BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048684
(363 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 76/314 (24%)
Query: 84 KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
K F+L ELQ A+DNFS++N++G+GG+ +VYKG+L DG VA+KRL + + +E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHLIL-ELSPHGSLASLLYAK---------------- 186
+ +I H N+ ++ G+ + L++ +GS+AS L +
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 187 --------WLPDKWTHHIVSK---------------IEGTFG------------------ 205
+L D I+ + + G FG
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 206 ---YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ-------------KSLVM 249
++ PE+ G + EKTDV+ YGV+LLE+ITG++A D ++ K L+
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQII 309
++ LVD L Y E++ +L+ +A C + RP+MS+VV+ L GD LA+
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD--GLAERW 323
Query: 310 EENQSLRRLQRTFS 323
EE Q ++ F+
Sbjct: 324 EEWQKEEMFRQDFN 337
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 76/305 (24%)
Query: 84 KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
K F+L ELQ A+DNF ++N++G+GG+ +VYKG+L DG VA+KRL + + +E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHLIL-ELSPHGSLASLLYAK---------------- 186
+ +I H N+ ++ G+ + L++ +GS+AS L +
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 187 --------WLPDKWTHHIVSK---------------IEGTFG------------------ 205
+L D I+ + + G FG
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 206 ---YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ-------------KSLVM 249
++ PE+ G + EKTDV+ YGV+LLE+ITG++A D ++ K L+
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQII 309
++ LVD L Y E++ +L+ +A C + RP+MS+VV+ L GD LA+
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD--GLAERW 315
Query: 310 EENQS 314
EE Q
Sbjct: 316 EEWQK 320
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 71/281 (25%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
L +L+ AT+NF H+ LIG G + +VYKG L DG VA+KR T S + + +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE-TL 89
Query: 148 VHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPD---KW----------- 192
HP++ +IG+ E M LI + +G+L LY LP W
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 193 -------THHIVSKIEGTFGYLPPEFFMHGIAD--------------------------- 218
T I+ + + L E F+ I D
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 219 ----------EKTDVYAYGVLLLEIITGR----QALDSSQKSLVMWS-------SMKELV 257
EK+DVY++GV+L E++ R Q+L +L W+ ++++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
DP L D E L + A C+ +S RP M V+ L
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 71/281 (25%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
L +L+ AT+NF H+ LIG G + +VYKG L DG VA+KR T S + + +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE-TL 89
Query: 148 VHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPD---KW----------- 192
HP++ +IG+ E M LI + +G+L LY LP W
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 193 -------THHIVSKIEGTFGYLPPEFFMHGIAD--------------------------- 218
T I+ + + L E F+ I D
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 219 ----------EKTDVYAYGVLLLEIITGR----QALDSSQKSLVMWS-------SMKELV 257
EK+DVY++GV+L E++ R Q+L +L W+ ++++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
DP L D E L + A C+ +S RP M V+ L
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 80/294 (27%)
Query: 83 WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
+ +F+ EL+ T+NF N +G+GG+ VYKG + + VA+K+L +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 70
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
EE+ + E+ ++ H N+ +++G+ +G + L+ P+GSL L P
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 191 KW-------------------THHI----------------------------------- 196
W HHI
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
S+I GT Y+ PE + G K+D+Y++GV+LLEIITG A+D ++ ++
Sbjct: 191 MXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
++++ +D + DA +T + + +AS C+++ RP + KV Q L+
Sbjct: 250 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 80/294 (27%)
Query: 83 WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
+ +F+ EL+ T+NF N +G+GG+ VYKG + + VA+K+L +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 70
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
EE+ + E+ ++ H N+ +++G+ +G + L+ P+GSL L P
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 191 KW-------------------THHI----------------------------------- 196
W HHI
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
+I GT Y+ PE + G K+D+Y++GV+LLEIITG A+D ++ ++
Sbjct: 191 MXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
++++ +D + DA +T + + +AS C+++ RP + KV Q L+
Sbjct: 250 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 80/294 (27%)
Query: 83 WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
+ +F+ EL+ T+NF N +G+GG+ VYKG + + VA+K+L +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 64
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
EE+ + E+ ++ H N+ +++G+ +G + L+ P+GSL L P
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 191 KW-------------------THHI----------------------------------- 196
W HHI
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
+I GT Y+ PE + G K+D+Y++GV+LLEIITG A+D ++ ++
Sbjct: 185 MXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 243
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
++++ +D + DA +T + + +AS C+++ RP + KV Q L+
Sbjct: 244 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 80/294 (27%)
Query: 83 WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
+ +F+ EL+ T+NF N G+GG+ VYKG + + VA+K+L +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 61
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
EE+ + E+ + H N+ +++G+ +G + L+ P+GSL L P
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 191 KW-------------------THHI----------------------------------- 196
W HHI
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
S+I GT Y PE + G K+D+Y++GV+LLEIITG A+D ++ ++
Sbjct: 182 XXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 240
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
++++ +D DA +T + +AS C+++ RP + KV Q L+
Sbjct: 241 IEDEEKTIEDYIDKKXNDADST-SVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 82 GWKNFALSELQAATDN-FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----- 134
G F S L DN +E IG+GG+ V+KG+L +D VAIK L G E
Sbjct: 4 GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 135 -EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWT 193
E ++ E+ I+ +++HPNI K+ G + +++E P G L L K P KW+
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 82 GWKNFALSELQAATDN-FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----- 134
G F S L DN +E IG+GG+ V+KG+L +D VAIK L G E
Sbjct: 4 GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 135 -EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWT 193
E ++ E+ I+ +++HPNI K+ G + +++E P G L L K P KW+
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 82 GWKNFALSELQAATDN-FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----- 134
G F S L DN +E IG+GG+ V+KG+L +D VAIK L G E
Sbjct: 4 GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 135 -EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWT 193
E ++ E+ I+ +++HPNI K+ G + +++E P G L L K P KW+
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 54/214 (25%)
Query: 84 KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
KN + Q A ++F +G+G + VY + + +F+ A+K L + E+ ++
Sbjct: 13 KNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 72
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------- 180
E+ I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 73 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 132
Query: 181 ------SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPP 209
S ++K + + W+ H S + GT YLPP
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 192
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
E + DEK D+++ GVL E + G+ +++
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G + S
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 54/214 (25%)
Query: 84 KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
KN + Q A ++F +G+G + VY + + +F+ A+K L + E+ ++
Sbjct: 22 KNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------- 180
E+ I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 141
Query: 181 ------SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPP 209
S ++K + + W+ H S + GT YLPP
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 201
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
E + DEK D+++ GVL E + G+ +++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 54/214 (25%)
Query: 84 KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
KN + Q A ++F +G+G + VY + + +F+ A+K L + E+ ++
Sbjct: 22 KNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------- 180
E+ I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 141
Query: 181 ------SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPP 209
S ++K + + W+ H S + GT YLPP
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPP 201
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
E + DEK D+++ GVL E + G+ +++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 54/211 (25%)
Query: 87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSE 143
A+ Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 144 LGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA---------------------- 180
+ I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 181 ---SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFF 212
S ++K + + W+ H S + GT YLPPE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 181
Query: 213 MHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
+ DEK D+++ GVL E + G+ +++
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G + S
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 125
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 125
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVS----KIEGTFGYLPPEFFMHGIA 217
++K + + W+ H S ++ GT YLPPE +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 54/209 (25%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELG 145
S+ Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------------ 180
I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 124
Query: 181 -SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMH 214
S ++K + + W+ H S + GT YLPPE
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 215 GIADEKTDVYAYGVLLLEIITGRQALDSS 243
+ DEK D+++ GVL E + G+ +++
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 57/215 (26%)
Query: 85 NFALSEL---QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY 140
N AL+E+ + D+F +G+G + VY + + +F+ A+K L + E+ ++
Sbjct: 1 NTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 141 --LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL-------------ASLLY 184
E+ I H+ HPNI +M Y + ++L+LE +P G L S +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 185 AKWLPDK---------------------------------WTHHIVS----KIEGTFGYL 207
+ L D W+ H S + GT YL
Sbjct: 121 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYL 180
Query: 208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDS 242
PPE DEK D++ GVL E + G DS
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + ++ +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 122
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 54/210 (25%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSEL 144
L Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 145 GIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA----------------------- 180
I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 --SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFM 213
S ++K + + W+ H S + GT YLPPE
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIE 182
Query: 214 HGIADEKTDVYAYGVLLLEIITGRQALDSS 243
+ DEK D+++ GVL E + G+ +++
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 57/213 (26%)
Query: 87 ALSEL---QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
AL+E+ + D+F +G+G + VY + + +F+ A+K L + E+ ++
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL-------------ASLLYAK 186
E+ I H+ HPNI +M Y + ++L+LE +P G L S + +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 187 WLPDK---------------------------------WTHHIVS----KIEGTFGYLPP 209
L D W+ H S + GT YLPP
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 181
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDS 242
E DEK D++ GVL E + G DS
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE +
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 57/213 (26%)
Query: 87 ALSEL---QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
AL+E+ + D+F +G+G + VY + + +F+ A+K L + E+ ++
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL-------------ASLLYAK 186
E+ I H+ HPNI +M Y + ++L+LE +P G L S + +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 187 WLPDK---------------------------------WTHHIVS----KIEGTFGYLPP 209
L D W+ H S + GT YLPP
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 181
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDS 242
E DEK D++ GVL E + G DS
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 54/206 (26%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
Q A ++F +G+G + VY + + +F+ A+K L + E+ ++ E+ I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
H+ HPNI ++ GY + ++LILE +P G++ S
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
++K + + W+ H S + GT YLPPE
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
DEK D+++ GVL E + G+ +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GYG 162
+G G + +VYK Q ++ +A ++ EE DY+ E+ I+ DHPNI K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 163 VEGGMHLILELSPHGSLASLL 183
E + +++E G++ +++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM 125
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GYG 162
+G G + +VYK Q ++ +A ++ EE DY+ E+ I+ DHPNI K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 163 VEGGMHLILELSPHGSLASLL 183
E + +++E G++ +++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM 125
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GYG 162
+G G + +VYK Q ++ +A ++ EE DY+ E+ I+ DHPNI K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 163 VEGGMHLILELSPHGSLASLL 183
E + +++E G++ +++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM 125
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 54/202 (26%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDY--LSELGIIVHVDH 152
D+F +G+G + VY + + F VA+K L + E+ ++ E+ I H+ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDK-------------------- 191
PNI ++ Y + ++LILE +P G L L D+
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 192 --------------------------WTHHIVS----KIEGTFGYLPPEFFMHGIADEKT 221
W+ H S + GT YLPPE + +EK
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 222 DVYAYGVLLLEIITGRQALDSS 243
