Query 048693
Match_columns 539
No_of_seqs 471 out of 2382
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 21:10:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 100.0 7.7E-46 2.6E-50 400.0 30.3 273 2-274 130-402 (554)
2 3d2f_A Heat shock protein homo 100.0 8.4E-46 2.9E-50 406.3 27.9 270 2-274 129-403 (675)
3 4b9q_A Chaperone protein DNAK; 100.0 2.8E-45 9.5E-50 399.3 31.1 267 2-274 126-400 (605)
4 2kho_A Heat shock protein 70; 100.0 7.1E-45 2.4E-49 396.1 20.9 267 2-274 126-400 (605)
5 3i33_A Heat shock-related 70 k 100.0 7.6E-43 2.6E-47 364.2 31.3 253 2-254 149-403 (404)
6 2v7y_A Chaperone protein DNAK; 100.0 2E-43 6.9E-48 378.1 27.2 266 2-274 100-369 (509)
7 4gni_A Putative heat shock pro 100.0 2.7E-42 9.3E-47 360.5 29.0 252 2-253 141-402 (409)
8 3qfu_A 78 kDa glucose-regulate 100.0 1.4E-41 4.8E-46 353.4 31.8 251 2-253 144-394 (394)
9 1dkg_D Molecular chaperone DNA 100.0 7.4E-40 2.5E-44 339.2 27.7 249 2-252 126-382 (383)
10 1jce_A ROD shape-determining p 100.0 3.8E-32 1.3E-36 277.1 16.9 222 11-253 95-327 (344)
11 3h1q_A Ethanolamine utilizatio 99.9 4.1E-24 1.4E-28 210.3 14.8 189 3-249 84-272 (272)
12 4a2a_A Cell division protein F 99.9 6.6E-23 2.2E-27 212.9 13.2 200 25-253 168-395 (419)
13 2ych_A Competence protein PILM 99.9 3.1E-23 1E-27 213.9 8.7 212 2-239 110-341 (377)
14 2fsj_A Hypothetical protein TA 99.9 5.9E-23 2E-27 208.7 10.2 202 12-250 120-343 (346)
15 2fxu_A Alpha-actin-1, actin, a 99.8 2E-20 6.9E-25 192.4 11.9 219 12-250 101-348 (375)
16 1k8k_A ARP3, actin-like protei 99.8 5.2E-20 1.8E-24 192.3 13.6 225 11-251 107-387 (418)
17 2zgy_A Plasmid segregation pro 99.8 6.5E-19 2.2E-23 177.3 7.8 203 13-249 97-319 (320)
18 3js6_A Uncharacterized PARM pr 99.6 3E-16 1E-20 159.3 7.1 205 12-254 114-339 (355)
19 1k8k_B ARP2, actin-like protei 99.6 1.2E-15 4.1E-20 157.6 4.2 214 13-251 106-364 (394)
20 4apw_A ALP12; actin-like prote 99.5 6.3E-15 2.2E-19 148.3 7.0 206 12-254 106-327 (329)
21 1v5n_A PDI-like hypothetical p 99.5 2.9E-15 9.8E-20 119.1 1.9 67 331-410 15-81 (89)
22 4ehu_A Activator of 2-hydroxyi 99.5 6.6E-13 2.2E-17 130.4 15.3 195 25-254 38-257 (276)
23 1v5n_A PDI-like hypothetical p 99.4 1.2E-13 4.1E-18 109.7 3.5 59 286-345 23-81 (89)
24 2d0o_A DIOL dehydratase-reacti 99.4 2.6E-13 9E-18 139.1 5.8 197 26-252 369-605 (610)
25 1nbw_A Glycerol dehydratase re 99.4 3.1E-13 1E-17 139.2 5.2 193 28-250 373-605 (607)
26 3dwl_A Actin-related protein 3 99.3 2.3E-12 7.8E-17 133.8 6.8 223 12-250 124-395 (427)
27 3qb0_A Actin-related protein 4 99.0 5.4E-10 1.9E-14 117.2 9.2 92 13-114 116-208 (498)
28 4fo0_A Actin-related protein 8 98.9 2.7E-08 9.1E-13 108.2 16.7 101 5-115 187-293 (593)
29 1hux_A Activator of (R)-2-hydr 98.4 1.8E-06 6.2E-11 83.8 12.6 74 175-253 185-258 (270)
30 4am6_A Actin-like protein ARP8 98.1 4.7E-06 1.6E-10 88.6 9.2 95 12-115 222-317 (655)
31 2ews_A Pantothenate kinase; PA 98.0 8E-05 2.7E-09 72.3 13.6 47 203-249 237-286 (287)
32 3pfq_A PKC-B, PKC-beta, protei 97.9 4.5E-06 1.5E-10 91.9 4.3 100 300-409 37-150 (674)
33 2i7n_A Pantothenate kinase 1; 97.8 0.00024 8.2E-09 70.8 13.6 71 174-249 278-358 (360)
34 2fc7_A ZZZ3 protein; structure 97.4 0.00015 5.2E-09 56.0 4.5 52 311-365 21-77 (82)
35 2dip_A Zinc finger SWIM domain 97.3 0.0001 3.6E-09 58.9 2.9 46 311-364 31-78 (98)
36 2enz_A NPKC-theta, protein kin 97.1 0.00043 1.5E-08 51.1 4.3 43 300-342 12-57 (65)
37 2e5r_A Dystrobrevin alpha; ZZ 97.1 0.00031 1E-08 51.3 3.3 47 312-361 12-60 (63)
38 1ptq_A Protein kinase C delta 97.0 0.00035 1.2E-08 48.6 3.0 42 301-342 1-45 (50)
39 2row_A RHO-associated protein 97.0 0.00026 8.8E-09 54.7 2.4 47 295-341 19-70 (84)
40 1tot_A CREB-binding protein; z 97.0 8.2E-05 2.8E-09 52.1 -0.4 43 311-363 6-49 (52)
41 3uej_A NPKC-delta, protein kin 97.0 0.00029 1E-08 52.0 2.4 45 298-342 7-54 (65)
42 3l0q_A Xylulose kinase; xlylul 96.9 0.0017 5.7E-08 69.6 8.7 86 168-255 408-493 (554)
43 2yuu_A NPKC-delta, protein kin 96.9 0.00078 2.7E-08 52.4 4.4 44 299-342 16-62 (83)
44 2enn_A NPKC-theta, protein kin 96.9 0.00049 1.7E-08 52.7 3.1 45 298-342 21-68 (77)
45 1y8f_A UNC-13 homolog A, MUNC1 96.9 0.00058 2E-08 50.6 3.0 43 300-342 13-58 (66)
46 2eli_A Protein kinase C alpha 96.8 0.00098 3.4E-08 52.0 4.2 43 300-342 17-62 (85)
47 3pfq_A PKC-B, PKC-beta, protei 96.8 0.00045 1.5E-08 75.9 3.1 87 377-468 49-150 (674)
48 3ll3_A Gluconate kinase; xylul 96.7 0.003 1E-07 66.7 8.2 52 202-255 393-444 (504)
49 2itm_A Xylulose kinase, xylulo 96.7 0.0027 9.3E-08 66.7 7.8 82 170-255 357-438 (484)
50 2zf5_O Glycerol kinase; hypert 96.7 0.0034 1.1E-07 66.3 8.4 80 170-255 365-444 (497)
51 2db6_A SH3 and cysteine rich d 96.7 0.00043 1.5E-08 52.6 1.1 44 299-342 16-62 (74)
52 4bc3_A Xylulose kinase; transf 96.7 0.0035 1.2E-07 66.8 8.5 79 175-255 407-485 (538)
53 1faq_A RAF-1; transferase, ser 96.6 0.0013 4.5E-08 46.1 3.1 42 300-342 3-44 (52)
54 2fnf_X Putative RAS effector N 96.6 0.0018 6.2E-08 48.7 3.9 43 300-342 23-66 (72)
55 3hz6_A Xylulokinase; xylulose, 96.6 0.004 1.4E-07 65.9 8.0 79 170-255 375-454 (511)
56 3i8b_A Xylulose kinase; strain 96.6 0.0026 9.1E-08 67.3 6.6 52 202-255 424-475 (515)
57 1kbe_A Kinase suppressor of RA 96.5 0.0022 7.4E-08 44.1 3.4 40 301-342 5-44 (49)
58 3g25_A Glycerol kinase; IDP007 96.5 0.0039 1.3E-07 65.8 7.2 52 202-255 404-455 (501)
59 3ezw_A Glycerol kinase; glycer 96.4 0.0071 2.4E-07 64.2 8.4 52 202-255 402-453 (526)
60 3jvp_A Ribulokinase; PSI-II, N 96.3 0.004 1.4E-07 66.9 6.5 80 170-254 410-490 (572)
61 4e1j_A Glycerol kinase; struct 96.3 0.0033 1.1E-07 66.7 5.7 52 202-255 425-476 (520)
62 2p3r_A Glycerol kinase; glycer 96.3 0.0043 1.5E-07 65.7 6.4 52 202-255 401-452 (510)
63 3h3n_X Glycerol kinase; ATP-bi 96.3 0.0047 1.6E-07 65.3 6.7 52 202-255 403-454 (506)
64 2dpn_A Glycerol kinase; thermu 96.3 0.0085 2.9E-07 63.1 8.4 53 201-255 397-449 (495)
65 3ifr_A Carbohydrate kinase, FG 96.2 0.0047 1.6E-07 65.3 6.2 52 202-255 400-451 (508)
66 1rfh_A RAS association (ralgds 96.2 0.0023 7.9E-08 46.1 2.4 43 300-342 10-53 (59)
67 2d4w_A Glycerol kinase; alpha 96.1 0.0067 2.3E-07 64.1 6.6 52 202-255 403-454 (504)
68 1kbe_A Kinase suppressor of RA 96.0 0.0083 2.8E-07 41.2 4.3 30 377-407 15-44 (49)
69 3eno_A Putative O-sialoglycopr 95.9 0.24 8.1E-06 49.1 16.7 69 182-255 234-307 (334)
70 2w40_A Glycerol kinase, putati 95.9 0.008 2.8E-07 63.4 6.3 52 202-255 406-458 (503)
71 2enz_A NPKC-theta, protein kin 95.9 0.0088 3E-07 43.9 4.4 31 377-407 24-57 (65)
72 3mdq_A Exopolyphosphatase; str 95.8 0.23 7.9E-06 48.7 15.6 78 27-109 92-170 (315)
73 2ivn_A O-sialoglycoprotein end 95.7 0.97 3.3E-05 44.5 19.8 210 10-254 68-301 (330)
74 2eli_A Protein kinase C alpha 95.6 0.018 6E-07 44.8 5.4 44 354-407 16-62 (85)
75 2db6_A SH3 and cysteine rich d 95.5 0.008 2.7E-07 45.4 3.1 44 353-406 15-61 (74)
76 1t6c_A Exopolyphosphatase; alp 95.5 0.015 5.1E-07 57.3 5.9 78 27-109 100-177 (315)
77 2e5r_A Dystrobrevin alpha; ZZ 95.5 0.006 2E-07 44.4 2.2 44 377-420 12-59 (63)
78 2yuu_A NPKC-delta, protein kin 95.4 0.011 3.6E-07 45.9 3.6 31 377-407 29-62 (83)
79 2dip_A Zinc finger SWIM domain 95.4 0.0048 1.6E-07 49.2 1.4 41 377-420 32-74 (98)
80 2fc7_A ZZZ3 protein; structure 95.4 0.013 4.5E-07 45.1 3.8 48 376-423 21-75 (82)
81 2uyt_A Rhamnulokinase; rhamnos 95.3 0.021 7.1E-07 60.0 6.4 50 202-254 393-442 (489)
82 1ptq_A Protein kinase C delta 95.2 0.01 3.4E-07 41.0 2.6 31 377-407 12-45 (50)
83 2enn_A NPKC-theta, protein kin 95.1 0.012 4E-07 44.9 2.9 44 354-407 22-68 (77)
84 3uej_A NPKC-delta, protein kin 95.1 0.01 3.6E-07 43.5 2.4 31 377-407 21-54 (65)
85 1faq_A RAF-1; transferase, ser 94.9 0.018 6.1E-07 40.1 3.1 30 377-407 15-44 (52)
86 2fnf_X Putative RAS effector N 94.9 0.022 7.4E-07 42.7 3.7 31 377-407 36-66 (72)
87 1y8f_A UNC-13 homolog A, MUNC1 94.7 0.02 7E-07 42.1 3.1 30 377-406 25-57 (66)
88 4b6d_A RAC GTPase-activating p 94.6 0.011 3.8E-07 42.7 1.4 43 300-342 8-52 (61)
89 1rfh_A RAS association (ralgds 94.5 0.02 6.7E-07 41.1 2.5 31 377-407 23-53 (59)
90 1tot_A CREB-binding protein; z 94.0 0.01 3.5E-07 41.3 0.1 31 376-407 6-37 (52)
91 3h6e_A Carbohydrate kinase, FG 93.9 0.076 2.6E-06 55.5 6.7 72 175-252 362-436 (482)
92 4b6d_A RAC GTPase-activating p 93.1 0.068 2.3E-06 38.5 3.3 30 377-406 20-51 (61)
93 3cet_A Conserved archaeal prot 93.1 0.013 4.6E-07 57.2 -0.7 18 66-83 128-145 (334)
94 3en9_A Glycoprotease, O-sialog 93.1 2.5 8.4E-05 44.7 16.8 203 10-246 72-297 (540)
95 2row_A RHO-associated protein 93.0 0.033 1.1E-06 42.9 1.5 30 377-406 36-70 (84)
96 3cer_A Possible exopolyphospha 92.9 0.094 3.2E-06 52.2 5.1 82 27-109 105-191 (343)
97 3ky9_A Proto-oncogene VAV; cal 92.3 0.085 2.9E-06 56.7 4.1 46 297-342 515-563 (587)
98 1u6z_A Exopolyphosphatase; alp 91.9 0.11 3.7E-06 54.7 4.3 77 28-109 100-176 (513)
99 2vrw_B P95VAV, VAV1, proto-onc 91.4 0.13 4.4E-06 52.5 4.1 44 299-342 345-391 (406)
100 2ysm_A Myeloid/lymphoid or mix 91.1 0.78 2.7E-05 37.3 7.9 80 310-408 6-87 (111)
101 3ven_A O-carbamoyltransferase 89.7 12 0.0004 39.5 17.2 81 171-256 280-362 (576)
102 3vgl_A Glucokinase; ROK family 89.6 6.9 0.00023 38.0 14.9 69 10-83 56-140 (321)
103 3hi0_A Putative exopolyphospha 89.6 0.29 9.9E-06 51.4 5.0 76 27-108 103-178 (508)
104 3qbx_A Anhydro-N-acetylmuramic 89.3 0.92 3.1E-05 45.1 8.0 75 176-253 260-338 (371)
105 4db3_A Glcnac kinase, N-acetyl 89.2 6.3 0.00021 38.4 14.2 47 203-249 270-324 (327)
106 2ysm_A Myeloid/lymphoid or mix 87.8 1.6 5.6E-05 35.3 7.4 77 376-465 7-86 (111)
107 1r79_A Diacylglycerol kinase, 87.5 0.47 1.6E-05 36.4 3.6 45 298-342 25-73 (84)
108 3cxl_A N-chimerin; SH2, RHO-GA 87.1 0.28 9.6E-06 50.9 2.9 43 300-342 209-254 (463)
109 3ky9_A Proto-oncogene VAV; cal 87.0 0.33 1.1E-05 52.0 3.4 45 353-407 516-563 (587)
110 3ttc_A HYPF, transcriptional r 86.5 2.1 7.1E-05 46.0 9.2 66 182-252 584-652 (657)
111 3zyy_X Iron-sulfur cluster bin 85.9 3 0.0001 44.6 10.0 82 165-247 498-580 (631)
112 2k16_A Transcription initiatio 85.2 0.79 2.7E-05 34.3 3.8 35 309-343 16-51 (75)
113 3cqy_A Anhydro-N-acetylmuramic 85.1 1.8 6.2E-05 42.9 7.4 73 175-253 266-344 (370)
114 2vrw_B P95VAV, VAV1, proto-onc 85.0 0.47 1.6E-05 48.2 3.2 44 355-408 346-393 (406)
115 3vth_A Hydrogenase maturation 83.5 1.9 6.6E-05 47.2 7.4 52 203-254 694-750 (761)
116 4g9i_A Hydrogenase maturation 83.1 3.2 0.00011 45.6 9.0 64 184-252 692-760 (772)
117 2kwj_A Zinc finger protein DPF 82.8 1.8 6.2E-05 35.3 5.3 80 313-408 3-91 (114)
118 2e2o_A Hexokinase; acetate and 82.4 2.4 8.1E-05 40.8 7.0 50 202-252 239-288 (299)
119 1we9_A PHD finger family prote 81.3 1.4 4.8E-05 31.7 3.7 36 375-410 5-42 (64)
120 3v43_A Histone acetyltransfera 80.6 0.83 2.8E-05 37.2 2.5 81 311-407 5-94 (112)
121 2ch5_A NAGK protein; transfera 80.4 44 0.0015 32.4 20.7 61 10-77 70-133 (347)
122 3v43_A Histone acetyltransfera 80.1 0.78 2.7E-05 37.4 2.1 80 377-465 6-94 (112)
123 2ap1_A Putative regulator prot 79.8 5.5 0.00019 38.7 8.7 44 37-82 120-163 (327)
124 2kwj_A Zinc finger protein DPF 78.9 1.4 4.8E-05 36.0 3.3 78 378-465 3-90 (114)
125 4gne_A Histone-lysine N-methyl 78.9 5.5 0.00019 31.9 6.7 70 310-406 14-85 (107)
126 3aap_A Ectonucleoside triphosp 78.7 2.3 7.8E-05 42.2 5.5 57 26-83 88-158 (353)
127 2ku3_A Bromodomain-containing 78.0 0.9 3.1E-05 33.6 1.7 33 377-409 17-52 (71)
128 3o70_A PHD finger protein 13; 76.3 2.5 8.7E-05 30.9 3.7 35 375-410 18-53 (68)
129 1r79_A Diacylglycerol kinase, 76.3 2.6 8.8E-05 32.2 3.9 48 416-467 26-75 (84)
130 2gup_A ROK family protein; sug 75.8 8.2 0.00028 36.7 8.5 50 203-252 228-288 (292)
131 3r8e_A Hypothetical sugar kina 75.3 8.5 0.00029 37.3 8.5 48 203-250 261-318 (321)
132 2lq6_A Bromodomain-containing 74.0 1.7 5.7E-05 33.6 2.3 44 299-342 5-50 (87)
133 2ku3_A Bromodomain-containing 73.7 2.7 9.2E-05 31.0 3.3 41 301-342 7-50 (71)
134 2k16_A Transcription initiatio 72.8 1.2 4.3E-05 33.2 1.3 36 375-410 17-53 (75)
135 3cj1_A Ectonucleoside triphosp 72.1 5.2 0.00018 41.1 6.2 44 40-83 150-208 (456)
136 2l5u_A Chromodomain-helicase-D 71.8 4.2 0.00014 28.9 3.9 34 307-342 7-40 (61)
137 3cxl_A N-chimerin; SH2, RHO-GA 71.8 1.9 6.5E-05 44.6 2.9 31 377-407 221-254 (463)
138 4htl_A Beta-glucoside kinase; 70.3 9.3 0.00032 36.6 7.3 51 203-253 238-293 (297)
139 3bex_A Type III pantothenate k 69.9 33 0.0011 31.9 10.8 149 10-215 56-223 (249)
140 1fp0_A KAP-1 corepressor; PHD 68.7 6.3 0.00022 30.3 4.5 31 375-407 24-54 (88)
141 2lv9_A Histone-lysine N-methyl 68.7 7.4 0.00025 30.6 5.1 32 310-342 27-59 (98)
142 2qm1_A Glucokinase; alpha-beta 67.1 15 0.00051 35.4 8.2 48 203-250 263-320 (326)
143 2lq6_A Bromodomain-containing 66.8 2.1 7.1E-05 33.1 1.4 30 377-406 18-49 (87)
144 2aa4_A Mannac kinase, putative 66.7 8.1 0.00028 36.7 6.0 47 203-249 234-286 (289)
145 1fp0_A KAP-1 corepressor; PHD 66.2 16 0.00053 28.1 6.2 31 309-341 23-53 (88)
146 4bbq_A Lysine-specific demethy 66.0 3.2 0.00011 33.8 2.6 82 313-410 9-95 (117)
147 2jmi_A Protein YNG1, ING1 homo 65.6 4.6 0.00016 31.3 3.2 35 375-410 25-62 (90)
148 2g6q_A Inhibitor of growth pro 65.3 3 0.0001 29.9 1.9 35 375-410 10-47 (62)
149 1z60_A TFIIH basal transcripti 65.0 1.7 6E-05 30.7 0.6 39 312-356 16-55 (59)
150 2yt5_A Metal-response element- 64.3 5.3 0.00018 28.8 3.2 34 376-409 6-42 (66)
151 3c6w_A P28ING5, inhibitor of g 63.6 3.3 0.00011 29.3 1.9 35 375-410 8-45 (59)
152 1wen_A Inhibitor of growth fam 63.2 5.9 0.0002 29.1 3.3 35 375-410 15-52 (71)
153 2vnf_A ING 4, P29ING4, inhibit 62.8 3.5 0.00012 29.2 1.9 35 375-410 9-46 (60)
154 2lri_C Autoimmune regulator; Z 62.6 11 0.00038 27.2 4.6 29 311-341 12-40 (66)
155 1wew_A DNA-binding family prot 62.1 3.8 0.00013 30.8 2.1 36 375-411 15-53 (78)
156 2yql_A PHD finger protein 21A; 61.9 8.5 0.00029 26.7 3.8 32 375-408 8-39 (56)
157 1we9_A PHD finger family prote 61.6 8.5 0.00029 27.4 3.9 35 309-343 4-40 (64)
158 4gne_A Histone-lysine N-methyl 61.3 20 0.0007 28.6 6.4 73 376-468 15-89 (107)
159 1saz_A Probable butyrate kinas 61.1 16 0.00054 36.4 7.2 69 178-249 274-346 (381)
160 3o70_A PHD finger protein 13; 61.0 11 0.00038 27.4 4.4 34 308-342 16-50 (68)
161 3zx3_A Ectonucleoside triphosp 60.9 11 0.00038 38.5 5.9 44 40-83 150-199 (452)
162 1mm2_A MI2-beta; PHD, zinc fin 60.3 17 0.00059 25.6 5.3 31 309-341 7-37 (61)
163 1xwh_A Autoimmune regulator; P 59.3 9.2 0.00032 27.5 3.7 31 376-408 8-38 (66)
164 1wg2_A Zinc finger (AN1-like) 59.1 13 0.00044 26.6 4.2 42 310-361 14-55 (64)
165 1f62_A Transcription factor WS 58.7 12 0.00039 25.3 4.0 29 313-341 2-31 (51)
166 1wep_A PHF8; structural genomi 57.4 6.2 0.00021 29.6 2.6 35 375-410 11-47 (79)
167 2hoe_A N-acetylglucosamine kin 56.9 30 0.001 34.2 8.4 49 202-250 314-370 (380)
168 1wem_A Death associated transc 56.3 5 0.00017 29.9 1.9 35 375-410 15-50 (76)
169 3vov_A Glucokinase, hexokinase 55.6 26 0.0009 33.4 7.5 70 8-82 55-141 (302)
170 1mm2_A MI2-beta; PHD, zinc fin 55.6 9.4 0.00032 27.0 3.1 31 376-408 9-39 (61)
171 2puy_A PHD finger protein 21A; 55.3 8.9 0.0003 27.0 3.0 31 376-408 5-35 (60)
172 3htv_A D-allose kinase, alloki 55.2 33 0.0011 32.9 8.1 51 202-252 239-300 (310)
173 2lri_C Autoimmune regulator; Z 54.9 6.5 0.00022 28.4 2.2 30 377-408 13-42 (66)
174 2l5u_A Chromodomain-helicase-D 54.6 4.8 0.00016 28.6 1.4 32 376-409 11-42 (61)
175 1wfh_A Zinc finger (AN1-like) 54.1 16 0.00056 26.1 4.1 42 310-361 14-55 (64)
176 1wfl_A Zinc finger protein 216 54.1 17 0.0006 26.7 4.3 43 310-362 24-66 (74)
177 1wev_A Riken cDNA 1110020M19; 53.2 8.9 0.00031 29.5 2.9 32 377-408 17-51 (88)
178 1weu_A Inhibitor of growth fam 52.2 11 0.00036 29.3 3.2 35 375-410 35-72 (91)
179 2ct0_A Non-SMC element 1 homol 52.1 7.4 0.00025 28.9 2.2 33 309-342 13-45 (74)
180 2lv9_A Histone-lysine N-methyl 51.5 12 0.00041 29.4 3.4 32 377-409 29-61 (98)
181 1wil_A KIAA1045 protein; ring 51.2 11 0.00038 28.5 2.9 33 310-342 14-46 (89)
182 1zbs_A Hypothetical protein PG 50.7 6.7 0.00023 37.5 2.3 62 9-77 58-121 (291)
183 1zc6_A Probable N-acetylglucos 50.3 8.2 0.00028 37.1 2.8 57 12-77 77-134 (305)
184 2xb1_A Pygopus homolog 2, B-ce 49.3 10 0.00034 30.3 2.7 33 377-409 4-39 (105)
185 1wee_A PHD finger family prote 49.2 12 0.00042 27.4 3.0 35 375-410 15-51 (72)
186 1z6r_A MLC protein; transcript 49.1 43 0.0015 33.4 8.2 50 203-252 335-394 (406)
187 2yql_A PHD finger protein 21A; 49.1 20 0.00068 24.7 3.9 31 310-342 8-38 (56)
188 1weo_A Cellulose synthase, cat 49.0 7.1 0.00024 29.8 1.6 30 376-405 16-50 (93)
189 1x4i_A Inhibitor of growth pro 48.8 8.3 0.00028 28.3 1.9 34 375-409 5-41 (70)
190 2jrp_A Putative cytoplasmic pr 48.6 14 0.00046 27.9 3.1 28 312-339 3-34 (81)
191 1wfp_A Zinc finger (AN1-like) 48.6 16 0.00055 26.9 3.4 42 310-361 24-65 (74)
192 2yt5_A Metal-response element- 46.6 19 0.00064 25.7 3.6 34 309-342 4-40 (66)
193 1wev_A Riken cDNA 1110020M19; 46.0 18 0.00061 27.8 3.6 33 310-342 15-50 (88)
194 2yhw_A Bifunctional UDP-N-acet 45.9 73 0.0025 30.8 9.1 44 37-82 131-174 (343)
195 2jmi_A Protein YNG1, ING1 homo 45.6 18 0.00061 27.9 3.5 34 308-342 23-59 (90)
196 3epq_A Putative fructokinase; 45.1 33 0.0011 32.8 6.3 44 37-82 97-140 (302)
197 1wee_A PHD finger family prote 45.0 18 0.0006 26.5 3.3 33 309-342 14-48 (72)
198 1f62_A Transcription factor WS 45.0 8.3 0.00028 26.0 1.4 31 378-408 2-33 (51)
