Query 048685
Match_columns 172
No_of_seqs 229 out of 1715
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 21:04:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 1.8E-26 6.3E-31 157.9 17.2 131 2-168 2-136 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.9 3.1E-25 1.1E-29 152.5 15.9 95 6-100 3-101 (140)
3 2fk9_A Protein kinase C, ETA t 99.9 1.2E-25 4.2E-30 157.2 13.7 121 4-160 23-155 (157)
4 2ep6_A MCTP2 protein; beta san 99.9 1.4E-25 4.9E-30 153.0 11.4 96 4-99 7-103 (133)
5 3kwu_A MUNC13-1; calcium bindi 99.9 2.2E-24 7.5E-29 149.6 16.8 94 4-97 11-116 (148)
6 1gmi_A Protein kinase C, epsil 99.9 7.2E-25 2.5E-29 150.1 13.4 120 7-164 3-135 (136)
7 3b7y_A E3 ubiquitin-protein li 99.9 2.2E-24 7.4E-29 150.4 14.3 95 6-100 16-117 (153)
8 1rlw_A Phospholipase A2, CALB 99.9 1.9E-24 6.5E-29 145.9 13.0 116 9-162 2-125 (126)
9 3m7f_B E3 ubiquitin-protein li 99.9 5.4E-24 1.8E-28 151.8 15.0 96 5-100 3-105 (176)
10 2nq3_A Itchy homolog E3 ubiqui 99.9 1.8E-23 6.1E-28 148.7 16.8 127 7-166 33-165 (173)
11 3pyc_A E3 ubiquitin-protein li 99.9 2E-22 7E-27 137.1 16.1 91 9-100 4-100 (132)
12 2b3r_A Phosphatidylinositol-4- 99.9 3.7E-22 1.3E-26 136.3 12.5 95 5-99 15-118 (134)
13 1a25_A CALB, protein kinase C 99.9 3.1E-22 1.1E-26 138.9 9.4 92 8-99 29-128 (149)
14 3rdl_A Protein kinase C alpha 99.9 6E-22 2E-26 135.4 10.6 93 8-100 14-114 (137)
15 1rsy_A Synaptotagmin I; calciu 99.9 8.5E-22 2.9E-26 137.2 11.0 95 5-99 37-138 (152)
16 3f04_A Synaptotagmin-1; C2A, c 99.9 5.5E-22 1.9E-26 136.7 9.5 97 4-100 28-131 (143)
17 2z0u_A WW domain-containing pr 99.9 4.5E-22 1.5E-26 139.1 9.1 94 5-98 38-141 (155)
18 3fbk_A RGS3, RGP3, regulator o 99.9 1.1E-21 3.7E-26 136.8 10.4 96 4-99 21-124 (153)
19 2d8k_A Synaptotagmin VII; exoc 99.9 1.5E-21 5.1E-26 134.2 10.8 97 4-100 20-124 (141)
20 2bwq_A Regulating synaptic mem 99.9 1.6E-21 5.6E-26 132.0 10.3 96 4-99 12-119 (129)
21 3fdw_A Synaptotagmin-like prot 99.9 1.4E-21 4.7E-26 135.5 10.0 97 4-100 17-123 (148)
22 2r83_A Synaptotagmin-1; C2A-C2 99.9 4.3E-21 1.5E-25 146.0 13.3 97 4-100 13-116 (284)
23 2chd_A Rabphilin-3A, exophilin 99.9 1.9E-21 6.6E-26 133.8 10.2 97 4-100 23-129 (142)
24 1ugk_A Synaptotagmin IV, KIAA1 99.9 5.7E-21 2E-25 130.8 11.4 97 4-100 16-121 (138)
25 2cm5_A Rabphilin-3A; protein t 99.9 2.4E-21 8.2E-26 136.8 9.7 95 5-99 32-135 (166)
26 3jzy_A Intersectin 2; C2 domai 99.9 2.3E-20 7.8E-25 152.5 16.5 122 7-161 384-507 (510)
27 1v27_A Regulating synaptic mem 99.9 1.5E-21 5E-26 134.1 7.8 96 4-99 15-122 (141)
28 1rh8_A Piccolo protein; beta-s 99.8 1.3E-21 4.5E-26 134.6 7.0 92 9-100 17-127 (142)
29 2q3x_A Regulating synaptic mem 99.8 6.1E-21 2.1E-25 135.4 10.5 93 8-100 28-128 (171)
30 1wfm_A Synaptotagmin XIII; C2 99.8 1E-20 3.5E-25 129.7 10.9 93 4-99 20-120 (138)
31 1tjx_A Similar to synaptotagmi 99.8 1.4E-20 4.8E-25 131.9 11.0 95 4-98 19-122 (159)
32 2enp_A B/K protein; C2 type 1, 99.8 4E-21 1.4E-25 133.0 8.0 97 4-100 20-130 (147)
33 3n5a_A Synaptotagmin-7; calciu 99.8 1.4E-20 4.9E-25 128.6 10.0 97 4-100 10-115 (138)
34 2dmg_A KIAA1228 protein; beta- 99.8 1.2E-20 4.3E-25 129.7 8.8 95 5-100 19-124 (142)
35 1w15_A Synaptotagmin IV; metal 99.8 4.1E-20 1.4E-24 128.7 11.1 93 4-96 24-125 (153)
36 2cjt_A UNC-13 homolog A, MUNC1 99.8 9.8E-20 3.3E-24 123.8 12.0 87 9-100 4-91 (131)
37 1dqv_A Synaptotagmin III; beta 99.8 8.4E-20 2.9E-24 139.9 12.3 94 4-97 14-115 (296)
38 3l9b_A Otoferlin; C2-domain, b 99.8 1.3E-18 4.5E-23 118.0 15.5 90 10-103 21-114 (144)
39 3nsj_A Perforin-1; pore formin 99.8 4.2E-19 1.4E-23 145.4 15.5 90 5-95 389-481 (540)
40 2cjs_A UNC-13 homolog A, MUNC1 99.8 1E-18 3.4E-23 123.5 9.8 90 6-100 10-100 (167)
41 1djx_A PLC-D1, phosphoinositid 99.7 1.2E-16 4.2E-21 133.2 17.3 92 8-99 495-596 (624)
42 1cjy_A CPLA2, protein (cytosol 99.7 1.5E-17 5.2E-22 140.2 11.3 93 7-100 15-115 (749)
43 2r83_A Synaptotagmin-1; C2A-C2 99.7 3.2E-17 1.1E-21 124.6 11.3 93 7-99 147-248 (284)
44 1dqv_A Synaptotagmin III; beta 99.7 2.2E-17 7.5E-22 126.5 4.5 93 7-99 149-250 (296)
45 3bxj_A RAS GTPase-activating p 99.7 9.7E-18 3.3E-22 136.3 0.5 91 6-100 7-105 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.6 5.2E-15 1.8E-19 124.7 9.9 93 8-100 170-270 (674)
47 3qr0_A Phospholipase C-beta (P 99.5 2.3E-12 8E-17 109.8 16.0 85 9-100 649-744 (816)
48 3ohm_B 1-phosphatidylinositol- 99.4 1.6E-12 5.4E-17 111.5 14.0 85 9-100 724-818 (885)
49 2zkm_X 1-phosphatidylinositol- 99.4 2.1E-12 7.1E-17 110.3 12.7 85 8-99 676-771 (799)
50 1yrk_A NPKC-delta, protein kin 99.4 1.1E-11 3.6E-16 81.8 13.2 115 8-161 4-124 (126)
51 2enj_A NPKC-theta, protein kin 99.4 5.7E-12 2E-16 84.2 11.4 121 3-162 3-130 (138)
52 2yrb_A Protein fantom; beta sa 95.7 0.27 9.4E-06 33.5 11.2 94 4-100 12-119 (156)
53 3l4c_A Dedicator of cytokinesi 95.4 0.34 1.2E-05 35.0 11.1 90 7-96 24-139 (220)
54 2wxf_A Phosphatidylinositol-4, 95.3 0.16 5.3E-06 44.5 10.5 92 6-99 213-326 (940)
55 3hhm_A Phosphatidylinositol-4, 95.0 0.31 1E-05 43.2 11.4 94 5-99 350-457 (1091)
56 1e7u_A Phosphatidylinositol 3- 94.1 0.78 2.7E-05 40.2 11.9 93 7-99 215-332 (961)
57 2y3a_A Phosphatidylinositol-4, 89.1 0.61 2.1E-05 41.5 5.6 92 6-99 349-472 (1092)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.95 E-value=1.8e-26 Score=157.89 Aligned_cols=131 Identities=23% Similarity=0.338 Sum_probs=112.9
Q ss_pred cccccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCEEEEeeeec-CCCCCeEeeEEEEEeeCCCCcEEEEEEecC
Q 048685 2 SRSVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGKQKMKTHVIN-SNCNPVWNCDLTLPIRDPNLPVHLTVYDKD 79 (172)
Q Consensus 2 ~~~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~ 79 (172)
|.+...+.|.|.|+|++|++|+..+ .+.+||||++++++..++|++++ ++.||.|||+|.|.+......|.|+|||++
T Consensus 2 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~ 81 (136)
T 1wfj_A 2 SSGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKD 81 (136)
T ss_dssp CCCCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSS
T ss_pred CCCCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECC
Confidence 3455778999999999999999998 88999999999998889999998 899999999999999977788999999999
Q ss_pred CCCCCCeeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEec--cceeeeEEEE
Q 048685 80 TFSVDDKMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLN--NVECGEVEIQ 157 (172)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~--~~~~G~l~l~ 157 (172)
.+++|++||++.++|.++..... ....|++|. +...|+|+++
T Consensus 82 ~~~~d~~lG~~~i~l~~l~~~~~------------------------------------~~~~w~~L~~~~~~~G~i~l~ 125 (136)
T 1wfj_A 82 VGTEDDAVGEATIPLEPVFVEGS------------------------------------IPPTAYNVVKDEEYKGEIWVA 125 (136)
T ss_dssp SCTTTCCSEEEEEESHHHHHHSE------------------------------------EEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCCceEEEEEEEHHHhccCCC------------------------------------CCcEEEEeecCCccCEEEEEE
Confidence 99999999999999999965421 113455543 4478999999
Q ss_pred EEEEEcCCCCc
Q 048685 158 LDWVEVPGCKG 168 (172)
Q Consensus 158 l~~~~~~~~~~ 168 (172)
++|.|...++|
T Consensus 126 l~~~p~~~~~g 136 (136)
T 1wfj_A 126 LSFKPSGPSSG 136 (136)
T ss_dssp EEEEECCSCCC
T ss_pred EEEEeCCCCCC
Confidence 99999988765
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.94 E-value=3.1e-25 Score=152.49 Aligned_cols=95 Identities=24% Similarity=0.389 Sum_probs=86.7
Q ss_pred cccceEEEEEEEEeecCCCCCCCCCCcEEEEEECCEEEEeeeecCCCCCeEeeEEEEEeeCC----CCcEEEEEEecCCC
Q 048685 6 ESMLGLLKIRVKRGINLAVRDALSSDPYVVITMGKQKMKTHVINSNCNPVWNCDLTLPIRDP----NLPVHLTVYDKDTF 81 (172)
Q Consensus 6 ~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~v~~~----~~~L~i~v~d~~~~ 81 (172)
....|.|.|+|++|++|+..+.+.+||||++++++++++|++++++.||+|||+|.|.+..+ ...|.|+|||++.+
T Consensus 3 s~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 3 SGSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp SCBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 46779999999999999988778899999999999999999999999999999999998753 46799999999999
Q ss_pred CCCCeeEEEEEeCccchhh
Q 048685 82 SVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 82 ~~d~~lG~~~i~l~~l~~~ 100 (172)
++|++||++.++|.++..+
T Consensus 83 ~~~~~lG~~~i~l~~l~~~ 101 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGD 101 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSS
T ss_pred CCCceEEEEEEEHHHhccC
Confidence 9999999999999998654
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.94 E-value=1.2e-25 Score=157.22 Aligned_cols=121 Identities=15% Similarity=0.284 Sum_probs=102.2
Q ss_pred cccccceEEEEEEEEeecCCCCC-C----------CCCCcEEEEEECCEE-EEeeeecCCCCCeEeeEEEEEeeCCCCcE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-A----------LSSDPYVVITMGKQK-MKTHVINSNCNPVWNCDLTLPIRDPNLPV 71 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~----------g~~dpyv~v~~~~~~-~~T~~~~~~~~P~w~e~f~f~v~~~~~~L 71 (172)
++....|.|+|+|++|++|++++ . +.+||||++.+++.+ .+|+++++++||.|||+|.|.+.. ...|
T Consensus 23 ~~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L 101 (157)
T 2fk9_A 23 GTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHL 101 (157)
T ss_dssp -CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEE
T ss_pred hhccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEE
Confidence 45578899999999999999887 2 578999999999765 699999999999999999999874 4689
Q ss_pred EEEEEecCCCCCCCeeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEecccee
Q 048685 72 HLTVYDKDTFSVDDKMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLNNVEC 151 (172)
Q Consensus 72 ~i~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~ 151 (172)
.|+|||++.+++|++||++.|+|.++..+... + ...+.|++|. +.