D++ GVL E++ G +S+
Sbjct: 203 DLWCIGVLCYELLVGNPPFESA 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV G L+ G+ FVAIK L G E+ D+LSE I+ DHPN+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
+ G + + +I E +GSL S L
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFL 99
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV G L+ G+ FVAIK L G E+ D+LSE I+ DHPN+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
+ G + + +I E +GSL S L
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFL 125
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YG 162
+G G + +VYK + ++ +A ++ EE DY+ E+ I+ DHP I K++G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 163 VEGGMHLILELSPHGSLASLL 183
+G + +++E P G++ +++
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIM 107
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YG 162
+G G + +VYK + ++ +A ++ EE DY+ E+ I+ DHP I K++G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 163 VEGGMHLILELSPHGSLASLL 183
+G + +++E P G++ +++
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIM 99
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 98 FSHENL-----IGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD 151
+HE+L IG+G + EV+ G+L D VA+K P ++ +L E I+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 152 HPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
HPNI ++IG + +++++EL G + L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 98 FSHENL-----IGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD 151
+HE+L IG+G + EV+ G+L D VA+K P ++ +L E I+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 152 HPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
HPNI ++IG + +++++EL G + L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 61 GSRGLSFNATLVDAEL-----CYLKPGWKNFALS-ELQAATDNFSHENLIGQGGYAEVYK 114
G L F L + + Y +PG + + E++A+ + E +IG G EV
Sbjct: 10 GRENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHI--EKIIGSGDSGEVCY 67
Query: 115 GQLE-DGQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI 170
G+L GQ VAIK L G E D+LSE I+ DHPNI ++ G G + +I
Sbjct: 68 GRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 171 L-ELSPHGSLASLL 183
+ E +GSL + L
Sbjct: 128 VTEYMENGSLDTFL 141
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 61 GSRGLSFNATLVDAEL-----CYLKPGWKNFALS-ELQAATDNFSHENLIGQGGYAEVYK 114
G L F L + + Y +PG + + E++A+ + E +IG G EV
Sbjct: 10 GRENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHI--EKIIGSGDSGEVCY 67
Query: 115 GQLE-DGQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI 170
G+L GQ VAIK L G E D+LSE I+ DHPNI ++ G G + +I
Sbjct: 68 GRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 171 L-ELSPHGSLASLL 183
+ E +GSL + L
Sbjct: 128 VTEYMENGSLDTFL 141
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 32 PRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNAT-----LVDAELCYLKPGWKNF 86
P+K + +P + PKL + + +R S +S + T ++D E Y P +++
Sbjct: 332 PQKEGERALP-----SIPKLANNEKQGVR-SHTVSVSETDDYAEIIDEEDTYTMPSTRDY 385
Query: 87 ALSELQAATDNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLS 142
+ + IG+G + +V++G VAIK + + + +L
Sbjct: 386 EIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 143 ELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS---- 198
E + DHP+I K+IG E + +I+EL G L S L + K++ + S
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILY 496
Query: 199 --KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLL 230
++ YL + F+H D+ A VL+
Sbjct: 497 AYQLSTALAYLESKRFVH------RDIAARNVLV 524
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 32 PRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNAT-----LVDAELCYLKPGWKNF 86
P+K + +P + PKL + + +R S +S + T ++D E Y P +++
Sbjct: 332 PQKEGERALP-----SIPKLANNEKQGVR-SHTVSVSETDDYAEIIDEEDTYTMPSTRDY 385
Query: 87 ALSELQAATDNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLS 142
+ + IG+G + +V++G VAIK + + + +L
Sbjct: 386 EIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 143 ELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS---- 198
E + DHP+I K+IG E + +I+EL G L S L + K++ + S
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILY 496
Query: 199 --KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLL 230
++ YL + F+H D+ A VL+
Sbjct: 497 AYQLSTALAYLESKRFVH------RDIAARNVLV 524
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD----YLSELGIIVH 149
A ++ ++G+G + EVY+G + + I + ++ T D ++SE I+ +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+DHP+I K+IG E +I+EL P+G L L
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL 99
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 103 LIGQ-GGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-G 160
+IG+ G + +VYK Q ++ +A ++ EE DY+ E+ I+ DHPNI K++
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 161 YGVEGGMHLILELSPHGSLASLL 183
+ E + +++E G++ +++
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVM 98
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD----YLSELGIIVH 149
A ++ ++G+G + EVY+G + + I + ++ T D ++SE I+ +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+DHP+I K+IG E +I+EL P+G L L
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL 115
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD----YLSELGIIVH 149
A ++ ++G+G + EVY+G + + I + ++ T D ++SE I+ +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+DHP+I K+IG E +I+EL P+G L L
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL 103
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 54/202 (26%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELG 145
S+ Q ++F +G+G + VY + +F+ A+K L + E+ ++ E+
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------------ 180
I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 181 -SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMH 214
S ++K + + W+ H S + GT YLPPE
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 215 GIADEKTDVYAYGVLLLEIITG 236
+ DEK D+++ GVL E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 54/202 (26%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELG 145
S+ Q ++F +G+G + VY + +F+ A+K L + E+ ++ E+
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------------ 180
I H+ HPNI ++ GY + ++LILE +P G++
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 181 -SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMH 214
S ++K + + W+ H S + GT YLPPE
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 215 GIADEKTDVYAYGVLLLEIITG 236
+ DEK D+++ GVL E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 64/259 (24%)
Query: 97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHP 153
NF E IG+G ++EVY+ L DG VA+K++ + D + E+ ++ ++HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLL-----YAKWLPDK--WTHHI--VSKIE-- 201
N+ K +E ++++LEL+ G L+ ++ + +P++ W + + S +E
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 202 ---------------------------------------------GTFGYLPPEFFMHGI 216
GT Y+ PE
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212
Query: 217 ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD-PTLGDAYNTEQLTRLLL 275
+ K+D+++ G LL E+ + + +L E D P L + +E+L +L+
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV- 271
Query: 276 IASACINQTSACRPQMSKV 294
+ CIN RP ++ V
Sbjct: 272 --NMCINPDPEKRPDVTYV 288
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 102 NLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
++G G + VYKG + +G+ V AIK L + + +++ E I+ +DHP++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLLY 184
+++G + + L+ +L PHG L ++
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVH 108
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 102 NLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
++G G + VYKG + +G+ V AIK L + + +++ E I+ +DHP++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLLY 184
+++G + + L+ +L PHG L ++
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVH 131
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 12 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 108
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 12 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 108
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 9 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 107
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 97 NFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
N S + ++G G + EV G+L+ VAIK L G E+ D+L E I+ DH
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
PNI ++ G + + ++ E +GSL S L
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 125
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 6 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 104
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 7 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 105
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 103
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 7 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 105
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 9 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 107
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 7 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 105
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 106
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 39 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
EL A N S + ++G G + EV G+L+ VAIK L G E+ D+L E
Sbjct: 41 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
I+ DHPNI ++ G + + ++ E +GSL S L
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 6 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXL 104
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV G+L+ G+ VAIK L G E+ D+L E I+ DHPN+
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
+ G G + +++E +G+L + L
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL 135
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 99 SHENLIGQGGYAEVYKGQLEDGQF-----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
+ + +IG G + EVYKG L+ VAIK L G E+ D+L E GI+ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 154 NIAKMIGY-GVEGGMHLILELSPHGSLASLLYAK 186
NI ++ G M +I E +G+L L K
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREK 140
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
++ +++IG+G + +V K +++ DG + AIKR+ + ++ D+ EL ++ +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
HPNI ++G G ++L +E +PHG+L L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
++ +++IG+G + +V K +++ DG + AIKR+ + ++ D+ EL ++ +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
HPNI ++G G ++L +E +PHG+L L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
++ +++IG+G + +V K +++ DG + AIKR+ + ++ D+ EL ++ +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
HPNI ++G G ++L +E +PHG+L L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 15 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 73
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 74 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 113
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV +G+L+ VAIK L G E ++LSE I+ +HPNI
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 157 KMIGYGVEGGMHLIL-ELSPHGSLASLL 183
++ G +IL E +G+L S L
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFL 106
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV +G+L+ VAIK L G E ++LSE I+ +HPNI
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 157 KMIGYGVEGGMHLIL-ELSPHGSLASLL 183
++ G +IL E +G+L S L
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFL 108
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 98 FSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
F ++G G + VYKG + +G+ V AIK L + + + L E ++ VD+
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 153 PNIAKMIGYGVEGGMHLILELSPHGSL 179
P++ +++G + + LI +L P G L
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCL 97
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 7 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 105
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 106
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 106
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 8 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 106
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 7 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 105
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 12 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 110
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 12 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 110
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 11 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 69
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 70 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 109
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 30 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 88
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 89 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 128
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 98 FSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
F ++G G + VYKG + +G+ V AIK L + + + L E ++ VD+
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 153 PNIAKMIGYGVEGGMHLILELSPHGSL 179
P++ +++G + + LI +L P G L
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCL 100
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G VAIK + + + +L E + DHP+I K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 134 H------RDIAARNVLV 144
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV G+L+ G+ VAIK L G ++ D+LSE I+ DHPNI
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
+ G + + +I E +GSL + L
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFL 121
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AIK L + + +
Sbjct: 5 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXL 103
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G VAIK + + + +L E + DHP+I K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 134 H------RDIAARNVLV 144
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV G+L+ G+ VAIK L G ++ D+LSE I+ DHPNI
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
+ G + + +I E +GSL + L
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFL 106
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 104 IGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G VAIK + + + +L E + DHP+I K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAK 186
G E + +I+EL G L S L +
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVR 104
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV G+L+ G+ VAIK L G ++ D+LSE I+ DHPNI
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
+ G + + +I E +GSL + L
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFL 100
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G + VAIK + + + +L E + DHP+I K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 135
