
Sbjct: 243 SFRTTQGGLSLNI 255
Score = 194 (73.4 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 47/104 (45%), Positives = 63/104 (60%)
Query: 22 GEKSLFTISALPHKKMEFLVLLDN-PSSYRTTSNDSPDGHGSNNERDRKR-RRVSQSKTF 79
GEK+LFT+ ALP K++F V+L+ PSS ND+ N+ DRKR RR +Q+K F
Sbjct: 113 GEKTLFTVGALPSNKLDFSVVLEEIPSSRNHAGNDT-------NDADRKRSRRPNQTKKF 165
Query: 80 KVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILRQHAAK 123
VEIS G+E++N ++A RVLDIILRQ AA+
Sbjct: 166 MVEISYAAKIPMQAIASALQGKETENLQDALRVLDIILRQSAAR 209
>TAIR|locus:2147072 [details] [associations]
symbol:AT5G21030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00950 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006417 GO:GO:0006355 GO:GO:0006351
GO:GO:0003723 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 ProtClustDB:PLN03202 EMBL:AC069325 IPI:IPI00541100
RefSeq:NP_197602.2 UniGene:At.54936 ProteinModelPortal:Q3E984
SMR:Q3E984 PaxDb:Q3E984 PRIDE:Q3E984 EnsemblPlants:AT5G21030.1
GeneID:832227 KEGG:ath:AT5G21030 TAIR:At5g21030 eggNOG:NOG246334
InParanoid:Q3E984 OMA:IDSNICH PhylomeDB:Q3E984
Genevestigator:Q3E984 Uniprot:Q3E984
Length = 850
Score = 901 (322.2 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 196/396 (49%), Positives = 263/396 (66%)
Query: 188 KDRNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYT 247
+++N + + V++TV DYF R I L +SG PCI+VGKP +PTY PIELC L+SLQRYT
Sbjct: 307 RNQNREFEEVEITVSDYFTRIREIELRYSGGLPCINVGKPNRPTYFPIELCELVSLQRYT 366
Query: 248 KALTVFQRSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRF 307
KALT FQRS L+++S+Q PQ+++ ++T + SN ND +PML+ CG+ I S F
Sbjct: 367 KALTKFQRSNLIKESRQNPQQRIGVLT-------RALKTSNYND-DPMLQECGVRIGSDF 418
Query: 308 AQVEGRILSAPRI-------FVPA----------AKIDHWAVANFSGGCDIRSLCRDLIR 350
QVEGR+L P++ P A + WAV NFS CD + + DL R
Sbjct: 419 TQVEGRVLPTPKLKAGKEQDIYPINGSWNFKNKPATVTRWAVVNFSARCDPQKIIDDLTR 478
Query: 351 FGEMKRISTSPPLNV-FEENPQFRRAPAPVRVDRMFEQMKQKF-EKRPCFLLCLLPDRKD 408
G+MK I+ P +V FEENPQF+ A VRVD+MF+ ++ E P FLLC+L ++K+
Sbjct: 479 CGKMKGINVDSPYHVVFEENPQFKDATGSVRVDKMFQHLQSILGEVPPKFLLCIL-EKKN 537
Query: 409 SDLYGSWKRKTLSEFGIFNQCLAPTK-VNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLP 467
SD+Y K+ S + +C+ P + +N+QYL N+LLKINAKLGGLNS+L +E S +P
Sbjct: 538 SDVY----EKSCSMWNC--ECIVPPQNLNDQYLTNLLLKINAKLGGLNSVLDMELSGTMP 591
Query: 468 LVSKVPTIIFGMDVSHGSPGHXXXX-XXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSL 526
LV +VPTII GMDVSHGSPG R WP++S+YRA VR+QS K+EMIDSL
Sbjct: 592 LVMRVPTIIIGMDVSHGSPGQSDHIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDSL 651
Query: 527 FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
FKP+ +KDD GI+RELL+DF+ SSG+ KP+ IIIFR
Sbjct: 652 FKPVSDKDDQGIMRELLLDFHSSSGK-KPNHIIIFR 686
Score = 185 (70.2 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 56/156 (35%), Positives = 79/156 (50%)
Query: 62 SNNERDRKRRRVSQSKTFKVEISVXXXXX-XXXXXXXXHGQESQNSREAFRVLDIILRQH 120
S D++ + QSK F V I G+++++ +A RV+D IL Q+
Sbjct: 127 SRRNADKRLKLPHQSKKFNVAILFAPPEIPMEAIANALQGKKTKHLLDAIRVMDCILSQN 186
Query: 121 AAKHMIDHRSISIFLATSYRGCFLVRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGG 180
AA+ +GC LVRQSFF N+ + F ++G GV C GFHSSF+ TQGG
Sbjct: 187 AAR----------------QGCLLVRQSFFHNDAKYFANIGEGVDCCKGFHSSFRTTQGG 230
Query: 181 LSLNIGVKDRNDDVKCVDVTVFDYFVNHRRINLCFS 216
LSLNI V VK V D+ + ++ +N FS
Sbjct: 231 LSLNIDVSTAMI-VK--PGPVVDFLIANQGVNDPFS 263
Score = 88 (36.0 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 22 GEKSLFTISALPHKKMEFLVLLDNPSSYRTTSNDSPDGHGSNNERDRKRRRVSQSKTFKV 81
G+K+L+T+ LP ++F V+L+ S R D++ + QSK F V
Sbjct: 101 GDKNLYTVGPLPRSSLDFSVVLETAPSRRNA--------------DKRLKLPHQSKKFNV 146
Query: 82 EISVXXXXX-XXXXXXXXHGQESQNSREAFRVLDIILRQHAAK 123
I G+++++ +A RV+D IL Q+AA+
Sbjct: 147 AILFAPPEIPMEAIANALQGKKTKHLLDAIRVMDCILSQNAAR 189
>TAIR|locus:2059370 [details] [associations]
symbol:AGO6 "ARGONAUTE 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IGI] [GO:0030422
"production of siRNA involved in RNA interference" evidence=IMP]
[GO:0035197 "siRNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006351 GO:GO:0030529 SUPFAM:SSF53098
GO:GO:0006342 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035197 GO:GO:0030422
GO:GO:0006306 EMBL:AC003033 IPI:IPI00537010 PIR:T01113
RefSeq:NP_180853.2 UniGene:At.53011 ProteinModelPortal:O48771
SMR:O48771 STRING:O48771 PaxDb:O48771 PRIDE:O48771
EnsemblPlants:AT2G32940.1 GeneID:817856 KEGG:ath:AT2G32940
TAIR:At2g32940 eggNOG:NOG271046 InParanoid:O48771 OMA:CLDVGKP
PhylomeDB:O48771 Genevestigator:O48771 Uniprot:O48771
Length = 878
Score = 834 (298.6 bits), Expect = 1.0e-107, Sum P(3) = 1.0e-107
Identities = 178/395 (45%), Positives = 240/395 (60%)
Query: 187 VKDRNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRY 246
+KD +V ++TV+DYF S FPC+DVGKP +P Y+P+E C+L+SLQRY
Sbjct: 318 IKDGEREVPIREITVYDYF-KQTYTEPISSAYFPCLDVGKPDRPNYLPLEFCNLVSLQRY 376
Query: 247 TKALTVFQRSALVEKSQQKPQEKMKIITDDSMEHYAQ-----------VMRSNKNDSE-- 293
TK L+ QR LVE S+QKP E++K + +D+M Y + E
Sbjct: 377 TKPLSGRQRVLLVESSRQKPLERIKTL-NDAMHTYCYDKDPFLAGCGISIEKEMTQVEGR 435
Query: 294 ----PMLRSCGISINSRFAQVEGRILSAPRIFVPAAKIDHWAVANFSGGCDIRSLCRDLI 349
PML+ N F GR ++ + I WA+ NFS CD + R+LI
Sbjct: 436 VLKPPMLK---FGKNEDFQPCNGRWNFNNKMLLEPRAIKSWAIVNFSFPCDSSHISRELI 492
Query: 350 RFGEMKRISTSPPLNVFEENPQFRRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
G K I P + EE+PQ+++A RV++M MK KF P F+LC+LP+RK S
Sbjct: 493 SCGMRKGIEIDRPFALVEEDPQYKKAGPVERVEKMIATMKLKFPDPPHFILCILPERKTS 552
Query: 410 DLYGSWKRKTLSEFGIFNQCLAPTKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLV 469
D+YG WK+ L+E GI QC+ P K+++QYL NVLLKIN+KLGG+NSLL IE S N+PL+
Sbjct: 553 DIYGPWKKICLTEEGIHTQCICPIKISDQYLTNVLLKINSKLGGINSLLGIEYSYNIPLI 612
Query: 470 SKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKP 529
+K+PT+I GMDVSHG PG + WP++SRYRA+VR+QS +LEMIDSLF+P
Sbjct: 613 NKIPTLILGMDVSHGPPGRADVPSVAAVVGSKCWPLISRYRAAVRTQSPRLEMIDSLFQP 672
Query: 530 LPN--KDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ N K D GI+ EL V+FY++S KP QIIIFR
Sbjct: 673 IENTEKGDNGIMNELFVEFYRTSRARKPKQIIIFR 707
Score = 138 (53.6 bits), Expect = 1.0e-107, Sum P(3) = 1.0e-107
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 140 RGCFLVRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
RGC LVRQ+FF ++ +GGGV+G G HSSF+ T GGLSLNI V
Sbjct: 203 RGCLLVRQAFFHSDGHPM-KVGGGVIGIRGLHSSFRPTHGGLSLNIDV 249
Score = 127 (49.8 bits), Expect = 1.0e-107, Sum P(3) = 1.0e-107
Identities = 33/109 (30%), Positives = 59/109 (54%)
Query: 17 KLGPTGEKSLFTISALPHKKMEFLVLLDNPSSYRTTSNDSPDGHGSNNERDRKRRRVSQS 76
+L GEK+L+T+ LP + +FLV+++ S R DG GS++ ++ +R
Sbjct: 97 RLAYDGEKTLYTVGPLPQNEFDFLVIVEGSFSKRDCGVS--DG-GSSSGTCKRSKRSFLP 153
Query: 77 KTFKVEISVXXXXXXXXXXXXXHGQES--QNSREAFRVLDIILRQHAAK 123
+++KV+I G + +++++A RVLDI+LRQ AA+
Sbjct: 154 RSYKVQIHYAAEIPLKTVLGTQRGAYTPDKSAQDALRVLDIVLRQQAAE 202
>UNIPROTKB|Q69VD5 [details] [associations]
symbol:PHN1 "Protein argonaute PNH1" species:39947 "Oryza
sativa Japonica Group" [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0019827
"stem cell maintenance" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
EMBL:AP008212 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 GO:GO:0048366 GO:GO:0010586 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0003743 HSSP:Q9UL18
GO:GO:0019827 EMBL:AB081950 EMBL:AP004236 ProteinModelPortal:Q69VD5
KEGG:dosa:Os06t0597400-00 Gramene:Q69VD5 Uniprot:Q69VD5
Length = 979
Score = 340 (124.7 bits), Expect = 9.5e-46, Sum P(5) = 9.5e-46
Identities = 86/254 (33%), Positives = 134/254 (52%)
Query: 322 VPAAKIDHWAVANFSGGCD---IRSLCRDLIRFGEMK--RISTSPPLNVFEENP-QFRRA 375
+ K++HWA NFS R C++L + ++ ++ P + ++ P Q +A
Sbjct: 542 INGCKVNHWACINFSRSVQETTARGFCQELAQMCQISGMEFNSEPVIPIYSARPDQVEKA 601
Query: 376 PAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAPT-- 433
V + ++K K E LL +LPD S LYG KR ++ G+ +QC
Sbjct: 602 LKHV-YNMSLNKLKGK-ELE--LLLAILPDNNGS-LYGDIKRICETDLGLISQCCLTKHV 656
Query: 434 -KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXX 492
K+++QYL NV LKIN K+GG N++L S +PLVS +PTIIFG DV+H G
Sbjct: 657 FKISKQYLANVSLKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSP 716
Query: 493 XXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYK 548
++WP +++Y V +Q+ + E+I L+K P G++RELL+ F K
Sbjct: 717 SIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRK 776
Query: 549 SSGQTKPSQIIIFR 562
++GQ KP +II +R
Sbjct: 777 ATGQ-KPLRIIFYR 789
Score = 153 (58.9 bits), Expect = 9.5e-46, Sum P(5) = 9.5e-46
Identities = 33/100 (33%), Positives = 58/100 (58%)
Query: 220 PCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSALVEKSQQKPQEK-MKIITDDSM 278
PC+ VG +K Y+P+E C ++ QRYTK L Q ++L++ + ++P+E+ M I+
Sbjct: 424 PCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCRRPREQEMDIL----- 478
Query: 279 EHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILSAP 318
Q ++ N + +P + GI+I+ + VE R+L AP
Sbjct: 479 ----QTVQQNGYEQDPYAKEFGINISEKLTSVEARVLPAP 514
Score = 71 (30.1 bits), Expect = 9.5e-46, Sum P(5) = 9.5e-46
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNI 185
+ +SF+ + R LG G+ GF+ S + TQ GLSLNI
Sbjct: 281 IGRSFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLSLNI 321
Score = 54 (24.1 bits), Expect = 9.5e-46, Sum P(5) = 9.5e-46
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILRQHAAKHMI 126
+ + ++V I G+++ +EA +VLDI+LR+ A + +
Sbjct: 228 REREYRVAIKFAARADLHHLRQFIAGRQADAPQEALQVLDIVLRELANRRYV 279
Score = 48 (22.0 bits), Expect = 9.5e-46, Sum P(5) = 9.5e-46
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 22 GEKSLFTISALPHKKMEFLVLL 43
G K+L+T LP EF+V L
Sbjct: 195 GRKNLYTAGTLPFDAREFVVRL 216
>TAIR|locus:2170897 [details] [associations]
symbol:AGO10 "ARGONAUTE 10" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0035019 "somatic stem
cell maintenance" evidence=IMP] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010050
"vegetative phase change" evidence=RCA] [GO:0010051 "xylem and
phloem pattern formation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
UniProt:Q9XGW1 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0030529
SUPFAM:SSF53098 EMBL:AF154272 EMBL:AJ223508 EMBL:AB026651
IPI:IPI00539560 PIR:T52134 RefSeq:NP_001190464.1 RefSeq:NP_199194.1
UniGene:At.11438 ProteinModelPortal:Q9XGW1 SMR:Q9XGW1 STRING:Q9XGW1
PaxDb:Q9XGW1 PRIDE:Q9XGW1 EnsemblPlants:AT5G43810.1
EnsemblPlants:AT5G43810.2 GeneID:834403 KEGG:ath:AT5G43810
TAIR:At5g43810 eggNOG:NOG279895 HOGENOM:HOG000116043
InParanoid:Q9XGW1 KO:K11593 OMA:ENDILRT PhylomeDB:Q9XGW1
ProtClustDB:CLSN2686847 Genevestigator:Q9XGW1 GermOnline:AT5G43810
GO:GO:0035198 GO:GO:0031047 GO:GO:0048366 GO:GO:0010586
GO:GO:0035019 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
Length = 988
Score = 329 (120.9 bits), Expect = 2.7e-45, Sum P(5) = 2.7e-45
Identities = 85/249 (34%), Positives = 130/249 (52%)
Query: 327 IDHWAVANFSGGCD---IRSLCRDLIRFGEMKRISTSP-P-LNVFEENP-QFRRAPAPVR 380
+ WA NFS R C +L + E+ + +P P + ++ P Q +A V
Sbjct: 552 VSRWACVNFSRSVQENVARGFCNELGQMCEVSGMEFNPEPVIPIYSARPDQVEKALKHVY 611
Query: 381 VDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAPT---KVNE 437
M + ++ E LL +LPD S LYG KR +E G+ +QC K+++
Sbjct: 612 HTSMNKTKGKELE----LLLAILPDNNGS-LYGDLKRICETELGLISQCCLTKHVFKISK 666
Query: 438 QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXX 497
QYL NV LKIN K+GG N++L S +PLVS +PTIIFG DV+H G
Sbjct: 667 QYLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAV 726
Query: 498 XXXRNWPILSRYRASVRSQSTKLEMIDSLFK----PLPNKDDAGIVRELLVDFYKSSGQT 553
++WP +++Y V +Q+ + E+I L+K P+ G++R+LL+ F K++GQ
Sbjct: 727 VASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQ- 785
Query: 554 KPSQIIIFR 562
KP +II +R
Sbjct: 786 KPLRIIFYR 794
Score = 170 (64.9 bits), Expect = 2.7e-45, Sum P(5) = 2.7e-45
Identities = 40/126 (31%), Positives = 68/126 (53%)
Query: 193 DVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTV 252
D C +V +YF + + PC+ VG +K +Y+P+E C ++ QRYTK L
Sbjct: 403 DENCTMKSVIEYFQEMYGFTIQHT-HLPCLQVGNQKKASYLPMEACKIVEGQRYTKRLNE 461
Query: 253 FQRSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEG 312
Q +AL++ + Q+P+++ I +++H N D +P + G++I+ + A VE
Sbjct: 462 KQITALLKVTCQRPRDRENDILR-TVQH-------NAYDQDPYAKEFGMNISEKLASVEA 513
Query: 313 RILSAP 318
RIL AP
Sbjct: 514 RILPAP 519
Score = 71 (30.1 bits), Expect = 2.7e-45, Sum P(5) = 2.7e-45
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNI 185
V +SFF + ++ LG G+ GF+ S + TQ GLSLNI
Sbjct: 286 VGRSFFSPDIKTPQRLGEGLESWCGFYQSIRPTQMGLSLNI 326
Score = 53 (23.7 bits), Expect = 2.7e-45, Sum P(5) = 2.7e-45
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILRQHAAK 123
+ +++KV I G+ + +EA ++LDI+LR+ + K
Sbjct: 233 RERSYKVAIKFVARANMHHLGEFLAGKRADCPQEAVQILDIVLRELSVK 281
Score = 43 (20.2 bits), Expect = 2.7e-45, Sum P(5) = 2.7e-45
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 22 GEKSLFTISALPHKKMEFLV 41
G KSL+T LP EF V
Sbjct: 199 GRKSLYTAGELPFTWKEFSV 218
>UNIPROTKB|Q851R2 [details] [associations]
symbol:MEL1 "Protein argonaute MEL1" species:39947 "Oryza
sativa Japonica Group" [GO:0005730 "nucleolus" evidence=IMP]
[GO:0005731 "nucleolus organizer region" evidence=IMP] [GO:0005737
"cytoplasm" evidence=RCA] [GO:0007140 "male meiosis" evidence=IMP]
[GO:0007143 "female meiosis" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0033169 "histone H3-K9
demethylation" evidence=IDA] [GO:0035197 "siRNA binding"
evidence=ISS] [GO:0055046 "microgametogenesis" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:DP000009 EMBL:AP008209
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
KO:K11596 GO:GO:0035197 HSSP:Q9UL18 OMA:AREGPVE GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
EMBL:AB297928 EMBL:AC104321 RefSeq:NP_001051583.2 UniGene:Os.80058
ProteinModelPortal:Q851R2 EnsemblPlants:LOC_Os03g58600.1
GeneID:4334449 KEGG:dosa:Os02t0616300-00 KEGG:dosa:Os03t0789466-00
KEGG:dosa:Os03t0800200-00 KEGG:osa:4334449 Gramene:Q851R2
ProtClustDB:CLSN2694409 Uniprot:Q851R2
Length = 1058
Score = 315 (115.9 bits), Expect = 3.0e-42, Sum P(5) = 3.0e-42
Identities = 86/250 (34%), Positives = 134/250 (53%)
Query: 327 IDHWAVANFSGGC--DIRSLCRDLIRFGEMKRISTSP-PL-NVFEENPQ-FRRAPAPVRV 381
+D+W +FS +++ C DLI+ +S +P P+ +V NP A V
Sbjct: 621 VDNWTCLSFSRMRPEEVQRFCGDLIQMCNATGMSFNPRPVVDVRSTNPNNIENALRDVH- 679
Query: 382 DRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAP---TKVNEQ 438
R E + ++ + L+ +LP+ S YG KR ++ GI +QC P ++ N+Q
Sbjct: 680 RRTSELLAREGKGGLQLLIVILPEVSGS--YGKIKRVCETDLGIVSQCCLPRHASRPNKQ 737
Query: 439 YLMNVLLKINAKLGGLNSLLAIEQSKN-LPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXX 497
YL NV LKIN K+GG N++L +N +P VS+VPTIIFG DV+H PG
Sbjct: 738 YLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHPPPGEDSASSIAAV 797
Query: 498 XXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKD-----DAGIVRELLVDFYKSSGQ 552
+WP +++YR V +Q + E+I+ LF KD + G++RELL+ F K +G+
Sbjct: 798 VASMDWPEITKYRGLVSAQPHRQEIIEDLFSV--GKDPVKVVNGGMIRELLIAFRKKTGR 855
Query: 553 TKPSQIIIFR 562
+P +II +R
Sbjct: 856 -RPERIIFYR 864
Score = 133 (51.9 bits), Expect = 3.0e-42, Sum P(5) = 3.0e-42
Identities = 32/121 (26%), Positives = 61/121 (50%)
Query: 200 TVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSALV 259
TV YF + L ++ +PC+ G +P Y+P+E+C ++ QRY+K L Q + ++
Sbjct: 479 TVVQYFWDRYNYRLKYAS-WPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNDKQVTNIL 537
Query: 260 EKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILSAPR 319
+ Q+PQ++ + I H +++ NK + + GI + + V R+L P
Sbjct: 538 RATCQRPQQREQSI------H--EMVLHNKYTEDRFAQEFGIKVCNDLVSVPARVLPPPM 589
Query: 320 I 320
+
Sbjct: 590 L 590
