Your job contains 1 sequence.
>048682
RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL
ELLLQNLQQLNLPNN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048682
(75 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2140050 - symbol:AT4G39970 species:3702 "Arabi... 256 5.5e-22 1
TAIR|locus:2101165 - symbol:AT3G48420 species:3702 "Arabi... 133 2.5e-08 1
TIGR_CMR|DET_0395 - symbol:DET_0395 "glycoprotease family... 102 0.00011 1
TAIR|locus:2010728 - symbol:AT1G56500 species:3702 "Arabi... 101 0.00040 1
>TAIR|locus:2140050 [details] [associations]
symbol:AT4G39970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA;ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR006402 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0009941 GO:GO:0016787 Pfam:PF13419
TIGRFAMs:TIGR01509 eggNOG:COG0637 HOGENOM:HOG000248341
EMBL:AK175831 EMBL:AK175865 EMBL:AK176082 IPI:IPI00527587
RefSeq:NP_568077.1 UniGene:At.43709 UniGene:At.68472
ProteinModelPortal:Q680K2 SMR:Q680K2 STRING:Q680K2 PaxDb:Q680K2
PRIDE:Q680K2 EnsemblPlants:AT4G39970.1 GeneID:830158
KEGG:ath:AT4G39970 TAIR:At4g39970 InParanoid:Q680K2 OMA:ADTESAH
PhylomeDB:Q680K2 ProtClustDB:PLN02779 Genevestigator:Q680K2
Uniprot:Q680K2
Length = 316
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 48/59 (81%), Positives = 57/59 (96%)
Query: 1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
+LG+S KDCLVVEDSVIGLQAAT+AGM+CVITYTSST++Q+F DAIA+YPDLSNV+LKD
Sbjct: 246 KLGVSVKDCLVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDAIAVYPDLSNVKLKD 304
>TAIR|locus:2101165 [details] [associations]
symbol:AT3G48420 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA;ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] InterPro:IPR006402 GO:GO:0009570 EMBL:CP002686
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0009941 GO:GO:0016787 Pfam:PF13419 TIGRFAMs:TIGR01509
ProtClustDB:PLN02779 EMBL:AF370250 EMBL:AY063066 EMBL:AK118118
EMBL:AK175866 EMBL:AK176795 IPI:IPI00532424 RefSeq:NP_566903.1
UniGene:At.3168 ProteinModelPortal:Q94K71 SMR:Q94K71 STRING:Q94K71
PRIDE:Q94K71 ProMEX:Q94K71 EnsemblPlants:AT3G48420.1 GeneID:824000
KEGG:ath:AT3G48420 TAIR:At3g48420 InParanoid:Q94K71 OMA:HREAFNE
PhylomeDB:Q94K71 ArrayExpress:Q94K71 Genevestigator:Q94K71
Uniprot:Q94K71
Length = 319
Score = 133 (51.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 49
LG+ C+VVEDS IGL AA AGM C++T + TA++DF++A A++
Sbjct: 246 LGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGYTADEDFENADAVF 293
>TIGR_CMR|DET_0395 [details] [associations]
symbol:DET_0395 "glycoprotease family protein/hydrolase,
beta-phosphoglucomutase family" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR005833 InterPro:IPR006402
InterPro:IPR006439 InterPro:IPR022496 PRINTS:PR00413
InterPro:IPR000905 Pfam:PF00814 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 GO:GO:0006508
Gene3D:1.10.150.240 InterPro:IPR023198 Pfam:PF13419
TIGRFAMs:TIGR01509 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0008233 GO:GO:0008967 eggNOG:COG0637 TIGRFAMs:TIGR01549
InterPro:IPR010976 TIGRFAMs:TIGR02009 TIGRFAMs:TIGR03725
RefSeq:YP_181140.1 ProteinModelPortal:Q3Z9F9 STRING:Q3Z9F9
GeneID:3230269 KEGG:det:DET0395 PATRIC:21607857
HOGENOM:HOG000275435 OMA:FREYAGQ ProtClustDB:CLSK837500
BioCyc:DETH243164:GJNF-395-MONOMER Uniprot:Q3Z9F9
Length = 456
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
RL S ++CLV+ED+ G++AA +AGM C I T+S Q +A I L + ++D
Sbjct: 388 RLCASPEECLVIEDAPAGVEAAKKAGMKC-IAVTNSQQPQALSEADMIVDTLGKISVED 445
>TAIR|locus:2010728 [details] [associations]
symbol:AT1G56500 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA;ISS] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0009773 "photosynthetic electron transport in
photosystem I" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0034660
"ncRNA metabolic process" evidence=RCA] InterPro:IPR001258
InterPro:IPR005833 InterPro:IPR006402 Pfam:PF01436 PRINTS:PR00413
InterPro:IPR000033 EMBL:CP002684 GO:GO:0009570 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 Gene3D:2.120.10.30
InterPro:IPR011042 SMART:SM00135 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0016787 Pfam:PF13419
TIGRFAMs:TIGR01509 PROSITE:PS51352 GO:GO:0009534 EMBL:AY065399
IPI:IPI00547570 RefSeq:NP_564718.2 UniGene:At.28196
ProteinModelPortal:Q8VZ10 SMR:Q8VZ10 STRING:Q8VZ10 PRIDE:Q8VZ10
EnsemblPlants:AT1G56500.1 GeneID:842103 KEGG:ath:AT1G56500
TAIR:At1g56500 HOGENOM:HOG000030168 InParanoid:Q8VZ10 OMA:VCLYQSV
PhylomeDB:Q8VZ10 ProtClustDB:PLN02919 ArrayExpress:Q8VZ10
Genevestigator:Q8VZ10 Uniprot:Q8VZ10
Length = 1055
Score = 101 (40.6 bits), Expect = 0.00040, P = 0.00040
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDA--IAIYPDLSNVRLKD 59
LG+ +C+V+ED++ G+QAA A M C+ T+ +E KDA I D+ N+ + D
Sbjct: 230 LGVPTSECVVIEDALAGVQAAQAANMRCIAVKTT-LSEAILKDAGPSMIRDDIGNISIND 288
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 75 59 0.00091 102 3 11 22 0.48 27
29 0.49 27
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 412 (44 KB)
Total size of DFA: 68 KB (2060 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.36u 0.15s 7.51t Elapsed: 00:00:00
Total cpu time: 7.36u 0.15s 7.51t Elapsed: 00:00:00
Start: Sat May 11 14:08:45 2013 End: Sat May 11 14:08:45 2013