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 136 H------RDIAARNVLV 146
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G + VAIK + + + +L E + DHP+I K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 134 H------RDIAARNVLV 144
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G + VAIK + + + +L E + DHP+I K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 130
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 131 H------RDIAARNVLV 141
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 96 DNFSHENLIGQGGYAEVYKGQ------LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
+N + IG+G + V++ + E VA+K L + +M D+ E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
D+PNI K++G G M L+ E +G L L
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE + ++DV+AYGV+L EI +
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G + VAIK + + + +L E + DHP+I K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 136
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 137 H------RDIAARNVLV 147
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G + VAIK + + + +L E + DHP+I K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 161
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 162 H------RDIAARNVLV 172
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
IG+G + +V++G + VAIK + + + +L E + DHP+I K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
G E + +I+EL G L S L + K++ + S ++ YL + F+
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 138
Query: 214 HGIADEKTDVYAYGVLL 230
H D+ A VL+
Sbjct: 139 H------RDIAARNVLV 149
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++ G + VYKG + +G+ V AIK L + + +
Sbjct: 12 NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI++L P G L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 110
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++G G + VYKG + +G+ V AI L + + +
Sbjct: 39 NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE 97
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 98 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 137
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
E +IG G + EV G+L+ G+ VAIK L G E+ D+L E I+ DHPNI
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
+ G + + ++ E +GSL + L
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL 114
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRL-TRGSPEEMTTDYLSELG 145
LS L+ F L+G G Y +VYKG+ ++ GQ AIK + G EE ++ L
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK 75
Query: 146 IIVHVDHPNIAKMIGY-------GVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHH 195
H H NIA G G++ + L++E GS+ L+ L ++W +
Sbjct: 76 KYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLE 232
I +I +L +H D+ VLL E
Sbjct: 134 ICREILRGLSHLHQHKVIH------RDIKGQNVLLTE 164
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++ G + VYKG + +G+ V AIK L + + +
Sbjct: 5 NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
++G+G Y VY G+ L + +AIK + + E+ + H+ H NI + +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 162 GVEGG-MHLILELSPHGSLASLLYAKWLPDK 191
E G + + +E P GSL++LL +KW P K
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
N AL + T+ F ++ G + VYKG + +G+ V AIK L + + +
Sbjct: 12 NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
L E ++ VD+P++ +++G + + LI +L P G L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 110
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 84 KNFALSEL-QAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEM 136
K ++S+L + N + +G G + EVY+GQ+ VA+K L E+
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 137 TTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
D+L E II ++H NI + IG ++ ++LEL G L S L
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSEL 144
N +++++ NF + QG Y + K Q++ VAIK L +G+ + T + + E
Sbjct: 10 NLLIADIELGCGNFGS---VRQGVY-RMRKKQID----VAIKVLKQGTEKADTEEMMREA 61
Query: 145 GIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKW--LPDKWTHHIVSKIEG 202
I+ +D+P I ++IG + L++E++ G L L K +P ++ ++
Sbjct: 62 QIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 121
Query: 203 TFGYLPPEFFMHGIADEKTDVYAYGVLLL 231
YL + F+H D+ A VLL+
Sbjct: 122 GMKYLEEKNFVH------RDLAARNVLLV 144
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFL 151
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II ++H NI +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFL 139
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFL 131
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD--SSQKSLVMWSSMKELVD 258
+G+ ++ PE F EK DV+++G++L E+IT R+ D +MW+
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 223
Query: 259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
P + N + L+ + C ++ + RP M ++V+ +
Sbjct: 224 PLIK---NLPKPIESLM--TRCWSKDPSQRPSMEEIVKIM 258
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
E ++G+G + V K + + VAIK++ E ++ EL + V+HPNI K+ G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 161 YGVEGGMHLILELSPHGSLASLLYA 185
+ L++E + GSL ++L+
Sbjct: 69 -ACLNPVCLVMEYAEGGSLYNVLHG 92
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
++G+G Y VY G+ L + +AIK + + E+ + H+ H NI + +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 162 GVEGG-MHLILELSPHGSLASLLYAKWLPDK 191
E G + + +E P GSL++LL +KW P K
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLK 104
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFL 125
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFL 141
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFL 125
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFL 124
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD--SSQKSLVMWSSMKELVD 258
+G+ ++ PE F EK DV+++G++L E+IT R+ D +MW+
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 224
Query: 259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
P + N + L+ + C ++ + RP M ++V+ +
Sbjct: 225 PLIK---NLPKPIESLM--TRCWSKDPSQRPSMEEIVKIM 259
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
E ++G+G + V K + + VAIK++ E ++ EL + V+HPNI K+ G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 161 YGVEGGMHLILELSPHGSLASLLYA 185
+ L++E + GSL ++L+
Sbjct: 70 -ACLNPVCLVMEYAEGGSLYNVLHG 93
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 158 MIGYGVEGGMHLIL-ELSPHGSLASLL 183
IG ++ IL EL G L S L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFL 124
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFL 165
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFL 142
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 84 KNFALSEL-QAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEM 136
K ++S+L + N + +G G + EVY+GQ+ VA+K L E+
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 137 TTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
D+L E II +H NI + IG ++ ++LEL G L S L
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
A SE DN LIG+G Y VYKG L D + VA+K + + + ++++E I
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ----NFINEKNI 58
Query: 147 --IVHVDHPNIAKMI----GYGVEGGMH--LILELSPHGSLA---SLLYAKWLPDKWTHH 195
+ ++H NIA+ I +G M L++E P+GSL SL + W+ H
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH 118
Query: 196 IVSK 199
V++
Sbjct: 119 SVTR 122
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 158 MIGYGVEGGMHLIL-ELSPHGSLASLL 183
IG ++ IL EL G L S L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFL 139
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDYLSELG 145
+L + + + + ++ +G G Y EVY+G + VA+K L + E ++L E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAA 59
Query: 146 IIVHVDHPNIAKMIGYGV-EGGMHLILELSPHGSLASLL 183
++ + HPN+ +++G E ++I+E +G+L L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 98
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 104 IGQGGYAEVYKGQ---LED--GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+G+G + V + L+D G+ VA+K+L S EE D+ E+ I+ + H NI K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 159 IGYGVEGG---MHLILELSPHGSLASLLYA 185
G G + LI+E P+GSL L A
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQA 109
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+G G + EVY+GQ+ VA+K L E+ D+L E II +H NI +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
IG ++ ++LEL G L S L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFL 139
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++PPE FM GI KTD +++GVLL EI +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 85 NFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSEL 144
N +++++ NF + QG Y + K Q++ VAIK L +G+ + T + + E
Sbjct: 336 NLLIADIELGCGNFGS---VRQGVY-RMRKKQID----VAIKVLKQGTEKADTEEMMREA 387
Query: 145 GIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKW--LPDKWTHHIVSKIEG 202
I+ +D+P I ++IG + L++E++ G L L K +P ++ ++
Sbjct: 388 QIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 447
Query: 203 TFGYLPPEFFMH 214
YL + F+H
Sbjct: 448 GMKYLEEKNFVH 459
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + V+ G + VAIK + GS E D++ E +++ + HP + ++ G +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE--DDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 164 EGG-MHLILELSPHGSLASLL 183
E + L+ E HG L+ L
Sbjct: 93 EQAPICLVFEFMEHGCLSDYL 113
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVM--WSSMKELVDPTLGDAY 265
PE F K+DV+++GVL+ E+ + G+ ++ S V+ S+ L P L
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS-- 250
Query: 266 NTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
T + I + C + RP S++++ L
Sbjct: 251 -----THVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDYLSELG 145
+L + + + + ++ +G G Y EVY+G + VA+K L + E ++L E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAA 59
Query: 146 IIVHVDHPNIAKMIGYGV-EGGMHLILELSPHGSLASLL 183
++ + HPN+ +++G E ++I E +G+L L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 98
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 91 LQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVH 149
Q + + +G+G Y VYK + G+ VA+KR+ + +E + + + E+ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 150 VDHPNIAKMI 159
+ HPNI +I
Sbjct: 76 LHHPNIVSLI 85
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 91 LQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVH 149
Q + + +G+G Y VYK + G+ VA+KR+ + +E + + + E+ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 150 VDHPNIAKMI 159
+ HPNI +I
Sbjct: 76 LHHPNIVSLI 85
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF 86
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 2 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 54
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 55 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 99
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 3 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 55
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 56 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 100
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVD 151
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HPNIAKMIGY-GVEGGMHLILEL 173
HPNI K++ E ++L+ E
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF 83
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + V+ G + VAIK + G+ E D++ E +++ + HP + ++ G +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 164 EGG-MHLILELSPHGSLASLL 183
E + L+ E HG L+ L
Sbjct: 71 EQAPICLVFEFMEHGCLSDYL 91
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVM--WSSMKELVDPTLG 262
+ PE F K+DV+++GVL+ E+ + G+ ++ S V+ S+ L P L
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 227
Query: 263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
T + I + C + RP S++++ L
Sbjct: 228 S-------THVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVD 151
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HPNIAKMIGY-GVEGGMHLILEL 173
HPNI K++ E ++L+ E
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF 83
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF 84
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 1 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 53
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 98
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE +G K+DV+++G+LL EI+T
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 7 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 59
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 104
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 6 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 58
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 59 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 103
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 1 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 53
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 98
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEF 85
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF 84
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF 86
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVD 151
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HPNIAKMIGY-GVEGGMHLILEL 173
HPNI K++ E ++L+ E
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF 83
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVD 151
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HPNIAKMIGY-GVEGGMHLILEL 173
HPNI K++ E ++L+ E
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF 83
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEF 85
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 101 ENLIGQGGYAEVYKG----QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+ +IG+G + VY G Q ++ AIK L+R + + +L E ++ ++HPN+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 157 KMIGYGV--EGGMHLILELSPHGSLASLL 183
+IG + EG H++L HG L +
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFI 114
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF 86
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEF 85
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + V+ G + VAIK + G+ E D++ E +++ + HP + ++ G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 164 EGG-MHLILELSPHGSLASLL 183
E + L+ E HG L+ L
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL 93
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKS 246
L D++T +K + PE F K+DV+++GVL+ E+ + G+ ++ S
Sbjct: 154 LDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS 211
Query: 247 LVM--WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
V+ S+ L P L T + I + C + RP S++++ L
Sbjct: 212 EVVEDISTGFRLYKPRLAS-------THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 10 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 62
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 63 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 107
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF 84
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 94 ATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVD 151
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 152 HPNIAKMIGY-GVEGGMHLILEL 173