Score = 87 (35.7 bits), Expect = 3.0e-42, Sum P(5) = 3.0e-42
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCW-GFHSSFQATQGGLSLNIGVKDRNDDVKCVDVTVF- 202
V +SFF + D+G G L CW G++ S + TQ GLSLNI + K V V F
Sbjct: 355 VSRSFFSTQFGHRGDIGEG-LECWRGYYQSLRPTQMGLSLNIDIS-ATSFFKPVTVIQFV 412
Query: 203 DYFVNHR 209
+ F+N R
Sbjct: 413 EEFLNIR 419
Score = 59 (25.8 bits), Expect = 3.0e-42, Sum P(5) = 3.0e-42
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 22 GEKSLFTISALPHKKMEFLVLLDNP 46
G KSL+T +LP + EF+V L +P
Sbjct: 270 GRKSLYTAGSLPFESEEFVVKLIDP 294
Score = 49 (22.3 bits), Expect = 3.0e-42, Sum P(5) = 3.0e-42
Identities = 10/51 (19%), Positives = 23/51 (45%)
Query: 69 KRRRVSQSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILRQ 119
K+ + + +K+ I + G++ +E +VLD++LR+
Sbjct: 296 KKDKERAEREYKITIRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVVLRE 346
>TAIR|locus:2057851 [details] [associations]
symbol:AGO5 "ARGONAUTE 5" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 EMBL:AC006929 GO:GO:0030529
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035197 IPI:IPI00516720 PIR:A84678
RefSeq:NP_850110.1 UniGene:At.50103 PDB:4G0O PDBsum:4G0O
ProteinModelPortal:Q9SJK3 SMR:Q9SJK3 PaxDb:Q9SJK3 PRIDE:Q9SJK3
EnsemblPlants:AT2G27880.1 GeneID:817334 KEGG:ath:AT2G27880
TAIR:At2g27880 InParanoid:Q9SJK3 OMA:AREGPVE PhylomeDB:Q9SJK3
Genevestigator:Q9SJK3 GermOnline:AT2G27880 GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
Uniprot:Q9SJK3
Length = 997
Score = 367 (134.2 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 115/392 (29%), Positives = 180/392 (45%)
Query: 200 TVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSALV 259
TV YF + + P I G +P Y+P+ELC + QRYTK L Q +AL+
Sbjct: 430 TVVQYFAEKYNYRVKYQA-LPAIQTGSDTRPVYLPMELCQIDEGQRYTKRLNEKQVTALL 488
Query: 260 EKSQQKPQEKMKII---------TDDSMEHYAQVMRSNKNDSE------PMLR--SCGIS 302
+ + Q+P ++ I DD + + + + E PML+ G
Sbjct: 489 KATCQRPPDRENSIKNLVVKNNYNDDLSKEFGMSVTTQLASIEARVLPPPMLKYHDSGKE 548
Query: 303 --INSRFAQVEGRILSAPRIFVPAAKIDHWAVANFSGGCDI---RSLCRDLIRFGEMKRI 357
+N R Q + V AK+ W +FS D + C+ LI K +
Sbjct: 549 KMVNPRLGQWN----MIDKKMVNGAKVTSWTCVSFSTRIDRGLPQEFCKQLIGMCVSKGM 604
Query: 358 STSPPLNVFEENPQFRRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKR 417
P + P F P P ++ + ++ L+ +LPD S YG KR
Sbjct: 605 EFKPQPAI----P-FISCP-PEHIEEALLDIHKRAPGLQ-LLIVILPDVTGS--YGKIKR 655
Query: 418 KTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPT 474
+E GI +QC P K+N+QY+ NV LKIN K GG N++L +N+PL++ PT
Sbjct: 656 ICETELGIVSQCCQPRQVNKLNKQYMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPT 715
Query: 475 IIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPL--PN 532
II G DV+H PG +WP +++YR V +Q+ + E+I L+K + P
Sbjct: 716 IIMGADVTHPQPGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQ 775
Query: 533 KD--DAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +G++RE + F +++GQ P +II +R
Sbjct: 776 RGLVHSGLIREHFIAFRRATGQI-PQRIIFYR 806
Score = 73 (30.8 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 35/139 (25%), Positives = 58/139 (41%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILRQHAAKHMIDHRSIS-I 133
+ + FKV + ++ + + +VLD++LR + D+ S+
Sbjct: 250 KDRPFKVAVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSN---DYVSVGRS 306
Query: 134 FLATSYRGCFLVRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGVKDRNDD 193
F TS L + + + R +LG G+ G+ S + TQ GLSLNI V R+
Sbjct: 307 FFHTS-----LGKDA---RDGRG--ELGDGIEYWRGYFQSLRLTQMGLSLNIDVSARSFY 356
Query: 194 VKCVDVTVFDYFVNHRRIN 212
V F+N R +N
Sbjct: 357 EPIVVTDFISKFLNIRDLN 375
Score = 56 (24.8 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 22 GEKSLFTISALPHKKMEFLVLLDNPSSYRTTSNDSP 57
G KSL+T LP EF+V L + ++ D P
Sbjct: 218 GRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRP 253
>ZFIN|ZDB-GENE-030131-5357 [details] [associations]
symbol:ago4 "argonaute RISC catalytic component 4"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950
ZFIN:ZDB-GENE-030131-5357 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:CABZ01005377 EMBL:CABZ01005378
EMBL:CABZ01005379 IPI:IPI00996534 Ensembl:ENSDART00000129463
Bgee:E7F814 Uniprot:E7F814
Length = 874
Score = 228 (85.3 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 79/251 (31%), Positives = 128/251 (50%)
Query: 321 FVPAAKIDHWAVANFSGGCDIRSLCR-DLIR-F-GEMKRISTSPPLNVFEENPQF-RRAP 376
F +I WAVA F+ + CR DL++ F ++++IS + + + P F + A
Sbjct: 447 FYAGIEIKVWAVACFAP----QKQCREDLLKSFTDQLRKISKDAGMPI-QGQPCFCKYAQ 501
Query: 377 APVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAP---T 433
V+ MF+ +K + ++ +LP + + +Y KR + G+ QC+
Sbjct: 502 GADSVEPMFKHLKMSYVGLQ-LIVVILPGK--TPVYAEVKRVGDTLLGMATQCVQVKNVV 558
Query: 434 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXX 493
K + Q L N+ LKINAKLGG+N++L Q P V + P I G DV+H G
Sbjct: 559 KTSPQTLSNLCLKINAKLGGINNVLVPHQR---PSVFQQPVIFLGADVTHPPAGDGKKPS 615
Query: 494 XXXXXXXRNW-PILSRYRASVRSQSTKLEMI-DSLFKPLPNKDDAGIVRELLVDFYKSSG 551
+ P SRY A+VR Q+++ ++ + LF +D +VRELL+ FYKS+
Sbjct: 616 IAAVVGSMDGHP--SRYCATVRVQTSRQDLSQEQLFSQEVIQDLTNMVRELLIQFYKST- 672
Query: 552 QTKPSQIIIFR 562
+ KP++II +R
Sbjct: 673 RFKPTRIIYYR 683
Score = 156 (60.0 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 36/128 (28%), Positives = 69/128 (53%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 294 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 352
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ +V G
Sbjct: 353 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTG 404
Query: 313 RILSAPRI 320
R+L AP +
Sbjct: 405 RVLPAPML 412
Score = 64 (27.6 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 169 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 211
Score = 47 (21.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATS 138
GQE +++ V +I+ Q K + D+++ ++ AT+
Sbjct: 323 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATA 361
>UNIPROTKB|F1LUQ5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1304583 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00359347
Ensembl:ENSRNOT00000035373 Uniprot:F1LUQ5
Length = 860
Score = 329 (120.9 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 113/398 (28%), Positives = 194/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L +S PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 291 QAMECTVAQYFKQKYNLQLKYS-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 349
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 350 TSTMIKATARS--------APDRQEEISRLVKSNSVLGGPDPYLKEFGIVVHNEMTELMG 401
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 402 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 461
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 462 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--T 517
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 518 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 574
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E+
Sbjct: 575 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEIAQE 632
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L F +D + RELL+ FYKS+ + KP++II +R
Sbjct: 633 LLFSQEVVQDLTSMARELLIQFYKST-RFKPTRIIYYR 669
Score = 62 (26.9 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 166 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 208
Score = 37 (18.1 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILR 118
+ +TFKV + G S+ ++ + LD+I R
Sbjct: 113 KDQTFKVSVQWVSVVSLQLLLEALAGHLSEVPDDSVQALDVITR 156
>UNIPROTKB|F1PGN2 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:AAEX03009640
Ensembl:ENSCAFT00000005657 Uniprot:F1PGN2
Length = 794
Score = 324 (119.1 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 112/398 (28%), Positives = 194/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 225 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 283
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 284 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 335
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 336 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 395
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 396 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--T 451
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 452 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 508
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E+
Sbjct: 509 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEISQE 566
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D +VRELL+ FYKS+ + KP++II +R
Sbjct: 567 LLYSQEVIQDLTNMVRELLIQFYKST-RFKPTRIIYYR 603
Score = 64 (27.6 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 100 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 142
>WB|WBGene00000105 [details] [associations]
symbol:alg-1 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IGI;IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0040025 "vulval development" evidence=IMP] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IPI]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0009792 GO:GO:0002009
GO:GO:0040010 GO:GO:0018996 GO:GO:0040011 GO:GO:0040018
GO:GO:0040035 GO:GO:0007281 SUPFAM:SSF53098 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GeneTree:ENSGT00640000091312 OMA:IKLEAEY
GO:GO:0040025 EMBL:Z69661 EMBL:Z69663 RefSeq:NP_001257239.1
ProteinModelPortal:G5EES3 SMR:G5EES3 EnsemblMetazoa:F48F7.1b
GeneID:181504 KEGG:cel:CELE_F48F7.1 CTD:181504 WormBase:F48F7.1b
Uniprot:G5EES3
Length = 1023
Score = 335 (123.0 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 115/394 (29%), Positives = 193/394 (48%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
++ TV YF + RI L + PC+ VG+ +K TY+P E+C+++ QR K LT Q S
Sbjct: 468 IECTVAKYFYDKYRIQLKYP-HLPCLQVGQEQKHTYLPPEVCNIVPGQRCIKKLTDVQTS 526
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + E+ + I++ ++R + ++P GI+IN +V+GR+LS
Sbjct: 527 TMIKATARSAPEREREISN--------LVRKAEFSADPFAHEFGITINPAMTEVKGRVLS 578
Query: 317 APRIF----VPAAKIDHWAVANFSG-----GCDIRS---LC---------RDLIRF-GEM 354
AP++ A + + V + G G D+R C DL F ++
Sbjct: 579 APKLLYGGRTRATALPNQGVWDMRGKQFHTGIDVRVWAIACFAQQQHVKENDLRMFTNQL 638
Query: 355 KRISTSPPLNVFEENPQFRRAPAPV-RVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
+RIS + + NP F + V +V+ MF+ +KQ + ++ +LP + + +Y
Sbjct: 639 QRISNDAGMPIVG-NPCFCKYAVGVEQVEPMFKYLKQNYSGIQ-LVVVVLPGK--TPVYA 694
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL-PLV 469
KR + GI QC+ + Q L N+ LK+N KLGG+NS+L N+ P +
Sbjct: 695 EVKRVGDTVLGIATQCVQAKNAIRTTPQTLSNLCLKMNVKLGGVNSILL----PNVRPRI 750
Query: 470 SKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFK 528
P I FG D++H G + P SRY A+VR Q + E+I L
Sbjct: 751 FNEPVIFFGCDITHPPAGDSRKPSIAAVVGSMDAHP--SRYAATVRVQQHRQEIISDL-- 806
Query: 529 PLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+VRELLV FY+++ + KP++I+++R
Sbjct: 807 -------TYMVRELLVQFYRNT-RFKPARIVVYR 832
Score = 55 (24.4 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 160 LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
LGGG +GFH S + +Q + LNI V
Sbjct: 355 LGGGREVWFGFHQSVRPSQWKMMLNIDV 382
>UNIPROTKB|Q9HCK5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IDA] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
EMBL:CH471059 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 OMA:ENDILRT
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 CTD:192670
EMBL:AB046787 EMBL:AL359186 EMBL:AL354864 EMBL:BC152450
IPI:IPI00030602 RefSeq:NP_060099.2 UniGene:Hs.471492
ProteinModelPortal:Q9HCK5 SMR:Q9HCK5 IntAct:Q9HCK5 STRING:Q9HCK5
PhosphoSite:Q9HCK5 DMDM:38372393 PaxDb:Q9HCK5 PRIDE:Q9HCK5
DNASU:192670 Ensembl:ENST00000373210 GeneID:192670 KEGG:hsa:192670
UCSC:uc001bzj.2 GeneCards:GC01P036273 HGNC:HGNC:18424 HPA:CAB012179
MIM:607356 neXtProt:NX_Q9HCK5 PharmGKB:PA38330 InParanoid:Q9HCK5
PhylomeDB:Q9HCK5 GenomeRNAi:192670 NextBio:89373
ArrayExpress:Q9HCK5 Bgee:Q9HCK5 CleanEx:HS_EIF2C4
Genevestigator:Q9HCK5 GermOnline:ENSG00000134698 Uniprot:Q9HCK5
Length = 861
Score = 324 (119.1 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 112/398 (28%), Positives = 194/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 292 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 350
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 351 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 402
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 403 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 462
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 463 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--T 518
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 519 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 575
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E+
Sbjct: 576 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEISQE 633
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D +VRELL+ FYKS+ + KP++II +R
Sbjct: 634 LLYSQEVIQDLTNMVRELLIQFYKST-RFKPTRIIYYR 670
Score = 64 (27.6 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 167 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 209
>UNIPROTKB|F1SV64 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:CU929817
Ensembl:ENSSSCT00000004025 Uniprot:F1SV64
Length = 861
Score = 324 (119.1 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 112/398 (28%), Positives = 194/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 292 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 350
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 351 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 402
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 403 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 462
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 463 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--T 518
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 519 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 575
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E+
Sbjct: 576 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEISQE 633
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D +VRELL+ FYKS+ + KP++II +R
Sbjct: 634 LLYSQEVIQDLTNMVRELLIQFYKST-RFKPTRIIYYR 670
Score = 64 (27.6 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 167 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 209
>UNIPROTKB|E1C5I5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AADN02043839 EMBL:AADN02043840
EMBL:AADN02043841 IPI:IPI00822132 Ensembl:ENSGALT00000040886
ArrayExpress:E1C5I5 Uniprot:E1C5I5
Length = 794
Score = 320 (117.7 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 112/398 (28%), Positives = 193/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 225 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 283
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 284 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 335
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 336 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 395
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 396 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKLTYVGLQ-LIVVILPGK--T 451
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 452 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 508
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E
Sbjct: 509 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQETSQE 566
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D +VRELL+ FYKS+ + KP++II +R
Sbjct: 567 LLYSQEVIQDLTNMVRELLIQFYKST-RFKPTRIIYYR 603
Score = 64 (27.6 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 100 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 142