199 3h0g_I DNA-directed RNA polyme 44.5 36 0.0012 27.4 5.4 25 312-336 5-37 (113)
200 2e6s_A E3 ubiquitin-protein li 44.1 35 0.0012 25.4 4.8 29 313-341 28-57 (77)
201 1joc_A EEA1, early endosomal a 43.9 7.9 0.00027 32.0 1.3 34 309-342 67-102 (125)
202 3nis_A E3 ubiquitin-protein li 43.8 29 0.00098 26.2 4.3 43 381-423 10-55 (82)
203 3lqh_A Histone-lysine N-methyl 43.7 9.8 0.00034 33.7 2.0 33 377-409 3-40 (183)
204 3o8m_A Hexokinase; rnaseh-like 43.6 66 0.0022 33.1 8.5 24 64-87 79-102 (485)
205 1xwh_A Autoimmune regulator; P 43.5 27 0.00091 25.0 4.0 30 310-341 7-36 (66)
206 3u5n_A E3 ubiquitin-protein li 43.4 23 0.00077 31.9 4.5 30 310-341 6-35 (207)
207 2dkt_A Ring finger and CHY zin 43.0 12 0.0004 31.6 2.2 20 379-398 104-123 (143)
208 2l43_A N-teminal domain from h 42.6 8.6 0.00029 29.6 1.3 34 376-409 25-61 (88)
209 3o7a_A PHD finger protein 13 v 42.5 15 0.00051 25.0 2.4 33 377-410 5-38 (52)
210 1wjv_A Cell growth regulating 42.2 9.5 0.00033 28.5 1.4 11 376-386 10-20 (79)
211 1x61_A Thyroid receptor intera 42.2 28 0.00097 24.9 4.1 13 311-323 5-17 (72)
212 1z2q_A LM5-1; membrane protein 41.5 20 0.0007 27.1 3.3 33 375-407 20-54 (84)
213 1kae_A HDH, histidinol dehydro 40.7 97 0.0033 31.1 8.8 69 11-83 154-243 (434)
214 2q2r_A Glucokinase 1, putative 40.1 36 0.0012 33.5 5.8 18 37-54 127-144 (373)
215 2ri7_A Nucleosome-remodeling f 39.7 7.2 0.00025 34.2 0.5 35 375-410 7-43 (174)
216 3qt1_I DNA-directed RNA polyme 39.7 15 0.0005 30.7 2.4 42 353-400 7-56 (133)
217 1wen_A Inhibitor of growth fam 39.0 32 0.0011 25.1 3.8 33 309-342 14-49 (71)
218 1x4i_A Inhibitor of growth pro 39.0 22 0.00076 25.9 3.0 33 309-342 4-39 (70)
219 3nw0_A Non-structural maintena 38.4 11 0.00038 34.9 1.6 33 309-342 178-210 (238)
220 2jne_A Hypothetical protein YF 37.9 9.6 0.00033 29.6 0.8 44 353-404 17-64 (101)
221 2jun_A Midline-1; B-BOX, TRIM, 37.8 24 0.00082 27.4 3.3 83 311-406 3-87 (101)
222 3o36_A Transcription intermedi 37.8 39 0.0013 29.6 5.1 29 311-341 4-32 (184)
223 2puy_A PHD finger protein 21A; 37.7 33 0.0011 23.9 3.7 29 311-341 5-33 (60)
224 3asl_A E3 ubiquitin-protein li 37.3 37 0.0013 24.6 4.0 29 313-341 20-49 (70)
225 3cer_A Possible exopolyphospha 37.1 1.5E+02 0.005 28.9 9.6 69 63-148 14-84 (343)
226 3c6w_A P28ING5, inhibitor of g 36.9 17 0.00059 25.5 2.0 33 309-342 7-42 (59)
227 1z05_A Transcriptional regulat 36.7 84 0.0029 31.5 8.0 48 203-251 358-415 (429)
228 2xb1_A Pygopus homolog 2, B-ce 36.6 23 0.00077 28.2 2.9 32 311-342 3-37 (105)
229 1wep_A PHF8; structural genomi 36.5 21 0.00071 26.7 2.5 33 309-342 10-44 (79)
230 2g6q_A Inhibitor of growth pro 36.3 17 0.00057 25.8 1.9 33 309-342 9-44 (62)
231 2jne_A Hypothetical protein YF 36.1 10 0.00036 29.4 0.8 40 300-339 19-64 (101)
232 1zxo_A Conserved hypothetical 35.7 6.2 0.00021 37.7 -0.7 60 10-76 57-118 (291)
233 1x4l_A Skeletal muscle LIM-pro 35.7 34 0.0012 24.5 3.6 13 311-323 5-17 (72)
234 1wil_A KIAA1045 protein; ring 35.4 12 0.00039 28.4 0.9 33 377-409 16-48 (89)
235 4am6_A Actin-like protein ARP8 35.2 17 0.00057 38.8 2.4 23 204-226 502-524 (655)
236 2vnf_A ING 4, P29ING4, inhibit 34.6 19 0.00063 25.4 1.9 33 309-342 8-43 (60)
237 1wff_A Riken cDNA 2810002D23 p 34.5 27 0.00093 26.5 2.8 40 310-359 24-64 (85)
238 3ny3_A E3 ubiquitin-protein li 34.5 15 0.00052 27.3 1.4 43 381-423 6-51 (75)
239 2e6r_A Jumonji/ARID domain-con 34.2 19 0.00065 27.9 2.0 32 377-408 17-49 (92)
240 1wew_A DNA-binding family prot 33.8 30 0.001 25.7 3.0 35 309-344 14-51 (78)
241 2rsd_A E3 SUMO-protein ligase 33.7 31 0.0011 24.8 3.0 34 376-410 10-46 (68)
242 2e6s_A E3 ubiquitin-protein li 33.3 29 0.00098 25.8 2.8 31 378-408 28-59 (77)
243 2yhx_A Hexokinase B; transfera 33.2 1.6E+02 0.0054 29.9 9.4 26 63-88 59-84 (457)
244 1twf_I B12.6, DNA-directed RNA 33.1 32 0.0011 28.1 3.3 26 311-336 4-37 (122)
245 2kwq_A Protein MCM10 homolog; 32.6 14 0.00049 28.5 1.1 62 325-408 15-83 (92)
246 2rsd_A E3 SUMO-protein ligase 32.3 48 0.0016 23.8 3.9 33 310-343 9-44 (68)
247 2vpb_A Hpygo1, pygopus homolog 31.9 16 0.00055 26.3 1.2 35 376-410 8-45 (65)
248 3kqi_A GRC5, PHD finger protei 30.9 15 0.00052 27.1 0.9 34 376-410 10-45 (75)
249 3ask_A E3 ubiquitin-protein li 30.5 46 0.0016 30.4 4.2 30 312-341 175-205 (226)
250 2l43_A N-teminal domain from h 30.4 23 0.00078 27.1 1.9 34 309-342 23-59 (88)
251 2e6r_A Jumonji/ARID domain-con 30.4 29 0.001 26.7 2.6 32 310-341 15-47 (92)
252 2e1z_A Propionate kinase; TDCD 30.1 33 0.0011 34.4 3.5 47 177-227 309-356 (415)
253 1sz2_A Glucokinase, glucose ki 30.0 94 0.0032 29.8 6.9 70 9-83 65-156 (332)
254 3asl_A E3 ubiquitin-protein li 29.8 26 0.00089 25.5 2.0 30 378-407 20-50 (70)
255 1wyh_A SLIM 2, skeletal muscle 29.6 47 0.0016 23.6 3.5 12 312-323 6-17 (72)
256 3shb_A E3 ubiquitin-protein li 29.4 48 0.0016 24.6 3.5 29 313-341 28-57 (77)
257 4gic_A HDH, histidinol dehydro 29.3 66 0.0023 32.2 5.5 72 11-83 160-249 (423)
258 1e8j_A Rubredoxin; iron-sulfur 29.2 49 0.0017 22.5 3.2 14 325-338 3-16 (52)
259 2ro1_A Transcription intermedi 28.8 50 0.0017 29.2 4.2 28 312-341 3-30 (189)
260 3mhs_A Ubiquitin carboxyl-term 28.4 25 0.00085 36.0 2.4 60 377-460 49-111 (476)
261 1wig_A KIAA1808 protein; LIM d 28.1 57 0.0019 23.5 3.7 12 312-323 6-17 (73)
262 1t6c_A Exopolyphosphatase; alp 27.9 1.8E+02 0.0063 27.7 8.4 31 64-94 11-41 (315)
263 1wem_A Death associated transc 27.8 35 0.0012 25.1 2.5 32 310-342 15-47 (76)
264 1x4u_A Zinc finger, FYVE domai 27.7 51 0.0017 24.8 3.5 36 307-342 10-47 (84)
265 1x4u_A Zinc finger, FYVE domai 27.6 22 0.00075 26.9 1.3 32 375-406 13-46 (84)
266 2cor_A Pinch protein; LIM doma 27.5 67 0.0023 23.5 4.1 14 310-323 14-27 (79)
267 3o36_A Transcription intermedi 27.4 39 0.0013 29.7 3.2 29 377-407 5-33 (184)
268 2yw8_A RUN and FYVE domain-con 27.1 42 0.0014 25.1 2.9 36 307-342 15-52 (82)
269 1z2q_A LM5-1; membrane protein 27.1 51 0.0018 24.8 3.4 37 306-342 16-54 (84)
270 2lo3_A SAGA-associated factor 26.8 14 0.00048 23.8 0.1 12 375-386 16-27 (44)
271 1x68_A FHL5 protein; four-and- 26.8 43 0.0015 24.3 2.9 12 312-323 6-17 (76)
272 1x64_A Alpha-actinin-2 associa 26.6 54 0.0018 24.7 3.5 16 309-324 23-38 (89)
273 2egq_A FHL1 protein; LIM domai 26.5 37 0.0013 24.7 2.5 12 312-323 16-27 (77)
274 3t7l_A Zinc finger FYVE domain 26.2 43 0.0015 25.6 2.8 31 376-406 20-52 (90)
275 3t7l_A Zinc finger FYVE domain 26.1 46 0.0016 25.5 3.0 34 309-342 18-53 (90)
276 1weu_A Inhibitor of growth fam 25.8 58 0.002 25.0 3.5 33 309-342 34-69 (91)
277 3f9m_A Glucokinase; hexokinase 25.7 1.5E+02 0.0052 30.2 7.6 25 63-87 75-99 (470)
278 1x4k_A Skeletal muscle LIM-pro 25.7 49 0.0017 23.5 3.0 12 312-323 6-17 (72)
279 1x4s_A Protein FON, zinc finge 25.3 16 0.00055 25.7 0.2 29 377-405 12-49 (59)
280 3j20_Y 30S ribosomal protein S 25.2 43 0.0015 22.6 2.3 24 376-399 19-46 (50)
281 2vpb_A Hpygo1, pygopus homolog 25.2 32 0.0011 24.6 1.8 34 309-342 6-42 (65)
282 2yw8_A RUN and FYVE domain-con 24.9 52 0.0018 24.6 3.0 32 375-406 18-51 (82)
283 3f6q_B LIM and senescent cell 24.8 40 0.0014 23.9 2.4 14 311-324 11-24 (72)
284 1x4w_A Hypothetical protein FL 24.8 29 0.00099 25.0 1.4 43 309-361 13-58 (67)
285 1weo_A Cellulose synthase, cat 24.7 46 0.0016 25.4 2.6 33 310-342 15-52 (93)
286 2kdx_A HYPA, hydrogenase/ureas 24.3 35 0.0012 27.6 2.1 21 377-397 74-97 (119)
287 1dxg_A Desulforedoxin; non-hem 24.2 29 0.00099 21.5 1.2 15 323-337 4-18 (36)
288 1g47_A Pinch protein; LIM doma 24.1 40 0.0014 24.4 2.3 13 310-322 10-22 (77)
289 3mpx_A FYVE, rhogef and PH dom 24.1 16 0.00056 36.9 0.0 34 309-342 373-408 (434)
290 1y02_A CARP2, FYVE-ring finger 24.0 45 0.0016 27.1 2.7 34 309-342 17-52 (120)
291 1joc_A EEA1, early endosomal a 23.7 49 0.0017 27.1 2.9 31 376-406 69-101 (125)
292 2kgg_A Histone demethylase jar 23.6 57 0.002 21.9 2.8 33 378-410 4-39 (52)
293 3u5n_A E3 ubiquitin-protein li 23.4 39 0.0013 30.3 2.5 30 376-407 7-36 (207)
294 2iir_A Acetate kinase; transfe 23.2 84 0.0029 31.4 5.0 47 177-227 301-348 (403)
295 3hm8_A Hexokinase-3; glucose, 23.1 2.3E+02 0.0079 28.6 8.3 30 63-93 57-86 (445)
296 1o66_A 3-methyl-2-oxobutanoate 23.1 1.1E+02 0.0038 28.8 5.5 56 16-77 19-90 (275)
297 3ist_A Glutamate racemase; str 22.9 94 0.0032 29.1 5.1 59 185-249 163-221 (269)
298 3mdq_A Exopolyphosphatase; str 22.8 1.5E+02 0.005 28.4 6.6 31 64-94 3-33 (315)
299 1msz_A DNA-binding protein smu 22.6 57 0.0019 24.8 2.8 29 13-41 33-61 (86)
300 2ro1_A Transcription intermedi 22.5 48 0.0017 29.3 2.8 29 377-407 3-31 (189)
301 1vd4_A Transcription initiatio 22.5 40 0.0014 23.1 1.9 24 376-399 14-48 (62)
302 4gzn_C ZFP-57, zinc finger pro 22.2 24 0.00082 24.6 0.6 26 309-334 2-41 (60)
303 1hnj_A Beta-ketoacyl-acyl carr 22.0 1E+02 0.0034 29.3 5.3 48 177-227 212-259 (317)
304 1g99_A Acetate kinase; alpha/b 22.0 79 0.0027 31.6 4.5 46 177-226 301-347 (408)
305 3lwd_A 6-phosphogluconolactona 22.0 1.4E+02 0.0048 27.1 5.9 46 173-223 9-54 (226)
306 2l3k_A Rhombotin-2, linker, LI 21.5 85 0.0029 25.2 4.0 11 313-323 10-20 (123)
307 4ijn_A Acetate kinase, acetoki 21.2 71 0.0024 31.8 3.9 46 177-226 302-348 (398)
308 1bdg_A Hexokinase; phosphotran 20.9 3E+02 0.01 27.8 8.8 23 64-86 67-89 (451)
309 2co8_A NEDD9 interacting prote 20.8 1E+02 0.0036 22.6 4.1 13 310-322 14-26 (82)
310 3uhf_A Glutamate racemase; str 20.8 1E+02 0.0035 29.0 4.9 53 186-246 184-236 (274)
311 3khy_A Propionate kinase; csgi 20.7 98 0.0034 30.6 4.8 46 178-227 293-339 (384)
312 3shb_A E3 ubiquitin-protein li 20.7 50 0.0017 24.5 2.1 31 378-408 28-59 (77)
313 1rut_X Flinc4, fusion protein 20.6 14 0.00047 32.7 -1.2 29 311-340 5-33 (188)
314 3h0g_L DNA-directed RNA polyme 20.6 45 0.0015 23.8 1.7 23 377-399 22-47 (63)
315 3ask_A E3 ubiquitin-protein li 20.5 52 0.0018 30.0 2.6 31 378-408 176-207 (226)
316 3lqh_A Histone-lysine N-methyl 20.2 53 0.0018 28.9 2.5 31 312-342 3-38 (183)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=7.7e-46 Score=399.97 Aligned_cols=273 Identities=71% Similarity=1.083 Sum_probs=257.4
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSL 81 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv 81 (539)
.||.++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|+++.....+..++|||+||||+|+++
T Consensus 130 ~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv 209 (554)
T 1yuw_A 130 IAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSI 209 (554)
T ss_dssp HHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEE
T ss_pred HHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEE
Confidence 57889999999999999999999999999999999999999999999999999998765434789999999999999999
Q ss_pred EEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccccC
Q 048693 82 LAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSLYE 161 (539)
Q Consensus 82 ~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~~~ 161 (539)
+++.++.++++++.++..+||++||++|++++.++|.++++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.+
T Consensus 210 ~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~ 289 (554)
T 1yuw_A 210 LTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289 (554)
T ss_dssp EEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSS
T ss_pred EEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccC
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999998888
Q ss_pred CceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhh
Q 048693 162 GIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAV 241 (539)
Q Consensus 162 ~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~av 241 (539)
|.++...|+|++|+++++++++++.+.|+++|++++....+|+.|+|+||+|++|+|++.|++.|++.++..+.||+++|
T Consensus 290 g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aV 369 (554)
T 1yuw_A 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369 (554)
T ss_dssp SCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHH
T ss_pred CceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHH
Confidence 88999999999999999999999999999999999988889999999999999999999999999778888999999999
Q ss_pred hchHHHHHHHHcCCCCCCccceEEEeeccCCCC
Q 048693 242 AYGAAVQAAVLSGNRSNKVEDIVILDVNPNYNS 274 (539)
Q Consensus 242 A~GAal~a~~~~~~~~~~~~~~~~~d~~p~~~~ 274 (539)
|+||+++|+.++|...++++++++.|+.|++++
T Consensus 370 A~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slg 402 (554)
T 1yuw_A 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLG 402 (554)
T ss_dssp HHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEE
T ss_pred HHHHHHHHHHhcCCccccccceEEEEeeeeEEE
Confidence 999999999999865667889999999999865
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=8.4e-46 Score=406.30 Aligned_cols=270 Identities=33% Similarity=0.545 Sum_probs=253.4
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhcccccc-----CCCceEEEEEeCCce
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKA-----ASEKNVLIFDLGGGT 76 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~-----~~~~~vlvvDiGggT 76 (539)
.||.++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|++.+.. ..+..++|||+||||
T Consensus 129 ~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT 208 (675)
T 3d2f_A 129 TVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSS 208 (675)
T ss_dssp HHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSC
T ss_pred HHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCc
Confidence 578899999999999999999999999999999999999999999999999999875521 246889999999999
Q ss_pred eEEEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEE
Q 048693 77 FDVSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEI 156 (539)
Q Consensus 77 tdisv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i 156 (539)
||++++++.++.++++++.++..+||++||++|++++..+|.++++.++..+++++.+|+.+||++|+.||...+..+.+
T Consensus 209 ~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i 288 (675)
T 3d2f_A 209 YTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSV 288 (675)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred EEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEE
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999988888999
Q ss_pred ccccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCC
Q 048693 157 DSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNIN 236 (539)
Q Consensus 157 ~~~~~~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~ 236 (539)
+.+.+|.++..+|||++|+++++++++++...|+++|++++++..+|+.|+|+||+|++|+|++.|++.| +.++....|
T Consensus 289 ~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~n 367 (675)
T 3d2f_A 289 ESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLN 367 (675)
T ss_dssp TTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSC
T ss_pred eeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCC
Confidence 8888888999999999999999999999999999999999988889999999999999999999999999 678888999
Q ss_pred cchhhhchHHHHHHHHcCCCCCCccceEEEeeccCCCC
Q 048693 237 PDEAVAYGAAVQAAVLSGNRSNKVEDIVILDVNPNYNS 274 (539)
Q Consensus 237 p~~avA~GAal~a~~~~~~~~~~~~~~~~~d~~p~~~~ 274 (539)
|+++||+|||++|+.+++. ++++++.+.|+.|++.+
T Consensus 368 PdeaVA~GAa~~a~~ls~~--~~v~~~~l~Dv~p~slg 403 (675)
T 3d2f_A 368 QDEAIAKGAAFICAIHSPT--LRVRPFKFEDIHPYSVS 403 (675)
T ss_dssp TTTHHHHHHHHHHHHTCSS--CCCCCCEEEEEECSCEE
T ss_pred cchHHHHHHHHHHHHhCCC--CcccceEEEeeeecceE
Confidence 9999999999999999973 56889999999999865
No 3
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=2.8e-45 Score=399.30 Aligned_cols=267 Identities=49% Similarity=0.812 Sum_probs=250.6
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSL 81 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv 81 (539)
.|+.++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|++.... .+..++|||+||||+|+++
T Consensus 126 ~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~-~~~~vlV~DlGGGT~Dvsi 204 (605)
T 4b9q_A 126 TAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGT-GNRTIAVYDLGGGAFDISI 204 (605)
T ss_dssp HHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCC-SSEEEEEEEECSSCEEEEE
T ss_pred HHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccC-CCCEEEEEECCCCeEEEEE
Confidence 688999999999999999999999999999999999999999999999999999887653 4689999999999999999
Q ss_pred EEEec----CeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEc
Q 048693 82 LAIEK----GIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEID 157 (539)
Q Consensus 82 ~~~~~----~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~ 157 (539)
+++.+ +.++++++.++..+||++||++|++++.++|.++++.++..+++.+.+|+.+||++|+.|+......+.++
T Consensus 205 ~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~ 284 (605)
T 4b9q_A 205 IEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLP 284 (605)
T ss_dssp EEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEe
Confidence 99998 89999999999999999999999999999999999988888999999999999999999999998888877
Q ss_pred cccCC----ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccc
Q 048693 158 SLYEG----IDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCK 233 (539)
Q Consensus 158 ~~~~~----~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~ 233 (539)
.+..+ .++..+|||++|+++++++++++...++++|++++....+|+.|+|+||+|++|+|++.|++.| +.++..
