Your job contains 1 sequence.
>048683
MSEAKAVLSIAASLAASAMLIGSIANDFLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFL
GLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWK
LICTQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKE
DCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR
VWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSG
LLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQMLIM
EMNGTPAEAAGELANSAEAQVSLQGLIKFLHVKLQATN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048683
(398 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 609 5.0e-85 2
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 611 8.3e-83 2
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 396 1.5e-74 4
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 443 1.9e-68 3
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 453 5.0e-66 3
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 483 2.3e-64 2
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 483 3.7e-64 2
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 382 2.0e-59 2
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 444 9.9e-58 2
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 410 6.9e-55 2
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 396 9.9e-54 2
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 351 1.6e-51 2
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 349 1.4e-50 2
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 379 1.8e-50 2
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 367 2.3e-50 2
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 373 3.7e-50 2
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 357 2.6e-49 2
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 352 7.9e-49 2
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 352 1.1e-48 2
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 332 2.0e-47 2
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 279 5.0e-37 2
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 332 6.4e-37 2
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 314 3.9e-28 1
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 248 4.5e-21 1
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 161 3.0e-20 2
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 159 4.3e-19 2
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 154 1.7e-18 2
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 159 2.3e-18 2
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 162 3.0e-18 2
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 151 3.7e-18 2
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 155 4.2e-18 2
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 152 1.5e-17 2
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 151 1.6e-17 2
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 145 2.6e-17 2
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 149 7.8e-17 2
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 149 1.1e-16 2
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 142 4.8e-16 2
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 142 7.3e-16 2
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 142 9.2e-16 2
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 140 7.9e-15 2
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 138 1.5e-14 2
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 130 2.9e-13 2
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 164 1.4e-11 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 171 6.0e-11 1
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 169 9.0e-10 1
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 146 1.3e-09 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 169 2.2e-09 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 114 8.8e-09 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 111 1.1e-08 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 113 1.1e-08 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 113 1.1e-08 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 113 1.1e-08 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 113 1.1e-08 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 113 1.1e-08 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 113 1.1e-08 2
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 113 1.1e-08 2
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 113 1.1e-08 2
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 111 1.9e-08 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 157 2.1e-08 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 157 2.1e-08 1
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 155 3.2e-08 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 140 6.6e-08 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 106 7.0e-08 2
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 104 1.2e-07 2
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 105 2.4e-07 2
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 125 2.6e-07 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 98 2.7e-07 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 98 2.7e-07 2
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 95 3.2e-07 3
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 95 3.2e-07 3
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 101 3.2e-07 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 101 3.2e-07 2
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 145 4.2e-07 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 100 4.4e-07 2
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 100 4.4e-07 2
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 143 6.4e-07 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 109 6.8e-07 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 99 7.8e-07 2
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 108 1.1e-06 2
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 96 1.2e-06 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 104 1.4e-06 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 97 1.7e-06 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 97 1.7e-06 2
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 94 2.2e-06 2
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 94 2.2e-06 2
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 100 2.2e-06 2
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 96 2.5e-06 2
TAIR|locus:2115944 - symbol:AT4G05370 "AT4G05370" species... 115 3.2e-06 1
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 95 3.4e-06 2
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 96 3.4e-06 2
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 91 3.5e-06 2
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 91 3.7e-06 2
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 91 3.7e-06 2
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 91 3.7e-06 2
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 91 3.7e-06 2
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 91 3.7e-06 2
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 91 3.7e-06 2
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 91 3.8e-06 2
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 93 3.9e-06 2
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 91 4.1e-06 2
WARNING: Descriptions of 149 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 609 (219.4 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 124/272 (45%), Positives = 180/272 (66%)
Query: 27 DFLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAKR 86
D++P EV +Y Y S ++T VI+EF G NQVFEA YL + + S+ +R
Sbjct: 35 DYMPNEVHEYISHGFRRFFSYFSYQMTAVIEEFGGFEHNQVFEAAEAYLSTKISNST-RR 93
Query: 87 LRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRS 146
++V K EK+ + T++R+EE+VD+F+ V L W L+C V ++ NP D N++L+S
Sbjct: 94 IKVNKLEKQSNYSVTVERDEEVVDIFDGVKLSWILVCRHVDKK-DFRNP--RDLNSTLKS 150
Query: 147 EVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNCWDANNVVLQHAM 206
EVR YELSF KK + VL YLP V+++A ++K+ T+K+ TV + +V L H
Sbjct: 151 EVRSYELSFRKKFKNMVLESYLPFVVEQAASIKQKFKTLKIFTVDSYSVEWTSVTLDHPS 210
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
TF+ LALD E+KK +++DLD F K +Y RVG+ WKRGYLL+GPPGTGKS+LIA++ANH
Sbjct: 211 TFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIANH 270
Query: 267 LKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTL 298
L FDIY LDLT + +++L+ LL++ +R L
Sbjct: 271 LNFDIYDLDLTSLNNNAELRRLLMSTANRSIL 302
Score = 261 (96.9 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 63/119 (52%), Positives = 73/119 (61%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR---------AF--- 343
VTLSGLLNF+DG WS CG RII+F TN++EKLDPALLRPGRMD AF
Sbjct: 330 VTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVL 389
Query: 344 --NYLGISHHHLYEQM--LIMEMNGTPAEAAGELANSAEAQVSLQGLIKFLHVKLQATN 398
NYL I H L+EQ+ I E+ TPAE A +L S LQGL++FL K Q N
Sbjct: 390 ASNYLEIQDHILFEQIEEFIREIEVTPAEVAEQLMRSDSVDKVLQGLVEFLKAKKQIDN 448
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 611 (220.1 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 127/278 (45%), Positives = 183/278 (65%)
Query: 27 DFLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAKR 86
D+LP EV Y + Y SS++TI+I+EF G N+VFEA YL + + S+ KR
Sbjct: 81 DYLPDEVHHYISYGFRSIFGYFSSQMTIIIEEFEGFAHNEVFEAAEAYLATKISPSN-KR 139
Query: 87 LRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRS 146
++V K EKE + T++R+EE+VD + V +W L C V S + NP D N++LRS
Sbjct: 140 IKVSKHEKENNYNVTVERDEEVVDTYNGVKFQWILHCRHVE-SKHFHNP--RDLNSTLRS 196
Query: 147 EVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVL-RNCW----DA-NNV 200
EVR +EL+FHKK D L YLP ++K+A +K++ T+K+ T+ N + DA +V
Sbjct: 197 EVRSFELNFHKKFKDVALESYLPFMVKRATLMKQEKKTLKIFTLSPENMYGNYSDAWTSV 256
Query: 201 VLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLI 260
L H TFK LA+DS++K +++DLD F +++Y+RVG+ WKRGYLL+GPPGTGKS+LI
Sbjct: 257 TLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLI 316
Query: 261 ASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTL 298
A+MANHL FDIY L+LT + +S+L+ LL+ +R L
Sbjct: 317 AAMANHLNFDIYDLELTAVNNNSELRRLLIATANRSIL 354
Score = 238 (88.8 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 58/115 (50%), Positives = 69/115 (60%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR------------- 341
+VTLSGLLNFIDG WS CG+ RII+F TN+KEKLD ALLRPGRMD
Sbjct: 387 KVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKA 446
Query: 342 -AFNYLGISHHHLYEQML--IMEMNGTPAEAAGELANSAEAQVSLQGLIKFLHVK 393
A NYL I H L+ ++ I TPAE A +L + L+GLI+FL VK
Sbjct: 447 LALNYLEIKEHRLFSKIEEGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKVK 501
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 396 (144.5 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 72/149 (48%), Positives = 109/149 (73%)
Query: 150 HYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNCWDANNVVLQHAMTFK 209
++ELSF KKH D +LN Y+P++ KAK ++++ + LH++ W++ V+L+H TF+
Sbjct: 162 YFELSFDKKHKDLILNSYVPYIESKAKEIRDERRILMLHSLNSLRWES--VILEHPSTFE 219
Query: 210 DLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKF 269
+A++ +LK+ +I+DLD F KE+Y+RVG+ WKRGYLL+GPPGTGKS+L+A+MAN+LKF
Sbjct: 220 TMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKF 279
Query: 270 DIYHLDLTDIQFSSDLQFLLLTMPSRVTL 298
D+Y L L + SDL+ LLL +R L
Sbjct: 280 DVYDLQLASVMRDSDLRRLLLATRNRSIL 308
Score = 194 (73.4 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG 347
+TLSGLLNFIDG WS CG+ RII+F TNHK++LDPALLRPGRMD Y+G
Sbjct: 339 LTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHI--YMG 388
Score = 122 (48.0 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 30/99 (30%), Positives = 54/99 (54%)
Query: 26 NDFLPTEVQDYWYSSLHFVS-QYLSSRITIVIKEF-LGLIINQVFEATHLYLGDRTTTSS 83
++ +P +QD+ Y +L + + SS +T+ I + +G+ N+++ A YL + +
Sbjct: 32 HELIPAPLQDFIYRTLRSLFFRSSSSTLTLTIDDDNMGMN-NEIYRAAQTYLSTKISPD- 89
Query: 84 AKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLI 122
A RLR+ K K+K L E + DV+EDV L W+ +
Sbjct: 90 AVRLRISKGHKDKHVNLYLSDGEIVNDVYEDVQLVWRFV 128
Score = 80 (33.2 bits), Expect = 1.5e-74, Sum P(4) = 1.5e-74
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 342 AFNYLGISH----HHLYEQM--LIMEMNGTPAEAAGELANSAEAQVSLQGLIKFL 390
A NYLG+S H L+ ++ LI TPA+ A EL S +A V+L+GL+ L
Sbjct: 399 ASNYLGLSDAAMPHRLFPEIERLIDGEVMTPAQVAEELMKSEDADVALEGLVNVL 453
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 443 (161.0 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 97/274 (35%), Positives = 159/274 (58%)
Query: 29 LPTEVQDYWYSSLHFVSQYLSSRITIVIKEFL-GLIINQVFEATHLYLGDRTTTSSAKRL 87
+P +Q+Y S L+ S +T++I + + + N+++ A +Y+ + +A+RL
Sbjct: 35 IPPPLQNYMISYLNSFLHSTPSTLTLIIDDHIKNGMYNELYGAAQVYISTKVN-HNAERL 93
Query: 88 RVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLS--VEYINPDLEDHNASLR 145
R+ + EK E + D+++ + +KW+ C S V Y +H L
Sbjct: 94 RISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRF-CVDSNKSNMVHYFG----EH-FKLN 147
Query: 146 SEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNCWDANNVVLQHA 205
+ ELSF KKHT+ VLN Y+P+V KAK + + +K+++ +V L+H
Sbjct: 148 PDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERKILKMYSYCCMYLKWQSVNLEHP 207
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
TF +A++ ELK+ ++ DLD F K++Y+RVG+ WKRGYLL+GPPGTGK++L+A++AN
Sbjct: 208 STFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIAN 267
Query: 266 HLKFDIYHLDLTDIQFSSDLQFLLL-TMPSRVTL 298
+LKFDIY L L ++ +DL+ LLL T S + L
Sbjct: 268 YLKFDIYDLQLASVREDADLRRLLLGTTNSSILL 301
Score = 180 (68.4 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 40/71 (56%), Positives = 46/71 (64%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR------------ 341
S +TLSGLL IDG WS CG+ RI++F T HKE+LDPALLRPGRMD
Sbjct: 327 SMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFDVFK 386
Query: 342 --AFNYLGISH 350
A NYLG+SH
Sbjct: 387 TLASNYLGLSH 397
Score = 102 (41.0 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 342 AFNYLGISH---HHLYEQM--LIMEMNGTPAEAAGELANSAEAQVSLQGLIKFLHVK 393
A NYLG+SH HHLY ++ LI TPA+ A EL + + V+L+GL+K L K
Sbjct: 389 ASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEELMKNEDPDVALEGLVKVLKRK 445
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 453 (164.5 bits), Expect = 5.0e-66, Sum P(3) = 5.0e-66
Identities = 102/279 (36%), Positives = 160/279 (57%)
Query: 26 NDFLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFLGLII-NQVFEATHLYLGDRTTTSSA 84
N +P VQ++ +S L + SS +T+ I + + I ++++ A YL + + +S
Sbjct: 32 NTIIPRPVQNFVFSYLKSFAGSRSSTLTLTIDQMSSMYIPDELYAAAQAYLSTKISPNSV 91
Query: 85 KRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASL 144
RL + + EK + L E + DV+ + LKW+ + N +E++ S
Sbjct: 92 -RLIMARDPAEKKVKLYLSDGEVVSDVYNGIKLKWRFLARNKN------NTMVEEYGQSY 144
Query: 145 RSEVRH--YELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTV--LRNCWDANNV 200
+ ++ ELSF KKH D V+N Y+P+V KAK V +K+H + W + N
Sbjct: 145 QGNIQRESLELSFDKKHRDLVVNSYIPYVESKAKEVNNKRRILKMHCYSHMAQTWQSVN- 203
Query: 201 VLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLI 260
+H TF +A++ +LK+ +I+DLD F K++Y+RVG+ WKRGYLL+GPPGTGKS+L+
Sbjct: 204 -FKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLV 262
Query: 261 ASMANHLKFDIYHLDLTDIQFSSDLQFLLL-TMPSRVTL 298
A+MAN+LKFDIY L L +Q + L+ LLL T S + L
Sbjct: 263 AAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILL 301
Score = 183 (69.5 bits), Expect = 5.0e-66, Sum P(3) = 5.0e-66
Identities = 37/52 (71%), Positives = 41/52 (78%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG 347
+TLSGLLN IDG WS CG RII+F TN+KEKLDPALLRPGRMD Y+G
Sbjct: 334 LTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHI--YMG 383
Score = 66 (28.3 bits), Expect = 5.0e-66, Sum P(3) = 5.0e-66
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 342 AFNYLGISHHHLYEQMLIMEM----NG---TPAEAAGELANSAEAQVSLQGLIKFLHVK 393
A NYLG+S + L ++ +G TPA+ A EL +A +L+GL+K L K
Sbjct: 394 ASNYLGLSDENDDTHPLCPDIKHLIDGHVLTPAQVAEELMKDEDADAALEGLVKVLKRK 452
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 483 (175.1 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 111/282 (39%), Positives = 169/282 (59%)
Query: 26 NDFLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAK 85
ND +P ++ Y L+ S +T+VI E +G NQVF+A +YL ++ +A
Sbjct: 34 NDEVPERLRSYITDLLNRFFTPKSKNLTMVIDEIIGFKRNQVFDAAEVYLRNKIGPETA- 92
Query: 86 RLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLR 145
RLRVGK K+K F +++ EE++D FE+ L+W Y+ E N + +
Sbjct: 93 RLRVGKLPKQKHFTIYIEKGEEILDTFENSELRWT-----------YV----ESENEASQ 137
Query: 146 SEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTV-LRNCWDANNVV--- 201
E R+YEL+F KK D V+N YL HV+ +++ K D VKL++ +R D + +
Sbjct: 138 KEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASKDDDGMAGAG 197
Query: 202 -----LQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGK 256
L+H TF+ LA+D KK II D++ F +E+Y+RVG+ WKRGYLL+GPPGTGK
Sbjct: 198 WGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTGK 257
Query: 257 SNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTL 298
S+LIA+MAN+LKFD++ L+L+ I ++ L+ +LL+ +R L
Sbjct: 258 SSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTTNRSIL 299
Score = 191 (72.3 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 45/87 (51%), Positives = 54/87 (62%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYL-GISHHH 352
RVTLSGLLNF+DG WS G+ RII+F TNHKE+LDPALLRPGRMD +Y G+
Sbjct: 329 RVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRT 388
Query: 353 LYEQML-IMEMNGTPAEAAGELANSAE 378
L L + +N E L +S E
Sbjct: 389 LVSNYLGLGGLNHPLCEEIEALIDSTE 415
Score = 75 (31.5 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 344 NYLGIS--HHHLYEQM--LIMEMNGTPAEAAGELANSAEAQVSLQGLIKFL 390
NYLG+ +H L E++ LI TPAE A EL + V L+G++ F+
Sbjct: 392 NYLGLGGLNHPLCEEIEALIDSTEVTPAELAEELMQEDDTDVVLRGVVSFV 442
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 483 (175.1 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 113/282 (40%), Positives = 170/282 (60%)
Query: 26 NDFLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAK 85
+DF+P +++ Y+ S L S +T++I E GL NQVF+A +YL + + +
Sbjct: 33 HDFVPEKLRSYFSSLLDRFFTPKSKYLTVIIDENFGLNRNQVFDAAEMYLRSKIGPET-E 91
Query: 86 RLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLR 145
RLRVGK K+K F +++R EE++D FE+ +KW Y+ + E +
Sbjct: 92 RLRVGKIPKQKHFTISIERGEEILDTFEESEVKWS-----------YVQSENEKGD---- 136
Query: 146 SEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHT--VLRNCWD----ANN 199
R+YEL+F KK D VLN YL HV+ +++ +K + VKL++ V + D N
Sbjct: 137 KVKRYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYSRDVYASDDDDGMAGGN 196
Query: 200 ---VVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGK 256
+ L+H TF LA+D KK II DL+ F KE+Y+RVG+ WKRGYLL+GPPGTGK
Sbjct: 197 WGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGK 256
Query: 257 SNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTL 298
S+LIA+MAN+LKFD++ L+L+ I + +L+ +LL+ +R L
Sbjct: 257 SSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSIL 298
Score = 189 (71.6 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 44/87 (50%), Positives = 55/87 (63%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYL-GISHHH 352
+VTLSG+LNFIDG WS G+ RII+F TNHKE+LDPALLRPGRMD +Y G+
Sbjct: 325 KVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTGLGFRT 384
Query: 353 LYEQMLIME-MNGTPAEAAGELANSAE 378
L L ++ +N E L +S E
Sbjct: 385 LVSNYLGLDGLNHPLCEEIEALVDSTE 411
Score = 75 (31.5 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 344 NYLGIS--HHHLYEQM--LIMEMNGTPAEAAGELANSAEAQVSLQGLIKFL 390
NYLG+ +H L E++ L+ TPAE A EL + V L+G+I F+
Sbjct: 388 NYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDDDTDVVLRGVISFV 438
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 382 (139.5 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 89/287 (31%), Positives = 157/287 (54%)
Query: 26 NDFLPTEVQDYW-YSSLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSA 84
N+ +P +++Y ++ F S Y S T VI++ + NQ F A +YL S
Sbjct: 33 NEIVPKRIREYIAMKAVDFFSSYFQSDFTFVIEQRWEFVENQTFRAAEVYLPTCLAGLST 92
Query: 85 KRLRVGKSEKEKTF---RTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHN 141
+L VG S + + + N +++D FE + L+W L + +Y+ P
Sbjct: 93 GKLLVGSSNLKNPAAEPKLGIPVNTKIIDNFEGIHLEWTLHSVETK---KYL-P------ 142
Query: 142 ASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVL--RNCWDANN 199
E R++ L+ K+ + ++ Y ++ K A+ + +K++T R+ W++
Sbjct: 143 -----EKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRENLKIYTYNQDRSKWES-- 195
Query: 200 VVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNL 259
+ +H TF+ LA++ +LKK +I DLD F GK++++ VGR WKRGYLL+GPPGTGKS++
Sbjct: 196 AIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFFKSVGRAWKRGYLLYGPPGTGKSSM 255
Query: 260 IASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFID 306
+A++ANH+K+ IY L + ++ +L+ +L + +R L L+ ID
Sbjct: 256 VAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSIL--LIEDID 300