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILR 118
+ +TFKV I G ++ ++ + LD+I R
Sbjct: 47 KDQTFKVSIQWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITR 90
>UNIPROTKB|Q5ZMW0 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=ISS] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=ISS]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 HSSP:Q9UL18 GO:GO:0006402 EMBL:AJ719274
IPI:IPI00735148 RefSeq:NP_001034365.1 UniGene:Gga.42596
ProteinModelPortal:Q5ZMW0 SMR:Q5ZMW0 STRING:Q5ZMW0 GeneID:419629
KEGG:gga:419629 CTD:192670 InParanoid:Q5ZMW0 NextBio:20822659
ArrayExpress:Q5ZMW0 Uniprot:Q5ZMW0
Length = 794
Score = 320 (117.7 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 112/398 (28%), Positives = 193/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 225 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 283
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 284 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 335
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 336 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 395
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 396 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKLTYVGLQ-LIVVILPGK--T 451
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 452 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 508
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E
Sbjct: 509 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQETSQE 566
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D +VRELL+ FYKS+ + KP++II +R
Sbjct: 567 LLYSQEVIQDLTNMVRELLIQFYKST-RFKPTRIIYYR 603
Score = 64 (27.6 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 100 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 142
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILR 118
+ +TFKV I G ++ ++ + LD+I R
Sbjct: 47 KDQTFKVSIQWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITR 90
>UNIPROTKB|Q4KLV6 [details] [associations]
symbol:eif2c4 "Protein argonaute-4" species:8355 "Xenopus
laevis" [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0003723 SUPFAM:SSF53098 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035278
HSSP:Q9UL18 GO:GO:0006402 CTD:192670 EMBL:BC098982
RefSeq:NP_001089574.1 UniGene:Xl.79902 ProteinModelPortal:Q4KLV6
SMR:Q4KLV6 GeneID:734630 KEGG:xla:734630 Xenbase:XB-GENE-1006885
Uniprot:Q4KLV6
Length = 884
Score = 321 (118.1 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 112/398 (28%), Positives = 193/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 315 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 373
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 374 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 425
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 426 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 485
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 486 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKLTYVGLQ-LIVVILPGK--T 541
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 542 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 598
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E
Sbjct: 599 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQETTQE 656
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D +VRELL+ FYKS+ + KP++II +R
Sbjct: 657 LLYSQEVIQDLCNMVRELLIQFYKST-RFKPTRIIYYR 693
Score = 64 (27.6 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 190 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 232
Score = 38 (18.4 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILR 118
+ +TFKV I G S+ ++ + LD+I R
Sbjct: 137 KDQTFKVTIQWVSVVSLQLLLEALSGHLSEVPDDSVQALDVITR 180
>UNIPROTKB|F1P3Z1 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402
"mRNA catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 IPI:IPI00735148
EMBL:AADN02043839 EMBL:AADN02043840 EMBL:AADN02043841
Ensembl:ENSGALT00000003521 ArrayExpress:F1P3Z1 Uniprot:F1P3Z1
Length = 847
Score = 320 (117.7 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 112/398 (28%), Positives = 193/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 278 QAMECTVAQYFKQKYSLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 336
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 337 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 388
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 389 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 448
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 449 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKLTYVGLQ-LIVVILPGK--T 504
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 505 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 561
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E
Sbjct: 562 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQETSQE 619
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D +VRELL+ FYKS+ + KP++II +R
Sbjct: 620 LLYSQEVIQDLTNMVRELLIQFYKST-RFKPTRIIYYR 656
Score = 64 (27.6 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 153 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 195
Score = 37 (18.1 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILR 118
+ +TFKV I G ++ ++ + LD+I R
Sbjct: 100 KDQTFKVSIQWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITR 143
>UNIPROTKB|F1MXK6 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:DAAA02009205
IPI:IPI01001804 Ensembl:ENSBTAT00000020250 Uniprot:F1MXK6
Length = 850
Score = 315 (115.9 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 111/397 (27%), Positives = 192/397 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 291 QAMECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 349
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKN--DSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ G+ +++ ++ G
Sbjct: 350 TSTMIKATARS--------APDRQEEISRLVKSNSTVGGPDPYLKEFGVVVHNDMTELTG 401
Query: 313 RILSAPRI-------FVPAAKIDHWAVAN--FSGGCDIR----------SLCR-DLIR-F 351
R+L AP + V W + F G +I+ CR DL++ F
Sbjct: 402 RVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 461
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 462 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--T 517
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q
Sbjct: 518 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR--- 574
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E+I
Sbjct: 575 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEVIQD 632
Query: 526 LFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L +VRELL+ FYKS+ + KP++II +R
Sbjct: 633 L---------TNMVRELLIQFYKST-RFKPTRIIYYR 659
Score = 64 (27.6 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 166 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 208
>WB|WBGene00000106 [details] [associations]
symbol:alg-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding"
evidence=IPI] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IPI] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035068
GeneTree:ENSGT00640000091312 EMBL:FO081675 CTD:3355106
RefSeq:NP_871992.1 ProteinModelPortal:O16720 SMR:O16720
IntAct:O16720 STRING:O16720 PaxDb:O16720 EnsemblMetazoa:T07D3.7a
GeneID:173468 KEGG:cel:CELE_T07D3.7 UCSC:T07D3.7a WormBase:T07D3.7a
InParanoid:O16720 OMA:YWACINF NextBio:879789 ArrayExpress:O16720
Uniprot:O16720
Length = 910
Score = 323 (118.8 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 111/397 (27%), Positives = 191/397 (48%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
++ TV YF + RI L + PC+ VG+ +K TY+P E+C ++ QR K LT Q S
Sbjct: 352 IECTVAKYFFDKYRIQLKYP-HLPCLQVGQEQKHTYLPPEVCDIVPGQRCLKKLTDVQTS 410
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + E+ + I +++ + ++P GI+IN +V+GR+LS
Sbjct: 411 TMIKATARSAPEREREI--------CKLVSKAELSADPFAHEFGITINPAMTEVKGRVLS 462
Query: 317 APRI------------------------FVPAAKIDHWAVANFSGGCDIRSLCRDLIRFG 352
AP++ F ++ WA+A F+ ++ DL F
Sbjct: 463 APKLLYGGRHRATTALPNQGVWDMRGKQFHTGMEVRTWAIACFAQQSHVKE--NDLRMFT 520
Query: 353 -EMKRISTSPPLNVFEENPQFRRAPAPV-RVDRMFEQMKQKFEKRPCFLLCLLPDRKDSD 410
+++RIST + + P F + + V +V+ MF+ +KQ + ++ +LP + +
Sbjct: 521 TQLQRISTDAGMPIIG-TPMFCKYASGVEQVEPMFKYLKQTYSAIQ-LIVVVLPGK--TP 576
Query: 411 LYGSWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL- 466
+Y KR + GI QC+ + Q L N+ LK+N KLGG+NS+L N+
Sbjct: 577 IYAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSNLCLKMNVKLGGVNSILL----PNVR 632
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDS 525
P + P I G D++H + G + P SRY A+VR Q + E+I
Sbjct: 633 PRIFNEPVIFLGCDITHPAAGDTRKPSIAAVVGSMDAHP--SRYAATVRVQQHRQEIITD 690
Query: 526 LFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L +VRELLV FY+++ + KP++I+++R
Sbjct: 691 L---------TYMVRELLVQFYRNT-RFKPARIVVYR 717
Score = 56 (24.8 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 27/88 (30%), Positives = 36/88 (40%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATSYRGCFLVRQSFFQNEPRSFFD 159
G+ Q EA + +D+ILR H S F V + Q S
Sbjct: 188 GRVRQVPHEAVQSIDVILR-HLPSLKYTPVGRSFFTPPG------VMKPGMQMHQES--K 238
Query: 160 LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
LGGG +GFH S + +Q + LNI V
Sbjct: 239 LGGGREVWFGFHQSVRPSQWKMMLNIDV 266
>MGI|MGI:1924100 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic subunit 4"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:1924100
GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606935 GeneTree:ENSGT00640000091310
GO:GO:0006402 CTD:192670 EMBL:AB081474 EMBL:AK030018 EMBL:BC096023
EMBL:AK129395 IPI:IPI00622422 IPI:IPI00762672 RefSeq:NP_694817.2
UniGene:Mm.86705 ProteinModelPortal:Q8CJF8 SMR:Q8CJF8 STRING:Q8CJF8
PhosphoSite:Q8CJF8 PaxDb:Q8CJF8 PRIDE:Q8CJF8
Ensembl:ENSMUST00000084289 GeneID:76850 KEGG:mmu:76850
UCSC:uc008utk.2 NextBio:345923 Bgee:Q8CJF8 Genevestigator:Q8CJF8
GermOnline:ENSMUSG00000042500 Uniprot:Q8CJF8
Length = 861
Score = 315 (115.9 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 109/398 (27%), Positives = 192/398 (48%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 292 QAMECTVAQYFKQKYSLQLKHP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 350
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEG 312
S +++ + + D E +++++SN +P L+ GI +++ ++ G
Sbjct: 351 TSTMIKATARS--------APDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTG 402
Query: 313 RILSAPR---------IFVPAAKIDHWAVANFSGGCDIR----------SLCR-DLIR-F 351
R+L AP + P+ + F G +I+ CR DL++ F
Sbjct: 403 RVLPAPMLQYGGRNKTVATPSQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSF 462
Query: 352 -GEMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF+ +K + ++ +LP + +
Sbjct: 463 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--T 518
Query: 410 DLYGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LK+NAKLGG+N++L Q
Sbjct: 519 PVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKMNAKLGGINNVLVPHQR--- 575
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q+++ E+
Sbjct: 576 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEITQE 633
Query: 526 L-FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L + +D + RELL+ FYKS+ + KP++II +R
Sbjct: 634 LLYSQEVVQDLTSMARELLIQFYKST-RFKPTRIIYYR 670
Score = 64 (27.6 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 167 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDV 209
>UNIPROTKB|F1P3Z0 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 IPI:IPI00594029 OMA:GRSMPEP EMBL:AADN02043844
Ensembl:ENSGALT00000003527 Uniprot:F1P3Z0
Length = 860
Score = 319 (117.4 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 113/393 (28%), Positives = 184/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS D++P ++ + A V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYDADPFVQEFQFKVRDEMAHVTGRVLP 415
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 416 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 532 EVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------ASMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 58 (25.5 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>UNIPROTKB|F1RSJ1 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0045947 GO:GO:0009791 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0005844
GO:GO:0035278 GeneTree:ENSGT00640000091310 GO:GO:0035197
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:CU571011
Ensembl:ENSSSCT00000006516 OMA:VQTHRQE Uniprot:F1RSJ1
Length = 666
Score = 318 (117.0 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 114/393 (29%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 233 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 291
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 292 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 343
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 344 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 403
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 404 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 459
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 460 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 516
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 517 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 571
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 572 ------AAMVRELLIQFYKST-RFKPTRIIFYR 597
Score = 54 (24.1 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 106 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 148
>UNIPROTKB|F1NL39 [details] [associations]
symbol:LOC100858102 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005845 "mRNA cap binding complex"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0045947
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0035197 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 OMA:AIKWMSC EMBL:AADN02037477 EMBL:AADN02037478
IPI:IPI00572529 Ensembl:ENSGALT00000026092 Uniprot:F1NL39
Length = 856
Score = 319 (117.4 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 114/400 (28%), Positives = 190/400 (47%)
Query: 190 RNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKA 249
+ ++ + V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K
Sbjct: 294 QQENGQTVECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKK 352
Query: 250 LTVFQRSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQ 309
LT Q S ++ + + D E +++MRS +++P +R GI +
Sbjct: 353 LTDNQTSTMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTD 404
Query: 310 VEGRILSAPRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--L 348
V GR+L P I A + W + N F G +I+ C + L
Sbjct: 405 VTGRVLQPPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHL 464
Query: 349 IRFGE-MKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDR 406
F E +++IS + + + P F + A V+ MF +K + ++ +LP +
Sbjct: 465 KTFTEQLRKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYTGLQ-LVVVILPGK 522
Query: 407 KDSDLYGSWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQS 463
+ +Y KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q
Sbjct: 523 --TPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQG 579
Query: 464 KNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEM 522
+ P V + P I G DV+H G + P +RY A+VR Q + E+
Sbjct: 580 R--PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEI 635
Query: 523 IDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
I L A +VRELL+ FYKS+ + KP++II +R
Sbjct: 636 IQDL---------AAMVRELLIQFYKST-RFKPTRIIFYR 665
Score = 54 (24.1 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 174 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 216