T Consensus 285 ~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~ 363 (605)
T 4b9q_A 285 YITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRK 363 (605)
T ss_dssp EEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCS
T ss_pred eeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCC
Confidence 54432 6788999999999999999999999999999999998899999999999999999999999999 688889
Q ss_pred cCCcchhhhchHHHHHHHHcCCCCCCccceEEEeeccCCCC
Q 048693 234 NINPDEAVAYGAAVQAAVLSGNRSNKVEDIVILDVNPNYNS 274 (539)
Q Consensus 234 ~~~p~~avA~GAal~a~~~~~~~~~~~~~~~~~d~~p~~~~ 274 (539)
..||+++||+|||++|+.++|. +++++++|++|++++
T Consensus 364 ~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~slg 400 (605)
T 4b9q_A 364 DVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLG 400 (605)
T ss_dssp SSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSSCEE
T ss_pred CcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeeeEEE
Confidence 9999999999999999999985 578999999999875
No 4
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=7.1e-45 Score=396.06 Aligned_cols=267 Identities=49% Similarity=0.822 Sum_probs=247.7
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSL 81 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv 81 (539)
.||.++|.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|+++... .+..++|||+||||||+++
T Consensus 126 ~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~-~~~~vlV~DlGGGT~Dvsi 204 (605)
T 2kho_A 126 TAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGT-GNRTIAVYDLGGGTFDISI 204 (605)
T ss_dssp HHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSS-SEEEEEEEEECSSCEEEEE
T ss_pred HHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccC-CCCEEEEEECCCCeEEEEE
Confidence 588899999999999999999999999999999999999999999999999999987642 4788999999999999999
Q ss_pred EEEe----cCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEc
Q 048693 82 LAIE----KGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEID 157 (539)
Q Consensus 82 ~~~~----~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~ 157 (539)
+++. ++.++++++.++..+||++||++|++++.++|.++++.++..+++.+.+|+.+||++|+.|+...+..+.++
T Consensus 205 ~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~ 284 (605)
T 2kho_A 205 IEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLP 284 (605)
T ss_dssp EEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEec
Confidence 9998 789999999999999999999999999999999999988888999999999999999999999988888887
Q ss_pred cccC---C-ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccc
Q 048693 158 SLYE---G-IDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCK 233 (539)
Q Consensus 158 ~~~~---~-~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~ 233 (539)
.+.+ | .++..+|||++|+++++++++++.+.|+++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++..
T Consensus 285 ~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~ 363 (605)
T 2kho_A 285 YITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRK 363 (605)
T ss_dssp EEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBC
T ss_pred ccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCc
Confidence 6543 2 4667899999999999999999999999999999988889999999999999999999999999 678889
Q ss_pred cCCcchhhhchHHHHHHHHcCCCCCCccceEEEeeccCCCC
Q 048693 234 NINPDEAVAYGAAVQAAVLSGNRSNKVEDIVILDVNPNYNS 274 (539)
Q Consensus 234 ~~~p~~avA~GAal~a~~~~~~~~~~~~~~~~~d~~p~~~~ 274 (539)
..||+++||+|||++|+.++|. ++++++.|+.|++++
T Consensus 364 ~~npd~aVA~GAa~~a~~l~~~----~~~~~l~dv~p~slg 400 (605)
T 2kho_A 364 DVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLG 400 (605)
T ss_dssp SSCTTTHHHHHHHHHHTTTTTS----CCCCCCSBCCCCCEE
T ss_pred CCCcchHHHHHHHHHHHHhcCC----ccCceEEeeeeeecc
Confidence 9999999999999999999874 578889999999865
No 5
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=7.6e-43 Score=364.24 Aligned_cols=253 Identities=71% Similarity=1.087 Sum_probs=240.2
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccC--CCceEEEEEeCCceeEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAA--SEKNVLIFDLGGGTFDV 79 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~--~~~~vlvvDiGggTtdi 79 (539)
.|+.++|.++.++|||||++|++.||++|++|++.||++.+.+++||+|||++|+...... .+..++|||+||||||+
T Consensus 149 ~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dv 228 (404)
T 3i33_A 149 IAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDV 228 (404)
T ss_dssp HHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEE
T ss_pred HHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEE
Confidence 5788999999999999999999999999999999999999999999999999998776532 57899999999999999
Q ss_pred EEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccc
Q 048693 80 SLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSL 159 (539)
Q Consensus 80 sv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~ 159 (539)
+++++.++.+++++..++..+||++||++|.+++.++|.++++.++..+++...+|+.++|++|+.|+......+.++.+
T Consensus 229 sv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~ 308 (404)
T 3i33_A 229 SILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 308 (404)
T ss_dssp EEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEE
T ss_pred EEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeec
Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999888
Q ss_pred cCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcch
Q 048693 160 YEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDE 239 (539)
Q Consensus 160 ~~~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~ 239 (539)
.++.++...|+|++|+++++++++++.+.|+++|++++....+++.|+|+||+|++|+|++.|++.|++.++..+.||++
T Consensus 309 ~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ 388 (404)
T 3i33_A 309 YEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE 388 (404)
T ss_dssp ETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTT
T ss_pred cCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHH
Confidence 88999999999999999999999999999999999998888899999999999999999999999998888999999999
Q ss_pred hhhchHHHHHHHHcC
Q 048693 240 AVAYGAAVQAAVLSG 254 (539)
Q Consensus 240 avA~GAal~a~~~~~ 254 (539)
+||+|||++|+.++|
T Consensus 389 ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 389 AVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999986
No 6
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=2e-43 Score=378.09 Aligned_cols=266 Identities=48% Similarity=0.813 Sum_probs=245.8
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSL 81 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv 81 (539)
.||+++|.++.++|||||++|++.||+++++|++.||++.+.+++||+|||++|+++.. .+..++|||+||||||+++
T Consensus 100 ~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~--~~~~vlV~D~GgGT~Dvsv 177 (509)
T 2v7y_A 100 YAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE--EDQTILVYDLGGGTFDVSI 177 (509)
T ss_dssp HHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS--CSEEEEEEEECSSCEEEEE
T ss_pred HHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC--CCCEEEEEECCCCeEEEEE
Confidence 57889999999999999999999999999999999999999999999999999998764 4789999999999999999
Q ss_pred EEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccccC
Q 048693 82 LAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSLYE 161 (539)
Q Consensus 82 ~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~~~ 161 (539)
+++.++.++++++.++..+||++||+.|++++.++|.++++.++..+++.+.+|+++||++|+.|+...+..+.++.+.+
T Consensus 178 ~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~ 257 (509)
T 2v7y_A 178 LELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISA 257 (509)
T ss_dssp EEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEE
T ss_pred EEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEecccc
Confidence 99999999999999999999999999999999999998888888888999999999999999999999888888775543
Q ss_pred ---C-ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCc
Q 048693 162 ---G-IDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINP 237 (539)
Q Consensus 162 ---~-~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p 237 (539)
| .++..+|+|++|+++++++++++.+.|+++|+++++...+++.|+|+||+|++|+|++.|++.| +.++....||
T Consensus 258 ~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p 336 (509)
T 2v7y_A 258 NENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNP 336 (509)
T ss_dssp ETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCT
T ss_pred CCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCc
Confidence 2 4567899999999999999999999999999999888888999999999999999999999999 6778889999
Q ss_pred chhhhchHHHHHHHHcCCCCCCccceEEEeeccCCCC
Q 048693 238 DEAVAYGAAVQAAVLSGNRSNKVEDIVILDVNPNYNS 274 (539)
Q Consensus 238 ~~avA~GAal~a~~~~~~~~~~~~~~~~~d~~p~~~~ 274 (539)
+++||+||+++|+.++|. ++++++.|+.|++++
T Consensus 337 ~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~slg 369 (509)
T 2v7y_A 337 DEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLG 369 (509)
T ss_dssp TTHHHHHHHHHHHHHHTC----CCCCCCCCBCSSEEE
T ss_pred hhhhHhhHHHHHHHhcCC----ccCceEEEeeccccc
Confidence 999999999999999975 567888999998864
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2.7e-42 Score=360.52 Aligned_cols=252 Identities=35% Similarity=0.592 Sum_probs=233.5
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhcccc-ccCCCceEEEEEeCCceeEEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDR-KAASEKNVLIFDLGGGTFDVS 80 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~-~~~~~~~vlvvDiGggTtdis 80 (539)
.|+.++|.++.++|||||++|++.||++|++|++.||++.+.+++||+|||++|+... ....+..++|||+||||||++
T Consensus 141 ~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvs 220 (409)
T 4gni_A 141 AASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVT 220 (409)
T ss_dssp HHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEE
T ss_pred HHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEE
Confidence 5788999999999999999999999999999999999999999999999999998765 224578999999999999999
Q ss_pred EEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEcc
Q 048693 81 LLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTE--KDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDS 158 (539)
Q Consensus 81 v~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~ 158 (539)
++++.++.+++++..++..+||++||++|++++.++|..+++ .+...+++.+.+|+.++|++|+.|+......+.++.
T Consensus 221 v~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~ 300 (409)
T 4gni_A 221 VLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVES 300 (409)
T ss_dssp EEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred EEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeec
Confidence 999999999999999889999999999999999999998888 777788999999999999999999999999999998
Q ss_pred ccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCC-cc------
Q 048693 159 LYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGK-RL------ 231 (539)
Q Consensus 159 ~~~~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~-~v------ 231 (539)
+.++.++..+|||++|+++++++++++.+.|+++|++++....+|+.|+|+||+|++|+|++.|++.|+.. ++
T Consensus 301 ~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~ 380 (409)
T 4gni_A 301 LIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTD 380 (409)
T ss_dssp EETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTC
T ss_pred ccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCcccccccccc
Confidence 88899999999999999999999999999999999999988889999999999999999999999999543 34
Q ss_pred cccCCcchhhhchHHHHHHHHc
Q 048693 232 CKNINPDEAVAYGAAVQAAVLS 253 (539)
Q Consensus 232 ~~~~~p~~avA~GAal~a~~~~ 253 (539)
....||+++||+|||++|+...
T Consensus 381 ~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 381 PSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp TTCCCTTTHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhhhhh
Confidence 5778999999999999999886
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.4e-41 Score=353.43 Aligned_cols=251 Identities=62% Similarity=0.993 Sum_probs=238.6
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSL 81 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv 81 (539)
.|++++|.++.++|||||++|++.+|+++++|++.||++.+.+++||+|||++|++.... .+..++|+|+||||||+++
T Consensus 144 ~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~-~~~~vlV~D~Gggt~dvsv 222 (394)
T 3qfu_A 144 IAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSD-KEHQIIVYDLGGGTFDVSL 222 (394)
T ss_dssp HHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCS-SCEEEEEEEECSSCEEEEE
T ss_pred HHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccCC-CCceEEEEEcCCCceeEEE
Confidence 578899999999999999999999999999999999999999999999999999776543 5788999999999999999
Q ss_pred EEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccccC
Q 048693 82 LAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSLYE 161 (539)
Q Consensus 82 ~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~~~ 161 (539)
+++.++.+++++..++..+||++||+.|.+++.++|.++++.++..+++...+|+.++|++|+.|+......+.++.+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~ 302 (394)
T 3qfu_A 223 LSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVD 302 (394)
T ss_dssp EEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEET
T ss_pred EEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred CceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhh
Q 048693 162 GIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAV 241 (539)
Q Consensus 162 ~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~av 241 (539)
+.++...++|++|+++++++++++.+.|++.|++++....+++.|+|+||+|++|+|++.|++.|++.++..+.||+++|
T Consensus 303 ~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~av 382 (394)
T 3qfu_A 303 GIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAV 382 (394)
T ss_dssp TEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHH
T ss_pred CceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHH
Confidence 99999999999999999999999999999999999888888999999999999999999999999888899999999999
Q ss_pred hchHHHHHHHHc
Q 048693 242 AYGAAVQAAVLS 253 (539)
Q Consensus 242 A~GAal~a~~~~ 253 (539)
|+|||++|+.++
T Consensus 383 a~Gaa~~a~~ls 394 (394)
T 3qfu_A 383 AYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 999999999874
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=7.4e-40 Score=339.20 Aligned_cols=249 Identities=50% Similarity=0.827 Sum_probs=226.2
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEE
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSL 81 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv 81 (539)
.|+.++|.++.++|||||++|++.||+++++|++.||++.+.+++||+|||++|+.... ..+..++|+|+||||||+++
T Consensus 126 ~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdvsv 204 (383)
T 1dkg_D 126 TAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISI 204 (383)
T ss_dssp HHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEEEE
T ss_pred HHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEEEE
Confidence 47788999999999999999999999999999999999999999999999999987654 24678999999999999999
Q ss_pred EEEe----cCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEc
Q 048693 82 LAIE----KGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEID 157 (539)
Q Consensus 82 ~~~~----~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~ 157 (539)
++.. ++.++++++.++..+||++||+.|.+++.+++.++++.++..+++.+.+|++++|++|+.|+...+..+.++
T Consensus 205 ~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~ 284 (383)
T 1dkg_D 205 IEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLP 284 (383)
T ss_dssp EEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred EEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEe
Confidence 9998 578889988888999999999999999999999888888888899999999999999999999888777776
Q ss_pred cccC---C-ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccc
Q 048693 158 SLYE---G-IDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCK 233 (539)
Q Consensus 158 ~~~~---~-~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~ 233 (539)
.+.+ | .++..+|+|++|+++++++++++.+.|++.|++++....+++.|+|+||+|++|+|++.|++.| +.++..
T Consensus 285 ~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~ 363 (383)
T 1dkg_D 285 YITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRK 363 (383)
T ss_dssp EEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBC
T ss_pred cccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCC
Confidence 5433 2 4566799999999999999999999999999999887788999999999999999999999999 577888
Q ss_pred cCCcchhhhchHHHHHHHH
Q 048693 234 NINPDEAVAYGAAVQAAVL 252 (539)
Q Consensus 234 ~~~p~~avA~GAal~a~~~ 252 (539)
+.||+++||+||+++|+.+
T Consensus 364 ~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 364 DVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp SSCTTTHHHHHHHHHTTTT
T ss_pred CcChHHHHHHHHHHHHHhh
Confidence 9999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.98 E-value=3.8e-32 Score=277.13 Aligned_cols=222 Identities=23% Similarity=0.362 Sum_probs=185.5
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeee
Q 048693 11 VSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFK 90 (539)
Q Consensus 11 v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~ 90 (539)
...+|||||++|++.||+++++|++.||++.+.+++||+|||++|+.... .+..++|||+||||||+++++.+...
T Consensus 95 ~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~--~~~~~lVvDiGggttdvsv~~~~~~~-- 170 (344)
T 1jce_A 95 KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVE--EPSGNMVVDIGGGTTEVAVISLGSIV-- 170 (344)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT--SSSCEEEEEECSSCEEEEEEETTEEE--
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC--CCceEEEEEeCCCeEEEEEEEcCCEE--
Confidence 47899999999999999999999999999999999999999999987654 36789999999999999999864322
Q ss_pred EEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCe------EEEEEc--cccCC
Q 048693 91 VKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQ------TTIEID--SLYEG 162 (539)
Q Consensus 91 v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~------~~~~i~--~~~~~ 162 (539)
..++..+||++||+.|.+++.+++ +.++. .+++|++|+.++.... ..+.+. .+.+|
T Consensus 171 ---~~~~~~lGG~~id~~l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g 234 (344)
T 1jce_A 171 ---TWESIRIAGDEMDEAIVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTG 234 (344)
T ss_dssp ---EEEEESCSHHHHHHHHHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTT
T ss_pred ---eeCCCCccChhHHHHHHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCC
Confidence 245678999999999999997654 22221 3689999999986542 234443 34467
Q ss_pred ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCCC-CeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcch
Q 048693 163 IDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTD--KSSV-DDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDE 239 (539)
Q Consensus 163 ~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~ 239 (539)
.+..++|+|++|++++++.++++.+.|++.|++++.. .+.+ +.|+|+||+|++|+|++.|++.| +.++....||++
T Consensus 235 ~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ 313 (344)
T 1jce_A 235 LPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLT 313 (344)
T ss_dssp EEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTT
T ss_pred CceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHH
Confidence 7778999999999999999999999999999977532 1224 68999999999999999999999 577888889999
Q ss_pred hhhchHHHHHHHHc
Q 048693 240 AVAYGAAVQAAVLS 253 (539)
Q Consensus 240 avA~GAal~a~~~~ 253 (539)
+||+||++++..++
T Consensus 314 ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 314 AVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHhChH
Confidence 99999999987554
No 11
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=4.1e-24 Score=210.34 Aligned_cols=189 Identities=23% Similarity=0.359 Sum_probs=160.9
Q ss_pred hhhhhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEE
Q 048693 3 AEDYVGSPVSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLL 82 (539)
Q Consensus 3 ae~~~g~~v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~ 82 (539)
++.+.+.++..+++|+|+.|+..+|+.++++++.+|++...++.||+|++++++.. ..+|+|+|||||+++++
T Consensus 84 ~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~viDiGggst~~~~~ 156 (272)
T 3h1q_A 84 VERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGIVVDIGGGTTGIAVI 156 (272)
T ss_dssp HHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEEEEEECSSCEEEEEE
T ss_pred HHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEEEEEECCCcEEEEEE
Confidence 55667888999999999999999999999999999999999999999999998753 25999999999999998
Q ss_pred EEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccccCC
Q 048693 83 AIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSLYEG 162 (539)
Q Consensus 83 ~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~~~~ 162 (539)
. ++... .....++||.+||+.|.+++.. + .+++|++|+.++
T Consensus 157 ~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~~--------~-----------~~~ae~~k~~~~--------------- 197 (272)
T 3h1q_A 157 E--KGKIT---ATFDEPTGGTHLSLVLAGSYKI--------P-----------FEEAETIKKDFS--------------- 197 (272)
T ss_dssp E--TTEEE---EECCBSCCHHHHHHHHHHHHTC--------C-----------HHHHHHHHHSST---------------
T ss_pred E--CCEEE---EEecCCCcHHHHHHHHHHHhCC--------C-----------HHHHHHHHHhcC---------------
Confidence 7 33321 3467899999999999887731 1 267888898865
Q ss_pred ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhh
Q 048693 163 IDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVA 242 (539)
Q Consensus 163 ~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA 242 (539)
+++++++++.+.++++.+.+.+.+++.+ +++.|+|+||++++|++++.+++.| +.++..+.||++++|
T Consensus 198 -------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~p~~a~a 265 (272)
T 3h1q_A 198 -------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIHPLLVTP 265 (272)
T ss_dssp -------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSSGGGHHH
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-CCCccccCChHHHHH
Confidence 5889999999999999999999988653 4789999999999999999999999 688888999999999
Q ss_pred chHHHHH
Q 048693 243 YGAAVQA 249 (539)
Q Consensus 243 ~GAal~a 249 (539)
+|||++|
T Consensus 266 ~Gaal~a 272 (272)
T 3h1q_A 266 LGIALFG 272 (272)
T ss_dssp HHHHTTC
T ss_pred HHHHhcC
Confidence 9999864
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.88 E-value=6.6e-23 Score=212.91 Aligned_cols=200 Identities=15% Similarity=0.146 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcHHH
Q 048693 25 SQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGED 104 (539)
Q Consensus 25 ~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~ 104 (539)
...+.+.++++.||+++..++.||.|||++++.+.. +...++|||+||||||+++++ ++.+.. .+..++||++
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~--~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~ 240 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE--KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKH 240 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH--HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc--ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHH
Confidence 456789999999999999999999999999865443 256799999999999999998 444322 3457899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCC-----CeEEEEEccccCCceeEEEEeHHHHHHHHH
Q 048693 105 FDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSST-----SQTTIEIDSLYEGIDFSSVITRARFEELNM 179 (539)
Q Consensus 105 id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~-----~~~~~~i~~~~~~~~~~~~itr~e~e~~~~ 179 (539)
||+.|+..+.. ..++||++|..++.. ....+.++... .....++++++++++++
T Consensus 241 it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ii~ 299 (419)
T 4a2a_A 241 VIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSVIIH 299 (419)
T ss_dssp HHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHHHHH
Confidence 99999876521 137899999998642 34456666543 24567899999999999
Q ss_pred HHHHHHHHHHHHHHHhCCC------CCCCCCeEEEEcCCCChHHHHHHHHHHhCCCccccc-----------------CC
Q 048693 180 DLFRKCIKHVDMCLRTGKT------DKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKN-----------------IN 236 (539)
Q Consensus 180 ~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~-----------------~~ 236 (539)
+.++++.+.|++.|+.++. ....++.|+|+||+|++|+|++.+++.| +.+++.. .+
T Consensus 300 p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~~ 378 (419)
T 4a2a_A 300 ARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVAND 378 (419)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccCC
Confidence 9999999999999998876 3456899999999999999999999999 5555422 38
Q ss_pred cchhhhchHHHHHHHHc
Q 048693 237 PDEAVAYGAAVQAAVLS 253 (539)
Q Consensus 237 p~~avA~GAal~a~~~~ 253 (539)
|..+.+.|.++++....
T Consensus 379 P~~~t~~Gl~~~~~~~~ 395 (419)
T 4a2a_A 379 PSFAAAFGNVFAVSENP 395 (419)
T ss_dssp GGGHHHHHTTCC-----
T ss_pred chHHHHHHHHHHHhhcc
Confidence 89999999999886554
No 13
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.88 E-value=3.1e-23 Score=213.89 Aligned_cols=212 Identities=19% Similarity=0.204 Sum_probs=146.2
Q ss_pred hhhhhhCCCCCcEEEEeCCCCCH------------------HHHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCC
Q 048693 2 IAEDYVGSPVSNAVVTVPAYFTN------------------SQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAAS 63 (539)
Q Consensus 2 ~ae~~~g~~v~~vvitVP~~~~~------------------~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~ 63 (539)
.|+.+++.++++.+|++|..=.. ...+.++++++.||++...++.||.|||.+|+.......
T Consensus 110 ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~ 189 (377)
T 2ych_A 110 EAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEP 189 (377)
T ss_dssp HHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTST
T ss_pred HHhhcCCCChhHceEEEEEeCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccccc
Confidence 37789999999999999832111 123889999999999999999999999999865433334
Q ss_pred CceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 048693 64 EKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAK 143 (539)
Q Consensus 64 ~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K 143 (539)
+..++|+|+||||||+++++. +... ..++..+||++||+.|++.+ +.+ +.+||++|
T Consensus 190 ~~~~~vvDiGggttdi~i~~~--g~~~---~~~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K 245 (377)
T 2ych_A 190 DRVFLVLDIGAESTSLVLLRG--DKPL---AVRVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVK 245 (377)
T ss_dssp TCEEEEEEECSSCEEEEEEET--TEEE---EEEEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHH
T ss_pred CCeEEEEEECCCcEEEEEEEC--CEEE---EEEeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHH
Confidence 677999999999999999973 3321 24567899999999987633 221 36889999
Q ss_pred HHcCCCCeEEEEEccccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCeEEEEcCCCChHHHHHH
Q 048693 144 RTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTG--KTDKSSVDDVVIVGGSARIPKVQQL 221 (539)
Q Consensus 144 ~~ls~~~~~~~~i~~~~~~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~~p~i~~~ 221 (539)
+.++.........+...+-......++++++++++++.++++.+.|++.|+.. +.....++.|+|+||++++|++++.