Score = 245 (91.3 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 56/114 (49%), Positives = 72/114 (63%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR---------AFN-- 344
++LSGLLNF+DG WS CGE +II+F TNHKEKLDPALLRPGRMD F
Sbjct: 336 ISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKL 395
Query: 345 ---YLGISHHHLYE--QMLIMEMNGTPAEAAGELANSAEAQVSLQGLIKFLHVK 393
YL H L++ + LI+E++ TPAE +L S A ++L+GL +FL K
Sbjct: 396 VALYLKTDEHVLFDPIEKLILEVSSTPAEVTQQLMASKNADIALKGLAEFLENK 449
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 444 (161.4 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 105/289 (36%), Positives = 169/289 (58%)
Query: 33 VQDYWYSSLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKS 92
V+ Y++ + ++S Y+ + T E GL +Q +++ YL ++T + AKRL+ ++
Sbjct: 37 VERYFHKMIGWISYYVDIKFTEYTDE--GLKRSQAYDSIRNYLASKST-ALAKRLKANET 93
Query: 93 EKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRSEVRHYE 152
+ K+ ++D +EE+ D FE V +KW +V+ I P ++ E RH+
Sbjct: 94 KNSKSLVFSMDDHEEIEDEFEGVKVKWYS-------NVKVIQPQ-SNYGQRSSEERRHFT 145
Query: 153 LSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC----WDA---NNVVLQHA 205
LSFH++H ++ YL HVL++ KA+ KL+T + W + +NV H
Sbjct: 146 LSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNNSSQEWYPWRSGKWSNVPFHHP 205
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
TF+ LA+D E K+ I KDL F GK+YY++VG+ WKRGYLLFGPPGTGKS +IA++AN
Sbjct: 206 ATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIAN 265
Query: 266 HLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGE 314
L +D+Y L+LT ++ +S+L+ LLL S+ + ++ ID S G+
Sbjct: 266 FLDYDVYDLELTTVKDNSELKKLLLDTTSKSII--VIEDIDCSLDLTGQ 312
Score = 167 (63.8 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 45/103 (43%), Positives = 59/103 (57%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR---------AF- 343
S+VTLSGLLN IDG WS C +II+F TN +KLDPAL+R GRMD AF
Sbjct: 342 SKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFK 401
Query: 344 ----NYLGISHHHLYEQM--LIMEMNGTPAEAAGELANSAEAQ 380
NYL I H LY ++ + E + +PA+ A L ++ +
Sbjct: 402 VLAKNYLEIETHDLYGEIERKLEETDMSPADVAETLMPKSDEE 444
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 410 (149.4 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 100/273 (36%), Positives = 157/273 (57%)
Query: 28 FLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFL---GLIINQVFEATHLYLGDRTTTSSA 84
F+P +++DY + + +S+ + I E+ GL +Q ++ YL ++T + A
Sbjct: 28 FVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKSQAYDLIRNYLSSKST-ARA 86
Query: 85 KRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASL 144
+RL+ +S+ K+ +LD +E + DVF+ V + W L SV N D D
Sbjct: 87 QRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWSL-------SVWKSN-DQADS---- 134
Query: 145 RSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRN----CWDA--- 197
SE R+ LSFH ++ + + YL HVL++ K + KL+T + W
Sbjct: 135 -SEKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQDYSAWREGRW 193
Query: 198 NNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKS 257
+NV H TF+ LA+D E K+ + KDL F GK+YYR+VG+ WKRGYLLFGPPGTGKS
Sbjct: 194 SNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYLLFGPPGTGKS 253
Query: 258 NLIASMANHLKFDIYHLDLTDIQFSSDLQFLLL 290
+I++MAN L++D+Y L+LT ++ +S+L+ L+L
Sbjct: 254 TMISAMANFLEYDVYDLELTTVKDNSELKKLML 286
Score = 174 (66.3 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 45/96 (46%), Positives = 58/96 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR---------AF- 343
S+VTLSGLLN IDG WS C +II+F TN+ +KLDPAL+R GRMD AF
Sbjct: 341 SKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEAFK 400
Query: 344 ----NYLGISHHHLYEQM--LIMEMNGTPAEAAGEL 373
NYL I H L+ ++ L+ E + +PA+ A L
Sbjct: 401 VLAKNYLEIESHDLFGEIKRLVEETDMSPADVAENL 436
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 396 (144.5 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 92/266 (34%), Positives = 149/266 (56%)
Query: 38 YSSLHFVSQYLSSRI-TIV---IKEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSE 93
Y+SL + I TI+ I+ F+ I + YL + + ++K LR+ +
Sbjct: 17 YASLAGYIMMIKPMIHTIIPRPIQNFVFSYIKSFVGSPQAYLSSKISPDASK-LRMTRDP 75
Query: 94 KEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRSEVRHYEL 153
K L + E + DV++ + LKW+ + + + + + E+ + + +EL
Sbjct: 76 NNKNVNLHLSQGEVVSDVYKGIELKWRYLEGRNKKTT-VVGEETEEAIVNWQC----FEL 130
Query: 154 SFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLAL 213
SF KKH D V+ Y+ +V +KAK +KE+ +K+H+ +V +H TF +A+
Sbjct: 131 SFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKMHSYSSYTLRWQSVKFEHPSTFHTMAM 190
Query: 214 DSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYH 273
+LK +++DLD F K+YY+RVG+ WKR Y L+GPPGTGKS+L+A+MAN+LKFDIY
Sbjct: 191 TPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANYLKFDIYD 250
Query: 274 LDLTDIQFSSDLQFLLL-TMPSRVTL 298
L L ++Q + L+ LLL T S + L
Sbjct: 251 LQLANVQGDAQLRSLLLATNNSSILL 276
Score = 177 (67.4 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYE 355
+TLSGLLN IDG WS CG+ RI++F TN+KE LDPALLRPG MD YLG H +E
Sbjct: 306 LTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHI--YLG---HCSFE 360
Query: 356 QMLIMEMN--GTPAEA 369
I+ N G P ++
Sbjct: 361 GFKILASNYLGMPHDS 376
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 351 (128.6 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 95/299 (31%), Positives = 157/299 (52%)
Query: 27 DFLPTEVQDYWYS---SLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSS 83
+FL + +Q + S F++ + S + I ++ N F A YLG + T
Sbjct: 35 EFLISTIQQLSFVQRFSDRFIN-FFSPYVEISFSQYEDYQFNHAFAAIETYLGAKAT-DK 92
Query: 84 AKRLRVGKSEKEKTFRTTLDRNEEMV-DVFEDVTLKWKLICTQVPLSVEYINPDLEDHNA 142
AK LR + ++ K L R+E V D +E T+ W ++E +
Sbjct: 93 AKHLRASQVKESKGL--VLKRDETKVRDEYEGGTVWW----------------EMETDST 134
Query: 143 SLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC-WDANN-- 199
R+ ++L+FH++ D V + Y+ +V ++ K+++ +KL T + W +
Sbjct: 135 GYRT----FKLTFHRRSRDIVTDSYIKYVFEEGKSIQAKSKQMKLFTNNPSSHWGTSKKS 190
Query: 200 ----VVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTG 255
+ +H +F LA+D++ K+ I+ DL F NGKEYY+++G+ WKRGYLL GPPGTG
Sbjct: 191 FWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTG 250
Query: 256 KSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGE 314
KS +IA+MANHL + IY L+LT I+ +S+L+ LL S+ + ++ ID S G+
Sbjct: 251 KSTMIAAMANHLNYSIYDLELTAIRNNSELRKLLTATSSKSII--VIEDIDCSLDLTGK 307
Score = 201 (75.8 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 52/113 (46%), Positives = 65/113 (57%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR---------AF- 343
S VTLSGLLNFIDG WS CG+ RII+F TNH EKLDPAL+R GRMD AF
Sbjct: 330 SFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFK 389
Query: 344 ----NYLGISHHHLYEQM--LIMEMNGTPAEAAGELANSAEAQVSLQGLIKFL 390
NYL + H L++++ L+ E PA+ A L ++ G +K L
Sbjct: 390 ILAKNYLDLDTHPLFKKIESLLKETKIAPADVAENLMKK-NTEIDADGSLKDL 441
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 349 (127.9 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 91/280 (32%), Positives = 151/280 (53%)
Query: 43 FVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTL 102
F++ + S + I E+ +N F+ YLG + T AK LR + + K L
Sbjct: 53 FIN-FFSPYVQINFSEYEDYRVNHAFDPIETYLGAKAT-DKAKHLRASQVRESKGL--VL 108
Query: 103 DRNEEMV-DVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTD 161
R+E V D +E + + W ++E +A ++ +L+FH++ D
Sbjct: 109 KRDETKVRDEYEGIRVWW----------------EMETDSAGYKT----LKLTFHRRSRD 148
Query: 162 TVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC-WDANN------VVLQHAMTFKDLALD 214
V N Y+ +V+++ K++ +KL T + W ++ + +H TF+ LA+D
Sbjct: 149 IVTNSYIKYVVEEGKSIDAKNKKMKLFTNNPSSHWGSSKTSFWRYIDFEHPATFETLAMD 208
Query: 215 SELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHL 274
+ K+ I+ DL F NGK+YY+++G+ WKRGYLL+GPPGTGKS +IA+MAN L + IY L
Sbjct: 209 PKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDL 268
Query: 275 DLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGE 314
+LT IQ +S+L+ +LT S ++ ++ ID S G+
Sbjct: 269 ELTAIQNNSELR-KILTATSNKSII-VIEDIDCSLDLTGK 306
Score = 194 (73.4 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 49/96 (51%), Positives = 58/96 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR---------AF- 343
S VTLSGLLNFIDG WS CG+ RII+F TNH KLDPAL+R GRMD AF
Sbjct: 330 SFVTLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFK 389
Query: 344 ----NYLGISHHHLYEQM--LIMEMNGTPAEAAGEL 373
NYL + H L+ ++ L+ E N PA+ A L
Sbjct: 390 TLAKNYLDLDSHPLFSKIESLMKETNIAPADVAENL 425
Score = 45 (20.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 152 ELSFHKKHTDTVLNLYLPHV 171
++SF K+ +D +N + P+V
Sbjct: 42 QISFAKRFSDKFINFFSPYV 61
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 379 (138.5 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 100/292 (34%), Positives = 157/292 (53%)
Query: 41 LHFVSQY---LSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSA-------KRLRVG 90
LHF+++ SS I I E G+ N+++ A LYL T + A RL +
Sbjct: 35 LHFLTRIRHVFSSHIYFDITEIDGVNTNELYNAVQLYLSSSVTVNDAVSSSNNNTRLSLT 94
Query: 91 KSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRSEVRH 150
+ + L N+ + DVF VT+ W+ + Q + P + E R
Sbjct: 95 RVPNSSSVTFGLSNNDRITDVFNGVTILWEHVVVQRQVQSFSWRP--------MPEEKRG 146
Query: 151 YELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC-WDA-----NNVVLQH 204
+ L +K+ VL+ YL +++ K++ ++ L+T R DA ++V +H
Sbjct: 147 FTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEERLLYTNSRGVSLDARSHPWDSVRFKH 206
Query: 205 AMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
TF LA+D E KK I++DL F NG+ +Y++ GR WKRGYLL+GPPGTGKS+LIA+MA
Sbjct: 207 PSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKTGRAWKRGYLLYGPPGTGKSSLIAAMA 266
Query: 265 NHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGEGR 316
N+L +DIY L+LT++Q +S+L+ LL+ S+ + ++ ID S S G+
Sbjct: 267 NYLGYDIYDLELTEVQNNSELRKLLMKTSSKSII--VIEDIDCSISLTKRGK 316
Score = 163 (62.4 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 32/46 (69%), Positives = 35/46 (76%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD 339
S VTLSGLLNF DG WS CG +I +F TNH EKLD AL+R GRMD
Sbjct: 341 SSVTLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDSALMRSGRMD 386
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 367 (134.2 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 88/272 (32%), Positives = 144/272 (52%)
Query: 30 PTEVQDYWYSSLHFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAKRLRV 89
P E++ + + + SS I E G+ N+++ A LYL + + + RL +
Sbjct: 27 PPELRFAFLKFFNRIFHVFSSYCYFDITEIDGVNTNELYNAVQLYLSS-SVSIAGNRLSL 85
Query: 90 GKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRSEVR 149
++ + L N+ +VD F VT+ W+ + TQ P L E R
Sbjct: 86 TRAVNSSSITFGLSNNDSIVDTFNGVTVLWEHVVTQRQTQTFAWRP--------LPEEKR 137
Query: 150 HYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRN-CWDAN-----NVVLQ 203
+ L KK +LN YL +++++A ++ L+T R D+ +V +
Sbjct: 138 GFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFK 197
Query: 204 HAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASM 263
H TF+ LA+D K+ I+ DL F G+ +Y++ GR WKRGYLL+GPPGTGKS++IA+M
Sbjct: 198 HPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSSMIAAM 257
Query: 264 ANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSR 295
AN+L +DIY L+LT++ +S+L+ LL+ S+
Sbjct: 258 ANYLGYDIYDLELTEVHSNSELRKLLMKTSSK 289
Score = 174 (66.3 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 33/48 (68%), Positives = 36/48 (75%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
+TLSGLLNF DG WS CG RI +F TNH EKLDPALLR GRMD +
Sbjct: 345 ITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIY 392
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 373 (136.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 95/277 (34%), Positives = 157/277 (56%)
Query: 28 FLPTEVQDYWYSSLH-FVSQYL---SSRITIVIKEFLG--LIINQVFEATHLYLGDRTTT 81
F+P ++++Y +++ ++ + S+ + I E+ G L ++ ++ YL +T
Sbjct: 14 FVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYDEIGNYLSS-IST 72
Query: 82 SSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLED-H 140
+ AKRL+ +SE K+ LD +E +V VF+ V + W T V D ED H
Sbjct: 73 ARAKRLKAKESENSKSLVLCLDDDEAVVVVFQGVNVVWS--STVV---------DKEDKH 121
Query: 141 NASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHT-----VLRNCW 195
N+ E R+ L+F H D + N Y+ HVL++ K + KL+T + W
Sbjct: 122 NSK---EGRYLTLTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWW 178
Query: 196 DA--NNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
+ +NV H +F+ L +D + K+ I KDL F GK+YYR+V + WKRGYLLFGPPG
Sbjct: 179 EGLWSNVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPG 238
Query: 254 TGKSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLL 290
TGKS +I+++AN L++D+Y L+LT ++ +++L+ L+L
Sbjct: 239 TGKSTMISAIANFLEYDVYDLELTTVKDNAELKKLML 275
Score = 166 (63.5 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 44/96 (45%), Positives = 56/96 (58%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR---------AF- 343
S VTLSGLLN IDG WS C + +II+F TN + LDPAL+R GRMD AF
Sbjct: 326 SNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGRMDYHIEMSYCRFEAFK 385
Query: 344 ----NYLGISHHHLYEQM--LIMEMNGTPAEAAGEL 373
NYL H LY ++ L+ E++ +PA+ A L
Sbjct: 386 VLAKNYLENESHDLYGEIGRLLEEVDVSPADVAENL 421
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 357 (130.7 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 84/246 (34%), Positives = 136/246 (55%)
Query: 56 IKEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDV 115
I E G+ N+++ A LYL + + + RL + ++ + L N+ +VD F V
Sbjct: 53 ITEIDGVNTNELYNAVQLYLSS-SVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSV 111
Query: 116 TLKWKLICTQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKA 175
T+ W+ I TQ P + E R + L KK + +L+ YL ++++KA
Sbjct: 112 TVVWEHIVTQRQTQTFAWRP--------MPEEKRGFTLRIKKKDKNLILDSYLDYIMEKA 163
Query: 176 KAVKEDCNTVKLHTVLRN-CWDAN-----NVVLQHAMTFKDLALDSELKKMIIKDLDIFR 229
++ L+T R D+ +V +H TF LA+D K+ I++DL F
Sbjct: 164 NEIRRLNQDRLLYTNSRGGSLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFA 223
Query: 230 NGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLL 289
+ +Y R GR WKRGYLL+GPPGTGKS++IA+MAN+L++DIY L+LT+++ +S+L+ LL
Sbjct: 224 ECQSFYERTGRAWKRGYLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSELRKLL 283
Query: 290 LTMPSR 295
+ S+
Sbjct: 284 MKTSSK 289
Score = 174 (66.3 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 48/101 (47%), Positives = 56/101 (55%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYLGISHHH-L 353
+TLSGLLNF DG WS CG RI +F TNH EKLDPALLR GRMD +Y S L
Sbjct: 336 ITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKIL 395
Query: 354 YEQMLIME---MNGTPAEAAGELANSAE---AQVSLQGLIK 388
L E +N + E+ + AE A VS + LIK
Sbjct: 396 LRNYLGFEEGDLNDVVLKELAEVVDRAEITPADVS-EALIK 435
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 352 (129.0 bits), Expect = 7.9e-49, Sum P(2) = 7.9e-49
Identities = 89/297 (29%), Positives = 156/297 (52%)
Query: 28 FLPTEVQDYWYSSLHFVSQYLSSRITIVIKEFLGLIINQ--VFEATHLYLGDRTTTSSAK 85
F P +++++ + ++ I I E+ G + V++A YL + ++S AK
Sbjct: 28 FFPYRLREHFEPLAQSLIGFIYPYIQITFHEYSGERFKRSDVYDAIQSYLS-KDSSSRAK 86
Query: 86 RLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLR 145
+L + K+ ++D +EE+ D F+ V + W+ Q P +
Sbjct: 87 KLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKHQSESRAISFYPKAD------- 139
Query: 146 SEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHT--VLRNCWDA------ 197
E R Y L FH++ + + YL HV+ + K ++ KL++ +N W
Sbjct: 140 -ESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNNPSQN-WSGYKQTKW 197
Query: 198 NNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKS 257
++V +H TF LA++ + K+ I DL F N K+YY+++G+ WKRGYLLFGPPGTGKS
Sbjct: 198 SHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKRGYLLFGPPGTGKS 257
Query: 258 NLIASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGE 314
+IA+MAN L++D+Y L+LT ++ +++L+ LL+ + + ++ ID S G+
Sbjct: 258 TMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSII--VIEDIDCSLDLTGQ 312
Score = 175 (66.7 bits), Expect = 7.9e-49, Sum P(2) = 7.9e-49
Identities = 36/55 (65%), Positives = 42/55 (76%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYLG 347
S+VTLSGLLNFIDG WS CG RII+F TN +KLDPAL+R GRMD+ +Y G
Sbjct: 343 SKVTLSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCG 397
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 352 (129.0 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 84/273 (30%), Positives = 147/273 (53%)
Query: 52 ITIVIKEFLGLIINQVFEATHLYLG-----DRTTTSSAKRLRVGKSEKEKTFRTTLDRNE 106
I I E+ G + F+ + YLG + +++ AK+L+ ++ K+ ++D E
Sbjct: 51 IQITFHEYSG----EHFKRSEAYLGIQSYLSKDSSARAKKLKANTTKGSKSIVLSMDDKE 106
Query: 107 EMVDVFEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNL 166
E+ D FE + + W+ P+ +E R+Y L FH++ + ++
Sbjct: 107 EITDDFEGIRVWWQSKKEGATRQSFSFYPEA--------NEKRYYMLRFHRRDREVIIER 158
Query: 167 YLPHVLKKAKAVKEDCNTVKLHTVLRNCWDANN-----VVLQHAMTFKDLALDSELKKMI 221
YL HV+++ K +++ KL++ NN V +H TF LA++ K+ I
Sbjct: 159 YLEHVMREGKTIEQKNRERKLYSNTPGQSHGNNSKWSHVTFEHPATFDTLAMEENKKEEI 218
Query: 222 IKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQF 281
DL F K+YY+++G+ WKRGYLLFGPPGTGKS +IA+MAN L++D+Y L+LT ++
Sbjct: 219 KSDLIKFSKSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLEYDVYDLELTTVKD 278
Query: 282 SSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGE 314
++ L+ LL+ ++ + ++ ID S + G+
Sbjct: 279 NTHLRRLLIETSAKSII--VIEDIDCSLNLTGQ 309
Score = 173 (66.0 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 34/47 (72%), Positives = 39/47 (82%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
S+VTLSGLLNFIDG WS CG RII+F TN +KLDPAL+R GRMD+
Sbjct: 341 SKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDK 387
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 332 (121.9 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 85/240 (35%), Positives = 132/240 (55%)
Query: 65 NQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLDRNEEMV-DVFEDVTLKWKLIC 123
NQ F A YL D T K LR G KE L RNE V D ++ + W+ +
Sbjct: 79 NQAFSAIDTYL-DSKATDKTKHLR-GSQVKESK-GLVLKRNEAKVRDEYKGANVWWERV- 134
Query: 124 TQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAV----K 179
V+ D N R+Y+L+FH + + N Y+ +V+++ K++ K
Sbjct: 135 ------VD------NDGN-------RYYKLTFHNRARTLITNSYIKYVVEEGKSIIVKNK 175
Query: 180 ED---CNTVKLHTVL-RNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYY 235
+ N + V +N W ++ +H +F+ LA+D + K+ I+ DL F NGKEYY
Sbjct: 176 QTRLFTNNLSTQWVFGQNMW--RSIEFEHPASFQTLAMDPKKKEEIVNDLIAFSNGKEYY 233
Query: 236 RRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSR 295
+++G+ WKRGYLL+GPPGTGKS +I++MAN L ++IY L+LT ++ +S+L+ LL S+
Sbjct: 234 KKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKKLLTATSSK 293
Score = 181 (68.8 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYE 355
VTLSGLLNFIDG WS CG+ RI++F TNH EKLDPAL+R GRMD ++ +S+ YE
Sbjct: 332 VTLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDM----HIELSYC-TYE 386
Query: 356 QMLIMEMN 363
I+ N
Sbjct: 387 AFKILAKN 394
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 279 (103.3 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
Identities = 75/238 (31%), Positives = 119/238 (50%)
Query: 65 NQVFEATHLYLGDRTT--TSSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLI 122
N +++ ++YL ++ S L GK E R LDRN+ + D F + W
Sbjct: 63 NHLYQKVYMYLNSLSSIENSDFTNLFTGKKSNEIILR--LDRNQVVGDEFLGARVCW--- 117
Query: 123 CTQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDC 182
IN + ED R++ L K +L YL H+ + +++
Sbjct: 118 ----------INGEDEDG-------ARNFVLKIRKADKRRILGSYLQHIHTVSDELEQRN 160
Query: 183 NTVKL--------HTVLRNCWDAN--NVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGK 232
+KL H + + ++ H TF ++A++++LK + DL+ F GK
Sbjct: 161 TELKLFINVGIDDHLNKKKKKNGRWRSIPFDHPCTFDNIAMETDLKNKVKSDLESFLKGK 220
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLL 290
+YY R+GRVWKR YLL+GP GTGKS+ +A+MAN L +D+Y +DL+ + SDL+ LLL
Sbjct: 221 QYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDDSDLKMLLL 278
Score = 145 (56.1 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
Identities = 43/107 (40%), Positives = 56/107 (52%)
Query: 284 DLQFLLLTMPSRVTLSGLLNFIDGSWSWC-GEGRIILFWTNHKEKLDPALLRPGRMDQR- 341
DL L T + V LSG+LNF D S C + RI++F KE++DPA+LRPGR+D
Sbjct: 290 DLDRHLSTKSTAVNLSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHI 349
Query: 342 --------AF-----NYLGISHHHLYEQMLIMEMNGTPAEAA--GEL 373
AF NYLG+ H L+ Q+ + NG A GEL
Sbjct: 350 HFPLCDFTAFKTLANNYLGVKEHKLFSQVEGIFQNGASLSPAEIGEL 396
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 332 (121.9 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 85/241 (35%), Positives = 133/241 (55%)
Query: 151 YELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC--WDANNVVLQHAMTF 208
+EL F +KH D V + Y+P V KAK +K +++HT C W+ +L H +F
Sbjct: 107 FELRFDEKHRDLVFDSYIPFVESKAKEIKSKKRILEMHTYSHCCDTWETK--ILDHHSSF 164
Query: 209 KDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
+ + + +LK+ +I D+D+F + +++Y+RVGR W R YLL G PG GK++L+A++A +L