HPNI K++ E ++L+ E
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF 83
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF 83
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF 84
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEF 85
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + V+ G + VAIK + G+ E D++ E +++ + HP + ++ G +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 164 EGG-MHLILELSPHGSLASLL 183
E + L+ E HG L+ L
Sbjct: 76 EQAPICLVFEFMEHGCLSDYL 96
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVM--WSSMKELVDPTLG 262
+ PE F K+DV+++GVL+ E+ + G+ ++ S V+ S+ L P L
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 232
Query: 263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
T + I + C + RP S++++ L
Sbjct: 233 S-------THVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF 83
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 7 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 59
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 104
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF 82
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF 82
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF 82
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 1 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 53
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 98
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE +G K+DV+++G+LL EI+T
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF 83
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF 86
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEF 87
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + V+ G + VAIK + G+ E D++ E +++ + HP + ++ G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 164 EGG-MHLILELSPHGSLASLL 183
E + L+ E HG L+ L
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL 93
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKS 246
L D++T +K + PE F K+DV+++GVL+ E+ + G+ ++ S
Sbjct: 154 LDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS 211
Query: 247 LVM--WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
V+ S+ L P L T + I + C + RP S++++ L
Sbjct: 212 EVVEDISTGFRLYKPRLAS-------THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 9 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 61
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 62 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 106
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE +G K+DV+++G+LL EI+T
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 151 DHPNIAKMIGY-GVEGGMHLILEL 173
+HPNI K++ E ++L+ E
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF 86
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF 87
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF 82
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF 83
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV 150
+ +NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 151 DHPNIAKMIGY-GVEGGMHLILE 172
+HPNI K++ E ++L+ E
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFE 85
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF 90
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ E + + +G G + EV+ G VA+K L +GS M+ D
Sbjct: 11 KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPD 63
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 64 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 108
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE +G K+DV+++G+LL EI+T
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 154 NIAKMIGY-GVEGGMHLILE 172
NI K++ E ++L+ E
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF 84
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+K++ + E + + + E+ ++ ++HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF 90
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 IGQGGYAEVYKGQLE--DGQFVAI-----KRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+G G + V +G+ + G+ V++ K PE M D++ E+ + +DH N+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFGYLPPEFFM 213
++ G + M ++ EL+P GSL L +L + + V EG GYL + F+
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-MGYLESKRFI 137
Query: 214 H 214
H
Sbjct: 138 H 138
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQL--EDGQFVAIKRLTRGSPEEMTTD---YLS 142
L ++ F+ ++G+G + V + QL EDG FV + + ++D +L
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 143 ELGIIVHVDHPNIAKMIGYGVEGGMH-------LILELSPHGSLASLLYAKW-------L 188
E + DHP++AK++G + +IL HG L + L A L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 189 PDKWTHHIVSKIEGTFGYLPPEFFMHG--------IADEKTDVYAYGVLLLEIITG---R 237
P + + I YL F+H +A++ T A L +I +G R
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 238 QALDSSQKSLVMWSSMKELVD 258
Q S K V W +++ L D
Sbjct: 195 QGCAS--KLPVKWLALESLAD 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 8/131 (6%)
Query: 61 GSRGLSFN-ATLVDAELCYLKPGWKNFALSELQAATDNFSHEN-LIGQGGYAEVYKGQL- 117
GS L F A V +L L P + + H N +IG+G + VY G L
Sbjct: 52 GSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLL 111
Query: 118 -EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV--EGGMHLILE 172
DG+ + A+K L R + + +L+E I+ HPN+ ++G + EG ++L
Sbjct: 112 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171
Query: 173 LSPHGSLASLL 183
HG L + +
Sbjct: 172 YMKHGDLRNFI 182
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 59/212 (27%)
Query: 83 WKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLED-GQFVAI-----KRLTRGSPEEM 136
WKN L+ + ++FS +IG+GG+ EVY + D G+ A+ KR+ E +
Sbjct: 176 WKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 234
Query: 137 TTDYLSELGIIVHVDHPNIAKM-IGYGVEGGMHLILE----------LSPHGSLA----- 180
+ L ++ D P I M + + IL+ LS HG +
Sbjct: 235 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR 294
Query: 181 ---------------------SLLYAKWLPDKWTHHIVSKIE--------------GTFG 205
L A L D+ H +S + GT G
Sbjct: 295 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 354
Query: 206 YLPPEFFMHGIA-DEKTDVYAYGVLLLEIITG 236
Y+ PE G+A D D ++ G +L +++ G
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + V+ G + VAIK + G+ E D++ E +++ + HP + ++ G +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 164 EGG-MHLILELSPHGSLASLL 183
E + L+ E HG L+ L
Sbjct: 74 EQAPICLVTEFMEHGCLSDYL 94
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVM--WSSMKELVDPTLG 262
+ PE F K+DV+++GVL+ E+ + G+ ++ S V+ S+ L P L
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 230
Query: 263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
T + I + C + RP S++++ L
Sbjct: 231 S-------THVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 59/212 (27%)
Query: 83 WKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLED-GQFVAI-----KRLTRGSPEEM 136
WKN L+ + ++FS +IG+GG+ EVY + D G+ A+ KR+ E +
Sbjct: 177 WKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 235
Query: 137 TTDYLSELGIIVHVDHPNIAKM-IGYGVEGGMHLILE----------LSPHGSLA----- 180
+ L ++ D P I M + + IL+ LS HG +
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR 295
Query: 181 ---------------------SLLYAKWLPDKWTHHIVSKIE--------------GTFG 205
L A L D+ H +S + GT G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 355
Query: 206 YLPPEFFMHGIA-DEKTDVYAYGVLLLEIITG 236
Y+ PE G+A D D ++ G +L +++ G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 59/212 (27%)
Query: 83 WKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLED-GQFVAI-----KRLTRGSPEEM 136
WKN L+ + ++FS +IG+GG+ EVY + D G+ A+ KR+ E +
Sbjct: 177 WKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 235
Query: 137 TTDYLSELGIIVHVDHPNIAKM-IGYGVEGGMHLILE----------LSPHGSLA----- 180
+ L ++ D P I M + + IL+ LS HG +
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR 295
Query: 181 ---------------------SLLYAKWLPDKWTHHIVSKIE--------------GTFG 205
L A L D+ H +S + GT G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 355
Query: 206 YLPPEFFMHGIA-DEKTDVYAYGVLLLEIITG 236
Y+ PE G+A D D ++ G +L +++ G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 59/212 (27%)
Query: 83 WKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLED-GQFVAI-----KRLTRGSPEEM 136
WKN L+ + ++FS +IG+GG+ EVY + D G+ A+ KR+ E +
Sbjct: 177 WKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL 235
Query: 137 TTDYLSELGIIVHVDHPNIAKM-IGYGVEGGMHLILE----------LSPHGSLA----- 180
+ L ++ D P I M + + IL+ LS HG +
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR 295
Query: 181 ---------------------SLLYAKWLPDKWTHHIVSKIE--------------GTFG 205
L A L D+ H +S + GT G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 355
Query: 206 YLPPEFFMHGIA-DEKTDVYAYGVLLLEIITG 236
Y+ PE G+A D D ++ G +L +++ G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 IGQGGYAEVYKGQLE--DGQFVAI-----KRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+G G + V +G+ + G+ V++ K PE M D++ E+ + +DH N+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 84
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFGYLPPEFFM 213
++ G + M ++ EL+P GSL L +L + + V EG GYL + F+
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-MGYLESKRFI 143
Query: 214 H 214
H
Sbjct: 144 H 144
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 IGQGGYAEVYKGQLE--DGQFVAI-----KRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+G G + V +G+ + G+ V++ K PE M D++ E+ + +DH N+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFGYLPPEFFM 213
++ G + M ++ EL+P GSL L +L + + V EG GYL + F+
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-MGYLESKRFI 133
Query: 214 H 214
H
Sbjct: 134 H 134
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 IGQGGYAEVYKGQLE--DGQFVAI-----KRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+G G + V +G+ + G+ V++ K PE M D++ E+ + +DH N+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFGYLPPEFFM 213
++ G + M ++ EL+P GSL L +L + + V EG GYL + F+
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-MGYLESKRFI 137
Query: 214 H 214
H
Sbjct: 138 H 138
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 IGQGGYAEVYKGQLE--DGQFVAI-----KRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+G G + V +G+ + G+ V++ K PE M D++ E+ + +DH N+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFGYLPPEFFM 213
++ G + M ++ EL+P GSL L +L + + V EG GYL + F+
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-MGYLESKRFI 133
Query: 214 H 214
H
Sbjct: 134 H 134
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 IGQGGYAEVYKGQLE--DGQFVAI-----KRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+G G + V +G+ + G+ V++ K PE M D++ E+ + +DH N+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFGYLPPEFFM 213
++ G + M ++ EL+P GSL L +L + + V EG GYL + F+
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-MGYLESKRFI 133
Query: 214 H 214
H
Sbjct: 134 H 134
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 104 IGQGGYAEVYKGQLE--DGQFVAI-----KRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
+G G + V +G+ + G+ V++ K PE M D++ E+ + +DH N+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 84
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFGYLPPEFFM 213
++ G + M ++ EL+P GSL L +L + + V EG GYL + F+
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG-MGYLESKRFI 143
Query: 214 H 214
H
Sbjct: 144 H 144
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 78
Query: 164 EGGMHLILELSPHGSLASLLYA 185
+ + ++ + SL L+A
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHA 100
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE---KTDVYAYGVLLLEIITGR 237
+W+ H ++ G+ ++ PE ++ ++DVYA+G++L E++TG+
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 123 VAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSLA 180
VA+K L SP E+ D LSE ++ V+HP++ K+ G +G + LI+E + +GSL
Sbjct: 56 VAVKMLKENASPSELR-DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 181 SLL 183
L
Sbjct: 115 GFL 117
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 123 VAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSLA 180
VA+K L SP E+ D LSE ++ V+HP++ K+ G +G + LI+E + +GSL
Sbjct: 56 VAVKMLKENASPSELR-DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 181 SLL 183
L
Sbjct: 115 GFL 117
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 123 VAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSLA 180
VA+K L SP E+ D LSE ++ V+HP++ K+ G +G + LI+E + +GSL
Sbjct: 56 VAVKMLKENASPSELR-DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 181 SLL 183
L
Sbjct: 115 GFL 117
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 90
Query: 164 EGGMHLILELSPHGSLASLLYA 185
+ + ++ + SL L+A
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHA 112
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE---KTDVYAYGVLLLEIITGR 237
+W+ H ++ G+ ++ PE ++ ++DVYA+G++L E++TG+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFI 121
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDH 152
++F NL+G+G +A VY+ + + G VAIK + + + + M +E+ I + H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEF 211
P+I ++ Y + ++L+LE+ +G + L + P F
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP--------------FSENEARH 116
Query: 212 FMHGIADEKTDVYAYGVL 229
FMH I ++++G+L
Sbjct: 117 FMHQIITGMLYLHSHGIL 134
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFI 122
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 60/194 (30%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLT-RGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-- 160
IG G + V++ + G VA+K L + E ++L E+ I+ + HPNI +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 161 ----------------------------------------YGVEGGMHLILELSP---HG 177
Y V GM+ + +P H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 178 SLAS--LLYAKWLPDKWTHHIVSKIE-----------GTFGYLPPEFFMHGIADEKTDVY 224
+L S LL K K +S+++ GT ++ PE ++EK+DVY
Sbjct: 164 NLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVY 223
Query: 225 AYGVLLLEIITGRQ 238
++GV+L E+ T +Q
Sbjct: 224 SFGVILWELATLQQ 237
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 117 LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPH 176
+E G+ ++ R ++ P + Y +E+ + + H +K I Y +++L+ + H
Sbjct: 88 IEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGH 144
Query: 177 GSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
+ +AK++PD + + GT Y+ PE ++ D +++G+L+ E++ G
Sbjct: 145 IKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFI 115
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFI 124
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFI 124
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFI 128
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFI 122
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFI 142
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFI 120
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFI 141
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFI 121
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 103 LIGQGGYAEVYKGQL--EDGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+IG+G + VY G L DG+ + A+K L R + + +L+E I+ HPN+ +