Score = 42 (19.8 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G K+L+T+ ALP K+E V L
Sbjct: 93 GRKNLYTVMALPIVTDKVELEVTL 116
>UNIPROTKB|Q5TA58 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 UniGene:Hs.22867
HGNC:HGNC:3262 OrthoDB:EOG4229J0 ChiTaRS:EIF2C1 HOVERGEN:HBG006101
GO:GO:0003743 IPI:IPI00646765 SMR:Q5TA58 STRING:Q5TA58
Ensembl:ENST00000373206 Uniprot:Q5TA58
Length = 782
Score = 306 (112.8 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 227 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 285
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 286 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 337
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 338 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 397
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 398 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 453
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 454 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 510
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 511 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 565
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 566 ------SYMVRELLIQFYKST-RFKPTRIIFYR 591
Score = 62 (26.9 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 100 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 142
Score = 46 (21.3 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 19 GKKNIYTVTALPIGNERVDFEVTI 42
>UNIPROTKB|Q5ZLG4 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035278 HSSP:Q9UL18 CTD:192669 GO:GO:0006402
EMBL:AJ719770 IPI:IPI00594029 RefSeq:NP_001026071.1
UniGene:Gga.22391 ProteinModelPortal:Q5ZLG4 SMR:Q5ZLG4
STRING:Q5ZLG4 PRIDE:Q5ZLG4 GeneID:419628 KEGG:gga:419628
InParanoid:Q5ZLG4 NextBio:20822658 Uniprot:Q5ZLG4
Length = 860
Score = 317 (116.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 113/393 (28%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS D++P ++ + A V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYDADPFVQEFQFKVRDEMAHVTGRVLP 415
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 416 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V MF +K + ++ +LP + + +Y
Sbjct: 476 RKISKDAGMPI-QGQPCFCKYAQGADSVGPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 532 EVKRAGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------ASMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 58 (25.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>UNIPROTKB|Q6T5B7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic
process" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035278 HSSP:Q9UL18 EMBL:AY436348 IPI:IPI00697621
RefSeq:NP_001001133.1 UniGene:Bt.47704 STRING:Q6T5B7 GeneID:406231
KEGG:bta:406231 CTD:192669 InParanoid:Q6T5B7 NextBio:20817875
GO:GO:0006402 Uniprot:Q6T5B7
Length = 861
Score = 317 (116.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 112/397 (28%), Positives = 186/397 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +++P ++ + A V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLP 415
Query: 317 APRI-----------------------FVPAAKIDHWAVANFSGGCDIRSLCRDLIRFG- 352
AP + F +I+ WA+A F+ + CR+ I G
Sbjct: 416 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIEMWAIACFA----TQRQCREEILKGF 471
Query: 353 --EMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDS 409
++++IS + + + P F + A V+ MF +K + ++ +LP + +
Sbjct: 472 TDQLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--T 527
Query: 410 DLYGSWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNL 466
+Y KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q
Sbjct: 528 PVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR--- 584
Query: 467 PLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDS 525
P V + P I G DV+H G + P SRY A+VR Q + E+I
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQD 642
Query: 526 LFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
L A +VRELL+ FYKS+ + KP++II +R
Sbjct: 643 L---------ASMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 58 (25.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>ZFIN|ZDB-GENE-060503-452 [details] [associations]
symbol:ago3b "argonaute RISC catalytic component
3b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:JX448394
Uniprot:K4IKE9
Length = 867
Score = 213 (80.0 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 76/250 (30%), Positives = 119/250 (47%)
Query: 321 FVPAAKIDHWAVANFSGGCDIRSLCRDLIRFG---EMKRISTSPPLNVFEENPQF-RRAP 376
F +I WA+A F+ + CR+ + G ++++IS + + + P F + A
Sbjct: 450 FHTGVEIKMWAIACFA----TQRQCREEVLKGFTDQLRKISKDAGMPI-QGQPCFCKYAQ 504
Query: 377 APVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAP---T 433
V+ MF +K + ++ +LP + + +Y KR + G+ QC+
Sbjct: 505 GADNVEPMFRHLKNTYAGLQ-LIIVILPGK--TPVYAEVKRVGDTLLGMATQCVQVKNVV 561
Query: 434 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXX 493
K + Q L N+ LKIN KLGG+N++L Q P V + P I G DV+H G
Sbjct: 562 KTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVFQQPVIFLGADVTHPPAGDGKKPS 618
Query: 494 XXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQ 552
+ P SRY A+VR Q + E+I L A +VRELL+ FYKS+
Sbjct: 619 IAAVVGSMDAHP--SRYCATVRVQRPRQEVIQDL---------ASMVRELLIQFYKST-H 666
Query: 553 TKPSQIIIFR 562
KP++II +R
Sbjct: 667 YKPTRIIFYR 676
Score = 157 (60.3 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +S+P ++ + A+V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYNSDPFVQEFQFRVRDEMAEVTGRVLP 415
Query: 317 APRI 320
AP +
Sbjct: 416 APML 419
Score = 59 (25.8 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFFSS-PEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
Score = 47 (21.6 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATS 138
GQE +++ V +I+ Q K + D+++ ++ AT+
Sbjct: 332 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATA 370
Score = 37 (18.1 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 22 GEKSLFTISALP 33
G+KSL+T LP
Sbjct: 88 GKKSLYTAQPLP 99
>UNIPROTKB|F1P3Y9 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005844 "polysome" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:AADN02043843
EMBL:AADN02043844 IPI:IPI00597606 Ensembl:ENSGALT00000003529
Uniprot:F1P3Y9
Length = 853
Score = 306 (112.8 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 296 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 354
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 355 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 406
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 407 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 466
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 467 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 522
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 523 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 579
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 580 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 634
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 635 ------SYMVRELLIQFYKST-RFKPTRIIFYR 660
Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 169 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 211
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 88 GKKNIYTVTALPIGNERVDFEVTI 111
>UNIPROTKB|F1PGP5 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
GeneTree:ENSGT00640000091310 EMBL:AAEX03009640 EMBL:AAEX03009639
RefSeq:XP_532563.3 ProteinModelPortal:F1PGP5
Ensembl:ENSCAFT00000005625 GeneID:475337 KEGG:cfa:475337
OMA:XGEGSHI Uniprot:F1PGP5
Length = 857
Score = 306 (112.8 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 302 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 360
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 361 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 412
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 413 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 472
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 473 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 528
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 529 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 585
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 586 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 640
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 641 ------SYMVRELLIQFYKST-RFKPTRIIFYR 666
Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 175 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 217
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 94 GKKNIYTVTALPIGNERVDFEVTI 117
>UNIPROTKB|Q9UL18 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=IDA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005844 "polysome" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
GO:GO:0006355 GO:GO:0007219 GO:GO:0006351 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AF093097
EMBL:AL139286 EMBL:BC063275 IPI:IPI00007736 RefSeq:NP_036331.1
UniGene:Hs.22867 PDB:1SI2 PDB:1SI3 PDBsum:1SI2 PDBsum:1SI3
ProteinModelPortal:Q9UL18 SMR:Q9UL18 DIP:DIP-29193N IntAct:Q9UL18
STRING:Q9UL18 PhosphoSite:Q9UL18 DMDM:88984241 PaxDb:Q9UL18
PRIDE:Q9UL18 Ensembl:ENST00000373204 GeneID:26523 KEGG:hsa:26523
UCSC:uc001bzk.3 CTD:26523 GeneCards:GC01P036335 HGNC:HGNC:3262
MIM:606228 neXtProt:NX_Q9UL18 PharmGKB:PA27693 InParanoid:Q9UL18
OMA:NNLVKRA OrthoDB:EOG4229J0 PhylomeDB:Q9UL18 ChiTaRS:EIF2C1
EvolutionaryTrace:Q9UL18 GenomeRNAi:26523 NextBio:48846
ArrayExpress:Q9UL18 Bgee:Q9UL18 CleanEx:HS_EIF2C1
Genevestigator:Q9UL18 GermOnline:ENSG00000092847 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
Uniprot:Q9UL18
Length = 857
Score = 306 (112.8 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 302 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 360
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 361 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 412
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 413 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 472
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 473 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 528
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 529 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 585
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 586 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 640
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 641 ------SYMVRELLIQFYKST-RFKPTRIIFYR 666
Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 175 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 217
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 94 GKKNIYTVTALPIGNERVDFEVTI 117
>UNIPROTKB|F1SV63 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
GeneTree:ENSGT00640000091310 OMA:XGEGSHI EMBL:AEMK01190523
EMBL:CU929817 ProteinModelPortal:F1SV63 SMR:F1SV63 PRIDE:F1SV63
Ensembl:ENSSSCT00000004026 Uniprot:F1SV63
Length = 857
Score = 306 (112.8 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 302 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 360
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 361 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 412
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 413 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 472
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 473 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 528
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 529 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 585
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 586 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 640
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 641 ------SYMVRELLIQFYKST-RFKPTRIIFYR 666
Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 175 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 217
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 94 GKKNIYTVTALPIGNERVDFEVTI 117
>MGI|MGI:2446630 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic subunit 1"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005844 "polysome" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO;IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446630
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 CTD:26523 OMA:NNLVKRA
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0005844
GO:GO:0035278 GO:GO:0000956 EMBL:AB081471 EMBL:AL606935
EMBL:AL606976 EMBL:BC129914 IPI:IPI00943422 RefSeq:NP_700452.2
UniGene:Mm.30800 ProteinModelPortal:Q8CJG1 SMR:Q8CJG1 IntAct:Q8CJG1
STRING:Q8CJG1 PhosphoSite:Q8CJG1 PaxDb:Q8CJG1 PRIDE:Q8CJG1
Ensembl:ENSMUST00000097888 GeneID:236511 KEGG:mmu:236511
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 InParanoid:A1L365
NextBio:382987 Bgee:Q8CJG1 CleanEx:MM_EIF2C1 Genevestigator:Q8CJG1
Uniprot:Q8CJG1
Length = 857
Score = 306 (112.8 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 302 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 360
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 361 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 412
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 413 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 472
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 473 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 528
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 529 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 585
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 586 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 640
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 641 ------SYMVRELLIQFYKST-RFKPTRIIFYR 666
Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 175 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 217
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 94 GKKNIYTVTALPIGNERVDFEVTI 117
>RGD|1304619 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic component 1" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA;ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304619
GO:GO:0005737 GO:GO:0003723 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
OMA:NNLVKRA OrthoDB:EOG4229J0 GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 IPI:IPI00359345
RefSeq:NP_001178694.1 UniGene:Rn.62413 Ensembl:ENSRNOT00000037728
GeneID:313594 KEGG:rno:313594 UCSC:RGD:1304619 NextBio:666514
Uniprot:D4AC38
Length = 857
Score = 306 (112.8 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 302 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 360
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 361 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 412
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 413 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 472
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 473 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 528
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 529 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 585
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 586 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 640
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 641 ------SYMVRELLIQFYKST-RFKPTRIIFYR 666
Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 175 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 217
Score = 46 (21.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 94 GKKNIYTVTALPIGNERVDFEVTI 117
>UNIPROTKB|F1MXX2 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:DAAA02009205
IPI:IPI00686174 Ensembl:ENSBTAT00000016254 Uniprot:F1MXX2
Length = 877