Sbjct: 165 ETIVMKEDLKRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLN 224
Query: 269 FDIYHLDL---TD------IQFSSDLQFLLLT------MPSRVTLSGLLNFIDGSWSWC- 312
FD+Y++ TD I+ D LL+ S+V LS LL+ + +W W
Sbjct: 225 FDVYNITQGVKTDFDTRRLIRRVEDSSILLVEDIDTSLEGSKVALSQLLSSL--TWPWSN 282
Query: 313 GEGRIILFWTNHKEKLDPALLRPGRMDQRAF--------------NYLGISH-----HHL 353
G+ R+++F TN+KE+ D LL RM+ + + NYLGISH H L
Sbjct: 283 GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFKTLASNYLGISHDNDAPHRL 340
Query: 354 Y 354
Y
Sbjct: 341 Y 341
Score = 81 (33.6 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 342 AFNYLGISH-----HHLYEQM--LIMEMNGTPAEAAGELANSAEAQVSLQGLIKF 389
A NYLGISH H LY + LI TP + EL S + V+LQ L+++
Sbjct: 324 ASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDVALQSLVRY 378
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 89/284 (31%), Positives = 143/284 (50%)
Query: 44 VSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLD 103
+ ++ S I +E G N F A YLG + S K L+ G KE L
Sbjct: 52 ILEFFSPYAYIRFREIEGYRYNYAFAAVKTYLGAKVN-SEVKNLK-GNQVKEN-MSLDLK 108
Query: 104 RNEEMVDV-FEDVTLKWKLICTQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDT 162
R++ ++ +E V + W++ ++ + + L+FH+ + D
Sbjct: 109 RDDVKIEEEYEGVKMWWEIF-------------------RCVKGK-KICRLTFHRSNWDV 148
Query: 163 VLNLYLPHVLKKAKAVKED-------CNTVKLH--TVLRNCWDANNVVLQHAMTFKDLAL 213
V YL +V+++ K++K N L+ T ++ W +H TF LA+
Sbjct: 149 VTGSYLRYVVEEGKSIKARKKKVMVLMNNPSLNWKTSMKGLWTCTE--FEHPATFDTLAM 206
Query: 214 DSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYH 273
D + K I +DL FR+GKEYY R+G+ WKRGYLL+GPPGTGKS +IA+MAN +K++IY
Sbjct: 207 DIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYD 266
Query: 274 LDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGEGRI 317
L+LT I + +L+ LL+ ++ + ++ ID S GE +
Sbjct: 267 LELTSIGNNWELKKLLIATTNKSII--VIEDIDCSLDLTGEREV 308
Score = 212 (79.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/134 (45%), Positives = 76/134 (56%)
Query: 274 LDLTDIQFSSDLQFLLLTMPSR-VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPAL 332
LDLT + DL+ S VTLSGLLNFIDG WS CG+ RI++F TNH KLD AL
Sbjct: 300 LDLTGEREVKDLKGDKEGKKSNAVTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQAL 359
Query: 333 LRPGRMDQR---------AF-----NYLGISHHHLYEQM--LIMEMNGTPAEAAGELANS 376
+R GRMD AF NYL I HHL+ ++ L+ E TPA+ A + +
Sbjct: 360 IRRGRMDMHIELSYCTFGAFKILAKNYLNIDSHHLFGEIESLLKETKITPADVAEHMM-A 418
Query: 377 AEAQVSLQGLIKFL 390
E SL+GLI+ L
Sbjct: 419 KEVDGSLKGLIRAL 432
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 248 (92.4 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 57/115 (49%), Positives = 73/115 (63%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD--------------Q 340
+VTLSGLLNF+DG WS C E RII+F TNHKEKLDPALLRPGRMD +
Sbjct: 123 KVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIVFKK 182
Query: 341 RAFNYLGISHHHLYE--QMLIMEMNGTPAEAAGELANSAEAQVSLQGLIKFLHVK 393
A YL I H L++ + + +E+ TPAE +L S + V+L+GL++FL K
Sbjct: 183 LAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESK 237
Score = 235 (87.8 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 51/133 (38%), Positives = 84/133 (63%)
Query: 213 LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIY 272
++ ELK +I+DLD F NGK++++ VGR WKRGYLL+GPPGTGKS+L+A++AN + + IY
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 273 HLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFID--GSWSWCG-EGRIILFW---TNHKE 326
L + ++ + L+ +L + +R L L+ +D G+ + C E + + N K+
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSIL--LIEDLDCSGADTTCRKENKDETEYGENQNKKK 118
Query: 327 KLDPALLRPGRMD 339
K DP + G ++
Sbjct: 119 KKDPKVTLSGLLN 131
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 161 (61.7 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 35/100 (35%), Positives = 60/100 (60%)
Query: 211 LALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFD 270
+ L+S +KKMI D+ F ++Y G ++RGYLL+GPPG+GK++ + ++A L +D
Sbjct: 210 VVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYD 269
Query: 271 IYHLDLTDIQFSSD-LQFLLLTMPSRVTLSGLLNFIDGSW 309
I L+L + + D L LL +P + + LL +D ++
Sbjct: 270 ICVLNLAEKGLTDDRLNHLLSNVPPKAVV--LLEDVDSAF 307
Score = 150 (57.9 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 42/97 (43%), Positives = 55/97 (56%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHL 353
+ VT SGLLN +DG S + RII TNH EKLDPAL+RPGR+D +A YLG +
Sbjct: 320 ANVTFSGLLNALDGVTS--SDERIIFMTTNHPEKLDPALVRPGRVDVKA--YLGNATPEQ 375
Query: 354 YEQMLIMEMNGTPAEAAGELANSA----EAQVSLQGL 386
+M +P E A +L++ + SLQGL
Sbjct: 376 VREMFTRFYGHSP-EMADDLSDIVCPKNTSMASLQGL 411
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 159 (61.0 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 45/144 (31%), Positives = 76/144 (52%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
++L++A+A+ +E+ TV ++T + + W + + L L I+KD+
Sbjct: 149 NILEEARALALQQEEGKTV-MYTAVGSEWRTFGYP-RRRRPLDSVVLQQGLADRIVKDIR 206
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 266
Query: 286 QFLLLTMPSRVTLSGLLNFIDGSW 309
LL P + + LL +D ++
Sbjct: 267 NHLLSVAPQQSLV--LLEDVDAAF 288
Score = 140 (54.3 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 39/91 (42%), Positives = 50/91 (54%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TNH ++LDPAL+RPGR+D + Y+G H
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDLK--EYVGYCSHWQL 361
Query: 355 EQMLIMEMNG-TP--AEAAGELANSAEAQVS 382
QM G P AE E A +Q+S
Sbjct: 362 TQMFQRFYPGQAPSLAENFAEHVLKATSQIS 392
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 154 (59.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 43/144 (29%), Positives = 75/144 (52%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
++L++A+ + +E+ TV ++T + + W + + L L I++D+
Sbjct: 149 NILEEARELALQQEEGKTV-MYTAVGSEWRPFGYP-RRRRPLNSVVLQQGLADRIVRDVQ 206
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L
Sbjct: 207 EFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 266
Query: 286 QFLLLTMPSRVTLSGLLNFIDGSW 309
LL P + + LL +D ++
Sbjct: 267 NHLLSVAPQQSLV--LLEDVDAAF 288
Score = 140 (54.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 36/84 (42%), Positives = 46/84 (54%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TNH ++LDPAL+RPGR+D + Y+G H
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLK--EYVGYCSHWQL 361
Query: 355 EQMLIMEMNGTPAEAAGELANSAE 378
QM P +A N AE
Sbjct: 362 TQMF---QRFYPGQAPSLAENFAE 382
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 159 (61.0 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 45/144 (31%), Positives = 76/144 (52%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
++L++A+A+ +E+ TV ++T + + W + + L L I+KD+
Sbjct: 149 NILEEARALALQQEEGKTV-MYTAVGSEWRTFGYP-RRRRPLDSVVLQQGLADRIVKDIR 206
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 266
Query: 286 QFLLLTMPSRVTLSGLLNFIDGSW 309
LL P + + LL +D ++
Sbjct: 267 NHLLSVAPQQSLV--LLEDVDAAF 288
Score = 133 (51.9 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TN+ ++LDPAL+RPGR+D + Y+G H
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLK--EYVGYCSHWQL 361
Query: 355 EQMLIMEMNGTPAEAAGELANSAE 378
QM P +A N AE
Sbjct: 362 TQMF---QRFYPGQAPSLAENFAE 382
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 162 (62.1 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
+++++AK + KE+ T+ ++T + W + + LD ++II+D+
Sbjct: 167 NLIEEAKEMALEKEEGKTL-IYTSMGTDWRRFGHP-RRKRPISSVILDKGKSELIIQDVK 224
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFS-SDL 285
F N ++Y G ++RGYLL+GPPGTGKS+ I ++A L+ I L+L S + L
Sbjct: 225 KFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSL 284
Query: 286 QFLLLTMPSRVTLSGLLNFIDGS 308
LL T P R + LL ID +
Sbjct: 285 NQLLATAPQRSII--LLEDIDSA 305
Score = 130 (50.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHL 353
S +T SGLLN +DG + EGRI+ TNH EKLD L+RPGR+D + +G+ +
Sbjct: 346 SALTFSGLLNALDGVAA--SEGRILFMTTNHLEKLDKVLIRPGRVDLQI--EIGLCSSYQ 401
Query: 354 YEQMLI 359
EQM +
Sbjct: 402 MEQMFL 407
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 151 (58.2 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 43/144 (29%), Positives = 75/144 (52%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
++L++A+ + +E+ TV ++T + + W + + L L I++D+
Sbjct: 149 NILEEARELALQQEEGKTV-MYTAMGSEWRPFGYP-RRRRPLTSVVLGQGLADRIVRDVR 206
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L
Sbjct: 207 EFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 266
Query: 286 QFLLLTMPSRVTLSGLLNFIDGSW 309
LL P + + LL +D ++
Sbjct: 267 NHLLSVAPQQSLV--LLEDVDAAF 288
Score = 140 (54.3 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TNH ++LDPAL+RPGR+D + Y+G H
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMK--EYVGYCSHWQL 361
Query: 355 EQM 357
QM
Sbjct: 362 TQM 364
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 155 (59.6 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 43/144 (29%), Positives = 76/144 (52%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
++L++A+ + +E+ TV ++T + + W + + L+ L I++D+
Sbjct: 149 NILEEARELALQQEEGKTV-MYTAVGSEWRPFGYP-RRRRPLNSVVLEQGLADRIVRDIR 206
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L
Sbjct: 207 EFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRL 266
Query: 286 QFLLLTMPSRVTLSGLLNFIDGSW 309
LL P + + LL +D ++
Sbjct: 267 NHLLSVAPQQSLV--LLEDVDAAF 288
Score = 135 (52.6 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 38/91 (41%), Positives = 50/91 (54%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TNH ++LDPAL+RPGR+D + Y+G
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLK--EYVGHCSRWQL 361
Query: 355 EQMLIMEMNG-TP--AEAAGELANSAEAQVS 382
QM G P AE+ + A A Q+S
Sbjct: 362 TQMFQRFYPGQAPSLAESFADRALQATTQIS 392
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 152 (58.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 42/144 (29%), Positives = 77/144 (53%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
++L++A+ + +E+ TV ++T + + W + + L+ + + I++D+
Sbjct: 149 NILEEARELALQQEEGKTV-MYTAVGSEWRPFGYP-RRRRPLNSVVLEQGVTERIVRDIR 206
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRL 266
Query: 286 QFLLLTMPSRVTLSGLLNFIDGSW 309
LL P + + LL +D ++
Sbjct: 267 NHLLSVAPQQSLV--LLEDVDAAF 288
Score = 133 (51.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TNH ++LDPAL+RPGR+D + Y+G H
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMK--EYVG---HCSR 358
Query: 355 EQMLIMEMNGTPAEAAGELANSAE 378
Q+ M P +A N A+
Sbjct: 359 WQLTQMFQRFYPGQATSLAENFAD 382
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 151 (58.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 170 HVLKKAK--AVKEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDI 227
++L++A+ A+K++ ++T + W + + L+S + + I+ D+
Sbjct: 149 NILQEARELALKQEEGRTVMYTAMGAEWRPFGFP-RRRRPLSSVVLESGVAERIVDDVKE 207
Query: 228 FRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-LQ 286
F ++Y G ++RGYLL+GPPG GKS+ I ++A L + I + L+D S D L
Sbjct: 208 FIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLN 267
Query: 287 FLLLTMPSRVTLSGLLNFIDGSW 309
LL P + + LL +D ++
Sbjct: 268 HLLSVAPQQSII--LLEDVDAAF 288
Score = 134 (52.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TN E+LDPAL+RPGR+D + Y+G H
Sbjct: 307 RLTFSGLLNALDGVAS--SEARIVFMTTNFIERLDPALVRPGRVDLK--QYVGHCSHWQL 362
Query: 355 EQMLIMEMNGTPAEAAGELANSAE 378
QM P E+A E + +E
Sbjct: 363 TQMF---RRFYPQESAAEADHFSE 383
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 145 (56.1 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 40/109 (36%), Positives = 60/109 (55%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHL 353
+R+T SGLLN +DG S E RI+ TN+ ++LDPAL+RPGR+D + Y+G +
Sbjct: 306 NRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLK--EYIGYCTQYQ 361
Query: 354 YEQML---IMEMNGTPAEAAGELANS---AEAQVSLQGLIKFLHVKLQA 396
E+M + T AE G+ NS + + +QG F+ KL +
Sbjct: 362 LEEMFKNFFASSDTTKAEEFGKRVNSFGRSASPAQIQGF--FMKHKLSS 408
Score = 139 (54.0 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 211 LALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFD 270
+ LD + II D F +Y + G ++RGYLL+GPPG GKS+ I ++A L++
Sbjct: 192 VVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYS 251
Query: 271 IYHLDLTDIQFSSD-LQFLLLTMPSRVTLSGLLNFIDGSW 309
+ L+L++ + D L LL P + + LL ID ++
Sbjct: 252 VCLLNLSERGLTDDRLNHLLNVAPEQSII--LLEDIDAAF 289
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 149 (57.5 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 34/114 (29%), Positives = 65/114 (57%)
Query: 195 WDANNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNG--KEYYRRVGRVWKRGYLLFGPP 252
WD+ +L+ + + D ++KK +I D+ + + +++Y + G ++RGYLL GPP
Sbjct: 242 WDST--ILRPTRPIQTVHFDEQVKKDLIADIINYLDPHTRDFYHQRGIPYRRGYLLHGPP 299
Query: 253 GTGKSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFID 306
GTGK++L ++A+ K ++Y L + + +L+ + +P R + LL ID
Sbjct: 300 GTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDELPPRCII--LLEDID 351
Score = 136 (52.9 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 40/93 (43%), Positives = 55/93 (59%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG-ISHHHL 353
R TLSGLLN +DG S EGRI+ +N +KLDPAL+RPGR+D++ F LG I+
Sbjct: 388 RSTLSGLLNVLDGVASQ--EGRIVFMTSNLADKLDPALVRPGRIDRKIF--LGNINQESA 443
Query: 354 YEQMLIMEMNGTPAEAAGELANSAEAQVS-LQG 385
L M ++ A +L +AE ++S L G
Sbjct: 444 RLMFLRMYAESDDSQFA-DLGPAAEMEMSELSG 475
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 149 (57.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 38/143 (26%), Positives = 75/143 (52%)
Query: 170 HVLKKAK--AVKEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDI 227
++L++A+ A+++ ++T + W + + L+ + + +++D+
Sbjct: 149 NILQEARELALQQQEGRTIMYTAMGTEWRQFGFP-RRRRPLSSVVLEKGVSERLVEDVKE 207
Query: 228 FRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-LQ 286
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L L+D S D L
Sbjct: 208 FIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRLN 267
Query: 287 FLLLTMPSRVTLSGLLNFIDGSW 309
+LL P + + LL +D ++
Sbjct: 268 YLLSVAPQQSII--LLEDVDAAF 288
Score = 128 (50.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 37/91 (40%), Positives = 49/91 (53%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG-ISHHHL 353
R+T SGLLN +DG S E RI+ TN+ ++LDPAL+RPGR+D + Y+G S L
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLK--QYVGHCSRGQL 361
Query: 354 YE--QMLIMEMNGTPAEAAGELANSAEAQVS 382
Q E AE E A + Q+S
Sbjct: 362 ARMFQRFYPEQPPAAAERFAEQALAVSKQIS 392
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 142 (55.0 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 30/106 (28%), Positives = 61/106 (57%)
Query: 163 VLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC--WDANNVVLQHAMTFKDLALDSELKKM 220
++N L ++ + + +D K++++ ++ W+ + Q+ + LD + +
Sbjct: 204 IINSILETAVEYSVTLNKD--KTKIYSLDQSSTFWEC--IACQNKRLVDSVFLDENISEK 259
Query: 221 IIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
++ DL F +GK++Y G ++RGYLL+GPPG+GK++ I SMA +
Sbjct: 260 VVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSFILSMAGN 305
Score = 134 (52.2 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYLGISHHHL 353
+T SGLLN IDG S +GRI++ TNH E+L PAL+RPGR+D + F+Y S+H +
Sbjct: 360 LTFSGLLNAIDGLAS--SDGRILMMTTNHLERLSPALIRPGRIDLKVKFDYA--SNHQI 414
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 142 (55.0 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 38/144 (26%), Positives = 75/144 (52%)
Query: 170 HVLKKAK--AVKEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDI 227
++L++A+ A+++ ++T + W + + L+ + + +++D+
Sbjct: 149 NILQEARELALQQQEGRTIMYTAMGTEWRQFGFP-RRRRPLSSVVLEKGVSERLVEDVKE 207
Query: 228 FRNGKEYYRRVGRV-WKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G+ +RGYLL+GPPG GKS+ I ++A L+ I L L+D S D L
Sbjct: 208 FIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRL 267
Query: 286 QFLLLTMPSRVTLSGLLNFIDGSW 309
+LL P + + LL +D ++
Sbjct: 268 NYLLSVAPQQSII--LLEDVDAAF 289
Score = 128 (50.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 37/91 (40%), Positives = 49/91 (53%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG-ISHHHL 353
R+T SGLLN +DG S E RI+ TN+ ++LDPAL+RPGR+D + Y+G S L
Sbjct: 307 RLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLK--QYVGHCSRGQL 362
Query: 354 YE--QMLIMEMNGTPAEAAGELANSAEAQVS 382
Q E AE E A + Q+S
Sbjct: 363 ARMFQRFYPEQPPAAAERFAEQALAVSKQIS 393
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 142 (55.0 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 176 KAVKEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDL-DIFRNG-KE 233
K K + + + +R+ N + + + + LDS KK ++ D+ + R ++
Sbjct: 183 KLAKSQISVYRAMSNVRDLVRWNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQ 242
Query: 234 YYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSDLQFLLL--T 291
+Y G ++RGYL GPPGTGK++L +++A DIY L L D S FL L
Sbjct: 243 WYANHGIPYRRGYLFSGPPGTGKTSLSSALAGVFGLDIYVLSLLDPNISES-HFLRLFSE 301
Query: 292 MPSRVTLSGLLNFIDGS 308
+P++ + LL ID +
Sbjct: 302 VPTQCVV--LLEDIDAA 316
Score = 130 (50.8 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 293 PSRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYLG-ISH 350
P+ ++LS LLN IDG S EGRI++ TN + LDPAL+RPGR+D F +
Sbjct: 354 PTPISLSALLNAIDGVSSQ--EGRILIMTTNAPQDLDPALIRPGRVDMHIRFELPSRVEF 411
Query: 351 HHLYEQMLIMEMNGTPAEAAGE 372
L+ M +G +E GE
Sbjct: 412 RELFRSMFSDAPSGPDSEVKGE 433
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 140 (54.3 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD 339
V+LSGLLN IDG + C EGRI++ TNH EKLDPAL+RPGR+D
Sbjct: 422 VSLSGLLNVIDGVAA-C-EGRILVMTTNHPEKLDPALVRPGRID 463
Score = 126 (49.4 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 211 LALDSELKKMIIKDLDIFRNGK--EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
+ LD K I D+ + + + +Y G ++RGYLL GPPGTGK++L + A L
Sbjct: 276 VVLDKAQKDAFIDDIKDYLHPRTRRWYNNRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLG 335
Query: 269 FDIYHLDLTDIQFSSD-LQFLLLTMPSRVTLSGLLNFID 306
++Y L+L+ D L L +P+R + LL +D
Sbjct: 336 LELYLLNLSSKSLDEDELMALFTDLPTRCIV--LLEDVD 372
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 138 (53.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 38/140 (27%), Positives = 72/140 (51%)
Query: 170 HVLKKAKAVKEDCNTVK--LHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDI 227
HV +A A+ + K ++ + W A + + + + LK+ I++D+
Sbjct: 198 HVFSEAHALAKSAQAGKTPVYNIQGMSW-AQLGLPRRKRPLASVVFEKGLKEAIVEDVQD 256
Query: 228 FRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-LQ 286
F + ++Y G ++R YLL GPPG+GKS+ I ++A L +++ ++L + + D L
Sbjct: 257 FLSRHQWYADRGIPYRRTYLLHGPPGSGKSSFIHALAGELDYNLAIVNLVERGLTDDKLA 316
Query: 287 FLLLTMPSRVTLSGLLNFID 306
+L+ +P R L LL +D
Sbjct: 317 NMLMRLPPRSIL--LLEDVD 334
Score = 122 (48.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD 339
VT SGLLN +DG + GE RI TN+ E+LDPAL+RPGR+D
Sbjct: 353 VTYSGLLNVLDGMAA--GEDRIAFLTTNYVERLDPALIRPGRVD 394
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 130 (50.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 192 RNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGK--EYYRRVGRVWKRGYLLF 249
R+ W +V + + LD + K ++ D++ + + +Y G +RGYL
Sbjct: 268 RHSW--TSVANRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRRGYLFH 325
Query: 250 GPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSS-DLQFLLLTMPSRVTLSGLLNFID 306
GPPGTGK++L ++A DIY + L + Q S DL L +P R + LL ID
Sbjct: 326 GPPGTGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCLPRRCVV--LLEDID 381
Score = 121 (47.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 296 VTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD-QRAFN 344
++LSGLLN IDG S EGR+++ TN E LD AL+RPGR+D Q AF+
Sbjct: 442 ISLSGLLNAIDGVASH--EGRVLIMTTNRPESLDDALIRPGRVDLQVAFS 489
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 164 (62.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD 339
+V+LSGLL F+DG WS E RII+F TNHKEKLDPA LRPG+MD
Sbjct: 26 QVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMD 70
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 171 (65.3 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 57/208 (27%), Positives = 99/208 (47%)
Query: 31 TEVQDYW--YSSLHFVSQYL-------SSRITIVIKEFLG--LIINQVFEATHLYLGDRT 79
T + +W Y+ +H + +Y+ S+ + I E+ G L ++ F+ H YL ++
Sbjct: 16 TSLMFFWAMYNQVH-IEKYIYKLMGWVSNSVHIKFNEYSGEGLEKSEAFDTIHNYLSTKS 74
Query: 80 TTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLED 139
T + RL+ +S+K K+ +LD +E + DVF+ V +KW + V E N +
Sbjct: 75 T-ALGNRLKANESKKSKSLVLSLDDHETVEDVFQGVKVKWS---SSVR---ENQNQSSTN 127
Query: 140 HNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRN----CW 195
+ +E R+ LSFH +H + + YL HVL++ K + KL+T + W
Sbjct: 128 RDKGF-AERRYLTLSFHSRHREMITTTYLDHVLREGKEIGLKKRERKLYTNNSSHEWISW 186
Query: 196 ----DANNVVLQHAMTFKDLALDSELKK 219
+ +NV H T + A+D E K
Sbjct: 187 RLGTNWSNVSFDHPATLETFAMDPEKNK 214
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 169 (64.5 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 41/100 (41%), Positives = 64/100 (64%)
Query: 213 LDSELKKMIIKDL-DIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDI 271