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 159 IGYGV--EGGMHLILELSPHGSLASLL 183
+G + EG ++L HG L + +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFI 118
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 90
Query: 164 EGGMHLILELSPHGSLASLLYA 185
+ ++ + SL L+A
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHA 112
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE---KTDVYAYGVLLLEIITGR 237
+W+ H ++ G+ ++ PE ++ ++DVYA+G++L E++TG+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 60/194 (30%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLT-RGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-- 160
IG G + V++ + G VA+K L + E ++L E+ I+ + HPNI +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 161 ----------------------------------------YGVEGGMHLILELSP---HG 177
Y V GM+ + +P H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 178 SLAS--LLYAKWLPDKWTHHIVSKIE-----------GTFGYLPPEFFMHGIADEKTDVY 224
L S LL K K +S+++ GT ++ PE ++EK+DVY
Sbjct: 164 DLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVY 223
Query: 225 AYGVLLLEIITGRQ 238
++GV+L E+ T +Q
Sbjct: 224 SFGVILWELATLQQ 237
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+ ++ + E + + + E+ ++ ++HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF 83
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHP 153
+NF IG+G Y VYK + + G+ VA+ ++ + E + + + E+ ++ ++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 154 NIAKMIGY-GVEGGMHLILEL 173
NI K++ E ++L+ E
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF 82
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMT 137
KP + A + ++ E +GQG + EV+ G VAIK L G SPE
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 225
Query: 138 TDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L E ++ + H + ++ E ++++ E GSL L
Sbjct: 226 --FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 269
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS-SMKELVDPT 260
G + ++ PE + + +DV++YGVLL E++TG V + +M +L P
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI 235
Query: 261 LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
+ E +L+ C N RP + ++ L
Sbjct: 236 --PSTCPEPFAKLM---EDCWNPDPHSRPSFTNILDQL 268
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYL----SELGIIVHVDHPNIA 156
E +IG GG+ +VY+ G VA+K R P+E + + E + + HPNI
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKA-ARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 157 KMIGYGV-EGGMHLILELSPHGSLASLLYAKWLP 189
+ G + E + L++E + G L +L K +P
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP 103
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMT 137
KP + A + ++ E +GQG + EV+ G VAIK L G SPE
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 225
Query: 138 TDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L E ++ + H + ++ E ++++ E GSL L
Sbjct: 226 --FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 269
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD-YLSELGIIVHVDHPNIAKMIGYG 162
+G G + EV+ G VA+K L +GS M+ D +L+E ++ + H + ++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 163 VEGGMHLILELSPHGSLASLL 183
+ +++I E +GSL L
Sbjct: 73 TQEPIYIITEYMENGSLVDFL 93
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE +G K+DV+++G+LL EI+T
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD-YLSELGIIVHVDHPNIAKMIGYG 162
+G G + EV+ G VA+K L +GS M+ D +L+E ++ + H + ++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 163 VEGGMHLILELSPHGSLASLL 183
+ +++I E +GSL L
Sbjct: 74 TQEPIYIITEYMENGSLVDFL 94
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE +G K+DV+++G+LL EI+T
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 84 KNFALSELQAATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMT 137
K L E+ + F E +G+ + +VYKG L E Q VAIK L + +
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 138 TDYLSELGIIVHVDHPNIAKMIGYGV-EGGMHLILELSPHGSLASLL 183
++ E + + HPN+ ++G + + +I HG L L
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 98 FSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD---YLSELGIIVHVDHPN 154
++ EN IG+G + EV K ++ G I+R + P+ D + E+ I+ +DHPN
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKG--TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 155 IAKMI-GYGVEGGMHLILELSPHGSL 179
I ++ + ++L++EL G L
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGEL 110
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMT 137
KP + A + ++ E +GQG + EV+ G VAIK L G SPE
Sbjct: 169 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-- 226
Query: 138 TDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L E ++ + H + ++ E ++++ E GSL L
Sbjct: 227 --FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 270
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 94
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLH 115
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGRQALDS-S 243
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+ + +
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
Query: 244 QKSLVMWSSMKELVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
+ +++ + + P L + + + RL+ + C+ + RP +++ ++
Sbjct: 234 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELL 290
Query: 302 EEALAQI 308
+L +I
Sbjct: 291 ARSLPKI 297
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 100 HENLIGQGGYAEVYK-GQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
H ++G+G + + K E G+ + +K L R EE +L E+ ++ ++HPN+ K
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 159 IG 160
IG
Sbjct: 73 IG 74
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 51/142 (35%), Gaps = 6/142 (4%)
Query: 189 PDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV 248
PD+ + V G ++ PE DEK DV+++G++L EII GR D
Sbjct: 174 PDRKKRYTVV---GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRT 229
Query: 249 MWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQI 308
M + V L I C + RP K+ L LA
Sbjct: 230 MDFGLN--VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287
Query: 309 IEENQSLRRLQRTFSEEFFDAE 330
+ L +L R F E + E
Sbjct: 288 LPLGPQLEQLDRGFWETYRRGE 309
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Query: 98 FSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
F+ + IG+G + EVYKG + VAIK + E+ D E+ ++ D P I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 157 KMIG-YGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
+ G Y + +I+E GS LL L + + I+ +I YL E +H
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIH- 139
Query: 216 IADEKTDVYAYGVLLLE 232
D+ A VLL E
Sbjct: 140 -----RDIKAANVLLSE 151
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 98 FSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD---YLSELGIIVHVDHPN 154
++ EN IG+G + EV K ++ G I+R + P+ D + E+ I+ +DHPN
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKG--TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 155 IAKMI-GYGVEGGMHLILELSPHGSL 179
I ++ + ++L++EL G L
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGEL 93
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 101
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLH 122
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGRQALDS-S 243
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+ + +
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
Query: 244 QKSLVMWSSMKELVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
+ +++ + + P L + + + RL+ + C+ + RP +++ ++
Sbjct: 241 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELL 297
Query: 302 EEALAQI 308
+L +I
Sbjct: 298 ARSLPKI 304
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
+ + GT YL PE D ++DVY+ G +L E++TG V + ++E
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE-- 234
Query: 258 DP 259
DP
Sbjct: 235 DP 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 102
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH 123
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGRQALDS-S 243
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+ + +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 244 QKSLVMWSSMKELVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
+ +++ + + P L + + + RL+ + C+ + RP +++ ++
Sbjct: 242 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELL 298
Query: 302 EEALAQI 308
+L +I
Sbjct: 299 ARSLPKI 305
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 74
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH 95
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGR 237
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 102
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH 123
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGRQALDS-S 243
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+ + +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 244 QKSLVMWSSMKELVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
+ +++ + + P L + + + RL+ + C+ + RP +++ ++
Sbjct: 242 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELL 298
Query: 302 EEALAQI 308
+L +I
Sbjct: 299 ARSLPKI 305
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 79
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH 100
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGR 237
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 74
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH 95
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGR 237
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 76
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLH 97
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGRQALDS-S 243
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+ + +
Sbjct: 158 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
Query: 244 QKSLVMWSSMKELVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
+ +++ + + P L + + + RL+ + C+ + RP +++ ++
Sbjct: 216 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELL 272
Query: 302 EEALAQI 308
+L +I
Sbjct: 273 ARSLPKI 279
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 79
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ + ++ + SL L+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH 100
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGRQALDS-S 243
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+ + +
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
Query: 244 QKSLVMWSSMKELVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
+ +++ + + P L + + + RL+ + C+ + RP +++ ++
Sbjct: 219 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELL 275
Query: 302 EEALAQI 308
+L +I
Sbjct: 276 ARSLPKI 282
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 81 PGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTD 139
P WK + + D + +++G G ++EV + + Q VAIK + + + E
Sbjct: 8 PRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
+E+ ++ + HPNI + GG ++LI++L G L
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V I ++ +PE+ + +E+ ++ H NI +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA-FRNEVAVLRKTRHVNILLFMGYMT 102
Query: 164 EGGMHLILELSPHGSLASLLYAK 186
+ + ++ + SL L+ +
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQ 125
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 220 KTDVYAYGVLLLEIITGRQALDS-SQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS 278
++DVY+YG++L E++TG + + +++ + P L Y L+A
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVAD 276
Query: 279 ACINQTSACRPQMSKVVQALRGDEEALAQI 308
C+ + RP +++ ++ + +L +I
Sbjct: 277 -CVKKVKEERPLFPQILSSIELLQHSLPKI 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 81 PGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTD 139
P WK + + D + +++G G ++EV + + Q VAIK + + + E
Sbjct: 8 PRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
+E+ ++ + HPNI + GG ++LI++L G L
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
+ + GT YL PE D ++DVY+ G +L E++TG V + ++E
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-- 234
Query: 258 DP 259
DP
Sbjct: 235 DP 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
+ + GT YL PE D ++DVY+ G +L E++TG V + ++E
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-- 234
Query: 258 DP 259
DP
Sbjct: 235 DP 236
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
+ + GT YL PE D ++DVY+ G +L E++TG V + ++E
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-- 234
Query: 258 DP 259
DP
Sbjct: 235 DP 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
+ + GT YL PE D ++DVY+ G +L E++TG V + ++E
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-- 234
Query: 258 DP 259
DP
Sbjct: 235 DP 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 81 PGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTD 139
P WK + + D + +++G G ++EV + + Q VAIK + + + E
Sbjct: 8 PRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS 62
Query: 140 YLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSL 179
+E+ ++ + HPNI + Y G ++LI++L G L
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMT 137
KP + A + ++ E +GQG + EV+ G VAIK L G SPE
Sbjct: 251 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 308
Query: 138 TDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L E ++ + H + ++ E ++++ E GSL L
Sbjct: 309 --FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 352
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMT 137
KP + A + ++ E +GQG + EV+ G VAIK L G SPE
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-- 225
Query: 138 TDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L E ++ + H + ++ E ++++ E GSL L
Sbjct: 226 --FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFL 269
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E +++++E GSL L
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL 103
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYL 141
L E+ + F E +G+ + +VYKG L E Q VAIK L + + ++
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 142 SELGIIVHVDHPNIAKMIGYGV-EGGMHLILELSPHGSLASLL 183
E + + HPN+ ++G + + +I HG L L
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E +++++E GSL L
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFL 103
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
+ + GT YL PE D ++DVY+ G +L E++TG V + ++E
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-- 251
Query: 258 DP 259
DP
Sbjct: 252 DP 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D + +G+G + +V + + + VA+K L G+ +S
Sbjct: 21 SKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 80
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 81 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 127
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 81 PGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTD 139
P WK + + D + +++G G ++EV + + Q VAIK + + + E
Sbjct: 8 PRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
+E+ ++ + HPNI + GG ++LI++L G L
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 117
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
IG G + VYKG+ V + +T +P+++ + +E+G++ H NI +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGYST 74