Score = 306 (112.8 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 109/393 (27%), Positives = 183/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 322 VECTVAQYFKQKYNLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 380
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E +++M++ + +P ++ GI + +V GR+L
Sbjct: 381 TMIKATARS--------APDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLP 432
Query: 317 AP---------RIFVPAAKIDHWAVANFSGGCDIR----------SLCRD--LIRF-GEM 354
AP I P + F G +I+ CR+ L F ++
Sbjct: 433 APILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQL 492
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 493 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 548
Query: 414 SWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q V
Sbjct: 549 EVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRS---AVF 605
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I+ L
Sbjct: 606 QQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHP--SRYCATVRVQRPRQEIIEDL--- 660
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 661 ------SYMVRELLIQFYKST-RFKPTRIIFYR 686
Score = 62 (26.9 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 195 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 237
Score = 46 (21.3 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 8/24 (33%), Positives = 20/24 (83%)
Query: 22 GEKSLFTISALP--HKKMEFLVLL 43
G+K+++T++ALP +++++F V +
Sbjct: 114 GKKNIYTVTALPIGNERVDFEVTI 137
>UNIPROTKB|Q9UKV8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA"
evidence=IDA;IMP] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IDA;IMP] [GO:0005845
"mRNA cap binding complex" evidence=IDA] [GO:0045947 "negative
regulation of translational initiation" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0031054 "pre-miRNA processing"
evidence=IDA] [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IDA] [GO:0000340 "RNA 7-methylguanosine
cap binding" evidence=IDA] [GO:0016442 "RNA-induced silencing
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005844 "polysome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0004521 "endoribonuclease activity" evidence=EXP] [GO:0005829
"cytosol" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0006413 "translational initiation" evidence=NAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0046872 GO:GO:0045947
GO:GO:0007219 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AC067931 EMBL:AC107375
EMBL:BC007633 EMBL:BC018727 EMBL:BC125214 EMBL:AY077717
EMBL:BT007229 EMBL:AF121255 IPI:IPI00745433 IPI:IPI00929290
RefSeq:NP_001158095.1 RefSeq:NP_036286.2 UniGene:Hs.449415 PDB:3LUC
PDB:3LUD PDB:3LUG PDB:3LUH PDB:3LUJ PDB:3LUK PDB:3QX8 PDB:3QX9
PDB:4EI1 PDB:4EI3 PDB:4F3T PDBsum:3LUC PDBsum:3LUD PDBsum:3LUG
PDBsum:3LUH PDBsum:3LUJ PDBsum:3LUK PDBsum:3QX8 PDBsum:3QX9
PDBsum:4EI1 PDBsum:4EI3 PDBsum:4F3T ProteinModelPortal:Q9UKV8
SMR:Q9UKV8 DIP:DIP-29194N IntAct:Q9UKV8 MINT:MINT-1957975
STRING:Q9UKV8 PhosphoSite:Q9UKV8 DMDM:229463006 PaxDb:Q9UKV8
PRIDE:Q9UKV8 DNASU:27161 Ensembl:ENST00000220592
Ensembl:ENST00000519980 GeneID:27161 KEGG:hsa:27161 UCSC:uc003yvn.3
UCSC:uc010meo.3 GeneCards:GC08M141541 HGNC:HGNC:3263 HPA:CAB019309
MIM:606229 neXtProt:NX_Q9UKV8 PharmGKB:PA27694 InParanoid:Q9UKV8
OMA:AIKWMSC PhylomeDB:Q9UKV8 ChiTaRS:EIF2C2
EvolutionaryTrace:Q9UKV8 GenomeRNAi:27161 NextBio:49946
ArrayExpress:Q9UKV8 Bgee:Q9UKV8 CleanEx:HS_EIF2C2
Genevestigator:Q9UKV8 GermOnline:ENSG00000123908 GO:GO:0003743
Uniprot:Q9UKV8
Length = 859
Score = 318 (117.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 114/393 (29%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 304 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 362
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 363 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 414
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 415 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 474
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 475 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 530
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 531 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 587
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 588 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 642
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 643 ------AAMVRELLIQFYKST-RFKPTRIIFYR 668
Score = 54 (24.1 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 177 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 219
>UNIPROTKB|B0JYP5 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0045947 GO:GO:0009791
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
IPI:IPI00704677 UniGene:Bt.21912 GO:GO:0005845 GO:GO:0016442
GO:GO:0070551 GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC
GO:GO:0003743 EMBL:DAAA02037528 EMBL:DAAA02037529 EMBL:DAAA02037530
EMBL:BC151491 SMR:B0JYP5 STRING:B0JYP5 Ensembl:ENSBTAT00000002068
InParanoid:B0JYP5 Uniprot:B0JYP5
Length = 860
Score = 318 (117.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 114/393 (29%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 364 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 415
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 416 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 532 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------AAMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 54 (24.1 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 178 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 220
>MGI|MGI:2446632 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic subunit 2"
species:10090 "Mus musculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISO;IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003729
"mRNA binding" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=ISO] [GO:0005845 "mRNA cap binding complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=IMP] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016442 "RNA-induced
silencing complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA
processing" evidence=ISO] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0035197 "siRNA binding"
evidence=ISO] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISO] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA" evidence=ISO]
[GO:0045947 "negative regulation of translational initiation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446632
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0003729 GO:GO:0006351 GO:GO:0009791
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC EMBL:AB081472 EMBL:BC096465
EMBL:BC128379 EMBL:BC129922 EMBL:AK220193 IPI:IPI00229988
RefSeq:NP_694818.3 UniGene:Mm.23095 UniGene:Mm.391971
UniGene:Mm.440409 UniGene:Mm.476931 UniGene:Mm.486474
UniGene:Mm.490340 ProteinModelPortal:Q8CJG0 SMR:Q8CJG0
DIP:DIP-35014N IntAct:Q8CJG0 STRING:Q8CJG0 PhosphoSite:Q8CJG0
PaxDb:Q8CJG0 PRIDE:Q8CJG0 Ensembl:ENSMUST00000044113 GeneID:239528
KEGG:mmu:239528 InParanoid:A1A563 NextBio:384151 Bgee:Q8CJG0
CleanEx:MM_EIF2C2 Genevestigator:Q8CJG0
GermOnline:ENSMUSG00000036698 Uniprot:Q8CJG0
Length = 860
Score = 318 (117.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 114/393 (29%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 364 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 415
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 416 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 532 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------AAMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 54 (24.1 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 178 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 220
>RGD|621255 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic component 2" species:10116
"Rattus norvegicus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA;ISO;ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003729
"mRNA binding" evidence=IEA;ISO] [GO:0004521 "endoribonuclease
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=IEA;ISO;ISS] [GO:0005845 "mRNA cap binding complex"
evidence=IEA;ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0031054
"pre-miRNA processing" evidence=IEA;ISO;ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO;ISS] [GO:0035197
"siRNA binding" evidence=IEA;ISO;ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA;ISO;ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA;ISO;ISS] [GO:0045947 "negative
regulation of translational initiation" evidence=IEA;ISO;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA;ISO;ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:621255
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AF195534 IPI:IPI00214529
RefSeq:NP_067608.1 UniGene:Rn.35512 ProteinModelPortal:Q9QZ81
SMR:Q9QZ81 STRING:Q9QZ81 GeneID:59117 KEGG:rno:59117
UCSC:RGD:621255 InParanoid:Q9QZ81 NextBio:611775
ArrayExpress:Q9QZ81 Genevestigator:Q9QZ81
GermOnline:ENSRNOG00000008533 Uniprot:Q9QZ81
Length = 860
Score = 318 (117.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 114/393 (29%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 364 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 415
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 416 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 532 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------AAMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 54 (24.1 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 178 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 220
>UNIPROTKB|F1LUS2 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:IKLEAEY IPI:IPI00359343
Ensembl:ENSRNOT00000042371 ArrayExpress:F1LUS2 Uniprot:F1LUS2
Length = 854
Score = 314 (115.6 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 112/393 (28%), Positives = 184/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 299 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 357
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +++P ++ + A V GR+L
Sbjct: 358 TMIKATARS--------APDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLP 409
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 410 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 469
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 470 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 525
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 526 EVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 582
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 583 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 637
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 638 ------ASMVRELLIQFYKST-RFKPTRIIFYR 663
Score = 58 (25.5 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 172 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 214
>UNIPROTKB|F1MG44 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
IPI:IPI00697621 GO:GO:0006402 OMA:IKLEAEY EMBL:DAAA02009205
ProteinModelPortal:F1MG44 Ensembl:ENSBTAT00000024385 Uniprot:F1MG44
Length = 860
Score = 314 (115.6 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 112/393 (28%), Positives = 184/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +++P ++ + A V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLP 415
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 416 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 532 EVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------ASMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 58 (25.5 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>UNIPROTKB|E2R0U1 [details] [associations]
symbol:EIF2C3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:GRSMPEP EMBL:AAEX03009638
Ensembl:ENSCAFT00000005611 Uniprot:E2R0U1
Length = 860
Score = 314 (115.6 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 112/393 (28%), Positives = 184/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +++P ++ + A V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLP 415
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 416 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 532 EVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAFVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------ASMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 58 (25.5 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>UNIPROTKB|Q9H9G7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0010467 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 CTD:192669 GO:GO:0006402
EMBL:AK022827 EMBL:AL138787 EMBL:BC025769 IPI:IPI00304181
IPI:IPI00551009 RefSeq:NP_079128.2 RefSeq:NP_803171.1
UniGene:Hs.657659 ProteinModelPortal:Q9H9G7 SMR:Q9H9G7
DIP:DIP-54486N IntAct:Q9H9G7 STRING:Q9H9G7 PhosphoSite:Q9H9G7
DMDM:76803660 PaxDb:Q9H9G7 PRIDE:Q9H9G7 DNASU:192669
Ensembl:ENST00000246314 Ensembl:ENST00000373191 GeneID:192669
KEGG:hsa:192669 UCSC:uc001bzp.3 GeneCards:GC01P036396
HGNC:HGNC:18421 HPA:HPA048342 MIM:607355 neXtProt:NX_Q9H9G7
PharmGKB:PA38329 InParanoid:Q9H9G7 OMA:IKLEAEY PhylomeDB:Q9H9G7
ChiTaRS:EIF2C3 GenomeRNAi:192669 NextBio:89367 ArrayExpress:Q9H9G7
Bgee:Q9H9G7 CleanEx:HS_EIF2C3 Genevestigator:Q9H9G7
GermOnline:ENSG00000126070 Uniprot:Q9H9G7
Length = 860
Score = 314 (115.6 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 112/393 (28%), Positives = 184/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +++P ++ + A V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLP 415
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 416 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 532 EVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------ASMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 58 (25.5 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>MGI|MGI:2446634 [details] [associations]
symbol:Ago3 "argonaute RISC catalytic subunit 3"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446634
EMBL:CH466552 GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895
HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606976 GeneTree:ENSGT00640000091310
HOVERGEN:HBG006101 CTD:192669 GO:GO:0006402 EMBL:AB081473
EMBL:AK154436 EMBL:AK171118 EMBL:BC137964 IPI:IPI00229987
RefSeq:NP_700451.2 UniGene:Mm.440915 UniGene:Mm.482388
UniGene:Mm.483093 ProteinModelPortal:Q8CJF9 SMR:Q8CJF9
STRING:Q8CJF9 PhosphoSite:Q8CJF9 PaxDb:Q8CJF9 PRIDE:Q8CJF9
Ensembl:ENSMUST00000069097 GeneID:214150 KEGG:mmu:214150
InParanoid:Q3TBP7 OMA:GRSMPEP NextBio:374206 Bgee:Q8CJF9
CleanEx:MM_EIF2C3 Genevestigator:Q8CJF9
GermOnline:ENSMUSG00000028842 Uniprot:Q8CJF9
Length = 860
Score = 314 (115.6 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 112/393 (28%), Positives = 184/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +++P ++ + A V GR+L
Sbjct: 364 TMIKATARS--------APDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLP 415
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 416 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 532 EVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------ASMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 58 (25.5 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 178 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>FB|FBgn0262739 [details] [associations]
symbol:AGO1 "Argonaute-1" species:7227 "Drosophila
melanogaster" [GO:0005850 "eukaryotic translation initiation factor
2 complex" evidence=ISS] [GO:0016442 "RNA-induced silencing
complex" evidence=ISS] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=IMP] [GO:0030423 "targeting of mRNA