LDS +K+ I+ D+ D +NGK Y R G ++RGYLL+GPPG+GK++ I ++A L ++I
Sbjct: 230 LDSGIKEGILDDVYDFMKNGKWYSDR-GIPYRRGYLLYGPPGSGKTSFIQALAGELDYNI 288
Query: 272 YHLDLTDIQFSSD-LQFLLLTMPSRVTLSGLLNFIDGSWS 310
L+L++ + D L L+ MP R L LL ID +++
Sbjct: 289 CILNLSENNLTDDRLNHLMNNMPERSIL--LLEDIDAAFN 326
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 40/109 (36%), Positives = 55/109 (50%)
Query: 256 KSNLIASMANHL-----KFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWS 310
++NL NHL + I L+ D F+ Q S VT SGLLN +DG S
Sbjct: 295 ENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQTGEQGFHSSVTFSGLLNALDGVTS 354
Query: 311 WCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQMLI 359
E I TNH EKLD A++RPGR+D + F +G + + E+M +
Sbjct: 355 --SEETITFMTTNHPEKLDAAIMRPGRIDYKVF--VGNATPYQVEKMFM 399
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 146 (56.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 39/124 (31%), Positives = 66/124 (53%)
Query: 170 HVLKKAKAV---KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLD 226
++L++A+ + +E+ TV ++T + + W + + L L I++D+
Sbjct: 29 NILEEARELALQQEEGKTV-MYTAVGSEWRPFGYP-RRRRPLNSVVLQQGLADRIVRDVQ 86
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-L 285
F + ++Y G ++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L
Sbjct: 87 EFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 146
Query: 286 QFLL 289
LL
Sbjct: 147 NHLL 150
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 169 (64.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 39/105 (37%), Positives = 63/105 (60%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
T + LD +K+ I++D+ F + +Y G ++RGYLL+GPPGTGKS+ I ++A
Sbjct: 248 TLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGE 307
Query: 267 LKFDIYHLDLTDIQFSSD-LQFLLLTMPSRVTLSGLLNFIDGSWS 310
L +DI L+L++ + D L LL +P R + LL +D ++S
Sbjct: 308 LDYDIAILNLSERGMTDDRLNRLLTIVPKRTLV--LLEDVDAAFS 350
Score = 119 (46.9 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD 339
+ VT SGLLN +DG S E RI+ TNH E+LD AL+RPGR+D
Sbjct: 364 ANVTFSGLLNALDGVAS--AEERIVFLTTNHVERLDEALVRPGRVD 407
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 68 FEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFED 114
++ T +++ +R S A+ L G+ + T T D+F +
Sbjct: 169 YKNTFIFV-NRMRESKAQELTTGRPWETMTLTTLYSHRHVFEDLFAE 214
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 114 (45.2 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 52/202 (25%), Positives = 100/202 (49%)
Query: 78 RTTTSSAKRLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVE 131
+ T + RL++ K E+ K + D RN+E + ++ + + + P+SV
Sbjct: 50 QVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVG 109
Query: 132 YINPDLEDHNASLRSEV--RHYE--LSF-HKKHTDTVLNLYLPHVLKKAKAVKEDCNTVK 186
+ ++D++A + + V HY LSF K + ++ L H + V D +T
Sbjct: 110 NLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSD-DTDP 168
Query: 187 LHTVLRNCWDANNVVLQHAM--TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWK 243
+ TV++ L+ A T+ D+ LD+++++ I + +++ EYY +G
Sbjct: 169 MVTVMK---------LEKAPQETYADIGGLDTQIQE-IKESVELPLTHPEYYEEMGIKPP 218
Query: 244 RGYLLFGPPGTGKSNLIASMAN 265
+G +L+GPPGTGK+ L ++AN
Sbjct: 219 KGVILYGPPGTGKTLLAKAVAN 240
Score = 91 (37.1 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 307 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 349
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 111 (44.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/145 (28%), Positives = 75/145 (51%)
Query: 127 PLSVEYINPDLEDHNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKED 181
P+SV + ++D++A + + V HY LSF K + ++ L H + V D
Sbjct: 33 PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD 92
Query: 182 CNTVKLHTVLRNCWDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGR 240
+T L TV++ V T+ D+ LD+++++ I + +++ EYY +G
Sbjct: 93 -DTDPLVTVMK-------VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGI 143
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G +L+GPPGTGK+ L ++AN
Sbjct: 144 KPPKGVILYGPPGTGKTLLAKAVAN 168
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 235 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 277
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 57 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 116
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 117 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 173
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 174 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 227
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 228 TGKTLLAKAVAN 239
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 306 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 348
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 58 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 117
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 118 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 174
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 175 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 228
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 229 TGKTLLAKAVAN 240
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 307 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 349
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 176 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 230 TGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 176 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 230 TGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 176 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 230 TGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 176 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 230 TGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 176 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 230 TGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 113 (44.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/192 (26%), Positives = 95/192 (49%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPG
Sbjct: 176 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPG 229
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 230 TGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 111 (44.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 52/194 (26%), Positives = 97/194 (50%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K E+ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAM--TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGP 251
L+ A T+ D+ LD+++++ I + +++ EYY +G +G +L+GP
Sbjct: 176 -------LEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGP 227
Query: 252 PGTGKSNLIASMAN 265
PGTGK+ L ++AN
Sbjct: 228 PGTGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 213 LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIY 272
L L + II D+ F N ++Y G ++R YLL GPPG GKS+LI ++A + F+I
Sbjct: 221 LPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNIC 280
Query: 273 HLDLTDIQFSSDLQF--LLLTMPSRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDP 330
+++ DI + D +F LL T+P + L +L ID + + + I+ + N +
Sbjct: 281 TININDIYLTDD-RFIHLLATIPPKTIL--ILEDID--FIFINDP-IMKYTNNDQNSSSN 334
Query: 331 ALLRPGRMDQRAFNYLGISHHHL 353
+ + G + LG+S+ L
Sbjct: 335 SSIFTGTNNHSTIKTLGVSYSGL 357
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 213 LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIY 272
L L + II D+ F N ++Y G ++R YLL GPPG GKS+LI ++A + F+I
Sbjct: 221 LPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNIC 280
Query: 273 HLDLTDIQFSSDLQF--LLLTMPSRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDP 330
+++ DI + D +F LL T+P + L +L ID + + + I+ + N +
Sbjct: 281 TININDIYLTDD-RFIHLLATIPPKTIL--ILEDID--FIFINDP-IMKYTNNDQNSSSN 334
Query: 331 ALLRPGRMDQRAFNYLGISHHHL 353
+ + G + LG+S+ L
Sbjct: 335 SSIFTGTNNHSTIKTLGVSYSGL 357
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 34/99 (34%), Positives = 61/99 (61%)
Query: 213 LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIY 272
LD + + I+ D+ F E+Y + G ++RGYLL+GPPG+GK++ I ++A L ++I
Sbjct: 217 LDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNIC 276
Query: 273 HLDLTDIQFSSD-LQFLLLTMPSRVTLSGLLNFIDGSWS 310
L+L++ + D L L+ +P+R L LL +D +++
Sbjct: 277 ILNLSENNLTDDRLNHLMNHIPNRSIL--LLEDVDAAFN 313
Score = 124 (48.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 35/80 (43%), Positives = 43/80 (53%)
Query: 263 MANHL-KFDIYHLDLTDIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSWSWCGEGRIILFW 321
+ NH+ I L+ D F+ Q + VT SGLLN +DG S E I
Sbjct: 293 LMNHIPNRSILLLEDVDAAFNKREQTNDQGFNNGVTFSGLLNALDGVAS--AEECITFMT 350
Query: 322 TNHKEKLDPALLRPGRMDQR 341
TNH EKLDPALLRPGR+D +
Sbjct: 351 TNHPEKLDPALLRPGRVDYK 370
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 140 (54.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 36/84 (42%), Positives = 46/84 (54%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLY 354
R+T SGLLN +DG S E RI+ TNH ++LDPAL+RPGR+D + Y+G H
Sbjct: 88 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLK--EYVGYCSHWQL 143
Query: 355 EQMLIMEMNGTPAEAAGELANSAE 378
QM P +A N AE
Sbjct: 144 TQMF---QRFYPGQAPSLAENFAE 164
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 106 (42.4 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 127 PLSVEYINPDLEDHNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKED 181
P+SV + ++D++A + + V HY LSF K + ++ L H + V D
Sbjct: 106 PMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD 165
Query: 182 CNTVKLHTVLRNCWDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGR 240
+T L TV++ V T+ D+ LDS++++ I + +++ EYY +G
Sbjct: 166 -DTDPLVTVMK-------VEKAPQETYADIGGLDSQIQE-IKESVELPLTHPEYYEEMGI 216
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G +L+G PGTGK+ L ++AN
Sbjct: 217 KPPKGVILYGAPGTGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 104 (41.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 49/192 (25%), Positives = 94/192 (48%)
Query: 86 RLRVGKSEKEKTFRTTLD---RNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ K ++ K + + RN+E + E+ + + + P+SV + ++D
Sbjct: 59 RLKLLKQDRIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDD 118
Query: 140 HNASLRSEV--RHYE--LSFHKKHT-DTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++A + + V HY LSF K + ++ L H + V D +T L TV++
Sbjct: 119 NHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMD-DTDPLVTVMK-- 175
Query: 195 WDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPG 253
V T+ D+ LD+++++ I + +++ EYY +G +G +L+G PG
Sbjct: 176 -----VEKAPQETYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGAPG 229
Query: 254 TGKSNLIASMAN 265
TGK+ L ++AN
Sbjct: 230 TGKTLLAKAVAN 241
Score = 91 (37.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 308 TMLELLNQLDGFDSR-GDVKVIMA-TNRIETLDPALIRPGRIDRK 350
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 105 (42.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+A E K+ + + ++ R K++ + G++ K G LL GPPGTGK+ L ++A
Sbjct: 154 VTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPK-GCLLIGPPGTGKTLLAKAIAG 212
Query: 266 HLKFDIYHLDLTD 278
K + + +D
Sbjct: 213 EAKVPFFSISGSD 225
Score = 91 (37.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG + EG II+ TN + LDPALLRPGR D++
Sbjct: 279 TLNQLLVEMDGFEA--NEGVIIIAATNRPDVLDPALLRPGRFDRQ 321
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 125 (49.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 242 WKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDIQFSSD-LQFLLLTMPSRVTLSG 300
++RGYLL+GPPG GKS+ I ++A L+ I L LTD S D L LL P + +
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLV-- 61
Query: 301 LLNFIDGSW 309
LL +D ++
Sbjct: 62 LLEDVDAAF 70
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 98 (39.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
TL+ LL +DG + EG IIL TN K+ LDPALLRPGR D+
Sbjct: 278 TLNQLLVEMDGFEA--NEGVIILAATNRKDVLDPALLRPGRFDR 319
Score = 98 (39.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+A E K+ + + ++ RN +++ R G++ K G LL GPPGTGK+ L ++A
Sbjct: 153 VTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPK-GALLVGPPGTGKTLLARAIAG 211
Query: 266 HLKFDIYHLDLTD 278
+ + +D
Sbjct: 212 EAGVPFFTISGSD 224
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 98 (39.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
TL+ LL +DG + EG IIL TN K+ LDPALLRPGR D+
Sbjct: 278 TLNQLLVEMDGFEA--NEGVIILAATNRKDVLDPALLRPGRFDR 319
Score = 98 (39.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+A E K+ + + ++ RN +++ R G++ K G LL GPPGTGK+ L ++A
Sbjct: 153 VTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPK-GALLVGPPGTGKTLLARAIAG 211
Query: 266 HLKFDIYHLDLTD 278
+ + +D
Sbjct: 212 EAGVPFFTISGSD 224
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 95 (38.5 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + G +II+ TN + LDPAL+RPGR+D++
Sbjct: 260 TLMELLNHLDG-FEELGNVKIIMA-TNRPDVLDPALVRPGRLDRK 302
Score = 91 (37.1 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 235 YRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
Y+RVG +G LL+GPPGTGK+ L +MA+++ + + ++ I
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAI 207
Score = 41 (19.5 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 57 KEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDV 111
KE + L + +V E H R S K+LR+ E K + T D + + V
Sbjct: 4 KESIKLYVKKVIE--H-----REIESKVKKLRLDIKELNKKYEKTEDNLKALQSV 51
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 95 (38.5 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + G +II+ TN + LDPAL+RPGR+D++
Sbjct: 260 TLMELLNHLDG-FEELGNVKIIMA-TNRPDVLDPALVRPGRLDRK 302
Score = 91 (37.1 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 235 YRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
Y+RVG +G LL+GPPGTGK+ L +MA+++ + + ++ I
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAI 207
Score = 41 (19.5 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 57 KEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDV 111
KE + L + +V E H R S K+LR+ E K + T D + + V
Sbjct: 4 KESIKLYVKKVIE--H-----REIESKVKKLRLDIKELNKKYEKTEDNLKALQSV 51
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 101 (40.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG S G+ ++I+ TN + LDPALLRPGR+D++ +G+ + +
Sbjct: 273 TLMELLNQLDGFDS-LGKVKVIMA-TNRPDTLDPALLRPGRLDRKI--EIGLPNEQ--SR 326
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ GE+ A ++S
Sbjct: 327 LEILKIHSNKITKHGEIDFEAVVKLS 352
Score = 89 (36.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
E ++RVG +G LLFGPPGTGK+ L ++A+ L
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 101 (40.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG S G+ ++I+ TN + LDPALLRPGR+D++ +G+ + +
Sbjct: 273 TLMELLNQLDGFDS-LGKVKVIMA-TNRPDTLDPALLRPGRLDRKI--EIGLPNEQ--SR 326
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ GE+ A ++S
Sbjct: 327 LEILKIHSNKITKHGEIDFEAVVKLS 352
Score = 89 (36.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
E ++RVG +G LLFGPPGTGK+ L ++A+ L
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 32/102 (31%), Positives = 57/102 (55%)
Query: 209 KDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
+ + LD + + +++D F + +Y G ++RGYL +GPPGTGKS+ I+++A+H
Sbjct: 209 ESVILDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFG 268
Query: 269 FDIYHLDLTDIQFSSD-LQFLLLTMPSRVTLSGLLNFIDGSW 309
+ + L L++ D L LL T P + +L ID ++
Sbjct: 269 YSVCLLSLSERTLDDDRLNHLLNTAPPNSVV--ILEDIDAAF 308
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
SRVT SGLLN +DG C E R+ TN+ E+LDPAL+RPGR+D++ +
Sbjct: 325 SRVTFSGLLNALDGVA--CAEERLTFMTTNYVERLDPALIRPGRVDRKQY 372
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 100 (40.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 32/89 (35%), Positives = 46/89 (51%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ +L +DG EG I++ TN + LDPALLRPGR D++ +G+ EQ
Sbjct: 278 TLNQMLVEMDGFEG--NEGIIVIAATNRPDVLDPALLRPGRFDRQVV--VGLPDVRGREQ 333
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVSLQG 385
+L + M P LAN E + +G
Sbjct: 334 ILKVHMRKVP------LANDVEPSLIARG 356
Score = 94 (38.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
TF D+A E K+ + + +D R+ + + G++ G L+ GPPGTGK+ L ++A
Sbjct: 154 TFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKI-PTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 267 LKFDIYHLDLTD 278
K + + +D
Sbjct: 213 AKVPFFTISGSD 224
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 100 (40.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 32/89 (35%), Positives = 46/89 (51%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ +L +DG EG I++ TN + LDPALLRPGR D++ +G+ EQ
Sbjct: 278 TLNQMLVEMDGFEG--NEGIIVIAATNRPDVLDPALLRPGRFDRQVV--VGLPDVRGREQ 333
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVSLQG 385
+L + M P LAN E + +G
Sbjct: 334 ILKVHMRKVP------LANDVEPSLIARG 356
Score = 94 (38.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
TF D+A E K+ + + +D R+ + + G++ G L+ GPPGTGK+ L ++A
Sbjct: 154 TFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKI-PTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 267 LKFDIYHLDLTD 278
K + + +D
Sbjct: 213 AKVPFFTISGSD 224
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
+ + L +LK +I+D+ F + +YR G ++RGYLL+G PG GKS+LI ++A
Sbjct: 185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGE 244
Query: 267 LKFDIYHLDLT--DIQFSSDLQFLLLTMPSRVTLSGLLNFIDGSW 309
L DI + L+ DI + LL P + L L+ ID ++
Sbjct: 245 LNLDICIVSLSSKDID-DKQINHLLNNAPPKSIL--LIEDIDAAF 286
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 109 (43.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 206 MTFKDLALDSELKKMIIKDL-DIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+TF D+A E KM +K++ D R+ K++ R G+V K G LL GPPGTGK+ L ++A
Sbjct: 172 VTFDDVA-GMENPKMELKEIVDYLRDPKKFQRIGGKVPK-GVLLVGPPGTGKTLLARAVA 229
Query: 265 NHLKFDIYHLDLTDIQF 281
D+ L ++ QF
Sbjct: 230 GEA--DVTFLSISASQF 244
Score = 82 (33.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
TL+ LL+ +DG S + I++ TN + LDPALLRPGR D+
Sbjct: 297 TLNQLLSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGRFDR 338
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 99 (39.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 203 QHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIAS 262
Q +TF+D+A E K+ + + + ++ K++ + GR+ K G LL GPPGTGK+ L +
Sbjct: 147 QGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPK-GVLLVGPPGTGKTLLARA 205
Query: 263 MANHLKFDIYHLDLTD 278
+A + + +D
Sbjct: 206 VAGEAGVPFFSISGSD 221
Score = 92 (37.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG S EG I++ TN + LDPALLRPGR D++
Sbjct: 275 TLNQLLVEMDGFES--NEGVILIAATNRPDVLDPALLRPGRFDRQ 317
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 108 (43.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + G+ ++I+ TN + LDPALLRPGR+D++ L I + +
Sbjct: 265 TLMELLNQMDG-FDALGQVKMIMA-TNRPDTLDPALLRPGRLDRK----LEIPLPNEVAR 318
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVSLQGL 386
M I++++ P GE+ EA V L L
Sbjct: 319 MDILKIHAEPLNKRGEI--DYEAVVKLSDL 346
Score = 76 (31.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + + + RVG +G LL+GPPGTGK+ L ++A+ +
Sbjct: 153 ELREVI--ELPLLN--PDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQM 200
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ +L +DG EG I++ TN + LDPALLRPGR D++ +G+ EQ
Sbjct: 274 TLNQMLVEMDGFEG--NEGIIVIAATNRPDVLDPALLRPGRFDRQVV--VGLPDVRGREQ 329
Query: 357 MLIMEMNGTP 366
+L + M P
Sbjct: 330 ILKVHMRRVP 339
Score = 94 (38.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
TF D+A E K+ + + ++ R + + G++ K G L+ GPPGTGK+ L ++A
Sbjct: 150 TFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPK-GVLMVGPPGTGKTLLAKAIAGE 208
Query: 267 LKFDIYHLDLTD 278
K + + +D
Sbjct: 209 AKVPFFTISGSD 220
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 104 (41.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + + G+ +II+ TN + LDPALLRPGR+D++
Sbjct: 255 TLMELLNQMDG-FDYLGQTKIIMA-TNRPDTLDPALLRPGRLDRK 297
Score = 79 (32.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + +N E + RVG +G LL+GPPGTGK+ L ++A L
Sbjct: 143 ELREVI--ELPL-KN-PELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASL 190
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+A E+K+ + + ++ +N ++Y R+ K G LLFG PGTGK+ L ++A
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPK-GVLLFGQPGTGKTLLARAIAG 213
Query: 266 HLKFDIYHLDLTD 278
+ + +D
Sbjct: 214 EAGVPFFSISGSD 226
Score = 91 (37.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
TL+ LL +DG S EG II+ TN + LDPALLRPGR D+
Sbjct: 280 TLNQLLVEMDGFNS--NEGIIIIAATNRPDILDPALLRPGRFDR 321
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+A E+K+ + + ++ +N ++Y R+ K G LLFG PGTGK+ L ++A
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPK-GVLLFGQPGTGKTLLARAIAG 213
Query: 266 HLKFDIYHLDLTD 278
+ + +D
Sbjct: 214 EAGVPFFSISGSD 226
Score = 91 (37.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
TL+ LL +DG S EG II+ TN + LDPALLRPGR D+
Sbjct: 280 TLNQLLVEMDGFNS--NEGIIIIAATNRPDILDPALLRPGRFDR 321