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~--------------------------------~-~~~~~W~~L~--~~ 146 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTGA--------------------------------S-DTFEGWVDLE--PE 146 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHTT--------------------------------C-SEEEEEEECB--SS
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccCC--------------------------------C-CcccEEEECC--CC
Confidence 99999999999999999999999998764100 0 1237899997 48
Q ss_pred eeEEEEEEE
Q 048685 152 GEVEIQLDW 160 (172)
Q Consensus 152 G~l~l~l~~ 160 (172)
|+|+++++|
T Consensus 147 G~i~l~l~~ 155 (157)
T 2fk9_A 147 GKVFVVITL 155 (157)
T ss_dssp CEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 999999998
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.93 E-value=1.4e-25 Score=153.00 Aligned_cols=96 Identities=28% Similarity=0.522 Sum_probs=89.9
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCEEEEeeeecCCCCCeEeeEEEEEeeCCCCcEEEEEEecCCCC
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGKQKMKTHVINSNCNPVWNCDLTLPIRDPNLPVHLTVYDKDTFS 82 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~~~~ 82 (172)
.+..+.|.|.|+|++|++|+..+ .|.+||||++.+++.+++|++++++.||.|||+|.|.+..+...|.|+|||++.++
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDK 86 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCC
Confidence 56788999999999999999998 88999999999999999999999999999999999999877788999999999998
Q ss_pred CCCeeEEEEEeCccchh
Q 048685 83 VDDKMGEANIDIKPYIA 99 (172)
Q Consensus 83 ~d~~lG~~~i~l~~l~~ 99 (172)
+|++||++.++|.++..
T Consensus 87 ~~~~lG~~~i~l~~l~~ 103 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRD 103 (133)
T ss_dssp EEEECCBCEEEGGGCCS
T ss_pred CCCeeEEEEEEHHHccC
Confidence 89999999999998854
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.93 E-value=2.2e-24 Score=149.60 Aligned_cols=94 Identities=29% Similarity=0.483 Sum_probs=85.6
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCEEEEeeeecCCCCCeEeeEEEEEeeCCCCcEEEEEEecCCC-
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGKQKMKTHVINSNCNPVWNCDLTLPIRDPNLPVHLTVYDKDTF- 81 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~~~- 81 (172)
++....|.|.|+|++|++|+.++ .|.+||||++.+++..++|++++++.||.|+|+|.|.+..+...|.|+|||++..
T Consensus 11 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 11 GTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp ----CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 45567899999999999999998 8899999999999999999999999999999999999988788899999999986
Q ss_pred ----------CCCCeeEEEEEeCccc
Q 048685 82 ----------SVDDKMGEANIDIKPY 97 (172)
Q Consensus 82 ----------~~d~~lG~~~i~l~~l 97 (172)
++|++||++.++|.++
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l 116 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTL 116 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGC
T ss_pred cccccccccCCCCccEEEEEEEHHHC
Confidence 7899999999999988
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.93 E-value=7.2e-25 Score=150.11 Aligned_cols=120 Identities=18% Similarity=0.341 Sum_probs=101.5
Q ss_pred ccceEEEEEEEEeecCCCCC-CCC-----------CCcEEEEEECCEE-EEeeeecCCCCCeEeeEEEEEeeCCCCcEEE
Q 048685 7 SMLGLLKIRVKRGINLAVRD-ALS-----------SDPYVVITMGKQK-MKTHVINSNCNPVWNCDLTLPIRDPNLPVHL 73 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~~~-~g~-----------~dpyv~v~~~~~~-~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i 73 (172)
...|.|.|+|++|++|++.+ .+. +||||++.+++.. .+|++++++.||.|||+|.|.+... ..|.|
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~ 81 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIEL 81 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEE
Confidence 45799999999999999887 433 9999999998755 6899999999999999999998765 78999
Q ss_pred EEEecCCCCCCCeeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEeccceeee
Q 048685 74 TVYDKDTFSVDDKMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLNNVECGE 153 (172)
Q Consensus 74 ~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~ 153 (172)
+|||++.+++|++||++.+++.++..+.. ...+.|++|. +.|+
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~-----------------------------------~~~~~w~~L~--~~G~ 124 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGS-----------------------------------RHFEDWIDLE--PEGK 124 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTC-----------------------------------SEEEEEEECB--SSCE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCC-----------------------------------CCccEEEEcC--CCeE
Confidence 99999999999999999999998876411 1226688776 4899
Q ss_pred EEEEEEEEEcC
Q 048685 154 VEIQLDWVEVP 164 (172)
Q Consensus 154 l~l~l~~~~~~ 164 (172)
|+++++|.+..
T Consensus 125 i~l~l~~~~~~ 135 (136)
T 1gmi_A 125 VYVIIDLSGSS 135 (136)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEecC
Confidence 99999997643
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.92 E-value=2.2e-24 Score=150.40 Aligned_cols=95 Identities=27% Similarity=0.519 Sum_probs=81.9
Q ss_pred cccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC------EEEEeeeecCCCCCeEeeEEEEEeeCCCCcEEEEEEec
Q 048685 6 ESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK------QKMKTHVINSNCNPVWNCDLTLPIRDPNLPVHLTVYDK 78 (172)
Q Consensus 6 ~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~------~~~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~d~ 78 (172)
....+.|.|+|++|++|+.++ .|.+||||++++.. ..++|++++++.||.|||+|.|.+......|.|+|||+
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 567789999999999999988 78999999999872 57899999999999999999999987777899999999
Q ss_pred CCCCCCCeeEEEEEeCccchhh
Q 048685 79 DTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
+.+++|++||++.++|.++...
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~ 117 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTE 117 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBC
T ss_pred CCCcCCCeeEEEEEEHHHcccC
Confidence 9999999999999999998764
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.92 E-value=1.9e-24 Score=145.93 Aligned_cols=116 Identities=20% Similarity=0.356 Sum_probs=100.1
Q ss_pred ceEEEEEEEEeecCCCC---C-CCCCCcEEEEEECC---EEEEeeeecCCCCCeEeeEEEEEeeCC-CCcEEEEEEecCC
Q 048685 9 LGLLKIRVKRGINLAVR---D-ALSSDPYVVITMGK---QKMKTHVINSNCNPVWNCDLTLPIRDP-NLPVHLTVYDKDT 80 (172)
Q Consensus 9 ~g~L~V~v~~a~~L~~~---~-~g~~dpyv~v~~~~---~~~~T~~~~~~~~P~w~e~f~f~v~~~-~~~L~i~v~d~~~ 80 (172)
.|.|.|+|++|++|+.+ + .|.+||||++++++ ..++|++++++.||.|||+|.|.+..+ ...|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58899999999999985 4 68999999999984 789999999999999999999999644 5679999999998
Q ss_pred CCCCCeeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEeccceeeeEEEEEEE
Q 048685 81 FSVDDKMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLNNVECGEVEIQLDW 160 (172)
Q Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~ 160 (172)
+ +|++||++.++|.++..+. ..+.|++|.....|+|+++++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~-------------------------------------~~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGE-------------------------------------KKEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTC-------------------------------------EEEEEEEETTTEEEEEEEEEEC
T ss_pred C-CCceeEEEEEEHHHccCCC-------------------------------------cEEEEEEcCCCceEEEEEEEEe
Confidence 8 4899999999999886531 2377999998888999998875
Q ss_pred EE
Q 048685 161 VE 162 (172)
Q Consensus 161 ~~ 162 (172)
.|
T Consensus 124 ~~ 125 (126)
T 1rlw_A 124 AS 125 (126)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.92 E-value=5.4e-24 Score=151.79 Aligned_cols=96 Identities=25% Similarity=0.481 Sum_probs=81.3
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC------EEEEeeeecCCCCCeEeeEEEEEeeCCCCcEEEEEEe
Q 048685 5 VESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK------QKMKTHVINSNCNPVWNCDLTLPIRDPNLPVHLTVYD 77 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~------~~~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~d 77 (172)
.....|.|.|+|++|++|+.++ .|.+||||+++++. ..++|++++++.||.|||+|.|.+......|.|+|||
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d 82 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFD 82 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEE
Confidence 3567899999999999999998 78999999999874 6789999999999999999999998777789999999
Q ss_pred cCCCCCCCeeEEEEEeCccchhh
Q 048685 78 KDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
++.+++|++||++.|+|..+...