T Consensus 246 ~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~ 325 (377)
T 2ych_A 246 RTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASL 325 (377)
T ss_dssp HHTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHH
T ss_pred hhcccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHH
Confidence 99875432211100000111134578999999999999999999999999853 4455678999999999999999999
Q ss_pred HHHHhCCCcccccCCcch
Q 048693 222 LQEFFNGKRLCKNINPDE 239 (539)
Q Consensus 222 l~~~f~~~~v~~~~~p~~ 239 (539)
+++.| +.++... ||++
T Consensus 326 l~~~l-~~~v~~~-~P~~ 341 (377)
T 2ych_A 326 LTDTL-GVNLEPV-NPWE 341 (377)
T ss_dssp HHHHH-TSEEEEC-CGGG
T ss_pred HHHHh-CCCeEec-Cchh
Confidence 99999 5555443 4433
No 14
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.88 E-value=5.9e-23 Score=208.68 Aligned_cols=202 Identities=17% Similarity=0.164 Sum_probs=153.7
Q ss_pred CcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeeeechhHHHHHHhccccc--cCCCceEEEEEeC
Q 048693 12 SNAV--VTVPAYFTNSQRQATKDAGAMA--------G------LNVLNIISEPTAAAIACGLDRK--AASEKNVLIFDLG 73 (539)
Q Consensus 12 ~~vv--itVP~~~~~~~r~~l~~aa~~A--------G------l~~~~li~Ep~AAa~~~~~~~~--~~~~~~vlvvDiG 73 (539)
.++| ++||++++..||+++++++..+ | ++.+.+++||.|||+++ ++.. ..+...++|||+|
T Consensus 120 ~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~-l~~~~~~~~~~~vlVvDIG 198 (346)
T 2fsj_A 120 VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYL-LNQGIIEQQPGYGVVIDVG 198 (346)
T ss_dssp EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHH-HHHTSSCCCSSEEEEEEEC
T ss_pred eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHh-hccccccccCCcEEEEECC
Confidence 5699 9999999999999999997765 4 35689999999999988 2221 1134678999999
Q ss_pred CceeEEEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHcCCCCe
Q 048693 74 GGTFDVSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEK--DISGSPRAAQRLRKNCERAKRTLSSTSQ 151 (539)
Q Consensus 74 ggTtdisv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~--~~~~~~~~~~rL~~~~e~~K~~ls~~~~ 151 (539)
|||||+++++++++. .+....++..+||+++++.|.+++.+++ +. .+. .+.+| ...
T Consensus 199 gGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~----g~~~~i~---------~~~~e-------~~~- 256 (346)
T 2fsj_A 199 SRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKET----GFVVPFD---------LAQEA-------LSH- 256 (346)
T ss_dssp SSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHH----CCCCCHH---------HHHHH-------TTS-
T ss_pred CCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHh----CCCcCCC---------HHHHh-------cCC-
Confidence 999999999987665 4454467789999999999988876554 33 211 01222 111
Q ss_pred EEEEEccccCCceeEEEEeHHHH-HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCc
Q 048693 152 TTIEIDSLYEGIDFSSVITRARF-EELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKR 230 (539)
Q Consensus 152 ~~~~i~~~~~~~~~~~~itr~e~-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~ 230 (539)
.+.+ .|. .++++++ ++++++++++|.+.|++.|++. .++++.|+|+||+|++ +++.|++.|+...
T Consensus 257 -~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~ 322 (346)
T 2fsj_A 257 -PVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTL 322 (346)
T ss_dssp -CEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCB
T ss_pred -eEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcE
Confidence 1222 232 3558899 9999999999999999999865 3467999999999998 9999999996322
Q ss_pred c-cccCCcchhhhchHHHHHH
Q 048693 231 L-CKNINPDEAVAYGAAVQAA 250 (539)
Q Consensus 231 v-~~~~~p~~avA~GAal~a~ 250 (539)
+ ....||++++|+|+..++.
T Consensus 323 i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 323 VKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp CCCCTTTTTTHHHHHHHHHHH
T ss_pred EeccCCCcHHHHHHHHHHHHh
Confidence 2 1267999999999998764
No 15
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.82 E-value=2e-20 Score=192.45 Aligned_cols=219 Identities=14% Similarity=0.187 Sum_probs=151.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeee
Q 048693 12 SNAVVTVPAYFTNSQRQATKDAG-AMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFK 90 (539)
Q Consensus 12 ~~vvitVP~~~~~~~r~~l~~aa-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~ 90 (539)
..++||+|++++..+|+++.+++ +.+|++.+.+++||.|||++++. ...+|||+|+|||+++.+. ++. .
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~lVvDiG~gtt~v~~v~--~G~-~ 170 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVTHNVPIY--EGY-A 170 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEEEEEECSSCEEEEEEE--TTE-E
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC-------CeEEEEEcCCCceEEeEeE--CCE-E
Confidence 45999999999999999998765 77899999999999999999874 3579999999999998775 443 2
Q ss_pred EEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHH---------HHHHHHcCCCCeEEEEEccc
Q 048693 91 VKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISG--SPRAAQRLRKNC---------ERAKRTLSSTSQTTIEIDSL 159 (539)
Q Consensus 91 v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~--~~~~~~rL~~~~---------e~~K~~ls~~~~~~~~i~~~ 159 (539)
+....+..++||+++|+.|.+++..+ +..+.. +.....+|+... +..|..++......+.++
T Consensus 171 ~~~~~~~~~~GG~~lt~~l~~~l~~~-----~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp-- 243 (375)
T 2fxu_A 171 LPHAIMRLDLAGRDLTDYLMKILTER-----GYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP-- 243 (375)
T ss_dssp CGGGCEEESCCHHHHHHHHHHHHHHH-----TCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT--
T ss_pred eccceEEeccCHHHHHHHHHHHHHhc-----CCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC--
Confidence 22223457899999999999999654 111211 112222332221 111222223333444443
Q ss_pred cCCceeEEEEeHHHHH---HHHHHH-----HHHHHHHHHHHHHhCCCC--CCCCCeEEEEcCCCChHHHHHHHHHHhCC-
Q 048693 160 YEGIDFSSVITRARFE---ELNMDL-----FRKCIKHVDMCLRTGKTD--KSSVDDVVIVGGSARIPKVQQLLQEFFNG- 228 (539)
Q Consensus 160 ~~~~~~~~~itr~e~e---~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~i~~~l~~~f~~- 228 (539)
+|. .++++++.|+ .+++|. ...|.+.|.+.|++.... ...++.|+|+||+|++|+++++|++.+..
T Consensus 244 -dg~--~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~ 320 (375)
T 2fxu_A 244 -DGQ--VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL 320 (375)
T ss_dssp -TSC--EEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHH
T ss_pred -CCC--EEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHh
Confidence 332 3567777663 333332 245778888888765321 23357899999999999999999988731
Q ss_pred ------CcccccCCcchhhhchHHHHHH
Q 048693 229 ------KRLCKNINPDEAVAYGAAVQAA 250 (539)
Q Consensus 229 ------~~v~~~~~p~~avA~GAal~a~ 250 (539)
.++..+.+|..++++|++++|.
T Consensus 321 ~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 321 APSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp SCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred CCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 3455677999999999999997
No 16
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.82 E-value=5.2e-20 Score=192.31 Aligned_cols=225 Identities=17% Similarity=0.149 Sum_probs=160.5
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHH-h---ccccccCCCceEEEEEeCCceeEEEEEEEe
Q 048693 11 VSNAVVTVPAYFTNSQRQATKDAG-AMAGLNVLNIISEPTAAAIA-C---GLDRKAASEKNVLIFDLGGGTFDVSLLAIE 85 (539)
Q Consensus 11 v~~vvitVP~~~~~~~r~~l~~aa-~~AGl~~~~li~Ep~AAa~~-~---~~~~~~~~~~~vlvvDiGggTtdisv~~~~ 85 (539)
...+|||+|++|+..+|++|.+++ +.+|++.+.+++||.||+++ | ++... +...+|||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~---~~~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER---TLTGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC---CCCEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC---CCeEEEEEcCCCceEEEEeE--
Confidence 357999999999999999999999 88999999999999999988 3 22211 22679999999999999986
Q ss_pred cCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCC---------------
Q 048693 86 KGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTS--------------- 150 (539)
Q Consensus 86 ~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~--------------- 150 (539)
++.. +....+..++||+++|+.|.+++.+++ ..+... .-...+|++|+.+....
T Consensus 182 ~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~-----~~~~~~-----~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGYV-IGSCIKHIPIAGRDITYFIQQLLRDRE-----VGIPPE-----QSLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTC-----CCCCGG-----GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCEE-cccceEEEeCcHHHHHHHHHHHHHhcC-----CCCCCH-----HHHHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 3331 222235578999999999999986432 111100 01245677777764321
Q ss_pred --eEEEEEccccCCceeEEEEeHHHH---HHHHHHH------HHHHHHHHHHHHHhCCCC--CCCCCeEEEEcCCCChHH
Q 048693 151 --QTTIEIDSLYEGIDFSSVITRARF---EELNMDL------FRKCIKHVDMCLRTGKTD--KSSVDDVVIVGGSARIPK 217 (539)
Q Consensus 151 --~~~~~i~~~~~~~~~~~~itr~e~---e~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~ 217 (539)
...+.++....+....+++++++| |.+++|. +..|.+.|.+.|++.... ...++.|+|+||+|++|+
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 134566554455666788999988 4444442 246888888888876532 344678999999999999
Q ss_pred HHHHHHHHhCC-----------------------CcccccCCcchhhhchHHHHHHH
Q 048693 218 VQQLLQEFFNG-----------------------KRLCKNINPDEAVAYGAAVQAAV 251 (539)
Q Consensus 218 i~~~l~~~f~~-----------------------~~v~~~~~p~~avA~GAal~a~~ 251 (539)
+++.|++.+.. .++..+.+|..++.+|++++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99998876521 12333457789999999998863
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.75 E-value=6.5e-19 Score=177.25 Aligned_cols=203 Identities=17% Similarity=0.202 Sum_probs=138.9
Q ss_pred cEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCc
Q 048693 13 NAVVTVPAY-FTNS--QR--QATKDA------------GAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGG 75 (539)
Q Consensus 13 ~vvitVP~~-~~~~--~r--~~l~~a------------a~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGgg 75 (539)
.+|+++|.. |... |+ +++.+- .+.+++..+.+++||.||+++++.... ++..++|+|+|||
T Consensus 97 ~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~~--~~~~~~vvDiGgg 174 (320)
T 2zgy_A 97 DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELD--ELDSLLIIDLGGT 174 (320)
T ss_dssp EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHSC--TTCEEEEEEECSS
T ss_pred EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhcccc--CCCCEEEEEcCCC
Confidence 699999987 6431 11 222221 123455788999999999998863322 3678999999999
Q ss_pred eeEEEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHcCCCCeEEE
Q 048693 76 TFDVSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERA-KRTLSSTSQTTI 154 (539)
Q Consensus 76 Ttdisv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~-K~~ls~~~~~~~ 154 (539)
|||+++++ ++...+....++..+||.+||+.|.+++.+ + +.++ +. ..+|++ |..- ...
T Consensus 175 ttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~----~-~~~i--~~-------~~ae~~lk~~~---~~~-- 233 (320)
T 2zgy_A 175 TLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL----A-RTKG--SS-------YLADDIIIHRK---DNN-- 233 (320)
T ss_dssp CEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC----C-SBGG--GH-------HHHHHHHHTTT---CHH--
T ss_pred eEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH----c-CCCC--CH-------HHHHHHHHHhh---hhh--
Confidence 99999998 555556666777899999999999988843 1 2221 11 234444 3320 000
Q ss_pred EEccccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCC--ccc
Q 048693 155 EIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGK--RLC 232 (539)
Q Consensus 155 ~i~~~~~~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~--~v~ 232 (539)
......+ . .-+.+++.+++++.++++.+.|.+.+++. .+++.|+|+||+|++ +++.|++.|+.. ++.
T Consensus 234 ~~~~~i~---~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~ 302 (320)
T 2zgy_A 234 YLKQRIN---D--ENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFF 302 (320)
T ss_dssp HHHHHSS---S--SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEE
T ss_pred cccceec---C--chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChHHH--HHHHHHHHhCCCCCcee
Confidence 0000000 0 11345667777788888887777777652 468999999999987 999999999532 577
Q ss_pred ccCCcchhhhchHHHHH
Q 048693 233 KNINPDEAVAYGAAVQA 249 (539)
Q Consensus 233 ~~~~p~~avA~GAal~a 249 (539)
...||++|+|+||++++
T Consensus 303 ~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 303 KTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCSCGGGHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHhc
Confidence 78899999999999875
No 18
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.62 E-value=3e-16 Score=159.33 Aligned_cols=205 Identities=14% Similarity=0.225 Sum_probs=139.7
Q ss_pred CcEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeeeechhHHHHHHhccccccC----CCceEEEEEeCC
Q 048693 12 SNAVVTVPAYFTNSQR-QATKDAGAMAGL------------NVLNIISEPTAAAIACGLDRKAA----SEKNVLIFDLGG 74 (539)
Q Consensus 12 ~~vvitVP~~~~~~~r-~~l~~aa~~AGl------------~~~~li~Ep~AAa~~~~~~~~~~----~~~~vlvvDiGg 74 (539)
..+++++|..+...+| +++++++..++- ..+.+++||.||+++++++.... .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3799999999888887 589998875543 57899999999999987654211 378899999999
Q ss_pred ceeEEEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEE
Q 048693 75 GTFDVSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTI 154 (539)
Q Consensus 75 gTtdisv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~ 154 (539)
||||++++. ++.. +....+...+||..+++++.+++.+++. +..+. . +..++.+. +
T Consensus 194 gTtd~~v~~--~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~---------~ 249 (355)
T 3js6_A 194 GTTIIDTYQ--NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE---------Y 249 (355)
T ss_dssp SCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC----------
T ss_pred CcEEEEEEc--CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc---------c
Confidence 999999993 3332 1112344679999999999999966531 11111 1 11111110 0
Q ss_pred EEccccCCce--eEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHH--HHHHHHHHhCCCc
Q 048693 155 EIDSLYEGID--FSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPK--VQQLLQEFFNGKR 230 (539)
Q Consensus 155 ~i~~~~~~~~--~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--i~~~l~~~f~~~~ 230 (539)
.. .+.+ -...++ +.+++++++++++|.+.|++.+.+ .+.++.|+|+||+|.++. |++.|++.|+..
T Consensus 250 ~~----~~~~~~k~~di~-~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 250 KQ----CKLNQKTVIDFK-DEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------CH-HHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred cc----ccccccccccHH-HHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 00 0000 011222 346777777888888888777753 356799999999999988 889999888432
Q ss_pred ccccCCcchhhhchHHHHHHHHcC
Q 048693 231 LCKNINPDEAVAYGAAVQAAVLSG 254 (539)
Q Consensus 231 v~~~~~p~~avA~GAal~a~~~~~ 254 (539)
.||++|+|+|+..++..+.+
T Consensus 320 ----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHHh
Confidence 79999999999999987764
No 19
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.55 E-value=1.2e-15 Score=157.64 Aligned_cols=214 Identities=15% Similarity=0.179 Sum_probs=86.7
Q ss_pred cEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeE
Q 048693 13 NAVVTVPAYFTNSQRQATKDAG-AMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKV 91 (539)
Q Consensus 13 ~vvitVP~~~~~~~r~~l~~aa-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v 91 (539)
.++||+|+..+..+|+++.+++ +.+|++.+.+++||.||+++++. ...+|||+|+|||+++.+. ++.. +
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~--~G~~-~ 175 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVY--EGFS-L 175 (394)
T ss_dssp -------------------------------------------------------CCEEEECSSCEEEECEE--TTEE-C
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeE--CCEE-c
Confidence 4999999999999999998865 77899999999999999999874 3459999999999998885 3432 1
Q ss_pred EEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCC----------------CCeEEEE
Q 048693 92 KATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSS----------------TSQTTIE 155 (539)
Q Consensus 92 ~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~----------------~~~~~~~ 155 (539)
.......++||+++|+.|.+++..+ .+......... .+|++|+.+.. .....+.
T Consensus 176 ~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~~-------~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~ 245 (394)
T 1k8k_B 176 PHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADFE-------TVRMIKEKLCYVGYNIEQEQKLALETTVLVESYT 245 (394)
T ss_dssp STTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTHH-------HHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred ccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHHH-------HHHHHHHhheeEecCHHHHHHhhccCCcCceEEE
Confidence 1112346899999999999998643 11111112222 34444444321 1122333
Q ss_pred EccccCCceeEEEEeHHHHH---HHHHHH-----HHHHHHHHHHHHHhCCCCC--CCCCeEEEEcCCCChHHHHHHHHHH
Q 048693 156 IDSLYEGIDFSSVITRARFE---ELNMDL-----FRKCIKHVDMCLRTGKTDK--SSVDDVVIVGGSARIPKVQQLLQEF 225 (539)
Q Consensus 156 i~~~~~~~~~~~~itr~e~e---~~~~~~-----~~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~i~~~l~~~ 225 (539)
++ +|. .++++.+.|. .+++|- ...|.+.|.+.|.+...+. .-.+.|+|+||+|++|++.++|++.
T Consensus 246 lp---dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 246 LP---DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp CT---TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred CC---CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 32 333 3556766552 222331 2456777888887764332 2347899999999999999999887
Q ss_pred hCC------------------CcccccCCcchhhhchHHHHHHH
Q 048693 226 FNG------------------KRLCKNINPDEAVAYGAAVQAAV 251 (539)
Q Consensus 226 f~~------------------~~v~~~~~p~~avA~GAal~a~~ 251 (539)
+.. .++..+.+|..++.+|++++|..
T Consensus 321 l~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 321 LKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 621 12233557789999999998864
No 20
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.53 E-value=6.3e-15 Score=148.32 Aligned_cols=206 Identities=14% Similarity=0.176 Sum_probs=142.7
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeeeechhHHHHHHhccccccCCCceEEEEEeCCc
Q 048693 12 SNAVVTVPAYFTN--SQRQATKDAGAMA--------G------LNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGG 75 (539)
Q Consensus 12 ~~vvitVP~~~~~--~~r~~l~~aa~~A--------G------l~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGgg 75 (539)
..+++++|..+.. .+|+.+++....- | ++.+.+++|+.+|.+... . ..++..++|+|+|||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~--~~~~~~v~vvDiGgg 182 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-E--NFKNKNVAVIDFGGL 182 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-C--CCTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-h--hhccCCEEEEEeCCC
Confidence 4799999987764 3677787765521 1 245788999999887652 1 224788999999999
Q ss_pred eeEEEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEE
Q 048693 76 TFDVSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIE 155 (539)
Q Consensus 76 Ttdisv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~ 155 (539)
|||++++. ++.. +....+...+||..++++|.+.+.. .+++..+.. ..+|++|+. .. . .
T Consensus 183 Ttd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~-g~---~--~ 241 (329)
T 4apw_A 183 NMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN-GY---M--K 241 (329)
T ss_dssp CEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS-CS---S--C
T ss_pred cEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc-CC---c--c
Confidence 99999998 3332 1122345779999999999888743 033433322 233444432 11 0 0
Q ss_pred EccccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccC
Q 048693 156 IDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNI 235 (539)
Q Consensus 156 i~~~~~~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~ 235 (539)
.+.++. .+..+++++.+++++++|.+.|++. . .+...++.|+|+||+|.+ +.+.|++.|+ .++....
T Consensus 242 -----~g~~~~-~~~~~~i~~~~~e~~~~I~~~i~~~-~---~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v~~ 308 (329)
T 4apw_A 242 -----KGGEID-TESSTVIKKVKEKFLKDAIKLIEKR-G---FKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSIITN 308 (329)
T ss_dssp -----EECTTC-CSTTHHHHHHHHHHHHHHHHHHHHH-T---CCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEECCS
T ss_pred -----cCCcch-hHHHHHHHHHHHHHHHHHHHHHHHc-C---CCHHHccEEEEECChHHH--HHHHHHHHcC-CCCEecC
Confidence 011111 3456778888888888888888776 3 334457999999999987 6799999994 5677888
Q ss_pred CcchhhhchHHHHHHHHcC
Q 048693 236 NPDEAVAYGAAVQAAVLSG 254 (539)
Q Consensus 236 ~p~~avA~GAal~a~~~~~ 254 (539)
||.+|+|+|+..++...-+
T Consensus 309 ~P~~a~a~G~~~~~~~k~~ 327 (329)
T 4apw_A 309 NSQWTTCEGLYKVAVAKYC 327 (329)
T ss_dssp SGGGHHHHHHHHHHHHHHC
T ss_pred CChhhHHHHHHHHHhhhhc
Confidence 9999999999998876554
No 21
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.51 E-value=2.9e-15 Score=119.09 Aligned_cols=67 Identities=16% Similarity=0.255 Sum_probs=59.2
Q ss_pred CCcccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccCCCCCCceeecCCCCcccCccccCCCCc
Q 048693 331 CNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPADGFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 331 C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
|+..||+.|+.+ |..+.||.|++|+|+|...+ . +.|++|++...+|+|+|..|+|+||+.||.+|..
T Consensus 15 ~~~~lhe~Ca~l--P~~i~Hp~Hp~H~L~L~~~~-~----------~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~~ 81 (89)
T 1v5n_A 15 IEAKYDEIAKDW--PKKVKHVLHEEHELELTRVQ-V----------YTCDKCEEEGTIWSYHCDECDFDLHAKCALNEDT 81 (89)
T ss_dssp HHHHHHHHTSSS--CSEECCSTTTTSCEEEECCS-S----------CCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSSC
T ss_pred HHHHHhHHHHcC--CceecCCCCCCCccEEeeCC-C----------eEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCCc
Confidence 356899999998 45589999889999998763 2 7899999999999999999999999999998875
No 22
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.46 E-value=6.6e-13 Score=130.40 Aligned_cols=195 Identities=19% Similarity=0.197 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHcCC-------------------ceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEe
Q 048693 25 SQRQATKDAGAMAGL-------------------NVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIE 85 (539)
Q Consensus 25 ~~r~~l~~aa~~AGl-------------------~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~ 85 (539)
...+.++++.+.+|. ..+..|+|++|+++++..... ....|+|+|||+++++++. .
T Consensus 38 ~a~~vl~~~~~~a~~~~~~~~~~a~t~~~~~a~~~~~~~Vne~~aha~a~~~~~~----~~~~vl~lgG~~~~~~~~~-~ 112 (276)
T 4ehu_A 38 GPSRVLEKLYGKTGLAREDIKKVVVTGYGRMNYSDADKQISELSCHARGVNFIIP----ETRTIIDIGGQDAKVLKLD-N 112 (276)
T ss_dssp HHHHHHHHHHHHHCCCGGGEEEEEEESTTGGGCCSCSEECCHHHHHHHHHHHHST----TCCEEEEECSSCEEEEEEC-T
T ss_pred HHHHHHHHHHHHCCCcchhccccccCchHHHHhhCCCcccchHHHHHHHHHHhCC----CCCeEEEEcCCCceEEEEE-e
Confidence 345577777777765 347889999999988765433 3457899999999998884 4
Q ss_pred cCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccccCCcee
Q 048693 86 KGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSLYEGIDF 165 (539)
Q Consensus 86 ~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~ 165 (539)
++.++....++....|+.++++.+++++...+.+.. .+ .+....... +.+ ....+
T Consensus 113 ~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~------------~~---------~~~a~~~~~--i~~--~~~~f 167 (276)
T 4ehu_A 113 NGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELG------------SI---------SMNSQNEVS--ISS--TCTVF 167 (276)
T ss_dssp TSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHH------------HH---------HTTCSSCCC--CCC--CSHHH
T ss_pred cCceEEEEeCCCcCcchhhHHHHHHHHhccChhhhH------------HH---------HhcCCCCCC--cCC--ccchh
Confidence 667788888888899999999998888743322110 00 000000000 000 00000
Q ss_pred E------EEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcch
Q 048693 166 S------SVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDE 239 (539)
Q Consensus 166 ~------~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~ 239 (539)
. ..-.....++++..+.+.+.+.+.....+. ..++.|+|+||.+++|.|++.+++.| +.++..+.+|++
T Consensus 168 ~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~ 242 (276)
T 4ehu_A 168 AESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQL 242 (276)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGG
T ss_pred hhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcch
Confidence 0 000001134555555555555555444432 35689999999999999999999999 788999999999
Q ss_pred hhhchHHHHHHHHcC
Q 048693 240 AVAYGAAVQAAVLSG 254 (539)
Q Consensus 240 avA~GAal~a~~~~~ 254 (539)
++|+|||++|.....