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 94 (38.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+A E K+ +I+ +D ++ +++ + G++ K G LL G PGTGK+ L ++A
Sbjct: 155 VTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPK-GCLLIGSPGTGKTLLARAIAG 213
Query: 266 HLKFDIYHLDLTD 278
+ + +D
Sbjct: 214 EANVPFFSISGSD 226
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG S EG +I+ TN + LDPALLRPGR D++
Sbjct: 280 TLNQLLVEMDGFES--NEGVVIIAATNRPDVLDPALLRPGRFDRQ 322
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 94 (38.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+A E K+ +I+ +D ++ +++ + G++ K G LL G PGTGK+ L ++A
Sbjct: 155 VTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPK-GCLLIGSPGTGKTLLARAIAG 213
Query: 266 HLKFDIYHLDLTD 278
+ + +D
Sbjct: 214 EANVPFFSISGSD 226
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG S EG +I+ TN + LDPALLRPGR D++
Sbjct: 280 TLNQLLVEMDGFES--NEGVVIIAATNRPDVLDPALLRPGRFDRQ 322
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 206 MTFKDLALDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+++ D+ +++K I++ +++ E Y+++G RG LL+GPPGTGK+ L ++A
Sbjct: 152 VSYNDIG-GCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA 210
Query: 265 NH 266
NH
Sbjct: 211 NH 212
Score = 82 (33.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 298 LSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 279 LMELLNQMDG-FDQTVNVKVIMA-TNRADTLDPALLRPGRLDRK 320
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 96 (38.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ +L +DG EG I++ TN + LDPALLRPGR D++ +G+ EQ
Sbjct: 276 TLNQMLVEMDGFEG--NEGVIVIAATNRPDVLDPALLRPGRFDRQVT--VGLPDIRGREQ 331
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVSLQG 385
+L + M P L + +A+V +G
Sbjct: 332 ILKVHMRKVP------LGDDVKAEVIARG 354
Score = 91 (37.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
TF D+A E K+ + + +D R + + GR+ G LL G PGTGK+ L ++A
Sbjct: 152 TFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRI-PSGILLVGQPGTGKTLLAKAIAGE 210
Query: 267 LKFDIYHLDLTD 278
K + + +D
Sbjct: 211 AKVPFFTISGSD 222
>TAIR|locus:2115944 [details] [associations]
symbol:AT4G05370 "AT4G05370" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161503
InterPro:IPR025753 Pfam:PF14363 EMBL:BT029322 IPI:IPI00544016
PIR:E85067 RefSeq:NP_192446.1 UniGene:At.51016 PRIDE:Q9M0V8
DNASU:825885 EnsemblPlants:AT4G05370.1 GeneID:825885
KEGG:ath:AT4G05370 TAIR:At4g05370 eggNOG:NOG243159
HOGENOM:HOG000153210 OMA:IIDEFEG PhylomeDB:Q9M0V8
ProtClustDB:CLSN2915942 ArrayExpress:Q9M0V8 Genevestigator:Q9M0V8
Uniprot:Q9M0V8
Length = 149
Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 26/100 (26%), Positives = 51/100 (51%)
Query: 27 DFLPTEVQDYWYSSL-HFVSQYLSSRITIVIKEFLGLIINQVFEATHLYLGDRTTTSSAK 85
+F+P ++D+ S + S YL+S T +I+E ++NQ F A +YL + + +
Sbjct: 35 EFIPVNIRDFIISKFTDYFSFYLNSNFTFIIEEQSDYVMNQTFRAAQVYLPTLLSRITTR 94
Query: 86 RLRVGKSEKEKTF---RTTLDRNEEMVDVFEDVTLKWKLI 122
L V S+ + + + +++D FE + L+W L+
Sbjct: 95 SLLVSSSDLKNPMAKPKFGIPVKAKIIDEFEGIRLEWTLL 134
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 95 (38.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 206 MTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+T+ D+ LD + K+ I + +++ + Y+++G RG LL+GPPGTGK+ L+ ++A
Sbjct: 163 VTYADVGGLDMQ-KQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVA 221
Query: 265 N 265
N
Sbjct: 222 N 222
Score = 86 (35.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 288 RILLE-LLNQMDG-FEQTSNVKVIMA-TNRADTLDPALLRPGRLDRK 331
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 96 (38.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + + G+ +II+ TN + LDPALLR GR+D++
Sbjct: 260 TLMELLNQLDG-FDYLGKTKIIMA-TNRPDTLDPALLRAGRLDRK 302
Score = 84 (34.6 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
EL+++I +L + +N E ++RVG +G LL+GPPGTGK+ L ++A+ ++
Sbjct: 148 ELREVI--ELPL-KN-PELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSME 196
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 91 (37.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 248 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 301
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 302 LDILKIHAGPITKHGEIDYEAIVKLS 327
Score = 89 (36.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 136 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 183
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 91 (37.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 309
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLS 335
Score = 89 (36.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 144 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 91 (37.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 309
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLS 335
Score = 89 (36.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 144 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 91 (37.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 309
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLS 335
Score = 89 (36.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 144 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 91 (37.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 309
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLS 335
Score = 89 (36.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 144 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 91 (37.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 309
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLS 335
Score = 89 (36.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 144 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 91 (37.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 309
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLS 335
Score = 89 (36.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 144 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 91 (37.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 262 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 315
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 316 LDILKIHAGPITKHGEIDYEAIVKLS 341
Score = 89 (36.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 150 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 197
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 93 (37.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG S G+ +II+ TN + LDPAL+RPGR+D++
Sbjct: 306 TLLELLNQLDGFESR-GDVKIIMA-TNRIDSLDPALIRPGRIDRK 348
Score = 88 (36.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 207 TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
TF D+ +S+++++ + +++ EYY +G +G +L+G PGTGK+ L ++AN
Sbjct: 181 TFDDIGGCESQIQELK-ESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVAN 239
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 91 (37.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 270 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 323
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLS 349
Score = 89 (36.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 158 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 91 (37.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 270 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 323
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLS 349
Score = 89 (36.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 158 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 91 (37.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 270 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIDLPNEQA--R 323
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P GE+ A ++S
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLS 349
Score = 89 (36.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E ++RVG + +G LL+GPPGTGK+ L ++A+ L
Sbjct: 158 ELREVI--ELPL--TNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 102 (41.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
F D+A E K+ I++ + +N K +Y R+G RG +L GPPGTGK+ L + A
Sbjct: 295 FADVAGVDEAKEEIMEFVKFLKNPK-FYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 268 KFDIYHLDLTDIQFSSDLQFLLLTMPSRV 296
++ L ++ +F L+ + PSRV
Sbjct: 354 --NVPFLSVSGSEF---LEMFVGVGPSRV 377
Score = 84 (34.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG S E ++ TN + LDPALLRPGR D++
Sbjct: 419 TLNQLLVEMDGFTS--SEHIVVFAGTNRPDVLDPALLRPGRFDRQ 461
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 96 (38.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG S G+ ++I+ TN + LDPALLRPGR+D++
Sbjct: 264 TLMELLNQMDGFDS-LGQVKMIMA-TNRPDSLDPALLRPGRLDRK 306
Score = 83 (34.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
EL+++I +L + E + RVG +G LL+GPPGTGK+ L ++A+ L
Sbjct: 152 ELREVI--ELPLLN--PELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQL 199
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 96 (38.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 203 QHAMTFKDLALDSELKKMIIKDLDIFRN-GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIA 261
Q +TF D+A E K+ + + ++ R+ GK ++R+G G LL GPPGTGK+ L
Sbjct: 150 QVKVTFDDVAGVDEAKEEVKELVEFLRDPGK--FQRLGGKMPCGVLLVGPPGTGKTLLAK 207
Query: 262 SMANHLKFDIYHLDLTD 278
++A K + + +D
Sbjct: 208 AVAGEAKVPFFTISGSD 224
Score = 88 (36.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ LL +DG EG I++ TN + LDPALLRPGR D++ + + E
Sbjct: 278 TLNQLLVEMDGFEG--KEGIIVMAATNRPDVLDPALLRPGRFDRQVV--VPLPDIKGREY 333
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVSLQG 385
+L + MN P LA +A V +G
Sbjct: 334 ILKVHMNKLP------LAKDVKASVIARG 356
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 92 (37.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LL +DG + G+ +II+ TN + LDPALLRPGR+D++
Sbjct: 304 TLMELLTQMDG-FDNLGQTKIIMA-TNRPDTLDPALLRPGRLDRK 346
Score = 88 (36.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 172 LKKAKAVKEDCNTVKLHTVLRNCWD--ANNVVL--QHAMTFKDLALDSELKKMIIKDLDI 227
LKK V D T+ + +L D N+ Q +TF + +E + + + +++
Sbjct: 140 LKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIEL 199
Query: 228 FRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
E ++RVG +G LL+GPPGTGK+ L ++A
Sbjct: 200 PLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVA 236
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 96 (38.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
TF D+A E K+ + + +D R+ ++ + GR+ G L+ GPPGTGK+ L ++A
Sbjct: 155 TFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRI-PTGVLMVGPPGTGKTLLAKAIAGE 213
Query: 267 LKFDIYHLDLTD 278
K + + +D
Sbjct: 214 SKVPFFTISGSD 225
Score = 88 (36.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ +L +DG EG I++ TN + LD ALLRPGR D++ +G+ EQ
Sbjct: 279 TLNQMLVEMDGFEG--NEGIIVIAATNRPDVLDSALLRPGRFDRQVV--VGLPDVRGREQ 334
Query: 357 MLIMEMNGTP 366
+L + M P
Sbjct: 335 ILKVHMRKVP 344
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 100 (40.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF D+ E K + + +D ++ ++Y R GR+ K G LL GPPGTGK+ L ++A
Sbjct: 245 VTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPK-GVLLVGPPGTGKTLLARAIAG 303
Query: 266 HLKFDIYH 273
+ +H
Sbjct: 304 EAQVPFFH 311
Score = 84 (34.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T++ LL+ +DG EG I++ TN + LD ALLRPGR D R
Sbjct: 368 TINQLLSEMDGFTR--NEGIIVIAATNRVDDLDKALLRPGRFDVR 410
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 99 (39.9 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y ++ K+G +L GPPGTGK+ L + A
Sbjct: 98 FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATA 154
Score = 83 (34.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
TL+ LL +DG + +IL TN + LDPALLRPGR D++ F
Sbjct: 222 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIF 266
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 93 (37.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 206 MTFKDLALDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+T+ D+ +++K IK+ +++ + Y ++G RG LL+GPPGTGK+ L+ ++A
Sbjct: 152 VTYADVG-GLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVA 210
Query: 265 N 265
N
Sbjct: 211 N 211
Score = 85 (35.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 277 RILLE-LLNQMDG-FDQTSTVKVIMA-TNRADTLDPALLRPGRLDRK 320
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 93 (37.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 206 MTFKDLALDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+T+ D+ +++K IK+ +++ + Y ++G RG LL+GPPGTGK+ L+ ++A
Sbjct: 152 VTYADVG-GLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVA 210
Query: 265 N 265
N
Sbjct: 211 N 211
Score = 85 (35.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 277 RILLE-LLNQMDG-FDQTSTVKVIMA-TNRADTLDPALLRPGRLDRK 320
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 96 (38.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 203 QHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIAS 262
++ +TF D+A E K+ +I+ +D ++ + + + G++ K G LL G PGTGK+ L +
Sbjct: 150 RNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPK-GCLLIGSPGTGKTLLARA 208
Query: 263 MANHLKFDIYHLDLTD 278
+A + + +D
Sbjct: 209 IAGEANVPFFSISGSD 224
Score = 86 (35.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG S EG II+ TN + LD ALLRPGR D++
Sbjct: 278 TLNQLLVEMDGFES--NEGVIIIAATNRPDVLDSALLRPGRFDRQ 320
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 96 (38.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 203 QHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIAS 262
++ +TF D+A E K+ +I+ +D ++ + + + G++ K G LL G PGTGK+ L +
Sbjct: 150 RNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPK-GCLLIGSPGTGKTLLARA 208
Query: 263 MANHLKFDIYHLDLTD 278
+A + + +D
Sbjct: 209 IAGEANVPFFSISGSD 224
Score = 86 (35.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG S EG II+ TN + LD ALLRPGR D++
Sbjct: 278 TLNQLLVEMDGFES--NEGVIIIAATNRPDVLDSALLRPGRFDRQ 320
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 98 (39.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
TFKD+A E K+ I++ + ++ Y +++G +G +L GPPGTGK+ L + A
Sbjct: 352 TFKDVAGMDEAKEEIMEFVSFLKDPSRY-KKLGARIPKGAILSGPPGTGKTLLAKATAGE 410
Query: 267 LKFDIYHLDLTDIQFSSDLQFLLLTMPSRV 296
+ Y + +D ++ + PSRV
Sbjct: 411 AGVNFYTISGSDF-----IEMFVGVGPSRV 435
Score = 87 (35.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
TL+ LL +DG S G ++ TN + LDPALLRPGR D++ +
Sbjct: 475 TLNQLLVEMDGFSSTSGV--VVFAGTNRSDVLDPALLRPGRFDRQIY 519
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 94 (38.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ LL +DG G I++ TN + LDPALLRPGR D++ + +S+ L +
Sbjct: 285 TLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLRPGRFDRQ----IPVSNPDLAGR 338
Query: 357 MLIMEMN--GTPAEAAGELANSAEAQVSLQG 385
++ ++ G P A +L A+ V + G
Sbjct: 339 RAVLRVHSKGKPMAADADLDGLAKRTVGMTG 369
Score = 90 (36.7 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 207 TFKDLA-LDSELKKMI-IKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
TF D+A +D ++++ IKD F Y+ +G +G LL+GPPGTGK+ L ++A
Sbjct: 161 TFADVAGVDEAVEELYEIKD---FLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 265 NHLKFDIYHLDLTD 278
+ + +D
Sbjct: 218 GEAGVPFFTISGSD 231
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 90 (36.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 19/63 (30%), Positives = 40/63 (63%)
Query: 205 AMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
++++ ++ SE + + + +++ E ++RVG + +G LL+GPPGTGK+ L ++A
Sbjct: 129 SVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 265 NHL 267
+ L
Sbjct: 189 SQL 191
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL LLN +DG + ++I+ TN + LDPALLRPGR+D++ ++ + + +
Sbjct: 256 TLMELLNQMDG-FDTLHRVKMIMA-TNRPDTLDPALLRPGRLDRKI--HIELPNEQA--R 309
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVS 382
+ I++++ P G++ A ++S
Sbjct: 310 LDILKIHSGPITKHGDIDYEAIVKLS 335
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 211 LALDSELKKMIIKDLDIFRNGKE--YYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
+ LD E K ++ D++ + K +Y G +RGYL GPPGTGK++L ++A
Sbjct: 272 VVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGTGKTSLSFALAGVFG 331
Query: 269 FDIYHLDLTDIQFSS-DLQFLLLTMPSRVTLSGLLNFIDGSWSWCGEGRI 317
+IY + L + Q S DL L +P R + LL ID + EG I
Sbjct: 332 LEIYVISLIEPQLSDEDLSTLFNGLPRRCIV--LLEDIDTAGMSRAEGEI 379
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 112 (44.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 173 KKAKAVKEDCNTV--KLHTVLRNCWDANNVVLQ-HAMTFKDLALDSELKKMIIKDLDIFR 229
K K KED V ++ VL+ A + LQ ++ F+D+ + K + K L R
Sbjct: 225 KGGKKKKEDLQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGNDTTLKEVCKMLVHMR 284
Query: 230 NGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
+ E Y +G + RG LL GPPG GK+ L ++A L I + T+I
Sbjct: 285 H-PEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEI 333
Score = 71 (30.1 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQRAF 343
I+ TN + +DPA+LRPGR+D+ F
Sbjct: 719 IMAATNRPDIIDPAILRPGRLDKTLF 744
Score = 65 (27.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 292 MPSRVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISH 350
M R+ ++ LL +D + R+++ TN + LDPAL R GR D+ LGI
Sbjct: 379 MERRI-VAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREIC--LGIPD 435
Query: 351 HHLYEQML 358
E++L
Sbjct: 436 EASRERIL 443
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 112 (44.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 207 TFKDLALDSELKKMIIKDL-DIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
TF D+ + +E K ++DL D RN ++YYRR V +G LL GPPGTGK+ L S+A
Sbjct: 162 TFADV-MGAEEAKGELQDLVDFLRNPEKYYRR-NIVMPKGILLVGPPGTGKTLLAKSLAG 219
Query: 266 HLK 268
+
Sbjct: 220 EAR 222
Score = 69 (29.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 293 PSRVTLSGLLNFIDGSWSWCG-EGRIILFWTNHKEKLDPALLRPGRMDQ 340
PS L+ LL +DG + G EG +++ TN+++ LD AL+R GR D+
Sbjct: 280 PSEA-LNQLLVELDG---FDGREGVMVMAATNYQDSLDTALIRSGRFDR 324
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 90 (36.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++++ TN E LDPAL+RPGR+D++
Sbjct: 311 TMLELLNQLDGFDSR-GDVKVLMA-TNRIESLDPALIRPGRIDRK 353
Score = 87 (35.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 48/195 (24%), Positives = 96/195 (49%)
Query: 86 RLRVGKSEKEKTF---RTTLDRNEEMVDVFEDVTLKWKLICTQV---PLSVEYINPDLED 139
RL++ KSE+ K + +N+E + E+ + + ++ P++V + ++D
Sbjct: 62 RLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDD 121
Query: 140 HNASLRSEV--RHYE--LSF-HKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
+A + + V HY +SF K+ + ++ L H V D +T + +V++
Sbjct: 122 QHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSD-DTDPMVSVMK-- 178
Query: 195 WDANNVVLQHAM--TFKDLA-LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFG 250
L+ A T+ D+ LD ++++ IK+ +++ EYY +G +G +L+G
Sbjct: 179 -------LEKAPQETYADVGGLDQQIQE--IKEAVELPLTHPEYYEEMGIRPPKGVILYG 229
Query: 251 PPGTGKSNLIASMAN 265
PGTGK+ L ++AN
Sbjct: 230 CPGTGKTLLAKAVAN 244
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 95 (38.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + G+ ++I+ TN + LDPALLRPGR+D++
Sbjct: 262 TLMELLNQLDG-FDQLGKVKMIMA-TNRPDVLDPALLRPGRLDRK 304
Score = 80 (33.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
E + RVG +G LL+GPPGTGK+ L ++A+++
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 197
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 92 (37.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG +S EG II+ TN + LDPALLRPGR D++
Sbjct: 283 TLNQLLVEMDG-FS-ANEGIIIIAATNRADILDPALLRPGRFDRQ 325
Score = 88 (36.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
FKD+A E K+ +++ ++ ++ +++ R+ K G LL GPPGTGK+ L + A
Sbjct: 160 FKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPK-GVLLVGPPGTGKTLLAKACAGEA 218
Query: 268 KFDIYHLDLTD 278
+ + +D
Sbjct: 219 GVPFFSISGSD 229
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 94 (38.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + G+ ++I+ TN + LDPALLRPGR+D++
Sbjct: 263 TLMELLNQLDG-FDELGKVKMIMA-TNRPDVLDPALLRPGRLDRK 305
Score = 80 (33.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
E + RVG +G LL+GPPGTGK+ L ++A+++
Sbjct: 164 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 198
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 91 (37.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + + +II+ TN + LDPALLRPGR+D++
Sbjct: 260 TLMELLNQMDG-FDTLSKVKIIMA-TNRPDVLDPALLRPGRLDRK 302
Score = 83 (34.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
E + RVG +G LL+GPPGTGK+ L ++A++L+
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLE 196
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 89 (36.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYLGISHHHL 353
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++ F L
Sbjct: 260 RILLE-LLNQMDG-FDKSTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPLPDRKQKRL 316
Query: 354 YEQMLIMEMN 363
Q +I +MN
Sbjct: 317 IFQTIISKMN 326
Score = 85 (35.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 216 ELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+++K +K+ +++ E Y ++G G L++GPPGTGK+ L+ ++AN