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~ 105 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTE 105 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC
T ss_pred CCCCCCCcEEEEEEEEHHHcccc
Confidence 99999999999999999998764
No 10
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.92 E-value=1.8e-23 Score=148.74 Aligned_cols=127 Identities=27% Similarity=0.388 Sum_probs=102.6
Q ss_pred ccceEEEEEEEEeecCCCC-CCCCCCcEEEEEECCEEEEeeeecCCCCCeEeeEEEEEeeCCCCcEEEEEEecCCCCCCC
Q 048685 7 SMLGLLKIRVKRGINLAVR-DALSSDPYVVITMGKQKMKTHVINSNCNPVWNCDLTLPIRDPNLPVHLTVYDKDTFSVDD 85 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~~-~~g~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~~~~~d~ 85 (172)
...+.|.|+|++|++|+.. +.+.+||||++++++..++|+++++++||+|||+|.|.+. +...|.|+|||++.+++|+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCc
Confidence 4678899999999999944 4556999999999999999999999999999999999986 4778999999999999999
Q ss_pred eeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEecc-----ceeeeEEEEEEE
Q 048685 86 KMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLNN-----VECGEVEIQLDW 160 (172)
Q Consensus 86 ~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~-----~~~G~l~l~l~~ 160 (172)
+||++.++|.++......... ....|++|.. ...|+|.+.|++
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~--------------------------------~~~~~~~L~~~~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLE--------------------------------EVVVTLQLGGDKEPTETIGDLSICLDG 159 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEES--------------------------------SEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred eEEEEEEEHHHhcccCCCCcc--------------------------------eeEEEEECccCCCCCcccEEEEEEEee
Confidence 999999999999865322000 0133454443 368999999999
Q ss_pred EEcCCC
Q 048685 161 VEVPGC 166 (172)
Q Consensus 161 ~~~~~~ 166 (172)
+++...
T Consensus 160 l~~~~~ 165 (173)
T 2nq3_A 160 LQLESE 165 (173)
T ss_dssp EECC--
T ss_pred eecchh
Confidence 988543
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.90 E-value=2e-22 Score=137.10 Aligned_cols=91 Identities=18% Similarity=0.297 Sum_probs=81.7
Q ss_pred ceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC--EEEEeeeecCCCCCeEeeEEEEEeeCCCCcEEEEEEecCCCCC--
Q 048685 9 LGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK--QKMKTHVINSNCNPVWNCDLTLPIRDPNLPVHLTVYDKDTFSV-- 83 (172)
Q Consensus 9 ~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~--~~~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~~~~~-- 83 (172)
...|.|+|++|++|++++ .|.+||||++.++. ..++|++++++.||.|||+|.|.+..+. .|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQ 82 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSST
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCC
Confidence 467999999999999998 88999999999974 7899999999999999999999998654 59999999998876
Q ss_pred -CCeeEEEEEeCccchhh
Q 048685 84 -DDKMGEANIDIKPYIAC 100 (172)
Q Consensus 84 -d~~lG~~~i~l~~l~~~ 100 (172)
|++||++.+++..+...
T Consensus 83 ~d~~lG~~~i~l~~l~~~ 100 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAISRL 100 (132)
T ss_dssp TTTEEEEEEECHHHHHHH
T ss_pred CCCceEEEEEeHHHhhcc
Confidence 79999999999988543
No 12
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.88 E-value=3.7e-22 Score=136.33 Aligned_cols=95 Identities=22% Similarity=0.285 Sum_probs=83.4
Q ss_pred ccccceEEEEEEEEeecCCCCCCCCCCcEEEEEE-----CCEEEEeeeecCCCCCeEeeEEEEE-eeC---CCCcEEEEE
Q 048685 5 VESMLGLLKIRVKRGINLAVRDALSSDPYVVITM-----GKQKMKTHVINSNCNPVWNCDLTLP-IRD---PNLPVHLTV 75 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~-v~~---~~~~L~i~v 75 (172)
+....+.|.|+|++|++|+....+.+||||++++ ...+++|++++++.||+|||+|.|. +.. ....|.|+|
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp EEEETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 4556789999999999999733789999999998 3568899999999999999999999 653 246899999
Q ss_pred EecCCCCCCCeeEEEEEeCccchh
Q 048685 76 YDKDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 76 ~d~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
||++.++++++||++.++|.++..
T Consensus 95 ~d~d~~~~~~~lG~~~i~l~~l~~ 118 (134)
T 2b3r_A 95 LSAESLRENFFLGGITLPLKDFNL 118 (134)
T ss_dssp EECCSSSCCEEEEEEEEEGGGSCT
T ss_pred EECCCCCCCcEEEEEEEEhhhccC
Confidence 999999999999999999999855
No 13
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.87 E-value=3.1e-22 Score=138.92 Aligned_cols=92 Identities=27% Similarity=0.401 Sum_probs=83.4
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC-----CEEEEeeeecCCCCCeEeeEEEEEeeCC--CCcEEEEEEecC
Q 048685 8 MLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG-----KQKMKTHVINSNCNPVWNCDLTLPIRDP--NLPVHLTVYDKD 79 (172)
Q Consensus 8 ~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~v~~~--~~~L~i~v~d~~ 79 (172)
..+.|.|+|++|++|+..+ .+.+||||++++. ...++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 4578999999999999998 7899999999986 4688999999999999999999998764 457999999999
Q ss_pred CCCCCCeeEEEEEeCccchh
Q 048685 80 TFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~ 99 (172)
.+++|++||++.++|.++..
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~ 128 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQK 128 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTT
T ss_pred CCCCCCEEEEEEEEHHHhCc
Confidence 99899999999999998865
No 14
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.87 E-value=6e-22 Score=135.39 Aligned_cols=93 Identities=27% Similarity=0.430 Sum_probs=84.3
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCEEEEeeeecCCCCCeEeeEEEEEeeCC--CCcEEEEEEecC
Q 048685 8 MLGLLKIRVKRGINLAVRD-ALSSDPYVVITM-----GKQKMKTHVINSNCNPVWNCDLTLPIRDP--NLPVHLTVYDKD 79 (172)
Q Consensus 8 ~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~v~~~--~~~L~i~v~d~~ 79 (172)
..+.|.|+|++|++|+..+ .+.+||||++.+ +...++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 5689999999999999998 889999999999 46789999999999999999999998754 357999999999
Q ss_pred CCCCCCeeEEEEEeCccchhh
Q 048685 80 TFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~ 100 (172)
.+++|++||++.++|.++...
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~ 114 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKM 114 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHS
T ss_pred CCCCCceEEEEEEeHHHhccC
Confidence 999999999999999999764
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.87 E-value=8.5e-22 Score=137.18 Aligned_cols=95 Identities=27% Similarity=0.379 Sum_probs=84.8
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---CEEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEEEe
Q 048685 5 VESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG---KQKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTVYD 77 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v~d 77 (172)
+....+.|.|+|++|++|+..+ .+.+||||++++. ...++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 4556789999999999999998 7899999999983 5688999999999999999999988643 5679999999
Q ss_pred cCCCCCCCeeEEEEEeCccchh
Q 048685 78 KDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
++.+++|++||++.++|.++..
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~ 138 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDF 138 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCC
T ss_pred CCCCCCCcEEEEEEEEchhccC
Confidence 9999899999999999998854
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.87 E-value=5.5e-22 Score=136.69 Aligned_cols=97 Identities=27% Similarity=0.378 Sum_probs=86.1
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE---CCEEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITM---GKQKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTVY 76 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~---~~~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v~ 76 (172)
.+....+.|.|+|++|++|+..+ .+.+||||++.+ +...++|++++++.||.|||+|.|.+... ...|.|+||
T Consensus 28 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 107 (143)
T 3f04_A 28 DYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 107 (143)
T ss_dssp EEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred EEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEE
Confidence 34567789999999999999988 789999999999 45689999999999999999999998643 468999999
Q ss_pred ecCCCCCCCeeEEEEEeCccchhh
Q 048685 77 DKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 77 d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
|++.+++|++||++.++|.++..+
T Consensus 108 d~d~~~~~~~iG~~~i~l~~l~~~ 131 (143)
T 3f04_A 108 DFDRFSKHDIIGEFKVPMNTVDFG 131 (143)
T ss_dssp ECCSSSCCEEEEEEEEEGGGCCTT
T ss_pred eCCCCCCCceEEEEEEEHHHccCC
Confidence 999999999999999999998654
No 17
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.87 E-value=4.5e-22 Score=139.15 Aligned_cols=94 Identities=13% Similarity=0.138 Sum_probs=84.5
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC------EEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEE
Q 048685 5 VESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK------QKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLT 74 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~------~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~ 74 (172)
+....+.|.|+|++|+||++++ .|.+||||++++.. .+++|+++++++||+|||+|.|.+... ...|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 4456789999999999999999 88999999999853 378999999999999999999998643 4679999
Q ss_pred EEecCCCCCCCeeEEEEEeCccch
Q 048685 75 VYDKDTFSVDDKMGEANIDIKPYI 98 (172)
Q Consensus 75 v~d~~~~~~d~~lG~~~i~l~~l~ 98 (172)
|||++.++++++||++.++|.++.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSC
T ss_pred EEECCCCCCCcEEEEEEEEHHHcc
Confidence 999999999999999999999985
No 18
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.87 E-value=1.1e-21 Score=136.85 Aligned_cols=96 Identities=20% Similarity=0.380 Sum_probs=84.6
Q ss_pred cccccceEEEEEEEEeecCCCCCCCCCCcEEEEEEC-----CEEEEeeeecCCCCCeEeeEEEEEee--CCCCcEEEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRDALSSDPYVVITMG-----KQKMKTHVINSNCNPVWNCDLTLPIR--DPNLPVHLTVY 76 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~v~--~~~~~L~i~v~ 76 (172)
.+....+.|.|+|++|++|+..+.+.+||||++.+. ..+++|++++++.||.|||+|.|.+. .....|.|+||
T Consensus 21 ~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 21 SIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp EEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred EEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEE
Confidence 456778999999999999999887889999999983 35789999999999999999999984 33456999999
Q ss_pred ecCCCCC-CCeeEEEEEeCccchh
Q 048685 77 DKDTFSV-DDKMGEANIDIKPYIA 99 (172)
Q Consensus 77 d~~~~~~-d~~lG~~~i~l~~l~~ 99 (172)
|++.+++ |++||++.++|.++..