Query: 164 EGGMHLILELSPHGSLASLLY 184
+ ++ + SL L+
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH 95
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 191 KWT-HHIVSKIEGTFGYLPPEFFMHGIADE-----KTDVYAYGVLLLEIITGR 237
+W+ H ++ G+ ++ PE + D+ ++DVYA+G++L E++TG+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 95 TDNFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTT--DYLSELGIIVHV 150
+D + + ++G+G + EV K ++ GQ A+K +++ ++ T L E+ ++ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 151 DHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
DHPNI K+ + + G +L+ E+ G L
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGEL 113
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE +HG DEK DV++ GV+L +++G
Sbjct: 190 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D + +G+G + +V + + + VA+K L G+ +S
Sbjct: 20 SKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 79
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKIRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL 103
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 13 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 72
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 73 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 104 IGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP-NIA 156
+G+G + +V + + + VA+K L G+ +SEL I++H+ H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 157 KMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
++G + G + +I+E G+L++ L +K
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 74
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 75 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 95 TDNFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTT--DYLSELGIIVHV 150
+D + + ++G+G + EV K ++ GQ A+K +++ ++ T L E+ ++ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 151 DHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
DHPNI K+ + + G +L+ E+ G L
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL 113
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE +HG DEK DV++ GV+L +++G
Sbjct: 190 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 93 AATDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD 151
+++ F +G G YA VYKG G +VA+K + S E + + E+ ++ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 152 HPNIAKM 158
H NI ++
Sbjct: 62 HENIVRL 68
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 116
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 117 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 163
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 120 GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---GGMHLILELSPH 176
G+ VA+K L S D E+ I+ ++ H NI K G E G+ LI+E P
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 177 GSLASLL 183
GSL L
Sbjct: 110 GSLKEYL 116
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLS----- 142
++EL A ++ + I G Y V G +G VAIKR+ + T + LS
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 143 -----ELGIIVHVDHPNI 155
E+ ++ H HPNI
Sbjct: 74 KRVLREIRLLNHFHHPNI 91
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLS----- 142
++EL A ++ + I G Y V G +G VAIKR+ + T + LS
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 143 -----ELGIIVHVDHPNI 155
E+ ++ H HPNI
Sbjct: 74 KRVLREIRLLNHFHHPNI 91
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 22 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 81
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFL 103
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D + +G+G + +V + + + VA+K L G+ +S
Sbjct: 20 SKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 79
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Query: 80 KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
KP W++ + + +G G EV+ G VA+K L +GS M+ D
Sbjct: 1 KPWWED----AWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS---MSPD 53
Query: 140 -YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
+L+E ++ + H + ++ + +++I E +GSL L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 98
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE +G K+DV+++G+LL EI+T GR
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 22 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 81
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I+E G+L++ L +K
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 74
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFL 96
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 120 GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---GGMHLILELSPH 176
G+ VA+K L S D E+ I+ ++ H NI K G E G+ LI+E P
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 177 GSLASLL 183
GSL L
Sbjct: 98 GSLKEYL 104
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE +HG DEK DV++ GV+L +++G
Sbjct: 213 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 246
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 95 TDNFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTT--DYLSELGIIVHV 150
+D + + ++G+G + EV K ++ GQ A+K +++ ++ T L E+ ++ +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 151 DHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
DHPNI K+ + + G +L+ E+ G L
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL 136
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 72
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFL 94
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE +HG DEK DV++ GV+L +++G
Sbjct: 214 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 247
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 95 TDNFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTT--DYLSELGIIVHV 150
+D + + ++G+G + EV K ++ GQ A+K +++ ++ T L E+ ++ +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 151 DHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
DHPNI K+ + + G +L+ E+ G L
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL 137
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 70
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFL 92
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 104 IGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP-NIA 156
+G+G + +V + + + VA+K L G+ +SEL I++H+ H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 157 KMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
++G + G + +I E G+L++ L +K
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSK 117
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
L D++T + SK + PPE M+ K+D++A+GVL+ EI +
Sbjct: 171 LDDEYTSSVGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDA 264
++ PE I K+DV++YGVLL EI + G Q S ++E +
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR-MRAPE 325
Query: 265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
Y+T ++ +++L C ++ RP+ +++V+ L GD
Sbjct: 326 YSTPEIYQIML---DCWHRDPKERPRFAELVEKL-GD 358
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 93 AATDNFSHENL-----IGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYL 141
A+ F+ E L +G+G + +V + + + VA+K L G+ +
Sbjct: 19 ASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALM 78
Query: 142 SELGIIVHVDHP-NIAKMIGYGVEGG--MHLILELSPHGSLASLLYAK 186
+EL I+ H+ H N+ ++G + G + +I+E +G+L++ L +K
Sbjct: 79 TELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSK 126
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 193 THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS 252
T+H++ GT Y PE DE TD+Y+ G++L E++ G + +
Sbjct: 169 TNHVL----GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 224
Query: 253 MKELVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIE 310
+++ V D + L+ ++L A T + K +Q ++ D L+ ++
Sbjct: 225 IQDSVPNVTTDVRKDIPQSLSNVILRA------TEKDKANRYKTIQEMKDD---LSSVLH 275
Query: 311 ENQS 314
EN++
Sbjct: 276 ENRA 279
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
L D++T + SK + PPE M+ K+D++A+GVL+ EI +
Sbjct: 155 LDDEYTSSVGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
L D++T + SK + PPE M+ K+D++A+GVL+ EI +
Sbjct: 156 LDDEYTSSVGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
L D++T + SK + PPE M+ K+D++A+GVL+ EI +
Sbjct: 162 LDDEYTSSVGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE +HG DEK DV++ GV+L +++G
Sbjct: 196 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG 229
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 95 TDNFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTT--DYLSELGIIVHV 150
+D + + ++G+G + EV K ++ GQ A+K +++ ++ T L E+ ++ +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 151 DHPNIAKMIGYGVEGG-MHLILELSPHGSL 179
DHPNI K+ + + G +L+ E+ G L
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL 119
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
L D++T + SK + PPE M+ K+D++A+GVL+ EI +
Sbjct: 151 LDDEYTSSVGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I E G+L++ L +K
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK 117
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
F E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 110
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL 103
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E +++++E G L L
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFL 103
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 78
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL 100
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFL 103
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
S+ + D +G+G + +V + + + VA+K L G+ +S
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 143 ELGIIVHVDHP-NIAKMIGYGVE--GGMHLILELSPHGSLASLLYAK 186
EL I++H+ H N+ ++G + G + +I E G+L++ L +K
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK 117
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 78
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFL 100
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
GT Y+ PE + + D +AYGVLL E++ G+ D + + S M+ V
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 102 NLIGQGGYAEVYKGQL--EDGQF--VAIK--RLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
++G+G + V +G L EDG VA+K +L S E+ ++LSE + HPN+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIE-EFLSEAACMKDFSHPNV 98
Query: 156 AKMIGYGVEGGMH------LILELSPHGSLAS-LLYAK 186
+++G +E +IL +G L + LLY++
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR 136
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 89 SELQAATDNFSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDYLSELGII 147
S A +D F E+ +G+G + VY+ + + Q A+K L + +++ +E+G++
Sbjct: 46 SNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR---TEIGVL 102
Query: 148 VHVDHPNIAKMIG-YGVEGGMHLILELSPHGSL 179
+ + HPNI K+ + + L+LEL G L
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
GT YL PE + + K+D++A G +L E+ T + A ++ SMK LV +
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--------GSMKNLVLKII 238
Query: 262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRT 321
++ ++ + R +S++ + D ++ I+E+ +R+++
Sbjct: 239 SGSF-----------PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKF 287
Query: 322 FSEEFFDAEEF 332
S + AEEF
Sbjct: 288 LSPQLI-AEEF 297
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHPNIAKM 158
IG+G Y VYK Q G+ A+K++ +E + + + E+ I+ + H NI K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHPNIAKM 158
IG+G Y VYK Q G+ A+K++ +E + + + E+ I+ + H NI K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 71
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E + ++ E GSL L
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFL 93
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHPNIAKM 158
IG+G Y VYK Q G+ A+K++ +E + + + E+ I+ + H NI K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 52/185 (28%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD-YLSELGIIVHVDHPNIAKMI 159
E +G G + EV+ VA+K + GS M+ + +L+E ++ + H + K+
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-----KWLPD------------------KWTHH- 195
+ +++I E GSL L + + LP + H
Sbjct: 244 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 303
Query: 196 -----------IVSKIEGTFG-----------YLPPEFFMHGIADEKTDVYAYGVLLLEI 233
+V KI FG + PE G K+DV+++G+LL+EI
Sbjct: 304 LRAANILVSASLVCKI-ADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 362
Query: 234 IT-GR 237
+T GR
Sbjct: 363 VTYGR 367
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+G G + EV+ G VAIK L G SPE +L E I+ + H + ++
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE----SFLEEAQIMKKLKHDKLVQLYAV 72
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E GSL L
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFL 94
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE ++G K+DV+++G+LL E++T
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG 262
T Y PE DE D+++ GV+L +++G+ S +SL S+++ + G
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 263 D 263
D
Sbjct: 232 D 232
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
+GQG + EV+ G VAIK L G SPE +L E ++ + H + ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQLYAV 81
Query: 162 GVEGGMHLILELSPHGSLASLL 183
E ++++ E G L L
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFL 103
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
E + A + + +GQG + VY+G + E VAIK + + ++L+E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
++ + ++ +++G +G L I+EL G L S L
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 104
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 64
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 109
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 98 FSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
F+ IG+G + EV+KG Q VAIK + E+ D E+ ++ D P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 157 KMIG-YGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
K G Y + + +I+E GS LL L + I+ +I YL E +H
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH- 142
Query: 216 IADEKTDVYAYGVLLLE 232
D+ A VLL E
Sbjct: 143 -----RDIKAANVLLSE 154
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
GT ++ PE D K D+++ G+ +E+ G V++ K PTL
Sbjct: 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-NPPTL 239
Query: 262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
Y+ L AC+N+ + RP ++++
Sbjct: 240 EGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 90 ELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
E + A + + +GQG + VY+G + E VAIK + + ++L+E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
++ + ++ +++G +G L I+EL G L S L
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTD 139
+ E + A + + +GQG + VY+G + E VAIK + + +
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 96
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ + ++ +++G +G L I+EL G L S L
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 208 PPEFFMHGIADEKTDVYAYGVLLLEIIT 235
PPE M+ K+D++A+GVL+ EI +
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 208 PPEFFMHGIADEKTDVYAYGVLLLEIIT 235
PPE M+ K+D++A+GVL+ EI +
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 98 FSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