Sbjct: 144 DMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 89 (36.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYLGISHHHL 353
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++ F L
Sbjct: 260 RILLE-LLNQMDG-FDKSTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPLPDRKQKRL 316
Query: 354 YEQMLIMEMN 363
Q +I +MN
Sbjct: 317 IFQTIISKMN 326
Score = 85 (35.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 216 ELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+++K +K+ +++ E Y ++G G L++GPPGTGK+ L+ ++AN
Sbjct: 144 DMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 91 (37.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG + EG II+ TN + LDPALLRPGR D++
Sbjct: 284 TLNQLLVEMDGFGA--NEGIIIIAATNRPDILDPALLRPGRFDRQ 326
Score = 88 (36.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
F+D+A E K+ +++ ++ ++ +++ VG +G LL GPPGTGK+ L ++A
Sbjct: 161 FRDVAGADEEKQELVEVVEFLKDPRKF-AEVGARIPKGVLLVGPPGTGKTLLARAVAGEA 219
Query: 268 KFDIYHLDLTD 278
+ + +D
Sbjct: 220 GVPFFSISGSD 230
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIA 261
+TF D+A E+K + + +D +N K+Y + G +G L+ GPPG GK+ LIA
Sbjct: 149 ITFNDVAGVDEVKMELSELVDFLQNPKKY-KEFGVKMPKGVLMVGPPGVGKT-LIA 202
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 30/89 (33%), Positives = 43/89 (48%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ LL +DG G I++ TN E +DPALLR GR D+R F +S ++
Sbjct: 271 TLNQLLTQMDGFED--NSGVIVIAATNKIELMDPALLRSGRFDRRIF----LSLPDFKDR 324
Query: 357 MLIMEMNGTPAEAAGELANSAEAQVSLQG 385
+ I+E+ L A+A V G
Sbjct: 325 LKILEIYMKDKNNNINLNKIAKASVGFSG 353
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 93 (37.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + G+ ++I+ TN + LDPALLRPGR+D++
Sbjct: 262 TLMELLNQLDG-FDNLGKVKMIMA-TNRPDVLDPALLRPGRLDRK 304
Score = 80 (33.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
E + RVG +G LL+GPPGTGK+ L ++A+++
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 197
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 98 (39.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+D+ E K+ + K++ F E + +G +G LL GPPGTGK+ L ++A
Sbjct: 297 VTFEDVKGCDEAKQEL-KEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAG 355
Query: 266 HLKFDIYH 273
K +H
Sbjct: 356 EAKVPFFH 363
Score = 81 (33.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMD 339
T++ LL+ +DG G I+L TN ++ LD ALLRPGR D
Sbjct: 420 TINQLLSEMDGFHQ--NAGVIVLGATNRRDDLDQALLRPGRFD 460
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 91 (37.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 172 LKKAKAVKEDC---NTVKLHTVLRNCWDANNVVLQHAMTFKDLALD--SELKKMI--IKD 224
+K KA + C ++ LH VL N D V L D D L K I IK+
Sbjct: 104 VKDLKASQRVCLRSDSYMLHKVLENKADPL-VSLMMVEKVPDSTYDMVGGLTKQIKEIKE 162
Query: 225 -LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
+++ E + +G +G +L+GPPGTGK+ L ++A+H
Sbjct: 163 VIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205
Score = 82 (33.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + +II+ TN + LDPALLRPGR+D++
Sbjct: 271 TMLELLNQLDG-FETSKNIKIIMA-TNRLDILDPALLRPGRIDRK 313
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 177 AVKEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALD--SELKKMI--IKD-LDIFRNG 231
A+K + T LH +L N D V L D D L K I IK+ +++
Sbjct: 111 ALKHESYT--LHRILPNKIDPL-VSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKH 167
Query: 232 KEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 168 PELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 202
Score = 83 (34.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S + +L TN + LDPALLRPGR+D++
Sbjct: 269 TMLELLNQLDGFEST--KNIKVLMCTNRIDILDPALLRPGRIDRK 311
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 110 (43.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 202 LQHAM-TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNL 259
+QH +F+D+ +DS LK++ ++ I E+Y ++G + RG LL GPPG GK+ L
Sbjct: 243 VQHPTESFRDIGGMDSTLKELC--EMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFL 300
Query: 260 IASMANHLKFDIYHLDLTDI 279
+++ LK + + T++
Sbjct: 301 ARAISGQLKMPLMEIPATEL 320
Score = 73 (30.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 314 EGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQML-IMEMNGT-PAEA-- 369
+G IL TN + +DPA+LRPGR+D Y+G ++L NG P A
Sbjct: 799 KGVYILAATNRPDIIDPAILRPGRLD--TILYVGFPEQSERTEILKATTKNGKRPVLADD 856
Query: 370 --AGELANSAEAQVS--LQGLIK 388
E+A E L GL+K
Sbjct: 857 VDLDEIAAQTEGYTGADLAGLVK 879
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 276 LTDIQFSSDLQFLLLTMPSRVTLSG 300
L +++ L+ L LT PS V L G
Sbjct: 679 LAPVKYPEMLERLGLTAPSGVLLCG 703
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 90 (36.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 206 MTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+++ D+ LD + K+ I + +++ + Y+++G RG LLFGPPG GK+ L ++A
Sbjct: 149 ISYSDIGGLDIQ-KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVA 207
Query: 265 NH 266
+H
Sbjct: 208 HH 209
Score = 82 (33.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 274 RILLE-LLNQMDG-FDETTNIKVIMA-TNRADTLDPALLRPGRLDRK 317
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 87 (35.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 235 YRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
Y+++G RG LL+GPPGTGK+ L ++A+H
Sbjct: 176 YKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207
Score = 85 (35.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 298 LSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRA-FNYLGISHHHLYEQ 356
L LLN +DG + ++I+ TN ++ LDPALLRPGR+D++ F L Q
Sbjct: 274 LMELLNQMDG-FDVSVNVKVIMA-TNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQ 331
Query: 357 MLIMEMN 363
++ +MN
Sbjct: 332 VITSKMN 338
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 91 (37.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ IK+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 137 LDQQIKE--IKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 189
Score = 80 (33.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + +II+ TN + LDPALLRPGR+D++
Sbjct: 255 TMLELLNQLDG-FEPTKNIKIIMA-TNRLDILDPALLRPGRIDRK 297
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 89 (36.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 203 QHAMTFKDLALDSELKKMIIKDLDIFRN-GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIA 261
Q + FKD+A SE K I + +D +N G+ + ++G RG LL GPPG GK+ L
Sbjct: 279 QLKIKFKDVAGCSEAKVEIREFVDYLKNPGR--FTKLGAKLPRGALLTGPPGCGKTLLAK 336
Query: 262 SMA 264
++A
Sbjct: 337 ALA 339
Score = 89 (36.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 29/81 (35%), Positives = 43/81 (53%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG--ISHHHLY 354
TL+ LL +DG S G G ++L TN + LD ALLRPGR D+ L + ++
Sbjct: 413 TLNQLLVEMDGMGS--GNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMF 470
Query: 355 E-QMLIMEMNGTPAEAAGELA 374
E M ++++ P E + LA
Sbjct: 471 ELYMRKIKLDHAPQEYSQRLA 491
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 89 (36.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 305 TMLELLNQLDG-FDDRGDVKVIMA-TNKIETLDPALIRPGRIDRK 347
Score = 83 (34.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 45/198 (22%), Positives = 91/198 (45%)
Query: 79 TTTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVTLKWKLICTQV---PLSVEYINP 135
+T K LR+ + + N E++ FE + K ++ PLS+ +
Sbjct: 52 STRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEE 111
Query: 136 DLEDHNASLRSEVR-HYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNC 194
++D +A + S Y +S +L+ +L+ +V T+ + VL++
Sbjct: 112 IIDDDHAIVTSPTMPDYYVS--------ILSFVDKELLEPGCSVLLHHKTMSIVGVLQD- 162
Query: 195 WDANNVVLQHAM------TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYL 247
DA+ +V M ++ D+ L+S++++ I + +++ E Y +G +G +
Sbjct: 163 -DADPMVSVMKMDKSPTESYSDIGGLESQIQE-IKESVELPLTHPELYEEMGIKPPKGVI 220
Query: 248 LFGPPGTGKSNLIASMAN 265
L+G PGTGK+ L ++AN
Sbjct: 221 LYGAPGTGKTLLAKAVAN 238
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 87 (35.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ IK+ +++ E + +G +G +L+GPPGTGK+ L ++A+H
Sbjct: 149 LDKQIKE--IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 201
Score = 84 (34.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S + +II+ TN + LDPALLRPGR+D++
Sbjct: 267 TMLELLNQLDGFES-SKDIKIIMA-TNRLDILDPALLRPGRIDRK 309
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 89 (36.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN + LDPAL+RPGR+D++
Sbjct: 316 TMLELLNQLDGFDSR-GDVKVIMA-TNRIDSLDPALIRPGRIDRK 358
Score = 83 (34.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 207 TFKDLA-LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
++ D+ L+S++++ IK+ +++ E Y +G +G +L+GPPGTGK+ L ++A
Sbjct: 191 SYADIGGLESQIQE--IKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 248
Query: 265 N 265
N
Sbjct: 249 N 249
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 89 (36.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++I+ TN + LDPAL+RPGR+D++
Sbjct: 316 TMLELLNQLDGFDSR-GDVKVIMA-TNRIDSLDPALIRPGRIDRK 358
Score = 83 (34.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 207 TFKDLA-LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
++ D+ L+S++++ IK+ +++ E Y +G +G +L+GPPGTGK+ L ++A
Sbjct: 191 SYADIGGLESQIQE--IKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 248
Query: 265 N 265
N
Sbjct: 249 N 249
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 95 (38.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 206 MTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+T+ D+ LD + K+ I + +++ + Y ++G RG LL+GPPGTGK+ L+ ++A
Sbjct: 169 VTYADVGGLDMQ-KQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVA 227
Query: 265 NHLK 268
N K
Sbjct: 228 NSTK 231
Score = 76 (31.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQR 341
++ TN + LDPALLRPGR+D++
Sbjct: 314 VIMATNRADTLDPALLRPGRLDRK 337
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 92 (37.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL LLN +DG + G+ +II+ TN + LDPALLR GR+D++
Sbjct: 295 TLMELLNQMDG-FDTLGQTKIIMA-TNRPDTLDPALLRAGRLDRK 337
Score = 79 (32.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 216 ELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
EL+++I +L + +N E + RVG +G LL+GPPGTGK+ L ++A
Sbjct: 183 ELREVI--ELPL-KN-PELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 93 (37.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 21/61 (34%), Positives = 40/61 (65%)
Query: 206 MTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+++ D+ LD + K+ + + +++ + YR++G RG LL+GPPGTGK+ L+ ++A
Sbjct: 131 VSYADVGGLDVQ-KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVA 189
Query: 265 N 265
N
Sbjct: 190 N 190
Score = 76 (31.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQR 341
++ TN + LDPALLRPGR+D++
Sbjct: 276 VIMATNRADTLDPALLRPGRLDRK 299
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 90 (36.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ IK+ +++ E + +G +G LLFGPPGTGK+ L ++A+H
Sbjct: 164 LDKQIKE--IKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHH 216
Score = 79 (32.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 282 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDPALLRPGRIDRK 324
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 86 (35.3 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHL 274
E Y+++G RG L++GPPG GK+ L ++A+H+ H+
Sbjct: 138 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHV 179
Score = 73 (30.8 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG I+ TN K+ LDP LLRPG +D +
Sbjct: 236 RILLE-LLNQMDGFDQNISVKAIMA--TNRKDTLDPTLLRPGHLDHK 279
Score = 45 (20.9 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 14/69 (20%), Positives = 30/69 (43%)
Query: 153 LSFHKKHTDTVLNLYLPHVLKKAKAVKEDC--NTV-----KLHTVLRNCWDANNVVLQHA 205
++ HK H++T++N+ P + D N + + + W+A + L H
Sbjct: 79 VALHK-HSNTLVNVLPPEAESSIMMLTSDQKPNVIYADIGSMDIQKQEVWEAMELPLTHF 137
Query: 206 MTFKDLALD 214
+K + +D
Sbjct: 138 ELYKQIGID 146
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 105 (42.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 173 KKAKAVKE--DCNTVKLHTVLRNCWDANNVVLQH-AMTFKDLALDSELKKMIIKDLDIFR 229
K+AK KE D + +L+ + L H ++ F+D+ + E K I K L R
Sbjct: 221 KRAKRKKEFPDVDEEIESILLKGKVKSKGPELYHPSVKFEDVGGNDETLKEICKMLIHVR 280
Query: 230 NGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
+ E Y +G V RG+LL GPPG GK+ L ++A L+ + + T++
Sbjct: 281 H-PEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEM 329
Score = 70 (29.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQRAFNYLGI 348
I+ TN + +DPA+LRPGR+D+ Y+G+
Sbjct: 720 IMAATNRPDIIDPAILRPGRLDKTL--YVGL 748
Score = 63 (27.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 292 MPSRVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISH 350
M R+ ++ LL +D + ++++ TN + LDPAL R GR D+ LGI
Sbjct: 375 MERRI-VAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREIC--LGIPD 431
Query: 351 HHLYEQML 358
E++L
Sbjct: 432 EAAREKIL 439
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 96 (38.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++IL TN E LDPALLRPGR+D++
Sbjct: 311 TMLELLNQLDGFDSR-GDVKVILA-TNRIESLDPALLRPGRIDRK 353
Score = 72 (30.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 207 TFKDLA-LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
++ D+ L++++++ IK+ +++ E Y +G +G +L+G PGTGK+ L ++A
Sbjct: 186 SYADIGGLEAQIQE--IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVA 243
Query: 265 N 265
N
Sbjct: 244 N 244
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 96 (38.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S G+ ++IL TN E LDPALLRPGR+D++
Sbjct: 311 TMLELLNQLDGFDSR-GDVKVILA-TNRIESLDPALLRPGRIDRK 353
Score = 72 (30.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 207 TFKDLA-LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
++ D+ L++++++ IK+ +++ E Y +G +G +L+G PGTGK+ L ++A
Sbjct: 186 SYADIGGLEAQIQE--IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVA 243
Query: 265 N 265
N
Sbjct: 244 N 244
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 84 (34.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 282 RILLE-LLNQMDG-FDQTTNVKVIMA-TNRADTLDPALLRPGRLDRK 325
Score = 84 (34.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 18/62 (29%), Positives = 39/62 (62%)
Query: 206 MTFKDLALDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+++ D+ +++K I++ +++ E Y+++G RG L++GPPG GK+ L ++A
Sbjct: 157 VSYADIG-GMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 215
Query: 265 NH 266
+H
Sbjct: 216 HH 217
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 91 (37.1 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 307 FKDVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Score = 83 (34.3 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
TL+ LL +DG + +IL TN + LDPALLRPGR D++ F
Sbjct: 430 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIF 474
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 95 (38.5 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
F+D+A SE K+ + + +D ++ E Y+R+G RG LL GPPG GK+ L ++A
Sbjct: 340 FRDVAGLSEAKQEVKEFVDYLKS-PEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVA 395
Score = 79 (32.9 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
S TL+ LL +DG + EG ++L TN + LD ALLRPGR D+
Sbjct: 463 SEQTLNQLLVEMDGMAT--KEGVLMLASTNRADILDKALLRPGRFDR 507
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 91 (37.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 306 FKDVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLAKATA 361
Score = 83 (34.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
TL+ LL +DG + +IL TN + LDPALLRPGR D++ F
Sbjct: 429 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIF 473
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 91 (37.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 306 FKDVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLAKATA 361
Score = 83 (34.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
TL+ LL +DG + +IL TN + LDPALLRPGR D++ F
Sbjct: 429 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIF 473
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 173 KKAKAVKEDCNTV--KLHTVLRNCWDANNVVLQHA-MTFKDLALDSELKKMIIKDLDIFR 229
K +K KED V ++ VL+ A + Q + + F+D+ + K + K L R
Sbjct: 109 KGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMR 168
Query: 230 NGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
+ E Y +G V RG LL GPPG GK+ L ++A L I + +I
Sbjct: 169 H-PEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEI 217
Score = 71 (30.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQRAF 343
I+ TN + +DPA+LRPGR+D+ F
Sbjct: 603 IMAATNRPDIIDPAILRPGRLDKTLF 628
Score = 65 (27.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 292 MPSRVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISH 350
M R+ ++ LL +D + R+++ TN + LDPAL R GR D+ LGI
Sbjct: 263 MERRI-VAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREIC--LGIPD 319
Query: 351 HHLYEQML 358
E++L
Sbjct: 320 EASRERIL 327
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 96 (38.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 110 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 165
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E++ +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 166 HPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201
Score = 71 (30.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 266 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 308
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 99 (39.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 207 TFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
++ ++ LD +K+ +I D F + Y ++ WKRG + +GPPG GK+ I + N
Sbjct: 191 SWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMNM 250
Query: 267 L 267
L
Sbjct: 251 L 251
Score = 68 (29.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 299 SGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALL-RPGRMDQR 341
S LN +DG + +G ++ TNH E+LDP + RP R D++
Sbjct: 306 SYFLNEVDGLKN--NDGIFMIGSTNHLERLDPGISKRPSRFDRK 347
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 87 (35.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ IK+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 153 LDKQIKE--IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205
Score = 79 (32.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 271 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDPALLRPGRIDRK 313
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 84 (34.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 47/182 (25%), Positives = 84/182 (46%)
Query: 95 EKTFRTTLDRNEEMVDVFEDVTLKWKLI--CTQVPLSVEYINPDLEDHNASLRSEV--RH 150
E+ F D N+ VD K+I PL+V + ++D++A + S V H
Sbjct: 71 EQEFLQNYDLNQPKVDENSKEQADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEH 130
Query: 151 YE--LSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNTVKLHTVLRNCWD--ANNVVLQHAM 206
Y +SF K LYL V + T+ + V+ D N + ++ A
Sbjct: 131 YVRIMSFVDKS-----KLYL------GATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAP 179
Query: 207 T--FKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASM 263
T + D+ L++++++M + +++ E Y +G +G +L+G PGTGK+ L ++
Sbjct: 180 TESYSDIGGLEAQVQEMK-EAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAV 238
Query: 264 AN 265
AN
Sbjct: 239 AN 240
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + + ++I+ TN E LDPAL+RPGR+D++
Sbjct: 307 TMLELLNQLDG-FDARTDVKVIMA-TNRIETLDPALIRPGRIDRK 349
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 88 (36.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 194 CWDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPP 252
C ++ Q +T+ + L+S+LK I + +++ E ++ G RG LL+GPP
Sbjct: 338 CTNSKEQDSQFKVTYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPP 396
Query: 253 GTGKSNLIASMANHL 267
GTGK+ + ++AN +
Sbjct: 397 GTGKTMIARAVANEV 411
Score = 85 (35.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQ 340
RV S LL +DG S EGR+++ TN + LD AL RPGR D+
Sbjct: 472 RVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDK 517
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 94 (38.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 183 NTVKLHTVLRNCWDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRV 241
N +K+HT N + +N Q +T+ + L S+LK I + +++ E ++ G
Sbjct: 333 NFIKVHT---NSEEEDN---QFKVTYDMIGGLSSQLKA-IREIIELPLKQPELFKSYGIP 385
Query: 242 WKRGYLLFGPPGTGKSNLIASMANHL 267
RG LL+GPPGTGK+ + ++AN +
Sbjct: 386 PPRGVLLYGPPGTGKTMIARAVANEV 411
Score = 79 (32.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQ 340
RV S LL +DG S EG++++ TN LD AL RPGR D+
Sbjct: 472 RVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDK 517
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 94 (38.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
FKD+A E K+ I++ + +N K+Y +G +G LL GPPGTGK+ L + A