T Consensus 101 d~d~~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 101 NRASQSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp ECCSSGGGCEEEEEEEEEHHHHTC
T ss_pred eCCCCCCCCcEEEEEEEEHHHhcC
Confidence 9999876 8999999999999864
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1.5e-21 Score=134.24 Aligned_cols=97 Identities=28% Similarity=0.376 Sum_probs=85.2
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---CEEEEeeeecCCCCCeEeeEEEEEeeCC----CCcEEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG---KQKMKTHVINSNCNPVWNCDLTLPIRDP----NLPVHLTV 75 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~v~~~----~~~L~i~v 75 (172)
.+....+.|.|+|++|++|+.++ .+.+||||++++. ...++|++++++.||.|||+|.|.+... ...|.|+|
T Consensus 20 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 99 (141)
T 2d8k_A 20 GYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQV 99 (141)
T ss_dssp EECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEE
T ss_pred EEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEE
Confidence 34557789999999999999998 8899999999984 4688999999999999999999986322 46799999
Q ss_pred EecCCCCCCCeeEEEEEeCccchhh
Q 048685 76 YDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 76 ~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
||++.++++++||++.++|.++..+
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~l~~~ 124 (141)
T 2d8k_A 100 LDYDRFSRNDPIGEVSIPLNKVDLT 124 (141)
T ss_dssp EECCSSSSCEEEEEEEEETTTSCTT
T ss_pred EECCCCCCCcEEEEEEEEhhhhcCC
Confidence 9999998999999999999998654
No 20
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=1.6e-21 Score=131.97 Aligned_cols=96 Identities=19% Similarity=0.340 Sum_probs=80.2
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCEEEEeeeecCCCCCeEeeEEEEEeeCC----CCcEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITM-----GKQKMKTHVINSNCNPVWNCDLTLPIRDP----NLPVHL 73 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~v~~~----~~~L~i 73 (172)
.+....+.|.|+|++|++|+.++ .+.+||||++.+ +..+++|++++++.||.|||+|.|.+... ...|.|
T Consensus 12 ~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~ 91 (129)
T 2bwq_A 12 WFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEI 91 (129)
T ss_dssp EEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEE
T ss_pred EEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEE
Confidence 45567799999999999999998 788999999998 35789999999999999999999995322 467999
Q ss_pred EEEecCCCCC--CCeeEEEEEeCccchh
Q 048685 74 TVYDKDTFSV--DDKMGEANIDIKPYIA 99 (172)
Q Consensus 74 ~v~d~~~~~~--d~~lG~~~i~l~~l~~ 99 (172)
+|||++.+++ +++||++.++|.++..
T Consensus 92 ~V~d~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 92 TLWDQARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp EEEEC-------CEEEEEEEEEGGGCCC
T ss_pred EEEECCcCcCcCCceeEEEEEEccccCC
Confidence 9999999886 8999999999998865
No 21
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.86 E-value=1.4e-21 Score=135.53 Aligned_cols=97 Identities=25% Similarity=0.368 Sum_probs=85.8
Q ss_pred cccccceEEEEEEEEeecCCCCC--CCCCCcEEEEEEC-----CEEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD--ALSSDPYVVITMG-----KQKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHL 73 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~--~g~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i 73 (172)
.+....+.|.|+|++|++|+..+ .+.+||||++.+. ..+++|++++++.||.|||+|.|.+... ...|.|
T Consensus 17 ~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~ 96 (148)
T 3fdw_A 17 KYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQF 96 (148)
T ss_dssp EEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEE
T ss_pred EEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEE
Confidence 34566789999999999999877 6789999999986 3488999999999999999999998764 345999
Q ss_pred EEEecCCCCCCCeeEEEEEeCccchhh
Q 048685 74 TVYDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 74 ~v~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
+|||++.+++|++||++.++|.++..+
T Consensus 97 ~V~d~d~~~~~~~iG~~~i~l~~l~~~ 123 (148)
T 3fdw_A 97 SVWHHGRFGRNTFLGEAEIQMDSWKLD 123 (148)
T ss_dssp EEEEECGGGCEEEEEEEEEEHHHHHHH
T ss_pred EEEECCCCcCCcEEEEEEEEccccccc
Confidence 999999998999999999999999765
No 22
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=4.3e-21 Score=146.04 Aligned_cols=97 Identities=27% Similarity=0.366 Sum_probs=86.1
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---CEEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG---KQKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTVY 76 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v~ 76 (172)
.+....+.|.|+|++|++|+.++ .+.+||||+++++ ...++|++++++.||.|||+|.|.+... ...|.|+||
T Consensus 13 ~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~ 92 (284)
T 2r83_A 13 DYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVY 92 (284)
T ss_dssp EEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEE
T ss_pred EEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEE
Confidence 45567899999999999999998 7899999999985 3578999999999999999999998753 467999999
Q ss_pred ecCCCCCCCeeEEEEEeCccchhh
Q 048685 77 DKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 77 d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
|.+.+++|++||++.++|.++..+
T Consensus 93 d~d~~~~~~~lG~~~i~l~~l~~~ 116 (284)
T 2r83_A 93 DFDRFSKHDIIGEFKVPMNTVDFG 116 (284)
T ss_dssp ECCSSSCCCEEEEEEEEGGGCCCS
T ss_pred ECCCCCCCceeEEEEEcchhcccC
Confidence 999999999999999999998653
No 23
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.86 E-value=1.9e-21 Score=133.78 Aligned_cols=97 Identities=26% Similarity=0.410 Sum_probs=85.6
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----EEEEeeeecCCCCCeEeeEEEEE-eeCC---CCcEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK-----QKMKTHVINSNCNPVWNCDLTLP-IRDP---NLPVHL 73 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~-v~~~---~~~L~i 73 (172)
.+....+.|.|+|++|++|+..+ .|.+||||++++.. ..++|++++++.||.|||+|.|. +... ...|.|
T Consensus 23 ~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i 102 (142)
T 2chd_A 23 LYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRI 102 (142)
T ss_dssp EEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEE
T ss_pred EEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEE
Confidence 34567789999999999999998 88999999999864 78899999999999999999998 5432 367999
Q ss_pred EEEecCCCCCCCeeEEEEEeCccchhh
Q 048685 74 TVYDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 74 ~v~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
+|||++.+++|++||++.++|.++..+
T Consensus 103 ~V~d~d~~~~d~~iG~~~i~l~~l~~~ 129 (142)
T 2chd_A 103 SVCDEDKFGHNEFIGETRFSLKKLKAN 129 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEGGGCCTT
T ss_pred EEEECCCCCCCcEEEEEEEEHHHcCCC
Confidence 999999999999999999999998764
No 24
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=5.7e-21 Score=130.85 Aligned_cols=97 Identities=28% Similarity=0.421 Sum_probs=85.0
Q ss_pred cccccceEEEEEEEEeecCCCCC-C-CCCCcEEEEEEC---CEEEEeeeecCCCCCeEeeEEEEE-eeCC---CCcEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-A-LSSDPYVVITMG---KQKMKTHVINSNCNPVWNCDLTLP-IRDP---NLPVHLT 74 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~-g~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~-v~~~---~~~L~i~ 74 (172)
.+....+.|.|+|++|++|+.++ . +.+||||++++. ...++|++++++.||.|||+|.|. +... ...|.|+
T Consensus 16 ~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~ 95 (138)
T 1ugk_A 16 EYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFT 95 (138)
T ss_dssp EEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEE
T ss_pred EEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEE
Confidence 34567789999999999999998 4 789999999985 478999999999999999999996 6543 3579999
Q ss_pred EEecCCCCCCCeeEEEEEeCccchhh
Q 048685 75 VYDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 75 v~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
|||++.+++|++||++.++|.++...
T Consensus 96 V~d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 96 ILSFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp EEEECSSCCCCCCEEEEEECTTCCCT
T ss_pred EEECCCCCCCcEEEEEEEehhHccCC
Confidence 99999999999999999999998653
No 25
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.85 E-value=2.4e-21 Score=136.78 Aligned_cols=95 Identities=24% Similarity=0.346 Sum_probs=85.0
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----EEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEE
Q 048685 5 VESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK-----QKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTV 75 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v 75 (172)
+....+.|.|+|++|++|+.++ .|.+||||++++.. ..++|++++++.||.|||+|.|.+... ...|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 4456789999999999999998 88999999999874 688999999999999999999998753 45799999
Q ss_pred EecCCCCCCCeeEEEEEeCccchh
Q 048685 76 YDKDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 76 ~d~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
||++.++++++||++.+++.++..
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~~~ 135 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAKGE 135 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHH
T ss_pred EECCCCCCCcEEEeEEEecccCCc
Confidence 999999999999999999998754
No 26
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.85 E-value=2.3e-20 Score=152.53 Aligned_cols=122 Identities=31% Similarity=0.456 Sum_probs=104.7
Q ss_pred ccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCEEEEeeeecCCCCCeEeeEEEEEeeCC-CCcEEEEEEecCCCCCC
Q 048685 7 SMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGKQKMKTHVINSNCNPVWNCDLTLPIRDP-NLPVHLTVYDKDTFSVD 84 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~v~~~-~~~L~i~v~d~~~~~~d 84 (172)
...|.|.|+|++|++|++++ .|.+||||++.+++..++|++++++.||.|+|+|.|.+..+ ...|.|+|||++.+++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 45689999999999999998 88999999999999999999999999999999999999766 45699999999999999
Q ss_pred CeeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEeccceeeeEEEEEEEE
Q 048685 85 DKMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLNNVECGEVEIQLDWV 161 (172)
Q Consensus 85 ~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~~ 161 (172)
++||++.+++.++..+.... + ....|+.+.+..+|+|++++++.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~-------------------------------~--~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESK-------------------------------G--PMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHH-------------------------------C--SCCEEEECBSSSSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCC-------------------------------C--ceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999998753320 1 11568888888899999988764
No 27
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=1.5e-21 Score=134.08 Aligned_cols=96 Identities=19% Similarity=0.340 Sum_probs=83.7
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCEEEEeeeecCCCCCeEeeEEEEEeeC-C---CCcEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITM-----GKQKMKTHVINSNCNPVWNCDLTLPIRD-P---NLPVHL 73 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~v~~-~---~~~L~i 73 (172)
.+....+.|.|+|++|++|+.++ .+.+||||++++ +...++|++++++.||+|||+|.|.+.. . ...|.|
T Consensus 15 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i 94 (141)
T 1v27_A 15 WFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEI 94 (141)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEE
T ss_pred EEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEE
Confidence 34556789999999999999998 789999999998 3578899999999999999999999532 2 467999
Q ss_pred EEEecCCCCC--CCeeEEEEEeCccchh
Q 048685 74 TVYDKDTFSV--DDKMGEANIDIKPYIA 99 (172)
Q Consensus 74 ~v~d~~~~~~--d~~lG~~~i~l~~l~~ 99 (172)
+|||++.+++ +++||++.++|.++..