T Consensus 243 ~~A~GAAl~A~~~~~ 257 (276)
T 4ehu_A 243 TGALGAALYAFDEAK 257 (276)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999976653
No 23
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.39 E-value=1.2e-13 Score=109.71 Aligned_cols=59 Identities=27% Similarity=0.628 Sum_probs=52.5
Q ss_pred cccCCCCCCCCcccccccccccCCCCcCCCCccCCCCCCceecCCCCcccccccccCCCC
Q 048693 286 AQNLPSRGGHTSHQAHYLQLKNHKTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFIYRK 345 (539)
Q Consensus 286 ~q~~p~~~~h~sHp~H~L~l~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~p~~ 345 (539)
-.++|..+.|++||+|||+|.... ++.|++|++.+.+.+|+|..|||+||..||..|++
T Consensus 23 Ca~lP~~i~Hp~Hp~H~L~L~~~~-~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~~ 81 (89)
T 1v5n_A 23 AKDWPKKVKHVLHEEHELELTRVQ-VYTCDKCEEEGTIWSYHCDECDFDLHAKCALNEDT 81 (89)
T ss_dssp TSSSCSEECCSTTTTSCEEEECCS-SCCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSSC
T ss_pred HHcCCceecCCCCCCCccEEeeCC-CeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCCc
Confidence 346788899999999999998754 78999999999999999999999999999988644
No 24
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.37 E-value=2.6e-13 Score=139.13 Aligned_cols=197 Identities=21% Similarity=0.217 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHc-CC--ceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcH
Q 048693 26 QRQATKDAGAMA-GL--NVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGG 102 (539)
Q Consensus 26 ~r~~l~~aa~~A-Gl--~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG 102 (539)
+-+.+.++.+.+ |+ +.-. .||.||+++.+..... +..++++||||||||++++.-+...+ ......||
T Consensus 369 ~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~--eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~gG 439 (610)
T 2d0o_A 369 QMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGT--TRPLAILDLGAGSTDASIINPKGDII-----ATHLAGAG 439 (610)
T ss_dssp CHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTC--CSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECSH
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC--cCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccch
Confidence 456788888999 99 6656 9999999999776664 88899999999999999997444332 33357899
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCC----------CeEEEEE--ccccC---Cc----
Q 048693 103 EDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSST----------SQTTIEI--DSLYE---GI---- 163 (539)
Q Consensus 103 ~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~----------~~~~~~i--~~~~~---~~---- 163 (539)
++++..|+.-|.-. + +..||+.|. .... +...+.+ +.+.. ..
T Consensus 440 ~~VT~DIA~~Lgt~-------d-----------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~~ 500 (610)
T 2d0o_A 440 DMVTMIIARELGLE-------D-----------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVV 500 (610)
T ss_dssp HHHHHHHHHHHTCC-------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEE
T ss_pred HHHHHHHHHHhCCC-------C-----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecc
Confidence 99999988777321 0 168899999 5321 1223444 22211 01
Q ss_pred --eeEEEEeHHH--HHHHHHHHHHHHHHH--HHHHHHhCC-----CCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCccc
Q 048693 164 --DFSSVITRAR--FEELNMDLFRKCIKH--VDMCLRTGK-----TDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLC 232 (539)
Q Consensus 164 --~~~~~itr~e--~e~~~~~~~~~i~~~--i~~~l~~~~-----~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~ 232 (539)
+.-..| +.+ +|+ ++-+-+++.+. ++..|+..+ .+..+|..|+|+||+|.++.+.++.++.|+..+++
T Consensus 501 ~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VR 578 (610)
T 2d0o_A 501 KADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLV 578 (610)
T ss_dssp CSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCE
T ss_pred cccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeE
Confidence 111244 455 665 44444443333 122244322 13467799999999999999999999999541322
Q ss_pred -------ccCCcchhhhchHHHHHHHH
Q 048693 233 -------KNINPDEAVAYGAAVQAAVL 252 (539)
Q Consensus 233 -------~~~~p~~avA~GAal~a~~~ 252 (539)
...+|..|+|.|.+++-+..
T Consensus 579 iGrP~~~gv~gP~fAtAvGLlly~~~~ 605 (610)
T 2d0o_A 579 AGRGNIRGSEGPRNAVATGLILSWHKE 605 (610)
T ss_dssp EEECCGGGTSTTSCHHHHHHHHHHHHH
T ss_pred EecCCccccCCCcHHHHHHHHHHHhhh
Confidence 24589999999999876543
No 25
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.36 E-value=3.1e-13 Score=139.18 Aligned_cols=193 Identities=21% Similarity=0.187 Sum_probs=129.3
Q ss_pred HHHHHHHHHc-CC--ceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcHHH
Q 048693 28 QATKDAGAMA-GL--NVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGED 104 (539)
Q Consensus 28 ~~l~~aa~~A-Gl--~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~ 104 (539)
+.+.++.+.+ |+ +.-. .||.||+++.+..... +..++++||||||||++++.-+...+ ......||++
T Consensus 373 ~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~--elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~~ 443 (607)
T 1nbw_A 373 QVIARELSARLQTEVVVGG--VEANMAIAGALTTPGC--AAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGNM 443 (607)
T ss_dssp CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTC--CSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHHH
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC--cCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchHH
Confidence 4577888888 99 5555 9999999999776664 88899999999999999998544443 3336789999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCC----------CeEEEEE--ccccC---Cc------
Q 048693 105 FDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSST----------SQTTIEI--DSLYE---GI------ 163 (539)
Q Consensus 105 id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~----------~~~~~~i--~~~~~---~~------ 163 (539)
++..|+.-|.-. + +..||+.|. .... +...+.+ +.+.. ..
T Consensus 444 VT~DIA~~Lg~~-------d-----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~~ 504 (607)
T 1nbw_A 444 VSLLIKTELGLE-------D-----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKE 504 (607)
T ss_dssp HHHHHHHHHTCS-------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEET
T ss_pred HHHHHHHHhCCC-------C-----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccc
Confidence 999988777321 0 168899999 5321 1223444 22211 01
Q ss_pred eeEEEEeHHH--HHHHHHHHHHHHHHH--HHHHHHhCCC-----CCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcc---
Q 048693 164 DFSSVITRAR--FEELNMDLFRKCIKH--VDMCLRTGKT-----DKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRL--- 231 (539)
Q Consensus 164 ~~~~~itr~e--~e~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v--- 231 (539)
+.-..| +.+ +|+ ++-+-+++.+. ++..|+..+. +..+|..|+|+||+|.++.+.++.++.|+..++
T Consensus 505 ~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiG 582 (607)
T 1nbw_A 505 GELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAG 582 (607)
T ss_dssp TEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEE
T ss_pred cceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEe
Confidence 111244 444 555 44444443333 2333555433 235779999999999999999999999943122
Q ss_pred ----cccCCcchhhhchHHHHHH
Q 048693 232 ----CKNINPDEAVAYGAAVQAA 250 (539)
Q Consensus 232 ----~~~~~p~~avA~GAal~a~ 250 (539)
.....|..|+|.|.+++-+
T Consensus 583 rP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 583 QGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp ECCGGGTSCSCCHHHHHHHHHHH
T ss_pred cCCccccCCchHHHHHHHHHhhh
Confidence 2245899999999998653
No 26
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.28 E-value=2.3e-12 Score=133.76 Aligned_cols=223 Identities=17% Similarity=0.152 Sum_probs=139.5
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhcccccc-CCCceEEEEEeCCceeEEEEEEEecCee
Q 048693 12 SNAVVTVPAYFTNSQRQATKDAG-AMAGLNVLNIISEPTAAAIACGLDRKA-ASEKNVLIFDLGGGTFDVSLLAIEKGIF 89 (539)
Q Consensus 12 ~~vvitVP~~~~~~~r~~l~~aa-~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~vlvvDiGggTtdisv~~~~~~~~ 89 (539)
..+++|.|...+...|+.|.+.+ +.+|++.+.++.+|.+|+++.+..... .....-+|||+|+|+|+++.+. ++..
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G~~ 201 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EGYV 201 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TTEE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CCEE
Confidence 47999999999999999999988 789999999999999999988754211 1134579999999999999985 3321
Q ss_pred eEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCe-----------EEEEEcc
Q 048693 90 KVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQ-----------TTIEIDS 158 (539)
Q Consensus 90 ~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~-----------~~~~i~~ 158 (539)
+.......++||+++|+.|.+++..+... ... .+.+|.+|+.+..... ....+..
T Consensus 202 -l~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~~-------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~ 267 (427)
T 3dwl_A 202 -IGSSIKTMPLAGRDVTYFVQSLLRDRNEP------DSS-------LKTAERIKEECCYVCPDIVKEFSRFDREPDRYLK 267 (427)
T ss_dssp -CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CC
T ss_pred -ehhhheeccccHHHHHHHHHHHHHHcCCC------chh-------HHHHHHHHHhcCcccCCHHHHHHHhhcCccccce
Confidence 11112235899999999999888654321 000 1345555555432110 0000110
Q ss_pred --c--cCCceeEEEEeHHHHH---HHHHHH------HHHHHHHHHHHHHhCCCCC--CCCCeEEEEcCCCChHHHHHHHH
Q 048693 159 --L--YEGIDFSSVITRARFE---ELNMDL------FRKCIKHVDMCLRTGKTDK--SSVDDVVIVGGSARIPKVQQLLQ 223 (539)
Q Consensus 159 --~--~~~~~~~~~itr~e~e---~~~~~~------~~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~i~~~l~ 223 (539)
+ .+|....+++..++|. -+++|- ...|.+.|.+.|.+...+. .-.+.|+|+||+|.+|++.++|+
T Consensus 268 ~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~ 347 (427)
T 3dwl_A 268 YASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQ 347 (427)
T ss_dssp BCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHH
T ss_pred eEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHH
Confidence 1 1233334556666542 223331 2457778888887654321 11257999999999999998888
Q ss_pred HHhC-------------------C--CcccccCCcchhhhchHHHHHH
Q 048693 224 EFFN-------------------G--KRLCKNINPDEAVAYGAAVQAA 250 (539)
Q Consensus 224 ~~f~-------------------~--~~v~~~~~p~~avA~GAal~a~ 250 (539)
+.+. . .+|..+.++..++=+|++++|.
T Consensus 348 ~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 348 RDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 7651 1 1233344667888999999885
No 27
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.01 E-value=5.4e-10 Score=117.22 Aligned_cols=92 Identities=17% Similarity=0.297 Sum_probs=75.2
Q ss_pred cEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeE
Q 048693 13 NAVVTVPAYFTNSQRQATKDAG-AMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKV 91 (539)
Q Consensus 13 ~vvitVP~~~~~~~r~~l~~aa-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v 91 (539)
.++||.|.......|+.|.+++ +.+|++.+.++.+|.||+++.+.. .-||||+|+|+|+++.+. ++.. +
T Consensus 116 pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~-------tglVVDiG~g~T~vvPI~--~G~~-l 185 (498)
T 3qb0_A 116 PALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------NCLVVDIGHDTCSVSPIV--DGMT-L 185 (498)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------SEEEEEECSSCEEEEEEE--TTEE-C
T ss_pred ceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC-------eEEEEEcCCCcEEEEEEe--CCEE-c
Confidence 5999999999999999998875 789999999999999999998752 249999999999999986 3321 1
Q ss_pred EEecCCCCCcHHHHHHHHHHHHH
Q 048693 92 KATAGDTHLGGEDFDNRMVNHFI 114 (539)
Q Consensus 92 ~~~~~~~~lGG~~id~~l~~~l~ 114 (539)
........+||+++|+.|.++|.
T Consensus 186 ~~ai~rl~vgG~~lt~~L~~lL~ 208 (498)
T 3qb0_A 186 SKSTRRNFIAGKFINHLIKKALE 208 (498)
T ss_dssp GGGCEEESCSHHHHHHHHHHHTT
T ss_pred cccceeccccHHHHHHHHHHHHH
Confidence 11122368999999999999885
No 28
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.87 E-value=2.7e-08 Score=108.21 Aligned_cols=101 Identities=17% Similarity=0.294 Sum_probs=79.1
Q ss_pred hhhCCCCCc-----EEEEeCCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeE
Q 048693 5 DYVGSPVSN-----AVVTVPAYFTNSQRQATKDA-GAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFD 78 (539)
Q Consensus 5 ~~~g~~v~~-----vvitVP~~~~~~~r~~l~~a-a~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtd 78 (539)
..|+....+ ++||.|..++...|+.|.+. .+..|++.+.++.++.+|+++++. ..-+|||+|.+.|+
T Consensus 187 ~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~-------~tglVVDiG~~~T~ 259 (593)
T 4fo0_A 187 KYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL-------SSTCIVDVGDQKTS 259 (593)
T ss_dssp HTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC-------SEEEEEEECSSCEE
T ss_pred HhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC-------CceEEEEeCCCcee
Confidence 356666555 99999999999999999766 456799999999999999999874 35699999999999
Q ss_pred EEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHH
Q 048693 79 VSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQ 115 (539)
Q Consensus 79 isv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 115 (539)
++-+. +|.. +.......++||+++++.|.++|..
T Consensus 260 v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 260 VCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp EEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred eeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 98886 3321 1112233579999999999888854
No 29
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.41 E-value=1.8e-06 Score=83.84 Aligned_cols=74 Identities=24% Similarity=0.174 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHc
Q 048693 175 EELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLS 253 (539)
Q Consensus 175 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~ 253 (539)
++++..+++.+...+.++++..+. .+.|+++||.++++.+++.+.+.+ +.++..+.+|+.+.|+|||++|....
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHhh
Confidence 444455555555555555553321 378999999999999999999999 78888888888899999999997654
No 30
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.14 E-value=4.7e-06 Score=88.58 Aligned_cols=95 Identities=17% Similarity=0.325 Sum_probs=76.7
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeee
Q 048693 12 SNAVVTVPAYFTNSQRQATKDAG-AMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFK 90 (539)
Q Consensus 12 ~~vvitVP~~~~~~~r~~l~~aa-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~ 90 (539)
..++||.|..++...|+.|.+++ +..|++.+.++.+|.+|+++++. ...-+|||+|+|+|+++.+. ++..
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~--eG~v- 292 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVD--EGTV- 292 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEE--TTEE-
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEe--CCEE-
Confidence 36999999999999999998887 46899999999999999998864 23459999999999999985 3321
Q ss_pred EEEecCCCCCcHHHHHHHHHHHHHH
Q 048693 91 VKATAGDTHLGGEDFDNRMVNHFIQ 115 (539)
Q Consensus 91 v~~~~~~~~lGG~~id~~l~~~l~~ 115 (539)
+........+||+++|+.|.++|..
T Consensus 293 l~~ai~rL~iGG~dLT~yL~kLL~~ 317 (655)
T 4am6_A 293 LEHSAITLDYGGDDITRLFALFLLQ 317 (655)
T ss_dssp CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EhhheeeecchHHHHHHHHHHHHHH
Confidence 1111223689999999999998854
No 31
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.97 E-value=8e-05 Score=72.31 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=41.8
Q ss_pred CCeEEEEcC-CCChHHHHHHHHHHh--CCCcccccCCcchhhhchHHHHH
Q 048693 203 VDDVVIVGG-SARIPKVQQLLQEFF--NGKRLCKNINPDEAVAYGAAVQA 249 (539)
Q Consensus 203 i~~ViLvGG-~s~~p~i~~~l~~~f--~~~~v~~~~~p~~avA~GAal~a 249 (539)
++.|+++|| .+.+|.+++.+.+.+ .+.++..+.+|+...|+|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 557999999 899999999999985 46788999999999999999864
No 32
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.93 E-value=4.5e-06 Score=91.94 Aligned_cols=100 Identities=22% Similarity=0.473 Sum_probs=32.2
Q ss_pred ccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccCCCCCC-------CCCCCCCCceeEeccCCCCCCC
Q 048693 300 AHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFIYRKPT-------AKHEFFGNFTFKFLPSLGACST 369 (539)
Q Consensus 300 ~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~p~~~~-------~~h~~~~~h~l~l~~~~~~~~~ 369 (539)
.|.++......+..|+.|+..++|. .|+|..|+|..|..|...-.... ........|.+....-..
T Consensus 37 ~H~f~~~~~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~---- 112 (674)
T 3pfq_A 37 NHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSS---- 112 (674)
T ss_dssp -----------------------------------------------------------------CCCCCEECCSS----
T ss_pred CceEEeeeCCCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCC----
Confidence 4667666667888999999999884 49999999999999975422111 000011225555433322
Q ss_pred CcCcCCcccccccCCCCCCc---eeecCCCCcccCccccC-CCC
Q 048693 370 KDCIDCNKHCHACGRPADGF---VYHCEEKGRNLHPCCFN-LPR 409 (539)
Q Consensus 370 ~~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~-lp~ 409 (539)
..+|+.|++...|. .|+|..|++.+|..|.. +|.
T Consensus 113 ------~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~ 150 (674)
T 3pfq_A 113 ------PTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPS 150 (674)
T ss_dssp ------CCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSCC
T ss_pred ------CCCCCccccccchhhcCccccccCCcchhhhhhhccCc
Confidence 26899999876654 69999999999999985 443
No 33
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.78 E-value=0.00024 Score=70.85 Aligned_cols=71 Identities=17% Similarity=0.056 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HhCCCCCCCCCeEEEEcC-CCChHHHHHHHHHHh-----CCCcccccCCcchhhhc
Q 048693 174 FEELNMDLFRKCIKHVDMCL----RTGKTDKSSVDDVVIVGG-SARIPKVQQLLQEFF-----NGKRLCKNINPDEAVAY 243 (539)
Q Consensus 174 ~e~~~~~~~~~i~~~i~~~l----~~~~~~~~~i~~ViLvGG-~s~~p~i~~~l~~~f-----~~~~v~~~~~p~~avA~ 243 (539)
-++++..++..|.+.|..+. +..+ ++.|+++|| .+..|.+++.|++.+ ++.++..+.+|+.+-|+
T Consensus 278 ~eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAl 352 (360)
T 2i7n_A 278 KEDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAV 352 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHH
Confidence 34455555555555544442 2223 457999999 999999999999986 24678888999999999
Q ss_pred hHHHHH
Q 048693 244 GAAVQA 249 (539)
Q Consensus 244 GAal~a 249 (539)
||++.+
T Consensus 353 GAaL~~ 358 (360)
T 2i7n_A 353 GALLEL 358 (360)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999975
No 34
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.38 E-value=0.00015 Score=55.97 Aligned_cols=52 Identities=17% Similarity=0.418 Sum_probs=38.9
Q ss_pred CcCCCCccC-CCCCCceecCCC-C---cccccccccCCCCCCCCCCCCCCceeEeccCCC
Q 048693 311 LSECNGCKR-PAFGLMYRCELC-N---FNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLG 365 (539)
Q Consensus 311 ~~~C~~C~~-~~~g~~Y~C~~C-~---f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~ 365 (539)
.+.||+|.. ++.|.||+|..| | |+|...|...... .-.|. ..|+|+.+..+.
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~-~~~H~--~~H~~~~i~~~~ 77 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHE-TDIHK--EDHQLEPIYRSS 77 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCC-CSSCC--SSSCEEEECSCC
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCccc-cCCCC--CCCCEEEeeCCC
Confidence 567999996 799999999999 7 9999999865221 12332 358888877654
No 35
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.32 E-value=0.0001 Score=58.88 Aligned_cols=46 Identities=35% Similarity=0.694 Sum_probs=37.1
Q ss_pred CcCCCCccC-CCCCCceecCCC-CcccccccccCCCCCCCCCCCCCCceeEeccCC
Q 048693 311 LSECNGCKR-PAFGLMYRCELC-NFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSL 364 (539)
Q Consensus 311 ~~~C~~C~~-~~~g~~Y~C~~C-~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~ 364 (539)
...|++|.. ++.|.+|+|..| ||+|+..|.... .| ..|+|....++
T Consensus 31 gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~-----~H---~~H~f~~i~~~ 78 (98)
T 2dip_A 31 GIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSY-----CH---LSHTFTFREKR 78 (98)
T ss_dssp CCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTT-----SG---GGSCEEECCSS
T ss_pred CCCCcCCCCCCcccCeEECCCCCCccHHHHHHccC-----CC---CCCCeeEecCC
Confidence 378999996 799999999999 999999997541 24 35888876654
No 36
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=97.12 E-value=0.00043 Score=51.11 Aligned_cols=43 Identities=28% Similarity=0.633 Sum_probs=37.6
Q ss_pred ccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 300 AHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
.|.++......+..|+.|...++|. .|+|+.|+|..|..|+..
T Consensus 12 ~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 12 PHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCccEeEcCCCCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 4777777778899999999999884 399999999999999865
No 37
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.11 E-value=0.00031 Score=51.35 Aligned_cols=47 Identities=28% Similarity=0.675 Sum_probs=35.0
Q ss_pred cCCCCccC-CCCCCceecCCC-CcccccccccCCCCCCCCCCCCCCceeEec
Q 048693 312 SECNGCKR-PAFGLMYRCELC-NFNLHIPCMFIYRKPTAKHEFFGNFTFKFL 361 (539)
Q Consensus 312 ~~C~~C~~-~~~g~~Y~C~~C-~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~ 361 (539)
..|++|.. ++.|.+|+|..| ||+|...|..... ....|. ..|++...
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~-~~~~H~--~~H~~~~~ 60 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGH-AGGSHS--NQHQMKEY 60 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCC-CCSSSC--TTCCEEEE
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCC-cCCCCC--CCCCEEEE
Confidence 57999996 599999999999 9999999976522 122343 34777654
No 38
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=97.03 E-value=0.00035 Score=48.60 Aligned_cols=42 Identities=29% Similarity=0.588 Sum_probs=35.0
Q ss_pred cccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 301 HYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 301 H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
|.++......+..|+.|+..++|. .|+|+.|++..|..|+..
T Consensus 1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCEeecCCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 445555667888999999999884 499999999999999864
No 39
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.03 E-value=0.00026 Score=54.74 Aligned_cols=47 Identities=19% Similarity=0.434 Sum_probs=40.9
Q ss_pred CCcccccccccccCCCCcCCCCccCCCCCC-----ceecCCCCccccccccc
Q 048693 295 HTSHQAHYLQLKNHKTLSECNGCKRPAFGL-----MYRCELCNFNLHIPCMF 341 (539)
Q Consensus 295 h~sHp~H~L~l~~~~~~~~C~~C~~~~~g~-----~Y~C~~C~f~lH~~Ca~ 341 (539)
...+..|.+....+..+..|+.|+..++|. .|.|..|+|..|..|..
T Consensus 19 ~~~~~~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 19 YICHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp CEEETTEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred eEEcCCcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 345667888888888999999999999884 69999999999999986
No 40
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=97.03 E-value=8.2e-05 Score=52.07 Aligned_cols=43 Identities=23% Similarity=0.556 Sum_probs=33.7
Q ss_pred CcCCCCccCCCCCCceecCCC-CcccccccccCCCCCCCCCCCCCCceeEeccC
Q 048693 311 LSECNGCKRPAFGLMYRCELC-NFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPS 363 (539)
Q Consensus 311 ~~~C~~C~~~~~g~~Y~C~~C-~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~ 363 (539)
.+.|++|...+ |.+|+|..| ||+|...|... . . |.|++.-.+.
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~--~---~----H~H~m~~~~~ 49 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNT--K---S----HTHKMVKWGL 49 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHH--H---C----CCSSEEEECS
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhC--C---C----CCCceEEecC
Confidence 46799999985 889999999 99999999864 1 1 3577776543
No 41
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=96.99 E-value=0.00029 Score=52.03 Aligned_cols=45 Identities=27% Similarity=0.535 Sum_probs=38.7
Q ss_pred ccccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 298 HQAHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 298 Hp~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
...|.++......+..|+.|...++|. .|+|+.|+|..|..|+..
T Consensus 7 ~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 7 VGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp EEECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred eCCceEEeEeCCCCCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 346888887878899999999999874 499999999999999865
No 42
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.93 E-value=0.0017 Score=69.58 Aligned_cols=86 Identities=16% Similarity=0.167 Sum_probs=62.4
Q ss_pred EEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHH
Q 048693 168 VITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAV 247 (539)
Q Consensus 168 ~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal 247 (539)
.-++.++..++.-+++.+.-.++..++.......+++.|.++||+++++.+.+++.+.+ +.+|..+ +..++.|+|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHH
Confidence 34788774434455555544444444322212345889999999999999999999999 7888776 456789999999
Q ss_pred HHHHHcCC
Q 048693 248 QAAVLSGN 255 (539)
Q Consensus 248 ~a~~~~~~ 255 (539)
.|+.-.|.