Sbjct: 321 FKDVAGCDEAKQEIMEFVHFLKNPKKY-EDLGAKIPKGALLVGPPGTGKTLLAKATAG-- 377
Query: 268 KFDIYHLDLTDIQFSSDLQFLLLTMPSRV 296
+ + L ++ F ++ + PSRV
Sbjct: 378 ESGVPFLSISGSDF---MEMFVGVGPSRV 403
Score = 78 (32.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG + G ++L TN + LD ALLRPGR D++
Sbjct: 444 TLNQLLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPGRFDRQ 486
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 91 (37.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 308 FKDVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLAKATA 363
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
TL+ LL +DG + +IL TN + LDPAL+RPGR D++ F
Sbjct: 431 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQIF 475
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 101 (40.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 173 KKAKAVKEDCNTV--KLHTVLRNCWDANNVVLQHA-MTFKDLALDSELKKMIIKDLDIFR 229
K +K KED V ++ VL+ A + Q + + F+D+ + K + K L R
Sbjct: 226 KGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMR 285
Query: 230 NGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
+ E Y +G V RG LL GPPG GK+ L ++A L I + +I
Sbjct: 286 H-PEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEI 334
Score = 71 (30.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQRAF 343
I+ TN + +DPA+LRPGR+D+ F
Sbjct: 720 IMAATNRPDIIDPAILRPGRLDKTLF 745
Score = 65 (27.9 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 292 MPSRVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISH 350
M R+ ++ LL +D + R+++ TN + LDPAL R GR D+ LGI
Sbjct: 380 MERRI-VAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREIC--LGIPD 436
Query: 351 HHLYEQML 358
E++L
Sbjct: 437 EASRERIL 444
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 91 (37.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 308 FKDVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLAKATA 363
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
TL+ LL +DG + +IL TN + LDPAL+RPGR D++ F
Sbjct: 431 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQIF 475
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 194 CWDANNVVLQHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPP 252
C ++ Q +T+ + L+S+LK I + +++ E ++ G RG LL+GPP
Sbjct: 338 CTNSKEQDSQFKVTYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPP 396
Query: 253 GTGKSNLIASMANHL 267
GTGK+ + ++AN +
Sbjct: 397 GTGKTMIARAVANEV 411
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQ 340
RV S LL +DG S EGR+++ TN + LD AL RPGR D+
Sbjct: 472 RVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDK 517
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 309 TMLELLNQLDG-FDDRGDIKVIMA-TNKIESLDPALIRPGRIDRK 351
Score = 77 (32.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 207 TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
++ D+ L+S++++ I + +++ E Y +G +G +L+G PGTGK+ L ++AN
Sbjct: 184 SYADIGGLESQIQE-IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 115 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 170
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 272 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 314
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 115 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 170
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 272 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 314
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 115 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 170
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 272 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 314
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 115 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 170
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 272 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 314
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 115 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 170
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 272 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 314
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 115 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 170
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 272 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 314
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 115 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 170
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 272 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 314
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 90 (36.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y +G +G +L GPPGTGK+ L + A
Sbjct: 151 FKDVAGCEEAKLEIMEFVNFLKNPKQY-EDLGAKIPKGAILTGPPGTGKTLLAKATA 206
Score = 79 (32.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG 347
TL+ LL +DG + +IL TN + LDPAL+RPGR D++ Y+G
Sbjct: 274 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQI--YIG 320
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 93 (37.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 121 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 176
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 177 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 212
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 278 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 320
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 93 (37.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 123 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 178
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 179 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 280 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 322
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 93 (37.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 177 AVKEDCNTVKLHTVLRNCWD--ANNVVLQHA--MTFKDLA-LDSELKKMIIKD-LDIFRN 230
A++ D T LH +L N D + ++++ T++ + LD ++K+ IK+ +++
Sbjct: 123 ALRNDSYT--LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE--IKEVIELPVK 178
Query: 231 GKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 179 HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 280 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 322
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 100 (40.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 173 KKAKAVKEDCNTVKLHTVLRNCWDANNVVLQHA-MTFKDLALDSELKKMIIKDLDIFRNG 231
K+ K V+E ++ VL A + LQ + + F+D+ + K + K L R+
Sbjct: 224 KRKKDVQEADGEIE--GVLHKKAKAKGLELQVSRVKFEDVGGNDATLKEVCKMLIHMRH- 280
Query: 232 KEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
E Y +G V RG LL GPPG GK+ L ++A L I + T++
Sbjct: 281 PEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEV 328
Score = 71 (30.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQRAF 343
I+ TN + +DPA+LRPGR+D+ F
Sbjct: 714 IMAATNRPDIIDPAILRPGRLDKTLF 739
Score = 66 (28.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 292 MPSRVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISH 350
M R+ ++ LL +D + R+++ TN + LDPAL R GR D+ LGI
Sbjct: 374 MERRI-VAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREIC--LGIPD 430
Query: 351 HHLYEQML 358
E++L
Sbjct: 431 EASRERIL 438
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 100 (40.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 173 KKAKAVKEDCNTVKLHTVLRNCWDANNVVLQHA-MTFKDLALDSELKKMIIKDLDIFRNG 231
K+ K V+E ++ VL A + LQ + + F+D+ + K + K L R+
Sbjct: 224 KRKKDVQEADGEIE--GVLHKKAKAKGLELQVSRVKFEDVGGNDATLKEVCKMLIHMRH- 280
Query: 232 KEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
E Y +G V RG LL GPPG GK+ L ++A L I + T++
Sbjct: 281 PEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEV 328
Score = 71 (30.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQRAF 343
I+ TN + +DPA+LRPGR+D+ F
Sbjct: 719 IMAATNRPDIIDPAILRPGRLDKTLF 744
Score = 66 (28.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 292 MPSRVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISH 350
M R+ ++ LL +D + R+++ TN + LDPAL R GR D+ LGI
Sbjct: 374 MERRI-VAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREIC--LGIPD 430
Query: 351 HHLYEQML 358
E++L
Sbjct: 431 EASRERIL 438
>UNIPROTKB|G3V4X1 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AL161662
HGNC:HGNC:9547 EMBL:AL355074 ProteinModelPortal:G3V4X1 SMR:G3V4X1
Ensembl:ENST00000553835 ArrayExpress:G3V4X1 Bgee:G3V4X1
Uniprot:G3V4X1
Length = 84
Score = 98 (39.6 bits), Expect = 0.00022, P = 0.00022
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 207 TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
T+ D+ LD+++++ I + +++ EYY +G +G +L+GPPGTGK+ L ++AN
Sbjct: 20 TYADIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 78
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E Y+++G RG L++GPPG GK+ L ++A+H
Sbjct: 188 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 221
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 286 RILLE-LLNQMDG-FDQNVNVKVIMA-TNRADTLDPALLRPGRLDRK 329
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E Y+++G RG L++GPPG GK+ L ++A+H
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 287 RILLE-LLNQMDG-FDQNVNVKVIMA-TNRADTLDPALLRPGRLDRK 330
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E Y+++G RG L++GPPG GK+ L ++A+H
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 287 RILLE-LLNQMDG-FDQNVNVKVIMA-TNRADTLDPALLRPGRLDRK 330
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E Y+++G RG L++GPPG GK+ L ++A+H
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 287 RILLE-LLNQMDG-FDQNVNVKVIMA-TNRADTLDPALLRPGRLDRK 330
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E Y+++G RG L++GPPG GK+ L ++A+H
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 287 RILLE-LLNQMDG-FDQNVNVKVIMA-TNRADTLDPALLRPGRLDRK 330
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E Y+++G RG L++GPPG GK+ L ++A+H
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 287 RILLE-LLNQMDG-FDQNVNVKVIMA-TNRADTLDPALLRPGRLDRK 330
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
E Y+++G RG L++GPPG GK+ L ++A+H
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 287 RILLE-LLNQMDG-FDQNVNVKVIMA-TNRADTLDPALLRPGRLDRK 330
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 91 (37.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 302 FKDVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLAKATA 357
Score = 79 (32.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG 347
TL+ LL +DG + ++L TN + LDPAL+RPGR D++ Y+G
Sbjct: 425 TLNQLLVEMDGFNT--ATNVVVLAGTNRPDILDPALMRPGRFDRQI--YIG 471
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 92 (37.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K+ I++ + +N K+Y +G +G LL GPPGTGK+ L + A
Sbjct: 326 FKDVAGCEEAKQEIMEFVHFLQNPKKY-EDLGAKIPKGALLVGPPGTGKTLLAKATA 381
Score = 78 (32.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG + G ++L TN + LD ALLRPGR D++
Sbjct: 450 TLNQLLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPGRFDRQ 492
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 101 (40.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 173 KKAKAVKEDCNTV--KLHTVLRNCWDANNVVLQHA-MTFKDLALDSELKKMIIKDLDIFR 229
K +K KED V ++ VL+ A + Q + + F+D+ + K + K L R
Sbjct: 120 KGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMR 179
Query: 230 NGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
+ E Y +G V RG LL GPPG GK+ L ++A L I + +I
Sbjct: 180 H-PEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEI 228
Score = 65 (27.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 292 MPSRVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISH 350
M R+ ++ LL +D + R+++ TN + LDPAL R GR D+ LGI
Sbjct: 274 MERRI-VAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREIC--LGIPD 330
Query: 351 HHLYEQML 358
E++L
Sbjct: 331 EASRERIL 338
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 87 (35.7 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
F D+A E K I++ ++ +N K+Y + +G +G LL GPPGTGK+ L + A
Sbjct: 302 FADVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGALLTGPPGTGKTLLAKATA 357
Score = 82 (33.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG 347
TL+ LL +DG S ++L TN + LDPAL+RPGR D++ Y+G
Sbjct: 425 TLNQLLVEMDGFNSTTNV--VVLAGTNRPDVLDPALMRPGRFDRQI--YIG 471
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 42 HFVSQYLS----SRITIVIKEFLGLI 63
HFV YL+ R+ +V K+F+ +I
Sbjct: 172 HFVQYYLARGLVDRLEVVNKQFVRVI 197
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 89 (36.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ IK+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 166 LDQQIKE--IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Score = 74 (31.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + +I +L TN + LD ALLRPGR+D++
Sbjct: 285 TMLELLNQLDG---FEASNKIKVLMATNRIDILDQALLRPGRIDRK 327
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 89 (36.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ IK+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 166 LDQQIKE--IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Score = 74 (31.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + +I +L TN + LD ALLRPGR+D++
Sbjct: 285 TMLELLNQLDG---FEASNKIKVLMATNRIDILDQALLRPGRIDRK 327
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 93 (37.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 297 TLSGLLNFIDGSWSWCGEGRII-LFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYE 355
TL+ LL +DG + G G +I + TN + LDPAL+RPGR D++ F I L
Sbjct: 532 TLNQLLVSLDG---FEGRGEVITIASTNRPDILDPALVRPGRFDRKIF----IPKPGLIG 584
Query: 356 QMLIMEMNGTPAEAAGELANSAEAQVSLQGLI 387
+M I++++ A +L A A ++ G++
Sbjct: 585 RMEILQVHARKKPMAEDLDYMAVASMT-DGMV 615
Score = 77 (32.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
F D+A +++ + + + F +G E YRR G G LL GPPG GK+ L ++A
Sbjct: 409 FTDVAGLGKIRLELEEIVKFFTHG-EMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEA 467
Query: 268 KFDIYHL 274
+ + +
Sbjct: 468 GVNFFSI 474
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 84 (34.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 25/70 (35%), Positives = 34/70 (48%)
Query: 317 IILFWTNHKEKLDPALLRPGRMDQRA-FNYLGISHHHLYEQMLIMEMNGTPAEAAGELAN 375
I++ TN + LDPALLRPGR D+R + I+ E +L + G P L N
Sbjct: 299 IVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGR---EAILKIHAKGKPLADTVNLEN 355
Query: 376 SAEAQVSLQG 385
A+ V G
Sbjct: 356 LAKQTVGFSG 365
Score = 83 (34.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+TF ++A E K+ + + ++ F +E ++ +G +G LL GPPGTGK+ L ++A
Sbjct: 156 ITFANVAGVDEAKQEVGEVVE-FLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIA 213
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 90 (36.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
FKD+A E K I++ ++ +N K+Y +G +G +L GPPGTGK+ L + A
Sbjct: 307 FKDVAGCEEAKLEIMEFVNFLKNPKQY-EDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Score = 79 (32.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG 347
TL+ LL +DG + +IL TN + LDPAL+RPGR D++ Y+G
Sbjct: 430 TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQI--YIG 476
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 89 (36.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+TF D+A E K+ + + ++ RN ++Y R +G RG LL G PGTGK+ L ++A
Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVR-LGARPPRGVLLVGLPGTGKTLLAKAVA 379
Score = 80 (33.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 271 IYHLDLTD-IQFSSDLQFLLLTMPSRV-TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKL 328
I +D D + S D +F + + R TL+ LL +DG S I+L TN + L
Sbjct: 420 IIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDS--NSAVIVLGATNRADVL 477
Query: 329 DPALLRPGRMDQ 340
DPAL RPGR D+
Sbjct: 478 DPALRRPGRFDR 489
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 83 (34.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
L+ ++K+ IK+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 150 LEKQIKE--IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202
Score = 79 (32.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LDPALLRPGR+D++
Sbjct: 269 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDPALLRPGRIDRK 311
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 92 (37.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 291 TMPSRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF 343
T S V L+ LLN IDG +G +I+ TN ++DPALLRPGR+D+ +
Sbjct: 615 TAASNV-LTSLLNEIDGVEEL--KGVVIVGATNKPTEIDPALLRPGRLDRHIY 664
Score = 76 (31.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 202 LQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIA 261
L +T+ + S+ +++ +++ N + G RG LL GPPGTGK+ L+
Sbjct: 222 LPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLR 281
Query: 262 SMANHL 267
+AN +
Sbjct: 282 CVANSI 287
Score = 74 (31.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+ D+ ELK+ +I+ + + + ++ +G +G LL+GPPG K+ ++A
Sbjct: 498 WSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALA 554
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 88 (36.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 50/222 (22%), Positives = 98/222 (44%)
Query: 57 KEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRTTLDRNEEMVDVFEDVT 116
+E L + ++ + T L L ++ LRV + + + + + N E + V + T
Sbjct: 26 EEVLKMSTEEIIQRTRL-LDSEIKIMKSEVLRV--THELQAMKDKIKENSEKIKV--NKT 80
Query: 117 LKWKLICTQVPLSVEYINPDLEDH-NASLRSEVRH----YELSFHKKHTDTVLNLYLPHV 171
L + L+ + L + N ED N L S+ + + S + + V+ L
Sbjct: 81 LPY-LVSNVIELLDVHPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEK 139
Query: 172 LKKAKAVKEDCNTVKLHTVLRNCWD----ANNVVLQHAMTFKDLA-LDSELKKMIIKDLD 226
LK V + ++ + L +D A V + + D+ LD ++++++ + +
Sbjct: 140 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV-EAIV 198
Query: 227 IFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
+ N KE + +G +G L++GPPGTGK+ L + A K
Sbjct: 199 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 240
Score = 74 (31.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + + ++I TN + LDPALLR GR+DQ+
Sbjct: 304 TMLELLNQLDG-FQPNTQVKVIAA-TNRVDILDPALLRSGRLDQK 346
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 86 (35.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
R+TL+ LL +DG EG +++ TN + LD AL+RPGR+D+
Sbjct: 371 RMTLNQLLVELDGFEQ--NEGIVVICATNFPQSLDKALVRPGRLDK 414
Score = 81 (33.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIA 261
+TF D+ E+K+ + + +D +N ++ ++G +G LL G PGTGK+ LIA
Sbjct: 251 VTFADVKGCDEVKQELEEIIDYLKNSDKF-TKIGAKLPKGILLSGEPGTGKT-LIA 304
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 86 (35.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
R+TL+ LL +DG EG +++ TN + LD AL+RPGR+D+
Sbjct: 371 RMTLNQLLVELDGFEQ--NEGIVVICATNFPQSLDKALVRPGRLDK 414
Score = 81 (33.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIA 261
+TF D+ E+K+ + + +D +N ++ ++G +G LL G PGTGK+ LIA
Sbjct: 251 VTFADVKGCDEVKQELEEIIDYLKNSDKF-TKIGAKLPKGILLSGEPGTGKT-LIA 304
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 85 (35.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 405 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 450
Score = 82 (33.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K + + ++ RN +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 285 VTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPK-GILLVGPPGTGKTLLARAVAG 343
Query: 266 HLKFDIYH 273
Y+
Sbjct: 344 EADVPFYY 351
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 98 (39.6 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 298 LSGLLNFIDGSWSW--CGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYE 355
+S LL +DG S G G ++ TN + LD ALLRPGR D+ YLG+S H +
Sbjct: 1118 VSQLLAELDGMSSGDDSGGGVFVIGATNRPDLLDQALLRPGRFDKLL--YLGVSDTH-EK 1174
Query: 356 QMLIME 361
Q+ IME
Sbjct: 1175 QLTIME 1180
Score = 77 (32.2 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 179 KEDCNTVKLHTVLRNCWDANNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRV 238
K D +T + +N DA ++T+ D+ +K +++ + + E + +
Sbjct: 967 KGDLDTA-VEAARKNFADAIGAPKIPSVTWDDVGGLGNVKDAVMETIQLPLERPELFAK- 1024
Query: 239 GRVWKRGYLLFGPPGTGKSNLIASMANHLKFDIY 272
G + G L +GPPGTGK+ L ++A + +
Sbjct: 1025 GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFF 1058
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 355 EQMLIMEMNGTPAEAAGELANSAEAQVSLQG 385
E +L P+ +AGELA+ + + +G
Sbjct: 1266 EDLLAAHEEMIPSVSAGELAHYERVRATFEG 1296
Score = 37 (18.1 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 121 LICTQVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKH 159
L+ + LS++ + L+ L + H E FH++H
Sbjct: 131 LVLDALALSLDTVFVSLD---GELAKRLEHGEGVFHREH 166
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 95 (38.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 186 KLHTVLRNCWDANNVVLQ-HAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKR 244
++ +L+ A + LQ ++ F+D+ + K + K L R+ E Y+ +G V R
Sbjct: 240 EIEAILQKRAKAKSTELQISSVKFEDVGGNDATLKEVCKMLIHMRH-PEVYQHLGVVPPR 298
Query: 245 GYLLFGPPGTGKSNLIASMANHLKFDIYHLDLTDI 279