T Consensus 95 ~V~d~d~~~~~~~~~lG~~~i~l~~l~~ 122 (141)
T 1v27_A 95 TLWDQARVREEESEFLGEILIELETALL 122 (141)
T ss_dssp EEEEBCSSSSCCBCCCEEEEEEGGGCCC
T ss_pred EEEECCCCcCCCCceEEEEEEEccccCC
Confidence 9999999886 9999999999998854
No 28
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.85 E-value=1.3e-21 Score=134.57 Aligned_cols=92 Identities=33% Similarity=0.451 Sum_probs=81.6
Q ss_pred ceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCE--------------EEEeeeecCCCCCeEeeEEEEE-eeC---CCC
Q 048685 9 LGLLKIRVKRGINLAVRD-ALSSDPYVVITMGKQ--------------KMKTHVINSNCNPVWNCDLTLP-IRD---PNL 69 (172)
Q Consensus 9 ~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~~--------------~~~T~~~~~~~~P~w~e~f~f~-v~~---~~~ 69 (172)
.+.|.|+|++|++|+.++ .|.+||||++++... .++|++++++.||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 678999999999999999 889999999999752 4789999999999999999997 542 256
Q ss_pred cEEEEEEecCCCCCCCeeEEEEEeCccchhh
Q 048685 70 PVHLTVYDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 70 ~L~i~v~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
.|.|+|||++.++++++||++.++|.++...
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~ 127 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHL 127 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGG
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccC
Confidence 8999999999999999999999999988654
No 29
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.85 E-value=6.1e-21 Score=135.39 Aligned_cols=93 Identities=20% Similarity=0.283 Sum_probs=83.1
Q ss_pred cceEEEEEEEEeecCCCCC--CCCCCcEEEEEECC-----EEEEeeeecCCCCCeEeeEEEEEeeCCCCcEEEEEE-ecC
Q 048685 8 MLGLLKIRVKRGINLAVRD--ALSSDPYVVITMGK-----QKMKTHVINSNCNPVWNCDLTLPIRDPNLPVHLTVY-DKD 79 (172)
Q Consensus 8 ~~g~L~V~v~~a~~L~~~~--~g~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~-d~~ 79 (172)
..+.|.|+|++|++|+.++ .+.+||||++++.. ..++|++++++.||+|||+|.|.+......|.|+|| |++
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 4688999999999999988 48999999999862 378999999999999999999998766778999999 999
Q ss_pred CCCCCCeeEEEEEeCccchhh
Q 048685 80 TFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~ 100 (172)
.+++|++||++.++|.++..+
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~~ 128 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDLS 128 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCTT
T ss_pred CCCCCCEEEEEEEEHHHcccC
Confidence 999999999999999998643
No 30
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=1e-20 Score=129.69 Aligned_cols=93 Identities=17% Similarity=0.246 Sum_probs=80.2
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---C-EEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG---K-QKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTV 75 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~---~-~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v 75 (172)
.+....+.|.|+|++|++ ++ .|.+||||++.+. + ..++|+++++++||+|||+|.|.+... ...|.|+|
T Consensus 20 ~y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V 96 (138)
T 1wfm_A 20 DYDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTL 96 (138)
T ss_dssp EEETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEE
T ss_pred EEeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEE
Confidence 345567899999999993 45 7899999999983 2 468999999999999999999998754 35799999
Q ss_pred EecCCCCCCCeeEEEEEeCccchh
Q 048685 76 YDKDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 76 ~d~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
||++.+++|++||++.++|.++..
T Consensus 97 ~d~d~~~~dd~lG~~~i~l~~l~~ 120 (138)
T 1wfm_A 97 RTCDRFSRHSVAGELRLGLDGTSV 120 (138)
T ss_dssp EECCSSCTTSCSEEEEEESSSSSS
T ss_pred EECCCCCCCcEEEEEEEEcccccC
Confidence 999999999999999999999853
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.84 E-value=1.4e-20 Score=131.90 Aligned_cols=95 Identities=25% Similarity=0.332 Sum_probs=83.9
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----EEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK-----QKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLT 74 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~ 74 (172)
.+....+.|.|+|++|++|+..+ .|.+||||++++.. ..++|++++++.||.|||+|.|.+... ...|.|+
T Consensus 19 ~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~ 98 (159)
T 1tjx_A 19 RYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVT 98 (159)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred EEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEE
Confidence 34567789999999999999998 78999999999852 478999999999999999999998754 3569999
Q ss_pred EEecCCCCCCCeeEEEEEeCccch
Q 048685 75 VYDKDTFSVDDKMGEANIDIKPYI 98 (172)
Q Consensus 75 v~d~~~~~~d~~lG~~~i~l~~l~ 98 (172)
|||++.+++|++||++.|++..+.
T Consensus 99 V~d~d~~~~~~~iG~~~i~l~~~~ 122 (159)
T 1tjx_A 99 VLDYDKIGKNDAIGKVFVGYNSTG 122 (159)
T ss_dssp EEECCSSSCCEEEEEEEEETTCCH
T ss_pred EEECCCCCCCceEEEEEECCCCCC
Confidence 999999999999999999999764
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=4e-21 Score=132.98 Aligned_cols=97 Identities=25% Similarity=0.268 Sum_probs=83.8
Q ss_pred cccccceEEEEEEEEeecCCCC-C-------CCCCCcEEEEEEC---CEEEEeeeecCCCCCeEeeEEEEEeeCC---CC
Q 048685 4 SVESMLGLLKIRVKRGINLAVR-D-------ALSSDPYVVITMG---KQKMKTHVINSNCNPVWNCDLTLPIRDP---NL 69 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~-~-------~g~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~ 69 (172)
.+....+.|.|+|++|++|+.. + .+.+||||++++. ...++|++++++.||+|||+|.|.+... ..
T Consensus 20 ~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 99 (147)
T 2enp_A 20 QYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRR 99 (147)
T ss_dssp EEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHS
T ss_pred EEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccC
Confidence 3456778999999999999984 3 3589999999986 4678999999999999999999998643 35
Q ss_pred cEEEEEEecCCCCCCCeeEEEEEeCccchhh
Q 048685 70 PVHLTVYDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 70 ~L~i~v~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
.|.|+|||++.++++++||++.++|.++...
T Consensus 100 ~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~ 130 (147)
T 2enp_A 100 TLLLTVVDFDKFSRHCVIGKVSVPLCEVDLV 130 (147)
T ss_dssp EEEEEEECCSTTCCSCCCEEEEEETTTSCTT
T ss_pred EEEEEEEECCCCcCCcEEEEEEEechhcCCC
Confidence 7999999999999999999999999998553
No 33
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.84 E-value=1.4e-20 Score=128.56 Aligned_cols=97 Identities=26% Similarity=0.338 Sum_probs=85.5
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----EEEEeeeecCCCCCeEeeEEEEEeeCCC---CcEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGK-----QKMKTHVINSNCNPVWNCDLTLPIRDPN---LPVHLT 74 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~v~~~~---~~L~i~ 74 (172)
.+....+.|.|+|++|++|+..+ .|.+||||++++.. .+++|++++++.||.|||+|.|.+.... ..|.|+
T Consensus 10 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~ 89 (138)
T 3n5a_A 10 CYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIIT 89 (138)
T ss_dssp EEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEE
T ss_pred EEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEE
Confidence 45567899999999999999988 78999999999862 5789999999999999999999987553 579999
Q ss_pred EEecCCCCCCCeeEEEEEeCccchhh
Q 048685 75 VYDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 75 v~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
|||.+.+++|++||++.+++.++..+
T Consensus 90 V~d~~~~~~~~~lG~~~i~l~~~~~~ 115 (138)
T 3n5a_A 90 VMDKDKLSRNDVIGKIYLSWKSGPGE 115 (138)
T ss_dssp EEECCSSSCCEEEEEEEESSSSCHHH
T ss_pred EEECCCCCCCcEEEEEEEccccCChH
Confidence 99999999999999999999986544
No 34
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=129.70 Aligned_cols=95 Identities=22% Similarity=0.275 Sum_probs=81.9
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC-----CEEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEE
Q 048685 5 VESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG-----KQKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTV 75 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v 75 (172)
+....+.|.|+|++|++|+.++ .+ +||||++++. ..+++|++++++.||.|||+|.|.+... ...|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 4556789999999999999998 77 9999999984 2678999999999999999999998643 35799999
Q ss_pred EecCCCCC--CCeeEEEEEeCccchhh
Q 048685 76 YDKDTFSV--DDKMGEANIDIKPYIAC 100 (172)
Q Consensus 76 ~d~~~~~~--d~~lG~~~i~l~~l~~~ 100 (172)
||++.++. +++||++.++|.++...
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~ 124 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELA 124 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTT
T ss_pred EECCCccccCCcEEEEEEEeccccccc
Confidence 99998753 57999999999988654
No 35
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.83 E-value=4.1e-20 Score=128.66 Aligned_cols=93 Identities=27% Similarity=0.328 Sum_probs=78.0
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC--CE---EEEeeeecCCCCCeEeeEEEEEeeCCC---CcEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG--KQ---KMKTHVINSNCNPVWNCDLTLPIRDPN---LPVHLT 74 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~--~~---~~~T~~~~~~~~P~w~e~f~f~v~~~~---~~L~i~ 74 (172)
.+....+.|.|+|++|++|+.++ .+.+||||++++. +. +++|++++++.||.|||+|.|.+.... ..|.|+
T Consensus 24 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~ 103 (153)
T 1w15_A 24 CYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103 (153)
T ss_dssp EEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEE
T ss_pred EEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEE
Confidence 34556789999999999999998 8899999999983 32 679999999999999999999987652 469999
Q ss_pred EEecCCCCCCCeeEEEEEeCcc
Q 048685 75 VYDKDTFSVDDKMGEANIDIKP 96 (172)
Q Consensus 75 v~d~~~~~~d~~lG~~~i~l~~ 96 (172)
|||++.++++++||++.+++..