T Consensus 486 lA~~a~G~ 493 (554)
T 3l0q_A 486 MGTVAAGV 493 (554)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 99988774
No 43
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.92 E-value=0.00078 Score=52.38 Aligned_cols=44 Identities=27% Similarity=0.546 Sum_probs=38.4
Q ss_pred cccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 299 QAHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 299 p~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
..|.+.......+..|+.|...++|. .|+|..|+|..|..|...
T Consensus 16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 35778887888899999999999884 499999999999999865
No 44
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=96.92 E-value=0.00049 Score=52.68 Aligned_cols=45 Identities=24% Similarity=0.520 Sum_probs=38.8
Q ss_pred ccccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 298 HQAHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 298 Hp~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
+..|.+.......+..|+.|...++|. -|+|+.|+|..|..|...
T Consensus 21 ~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 21 VKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SSSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCCCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 346888888888899999999999874 399999999999999865
No 45
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=96.85 E-value=0.00058 Score=50.57 Aligned_cols=43 Identities=23% Similarity=0.550 Sum_probs=37.6
Q ss_pred ccccccccCCCCcCCCCccCCCCCCc---eecCCCCcccccccccC
Q 048693 300 AHYLQLKNHKTLSECNGCKRPAFGLM---YRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l~~~~~~~~C~~C~~~~~g~~---Y~C~~C~f~lH~~Ca~~ 342 (539)
.|.+.......+..|+.|...++|.. |+|+.|+|..|..|+..
T Consensus 13 ~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 13 QHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CcccEeeeCCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 57787777788999999999999843 99999999999999865
No 46
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.83 E-value=0.00098 Score=52.04 Aligned_cols=43 Identities=23% Similarity=0.674 Sum_probs=37.8
Q ss_pred ccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 300 AHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
.|.+.......+..|+.|...++|. .|+|+.|+|..|..|+..
T Consensus 17 ~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 17 KHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CcccEeeeCCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 5778877778899999999999984 499999999999999865
No 47
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=96.83 E-value=0.00045 Score=75.92 Aligned_cols=87 Identities=14% Similarity=0.179 Sum_probs=29.5
Q ss_pred ccccccCCCCCCc---eeecCCCCcccCccccCC-CCcc-------c----CCCeeEEEecccccccccccccccccccc
Q 048693 377 KHCHACGRPADGF---VYHCEEKGRNLHPCCFNL-PRKL-------P----IDSVEFELSDKQLSKKCIWRNSKRLQETV 441 (539)
Q Consensus 377 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l-p~~i-------~----~~~h~~~l~~~~~~~~c~~c~~~c~~~~~ 441 (539)
.+|+.|+.-+-|+ .|+|..|++.+|..|... |..- . ...|.+....-..+..|..|...+..
T Consensus 49 ~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~g--- 125 (674)
T 3pfq_A 49 TFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYG--- 125 (674)
T ss_dssp -----------------------------------------------------CCCCCEECCSSCCCCSSSCSCCBB---
T ss_pred CccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccch---
Confidence 6899999977664 599999999999999864 2211 0 11243333222344466666544321
Q ss_pred cCCCCeEEeecCCCeeecccchhhhhH
Q 048693 442 CDRWGWSYVSKCKNYHCHAFCSTEMLL 468 (539)
Q Consensus 442 ~~~~~~~y~~~~~~~~~H~~C~~~~~~ 468 (539)
-..--|+|..|.+.+|.+|......
T Consensus 126 --~~~qg~~C~~C~~~~H~~C~~~v~~ 150 (674)
T 3pfq_A 126 --LIHQGMKCDTCMMNVHKRCVMNVPS 150 (674)
T ss_dssp --SSSCEECCSSSCCCBCSSTTSSSCC
T ss_pred --hhcCccccccCCcchhhhhhhccCc
Confidence 1124789999999999999977654
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.69 E-value=0.003 Score=66.71 Aligned_cols=52 Identities=17% Similarity=0.138 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
+++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 393 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 444 (504)
T 3ll3_A 393 KPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALGL 444 (504)
T ss_dssp CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcCc
Confidence 5889999999999999999999999 7888776 46779999999999988773
No 49
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.69 E-value=0.0027 Score=66.74 Aligned_cols=82 Identities=18% Similarity=0.174 Sum_probs=56.8
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHH
Q 048693 170 TRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQA 249 (539)
Q Consensus 170 tr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a 249 (539)
++.++. .-+++.+.-.++..++........++.|.++||+++++.+.+++.+.+ +.+|..+..++.+.|+|||+.|
T Consensus 357 ~~~~~~---rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 357 GPNELA---RAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHH
Confidence 455543 334444443333333322112235788999999999999999999999 7888887655556899999999
Q ss_pred HHHcCC
Q 048693 250 AVLSGN 255 (539)
Q Consensus 250 ~~~~~~ 255 (539)
+.-.|.
T Consensus 433 ~~~~g~ 438 (484)
T 2itm_A 433 QIAANP 438 (484)
T ss_dssp HHHHCT
T ss_pred HHHcCC
Confidence 887763
No 50
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.67 E-value=0.0034 Score=66.28 Aligned_cols=80 Identities=13% Similarity=0.143 Sum_probs=58.6
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHH
Q 048693 170 TRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQA 249 (539)
Q Consensus 170 tr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a 249 (539)
++.++. .-+++.+.-.++..++...... .++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHH
Confidence 454443 4445555555555555433223 6789999999999999999999999 7888776 44568999999999
Q ss_pred HHHcCC
Q 048693 250 AVLSGN 255 (539)
Q Consensus 250 ~~~~~~ 255 (539)
+.-.|.
T Consensus 439 ~~~~g~ 444 (497)
T 2zf5_O 439 GLAVDY 444 (497)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 888763
No 51
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.67 E-value=0.00043 Score=52.55 Aligned_cols=44 Identities=25% Similarity=0.397 Sum_probs=38.4
Q ss_pred cccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 299 QAHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 299 p~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
..|.++......+..|+.|...++|. -|+|+.|+|..|..|+..
T Consensus 16 ~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 16 KPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp SBCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CCCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 35788888888899999999999984 499999999999999864
No 52
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.66 E-value=0.0035 Score=66.83 Aligned_cols=79 Identities=13% Similarity=0.092 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcC
Q 048693 175 EELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 254 (539)
Q Consensus 175 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~ 254 (539)
.+++.-+++.+.-.++..++........++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 3444455666655556666655444456789999999999999999999999 7888776 5678999999999987765
Q ss_pred C
Q 048693 255 N 255 (539)
Q Consensus 255 ~ 255 (539)
.
T Consensus 485 ~ 485 (538)
T 4bc3_A 485 G 485 (538)
T ss_dssp T
T ss_pred c
Confidence 3
No 53
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=96.60 E-value=0.0013 Score=46.07 Aligned_cols=42 Identities=24% Similarity=0.576 Sum_probs=36.5
Q ss_pred ccccccccCCCCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 300 AHYLQLKNHKTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.|.++......+..|+.|+..++ ..|+|+.|++..|..|...
T Consensus 3 ~H~F~~~~~~~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 3 THNFARKTFLKLAFCDICQKFLL-NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CCCCEEECCSSCEECTTSSSEEC-SEEECTTTTCCBCSTTSSS
T ss_pred CceeEeEeCCCCcCCCCcccccc-cCCEeCCCCCeEChhHHhh
Confidence 46677777778899999999998 6799999999999999865
No 54
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=96.57 E-value=0.0018 Score=48.67 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=36.7
Q ss_pred cccccc-ccCCCCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 300 AHYLQL-KNHKTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l-~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.|.+.. .....+..|+.|+..+....|+|+.|+|..|..|...
T Consensus 23 ~H~F~~~~~~~~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 23 GHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SCCCEECCCCSSCCBCTTTSSBCSSCCEECTTSSCEECTGGGGG
T ss_pred CCccceeecCCCCcchhhhhHHHHhCcCccCCCCCeechhhhcc
Confidence 466666 6778889999999999656699999999999999865
No 55
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.56 E-value=0.004 Score=65.93 Aligned_cols=79 Identities=22% Similarity=0.214 Sum_probs=58.4
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcc-cccCCcchhhhchHHHH
Q 048693 170 TRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRL-CKNINPDEAVAYGAAVQ 248 (539)
Q Consensus 170 tr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v-~~~~~p~~avA~GAal~ 248 (539)
++.++. .-+++.+.-.++..++.... .. ++.|.++||+++++.+.+++.+.+ +.+| ..+ .+.++.|+|||+.
T Consensus 375 ~~~~l~---RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGaA~l 447 (511)
T 3hz6_A 375 TRAQIL---LAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGLAAL 447 (511)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHHHHH
Confidence 555554 34444554444444443322 34 789999999999999999999999 7888 665 6889999999999
Q ss_pred HHHHcCC
Q 048693 249 AAVLSGN 255 (539)
Q Consensus 249 a~~~~~~ 255 (539)
|+.-.|.
T Consensus 448 A~~a~G~ 454 (511)
T 3hz6_A 448 AAVELEW 454 (511)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9988774
No 56
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.55 E-value=0.0026 Score=67.31 Aligned_cols=52 Identities=31% Similarity=0.488 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
+++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 424 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~ 475 (515)
T 3i8b_A 424 SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQAAWVLSG 475 (515)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999 7888776 55678899999999887764
No 57
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=96.47 E-value=0.0022 Score=44.10 Aligned_cols=40 Identities=23% Similarity=0.461 Sum_probs=32.0
Q ss_pred cccccccCCCCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 301 HYLQLKNHKTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 301 H~L~l~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
|-+...... ...|+.|+..++. .|+|+.|+|..|..|+..
T Consensus 5 HrF~~~t~~-~t~C~~C~k~i~~-G~kC~~Ck~~cH~kC~~~ 44 (49)
T 1kbe_A 5 HRFSTKSWL-SQVCNVCQKSMIF-GVKCKHCRLKCHNKCTKE 44 (49)
T ss_dssp CCEEEECCS-SCCCSSSCCSSCC-EEEETTTTEEESSSCTTT
T ss_pred cccCccCCC-CcCccccCceeEC-cCCCCCCCCccchhhcCc
Confidence 555555444 4789999999974 399999999999999975
No 58
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.46 E-value=0.0039 Score=65.83 Aligned_cols=52 Identities=21% Similarity=0.302 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
.++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G~ 455 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVGF 455 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhCc
Confidence 4789999999999999999999999 7888766 56788999999999988773
No 59
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.35 E-value=0.0071 Score=64.23 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
.++.|.++||+++++.+.+++.+.+ +.+|..+ ...|+.|+|||+.|+.-.|.
T Consensus 402 ~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a~G~ 453 (526)
T 3ezw_A 402 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 453 (526)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999 7888776 45678999999999988874
No 60
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.35 E-value=0.004 Score=66.90 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=56.9
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCC-ChHHHHHHHHHHhCCCcccccCCcchhhhchHHHH
Q 048693 170 TRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSA-RIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQ 248 (539)
Q Consensus 170 tr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~ 248 (539)
++.+|.. -+++.+.-.++..++........++.|.++||++ +++.+.+++.+.+ +.+|..+ .+.++.|+|||+.
T Consensus 410 t~~~l~R---AvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYR---ALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 5655543 3444443333333332111234578999999999 9999999999999 7888766 5678999999999
Q ss_pred HHHHcC
Q 048693 249 AAVLSG 254 (539)
Q Consensus 249 a~~~~~ 254 (539)
|+.-.|
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998877
No 61
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.33 E-value=0.0033 Score=66.66 Aligned_cols=52 Identities=19% Similarity=0.117 Sum_probs=44.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
+++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999 7888766 56778999999999988874
No 62
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.31 E-value=0.0043 Score=65.68 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
+++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhCc
Confidence 4789999999999999999999999 7888766 46778999999999988774
No 63
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.30 E-value=0.0047 Score=65.30 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
.++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 454 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVGF 454 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhCc
Confidence 4789999999999999999999999 7888765 56789999999999988774
No 64
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.26 E-value=0.0085 Score=63.12 Aligned_cols=53 Identities=23% Similarity=0.273 Sum_probs=45.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 201 SSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 201 ~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
..++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 397 ~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G~ 449 (495)
T 2dpn_A 397 VRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAGA 449 (495)
T ss_dssp CCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHTS
T ss_pred CCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcCc
Confidence 34688999999999999999999999 7888766 45668999999999887763
No 65
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.22 E-value=0.0047 Score=65.30 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
.++.|.++||+++++.+.+++.+.+ +.+|..... .++.|+|||+.|+.-.|.
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~G~ 451 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGGGD 451 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHhCC
Confidence 4789999999999999999999999 788877744 568899999999988873
No 66
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=96.17 E-value=0.0023 Score=46.07 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=36.7
Q ss_pred cccccc-ccCCCCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 300 AHYLQL-KNHKTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l-~~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.|.+.. .....+..|+.|+..+....|+|+.|+|..|..|...
T Consensus 10 ~H~F~~~~~~~~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 10 GHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SCCCEECCCSSCCEECTTTCSEECSCCEECTTTSCEECHHHHTT
T ss_pred CCcCeeeeccCCCeEchhcchhhhhCccEeCCCCCeEehhhhhh
Confidence 466766 6778899999999998656699999999999999865
No 67
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.09 E-value=0.0067 Score=64.07 Aligned_cols=52 Identities=21% Similarity=0.307 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
.++.|.++||+++++.+.+++.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G~ 454 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVGF 454 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcCc
Confidence 4689999999999999999999999 7888766 55678999999999888773
No 68
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=95.96 E-value=0.0083 Score=41.16 Aligned_cols=30 Identities=20% Similarity=0.452 Sum_probs=26.4
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|++.+- +.|+|.+|+|..|+.|+..
T Consensus 15 t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~ 44 (49)
T 1kbe_A 15 QVCNVCQKSMI-FGVKCKHCRLKCHNKCTKE 44 (49)
T ss_dssp CCCSSSCCSSC-CEEEETTTTEEESSSCTTT
T ss_pred cCccccCceeE-CcCCCCCCCCccchhhcCc
Confidence 57999999875 4699999999999999974
No 69
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=95.95 E-value=0.24 Score=49.07 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhC--CCcccccCC---cchhhhchHHHHHHHHcCC
Q 048693 182 FRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCKNIN---PDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 182 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~--~~~v~~~~~---p~~avA~GAal~a~~~~~~ 255 (539)
.+.+.+.+++++++.+ ++.|+|+||-+.+.++++.+.+.+. +.++..+.. .|.++++|++.+.....|.
T Consensus 234 ~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g~ 307 (334)
T 3eno_A 234 FAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGV 307 (334)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 3444455555555443 5799999999999999999998873 445555443 4788999999877766663
No 70
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.93 E-value=0.008 Score=63.45 Aligned_cols=52 Identities=17% Similarity=0.177 Sum_probs=45.0
Q ss_pred CC-CeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcCC
Q 048693 202 SV-DDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 255 (539)
Q Consensus 202 ~i-~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~~ 255 (539)
++ +.|.++||+++++.+.+++.+.+ +.+|... .+.++.|+|||+.|+.-.|.
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTC
T ss_pred CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhCc
Confidence 35 78999999999999999999999 7888766 45668999999999888763
No 71
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=95.87 E-value=0.0088 Score=43.95 Aligned_cols=31 Identities=29% Similarity=0.625 Sum_probs=27.2
Q ss_pred ccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|++...|+ .|+|..|++.+|..|...
T Consensus 24 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 24 TFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred cCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 7899999987764 599999999999999863
No 72
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.76 E-value=0.23 Score=48.70 Aligned_cols=78 Identities=18% Similarity=0.251 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHhcccccc-CCCceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcHHHH
Q 048693 27 RQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKA-ASEKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGEDF 105 (539)
Q Consensus 27 r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~i 105 (539)
...+.++-+..|++.-.+-.|-+|...+.+..... ......+|+|+|||+|.+++.+ ++.. . ...+.++|.-.+
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~--~-~~~Sl~lG~vrl 166 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEI--L-WKQSFEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCE--E-EEEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeE--e-eeEEEechhhHH
Confidence 34445555667998755555666654443332222 1245789999999999999986 3221 1 133467888877
Q ss_pred HHHH
Q 048693 106 DNRM 109 (539)
Q Consensus 106 d~~l 109 (539)
.+.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7653
No 73
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.65 E-value=0.97 Score=44.51 Aligned_cols=210 Identities=15% Similarity=0.174 Sum_probs=105.8
Q ss_pred CCCcEEEE-eCCCCCHHHHHHH---HHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEe
Q 048693 10 PVSNAVVT-VPAYFTNSQRQAT---KDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIE 85 (539)
Q Consensus 10 ~v~~vvit-VP~~~~~~~r~~l---~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~ 85 (539)
+++.+++| =|..|+.- |..+ +..+...++ ++.-+++-+|-|.+..+ ... ...+++++-| |.|.+. .+.
T Consensus 68 did~Ia~~~GPG~~~~l-rvg~~~ak~la~~~~~-pl~~v~h~~aHa~~a~~-~~~--~~~~~l~v~G-G~t~~i--~~~ 139 (330)
T 2ivn_A 68 DIDVIAFSQGPGLGPAL-RVVATAARALAVKYRK-PIVGVNHCIAHVEITKM-FGV--KDPVGLYVSG-GNTQVL--ALE 139 (330)
T ss_dssp TCCEEEEEEESSCHHHH-HHHHHHHHHHHHHTTC-CEEEEEHHHHHHHGGGG-GTC--CSCEEEEECS-SCEEEE--EEE
T ss_pred HCcEEEEECCCCchHHH-HHHHHHHHHHHHHcCC-CEEeeCcHHHHHHHHhh-cCC--CCCeEEEEcC-CCceEE--EEc
Confidence 56777764 57666432 2222 222333344 45677888887766544 322 2224444445 455443 345
Q ss_pred cCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccccCCcee
Q 048693 86 KGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSLYEGIDF 165 (539)
Q Consensus 86 ~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~ 165 (539)
.+.++.++...+. --|+.||. ++..+ +.... ...+|+..+...+..+. -.+.+. +.++
T Consensus 140 ~~~~~~lg~t~dd-s~Gr~fD~-vA~~L--------Gl~~~----~~~~le~lA~~g~~~~~----~p~~i~----~~~f 197 (330)
T 2ivn_A 140 GGRYRVFGETLDI-GIGNAIDV-FAREL--------GLGFP----GGPKVEKLAEKGEKYIE----LPYAVK----GMDL 197 (330)
T ss_dssp TTEEEEEEEBSSS-CHHHHHHH-HHHHH--------TCCSC----HHHHHHHHHHTCCSCCC----CCCCEE----TTEE
T ss_pred CCeEEEEEeecCc-hhHHHHHH-HHHHh--------CCCCC----cHHHHHHHhhcCCCcCC----CCcccC----CCeE
Confidence 7788888754433 34666664 23333 22221 23344444432211000 000111 1112
Q ss_pred EEE--------------EeHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhC--C
Q 048693 166 SSV--------------ITRARFEELNMD-LFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFN--G 228 (539)
Q Consensus 166 ~~~--------------itr~e~e~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~--~ 228 (539)
++. .+++++...+.. +.+.+.+.+++..+.. .++.|+|+||-+.+..+++.|.+.+. +
T Consensus 198 sfs~l~~~v~~~~~~g~~~~~diAa~fq~~l~~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g 272 (330)
T 2ivn_A 198 SFSGLLTEAIRKYRSGKYRVEDLAYSFQETAFAALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRG 272 (330)
T ss_dssp CCHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHT
T ss_pred ehHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcC
Confidence 110 122222222222 2333344444444432 35799999999999999999998772 3
Q ss_pred CcccccC---CcchhhhchHHHHHHHHcC
Q 048693 229 KRLCKNI---NPDEAVAYGAAVQAAVLSG 254 (539)
Q Consensus 229 ~~v~~~~---~p~~avA~GAal~a~~~~~ 254 (539)
.++..+. -.|.++++|++.+.....|
T Consensus 273 ~~v~~p~~~~~~D~G~~iG~a~~~~~~~~ 301 (330)
T 2ivn_A 273 IKFFVPPYDLCRDNGAMIAYTGLRMYKAG 301 (330)
T ss_dssp CEEECCCHHHHSSCHHHHHHHHHHHHHTT
T ss_pred CEEEecCCCCCChhHHHHHHHHHHHHhcC
Confidence 4555554 2367889998887655544
No 74
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.60 E-value=0.018 Score=44.82 Aligned_cols=44 Identities=23% Similarity=0.428 Sum_probs=33.7
Q ss_pred CCceeEeccCCCCCCCCcCcCCcccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 354 GNFTFKFLPSLGACSTKDCIDCNKHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 354 ~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
..|.|....-.. ..+|+.|++...|+ .|+|..|++.+|..|...
T Consensus 16 ~~H~F~~~~~~~----------pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 16 SKHKFKIHTYGS----------PTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp TSCCCEEECCSS----------CCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCcccEeeeCCC----------CcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 347776654332 27899999987763 599999999999999864
No 75
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.53 E-value=0.008 Score=45.43 Aligned_cols=44 Identities=23% Similarity=0.255 Sum_probs=34.3
Q ss_pred CCCceeEeccCCCCCCCCcCcCCcccccccCCCCCCc---eeecCCCCcccCccccC
Q 048693 353 FGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPADGF---VYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 353 ~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~ 406 (539)
...|.|....-..+ .+|+.|++...|+ .|+|..|++.+|..|..
T Consensus 15 ~~~H~F~~~~f~~p----------t~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~ 61 (74)
T 2db6_A 15 DKPHKFKDHFFKKP----------KFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQS 61 (74)
T ss_dssp SSBCCEEEEECSSC----------EECSSSCCEECHHHHEEEEESSSCCEECTTTTG
T ss_pred CCCCceEEeeCCCC----------cCchhcChhhccccCCccccCCCCCccChhHHh
Confidence 34577776543322 7899999988774 59999999999999985
No 76
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.52 E-value=0.015 Score=57.27 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcHHHHH
Q 048693 27 RQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGEDFD 106 (539)
Q Consensus 27 r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~id 106 (539)
...+.++-+..|++.-.+-.|.+|...+.+...........+|+|+|||+|.+++.+ ++.+ . ...+.++|+-.+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~--~-~~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKV--R-EVISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEE--E-EEEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCce--e-eEEEEeccHHHHH
Confidence 344555555789987666667777655544322221245699999999999999986 3332 1 2334789999888
Q ss_pred HHH
Q 048693 107 NRM 109 (539)
Q Consensus 107 ~~l 109 (539)
+.+
T Consensus 175 e~~ 177 (315)
T 1t6c_A 175 ETF 177 (315)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 77
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.51 E-value=0.006 Score=44.43 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=32.9
Q ss_pred ccccccCCC-CCCceeecCCC-CcccCccccCCCCc-ccC-CCeeEEE
Q 048693 377 KHCHACGRP-ADGFVYHCEEK-GRNLHPCCFNLPRK-LPI-DSVEFEL 420 (539)
Q Consensus 377 ~~C~~C~~~-~~g~~Y~C~~C-~f~lH~~C~~lp~~-i~~-~~h~~~l 420 (539)
..||.|++. +.|+.|+|..| +|||...|...... -.| ..|+...
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~~~~~H~~~H~~~~ 59 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKE 59 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCCCCSSSCTTCCEEE
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCCcCCCCCCCCCEEE
Confidence 679999974 99999999999 59999999755432 223 2555543
No 78
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.43 E-value=0.011 Score=45.88 Aligned_cols=31 Identities=23% Similarity=0.588 Sum_probs=27.4
Q ss_pred ccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|++...|+ .|.|..|+|.+|..|...