for destruction involved in RNA interference" evidence=IMP]
[GO:0016246 "RNA interference" evidence=TAS] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IDA;IMP]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0035195 "gene silencing by miRNA" evidence=IMP;NAS] [GO:0007416
"synapse assembly" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0007367 "segment polarity
determination" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006402 "mRNA catabolic process"
evidence=IGI;IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0036099 "female germ-line stem cell maintenance" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 EMBL:AE013599
GO:GO:0005634 GO:GO:0048471 GO:GO:0007294 GO:GO:0007416
GO:GO:0030529 SUPFAM:SSF53098 GO:GO:0006342 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OMA:NNLVKRA
ChiTaRS:EIF2C1 GO:GO:0035279 GeneTree:ENSGT00640000091312
GO:GO:0030422 GO:GO:0007367 GO:GO:0030423 GO:GO:0006402
GO:GO:0030727 GO:GO:0035196 GO:GO:0036099 FlyBase:FBgn0262739
EMBL:BT023945 EMBL:BT125895 RefSeq:NP_001246314.1
RefSeq:NP_725341.1 RefSeq:NP_725342.1 UniGene:Dm.7398 PDB:1R4K
PDBsum:1R4K SMR:Q32KD4 DIP:DIP-59685N IntAct:Q32KD4 STRING:Q32KD4
EnsemblMetazoa:FBtr0087612 EnsemblMetazoa:FBtr0087613
EnsemblMetazoa:FBtr0305592 GeneID:36544 KEGG:dme:Dmel_CG6671
UCSC:CG6671-RA CTD:36544 InParanoid:Q32KD4 EvolutionaryTrace:Q32KD4
GenomeRNAi:36544 NextBio:799120 Uniprot:Q32KD4
Length = 984
Score = 305 (112.4 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 116/400 (29%), Positives = 188/400 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF++ R+ L + PC+ VG+ K TY+P+E+C++++ QR K LT Q S
Sbjct: 413 VECTVAKYFLDKYRMKLRYP-HLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKKLTDMQTS 471
Query: 257 ALVEKSQQK-PQEKMKI---ITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEG 312
+++ + + P + +I + + + V S M+ G + Q G
Sbjct: 472 TMIKATARSAPDREREINNLVKRADFNNDSYVQEFGLTISNSMMEVRGRVLPPPKLQYGG 531
Query: 313 RI---LSAPRIFVPAAKIDH-------WAVAN--FSGGCDIRS---LC--------RDLI 349
R+ L+ ++F P K+ W + F G +IR C D +
Sbjct: 532 RVSTGLTGQQLFPPQNKVSLASPNQGVWDMRGKQFFTGVEIRIWAIACFAPQRTVREDAL 591
Query: 350 R-FGE-MKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDR 406
R F + +++IS + + + P F + A P +V+ MF +K F ++ +LP +
Sbjct: 592 RNFTQQLQKISNDAGMPIIGQ-PCFCKYATGPDQVEPMFRYLKITFPGLQ-LVVVVLPGK 649
Query: 407 KDSDLYGSWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQS 463
+ +Y KR + G+ QC+ VN+ Q L N+ LKIN KLGG+NS+L +
Sbjct: 650 --TPVYAEVKRVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLGGINSIL-VPSI 706
Query: 464 KNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEM 522
+ P V P I G DV+H G + P SRY A+VR Q + E+
Sbjct: 707 R--PKVFNEPVIFLGADVTHPPAGDNKKPSIAAVVGSMDAHP--SRYAATVRVQQHRQEI 762
Query: 523 IDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
I L + +VRELL+ FYKS+G KP +II++R
Sbjct: 763 IQEL---------SSMVRELLIMFYKSTGGYKPHRIILYR 793
Score = 70 (29.7 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + + LGGG +GFH S + +Q + LNI V
Sbjct: 286 VGRSFFSSPEGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDV 328
>UNIPROTKB|Q6QME8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005844 "polysome" evidence=ISS] [GO:0035197
"siRNA binding" evidence=ISS] [GO:0070551 "endoribonuclease
activity, cleaving siRNA-paired mRNA" evidence=ISS] [GO:0031054
"pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0005845 "mRNA
cap binding complex" evidence=ISS] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0045947 GO:GO:0006351 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197
EMBL:AY533678 IPI:IPI00704677 RefSeq:NP_991363.1 UniGene:Bt.21912
ProteinModelPortal:Q6QME8 SMR:Q6QME8 STRING:Q6QME8 PRIDE:Q6QME8
GeneID:404130 KEGG:bta:404130 CTD:27161 InParanoid:Q6QME8
NextBio:20817567 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 Uniprot:Q6QME8
Length = 860
Score = 317 (116.6 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 114/393 (29%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 305 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 363
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 364 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 415
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 416 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 475
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 476 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 531
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 532 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLWLKINVKLGGVNNIL-LPQGR--PPVF 588
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 589 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 643
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 644 ------AAMVRELLIQFYKST-RFKPTRIIFYR 669
Score = 54 (24.1 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 178 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 220
>UNIPROTKB|F1PQZ7 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AAEX03008878
Ensembl:ENSCAFT00000001857 OMA:CQRPREQ Uniprot:F1PQZ7
Length = 813
Score = 316 (116.3 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 114/393 (29%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 258 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 316
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 317 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 368
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 369 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 428
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 429 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 484
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 485 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 541
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 542 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 596
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 597 ------ATMVRELLIQFYKST-RFKPTRIIFYR 622
Score = 54 (24.1 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 131 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 173
>UNIPROTKB|O77503 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9986
"Oryctolagus cuniculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005844 "polysome" evidence=ISS]
[GO:0005845 "mRNA cap binding complex" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0031054 "pre-miRNA
processing" evidence=ISS] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISS] [GO:0035197 "siRNA binding" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0045947
"negative regulation of translational initiation" evidence=ISS]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0045947 GO:GO:0006351
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 EMBL:AF005355 PIR:PC6505
RefSeq:NP_001076179.1 UniGene:Ocu.1816 ProteinModelPortal:O77503
SMR:O77503 STRING:O77503 GeneID:100009457 Uniprot:O77503
Length = 840
Score = 315 (115.9 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 114/393 (29%), Positives = 185/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 285 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 343
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 344 TMIRATARS--------APDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQ 395
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 396 PPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQL 455
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V MF +K + ++ +LP + + +Y
Sbjct: 456 RKISRDAGMPI-QGQPCFCKYAQGADSVGPMFRHLKNTYAGLQ-LVVVILPGK--TPVYA 511
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 512 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 568
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 569 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 623
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 624 ------AAMVRELLIQFYKST-RFKPTRIIFYR 649
Score = 54 (24.1 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 158 VGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDV 200
>UNIPROTKB|Q6DCX2 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8355 "Xenopus
laevis" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=ISS] [GO:0005845 "mRNA cap binding complex" evidence=ISS]
[GO:0016442 "RNA-induced silencing complex" evidence=ISS]
[GO:0031054 "pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0035197 "siRNA
binding" evidence=ISS] [GO:0035278 "negative regulation of
translation involved in gene silencing by miRNA" evidence=ISS]
[GO:0035279 "mRNA cleavage involved in gene silencing by miRNA"
evidence=ISS] [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0070551 "endoribonuclease activity,
cleaving siRNA-paired mRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0046872 GO:GO:0045947 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GO:GO:0035278 GO:GO:0035197 CTD:27161 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 EMBL:BC077863 RefSeq:NP_001086988.1 UniGene:Xl.43287
HSSP:Q9UL18 ProteinModelPortal:Q6DCX2 SMR:Q6DCX2 GeneID:446823
KEGG:xla:446823 Xenbase:XB-GENE-1001922 Uniprot:Q6DCX2
Length = 862
Score = 314 (115.6 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 113/393 (28%), Positives = 186/393 (47%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 307 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 365
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 366 TMIRATARS--------APDRQEEISKLMRSASFNTDPFVREFGIMVKDDMTDVTGRVLQ 417
Query: 317 APRIFVP------AAKIDH-WAVAN--FSGGCDIR----------SLCRD--LIRFGE-M 354
P I A + W + N F G +I+ C + L F E +
Sbjct: 418 PPSILYGGRSKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKTFTEQL 477
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 478 RKISRDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYTGLQ-LVVVILPGK--TPVYA 533
Query: 414 SWKRKTLSEFGIFNQCLAPTKVNE---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ V Q L N+ LKIN KLGG+N++L + Q + P V
Sbjct: 534 EVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVF 590
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P +RY A+VR Q + E+I L
Sbjct: 591 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--NRYCATVRVQQHRQEIIQDL--- 645
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
+ +VRELL+ FYKS+ + KP++II +R
Sbjct: 646 ------SAMVRELLIQFYKST-RFKPTRIIFYR 671
Score = 54 (24.1 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 180 VGRSFFTASEGCANPLGGGREVWFGFHQSVRPSLWKMMLNIDV 222
>UNIPROTKB|I3L5V9 [details] [associations]
symbol:EIF2C3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0006402 "mRNA catabolic
process" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003676
SUPFAM:SSF53098 SUPFAM:SSF101690 GeneTree:ENSGT00640000091310
EMBL:FP236308 Ensembl:ENSSSCT00000030097 OMA:GITHATE Uniprot:I3L5V9
Length = 543
Score = 314 (115.6 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 112/393 (28%), Positives = 184/393 (46%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 86 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 144
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
+++ + + D E ++++RS +++P ++ + A V GR+L
Sbjct: 145 TMIKATARS--------APDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLP 196
Query: 317 APRIFV-----PAAKIDH--WAVAN--FSGGCDIRSL----------CRDLIRFG---EM 354
AP + A H W + F G +I+ CR+ I G ++
Sbjct: 197 APMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQL 256
Query: 355 KRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYG 413
++IS + + + P F + A V+ MF +K + ++ +LP + + +Y
Sbjct: 257 RKISKDAGMPI-QGQPCFCKYAQGADSVEPMFRHLKNTYSGLQ-LIIVILPGK--TPVYA 312
Query: 414 SWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVS 470
KR + G+ QC+ K + Q L N+ LKIN KLGG+N++L Q P V
Sbjct: 313 EVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVF 369
Query: 471 KVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKP 529
+ P I G DV+H G + P SRY A+VR Q + E+I L
Sbjct: 370 QQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL--- 424
Query: 530 LPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A +VRELL+ FYKS+ + KP++II +R
Sbjct: 425 ------ASMVRELLIQFYKST-RFKPTRIIFYR 450
>UNIPROTKB|Q6DJB9 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005845 "mRNA cap binding complex"
evidence=ISS] [GO:0016442 "RNA-induced silencing complex"
evidence=ISS] [GO:0031054 "pre-miRNA processing" evidence=ISS]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=ISS]
[GO:0035197 "siRNA binding" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0045947 "negative regulation of
translational initiation" evidence=ISS] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0046872
GO:GO:0045947 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 HSSP:Q9UL18 EMBL:BC075263
RefSeq:NP_001004877.1 UniGene:Str.65293 ProteinModelPortal:Q6DJB9
SMR:Q6DJB9 STRING:Q6DJB9 GeneID:448205 KEGG:xtr:448205
Xenbase:XB-GENE-1001916 InParanoid:Q6DJB9 Bgee:Q6DJB9
Uniprot:Q6DJB9
Length = 871
Score = 192 (72.6 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 74/248 (29%), Positives = 118/248 (47%)
Query: 321 FVPAAKIDHWAVANFSGGCDIRSLCRDLIRFGE-MKRISTSPPLNVFEENPQF-RRAPAP 378
F +I WA+A F+ + L F E +++IS + + + P F + A
Sbjct: 454 FHTGIEIKVWAIACFAPQRQCTEV--HLKTFTEQLRKISRDAGMPI-QGQPCFCKYAQGA 510
Query: 379 VRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAPTKVNE- 437
V+ MF +K + ++ +LP + + +Y KR + G+ QC+ V
Sbjct: 511 DSVEPMFRHLKNTYTGLQ-LVVVILPGK--TPVYAEVKRVGDTVLGMATQCVQMKNVQRT 567
Query: 438 --QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXX 495
Q L N+ LKIN KLGG+N++L + Q + P V + P I G DV+H G
Sbjct: 568 TPQTLSNLCLKINVKLGGVNNIL-LPQGR--PPVFQQPVIFLGADVTHPPAGDGKKPSIA 624
Query: 496 XXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTK 554
+ P +RY A+VR Q + E+I L + +VRELL+ FYKS+ + K
Sbjct: 625 AVVGSMDAHP--NRYCATVRVQQHRQEIIQDL---------SAMVRELLIQFYKST-RFK 672
Query: 555 PSQIIIFR 562
P++II +R
Sbjct: 673 PTRIIFYR 680
Score = 168 (64.2 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 38/124 (30%), Positives = 66/124 (53%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + ++ L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 307 VECTVAQYFKDRHKLVLRYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 365
Query: 257 ALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
++ + + D E +++MRS +++P +R GI + V GR+L
Sbjct: 366 TMIRATARS--------APDRQEEISKLMRSASFNTDPFVREFGIMVKDDMTDVTGRVLQ 417
Query: 317 APRI 320
P I
Sbjct: 418 PPSI 421
Score = 54 (24.1 bits), Expect = 4.5e-25, Sum P(3) = 4.5e-25
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF LGGG +GFH S + + + LNI V
Sbjct: 180 VGRSFFTASEGCANPLGGGREVWFGFHQSVRPSLWKMMLNIDV 222
Score = 47 (21.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATS 138
GQE +++ V +I+ Q K + D+++ ++ AT+
Sbjct: 334 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATA 372
>TAIR|locus:2007111 [details] [associations]
symbol:AGO7 "ARGONAUTE7" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0016246 "RNA
interference" evidence=IEP] [GO:0035195 "gene silencing by miRNA"
evidence=TAS] [GO:0040034 "regulation of development,
heterochronic" evidence=IMP] [GO:0010050 "vegetative phase change"
evidence=IMP] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=IMP] [GO:0010599
"production of lsiRNA involved in RNA interference" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0006952 GO:GO:0006417 GO:GO:0006355
GO:GO:0006351 GO:GO:0003723 GO:GO:0030529 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC073178 EMBL:AY394564