T Consensus 104 V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 104 VLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEECCTTSCCEEEEEEEESTTC
T ss_pred EEeCCCCCCCcEEEEEEECCCC
Confidence 9999999999999999999988
No 36
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.83 E-value=9.8e-20 Score=123.82 Aligned_cols=87 Identities=22% Similarity=0.361 Sum_probs=74.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCcEEEEEECCEEEEeeeec-CCCCCeEeeEEEEEeeCCCCcEEEEEEecCCCCCCCee
Q 048685 9 LGLLKIRVKRGINLAVRDALSSDPYVVITMGKQKMKTHVIN-SNCNPVWNCDLTLPIRDPNLPVHLTVYDKDTFSVDDKM 87 (172)
Q Consensus 9 ~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~~~~~d~~l 87 (172)
.+.|.|+|++|++++. .|.+||||++. . +..+|++++ ++.||.|||+|.|.+......|.|+|||++ +++|++|
T Consensus 4 ~~~L~V~V~~A~~l~~--~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~i 78 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA--QEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMV 78 (131)
T ss_dssp CEEEEEEEEEEECSSC--GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEE
T ss_pred ceEEEEEEEEeECCCC--CCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeE
Confidence 5899999999998853 57899999999 3 334555554 689999999999999877778999999999 8899999
Q ss_pred EEEEEeCccchhh
Q 048685 88 GEANIDIKPYIAC 100 (172)
Q Consensus 88 G~~~i~l~~l~~~ 100 (172)
|++.|+|.++...
T Consensus 79 G~~~i~l~~l~~~ 91 (131)
T 2cjt_A 79 GTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEGGGSCBC
T ss_pred EEEEEEHHHhhhc
Confidence 9999999998654
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.82 E-value=8.4e-20 Score=139.94 Aligned_cols=94 Identities=29% Similarity=0.450 Sum_probs=82.5
Q ss_pred cccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE---CCEEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEEE
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITM---GKQKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTVY 76 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~---~~~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v~ 76 (172)
.+....+.|.|+|++|++|+.++ .|.+||||++++ +...++|++++++.||.|+|+|.|.+... ...|.|+||
T Consensus 14 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~ 93 (296)
T 1dqv_A 14 RYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93 (296)
T ss_dssp ECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEE
T ss_pred EEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEE
Confidence 45567899999999999999998 889999999999 46788999999999999999999998644 357999999
Q ss_pred ecCCCCCCCeeEEEEEe-Cccc
Q 048685 77 DKDTFSVDDKMGEANID-IKPY 97 (172)
Q Consensus 77 d~~~~~~d~~lG~~~i~-l~~l 97 (172)
|.+.+++|++||++.++ +..+
T Consensus 94 d~d~~~~~~~iG~~~i~~l~~~ 115 (296)
T 1dqv_A 94 DFDRFSRHDLIGQVVLDNLLEL 115 (296)
T ss_dssp ECCSSSCCCEEEEEECCCTTGG
T ss_pred EcCCCCCCceEEEEEecccccc
Confidence 99999999999999985 4444
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.82 E-value=1.3e-18 Score=117.97 Aligned_cols=90 Identities=11% Similarity=0.180 Sum_probs=81.7
Q ss_pred eEEEEEEEEeecCCCCCCCCCCcEEEEEECCEEEEeeeec-CCCCCeEeeEEEEEeeCC---CCcEEEEEEecCCCCCCC
Q 048685 10 GLLKIRVKRGINLAVRDALSSDPYVVITMGKQKMKTHVIN-SNCNPVWNCDLTLPIRDP---NLPVHLTVYDKDTFSVDD 85 (172)
Q Consensus 10 g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~v~~~---~~~L~i~v~d~~~~~~d~ 85 (172)
=-|+|.|.+|.+|+ |++|||+++.+-+.+++|+++. ++.||+|||.|.|++..+ ++.|.+.|+|++.+++++
T Consensus 21 msL~V~l~~a~~Lp----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 21 MALIVHLKTVSELR----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEEESCC----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEEecCCC----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 35899999999997 6889999999999999999998 699999999999998755 567999999999999999
Q ss_pred eeEEEEEeCccchhhhcc
Q 048685 86 KMGEANIDIKPYIACLKM 103 (172)
Q Consensus 86 ~lG~~~i~l~~l~~~~~~ 103 (172)
+||++.++|.++......
T Consensus 97 lIG~~~i~Lq~lv~~~~l 114 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENRV 114 (144)
T ss_dssp EEEEEEEESHHHHHHSEE
T ss_pred EEEEEEEEhHHhccCCeE
Confidence 999999999999987443
No 39
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.81 E-value=4.2e-19 Score=145.44 Aligned_cols=90 Identities=24% Similarity=0.318 Sum_probs=82.0
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCEEEEeeeecCCCCCeEeeEEEEEeeC--CCCcEEEEEEecCCC
Q 048685 5 VESMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGKQKMKTHVINSNCNPVWNCDLTLPIRD--PNLPVHLTVYDKDTF 81 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~v~~--~~~~L~i~v~d~~~~ 81 (172)
.....+.|.|+|++|++|+. | .|.+||||++.++++.++|+++++++||+|||+|.|.+.. ....|.|+|||+|..
T Consensus 389 ~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~ 467 (540)
T 3nsj_A 389 RQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYG 467 (540)
T ss_dssp SSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSS
T ss_pred ccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCC
Confidence 34557899999999999998 8 8899999999999999999999999999999999998642 477899999999999
Q ss_pred CCCCeeEEEEEeCc
Q 048685 82 SVDDKMGEANIDIK 95 (172)
Q Consensus 82 ~~d~~lG~~~i~l~ 95 (172)
++|++||++.++|.
T Consensus 468 ~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 468 WDDDLLGSCDRSPH 481 (540)
T ss_dssp SCCEEEEEEEECCC
T ss_pred CCCCEEEEEEEEee
Confidence 89999999999987
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.78 E-value=1e-18 Score=123.46 Aligned_cols=90 Identities=21% Similarity=0.358 Sum_probs=76.8
Q ss_pred cccceEEEEEEEEeecCCCCCCCCCCcEEEEEECCEEEEeeeec-CCCCCeEeeEEEEEeeCCCCcEEEEEEecCCCCCC
Q 048685 6 ESMLGLLKIRVKRGINLAVRDALSSDPYVVITMGKQKMKTHVIN-SNCNPVWNCDLTLPIRDPNLPVHLTVYDKDTFSVD 84 (172)
Q Consensus 6 ~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~~~~~d 84 (172)
.+..+.|.|+|++|++++ ..+.+||||+++ .+..+|++++ ++.||.|||+|.|.+......|.|+|||++ +++|
T Consensus 10 ~g~~~~L~V~V~~A~~l~--~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~d 84 (167)
T 2cjs_A 10 GGILSLLCVGVKKAKFDG--AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWD 84 (167)
T ss_dssp CSCCCEEEEEEEEEECSS--CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCC
T ss_pred CCceEEEEEEEEEEECCC--CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCC
Confidence 345789999999999884 257899999999 3345666665 689999999999999877778999999999 8899
Q ss_pred CeeEEEEEeCccchhh
Q 048685 85 DKMGEANIDIKPYIAC 100 (172)
Q Consensus 85 ~~lG~~~i~l~~l~~~ 100 (172)
++||++.|+|.++...
T Consensus 85 d~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 85 TMVGTVWIPLRTIRQS 100 (167)
T ss_dssp EEEEEEEEEGGGSCBC
T ss_pred ceEEEEEEEHHHhccc
Confidence 9999999999998654
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.74 E-value=1.2e-16 Score=133.19 Aligned_cols=92 Identities=25% Similarity=0.399 Sum_probs=82.6
Q ss_pred cceEEEEEEEEeecCCCCC---CCCCCcEEEEEECC-----EEEEeeeecCC-CCCeEeeEEEEEeeCCC-CcEEEEEEe
Q 048685 8 MLGLLKIRVKRGINLAVRD---ALSSDPYVVITMGK-----QKMKTHVINSN-CNPVWNCDLTLPIRDPN-LPVHLTVYD 77 (172)
Q Consensus 8 ~~g~L~V~v~~a~~L~~~~---~g~~dpyv~v~~~~-----~~~~T~~~~~~-~~P~w~e~f~f~v~~~~-~~L~i~v~d 77 (172)
..+.|.|+|++|++|+..+ .+.+||||++.+.+ .+++|++++++ .||+|||+|.|.+..++ ..|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 5688999999999999887 57899999999842 68899999997 99999999999998764 568999999
Q ss_pred cCCCCCCCeeEEEEEeCccchh
Q 048685 78 KDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
++.++++++||++.++|..+..
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCC
T ss_pred cCCCCCCceeEEEEEEHHHcCC
Confidence 9999999999999999999854
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.73 E-value=1.5e-17 Score=140.21 Aligned_cols=93 Identities=20% Similarity=0.373 Sum_probs=84.7
Q ss_pred ccceEEEEEEEEeecCCC---CC-CCCCCcEEEEEEC---CEEEEeeeecCCCCCeEeeEEEEEeeCC-CCcEEEEEEec
Q 048685 7 SMLGLLKIRVKRGINLAV---RD-ALSSDPYVVITMG---KQKMKTHVINSNCNPVWNCDLTLPIRDP-NLPVHLTVYDK 78 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~---~~-~g~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~v~~~-~~~L~i~v~d~ 78 (172)
.+.+.|.|+|++|++|+. ++ .|.+||||+++++ ..+++|++++++.||+|||+|.|.+..+ ...|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 467899999999999998 77 7899999999998 4688999999999999999999999874 56899999999
Q ss_pred CCCCCCCeeEEEEEeCccchhh
Q 048685 79 DTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
+.++ |++||++.++|.++..+
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g 115 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVG 115 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTT
T ss_pred CCCC-CceeEEEEEEHHHcCCC
Confidence 9998 99999999999998654
No 43
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=3.2e-17 Score=124.60 Aligned_cols=93 Identities=27% Similarity=0.349 Sum_probs=81.8
Q ss_pred ccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC--C---EEEEeeeecCCCCCeEeeEEEEEeeCCC---CcEEEEEEe
Q 048685 7 SMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG--K---QKMKTHVINSNCNPVWNCDLTLPIRDPN---LPVHLTVYD 77 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~--~---~~~~T~~~~~~~~P~w~e~f~f~v~~~~---~~L~i~v~d 77 (172)
...+.|.|.|++|++|+.++ .+.+||||++++. + .+++|++++++.||.|||+|.|.+..++ ..|.|+|||
T Consensus 147 p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 147 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 34678999999999999998 7899999999984 2 4679999999999999999999987652 369999999
Q ss_pred cCCCCCCCeeEEEEEeCccchh
Q 048685 78 KDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
++.++++++||++.+++..+..