T Consensus 29 t~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 29 TFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred cChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 7899999988764 599999999999999864
No 79
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=95.37 E-value=0.0048 Score=49.22 Aligned_cols=41 Identities=29% Similarity=0.559 Sum_probs=33.2
Q ss_pred ccccccCC-CCCCceeecCCC-CcccCccccCCCCcccCCCeeEEE
Q 048693 377 KHCHACGR-PADGFVYHCEEK-GRNLHPCCFNLPRKLPIDSVEFEL 420 (539)
Q Consensus 377 ~~C~~C~~-~~~g~~Y~C~~C-~f~lH~~C~~lp~~i~~~~h~~~l 420 (539)
..||.|+. ++.|+.|+|..| +|||...|..... |..|++..
T Consensus 32 v~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~---H~~H~f~~ 74 (98)
T 2dip_A 32 IPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC---HLSHTFTF 74 (98)
T ss_dssp CCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS---GGGSCEEE
T ss_pred CCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC---CCCCCeeE
Confidence 78999997 799999999999 5999999976553 45566544
No 80
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=95.37 E-value=0.013 Score=45.06 Aligned_cols=48 Identities=19% Similarity=0.442 Sum_probs=36.0
Q ss_pred cccccccCC-CCCCceeecCCCC----cccCccccCCCCc-ccC-CCeeEEEecc
Q 048693 376 NKHCHACGR-PADGFVYHCEEKG----RNLHPCCFNLPRK-LPI-DSVEFELSDK 423 (539)
Q Consensus 376 ~~~C~~C~~-~~~g~~Y~C~~C~----f~lH~~C~~lp~~-i~~-~~h~~~l~~~ 423 (539)
...||.|++ ++.|..|+|..|. |||...|...... -.| ..|++.....
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~~~H~~~H~~~~i~~ 75 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYR 75 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCCSSCCSSSCEEEECS
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCccccCCCCCCCCEEEeeC
Confidence 378999996 7899999999994 9999999876432 234 4677655443
No 81
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.26 E-value=0.021 Score=60.03 Aligned_cols=50 Identities=22% Similarity=0.230 Sum_probs=41.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHHcC
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 254 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~~~ 254 (539)
.++.|.++||+++++.+.+++.+.+ +.+|.... .++.|+||++.|..-.+
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~a~~ 442 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLMTLD 442 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHHHcC
Confidence 4689999999999999999999999 78887553 68899999777665543
No 82
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=95.23 E-value=0.01 Score=41.04 Aligned_cols=31 Identities=32% Similarity=0.655 Sum_probs=27.0
Q ss_pred ccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|++...|+ .|+|..|++..|..|...
T Consensus 12 t~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 12 TFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 7899999987764 599999999999999753
No 83
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=95.14 E-value=0.012 Score=44.92 Aligned_cols=44 Identities=18% Similarity=0.344 Sum_probs=33.7
Q ss_pred CCceeEeccCCCCCCCCcCcCCcccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 354 GNFTFKFLPSLGACSTKDCIDCNKHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 354 ~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
..|.|....-.. +.+|+.|++.+.|+ .|.|..|+|.+|..|...
T Consensus 22 ~~H~F~~~~f~~----------pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 22 KCHEFTATFFPQ----------PTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SSCEEEEECCSS----------CEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCCccEEEcCCC----------CcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 457777654322 37899999977664 599999999999999753
No 84
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=95.06 E-value=0.01 Score=43.53 Aligned_cols=31 Identities=32% Similarity=0.655 Sum_probs=26.9
Q ss_pred ccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|++...|+ .|.|..|+|..|..|+..
T Consensus 21 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 21 TFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp CBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 7899999987664 599999999999999853
No 85
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=94.91 E-value=0.018 Score=40.11 Aligned_cols=30 Identities=20% Similarity=0.482 Sum_probs=26.5
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|++... ..|+|..|++..|..|...
T Consensus 15 t~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 15 AFCDICQKFLL-NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp EECTTSSSEEC-SEEECTTTTCCBCSTTSSS
T ss_pred cCCCCcccccc-cCCEeCCCCCeEChhHHhh
Confidence 78999998765 6899999999999999863
No 86
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=94.86 E-value=0.022 Score=42.73 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=27.1
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|+.-+....|+|..|+|..|..|..+
T Consensus 36 t~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 36 GWCDLCGREVLRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp CBCTTTSSBCSSCCEECTTSSCEECTGGGGG
T ss_pred cchhhhhHHHHhCcCccCCCCCeechhhhcc
Confidence 7899999988555799999999999999854
No 87
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=94.67 E-value=0.02 Score=42.09 Aligned_cols=30 Identities=27% Similarity=0.477 Sum_probs=26.5
Q ss_pred ccccccCCCCCCc---eeecCCCCcccCccccC
Q 048693 377 KHCHACGRPADGF---VYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 377 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~ 406 (539)
.+|+.|++...|+ .|+|..|+|..|..|..
T Consensus 25 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 25 TYCYECEGLLWGIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp CCCTTTCCCCCSSCCEEEEETTTCCEECTTHHH
T ss_pred cChhhcChhhcccCcceeEcCCCCCeeCHHHHh
Confidence 7899999988763 59999999999999974
No 88
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=94.59 E-value=0.011 Score=42.66 Aligned_cols=43 Identities=26% Similarity=0.447 Sum_probs=34.7
Q ss_pred ccccccccCCCCcCCCCccCCC-CC-CceecCCCCcccccccccC
Q 048693 300 AHYLQLKNHKTLSECNGCKRPA-FG-LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l~~~~~~~~C~~C~~~~-~g-~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.|.++-+....+..|+.|+..+ +| ..|+|..|.+..|..|-..
T Consensus 8 ~H~F~~kt~~~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~ 52 (61)
T 4b6d_A 8 LHDFVSKTVIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDR 52 (61)
T ss_dssp CCCEEEEECCSCEECTTTCCEECTTCEEEEESSSSCEECGGGGGG
T ss_pred ceeEEeeeccCCcccccccCEEEEeeEeeECCCCCCeEchhHhhc
Confidence 4666666666788899998887 55 4599999999999999754
No 89
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=94.47 E-value=0.02 Score=41.12 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=27.0
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|+.-+....|+|..|+|..|..|..+
T Consensus 23 t~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 23 GWCDLCGREVLRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp EECTTTCSEECSCCEECTTTSCEECHHHHTT
T ss_pred eEchhcchhhhhCccEeCCCCCeEehhhhhh
Confidence 7899999877555799999999999999854
No 90
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=94.02 E-value=0.01 Score=41.34 Aligned_cols=31 Identities=23% Similarity=0.515 Sum_probs=26.9
Q ss_pred cccccccCCCCCCceeecCCC-CcccCccccCC
Q 048693 376 NKHCHACGRPADGFVYHCEEK-GRNLHPCCFNL 407 (539)
Q Consensus 376 ~~~C~~C~~~~~g~~Y~C~~C-~f~lH~~C~~l 407 (539)
.+.||.|++.+ |..|+|..| +|+|...|...
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~ 37 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNT 37 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHH
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhC
Confidence 37899999985 899999999 59999999754
No 91
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=93.91 E-value=0.076 Score=55.51 Aligned_cols=72 Identities=11% Similarity=0.017 Sum_probs=52.7
Q ss_pred HHHHHHHHHH--HHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHH-hCCCcccccCCcchhhhchHHHHHHH
Q 048693 175 EELNMDLFRK--CIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEF-FNGKRLCKNINPDEAVAYGAAVQAAV 251 (539)
Q Consensus 175 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~-f~~~~v~~~~~p~~avA~GAal~a~~ 251 (539)
..+..-+++. +.-.++..++.... .+.|.++||+++++.+.+++.+. | +.+|..+. ..++.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 3444445553 44455555554432 27899999999999999999999 9 78887774 456889999999865
Q ss_pred H
Q 048693 252 L 252 (539)
Q Consensus 252 ~ 252 (539)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 4
No 92
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=93.15 E-value=0.068 Score=38.49 Aligned_cols=30 Identities=23% Similarity=0.628 Sum_probs=25.3
Q ss_pred ccccccCCCCC--CceeecCCCCcccCccccC
Q 048693 377 KHCHACGRPAD--GFVYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 377 ~~C~~C~~~~~--g~~Y~C~~C~f~lH~~C~~ 406 (539)
..|+.||+.+. ...|+|.+|++..|+.|..
T Consensus 20 ~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 20 ESCVPCGKRIKFGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp EECTTTCCEECTTCEEEEESSSSCEECGGGGG
T ss_pred cccccccCEEEEeeEeeECCCCCCeEchhHhh
Confidence 68999998762 2469999999999999974
No 93
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=93.07 E-value=0.013 Score=57.22 Aligned_cols=18 Identities=28% Similarity=0.553 Sum_probs=16.7
Q ss_pred eEEEEEeCCceeEEEEEE
Q 048693 66 NVLIFDLGGGTFDVSLLA 83 (539)
Q Consensus 66 ~vlvvDiGggTtdisv~~ 83 (539)
..+++|||+.|||+..+.
T Consensus 128 ~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 128 NCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp SEEEEEECSSCEEEEEEE
T ss_pred CEEEEEcCcchhhhhhhc
Confidence 579999999999999997
No 94
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=93.06 E-value=2.5 Score=44.65 Aligned_cols=203 Identities=14% Similarity=0.142 Sum_probs=101.3
Q ss_pred CCCcEEEEe-CCCCCHHHHHHH---HHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEe
Q 048693 10 PVSNAVVTV-PAYFTNSQRQAT---KDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIE 85 (539)
Q Consensus 10 ~v~~vvitV-P~~~~~~~r~~l---~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~ 85 (539)
+++.+++|. |..++.. |--+ +..+...|++.+. |+.-+|=+++..+.... ... +++-+.||+|.+-.+ .
T Consensus 72 ~id~ia~~~gPG~~~~l-~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~--~~p-~~l~vsGg~t~~~~~--~ 144 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSL-RVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEA--EDP-LTLYVSGGNTQVIAY--V 144 (540)
T ss_dssp GCCEEEEEEESSCHHHH-HHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSC--SSC-EEEEECSSCEEEEEE--E
T ss_pred HCcEEEEecCCCchhhH-HHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCC--CCC-cEEEEcCCCcEEEEE--e
Confidence 577887777 6655543 2222 2234445665443 55555544443333222 122 556666778776544 4
Q ss_pred cCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEEccccCCcee
Q 048693 86 KGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTSQTTIEIDSLYEGIDF 165 (539)
Q Consensus 86 ~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~ 165 (539)
.+.+++++...+ .--|+.||.. +.. .+......+ .+++ .|++.+.. +.++....+.++
T Consensus 145 ~~~~~~lg~t~d-~s~G~~~D~~-a~~--------lgl~~~gg~-~ie~---lA~~g~~~--------~~~p~~~~~~~~ 202 (540)
T 3en9_A 145 SKKYRVFGETLD-IAVGNCLDQF-ARY--------VNLPHPGGP-YIEE---LARKGKKL--------VDLPYTVKGMDI 202 (540)
T ss_dssp TTEEEEEEEBSS-SCHHHHHHHH-HHH--------TTCCSSCHH-HHHH---HHHTCCCC--------CCCCCCEETTEE
T ss_pred CCceEEEeeccc-hHhHHHHHHH-HHH--------cCCCCCCHH-HHHH---HHHcCCcc--------CcCCCCCCCcce
Confidence 678888887664 4457778753 222 233322222 2222 22221100 111111112222
Q ss_pred EE-------------EEeHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhC--CC
Q 048693 166 SS-------------VITRARFEELNM-DLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFN--GK 229 (539)
Q Consensus 166 ~~-------------~itr~e~e~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~--~~ 229 (539)
++ ..+.+++...+. .+++.+.+.++++++..+ ++.|+|+||-+.+..+++.+.+... +.
T Consensus 203 sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~ 277 (540)
T 3en9_A 203 AFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNV 277 (540)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTC
T ss_pred ecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCC
Confidence 21 011222322222 233444455555555444 5799999999999999999998763 34
Q ss_pred cccccCC---cchhhhchHH
Q 048693 230 RLCKNIN---PDEAVAYGAA 246 (539)
Q Consensus 230 ~v~~~~~---p~~avA~GAa 246 (539)
++..+.. .|.++.+|.+
T Consensus 278 ~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 278 DFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp EEECCCHHHHSSCHHHHHHH
T ss_pred EEEeCCCcCCCCCHHHHHHH
Confidence 5544421 2445555544
No 95
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=93.00 E-value=0.033 Score=42.90 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=26.7
Q ss_pred ccccccCCCCCCc-----eeecCCCCcccCccccC
Q 048693 377 KHCHACGRPADGF-----VYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 377 ~~C~~C~~~~~g~-----~Y~C~~C~f~lH~~C~~ 406 (539)
.+|+.|+..+.|+ .|.|..|+|.+|..|..
T Consensus 36 T~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 36 TNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp EECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred cchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 7899999977664 79999999999999976
No 96
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=92.90 E-value=0.094 Score=52.17 Aligned_cols=82 Identities=17% Similarity=0.184 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHhccccccC---CCceEEEEEeCCceeEEEEEEE--ecCeeeEEEecCCCCCc
Q 048693 27 RQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAA---SEKNVLIFDLGGGTFDVSLLAI--EKGIFKVKATAGDTHLG 101 (539)
Q Consensus 27 r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~---~~~~vlvvDiGggTtdisv~~~--~~~~~~v~~~~~~~~lG 101 (539)
.+.+.++-+..|++.-.+-.|-+|...+.+...... ....++++|+|||+|+++++.- .+..-++. ...+.++|
T Consensus 105 ~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~-~~~SlplG 183 (343)
T 3cer_A 105 EEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ-GAFSMNIG 183 (343)
T ss_dssp HHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS-EEEEESCC
T ss_pred HHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccc-eeEEEehh
Confidence 344455555669876444445555433333322211 2456999999999999999864 22100001 13346899
Q ss_pred HHHHHHHH
Q 048693 102 GEDFDNRM 109 (539)
Q Consensus 102 G~~id~~l 109 (539)
+..+.+.+
T Consensus 184 ~v~lt~~~ 191 (343)
T 3cer_A 184 SVRMTERH 191 (343)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988765
No 97
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=92.27 E-value=0.085 Score=56.67 Aligned_cols=46 Identities=24% Similarity=0.525 Sum_probs=39.7
Q ss_pred cccccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 297 SHQAHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 297 sHp~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
....|.++......+..|+.|+..++|. .|+|..|+|.+|..|...
T Consensus 515 ~~~~H~F~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 515 TANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp TGGGCCEEEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred cccCCceeEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 3446888888888999999999998774 399999999999999875
No 98
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=91.88 E-value=0.11 Score=54.73 Aligned_cols=77 Identities=17% Similarity=0.200 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcHHHHHH
Q 048693 28 QATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGEDFDN 107 (539)
Q Consensus 28 ~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~id~ 107 (539)
..+.++-+..|++.-.+-.|-+|...+.+...........+|+|+|||+|.+++.+ ++... ...+.++|.-.+.+
T Consensus 100 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrlte 174 (513)
T 1u6z_A 100 DFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPI---LVESRRMGCVSFAQ 174 (513)
T ss_dssp HHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEE---EEEEESCCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeee---EEEEEeccHHHHHH
Confidence 33444444558876444444455443334322221123689999999999999875 33321 23346899998887
Q ss_pred HH
Q 048693 108 RM 109 (539)
Q Consensus 108 ~l 109 (539)
.+
T Consensus 175 ~f 176 (513)
T 1u6z_A 175 LY 176 (513)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 99
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=91.36 E-value=0.13 Score=52.49 Aligned_cols=44 Identities=25% Similarity=0.506 Sum_probs=37.7
Q ss_pred cccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 299 QAHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 299 p~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
..|.+.......+..|+.|+..++|. .|+|..|++.+|..|...
T Consensus 345 ~~h~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 345 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp GGCCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCCCCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 45777777778899999999998774 499999999999999864
No 100
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=91.12 E-value=0.78 Score=37.28 Aligned_cols=80 Identities=23% Similarity=0.513 Sum_probs=55.2
Q ss_pred CCcCCCCccCCCC-CCceecCCCCcccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccCCCC-C
Q 048693 310 TLSECNGCKRPAF-GLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPA-D 387 (539)
Q Consensus 310 ~~~~C~~C~~~~~-g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~-~ 387 (539)
....|..|+..+. ...-.|..|.-.+|..|...+.. + ++.. ...+... .+|.+|++.. .
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~-----~---------~~~~----~W~C~~C-~~C~~C~~~~~~ 66 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVT-----P---------LKRA----GWQCPEC-KVCQNCKQSGED 66 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCC-----T---------TTST----TCCCTTT-CCCTTTCCCSCC
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccc-----c---------cccc----CccCCcC-CcccccCccCCC
Confidence 4567999999874 45589999999999999865321 1 0111 1111111 3688888765 3
Q ss_pred CceeecCCCCcccCccccCCC
Q 048693 388 GFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 388 g~~Y~C~~C~f~lH~~C~~lp 408 (539)
.....|..|+-..|..|..-|
T Consensus 67 ~~ll~Cd~C~~~yH~~Cl~pp 87 (111)
T 2ysm_A 67 SKMLVCDTCDKGYHTFCLQPV 87 (111)
T ss_dssp TTEEECSSSCCEEEGGGSSSC
T ss_pred CCeeECCCCCcHHhHHhcCCc
Confidence 457999999999999998743
No 101
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=89.69 E-value=12 Score=39.54 Aligned_cols=81 Identities=19% Similarity=0.169 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccC-CcchhhhchHHHH
Q 048693 171 RARFEELNMDLF-RKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNI-NPDEAVAYGAAVQ 248 (539)
Q Consensus 171 r~e~e~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~-~p~~avA~GAal~ 248 (539)
..++...++..+ +-+.+.+.++.++.+ ++.|.|+||-+.+..+++.|.+..+-.++..+. -.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 344444444433 333444445554433 679999999999999999998765222443332 3488999999999
Q ss_pred HHHHcCCC
Q 048693 249 AAVLSGNR 256 (539)
Q Consensus 249 a~~~~~~~ 256 (539)
+....|..
T Consensus 355 a~~~~g~~ 362 (576)
T 3ven_A 355 VAVELGDR 362 (576)
T ss_dssp HHHHTTCC
T ss_pred HHHHcCCC
Confidence 98887653
No 102
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=89.65 E-value=6.9 Score=38.01 Aligned_cols=69 Identities=16% Similarity=0.246 Sum_probs=43.2
Q ss_pred CCCcEEEEeCCCCCHH----------------HHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeC
Q 048693 10 PVSNAVVTVPAYFTNS----------------QRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLG 73 (539)
Q Consensus 10 ~v~~vvitVP~~~~~~----------------~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiG 73 (539)
++..+.|++|...+.. -++.+.+. .|++ +.+.++..|+|++-.+.-.......++++-+|
T Consensus 56 ~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~G 131 (321)
T 3vgl_A 56 DVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQR---VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLG 131 (321)
T ss_dssp CEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEES
T ss_pred CceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhhh---hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeC
Confidence 5667777777654432 13344433 4775 78999999999985433222235678888888
Q ss_pred CceeEEEEEE
Q 048693 74 GGTFDVSLLA 83 (539)
Q Consensus 74 ggTtdisv~~ 83 (539)
.| .-..++.
T Consensus 132 tG-iG~gii~ 140 (321)
T 3vgl_A 132 TG-LGGGIII 140 (321)
T ss_dssp SS-EEEEEEE
T ss_pred cc-eEEEEEE
Confidence 87 4455554
No 103
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=89.59 E-value=0.29 Score=51.41 Aligned_cols=76 Identities=20% Similarity=0.238 Sum_probs=46.3
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEEEEecCeeeEEEecCCCCCcHHHHH
Q 048693 27 RQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGEDFD 106 (539)
Q Consensus 27 r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~id 106 (539)
...+.++-+..|++.-.+-.|-+|...+.+...... ....+|+|+|||+|.+++.+ ++.. ....+.++|.-.+.
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~-~~~~lvvDIGGGStEl~~~~--~~~~---~~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFY-QPDGIAGDLGGGSLELIDIK--DKSC---GEGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSS-SCEEEEEEECSSCEEEEEEE--TTEE---CCCEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCceEEEEee--CCee---eeEEEecceEEehh
Confidence 445555555679887444455555444444332221 22459999999999999987 3322 12334678888877
Q ss_pred HH
Q 048693 107 NR 108 (539)
Q Consensus 107 ~~ 108 (539)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 104
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=89.28 E-value=0.92 Score=45.05 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccC----CcchhhhchHHHHHHH
Q 048693 176 ELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNI----NPDEAVAYGAAVQAAV 251 (539)
Q Consensus 176 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~----~p~~avA~GAal~a~~ 251 (539)
++...+.+=+.+.|.+.++.... .++.|++.||++++|.|.++|++.+++.+|.... +|+.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 44444444445555555543321 3679999999999999999999999766554432 3554334447777755
Q ss_pred Hc
Q 048693 252 LS 253 (539)
Q Consensus 252 ~~ 253 (539)
.-
T Consensus 337 ~l 338 (371)
T 3qbx_A 337 FL 338 (371)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 105
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=89.18 E-value=6.3 Score=38.45 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=32.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHHhCC--------CcccccCCcchhhhchHHHHH
Q 048693 203 VDDVVIVGGSARIPKVQQLLQEFFNG--------KRLCKNINPDEAVAYGAAVQA 249 (539)
Q Consensus 203 i~~ViLvGG~s~~p~i~~~l~~~f~~--------~~v~~~~~p~~avA~GAal~a 249 (539)
++.|+|-||.+..+.+.+.|++.+.. .++....-.+.+.++|||..+
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 57899999998887777777776621 233344445678889998754
No 106
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=87.76 E-value=1.6 Score=35.32 Aligned_cols=77 Identities=19% Similarity=0.342 Sum_probs=47.9
Q ss_pred cccccccCCCCC-CceeecCCCCcccCccccCCCCcccCCCeeEEEeccccccccccc--ccccccccccCCCCeEEeec
Q 048693 376 NKHCHACGRPAD-GFVYHCEEKGRNLHPCCFNLPRKLPIDSVEFELSDKQLSKKCIWR--NSKRLQETVCDRWGWSYVSK 452 (539)
Q Consensus 376 ~~~C~~C~~~~~-g~~Y~C~~C~f~lH~~C~~lp~~i~~~~h~~~l~~~~~~~~c~~c--~~~c~~~~~~~~~~~~y~~~ 452 (539)
...|.+|+.... .-...|..|.-..|+.|..++.... ....=.|..| |.+|.+. ......-.|.
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~----------~~~~W~C~~C~~C~~C~~~---~~~~~ll~Cd 73 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPL----------KRAGWQCPECKVCQNCKQS---GEDSKMLVCD 73 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTT----------TSTTCCCTTTCCCTTTCCC---SCCTTEEECS
T ss_pred CCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccc----------cccCccCCcCCcccccCcc---CCCCCeeECC
Confidence 478999988754 3347899999999999998765211 0011123333 2233221 1122356666
Q ss_pred CCCeeecccchhh
Q 048693 453 CKNYHCHAFCSTE 465 (539)
Q Consensus 453 ~~~~~~H~~C~~~ 465 (539)
-|+-.+|..|...
T Consensus 74 ~C~~~yH~~Cl~p 86 (111)
T 2ysm_A 74 TCDKGYHTFCLQP 86 (111)
T ss_dssp SSCCEEEGGGSSS
T ss_pred CCCcHHhHHhcCC
Confidence 7788899999864
No 107
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=87.46 E-value=0.47 Score=36.41 Aligned_cols=45 Identities=20% Similarity=0.366 Sum_probs=34.5
Q ss_pred ccccccccccCCCCcCCCCccCCCCC----CceecCCCCcccccccccC
Q 048693 298 HQAHYLQLKNHKTLSECNGCKRPAFG----LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 298 Hp~H~L~l~~~~~~~~C~~C~~~~~g----~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+..|...--+.....+|..|++.+.. .-|+|.-|...+|..|...
T Consensus 25 ~~~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~ 73 (84)
T 1r79_A 25 AMPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKES 73 (84)
T ss_dssp CBCCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHH
T ss_pred cceeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHh
Confidence 33466666566667899999998743 2399999999999999754
No 108
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.08 E-value=0.28 Score=50.91 Aligned_cols=43 Identities=23% Similarity=0.563 Sum_probs=37.2
Q ss_pred ccccccccCCCCcCCCCccCCCCCC---ceecCCCCcccccccccC
Q 048693 300 AHYLQLKNHKTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 300 ~H~L~l~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~ 342 (539)
.|-+.......+..|+.|+..++|. .|+|..|++..|..|...