F+ IG+G + EV+KG Q VAIK + E+ D E+ ++ D P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 157 KMIG-YGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
K G Y + + +I+E GS LL L + I+ +I YL E +H
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH- 127
Query: 216 IADEKTDVYAYGVLLLE 232
D+ A VLL E
Sbjct: 128 -----RDIKAANVLLSE 139
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
GT ++ PE D K D+++ G+ +E+ G V++ K PTL
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-NPPTL 224
Query: 262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
Y+ L AC+N+ + RP ++++
Sbjct: 225 EGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTD 139
F E + + + + +GQG + VY+G D G+ VA+K + + +
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ ++ +++G +G L ++EL HG L S L
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 108
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 98 FSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
F+ IG+G + EV+KG Q VAIK + E+ D E+ ++ D P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 157 KMIG-YGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
K G Y + + +I+E GS LL L + I+ +I YL E +H
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH- 127
Query: 216 IADEKTDVYAYGVLLLE 232
D+ A VLL E
Sbjct: 128 -----RDIKAANVLLSE 139
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
GT ++ PE D K D+++ G+ +E+ G V++ K PTL
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-NPPTL 224
Query: 262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
Y+ L AC+N+ + RP ++++
Sbjct: 225 EGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 98 FSHENLIGQGGYAEVYKGQLEDGQ-FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
F+ IG+G + EV+KG Q VAIK + E+ D E+ ++ D P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 157 KMIG-YGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
K G Y + + +I+E GS LL L + I+ +I YL E +H
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH- 147
Query: 216 IADEKTDVYAYGVLLLE 232
D+ A VLL E
Sbjct: 148 -----RDIKAANVLLSE 159
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
GT ++ PE D K D+++ G+ +E+ G V++ K PTL
Sbjct: 186 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-NPPTL 244
Query: 262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
Y+ L AC+N+ + RP ++++
Sbjct: 245 EGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 91 LQAATDNFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTTD--YLSELGI 146
Q +D + +G G Y EV K +L G AIK + + S + L E+ +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 147 IVHVDHPNIAKMIGYGVEG-GMHLILELSPHGSL 179
+ +DHPNI K+ + + +L++E+ G L
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL 108
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTD 139
F E + + + + +GQG + VY+G D G+ VA+K + + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ ++ +++G +G L ++EL HG L S L
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTD 139
F E + + + + +GQG + VY+G D G+ VA+K + + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ ++ +++G +G L ++EL HG L S L
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 86 FALSELQAATDNFSHENLIGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTD 139
F E + + + + +GQG + VY+G D G+ VA+K + + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHL-ILELSPHGSLASLL 183
+L+E ++ ++ +++G +G L ++EL HG L S L
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
++ PE GI K+DV++YG+LL EI +
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 194 HHIVSKIEGTFGYLP-----PEFFMHGIADEKTDVYAYGVLLLEIIT 235
HHI + T G LP PE I ++DV+++GVLL EI T
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 98 FSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+++ +IG G + V++ +L + VAIK++ + + EL I+ V HPN+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN-----RELQIMRIVKHPNVVD 96
Query: 158 MIGYGVEGG-------MHLILELSPHGSL-ASLLYAK 186
+ + G ++L+LE P AS YAK
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAK 133
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD-YLSELGIIVHVDHPNIAKMI 159
E +G G + EV+ VA+K + GS M+ + +L+E ++ + H + K+
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 160 GYGVEGGMHLILELSPHGSLASLL 183
+ +++I E GSL L
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFL 100
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GR 237
PE G K+DV+++G+LL+EI+T GR
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 91 LQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTD--YLSELGII 147
LQ +++ +IG+G + EV + + Q V A+K L++ + + + E I+
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 148 VHVDHPNIAKMI-GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
+ P + ++ + + +++++E P G L +L+ +P+KW +++
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEV 183
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+GQG + VY+G D G+ VA+K + + ++L+E ++ ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 158 MIGYGVEGGMHL-ILELSPHGSLASLL 183
++G +G L ++EL HG L S L
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 192 WTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS 251
W GT Y+ PE + + D +A+GVLL E++ G+ + + + S
Sbjct: 494 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553
Query: 252 SMKELV 257
M+ V
Sbjct: 554 IMEHNV 559
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
D++ + +IG G A V + VAIKR+ + + L E+ + HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 155 IAK-MIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYL 207
I + V+ + L+++L GS+ ++ HIV+K E G L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDII----------KHIVAKGEHKSGVL 118
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+GQG + VY+G D G+ VA+K + + ++L+E ++ ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 158 MIGYGVEGGMHL-ILELSPHGSLASLL 183
++G +G L ++EL HG L S L
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE + G DEK DV++ GV+L +++G
Sbjct: 185 GTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 103 LIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEM-TTDYLSELGIIVHVDHPNIAKMI 159
++G+G + EV K + Q A+K + + S + T+ L E+ ++ +DHPNI K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+GQG + VY+G D G+ VA+K + + ++L+E ++ ++ +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 158 MIGYGVEGGMHL-ILELSPHGSLASLL 183
++G +G L ++EL HG L S L
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYL 112
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
D++ + +IG G A V + VAIKR+ + + L E+ + HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 155 IAK-MIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYL 207
I + V+ + L+++L GS+ ++ HIV+K E G L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDII----------KHIVAKGEHKSGVL 113
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 98 FSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
F+ IG+G + EV+KG Q VAIK + E+ D E+ ++ D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
K G ++G + +I+E GS LL A + ++ +I YL E +H
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIH- 143
Query: 216 IADEKTDVYAYGVLLLE 232
D+ A VLL E
Sbjct: 144 -----RDIKAANVLLSE 155
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
GT ++ PE D K D+++ G+ +E+ G V++ K +
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLV 241
Query: 262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
GD T+ + AC+N+ + RP ++++
Sbjct: 242 GDF--TKSFKEFI---DACLNKDPSFRPTAKELLK 271
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
++PPE M+ ++DV+++GV+L EI T G+Q
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLED---GQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
+GQG + VY+G D G+ VA+K + + ++L+E ++ ++ +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 158 MIGYGVEGGMHL-ILELSPHGSLASLL 183
++G +G L ++EL HG L S L
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYL 110
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 192 WTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS 251
W GT Y+ PE + + D +A+GVLL E++ G+ + + + S
Sbjct: 173 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 232
Query: 252 SMKELV 257
M+ V
Sbjct: 233 IMEHNV 238
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE + G DEK DV++ GV+L +++G
Sbjct: 185 GTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 103 LIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEM-TTDYLSELGIIVHVDHPNIAKMI 159
++G+G + EV K + Q A+K + + S + T+ L E+ ++ +DHPNI K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE + G DEK DV++ GV+L +++G
Sbjct: 185 GTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 103 LIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEM-TTDYLSELGIIVHVDHPNIAKMI 159
++G+G + EV K + Q A+K + + S + T+ L E+ ++ +DHPNI K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 203 TFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALD 241
T Y PE F H + DE+TDV++ G +L ++ G D
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD-YLSELGIIVHVDHPNIAKMI 159
E +G G + EV+ VA+K + GS M+ + +L+E ++ + H + K+
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 160 GYGVEGGMHLILELSPHGSLASLL 183
+ +++I E GSL L
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFL 273
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
+ PE G K+DV+++G+LL+EI+T
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 168 HLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYG 227
+++L+ H ++ L A +P+ T I ++ GT GY+ PE + D +A G
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 228 VLLLEIITGRQALDSSQKSL 247
LL E+I G+ +K +
Sbjct: 373 CLLYEMIAGQSPFQQRKKKI 392
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 168 HLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYG 227
+++L+ H ++ L A +P+ T I ++ GT GY+ PE + D +A G
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 228 VLLLEIITGRQALDSSQKSL 247
LL E+I G+ +K +
Sbjct: 373 CLLYEMIAGQSPFQQRKKKI 392
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 169 LILELSPHGSLASLLYAKWLPDKWTHHIVSKI-EGTFGYLPPEFFMHGIADEKTDVYAYG 227
+++E H +A AK LP +++V + + + PE I ++DV+++G
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 217
Query: 228 VLLLEIIT 235
V+L E+ T
Sbjct: 218 VVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 169 LILELSPHGSLASLLYAKWLPDKWTHHIVSKI-EGTFGYLPPEFFMHGIADEKTDVYAYG 227
+++E H +A AK LP +++V + + + PE I ++DV+++G
Sbjct: 145 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 204
Query: 228 VLLLEIIT 235
V+L E+ T
Sbjct: 205 VVLYELFT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 46/117 (39%), Gaps = 22/117 (18%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT----GRQALDSSQK 245
D +T H +K + PE + K+DV+A+GVLL EI T +D SQ
Sbjct: 183 DTYTAHAGAKF--PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ- 239
Query: 246 SLVMWSSMKELVDPTLGDAYNTEQ----LTRLLLIASACINQTSACRPQMSKVVQAL 298
V L Y EQ ++ + AC + A RP ++ QA
Sbjct: 240 -----------VYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAF 285
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 169 LILELSPHGSLASLLYAKWLPDKWTHHIVSKI-EGTFGYLPPEFFMHGIADEKTDVYAYG 227
+++E H +A AK LP +++V + + + PE I ++DV+++G
Sbjct: 146 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 205
Query: 228 VLLLEIIT 235
V+L E+ T
Sbjct: 206 VVLYELFT 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/117 (17%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTD--YLSEL 144
+ +L+ +++ +IG+G + EV + + + V A+K L++ + + + E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 145 GIIVHVDHPNIAKMI-GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
I+ + P + ++ + + +++++E P G L +L+ +P+KW +++
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 177
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSK 199
YL E I+H D ++ G + +H I++L YAK L + ++
Sbjct: 137 YLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLG---------YAKELDQG---ELCTE 183
Query: 200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT YL PE D +++G L E ITG
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSK 199
YL E I+H D ++ G + +H I++L YAK L + ++
Sbjct: 136 YLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLG---------YAKELDQG---ELCTE 182
Query: 200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT YL PE D +++G L E ITG
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJD|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3NJD|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 333
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 68/188 (36%), Gaps = 55/188 (29%)
Query: 113 YKGQLEDGQFVAIKRLTRGSPEE---------MTTDYLSELGIIVHVDHPNIAKMIGYGV 163
Y+G + G+ A+ L P+E M + ++ ++H D P + K+ GY V
Sbjct: 114 YEGTVLSGKTQALNHL----PDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCV 169
Query: 164 EGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLP--------PEFFMHG 215
GG + L +++ + GY P + H
Sbjct: 170 AGGTDIALHAD--------------------QVIAAADAKIGYPPMRVWGVPAAGLWAHR 209
Query: 216 IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL 275
+ D++ + + ITG QA + W E DP DA TE+L
Sbjct: 210 LGDQRAKRL---LFTGDCITGAQAAE--------WGLAVEAPDPADLDA-RTERLVE--R 255
Query: 276 IASACINQ 283
IA+ +NQ
Sbjct: 256 IAAMPVNQ 263
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 73 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 128
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 129 --RDLAARNVLLV 139
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 85 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 140
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 141 --RDLAARNVLLV 151
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 95 TDNFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTTD--YLSELGIIVHV 150
+D + +G G Y EV K +L G AIK + + S + L E+ ++ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 151 DHPNIAKMIGYGVEG-GMHLILELSPHGSL 179
DHPNI K+ + + +L++E+ G L
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL 91
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
GT + PE + DE DVYA+G LE T Q + ++ + V P
Sbjct: 192 GTPEFXAPEXYEEKY-DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPA- 249
Query: 262 GDAYNTEQLTRLLLIASACINQ 283
+++ + + I CI Q
Sbjct: 250 --SFDKVAIPEVKEIIEGCIRQ 269
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 150
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 151 --RDLAARNVLLV 161
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 150
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 151 --RDLAARNVLLV 161
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 134
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 135 --RDLAARNVLLV 145
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/117 (17%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTD--YLSEL 144
+ +L+ +++ +IG+G + EV + + + V A+K L++ + + + E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 145 GIIVHVDHPNIAKMI-GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
I+ + P + ++ + + +++++E P G L +L+ +P+KW +++
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/117 (17%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTD--YLSEL 144