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~~~ 248 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNSTGA 248 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCCHH
T ss_pred CCCCCCCcEEEEEEECCCCCCc
Confidence 9999999999999999987644
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.67 E-value=2.2e-17 Score=126.46 Aligned_cols=93 Identities=25% Similarity=0.368 Sum_probs=82.6
Q ss_pred ccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC--C---EEEEeeeecCCCCCeEeeEEEEEeeCC---CCcEEEEEEe
Q 048685 7 SMLGLLKIRVKRGINLAVRD-ALSSDPYVVITMG--K---QKMKTHVINSNCNPVWNCDLTLPIRDP---NLPVHLTVYD 77 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~--~---~~~~T~~~~~~~~P~w~e~f~f~v~~~---~~~L~i~v~d 77 (172)
...|.|.|+|++|++|+.++ .|.+||||++++. + .+++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 149 ~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 149 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 35689999999999999998 8889999999985 2 578999999999999999999998764 3579999999
Q ss_pred cCCCCCCCeeEEEEEeCccchh
Q 048685 78 KDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
++.++++++||.+.|++..+..
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTTCH
T ss_pred CCCCCCCceEEEEEECCccCCc
Confidence 9999999999999999998744
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.65 E-value=9.7e-18 Score=136.30 Aligned_cols=91 Identities=11% Similarity=0.164 Sum_probs=10.5
Q ss_pred cccceEEEEEEEEeecCCCCCCCCCCcEEEEEECCE-EEEeeeecCC---CCCeEeeEEEEEeeCCCCcEEEEEEec-C-
Q 048685 6 ESMLGLLKIRVKRGINLAVRDALSSDPYVVITMGKQ-KMKTHVINSN---CNPVWNCDLTLPIRDPNLPVHLTVYDK-D- 79 (172)
Q Consensus 6 ~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~~-~~~T~~~~~~---~~P~w~e~f~f~v~~~~~~L~i~v~d~-~- 79 (172)
....+.|.|+|++|++|++++ ||||++++++. ..+|++++++ .||.|||+|.|.+......|.++|||. +
T Consensus 7 ~r~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 7 RRVDNVLKLWIIEARELPPKK----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDK 82 (483)
T ss_dssp EEEEECC-------------------------------------------------CCEECC------------------
T ss_pred ceeccEEEEEEEEcCCcCCCC----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCc
Confidence 345678999999999998876 99999999865 6799999999 999999999999765567899999994 4
Q ss_pred --CCCCCCeeEEEEEeCccchhh
Q 048685 80 --TFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 80 --~~~~d~~lG~~~i~l~~l~~~ 100 (172)
..++|++||.+.|++.++..+
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~ 105 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGR 105 (483)
T ss_dssp -----------------------
T ss_pred cccCCCCceEEEEEEEHHHhcCC
Confidence 367899999999999998764
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.58 E-value=5.2e-15 Score=124.72 Aligned_cols=93 Identities=28% Similarity=0.424 Sum_probs=83.6
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCEEEEeeeecCCCCCeEeeEEEEEeeCC--CCcEEEEEEecC
Q 048685 8 MLGLLKIRVKRGINLAVRD-ALSSDPYVVITM-----GKQKMKTHVINSNCNPVWNCDLTLPIRDP--NLPVHLTVYDKD 79 (172)
Q Consensus 8 ~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~v~~~--~~~L~i~v~d~~ 79 (172)
..+.|.|+|++|++|.+++ .|.+||||++.+ ...+.+|+++++++||.|||+|.|.+... ...|.++|||++
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 3578999999999999999 889999999998 34678999999999999999999998754 456999999999
Q ss_pred CCCCCCeeEEEEEeCccchhh
Q 048685 80 TFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 80 ~~~~d~~lG~~~i~l~~l~~~ 100 (172)
.+++|++||.+.+++.++...
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~ 270 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKA 270 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHC
T ss_pred cccccccccccccchhhhccC
Confidence 999999999999999998764
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.46 E-value=2.3e-12 Score=109.82 Aligned_cols=85 Identities=18% Similarity=0.332 Sum_probs=72.3
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCcEEEEEECC-------EEEEeeeecC-CCCCeEeeE-EEEE-eeCCC-CcEEEEEEe
Q 048685 9 LGLLKIRVKRGINLAVRDALSSDPYVVITMGK-------QKMKTHVINS-NCNPVWNCD-LTLP-IRDPN-LPVHLTVYD 77 (172)
Q Consensus 9 ~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~-------~~~~T~~~~~-~~~P~w~e~-f~f~-v~~~~-~~L~i~v~d 77 (172)
.+.|.|+|++|++|+.. .+||||++.+.+ .+++|+++.+ +.||+|||+ |.|. +..++ ..|.|+|||
T Consensus 649 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK---QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSS---CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC---CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 47899999999999853 689999999853 6789999986 599999998 9998 76664 468999999
Q ss_pred cCCCCCCCeeEEEEEeCccchhh
Q 048685 78 KDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
++ ++++|++.+||..+..+
T Consensus 726 ~d----ddfiG~~~ipL~~L~~G 744 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPG 744 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCE
T ss_pred cC----CCeeeEEEEEHHHcCCc
Confidence 74 78999999999988653
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.44 E-value=1.6e-12 Score=111.53 Aligned_cols=85 Identities=20% Similarity=0.391 Sum_probs=71.0
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCcEEEEEECC------EEEEeeeecC-CCCCeEee-EEEEE-eeCCC-CcEEEEEEec
Q 048685 9 LGLLKIRVKRGINLAVRDALSSDPYVVITMGK------QKMKTHVINS-NCNPVWNC-DLTLP-IRDPN-LPVHLTVYDK 78 (172)
Q Consensus 9 ~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~------~~~~T~~~~~-~~~P~w~e-~f~f~-v~~~~-~~L~i~v~d~ 78 (172)
...|.|+|++|++|+.. .+||||+|.+.+ .+++|+++.+ +.||+||| +|.|. +..++ ..|.|+|||+
T Consensus 724 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp CEEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred ceEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 35799999999999853 689999999853 3579999986 59999999 69998 76553 4689999998
Q ss_pred CCCCCCCeeEEEEEeCccchhh
Q 048685 79 DTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
+ ++++|++.+||..+..+
T Consensus 801 d----ddfiG~~~lpL~~L~~G 818 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRSG 818 (885)
T ss_dssp T----TEEEEEEEEETTTCCCE
T ss_pred C----ccEEeeEEEEHHHcCCC
Confidence 6 78999999999988653
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.41 E-value=2.1e-12 Score=110.31 Aligned_cols=85 Identities=22% Similarity=0.348 Sum_probs=71.1
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEEECC------EEEEee-eecC-CCCCeEee-EEEE-EeeCCC-CcEEEEEE
Q 048685 8 MLGLLKIRVKRGINLAVRDALSSDPYVVITMGK------QKMKTH-VINS-NCNPVWNC-DLTL-PIRDPN-LPVHLTVY 76 (172)
Q Consensus 8 ~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~~------~~~~T~-~~~~-~~~P~w~e-~f~f-~v~~~~-~~L~i~v~ 76 (172)
..+.|.|+|++|++|+. +.+||||++.+.+ ++++|+ ++++ +.||+||| +|.| .+..++ ..|.|.||
T Consensus 676 ~~~~L~V~Visa~~L~~---~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE---RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCS---SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCc---cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 46789999999999985 4689999999831 367999 7865 59999999 6999 786663 46899999
Q ss_pred ecCCCCCCCeeEEEEEeCccchh
Q 048685 77 DKDTFSVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 77 d~~~~~~d~~lG~~~i~l~~l~~ 99 (172)
|++ ++++|++.+||..+..
T Consensus 753 D~d----~d~iG~~~ipl~~L~~ 771 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNS 771 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCC
T ss_pred EeC----CCccceEeeehhhcCC
Confidence 986 7899999999998854
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.41 E-value=1.1e-11 Score=81.85 Aligned_cols=115 Identities=16% Similarity=0.254 Sum_probs=86.6
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCEE----EEe-eeecCCCCCeEeeEEEEEeeCCCCcEEEEEEecCCC
Q 048685 8 MLGLLKIRVKRGINLAVRD-ALSSDPYVVITMGKQK----MKT-HVINSNCNPVWNCDLTLPIRDPNLPVHLTVYDKDTF 81 (172)
Q Consensus 8 ~~g~L~V~v~~a~~L~~~~-~g~~dpyv~v~~~~~~----~~T-~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v~d~~~~ 81 (172)
....|+|.+.++.--+.+. ....||||.+.+.... .+| ...++|..|.|+++|.-.+. ....|.|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE- 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT-
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC-
Confidence 4567888887765322222 2468999999987432 244 66778999999999999887 46889999997653
Q ss_pred CCCCeeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEeccceeeeEEEEEEEE
Q 048685 82 SVDDKMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLNNVECGEVEIQLDWV 161 (172)
Q Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~~ 161 (172)
++++.++|++.++...-.. .+| ..+.|++|+ +.|+|++.++|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~------------------------------~~g--~~e~WvdLe--P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKK------------------------------NNG--KAEFWLDLQ--PQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHT------------------------------TTT--EEEEEEECB--SSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhcc------------------------------CCC--ceEEEEecc--cCcEEEEEEEEe
Confidence 8999999999999864211 013 338999998 799999999987
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.40 E-value=5.7e-12 Score=84.18 Aligned_cols=121 Identities=15% Similarity=0.252 Sum_probs=91.4
Q ss_pred ccccccceEEEEEEEEeecCCCCC--CCCCCcEEEEEECCE-E---EEe-eeecCCCCCeEeeEEEEEeeCCCCcEEEEE
Q 048685 3 RSVESMLGLLKIRVKRGINLAVRD--ALSSDPYVVITMGKQ-K---MKT-HVINSNCNPVWNCDLTLPIRDPNLPVHLTV 75 (172)
Q Consensus 3 ~~~~~~~g~L~V~v~~a~~L~~~~--~g~~dpyv~v~~~~~-~---~~T-~~~~~~~~P~w~e~f~f~v~~~~~~L~i~v 75 (172)
.+..+..+.|+|.+.+..--+.+. ....||||.+.+... . .+| ...++|..|.|+++|.-.+. ....|.|.|
T Consensus 3 ~~~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~V 81 (138)
T 2enj_A 3 SGSSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIV 81 (138)
T ss_dssp CCCSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEE
T ss_pred CcccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEE
Confidence 345567778999998876544332 346899999998743 2 466 66667899999999998887 468899999
Q ss_pred EecCCCCCCCeeEEEEEeCccchhhhccCCccCCCceEEEEEeeCCcceeccCCceEecCCeeeEeEeEEeccceeeeEE
Q 048685 76 YDKDTFSVDDKMGEANIDIKPYIACLKMGLENLPNGCAIKKIQPTRINCLLDESSIIWNNGKITQDMSLRLNNVECGEVE 155 (172)
Q Consensus 76 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~ 155 (172)
|+... ++++.++|++.+|...-.. .+| ..+.|++|+ +.|+|+
T Consensus 82 fh~a~----~fVAn~tV~~edL~~~ck~------------------------------~~g--~~e~WvdLe--P~Gkl~ 123 (138)
T 2enj_A 82 KGKNV----DLISETTVELYSLAERCRK------------------------------NNG--KTEIWLELK--PQGRML 123 (138)
T ss_dssp ECSSC----SCCEEEEEESHHHHHHHHH------------------------------TTT--CEEEEEECB--SSCEEE
T ss_pred EcCCC----CeeeEEEEEHHHHHhhhcc------------------------------CCC--ceEEEEecc--cCcEEE
Confidence 97653 8999999999999864211 013 238899998 799999
Q ss_pred EEEEEEE
Q 048685 156 IQLDWVE 162 (172)
Q Consensus 156 l~l~~~~ 162 (172)
+.++|.-
T Consensus 124 v~i~~~~ 130 (138)
T 2enj_A 124 MNARYFL 130 (138)
T ss_dssp EEEEECC
T ss_pred EEEEEEE
Confidence 9999963
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=95.74 E-value=0.27 Score=33.51 Aligned_cols=94 Identities=11% Similarity=0.132 Sum_probs=65.6
Q ss_pred cccccceEEEEEEEEeecCCCCC---CCCCCcE--EEEEECC-EEEEeeeecCCCCCeEeeEEEEEeeCC--------CC
Q 048685 4 SVESMLGLLKIRVKRGINLAVRD---ALSSDPY--VVITMGK-QKMKTHVINSNCNPVWNCDLTLPIRDP--------NL 69 (172)
Q Consensus 4 ~~~~~~g~L~V~v~~a~~L~~~~---~g~~dpy--v~v~~~~-~~~~T~~~~~~~~P~w~e~f~f~v~~~--------~~ 69 (172)
.+....+.+.|+|.++.- .+.. .+..+|. |.+.+-. +.+.|.++. +.+|.+|.+-.|.+... ..