G LL GPPG GK+ L ++A L I + +I
Sbjct: 299 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEI 333
Score = 73 (30.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 318 ILFWTNHKEKLDPALLRPGRMDQRAF 343
IL TN + +DPA+LRPGR+D+ F
Sbjct: 719 ILAATNRPDIIDPAILRPGRLDKTLF 744
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 85 (35.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 271 IYHLDLTD-IQFSSDLQFLLLTMPSRV-TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKL 328
I +D D + S D +F +++ R TL+ LL +DG S I+L TN + L
Sbjct: 424 IIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDS--SSAVIVLGATNRADVL 481
Query: 329 DPALLRPGRMDQ 340
DPAL RPGR D+
Sbjct: 482 DPALRRPGRFDR 493
Score = 83 (34.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+TF D+A E K+ + + ++ +N Y R +G RG LL G PGTGK+ L ++A
Sbjct: 326 ITFADVAGVDEAKEELEEIVEFLKNPDRYVR-LGARPPRGVLLVGLPGTGKTLLAKAVA 383
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 89 (36.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + G+ ++I+ TN E LDPAL+RPGR+D++
Sbjct: 327 TMLELLNQLDG-FDDRGDVKVIMA-TNKIETLDPALIRPGRIDRK 369
Score = 73 (30.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 17/60 (28%), Positives = 37/60 (61%)
Query: 207 TFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
++ D+ L+S++++ + + +++ E Y +G +G +L+G PGTGK+ L ++AN
Sbjct: 202 SYADIGGLESQIQE-VRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 260
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 86 (35.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
R+ L LLN +DG + ++I+ TN ++ LDPALLRPGR+D++
Sbjct: 283 RILLE-LLNQMDG-FDQSTNVKVIMA-TNRQDTLDPALLRPGRLDRK 326
Score = 75 (31.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 206 MTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
+++ D+ LD + K+ + + +++ E Y+++G RG L++GPPG GK+ L ++A
Sbjct: 158 ISYGDIGGLDMQ-KQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVA 216
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 87 (35.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 172 LKKAKAVKEDCNTVKLHTV--------LRNCWDANNVVLQHAMTFKDLA-LDSELKKMII 222
L K+ +V CNT + + + C + + Q +T+ + L+S+LK+ I
Sbjct: 302 LLKSPSVGAKCNTDTFYFISSTTRVNFTKVCTKSKDQDNQLKVTYDMIGGLNSQLKE-IR 360
Query: 223 KDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
+ +++ E ++ G RG LL+GPPGTGK+ + ++AN +
Sbjct: 361 EIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEV 405
Score = 80 (33.2 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 32/90 (35%), Positives = 43/90 (47%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISHHHL 353
RV S LL +DG S EG++++ TN LD AL RPGR D+ + + L
Sbjct: 466 RVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRL 524
Query: 354 -YEQMLIMEMNGTPAEAAG-ELANSAEAQV 381
Q L+ + EA +LANSA V
Sbjct: 525 DILQKLLRRVPHLLTEAELLQLANSAHGYV 554
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 86 (35.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 201 VLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLI 260
V + +TF D+A + K + + +D +N + Y +G +G LL GPPGTGK+ L
Sbjct: 242 VPETGVTFGDVAGADQAKLELQEVVDFLKN-PDKYTALGAKIPKGCLLVGPPGTGKTLLA 300
Query: 261 ASMA 264
++A
Sbjct: 301 RAVA 304
Score = 80 (33.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T++ LL +DG +S G I+L TN + LD ALLRPGR D++
Sbjct: 372 TINQLLTEMDG-FSG-NSGVIVLAATNRPDVLDSALLRPGRFDRQ 414
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 96 (38.9 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
FKD+A +E K+ +++ + +N E Y ++G RG +L GPPGTGK+ L + A
Sbjct: 372 FKDVAGMAEAKQEVMEFVKFLQN-PEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 268 KFDIY 272
Y
Sbjct: 431 GVPFY 435
Score = 67 (28.6 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
TL+ LL +DG + + ++L TN + LD AL+RPGR D+
Sbjct: 496 TLNQLLVEMDGFDT--SDHVVVLAGTNRPDILDRALMRPGRFDR 537
Score = 44 (20.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 14/53 (26%), Positives = 20/53 (37%)
Query: 57 KEFLGLIINQVFEATHLYLGDRTTTSSAKRLRVGKSEKEKTFRT--TLDRNEE 107
KE L +++ + +Y L K E +K F T LD EE
Sbjct: 42 KELAELTTDEILQTVRIYYELSNQHLYLDELEFNKPEVQKLFETYNKLDNTEE 94
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 89 (36.4 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
F D+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 271 FADVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 329
Query: 268 K 268
K
Sbjct: 330 K 330
Score = 76 (31.8 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLG 347
TL+ +L +DG S ++L TN + LDPAL RPGR D++ Y+G
Sbjct: 394 TLNQMLVEMDGFNSTTNV--VVLAGTNRPDILDPALTRPGRFDRQI--YIG 440
Score = 41 (19.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 42 HFVSQYLS----SRITIVIKEFLGLI 63
HFV YL+ R+ +V K+F+ +I
Sbjct: 141 HFVQYYLARGLVDRLEVVNKQFVRVI 166
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 86 (35.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 161 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 203
Score = 70 (29.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 244 RGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 73 KGVLLFGPPGTGKTLCARAVAN 94
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 92 (37.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 322 TNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQMLIMEMNGTPAEAAGELANSAEAQV 381
TN +++DPA+LRPGR+DQ Y+ + + +L ++ TP E EL A+A
Sbjct: 633 TNRPDQIDPAILRPGRLDQLI--YVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQ 690
Query: 382 SLQG 385
G
Sbjct: 691 GFSG 694
Score = 75 (31.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 233 EYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+ ++ +G RG L++GPPGTGK+ + ++AN
Sbjct: 238 QLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Score = 73 (30.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+T+ D+ E+K+ + + ++ + Y + G +G L +GPPGTGK+ L ++A
Sbjct: 484 VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT 543
Query: 266 HL 267
+
Sbjct: 544 EV 545
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 86 (35.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 289 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 331
Score = 74 (31.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 85 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 137
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 138 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 197
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 198 EPPKGVLLFGPPGTGKTLCARAVAN 222
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
L+S+LK+ I + +++ E ++ G RG LL+GPPGTGK+ + ++AN +
Sbjct: 349 LNSQLKE-IREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEV 402
Score = 80 (33.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 32/90 (35%), Positives = 43/90 (47%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISHHHL 353
RV S LL +DG S EG++++ TN LD AL RPGR D+ + + L
Sbjct: 463 RVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRL 521
Query: 354 -YEQMLIMEMNGTPAEAAG-ELANSAEAQV 381
Q L+ + EA +LANSA V
Sbjct: 522 DILQKLLRRVPHLLTEAELLQLANSAHGYV 551
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 297 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 339
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 93 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 145
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 146 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 205
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 206 EPPKGVLLFGPPGTGKTLCARAVAN 230
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 85 (35.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 398 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 443
Score = 80 (33.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K+ + + ++ +N +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPK-GILLVGPPGTGKTLLARAVAG 336
Query: 266 HLKFDIYH 273
Y+
Sbjct: 337 EADVPFYY 344
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 74 (31.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 94 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 87 (35.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 48/192 (25%), Positives = 86/192 (44%)
Query: 81 TSSAKRLRVGKSEKEKTF-RTTLDRNEEMVDVFEDVTLKWKLICTQVPLSVEYINPDLED 139
T L+ +E++K R RNE + V + + +L+ Q E + P D
Sbjct: 19 TQKISELQFTVNERQKNLLRLQAQRNELNLKV-RLLREELQLLQEQGSYIAEVVKP--MD 75
Query: 140 HNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAK-AVKEDCNTVKLHTVLRNCWDAN 198
N L V+ + + D +N+ V ++ A++ + T LH +L N D
Sbjct: 76 KNKVL---VKVHPEGKYVVDVDKTINI--KDVTPSSRVALRNESYT--LHKILPNKVDPL 128
Query: 199 -NVVLQHAMTFKDLALDSELKKMI--IKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGT 254
+++L + + L K I IK+ +++ E + +G +G LL+GPPGT
Sbjct: 129 VSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGT 188
Query: 255 GKSNLIASMANH 266
GK+ L ++A+H
Sbjct: 189 GKTLLARAVAHH 200
Score = 72 (30.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 265 TMLELLNQLDG-FEATKNIKVIMA-TNRIDVLDQALLRPGRIDRK 307
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 85 (35.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ +K+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 184 LDQQVKE--VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHH 236
Score = 75 (31.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S + ++ TN + LD ALLRPGR+D++
Sbjct: 301 TMMELLNQLDGFEST--QNIKVIMCTNRIDILDEALLRPGRIDRK 343
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 85 (35.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD ++K+ +K+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 184 LDQQVKE--VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHH 236
Score = 75 (31.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG S + ++ TN + LD ALLRPGR+D++
Sbjct: 301 TMMELLNQLDGFEST--QNIKVIMCTNRIDILDEALLRPGRIDRK 343
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 87 (35.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 214 DSELKKM-IIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHLK 268
DS +K M +++ + + N KE + +G +G L++GPPGTGK+ L + A K
Sbjct: 134 DSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 189
Score = 68 (29.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQ 340
T+ LLN +DG + + ++I TN + LDPALLR GR+D+
Sbjct: 253 TMLELLNQLDG-FQPNTQVKVIAA-TNRVDILDPALLRSGRLDR 294
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 85 (35.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 398 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 443
Score = 80 (33.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K+ + + ++ +N +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPK-GILLVGPPGTGKTLLARAVAG 336
Query: 266 HLKFDIYH 273
Y+
Sbjct: 337 EADVPFYY 344
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 85 (35.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 398 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 443
Score = 80 (33.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K+ + + ++ +N +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPK-GILLVGPPGTGKTLLARAVAG 336
Query: 266 HLKFDIYH 273
Y+
Sbjct: 337 EADVPFYY 344
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 85 (35.0 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 398 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 443
Score = 80 (33.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K+ + + ++ +N +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPK-GILLVGPPGTGKTLLARAVAG 336
Query: 266 HLKFDIYH 273
Y+
Sbjct: 337 EADVPFYY 344
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 85 (35.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 203 QHAMTFKDLA-LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIA 261
Q +T+ + L S+LK I + +++ E ++ G RG LL+GPPGTGK+ +
Sbjct: 347 QFKVTYDMIGGLSSQLKA-IREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIAR 405
Query: 262 SMANHL 267
++AN +
Sbjct: 406 AVANEV 411
Score = 82 (33.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 32/90 (35%), Positives = 43/90 (47%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISHHHL 353
RV S LL +DG S EG++++ TN LD AL RPGR D+ + + L
Sbjct: 472 RVVAS-LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRL 530
Query: 354 -YEQMLIMEMNGTPAEAAG-ELANSAEAQV 381
Q L+ + EA +LANSA V
Sbjct: 531 DILQKLLRRVPHLLTEAELLQLANSAHGYV 560
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 85 (35.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 432 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 477
Score = 80 (33.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K+ + + ++ +N +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 312 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPK-GILLVGPPGTGKTLLARAVAG 370
Query: 266 HLKFDIYH 273
Y+
Sbjct: 371 EADVPFYY 378
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 88 (36.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 213 LDSELKKMIIKD-LDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANH 266
LD+++K+ IK+ +++ E + +G +G LL+GPPGTGK+ L ++A+H
Sbjct: 180 LDTQIKE--IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 232
Score = 71 (30.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
T+ LLN +DG + ++I+ TN + LD ALLRPGR+D++
Sbjct: 298 TMLELLNQLDG-FEATKNIKVIMA-TNRIDILDSALLRPGRIDRK 340
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 85 (35.0 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 451 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 496
Score = 80 (33.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K+ + + ++ +N +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 331 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPK-GILLVGPPGTGKTLLARAVAG 389
Query: 266 HLKFDIYH 273
Y+
Sbjct: 390 EADVPFYY 397
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 83 (34.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAF-------NYL 346
++ TL+ LL +DG +S EG II+ TN E LD AL RPGR D+ +
Sbjct: 341 AKQTLNQLLVELDG-FSQT-EGIIIIGATNFPESLDKALTRPGRFDKEVIVDLPDVRGRI 398
Query: 347 GISHHHLYEQMLIMEMN------GTPAEAAGELAN 375
I HH+ +++ GTP + EL N
Sbjct: 399 DILKHHMQNVETADDVDPSIIARGTPGLSGAELMN 433
Score = 81 (33.6 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 189 TVLRNCW--DANNVVLQHAMTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGY 246
T+ RN D + V Q + FKD+ E + + + +D ++ ++ G++ K G
Sbjct: 203 TIFRNSETSDKSVDVSQSTVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPK-GV 261
Query: 247 LLFGPPGTGKSNLIASMA 264
LL GPPGTGK+ L + A
Sbjct: 262 LLTGPPGTGKTLLARATA 279
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 86 (35.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 340 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 382
Score = 74 (31.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D ED + V+ + F +D V P +++ V D N
Sbjct: 136 QVARCTKIINADSEDPKYIIN--VKQFA-KFVVDLSDQVA----PTDIEEGMRVGVDRNK 188
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 189 YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGI 248
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 249 EPPKGVLLFGPPGTGKTLCARAVAN 273
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 85 (35.0 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 294 SRVTLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
SR T++ LL +DG EG II+ TN E LD AL+RPGR D +
Sbjct: 456 SRQTINQLLAEMDGFKP--NEGVIIIGATNFPEALDNALIRPGRFDMQ 501
Score = 80 (33.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
+TF+ + E K+ + + ++ +N +++ G++ K G LL GPPGTGK+ L ++A
Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPK-GILLVGPPGTGKTLLARAVAG 394
Query: 266 HLKFDIYH 273
Y+
Sbjct: 395 EADVPFYY 402
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 83 (34.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 213 LDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMANHL 267
L S+LK I + +++ E ++ G RG LL+GPPGTGK+ + ++AN +
Sbjct: 323 LSSQLKT-IRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEV 376
Score = 81 (33.6 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 295 RVTLSGLLNFIDGSWSWCGEGRIILFW-TNHKEKLDPALLRPGRMDQRAFNYLGISHHH- 352
RV S LL +DG S EG++++ TN LD AL RPGR D+ +GI +
Sbjct: 437 RVVAS-LLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEI--EIGIPNAQD 493
Query: 353 ---LYEQMLIMEMNGTPAEAAGELANSAEAQV 381
+ +++L + A +LA+SA V
Sbjct: 494 RLDILQKLLKKVPHSLTAAEMMQLADSAHGYV 525
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 89 (36.4 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMAN 265
++D+ E+K+ +I+ + + E +++ G RG L +GPPGTGK+ L ++AN
Sbjct: 498 WEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Score = 72 (30.4 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 301 LLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQMLIM 360
LL +DG S + ++ TN E+LD AL+RPGR+D Y+ + E +L
Sbjct: 626 LLTEMDGMTS--KKNVFVIGATNRPEQLDAALVRPGRLDTLV--YVPLPDQASREGILKA 681
Query: 361 EMNGTP 366
++ TP
Sbjct: 682 QLRKTP 687
Score = 44 (20.5 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 136 DLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAV 178
DL+D +A + VRH + KH D + P + K AK +
Sbjct: 97 DLDDGSARINRVVRH---NLRVKHGDIITVHPCPDI-KYAKRI 135
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 87 (35.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ ++N +DG + G I +L TN + LDPALLRPGR+D++
Sbjct: 291 TMLEIVNQLDG---FDARGNIKVLMATNRPDTLDPALLRPGRLDRK 333
Score = 71 (30.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 206 MTFKDLA-LDSELKKMI-IKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASM 263
+T+ D+ +++KM + +L + E + ++G +G L +GPPGTGK+ L ++
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLH--PEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
Query: 264 AN 265
AN
Sbjct: 223 AN 224
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 86 (35.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 297 TLSGLLNFIDGSWSWCGEGRI-ILFWTNHKEKLDPALLRPGRMDQR 341
T+ L+N +DG + G I +L TN + LDPAL+RPGR+D++
Sbjct: 298 TMLELINQLDG---FDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Score = 72 (30.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 36/145 (24%), Positives = 63/145 (43%)
Query: 125 QVPLSVEYINPDLEDHNASLRSEVRHYELSFHKKHTDTVLNLYLPHVLKKAKAVKEDCNT 184
QV + IN D +D + V+ + F D+V P +++ V D N
Sbjct: 94 QVARCTKIINADSDDPKYIIN--VKQFA-KFVVDLADSVA----PTDIEEGMRVGVDRNK 146
Query: 185 VKLHTVLRNCWDANNVVLQHA----MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGR 240
++H L D ++Q +T+ D+ E + + + ++ E + +G
Sbjct: 147 YQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGI 206
Query: 241 VWKRGYLLFGPPGTGKSNLIASMAN 265
+G LLFGPPGTGK+ ++AN
Sbjct: 207 EPPKGVLLFGPPGTGKTLCARAVAN 231
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 85 (35.0 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
F D+A E K I++ ++ +N K+Y + +G +G +L GPPGTGK+ L + A
Sbjct: 299 FADVAGCEEAKLEIMEFVNFLKNPKQY-QDLGAKIPKGAMLTGPPGTGKTLLAKATA 354
Score = 78 (32.5 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGISHHHLYEQ 356
TL+ +L +DG S ++L TN + LDPAL RPGR D++ Y+G + +
Sbjct: 422 TLNQMLVEMDGFNS--STNVVVLAGTNRPDILDPALTRPGRFDRQI--YIGPPD--IKGR 475
Query: 357 MLIMEMNGTPAEAAGELANSA 377
I +++ P + G L+ A
Sbjct: 476 SSIFKVHLRPLKLDGSLSKDA 496
Score = 41 (19.5 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 42 HFVSQYLS----SRITIVIKEFLGLI 63
HFV YL+ R+ +V K+F+ +I
Sbjct: 169 HFVQYYLARGLVDRLEVVNKQFVRVI 194
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 86 (35.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 206 MTFKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
++FKD+A E K + + +D +N + Y ++G +G LL GPPG GK+ L ++A
Sbjct: 297 VSFKDVAGMREAKMEVKEFVDYLKN-PDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVA 354
Score = 78 (32.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQRAFNYLGI--SHHHLY 354
TL+ LL +DG + + I+L TN + LD AL+RPGR+D+ F L ++
Sbjct: 423 TLNQLLVEMDGMGTT--DHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERKEIF 480
Query: 355 EQML-IMEMNGTPAE 368
EQ L I+++ PA+
Sbjct: 481 EQHLKILKLT-QPAD 494
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 86 (35.3 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 208 FKDLALDSELKKMIIKDLDIFRNGKEYYRRVGRVWKRGYLLFGPPGTGKSNLIASMA 264
F D+A E K+ + K++ F E Y ++G +G LL GPPGTGK+ L ++A
Sbjct: 177 FSDVAGVEEAKEEV-KEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVA 232
Score = 76 (31.8 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 297 TLSGLLNFIDGSWSWCGEGRIILFWTNHKEKLDPALLRPGRMDQR 341
TL+ LL +DG + I+L TN E LD ALLRPGR D++
Sbjct: 301 TLNQLLAEMDG-FGTESSPVIVLAATNRPEVLDAALLRPGRFDRQ 344
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 398 376 0.00088 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 249
No. of states in DFA: 619 (66 KB)
Total size of DFA: 259 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.49u 0.13s 31.62t Elapsed: 00:00:03
Total cpu time: 31.53u 0.13s 31.66t Elapsed: 00:00:03
Start: Sat May 11 14:09:34 2013 End: Sat May 11 14:09:37 2013
WARNINGS ISSUED: 1