+ +L+ +++ +IG+G + EV + + + V A+K L++ + + + E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 145 GIIVHVDHPNIAKMI-GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
I+ + P + ++ + + +++++E P G L +L+ +P+KW +++
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 75 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 130
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 131 --RDLAARNVLLV 141
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 93 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 148
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 149 --RDLAARNVLLV 159
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL 247
GT Y PE F A + D+YA +L E +TG Q S+
Sbjct: 197 GTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV 242
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 97 NFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
+F LIG GG+ +V+K + DG+ IKR+ + + E+ + +DH NI
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKALAKLDHVNI 66
Query: 156 AKMIG 160
G
Sbjct: 67 VHYNG 71
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT 260
+GT Y+ PE ++ D+YA G++L E++ D++ ++ ++ ++ D
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTDLR---DGI 235
Query: 261 LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
+ D ++ ++ T L +++ RP S++++ L
Sbjct: 236 ISDIFDKKEKTLL----QKLLSKKPEDRPNTSEILRTL 269
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKMI 159
+G G + V KG Q++ ++ + + + + L+E ++ +D+P I +MI
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 160 GYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
G L++E++ G L L + + DK +V ++ YL F+H
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH---- 134
Query: 219 EKTDVYAYGVLLL 231
D+ A VLL+
Sbjct: 135 --RDLAARNVLLV 145
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 168 HLILELSPHGSLASLLYAKWLP-DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAY 226
++++E H +A AK LP DK + + + PE I ++DV+++
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
Query: 227 GVLLLEIIT 235
GV+L E+ T
Sbjct: 201 GVVLYELFT 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 136 MTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTH 194
+ + L+E ++ +D+P I +MIG L++E++ G L L + + DK
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 472
Query: 195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLL 231
+V ++ YL F+H D+ A VLL+
Sbjct: 473 ELVHQVSMGMKYLEESNFVH------RDLAARNVLLV 503
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
++PPE ++ ++DV+++GV+L EI T G+Q
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 62/205 (30%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDG----QFVAIKRLTRGS---PEEMTTDYLSEL 144
+A F ++GQG + +V+ + G Q A+K L + + + + T E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ER 77
Query: 145 GIIVHVDHPNIAKM-IGYGVEGGMHLILELSPHGSLAS---------------------- 181
I+V V+HP I K+ + EG ++LIL+ G L +
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 182 ---------LLYAKWLPD----------KWTHHIVSK-----------IEGTFGYLPPEF 211
++Y P+ K T +SK GT Y+ PE
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 212 FMHGIADEKTDVYAYGVLLLEIITG 236
+ D +++GVL+ E++TG
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
++PPE ++ ++DV+++GV+L EI T G+Q
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
++PPE ++ ++DV+++GV+L EI T G+Q
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 136 MTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYA-KWLPDKWTH 194
+ + L+E ++ +D+P I +MIG L++E++ G L L + + DK
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 473
Query: 195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLL 231
+V ++ YL F+H D+ A VLL+
Sbjct: 474 ELVHQVSMGMKYLEESNFVH------RDLAARNVLLV 504
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 62/205 (30%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDG----QFVAIKRLTRGS---PEEMTTDYLSEL 144
+A F ++GQG + +V+ + G Q A+K L + + + + T E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ER 77
Query: 145 GIIVHVDHPNIAKM-IGYGVEGGMHLILELSPHGSLAS---------------------- 181
I+V V+HP I K+ + EG ++LIL+ G L +
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 182 ---------LLYAKWLPD----------KWTHHIVSK-----------IEGTFGYLPPEF 211
++Y P+ K T +SK GT Y+ PE
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 212 FMHGIADEKTDVYAYGVLLLEIITG 236
+ D +++GVL+ E++TG
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 62/205 (30%)
Query: 92 QAATDNFSHENLIGQGGYAEVYKGQLEDG----QFVAIKRLTRGS---PEEMTTDYLSEL 144
+A F ++GQG + +V+ + G Q A+K L + + + + T E
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ER 78
Query: 145 GIIVHVDHPNIAKM-IGYGVEGGMHLILELSPHGSLAS---------------------- 181
I+V V+HP I K+ + EG ++LIL+ G L +
Sbjct: 79 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 138
Query: 182 ---------LLYAKWLPD----------KWTHHIVSK-----------IEGTFGYLPPEF 211
++Y P+ K T +SK GT Y+ PE
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 212 FMHGIADEKTDVYAYGVLLLEIITG 236
+ D +++GVL+ E++TG
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 81 PGWKNFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEE-MTT 138
PG + + + + D + +G+G Y EVYK + VAIKR+ EE +
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 139 DYLSELGIIVHVDHPNIAKM 158
+ E+ ++ + H NI ++
Sbjct: 79 TAIREVSLLKELQHRNIIEL 98
>pdb|1FX0|B Chain B, Crystal Structure Of The Chloroplast F1-Atpase From
Spinach
pdb|1KMH|B Chain B, Crystal Structure Of Spinach Chloroplast F1-atpase
Complexed With Tentoxin
Length = 498
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 316 RRLQRTFSEEFFDAEEFNSASLNELDVNDINRHMEIVLGEDTDSLNE 362
R+++R S+ FF AE F + + + + R +++L + DSL E
Sbjct: 425 RKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDSLPE 471
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 97 NFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
+F LIG GG+ +V+K + DG+ I+R+ + + E+ + +DH NI
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-----REVKALAKLDHVNI 67
Query: 156 AKMIG 160
G
Sbjct: 68 VHYNG 72
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV 257
++ +GT Y+ PE ++ D+YA G++L E++ D++ ++ ++ ++
Sbjct: 193 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTDLR--- 246
Query: 258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
D + D ++ ++ T L +++ RP S++++ L
Sbjct: 247 DGIISDIFDKKEKTLL----QKLLSKKPEDRPNTSEILRTL 283
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
+G G + EV+ G + VA+K L G+ +L E ++ + H + ++ Y V
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS--VQAFLEEANLMKTLQHDKLVRL--YAV 75
Query: 164 ---EGGMHLILELSPHGSLASLL 183
E +++I E GSL L
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFL 98
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT GYL PE + D++A GV+L ++ G
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR 237
GT G++ PE + D D +A GV L E+I R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD 258
GT Y+ PE ++D+++ G+ L+E+ GR + S S+ ++ + +V+
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR 237
GT G++ PE + D D +A GV L E+I R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR 237
GT G++ PE + D D +A GV L E+I R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR 237
GT G++ PE + D D +A GV L E+I R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
++PPE M+ ++DV++ GV+L EI T G+Q
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM 249
D +T H +K + PE + K+DV+A+GVLL EI T S +
Sbjct: 410 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YGMSPYPGID 463
Query: 250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
S + EL++ ++ + AC + RP +++ QA
Sbjct: 464 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 512
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 368 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 371 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT GYL PE + D++A GV+L ++ G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT GYL PE + D++A GV+L ++ G
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
+G G + EV+ G + VA+K L G+ +L E ++ + H + ++ Y V
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS--VQAFLEEANLMKTLQHDKLVRL--YAV 76
Query: 164 ---EGGMHLILELSPHGSLASLL 183
E +++I E GSL L
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFL 99
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 209 PEFFMHGIADEKTDVYAYGVLLLEIIT 235
PE G K+DV+++G+LL EI+T
Sbjct: 180 PEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 97 NFSHENLIGQGGYAEVY--KGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
+F +G+GG+ V+ K +++D + AIKR+ + E + E+ + ++HP
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 155 IAKMIGYGVE 164
I + +E
Sbjct: 65 IVRYFNAWLE 74
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT GYL PE + D++A GV+L ++ G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3JVZ|C Chain C, E2~ubiquitin-Hect
pdb|3JVZ|D Chain D, E2~ubiquitin-Hect
Length = 385
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAI-------KRLTRGSPEEMTTDYLSELGIIV 148
D+ S+ IG+ V+ G+L DG F+ K++T E + ++Y + L I+
Sbjct: 115 DHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWIL 174
Query: 149 HVDHPNIAKMIGYGVEG-GMHLILELSPHGS 178
D + M E G ++L P+GS
Sbjct: 175 ENDPTELDLMFCIDEENFGQTYQVDLKPNGS 205
>pdb|3JW0|C Chain C, E2~ubiquitin-Hect
pdb|3JW0|D Chain D, E2~ubiquitin-Hect
Length = 385
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAI-------KRLTRGSPEEMTTDYLSELGIIV 148
D+ S+ IG+ V+ G+L DG F+ K++T E + ++Y + L I+
Sbjct: 115 DHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWIL 174
Query: 149 HVDHPNIAKMIGYGVEG-GMHLILELSPHGS 178
D + M E G ++L P+GS
Sbjct: 175 ENDPTELDLMFCIDEENFGQTYQVDLKPNGS 205
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT Y+ PE D ++YGVL+ E++TG
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
+G G + V G+ + VA+K + GS E ++ E ++ + HP + K YGV
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--DEFFQEAQTMMKLSHPKLVKF--YGV 71
Query: 164 ---EGGMHLILELSPHGSLASLL 183
E ++++ E +G L + L
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYL 94
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK-ELVDPT 260
GT Y+ PE + D +A GVLL E++ G ++ + + + + E+V PT
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT 245
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 169 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
GT GYL PE + D++A GV+L ++ G
Sbjct: 168 GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 169 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 88 LSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIK------RLTRGSPEEMTTDY 140
L E++ D+F +IG+G ++EV ++ + GQ A+K L RG + +
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGE----VSCF 108
Query: 141 LSELGIIVHVDHPNIAKM-IGYGVEGGMHLILELSPHGSLASLL 183
E ++V+ D I ++ + E ++L++E G L +LL
Sbjct: 109 REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL 152
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 164 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 164 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 164 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 166 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 177 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 169 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 164 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 104 IGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
+G+G YA VYKG +L D VA+K + E + E+ ++ + H NI +
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 166 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 168 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 169 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 164 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
D +T H +K + PE + K+DV+A+GVLL EI T
Sbjct: 164 DTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%)
Query: 115 GQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH--------------PNIAKMIG 160
G L+ V + L GS ++ T YL ++ HV IAK +
Sbjct: 88 GSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 147
Query: 161 YGVEGGM--------HLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFF 212
Y E GM +++L+ +A A LP + S+ + ++ E
Sbjct: 148 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 213 MHGIADEKTDVYAYGVLLLEIIT 235
G ++DV++YGV + E++T
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3V4R|A Chain A, Crystal Structure Of A Uvrb Dimer-Dna Complex
pdb|3V4R|B Chain B, Crystal Structure Of A Uvrb Dimer-Dna Complex
Length = 667
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 20/98 (20%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA---- 156
++LIG+ + ++E + V + LT+ E++T DYL E+GI V+ H I
Sbjct: 438 DDLIGE------IQARIERNERVLVTTLTKKMSEDLT-DYLKEIGIKVNYLHSEIKTLER 490
Query: 157 -------KMIGYGVEGGMHLILE--LSPHGSLASLLYA 185
++ Y V G++L+ E P SL ++L A
Sbjct: 491 IEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDA 528
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%)
Query: 115 GQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH--------------PNIAKMIG 160
G L+ V + L GS ++ T YL ++ HV IAK +
Sbjct: 70 GSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 129
Query: 161 YGVEGGM--------HLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFF 212
Y E GM +++L+ +A A LP + S+ + ++ E
Sbjct: 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 213 MHGIADEKTDVYAYGVLLLEIIT 235
G ++DV++YGV + E++T
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 104 IGQGGYAEVYKGQLEDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
+G+G Y EV QL + VA+K + + + E+ I ++H N+ K
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 160 GYGVEGGM-HLILELSPHGSL 179
G+ EG + +L LE G L
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL 92
>pdb|2D7D|A Chain A, Structural Insights Into The Cryptic Dna Dependent Atp-Ase
Activity Of Uvrb
pdb|2NMV|A Chain A, Damage Detection By The Uvrabc Pathway: Crystal Structure
Of Uvrb Bound To Fluorescein-Adducted Dna
Length = 661
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 20/98 (20%)
Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA---- 156
++LIG+ + ++E + V + LT+ E++T DYL E+GI V+ H I
Sbjct: 432 DDLIGE------IQARIERNERVLVTTLTKKMSEDLT-DYLKEIGIKVNYLHSEIKTLER 484
Query: 157 -------KMIGYGVEGGMHLILE--LSPHGSLASLLYA 185
++ Y V G++L+ E P SL ++L A
Sbjct: 485 IEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDA 522
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,955,648
Number of Sequences: 62578
Number of extensions: 409965
Number of successful extensions: 2389
Number of sequences better than 100.0: 483
Number of HSP's better than 100.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 252
Number of HSP's that attempted gapping in prelim test: 1801
Number of HSP's gapped (non-prelim): 801
length of query: 363
length of database: 14,973,337
effective HSP length: 100
effective length of query: 263
effective length of database: 8,715,537
effective search space: 2292186231
effective search space used: 2292186231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)