IPI:IPI00543975 RefSeq:NP_177103.1 UniGene:At.35421
ProteinModelPortal:Q9C793 SMR:Q9C793 STRING:Q9C793
EnsemblPlants:AT1G69440.1 GeneID:843276 KEGG:ath:AT1G69440
TAIR:At1g69440 InParanoid:Q9C793 OMA:YSPVEFQ PhylomeDB:Q9C793
ProtClustDB:CLSN2682549 Genevestigator:Q9C793 GO:GO:0035195
GO:GO:0010492 GO:GO:0010599 GO:GO:0010267 GO:GO:0040034
GO:GO:0010050 Uniprot:Q9C793
Length = 990
Score = 278 (102.9 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 104/382 (27%), Positives = 174/382 (45%)
Query: 201 VFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSALVE 260
+ YF +H + F + PC+ + + R P Y+P+ELC + Q++ L+ Q + +++
Sbjct: 445 LMSYFKDHYGYEIQFK-NLPCLQISRAR-PCYLPMELCMICEGQKFLGKLSDDQAAKIMK 502
Query: 261 KSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISI-NSRFAQVEGRILSAPR 319
QKP E+ K I D M N+ + S +++ R Q L PR
Sbjct: 503 MGCQKPNER-KAIIDKVMTGSVGPSSGNQTREFNLEVSREMTLLKGRILQPPKLKLDRPR 561
Query: 320 ------IFVPAAKIDHWAVANFSGGCDIRSLCRDLIRFGEMKRISTSPPLNVF-EENPQF 372
+F +I+ WA+ + G D +S I E+ + L VF +N
Sbjct: 562 NLKESKVF-KGTRIERWALMSIGGSSDQKSTIPKFIN--ELTQ--KCEHLGVFLSKNTLS 616
Query: 373 RRAPAPVRVDRMFEQMKQKFEK--RPC-----FLLCLLPDRKDSDLYGSWKRKTLSEFGI 425
P + ++ K ++ R ++C++ ++K YG KR + + G+
Sbjct: 617 STFFEPSHILNNISLLESKLKEIQRAASNNLQLIICVM-EKKHKG-YGDLKRISETRIGV 674
Query: 426 FNQC-LAP--TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKV--PTIIFGMD 480
QC L P TK++ Q++ N+ LKINAK+GG + L ++P + + P I G D
Sbjct: 675 VTQCCLYPNITKLSSQFVSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGAD 734
Query: 481 VSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVR 540
V+H P NWP +RY + +RSQ+ + E+I L D +V+
Sbjct: 735 VTHPHPFDDCSPSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL--------DL-MVK 785
Query: 541 ELLVDFYKSSGQTKPSQIIIFR 562
ELL DFYK+ + P++II FR
Sbjct: 786 ELLDDFYKAVKKL-PNRIIFFR 806
Score = 81 (33.6 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 142 CFLVRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNI 185
C + +SF+ + ++GGG +G GF S + TQ GL+LN+
Sbjct: 314 CTSIGRSFYSSSMGGSKEIGGGAVGLRGFFQSLRHTQQGLALNM 357
>UNIPROTKB|D4A2P5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 RGD:1304583 GO:GO:0003723 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 IPI:IPI00950544
Ensembl:ENSRNOT00000066541 Uniprot:D4A2P5
Length = 995
Score = 205 (77.2 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 67/216 (31%), Positives = 109/216 (50%)
Query: 353 EMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDL 411
++++IS + + + P F + A V+ MF+ +K + ++ +LP + + +
Sbjct: 469 QLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--TPV 524
Query: 412 YGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPL 468
Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q P
Sbjct: 525 YAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR---PS 581
Query: 469 VSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDSL- 526
V + P I G DV+H G + P SRY A+VR Q+++ E+ L
Sbjct: 582 VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEIAQELL 639
Query: 527 FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
F +D + RELL+ FYKS+ + KP++II +R
Sbjct: 640 FSQEVVQDLTSMARELLIQFYKST-RFKPTRIIYYR 674
Score = 142 (55.0 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 30/103 (29%), Positives = 59/103 (57%)
Query: 220 PCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSALVEKSQQKPQEKMKIITDDSME 279
PC+ VG+ +K TY+P+E+C++++ QR K LT Q S +++ + + D E
Sbjct: 294 PCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARS--------APDRQE 345
Query: 280 HYAQVMRSNK--NDSEPMLRSCGISINSRFAQVEGRILSAPRI 320
+++++SN +P L+ GI +++ ++ GR+L AP +
Sbjct: 346 EISRLVKSNSVLGGPDPYLKEFGIVVHNEMTELMGRVLPAPML 388
Score = 62 (26.9 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 167 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 209
Score = 47 (21.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATS 138
GQE +++ V +I+ Q K + D+++ ++ AT+
Sbjct: 299 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATA 337
Score = 42 (19.8 bits), Expect = 5.8e-14, Sum P(4) = 5.8e-14
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 237 LCSLLSLQRY---TKALTVFQRSALVEKSQQKPQEK------MKIITDDSMEHY 281
+C +L +Q TK LT QR ++ + E + +IT+D+ EH+
Sbjct: 224 MCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHLKFGINLITEDTTEHH 277
Score = 37 (18.1 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILR 118
+ +TFKV + G S+ ++ + LD+I R
Sbjct: 114 KDQTFKVSVQWVSVVSLQLLLEALAGHLSEVPDDSVQALDVITR 157
>RGD|1304583 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic component 4" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006402 "mRNA catabolic process" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304583
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 IPI:IPI00390206 Ensembl:ENSRNOT00000035394
Uniprot:F1LVZ1
Length = 798
Score = 205 (77.2 bits), Expect = 2.2e-23, Sum P(4) = 2.2e-23
Identities = 67/216 (31%), Positives = 109/216 (50%)
Query: 353 EMKRISTSPPLNVFEENPQF-RRAPAPVRVDRMFEQMKQKFEKRPCFLLCLLPDRKDSDL 411
++++IS + + + P F + A V+ MF+ +K + ++ +LP + + +
Sbjct: 402 QLRKISKDAGMPI-QGQPCFCKYAQGADSVEPMFKHLKMTYVGLQ-LIVVILPGK--TPV 457
Query: 412 YGSWKRKTLSEFGIFNQCLAP---TKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPL 468
Y KR + G+ QC+ K + Q L N+ LKINAKLGG+N++L Q P
Sbjct: 458 YAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQR---PS 514
Query: 469 VSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNW-PILSRYRASVRSQSTKLEMIDSL- 526
V + P I G DV+H G + P SRY A+VR Q+++ E+ L
Sbjct: 515 VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHP--SRYCATVRVQTSRQEIAQELL 572
Query: 527 FKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
F +D + RELL+ FYKS+ + KP++II +R
Sbjct: 573 FSQEVVQDLTSMARELLIQFYKST-RFKPTRIIYYR 607
Score = 130 (50.8 bits), Expect = 2.2e-23, Sum P(4) = 2.2e-23
Identities = 31/113 (27%), Positives = 61/113 (53%)
Query: 195 KCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQ 254
+ ++ TV YF + L +S PC+ VG+ +K TY+P+E+C++++ QR K LT Q
Sbjct: 291 QAMECTVAQYFKQKYNLQLKYS-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ 349
Query: 255 RSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNK--NDSEPMLRSCGISINS 305
S +++ + + D E +++++SN +P L+ GI +++
Sbjct: 350 TSTMIKATARS--------APDRQEEISRLVKSNSVLGGPDPYLKEFGIVVHN 394
Score = 62 (26.9 bits), Expect = 2.2e-23, Sum P(4) = 2.2e-23
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 145 VRQSFFQNEPRSFFD-LGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P ++ LGGG +GFH S + + LNI V
Sbjct: 166 VGRSFF-SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 208
Score = 47 (21.6 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATS 138
GQE +++ V +I+ Q K + D+++ ++ AT+
Sbjct: 320 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATA 358
Score = 37 (18.1 bits), Expect = 2.2e-23, Sum P(4) = 2.2e-23
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 75 QSKTFKVEISVXXXXXXXXXXXXXHGQESQNSREAFRVLDIILR 118
+ +TFKV + G S+ ++ + LD+I R
Sbjct: 113 KDQTFKVSVQWVSVVSLQLLLEALAGHLSEVPDDSVQALDVITR 156
>UNIPROTKB|Q75HC2 [details] [associations]
symbol:AGO7 "Protein argonaute 7" species:39947 "Oryza
sativa Japonica Group" [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0016246
GO:GO:0003676 EMBL:DP000009 EMBL:AP008209 SUPFAM:SSF53098
eggNOG:NOG279895 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 HSSP:Q9UL18 OMA:YSPVEFQ ProtClustDB:CLSN2682549
GO:GO:0010492 GO:GO:0010599 GO:GO:0010267 GO:GO:0040034
GO:GO:0010050 EMBL:EF486281 EMBL:AB353924 EMBL:AC135597
RefSeq:NP_001050473.2 UniGene:Os.75048
EnsemblPlants:LOC_Os03g33650.1 GeneID:4333232
KEGG:dosa:Os03t0449200-00 KEGG:osa:4333232 Gramene:Q75HC2
Uniprot:Q75HC2
Length = 1048
Score = 190 (71.9 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 55/169 (32%), Positives = 81/169 (47%)
Query: 399 LLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAPT---KVNEQYLMNVLLKINAKLGGLN 455
L+C++ R Y KR + G+ QC + K+ Q+L N+ LKINAKLGG N
Sbjct: 710 LICVMERRHQG--YADLKRIAETSIGVVTQCCLYSNLSKLTSQFLTNLALKINAKLGGCN 767
Query: 456 SLLAIEQSKNLPLV--SKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASV 513
L +P + S+ P + G DV+H P NWP ++Y + +
Sbjct: 768 IALYSSFPCQIPRIFLSEEPVMFMGADVTHPHPLDDSSPSVVAVVASMNWPSANKYISRM 827
Query: 514 RSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
RSQ+ + E+I+ L D + ELL +F K G+ PS+II FR
Sbjct: 828 RSQTHRKEIIEQL--------DV-MAGELLEEFLKEVGKL-PSRIIFFR 866
Score = 126 (49.4 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 34/137 (24%), Positives = 66/137 (48%)
Query: 184 NIGVKDRNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSL 243
N+ +DR+ D+ V DYF H ++ F + PC+ +G+ KP Y+P+ELC +
Sbjct: 478 NLKFRDRSGK----DLMVVDYFKEHYNHDIQFR-NLPCLQIGRS-KPCYVPMELCVVCEG 531
Query: 244 QRYTKALTVFQRSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISI 303
Q++ L+ Q S +++ ++P E+ II V + S+ + +
Sbjct: 532 QKFLGKLSDEQTSKILKMGCERPSERKGIIK-------GVVKGAFHARSDTYADQFSLQV 584
Query: 304 NSRFAQVEGRILSAPRI 320
+ ++ GR+L P++
Sbjct: 585 SKHMTKLSGRVLLPPKL 601
Score = 71 (30.1 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 144 LVRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNI 185
LV +S + D+GGG +G GF + T+ GL+LN+
Sbjct: 362 LVGRSLYARSMGEARDIGGGAVGLRGFFQRLRPTKQGLALNV 403
>TAIR|locus:2197545 [details] [associations]
symbol:AGO2 "argonaute 2" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0051607 "defense response to virus"
evidence=IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0042742 GO:GO:0006351
GO:GO:0051607 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 EMBL:AC007654 EMBL:BT005914 EMBL:AK118463
IPI:IPI00546861 PIR:H86438 RefSeq:NP_174413.2 UniGene:At.40380
PDB:4G0M PDBsum:4G0M ProteinModelPortal:Q9SHF3 SMR:Q9SHF3
IntAct:Q9SHF3 PaxDb:Q9SHF3 PRIDE:Q9SHF3 EnsemblPlants:AT1G31280.1
GeneID:840016 KEGG:ath:AT1G31280 TAIR:At1g31280 eggNOG:NOG275416
InParanoid:Q9SHF3 OMA:DIPCLDL PhylomeDB:Q9SHF3
ProtClustDB:CLSN2682370 Genevestigator:Q9SHF3 GO:GO:0035197
Uniprot:Q9SHF3
Length = 1014
Score = 159 (61.0 bits), Expect = 4.6e-18, Sum P(4) = 4.6e-18
Identities = 54/172 (31%), Positives = 82/172 (47%)
Query: 395 RPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCL--AP-TKVNEQYLMNVLLKINAKL 451
RP +LC + RKD D Y + K ++ G+ QC P TK +QY N+ LK+NAK+
Sbjct: 663 RPTLVLCAM-SRKD-DGYKTLKWIAETKLGLVTQCFLTGPATKGGDQYRANLALKMNAKV 720
Query: 452 GGLNSLLAIEQSKNLPLVSKVPTIIF-GMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYR 510
GG N +E K ++F G DV+H + NWP +RY
Sbjct: 721 GGSN----VELMDTFSFFKKEDEVMFIGADVNHPAARDKMSPSIVAVVGTLNWPEANRYA 776
Query: 511 ASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
A V +Q + E I DA + EL+ +++G+ +P++I+IFR
Sbjct: 777 ARVIAQPHRKEEIQGF-------GDACL--ELVKAHVQATGK-RPNKIVIFR 818
Score = 120 (47.3 bits), Expect = 4.6e-18, Sum P(4) = 4.6e-18
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 218 DFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSAL-VEK-SQQKPQEKMKIITD 275
D PC+D+GK + ++P+E C L+ Q Y K + + SAL ++K S PQ++ + I
Sbjct: 458 DIPCLDLGKNGRQNFVPMEFCDLVEGQIYPKD-NLDKDSALWLKKLSLVNPQQRQRNI-- 514
Query: 276 DSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILSAPRI 320
D M + N ++ + G+ +++ VEGR+L AP +
Sbjct: 515 DKM-----IKARNGPSGGEIIGNFGLKVDTNMTPVEGRVLKAPSL 554
Score = 57 (25.1 bits), Expect = 4.6e-18, Sum P(4) = 4.6e-18
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMI 126
G+ S N R+ + +D+++++H +K MI
Sbjct: 289 GRSSFNPRDVLQGMDVVMKEHPSKCMI 315
Score = 56 (24.8 bits), Expect = 4.6e-18, Sum P(4) = 4.6e-18
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 142 CFL-VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSL 183
C + V +SFF E D GV+ G+ + + T GLSL
Sbjct: 313 CMITVGKSFFTRETEPDEDFRFGVIAAKGYRHTLKPTAQGLSL 355
Score = 40 (19.1 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 229 KPTYIPIELCSLLSLQRYTKALTVFQ 254
KPT + LC S+ + KA++V +
Sbjct: 347 KPTAQGLSLCLDYSVLAFRKAMSVIE 372
>UNIPROTKB|F1LZ24 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00388676
Ensembl:ENSRNOT00000037178 ArrayExpress:F1LZ24 Uniprot:F1LZ24
Length = 746
Score = 168 (64.2 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 50/130 (38%), Positives = 68/130 (52%)
Query: 434 KVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXX 493
K + Q L N+ LKIN KLGG+N++L Q P V + P I G DV+H G
Sbjct: 441 KTSPQTLSNLCLKINVKLGGINNILVPHQR---PSVFQQPVIFLGADVTHPPAGDGKKPS 497
Query: 494 XXXXXXXRN-WPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQ 552
+ P SRY A+VR Q + E+I L A +VRELL+ FYKS+ +
Sbjct: 498 IAAVVGSMDAHP--SRYCATVRVQRPRQEIIQDL---------ASMVRELLIQFYKST-R 545
Query: 553 TKPSQIIIFR 562
KP++II +R
Sbjct: 546 FKPTRIIFYR 555
Score = 115 (45.5 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 197 VDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRS 256
V+ TV YF + L + PC+ VG+ +K TY+P+E+C++++ QR K LT Q S
Sbjct: 295 VERTVAQYFREKYTLQLKYP-HLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS 353
Query: 257 ALVEKSQQKPQEKMKIIT 274
+++ + + ++ + I+
Sbjct: 354 TMIKATARSAPDRQEEIS 371
Score = 58 (25.5 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 145 VRQSFFQNEPRSF-FDLGGGVLGCWGFHSSFQATQGGLSLNIGV 187
V +SFF + P + LGGG +GFH S + + LNI V
Sbjct: 168 VGRSFF-SAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 210
Score = 47 (21.6 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMIDHRSISIFLATS 138
GQE +++ V +I+ Q K + D+++ ++ AT+
Sbjct: 322 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATA 360
>POMBASE|SPCC736.11 [details] [associations]
symbol:ago1 "argonaute" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IGI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0005724 "nuclear telomeric heterochromatin"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006808
"regulation of nitrogen utilization" evidence=IMP] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0030958 "RITS
complex" evidence=IDA] [GO:0031048 "chromatin silencing by small
RNA" evidence=IMP] [GO:0031934 "mating-type region heterochromatin"
evidence=IDA] [GO:0033167 "ARC complex" evidence=IDA] [GO:0033168
"conversion of ds siRNA to ss siRNA involved in RNA interference"
evidence=IMP] [GO:0051570 "regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0090052 "regulation of chromatin silencing at
centromere" evidence=IMP] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
PomBase:SPCC736.11 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 SUPFAM:SSF53098 GO:GO:0031048 eggNOG:NOG279895
HOGENOM:HOG000116043 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 PIR:T41568 RefSeq:NP_587782.1
ProteinModelPortal:O74957 DIP:DIP-29298N IntAct:O74957
STRING:O74957 EnsemblFungi:SPCC736.11.1 GeneID:2539403
KEGG:spo:SPCC736.11 KO:K11596 OMA:YFREKYS OrthoDB:EOG4B8NN4
NextBio:20800567 GO:GO:0033167 GO:GO:0005721 GO:GO:0031934
GO:GO:0005724 GO:GO:0030958 GO:GO:0033168 GO:GO:0090052
GO:GO:0051570 GO:GO:0006808 Uniprot:O74957
Length = 834
Score = 147 (56.8 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 75/249 (30%), Positives = 108/249 (43%)
Query: 323 PAAKIDHWAVANFSGGCDIRSL-CRDLIRFGEMK-RISTSPPLNVFEENPQFRRAPAPVR 380
P A I WAV F+ R L R + F + + TS +N + P A
Sbjct: 422 PRAPIRSWAVMCFTS---TRRLPMRGIENFLQTYVQTLTSLGINFVMKKPPVLYADIRGS 478
Query: 381 VDRMFEQMKQKFEK----RPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAPTKVN 436
V+ + + +K E+ P +L +L D+ + YGS KR + G+ +QC +
Sbjct: 479 VEELCITLYKKAEQVGNAPPDYLFFIL-DKNSPEPYGSIKRVCNTMLGVPSQCAISKHIL 537
Query: 437 E---QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXX 493
+ QY N+ +KIN K+GG+N L K+ PL VPT+I G DV H PG
Sbjct: 538 QSKPQYCANLGMKINVKVGGINCSLI---PKSNPL-GNVPTLILGGDVYH--PGVGATGV 591