T Consensus 12 ~l~~gEnlfEihi~~~~~-~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 12 HLERGENLFEIHINKVTF-SSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKN 89 (156)
T ss_dssp SCCSSCEEEEEEEEEECC-CHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHC
T ss_pred hccCCCcEEEEEEeEEEE-cHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcC
Confidence 346778899999999873 2221 3344564 4444444 455565554 88999999988888533 24
Q ss_pred cEEEEEEecCCCCCCCeeEEEEEeCccchhh
Q 048685 70 PVHLTVYDKDTFSVDDKMGEANIDIKPYIAC 100 (172)
Q Consensus 70 ~L~i~v~d~~~~~~d~~lG~~~i~l~~l~~~ 100 (172)
.+.+++...... ..+.+|.+.|+|..++..
T Consensus 90 ~l~lELhqa~g~-~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 90 TITLEVHQAYST-EYETIAACQLKFHEILEK 119 (156)
T ss_dssp CEEEEEEEECSS-CEEEEEEEEECCSHHHHC
T ss_pred CEEEEEEEeeCC-CceEEEEEEEEhHHhhCc
Confidence 688888886533 557899999999999864
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=95.45 E-value=0.34 Score=34.97 Aligned_cols=90 Identities=9% Similarity=0.078 Sum_probs=57.9
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCcEEEEEEC-------------------CEEEEeeeecCCCCCeEeeEEEEEeeCC
Q 048685 7 SMLGLLKIRVKRGINLAVRDALSSDPYVVITMG-------------------KQKMKTHVINSNCNPVWNCDLTLPIRDP 67 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~~-------------------~~~~~T~~~~~~~~P~w~e~f~f~v~~~ 67 (172)
+....|.|++.+|.--........|.-|++++- -..++|.+...+.+|.|+|++.+.+...
T Consensus 24 d~RNdLYVtl~~g~F~~~~k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YHnk~P~w~EtIKi~LP~~ 103 (220)
T 3l4c_A 24 DVRNDIYVTLVQGDFDKGSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAIPIE 103 (220)
T ss_dssp --CEEEEEEEEEEECCCSSSSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTTCSSCCCCEEEEEEECTT
T ss_pred CCcccEEEEeeEeEECCCCCCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEcCCCCCceEeEEEeeChh
Confidence 456778888888853221112233444444431 1346788888889999999999998865
Q ss_pred ---CCcEEEEEEecCCC----CCCCeeEEEEEeCcc
Q 048685 68 ---NLPVHLTVYDKDTF----SVDDKMGEANIDIKP 96 (172)
Q Consensus 68 ---~~~L~i~v~d~~~~----~~d~~lG~~~i~l~~ 96 (172)
..-|.+++++.... ..+..+|.+.+||-.
T Consensus 104 ~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 104 DVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred hcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 33488999875532 123478999999753
No 54
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=95.27 E-value=0.16 Score=44.47 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=62.8
Q ss_pred cccceEEEEEEEEeecCCCCCCCCCCcEEEEEE--CC----EEEEeeeecCCCCCeEeeEEEEEeeC---C-CCcEEEEE
Q 048685 6 ESMLGLLKIRVKRGINLAVRDALSSDPYVVITM--GK----QKMKTHVINSNCNPVWNCDLTLPIRD---P-NLPVHLTV 75 (172)
Q Consensus 6 ~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~--~~----~~~~T~~~~~~~~P~w~e~f~f~v~~---~-~~~L~i~v 75 (172)
-+....+.|+|.++.++... ...+-||.+.+ |+ ....|..+.-..+|.|||.+.|.+.- | +..|.++|
T Consensus 213 ~~~~~~f~i~i~~~~~~~~~--~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 213 WSLEQPFSIELIEGRKVNAD--ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp TTCCSEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred hhcCCceEEEEEEecccCCC--CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 35567899999999998654 24577877665 43 23455555556789999999998753 2 56799999
Q ss_pred EecCCC--C----------CCCeeEEEEEeCccchh
Q 048685 76 YDKDTF--S----------VDDKMGEANIDIKPYIA 99 (172)
Q Consensus 76 ~d~~~~--~----------~d~~lG~~~i~l~~l~~ 99 (172)
|+.... + .+..+|.+.++|-+...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~ 326 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKD 326 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCTTS
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECCcC
Confidence 995321 1 23489999999877543
No 55
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=94.96 E-value=0.31 Score=43.20 Aligned_cols=94 Identities=19% Similarity=0.220 Sum_probs=63.4
Q ss_pred ccccceEEEEEEEEeecCCCCCCCCCCcEEEEEE--CC----EEEEeeeecCCCCCeEeeEEEEEeeC---C-CCcEEEE
Q 048685 5 VESMLGLLKIRVKRGINLAVRDALSSDPYVVITM--GK----QKMKTHVINSNCNPVWNCDLTLPIRD---P-NLPVHLT 74 (172)
Q Consensus 5 ~~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~--~~----~~~~T~~~~~~~~P~w~e~f~f~v~~---~-~~~L~i~ 74 (172)
+-+....+.|+|..+.++........+.||.+.+ |+ ....|+.+. ..+|.|||..+|.+.- | +..|.++
T Consensus 350 lw~~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 350 LWVINSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLS 428 (1091)
T ss_dssp GGGCCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred hhhCCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEE
Confidence 3355678999999998876433334677888776 33 334454433 4578899999998753 2 5679999
Q ss_pred EEecCCC----CCCCeeEEEEEeCccchh
Q 048685 75 VYDKDTF----SVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 75 v~d~~~~----~~d~~lG~~~i~l~~l~~ 99 (172)
||+.... ..+..+|.+.++|-+...
T Consensus 429 l~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 457 (1091)
T 3hhm_A 429 ICSVKGRKGAKEEHCPLAWGNINLFDYTD 457 (1091)
T ss_dssp ECCCCCCC-------CCEEEEEESBCTTC
T ss_pred EEEecCccCcccccceeEEeeeeeEccCC
Confidence 9986542 134579999999987654
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=94.09 E-value=0.78 Score=40.24 Aligned_cols=93 Identities=13% Similarity=0.104 Sum_probs=59.2
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCcEEEEEE--CCEE---EEeeeecCCCCCeEeeEEEEEeeC---C-CCcEEEEEEe
Q 048685 7 SMLGLLKIRVKRGINLAVRDALSSDPYVVITM--GKQK---MKTHVINSNCNPVWNCDLTLPIRD---P-NLPVHLTVYD 77 (172)
Q Consensus 7 ~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~~--~~~~---~~T~~~~~~~~P~w~e~f~f~v~~---~-~~~L~i~v~d 77 (172)
+....+.|.|..+...........+.||.+.+ |++. .+|..+.-+.+|.|||.+.|.+.- | +..|.++||+
T Consensus 215 ~~~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 294 (961)
T 1e7u_A 215 DCDRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYC 294 (961)
T ss_dssp CCCSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred eccCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEe
Confidence 44567889999886522112234577877654 5432 345444456689999999998753 2 5679999997
Q ss_pred cCCC----------------CCCCeeEEEEEeCccchh
Q 048685 78 KDTF----------------SVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 78 ~~~~----------------~~d~~lG~~~i~l~~l~~ 99 (172)
.... +++..+|.+.++|-+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 295 GAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp EEC--------------------CEEEEEEEESBCTTS
T ss_pred cccCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 4321 134579999999877654
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=89.09 E-value=0.61 Score=41.46 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=58.9
Q ss_pred cccceEEEEEEEEeecCCCCCCCCCCcEEEEE--ECCEE----EEeeeecCCCCCeEeeEEEEEeeCC----CCcEEEEE
Q 048685 6 ESMLGLLKIRVKRGINLAVRDALSSDPYVVIT--MGKQK----MKTHVINSNCNPVWNCDLTLPIRDP----NLPVHLTV 75 (172)
Q Consensus 6 ~~~~g~L~V~v~~a~~L~~~~~g~~dpyv~v~--~~~~~----~~T~~~~~~~~P~w~e~f~f~v~~~----~~~L~i~v 75 (172)
-+....+.|+|..+.++...+ ..+-||.+. .|++. ..|..+.-+.+|.|||.+.|.+.-. +..|.+++
T Consensus 349 ~~~~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 349 WDNNNPFQITLVKGNKLNTEE--TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp CCCCSEEEEEECCCCCCCCCS--SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred hhcCCCEEEEEEEeccCCCCC--CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 355677899999998886542 455666644 45433 3455544467899999999987643 55699999
Q ss_pred EecCCC----------------------CCCCeeEEEEEeCccchh
Q 048685 76 YDKDTF----------------------SVDDKMGEANIDIKPYIA 99 (172)
Q Consensus 76 ~d~~~~----------------------~~d~~lG~~~i~l~~l~~ 99 (172)
|+.... ..+..+|.+.++|-+...
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~ 472 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKG 472 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCTTC
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECCcC
Confidence 985311 112378888888876543
Done!