Query: 494 XXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQT 553
+Y A RSQ E+I+ + KD IV LL F + Q
Sbjct: 592 SIASIVASVDLNGCKYTAVSRSQPRHQEVIEGM------KD---IVVYLLQGFRAMTKQ- 641
Query: 554 KPSQIIIFR 562
+P +II FR
Sbjct: 642 QPQRIIYFR 650
Score = 126 (49.4 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 199 VTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSAL 258
++V +YF+ + + L + + PCI V + +PIE C ++ QRYT L Q + +
Sbjct: 287 ISVAEYFLENHNVRLQYP-NLPCILV---KNGAMLPIEFCFVVKGQRYTAKLNSDQTANM 342
Query: 259 VEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILSAP 318
+ + Q+P E+++ I DD + H D++P L G+ I + +V R+L P
Sbjct: 343 IRFAVQRPFERVQQI-DDFV-HQMDW------DTDPYLTQYGMKIQKKMLEVPARVLETP 394
Query: 319 RI 320
I
Sbjct: 395 SI 396
Score = 71 (30.1 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 148 SFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSLNIGVKD----RNDDV 194
SFF E + LGGGV GF+ S + QG +S+N+ + RND +
Sbjct: 163 SFFTGE--NGVSLGGGVEAWKGFYQSIRPNQGFMSVNVDISSSAFWRNDSL 211
Score = 39 (18.8 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 168 WGFHSSFQATQGGLSLNIGVK 188
+GF SF + G+SL GV+
Sbjct: 158 FGFMHSFFTGENGVSLGGGVE 178
>WB|WBGene00011910 [details] [associations]
symbol:T22B3.2b species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GeneTree:ENSGT00640000091312
GO:GO:0043186 EMBL:Z68300 EMBL:Z68750 UniGene:Cel.5687
GeneID:178106 KEGG:cel:CELE_T22B3.2 CTD:178106 NextBio:899736
PIR:T23164 PIR:T23165 RefSeq:NP_502217.1 ProteinModelPortal:G5ED77
SMR:G5ED77 PRIDE:G5ED77 EnsemblMetazoa:T22B3.2b WormBase:T22B3.2b
OMA:DATQREE Uniprot:G5ED77
Length = 1035
Score = 174 (66.3 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 50/170 (29%), Positives = 88/170 (51%)
Query: 397 CFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAPTKVNEQY---LMNVLLKINAKLGG 453
C + ++ K+SD+Y + K ++ GI +QC+ V+ N++LK+N K+GG
Sbjct: 653 CDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVSRPTPATCANIILKLNMKMGG 712
Query: 454 LNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSR-YRAS 512
+NS + +Q N LV + PT++ G+DV+H + N +L + Y A+
Sbjct: 713 INSRIVADQITNKYLVDQ-PTMVVGIDVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGAN 771
Query: 513 VRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
V+ Q E + L DA +RE ++ FY+ + Q KP++II++R
Sbjct: 772 VKVQKKCRESVVYLL-------DA--IRERIITFYRHTKQ-KPARIIVYR 811
Score = 124 (48.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 33/135 (24%), Positives = 68/135 (50%)
Query: 186 GVKDRNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQR 245
G+ + V C +V DYF + + L + PC+ VG P + ++P+E C + S Q+
Sbjct: 430 GIDEEGRQVVC---SVADYF-SEKYGPLKYP-KLPCLHVGPPTRNIFLPMEHCLIDSPQK 484
Query: 246 YTKALTVFQRSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINS 305
Y K +T Q SA+++ + ++ +D ++ Q+ ++P L+ G++++S
Sbjct: 485 YNKKMTEKQTSAIIKAAAVDATQR-----EDRIK---QLAAQASFGTDPFLKEFGVAVSS 536
Query: 306 RFAQVEGRILSAPRI 320
+ + R++ P I
Sbjct: 537 QMIETSARVIQPPPI 551
>WB|WBGene00006449 [details] [associations]
symbol:tag-76 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00950 GO:GO:0003676
GO:GO:0019915 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091312 EMBL:Z29121 EMBL:Z30215 PIR:D88568
PIR:S41013 RefSeq:NP_499191.1 RefSeq:NP_499192.1 RefSeq:NP_499193.1
ProteinModelPortal:P34681 SMR:P34681 STRING:P34681 PRIDE:P34681
EnsemblMetazoa:ZK757.3a.1 EnsemblMetazoa:ZK757.3a.2 GeneID:13190961
GeneID:176400 KEGG:cel:CELE_ZK757.3 KEGG:cel:CELE_ZK757.3a
UCSC:ZK757.3b CTD:176400 WormBase:ZK757.3a WormBase:ZK757.3b
WormBase:ZK757.3c InParanoid:P34681 OMA:ARIFCKY NextBio:892412
Uniprot:P34681
Length = 1040
Score = 169 (64.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 49/170 (28%), Positives = 88/170 (51%)
Query: 397 CFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCLAPTKVNEQY---LMNVLLKINAKLGG 453
C + ++ K+SD+Y + K ++ GI +QC+ V+ N++LK+N K+GG
Sbjct: 658 CDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVSRPTPATCANIVLKLNMKMGG 717
Query: 454 LNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSR-YRAS 512
+NS + ++ N LV + PT++ G+DV+H + N +L + Y A+
Sbjct: 718 INSRIVADKITNKYLVDQ-PTMVVGIDVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGAN 776
Query: 513 VRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
V+ Q E + L DA +RE ++ FY+ + Q KP++II++R
Sbjct: 777 VKVQKKCRESVVYLL-------DA--IRERIITFYRHTKQ-KPARIIVYR 816
Score = 122 (48.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 33/135 (24%), Positives = 68/135 (50%)
Query: 186 GVKDRNDDVKCVDVTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQR 245
G+ + V C +V DYF + + L + PC+ VG P + ++P+E C + S Q+
Sbjct: 435 GIDEEGRQVVC---SVADYF-SEKYGPLKYP-KLPCLHVGPPTRNIFLPMEHCLIDSPQK 489
Query: 246 YTKALTVFQRSALVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINS 305
Y K ++ Q SA+++ + ++ +D ++ Q+ ++P L+ G++++S
Sbjct: 490 YNKKMSEKQTSAIIKAAAVDATQR-----EDRIK---QLAAQASFGTDPFLKEFGVAVSS 541
Query: 306 RFAQVEGRILSAPRI 320
+ Q R++ P I
Sbjct: 542 QMIQTTARVIQPPPI 556
>TAIR|locus:2197550 [details] [associations]
symbol:AGO3 "ARGONAUTE 3" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593 GO:GO:0031047
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC007654
eggNOG:NOG275416 ProtClustDB:CLSN2682370 IPI:IPI00516671
RefSeq:NP_174414.1 UniGene:At.51183 ProteinModelPortal:Q9SHF2
SMR:Q9SHF2 PaxDb:Q9SHF2 PRIDE:Q9SHF2 EnsemblPlants:AT1G31290.1
GeneID:840017 KEGG:ath:AT1G31290 TAIR:At1g31290 InParanoid:Q9SHF2
OMA:ELAMVKE PhylomeDB:Q9SHF2 Genevestigator:Q9SHF2 Uniprot:Q9SHF2
Length = 1194
Score = 153 (58.9 bits), Expect = 4.7e-15, Sum P(4) = 4.7e-15
Identities = 50/175 (28%), Positives = 81/175 (46%)
Query: 396 PCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQC---LAPTK---VNEQYLMNVLLKINA 449
P +LC + + D W +T + G+ QC ++ K V++QYL N+ LKINA
Sbjct: 839 PTLVLCAMTGKHDGYKTLKWIAET--KLGLVTQCFLTISAIKGETVSDQYLANLALKINA 896
Query: 450 KLGGLNSLLAIEQSKNL-PLVSKVPTIIF-GMDVSHGSPGHXXXXXXXXXXXXRNWPILS 507
K+GG N +E N+ K ++F G DV+H + NWP +
Sbjct: 897 KVGGTN----VELVDNIFSFFKKEDKVMFIGADVNHPAAHDNMSPSIVAVVGTLNWPEAN 952
Query: 508 RYRASVRSQSTKLEMIDSLFKPLPNKDDAGIVRELLVDFYKSSGQTKPSQIIIFR 562
RY A V++QS + E I G L++ + + + +P++I+IFR
Sbjct: 953 RYAARVKAQSHRKEEIQGF----------GETCWELIEAHSQAPEKRPNKIVIFR 997
Score = 111 (44.1 bits), Expect = 4.7e-15, Sum P(4) = 4.7e-15
Identities = 30/124 (24%), Positives = 63/124 (50%)
Query: 199 VTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSA- 257
+++ +YF ++ D PC+++GK + ++P+E C+L+ Q + K +++ SA
Sbjct: 614 ISIVEYFKEKYGRDIDHK-DIPCLNLGKKGRENFVPMEFCNLVEGQIFPKE-KLYRDSAA 671
Query: 258 -LVEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILS 316
L E S PQ++++ I + S+ ++ + G+ ++ VEGR+L
Sbjct: 672 WLKELSLVTPQQRLENINK-------MIKSSDGPRGGDIIGNFGLRVDPNMTTVEGRVLE 724
Query: 317 APRI 320
AP +
Sbjct: 725 APTL 728
Score = 54 (24.1 bits), Expect = 4.7e-15, Sum P(4) = 4.7e-15
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCWGFHSSFQATQGGLSL 183
V + FF R D G GV GFH + + T GLSL
Sbjct: 490 VGKRFFST--RLEIDFGYGVGAAKGFHHTLKPTVQGLSL 526
Score = 48 (22.0 bits), Expect = 4.7e-15, Sum P(4) = 4.7e-15
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 100 GQESQNSREAFRVLDIILRQHAAKHMI 126
G+ + R+ + +D+++++H +K MI
Sbjct: 462 GRSTFIPRDVLQGMDVVMKEHPSKRMI 488
Score = 44 (20.5 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 229 KPTYIPIELCSLLSLQRYTKALTVFQ 254
KPT + LC SL + KA++V +
Sbjct: 518 KPTVQGLSLCLNSSLLAFRKAISVIE 543
Score = 40 (19.1 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 145 VRQSFFQNEPRSFFDLGGGVLGCW 168
V QS Q + F GG LG W
Sbjct: 265 VSQSSSQGQVSQSFATGGVGLGAW 288
>ASPGD|ASPL0000044981 [details] [associations]
symbol:rsdA species:162425 "Emericella nidulans"
[GO:0031047 "gene silencing by RNA" evidence=IMP] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 EMBL:BN001307
GO:GO:0003676 SUPFAM:SSF53098 eggNOG:NOG279895 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AACD01000024 RefSeq:XP_659123.1
ProteinModelPortal:Q5BD61 PRIDE:Q5BD61
EnsemblFungi:CADANIAT00008147 GeneID:2874578 KEGG:ani:AN1519.2
HOGENOM:HOG000158169 OMA:TRARCYL OrthoDB:EOG4CJZRC Uniprot:Q5BD61
Length = 1019
Score = 174 (66.3 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 74/253 (29%), Positives = 111/253 (43%)
Query: 281 YAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILSAPRIFVPAAKIDHWAVANFSGGCD 340
Y + +S + PM S + + RF+ + S I + A H F D
Sbjct: 554 YYKDEKSKDKEIAPMSGSWNMK-SIRFS-TSSNLQSWACILITAGPKQH-----FQSPDD 606
Query: 341 IRSLCRDLIRFGEMKR---ISTSPPLNVFEENPQFRRAPAPVRVDRMFEQMKQKFEKRPC 397
+ C L RF + R ++ +PP VF+ Q + A +D E K + RP
Sbjct: 607 LED-C--LYRFTKKLREVGVNANPP--VFKVRVQVTKENAETVIDA--EIRKILHQHRPK 659
Query: 398 FLLCLLPDRKDSDLYGSWKRKTLSEFGIFN-QCLAPT--KVNEQYLMNVLLKINAKLGGL 454
+L +LP D+ LY KR G+ N LA K NEQY NV LK N KLGG+
Sbjct: 660 LILTILPFN-DTALYNCIKRACDVRHGVRNINVLAEQFCKRNEQYFANVGLKFNLKLGGV 718
Query: 455 NSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVR 514
N ++ Q L ++ + T++ G+DV+H SPG L ++ A +R
Sbjct: 719 NQVVRPSQ---LGIIGEGKTMLIGIDVTHPSPGSAKGAPSVAAMVASVDSSLGQWPAEIR 775
Query: 515 SQS-TKLEMIDSL 526
Q + EM+D+L
Sbjct: 776 IQKEARKEMVDAL 788
Score = 141 (54.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 39/147 (26%), Positives = 72/147 (48%)
Query: 199 VTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSAL 258
+TV ++F + RI + D P ++VG KP+Y+P+E+C +LS Q L+ Q +
Sbjct: 439 ITVAEFFKEYYRIQV--DPDMPVVNVGSIAKPSYLPVEVCDVLSGQPAKTKLSSNQTRQM 496
Query: 259 VEKSQQKP-QEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILSA 317
+ + + P Q I+T + Q++ ++ + L GI N V GR+L+
Sbjct: 497 LNFAVRSPAQNAHSIVTKGT-----QIL-GLRDPTAATLVDFGIQTNPNLITVPGRVLAP 550
Query: 318 PRIFVPAAKIDHWAVANFSGGCDIRSL 344
P ++ K +A SG +++S+
Sbjct: 551 PTVYYKDEKSKDKEIAPMSGSWNMKSI 577
Score = 53 (23.7 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 158 FDLGGGVLGCWGFHSSFQATQGGLSLNIGVK 188
FDLG G+ G+ S +A L +NI VK
Sbjct: 294 FDLGAGLEALRGYFVSVRAATARLLVNIQVK 324
Score = 40 (19.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 4 SVFIG-PEESKRTSKLGPTGEKSLFTIS 30
S F+ PE+ K + K GP + T++
Sbjct: 415 SFFLDDPEQGKGSKKAGPKPSGTYITVA 442
>FB|FBgn0087035 [details] [associations]
symbol:AGO2 "Argonaute 2" species:7227 "Drosophila
melanogaster" [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0030422 "production of siRNA involved in RNA interference"
evidence=IMP;IDA] [GO:0016442 "RNA-induced silencing complex"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=TAS] [GO:0016246 "RNA interference"
evidence=IDA;NAS;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0035197 "siRNA binding" evidence=IDA]
[GO:0035087 "siRNA loading onto RISC involved in RNA interference"
evidence=IDA;IMP] [GO:0035190 "syncytial nuclear migration"
evidence=IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0007279 "pole cell formation" evidence=IMP] [GO:0004521
"endoribonuclease activity" evidence=IDA] [GO:0035195 "gene
silencing by miRNA" evidence=IMP] [GO:0051607 "defense response to
virus" evidence=IMP] [GO:0033227 "dsRNA transport" evidence=IMP]
[GO:0007367 "segment polarity determination" evidence=IGI]
[GO:0070578 "RISC-loading complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0045071 "negative regulation of viral
genome replication" evidence=IMP] [GO:0070868 "heterochromatin
organization involved in chromatin silencing" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0005737 GO:GO:0019048 EMBL:AE014296
GO:GO:0051607 GO:GO:0045071 SUPFAM:SSF53098 eggNOG:NOG279895
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0016442 EMBL:BT003546 EMBL:BT099682
EMBL:DQ228766 EMBL:DQ228767 EMBL:DQ228768 EMBL:DQ228769
EMBL:DQ228770 EMBL:DQ228771 EMBL:DQ228772 EMBL:DQ228773
EMBL:AY094751 RefSeq:NP_648775.1 RefSeq:NP_730054.1 UniGene:Dm.9677
PDB:1R6Z PDB:1T2R PDB:1T2S PDB:1VYN PDB:3MJ0 PDBsum:1R6Z
PDBsum:1T2R PDBsum:1T2S PDBsum:1VYN PDBsum:3MJ0
ProteinModelPortal:Q9VUQ5 SMR:Q9VUQ5 DIP:DIP-41570N IntAct:Q9VUQ5
MINT:MINT-248245 STRING:Q9VUQ5 PaxDb:Q9VUQ5
EnsemblMetazoa:FBtr0075559 GeneID:39683 KEGG:dme:Dmel_CG7439
CTD:39683 FlyBase:FBgn0087035 GeneTree:ENSGT00640000091312
InParanoid:Q9VUQ5 OMA:QGRQGQE OrthoDB:EOG47D7X0
EvolutionaryTrace:Q9VUQ5 GenomeRNAi:39683 NextBio:814859
Bgee:Q9VUQ5 GermOnline:CG7439 GO:GO:0070578 GO:GO:0004521
GO:GO:0033227 GO:GO:0070868 GO:GO:0007279 GO:GO:0030422
GO:GO:0035071 GO:GO:0007367 GO:GO:0035087 GO:GO:0035190
GO:GO:0030423 Uniprot:Q9VUQ5
Length = 1214
Score = 166 (63.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 91/353 (25%), Positives = 143/353 (40%)
Query: 199 VTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSAL 258
VT+ YF + R L F C++VG K +PIELCS+ Q + Q + +
Sbjct: 676 VTIASYF-HSRNYPLKFP-QLHCLNVGSSIKSILLPIELCSIEEGQALNRKDGATQVANM 733
Query: 259 VEKSQQKPQ-EKMKIITD-DSMEHYAQVMRSN-----KND----SEPMLRSCGISINS-R 306
++ + K KI+ +H S ND S +L + +S R
Sbjct: 734 IKYAATSTNVRKRKIMNLLQYFQHNLDPTISRFGIRIANDFIVVSTRVLSPPQVEYHSKR 793
Query: 307 FAQVEGRI--LSAPRIFVPAAKIDHWAVANFSGGCDIRSLCR----DLIRFGEMKRISTS 360
F V+ + + P K AV CD RS + L FG + IS
Sbjct: 794 FTMVKNGSWRMDGMKFLEPKPKAHKCAVLY----CDPRSGRKMNYTQLNDFGNLI-ISQG 848
Query: 361 PPLNV-FEENPQFRRAPAPVR-VDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRK 418
+N+ + + +R R +D +F +K+ + ++P + S Y + K+K
Sbjct: 849 KAVNISLDSDVTYRPFTDDERSLDTIFADLKRSQHD---LAIVIIPQFRIS--YDTIKQK 903
Query: 419 TLSEFGIFNQCL----APTKVNEQYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPT 474
+ GI QC+ K N Q + N+LLKIN+KL G+N I+ LP++ T
Sbjct: 904 AELQHGILTQCIKQFTVERKCNNQTIGNILLKINSKLNGINH--KIKDDPRLPMMKN--T 959
Query: 475 IIFGMDVSHGSPGHXXXXXXXXXXXXRNWPILSRYRASVRSQSTKLEMIDSLF 527
+ G DV+H SP + P + Y R Q LE I+ +F
Sbjct: 960 MYIGADVTHPSPDQREIPSVVGVAASHD-PYGASYNMQYRLQRGALEEIEDMF 1011
>UNIPROTKB|G4N9J3 [details] [associations]
symbol:MGG_14873 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
EMBL:CM001234 RefSeq:XP_003716704.1 ProteinModelPortal:G4N9J3
EnsemblFungi:MGG_14873T0 GeneID:12984579 KEGG:mgr:MGG_14873
Uniprot:G4N9J3
Length = 1030
Score = 130 (50.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 39/146 (26%), Positives = 67/146 (45%)
Query: 381 VDRMFEQMKQKFEKRPCFLLCLLPDRKDSDLYGSWKRKTLSEFGIFNQCL--APTKVNE- 437
V++ ++ + + P + +LP+ K S Y K+ + + QC+ A + N+
Sbjct: 655 VEKAYQAVGNANKAHPNLIFFILPN-KSSINYERIKKSADCRYALVTQCMQAAHVRKNQA 713
Query: 438 QYLMNVLLKINAKLGGLNSLLAIEQSKNLPLVSKVPTIIFGMDVSHGSPGHXXXXXXXXX 497
QY NV +K+NAKLGG Q+ + K PT++ G DVSH +PG
Sbjct: 714 QYCSNVAMKVNAKLGG--------QTCKVATAFKKPTMMIGCDVSHAAPGAQQASMAAIT 765
Query: 498 XXXRNWPILSRYRASVRSQSTKLEMI 523
+RY A+V + + E++
Sbjct: 766 VSMDK--DCARYAAAVETNGYRCEIL 789
Score = 83 (34.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 31/144 (21%), Positives = 64/144 (44%)
Query: 199 VTVFDYFVNHRRINLCFSGDFPCIDVGKPRKPTYIPIELCSLLSLQRYTKALTVFQRSAL 258
++V+D+F + L P I+ + + P+E+C++ QRY L Q + +
Sbjct: 459 ISVYDHFQKQYNVRLNH-WKLPLIET---TRDGFFPMEVCAVELYQRYNYKLDPDQTAKM 514
Query: 259 VEKSQQKPQEKMKIITDDSMEHYAQVMRSNKNDSEPMLRSCGISINSRFAQVEGRILSAP 318
++ + +P ++ D M + + +R N+ +P L+ I ++ R++ P
Sbjct: 515 IKFAVTRPAQR----ASDIMANVNE-LRWNE---DPYLKHFKIQVSQTMETAPARVIPNP 566
Query: 319 RIFVPAAKIDHWAVANFSGGCDIR 342
I AK++ SG D+R
Sbjct: 567 EIQYKGAKVN----PGVSGRWDLR 586
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 568 543 0.00095 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 615 (65 KB)
Total size of DFA: 300 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.33u 0.12s 43.45t Elapsed: 00:00:02
Total cpu time: 43.35u 0.12s 43.47t Elapsed: 00:00:02
Start: Sat May 11 13:33:53 2013 End: Sat May 11 13:33:55 2013