T Consensus 209 ~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~ 254 (463)
T 3cxl_A 209 IHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKM 254 (463)
T ss_dssp CCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTT
T ss_pred CcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCcccccccccc
Confidence 4777777777899999999999875 499999999999999865
No 109
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=86.97 E-value=0.33 Score=52.02 Aligned_cols=45 Identities=20% Similarity=0.414 Sum_probs=35.2
Q ss_pred CCCceeEeccCCCCCCCCcCcCCcccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 353 FGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 353 ~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
...|.|...+...+ ..|+.|+....|. .|+|..|++.+|..|...
T Consensus 516 ~~~H~F~~~~~~~~----------t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 516 ANGHDFQMFSFEET----------TSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp GGGCCEEEECCSSC----------CBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred ccCCceeEEeCCCC----------cccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 34578887665433 7899999977554 599999999999999863
No 110
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=86.51 E-value=2.1 Score=46.05 Aligned_cols=66 Identities=15% Similarity=0.125 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccC---CcchhhhchHHHHHHHH
Q 048693 182 FRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNI---NPDEAVAYGAAVQAAVL 252 (539)
Q Consensus 182 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~---~p~~avA~GAal~a~~~ 252 (539)
++.+.+.+.++.++. .++.|+|+||-+.+.+|++.+.+.+.+.++..+. -.|.++|+|.+++|+..
T Consensus 584 a~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~~ 652 (657)
T 3ttc_A 584 AQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAAR 652 (657)
T ss_dssp HHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHHH
Confidence 344444455555443 3579999999999999999999988555554432 23889999999988644
No 111
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=85.95 E-value=3 Score=44.57 Aligned_cols=82 Identities=18% Similarity=0.163 Sum_probs=56.8
Q ss_pred eEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHH-HHhCCCcccccCCcchhhhc
Q 048693 165 FSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQ-EFFNGKRLCKNINPDEAVAY 243 (539)
Q Consensus 165 ~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~-~~f~~~~v~~~~~p~~avA~ 243 (539)
-.+.||..+++++.. .-..|..-++-+|++++++..+|+.|+|.||++.---+.+.+. -.+|.........--.+.-.
T Consensus 498 ~~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~ 576 (631)
T 3zyy_X 498 KDIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDIDINKFSYVGNSSLK 576 (631)
T ss_dssp SCEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSCGGGEEECSCHHHH
T ss_pred CcEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCccccCEEEECcHHHH
Confidence 347899999998743 3466778888899999999999999999999998777777665 34454322221111234455
Q ss_pred hHHH
Q 048693 244 GAAV 247 (539)
Q Consensus 244 GAal 247 (539)
||.+
T Consensus 577 GA~~ 580 (631)
T 3zyy_X 577 GARK 580 (631)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 112
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=85.17 E-value=0.79 Score=34.30 Aligned_cols=35 Identities=34% Similarity=0.750 Sum_probs=28.7
Q ss_pred CCCcCCCCccCCCCC-CceecCCCCcccccccccCC
Q 048693 309 KTLSECNGCKRPAFG-LMYRCELCNFNLHIPCMFIY 343 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~p 343 (539)
.....|..|+.+..+ .+-.|..|+--+|..|..++
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~ 51 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIM 51 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCS
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCC
Confidence 345669999998765 57899999999999999763
No 113
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=85.10 E-value=1.8 Score=42.94 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCccccc----CCcc--hhhhchHHHH
Q 048693 175 EELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKN----INPD--EAVAYGAAVQ 248 (539)
Q Consensus 175 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~----~~p~--~avA~GAal~ 248 (539)
+++...+.+=+.+.|.+.++... ..+.|++.||++++|.|.++|++.+++.+|... ++|+ ||+| -|++
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~a--FA~L 339 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIA--FAWL 339 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHH--HHHH
Confidence 34455555555556666665432 356899999999999999999999976555332 2444 5544 5666
Q ss_pred HHHHc
Q 048693 249 AAVLS 253 (539)
Q Consensus 249 a~~~~ 253 (539)
|...-
T Consensus 340 A~~~l 344 (370)
T 3cqy_A 340 AMRYQ 344 (370)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 114
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=84.96 E-value=0.47 Score=48.23 Aligned_cols=44 Identities=23% Similarity=0.487 Sum_probs=33.7
Q ss_pred CceeEeccCCCCCCCCcCcCCcccccccCCCCCCc---eeecCCCCcccCccccC-CC
Q 048693 355 NFTFKFLPSLGACSTKDCIDCNKHCHACGRPADGF---VYHCEEKGRNLHPCCFN-LP 408 (539)
Q Consensus 355 ~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~-lp 408 (539)
.|.+...+... ...|+.|+....|+ .|+|..|++.+|..|.. +|
T Consensus 346 ~h~f~~~~~~~----------~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~ 393 (406)
T 2vrw_B 346 GHDFQMFSFEE----------TTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP 393 (406)
T ss_dssp GCCEEEECCSS----------CCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC
T ss_pred CCCCccccCCC----------CCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC
Confidence 46666655433 37899999987664 59999999999999974 44
No 115
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=83.48 E-value=1.9 Score=47.22 Aligned_cols=52 Identities=27% Similarity=0.330 Sum_probs=41.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHHhC--CCcccccC-C--cchhhhchHHHHHHHHcC
Q 048693 203 VDDVVIVGGSARIPKVQQLLQEFFN--GKRLCKNI-N--PDEAVAYGAAVQAAVLSG 254 (539)
Q Consensus 203 i~~ViLvGG~s~~p~i~~~l~~~f~--~~~v~~~~-~--p~~avA~GAal~a~~~~~ 254 (539)
++.|+|+||-+.+.+|++.|.+.+. +.++..+. - .|.++|+|.|++|+...+
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 5799999999999999999998872 44554432 2 388999999999977654
No 116
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=83.07 E-value=3.2 Score=45.64 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhC--CCcccccCC---cchhhhchHHHHHHHH
Q 048693 184 KCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCKNIN---PDEAVAYGAAVQAAVL 252 (539)
Q Consensus 184 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~--~~~v~~~~~---p~~avA~GAal~a~~~ 252 (539)
.+.+.+.++.++. .++.|+|+||-+.+..+++.+.+.+. |.++..+.. .|..+|+|.|++|+..
T Consensus 692 ~L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 692 AFAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 3344455555543 36789999999999999999999874 345554432 3888999999888554
No 117
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=82.76 E-value=1.8 Score=35.28 Aligned_cols=80 Identities=25% Similarity=0.569 Sum_probs=51.6
Q ss_pred CCCCccCCC--------CCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccCC
Q 048693 313 ECNGCKRPA--------FGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACGR 384 (539)
Q Consensus 313 ~C~~C~~~~--------~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~ 384 (539)
.|+.|.... .+..-.|..|.-..|..|...+.. .....+... ..+... ..|.+|++
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~-----------~~~~~~~~~----W~C~~C-~~C~~C~~ 66 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLN-----------MTEAVKTYK----WQCIEC-KSCILCGT 66 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHH-----------HHHHHHHTT----CCCGGG-CCCTTTTC
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhh-----------hhhccCCCc----cCcccc-CccCcccc
Confidence 588886543 246689999999999999864211 001111111 111111 36888887
Q ss_pred CC-CCceeecCCCCcccCccccCCC
Q 048693 385 PA-DGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 385 ~~-~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
.. .+....|..|+-..|..|..-|
T Consensus 67 ~~~~~~ll~Cd~C~~~yH~~Cl~pp 91 (114)
T 2kwj_A 67 SENDDQLLFCDDCDRGYHMYCLNPP 91 (114)
T ss_dssp CTTTTTEEECSSSCCEEETTTSSSC
T ss_pred cCCCCceEEcCCCCccccccccCCC
Confidence 54 5678899999999999998743
No 118
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=82.40 E-value=2.4 Score=40.77 Aligned_cols=50 Identities=14% Similarity=0.247 Sum_probs=38.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHHHHH
Q 048693 202 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVL 252 (539)
Q Consensus 202 ~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a~~~ 252 (539)
+++.|+|.||.+..+.+.+.+++.++..++..+. .+.+.+.||+..+...
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 3578999999887788888888887544566665 6688999999988654
No 119
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=81.32 E-value=1.4 Score=31.73 Aligned_cols=36 Identities=25% Similarity=0.526 Sum_probs=30.7
Q ss_pred CcccccccCCCC--CCceeecCCCCcccCccccCCCCc
Q 048693 375 CNKHCHACGRPA--DGFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
...+|..|+++. .++.-.|..|+-=+|..|+.|+..
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~ 42 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPA 42 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChh
Confidence 457899999875 577899999998899999999764
No 120
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=80.64 E-value=0.83 Score=37.22 Aligned_cols=81 Identities=22% Similarity=0.494 Sum_probs=51.8
Q ss_pred CcCCCCccCC------C-CCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccC
Q 048693 311 LSECNGCKRP------A-FGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACG 383 (539)
Q Consensus 311 ~~~C~~C~~~------~-~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~ 383 (539)
...|..|... + .+....|+.|+-..|..|....++. . ..++.. ...+... .+|.+|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~----------~-~~~~~~----~W~C~~C-~~C~vC~ 68 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPEL----------T-VRVKAL----RWQCIEC-KTCSSCR 68 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHH----------H-HHHHTS----CCCCTTT-CCBTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHH----------H-HHhhcc----ccccccC-Ccccccc
Confidence 3457788654 2 3467999999999999998642110 0 001111 1122222 4688998
Q ss_pred CCC--CCceeecCCCCcccCccccCC
Q 048693 384 RPA--DGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 384 ~~~--~g~~Y~C~~C~f~lH~~C~~l 407 (539)
+.. .+....|..|+-..|..|..-
T Consensus 69 ~~~~~~~~ll~Cd~C~~~yH~~Cl~p 94 (112)
T 3v43_A 69 DQGKNADNMLFCDSCDRGFHMECCDP 94 (112)
T ss_dssp CCCCTTCCCEECTTTCCEECGGGCSS
T ss_pred CcCCCccceEEcCCCCCeeecccCCC
Confidence 753 356789999999999999753
No 121
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=80.44 E-value=44 Score=32.36 Aligned_cols=61 Identities=7% Similarity=0.029 Sum_probs=42.8
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeeeechhHHHHHHhccccccCCCceEEEEEeCCcee
Q 048693 10 PVSNAVVTVPAYFTNSQRQATKDAGAMA-G--LNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTF 77 (539)
Q Consensus 10 ~v~~vvitVP~~~~~~~r~~l~~aa~~A-G--l~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTt 77 (539)
++..+.|++|...+......+++..+.. + ...+.+.++..|+|+++ + +...+++-+|.|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~------~~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T------PDGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C------SSCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C------CCCcEEEEEcCCce
Confidence 5788999999999877666676666554 3 14678999999999984 2 12345555666653
No 122
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=80.06 E-value=0.78 Score=37.37 Aligned_cols=80 Identities=18% Similarity=0.294 Sum_probs=46.2
Q ss_pred ccccccCCC-------CCCceeecCCCCcccCccccCCCCcccCCCeeEEEeccccccccccc--ccccccccccCCCCe
Q 048693 377 KHCHACGRP-------ADGFVYHCEEKGRNLHPCCFNLPRKLPIDSVEFELSDKQLSKKCIWR--NSKRLQETVCDRWGW 447 (539)
Q Consensus 377 ~~C~~C~~~-------~~g~~Y~C~~C~f~lH~~C~~lp~~i~~~~h~~~l~~~~~~~~c~~c--~~~c~~~~~~~~~~~ 447 (539)
-+|..|... ..+-...|..|+-..|+.|..+...+... + .. ..=.|..| |.+|... ....+-
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~-----~-~~-~~W~C~~C~~C~vC~~~--~~~~~~ 76 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVR-----V-KA-LRWQCIECKTCSSCRDQ--GKNADN 76 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHH-----H-HT-SCCCCTTTCCBTTTCCC--CCTTCC
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHH-----h-hc-cccccccCCccccccCc--CCCccc
Confidence 578889653 23467899999999999999874322100 0 01 01123333 2233221 011234
Q ss_pred EEeecCCCeeecccchhh
Q 048693 448 SYVSKCKNYHCHAFCSTE 465 (539)
Q Consensus 448 ~y~~~~~~~~~H~~C~~~ 465 (539)
.-.|+.|+..+|..|...
T Consensus 77 ll~Cd~C~~~yH~~Cl~p 94 (112)
T 3v43_A 77 MLFCDSCDRGFHMECCDP 94 (112)
T ss_dssp CEECTTTCCEECGGGCSS
T ss_pred eEEcCCCCCeeecccCCC
Confidence 556677899999999853
No 123
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=79.82 E-value=5.5 Score=38.70 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=28.8
Q ss_pred cCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEE
Q 048693 37 AGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLL 82 (539)
Q Consensus 37 AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~ 82 (539)
.+++ +.+.++..|+|++-.+.........++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 3665 7899999999987533222123567788888887 334444
No 124
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=78.92 E-value=1.4 Score=35.96 Aligned_cols=78 Identities=15% Similarity=0.221 Sum_probs=46.3
Q ss_pred cccccCCCC--------CCceeecCCCCcccCccccCCCCcccCCCeeEEEeccccccccccc--ccccccccccCCCCe
Q 048693 378 HCHACGRPA--------DGFVYHCEEKGRNLHPCCFNLPRKLPIDSVEFELSDKQLSKKCIWR--NSKRLQETVCDRWGW 447 (539)
Q Consensus 378 ~C~~C~~~~--------~g~~Y~C~~C~f~lH~~C~~lp~~i~~~~h~~~l~~~~~~~~c~~c--~~~c~~~~~~~~~~~ 447 (539)
+|+.|.... .+-.-.|..|.-..|+.|..++..+.. ....... .|..| |.+|... ...+-
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~------~~~~~~W-~C~~C~~C~~C~~~---~~~~~ 72 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTE------AVKTYKW-QCIECKSCILCGTS---ENDDQ 72 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHH------HHHHTTC-CCGGGCCCTTTTCC---TTTTT
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhh------ccCCCcc-CccccCccCccccc---CCCCc
Confidence 588885432 245688999999999999987653210 0011111 23333 2334321 11345
Q ss_pred EEeecCCCeeecccchhh
Q 048693 448 SYVSKCKNYHCHAFCSTE 465 (539)
Q Consensus 448 ~y~~~~~~~~~H~~C~~~ 465 (539)
.-.|.-|+-.+|..|..-
T Consensus 73 ll~Cd~C~~~yH~~Cl~p 90 (114)
T 2kwj_A 73 LLFCDDCDRGYHMYCLNP 90 (114)
T ss_dssp EEECSSSCCEEETTTSSS
T ss_pred eEEcCCCCccccccccCC
Confidence 666777889999999864
No 125
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=78.90 E-value=5.5 Score=31.95 Aligned_cols=70 Identities=19% Similarity=0.352 Sum_probs=46.4
Q ss_pred CCcCCCCccCCCCCCceecC--CCCcccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccCCCCC
Q 048693 310 TLSECNGCKRPAFGLMYRCE--LCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPAD 387 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~--~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~~ 387 (539)
....|..|+. .|....|+ .|+-.+|..|..+.. -| . + ...+. .-.|..||+...
T Consensus 14 ~~~~C~~C~~--~G~ll~CD~~~Cp~~fH~~Cl~L~~-----~P-----------~--g--~W~Cp--~c~C~~C~k~~~ 69 (107)
T 4gne_A 14 HEDYCFQCGD--GGELVMCDKKDCPKAYHLLCLNLTQ-----PP-----------Y--G--KWECP--WHQCDECSSAAV 69 (107)
T ss_dssp SCSSCTTTCC--CSEEEECCSTTCCCEECTGGGTCSS-----CC-----------S--S--CCCCG--GGBCTTTCSBCC
T ss_pred CCCCCCcCCC--CCcEeEECCCCCCcccccccCcCCc-----CC-----------C--C--CEECC--CCCCCcCCCCCC
Confidence 4556999984 45679999 899999999986411 11 0 0 00000 134677777643
Q ss_pred CceeecCCCCcccCccccC
Q 048693 388 GFVYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 388 g~~Y~C~~C~f~lH~~C~~ 406 (539)
|.|..|...+|..|..
T Consensus 70 ---~~C~~Cp~sfC~~c~~ 85 (107)
T 4gne_A 70 ---SFCEFCPHSFCKDHEK 85 (107)
T ss_dssp ---EECSSSSCEECTTTCT
T ss_pred ---cCcCCCCcchhhhccC
Confidence 8999999888888863
No 126
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=78.72 E-value=2.3 Score=42.23 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=33.3
Q ss_pred HHHHHHHHHHH-c-------CCceeeeechhHHHHHHh-----cccccc-CCCceEEEEEeCCceeEEEEEE
Q 048693 26 QRQATKDAGAM-A-------GLNVLNIISEPTAAAIAC-----GLDRKA-ASEKNVLIFDLGGGTFDVSLLA 83 (539)
Q Consensus 26 ~r~~l~~aa~~-A-------Gl~~~~li~Ep~AAa~~~-----~~~~~~-~~~~~vlvvDiGggTtdisv~~ 83 (539)
+++.+.+.++. . |+. +.+|+-.+=|.+.| ++.... ...+.++|+|+|||+|.+++..
T Consensus 88 ~~~~~l~~v~~~~~~~~~~~g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 88 QQKKYYDELEYWFRQQSQWQLVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhCCCCCCCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 35555555444 3 554 56665544444433 232211 1234699999999999999874
No 127
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=77.95 E-value=0.9 Score=33.65 Aligned_cols=33 Identities=18% Similarity=0.553 Sum_probs=28.1
Q ss_pred ccccccCCCC---CCceeecCCCCcccCccccCCCC
Q 048693 377 KHCHACGRPA---DGFVYHCEEKGRNLHPCCFNLPR 409 (539)
Q Consensus 377 ~~C~~C~~~~---~g~~Y~C~~C~f~lH~~C~~lp~ 409 (539)
..|.+|++.. .+....|..|+.-+|..|..+|.
T Consensus 17 ~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~ 52 (71)
T 2ku3_A 17 AVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY 52 (71)
T ss_dssp CSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc
Confidence 7899998763 56778999999999999998873
No 128
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=76.35 E-value=2.5 Score=30.86 Aligned_cols=35 Identities=23% Similarity=0.489 Sum_probs=29.5
Q ss_pred CcccccccCCCCCC-ceeecCCCCcccCccccCCCCc
Q 048693 375 CNKHCHACGRPADG-FVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
...+| .|+++..+ +.-.|..|+-=.|..|+.++..
T Consensus 18 ~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~ 53 (68)
T 3o70_A 18 GLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKS 53 (68)
T ss_dssp TCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTT
T ss_pred CceEe-ECCCcCCCCCEEECCCCCccccccccCcCcc
Confidence 35789 99987654 7899999999999999998764
No 129
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=76.27 E-value=2.6 Score=32.25 Aligned_cols=48 Identities=13% Similarity=0.098 Sum_probs=31.9
Q ss_pred eeEEEecc--cccccccccccccccccccCCCCeEEeecCCCeeecccchhhhh
Q 048693 416 VEFELSDK--QLSKKCIWRNSKRLQETVCDRWGWSYVSKCKNYHCHAFCSTEML 467 (539)
Q Consensus 416 h~~~l~~~--~~~~~c~~c~~~c~~~~~~~~~~~~y~~~~~~~~~H~~C~~~~~ 467 (539)
+.|.+... +.+++|..|...|... ...--|+|..|.+.+|.+|...+.
T Consensus 26 ~~H~WveGNl~~~s~C~vC~k~c~s~----~~L~g~rC~WCq~~VH~~C~~~~~ 75 (84)
T 1r79_A 26 MPHQWLEGNLPVSAKCTVCDKTCGSV----LRLQDWRCLWCKAMVHTSCKESLL 75 (84)
T ss_dssp BCCCEEESCCCTTCBCSSSCCBCCCT----TTCCCEEESSSCCEECHHHHHHCC
T ss_pred ceeeEEccCCCCCCEeCCCCCEeCCc----cCCCCCCCcccChhHHHHHHHhcc
Confidence 44555443 3356888887666432 123455899999999999998773
No 130
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=75.85 E-value=8.2 Score=36.74 Aligned_cols=50 Identities=16% Similarity=0.101 Sum_probs=33.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHHhC-----------CCcccccCCcchhhhchHHHHHHHH
Q 048693 203 VDDVVIVGGSARIPKVQQLLQEFFN-----------GKRLCKNINPDEAVAYGAAVQAAVL 252 (539)
Q Consensus 203 i~~ViLvGG~s~~p~i~~~l~~~f~-----------~~~v~~~~~p~~avA~GAal~a~~~ 252 (539)
++.|+|.||.+..+.+.+.+++.+. ..++....-.+.+.++||+..+...
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~~ 288 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQE 288 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHHh
Confidence 4689999998877777666665541 1234444445678999999887543
No 131
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=75.35 E-value=8.5 Score=37.34 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=33.9
Q ss_pred CCeEEEEcCCCCh-HHHHHHHHHHh---------CCCcccccCCcchhhhchHHHHHH
Q 048693 203 VDDVVIVGGSARI-PKVQQLLQEFF---------NGKRLCKNINPDEAVAYGAAVQAA 250 (539)
Q Consensus 203 i~~ViLvGG~s~~-p~i~~~l~~~f---------~~~~v~~~~~p~~avA~GAal~a~ 250 (539)
++.|+|.||.++. +.+.+.|++.+ ...++..+.-.+.+.++||+.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 5799999999876 66666665544 123455565677899999998763
No 132
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=73.97 E-value=1.7 Score=33.61 Aligned_cols=44 Identities=20% Similarity=0.489 Sum_probs=33.3
Q ss_pred cccccccccCCCCcCCCCccCCCCCCceecCC--CCcccccccccC
Q 048693 299 QAHYLQLKNHKTLSECNGCKRPAFGLMYRCEL--CNFNLHIPCMFI 342 (539)
Q Consensus 299 p~H~L~l~~~~~~~~C~~C~~~~~g~~Y~C~~--C~f~lH~~Ca~~ 342 (539)
..|.|......-...|..|++...|..-.|.. |.-.+|..||..
T Consensus 5 ~~~~~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 5 HHHHMNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp ----CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHH
T ss_pred cccccCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHH
Confidence 34667666655567899999887788899975 999999999964
No 133
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=73.67 E-value=2.7 Score=31.02 Aligned_cols=41 Identities=22% Similarity=0.499 Sum_probs=29.7
Q ss_pred cccccccCCCCcCCCCccCCC---CCCceecCCCCcccccccccC
Q 048693 301 HYLQLKNHKTLSECNGCKRPA---FGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 301 H~L~l~~~~~~~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
|.++... .....|..|+... .+..-.|+.|+-.+|..|...
T Consensus 7 ~~~~~~~-~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~ 50 (71)
T 2ku3_A 7 HHMQSLI-DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGV 50 (71)
T ss_dssp ---CCCC-CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTC
T ss_pred cccccCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCC
Confidence 4454433 4566799998875 456799999999999999864
No 134
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=72.79 E-value=1.2 Score=33.17 Aligned_cols=36 Identities=22% Similarity=0.450 Sum_probs=30.4
Q ss_pred CcccccccCCCCCC-ceeecCCCCcccCccccCCCCc
Q 048693 375 CNKHCHACGRPADG-FVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
...+|.+|++...+ ..-.|..|+--.|..|..++..
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~ 53 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAA 53 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSC
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCcc
Confidence 34789999997665 6889999999999999998764
No 135
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=72.06 E-value=5.2 Score=41.12 Aligned_cols=44 Identities=16% Similarity=0.226 Sum_probs=28.2
Q ss_pred ceeeeechhHHHHHHh-----cccccc----------CCCceEEEEEeCCceeEEEEEE
Q 048693 40 NVLNIISEPTAAAIAC-----GLDRKA----------ASEKNVLIFDLGGGTFDVSLLA 83 (539)
Q Consensus 40 ~~~~li~Ep~AAa~~~-----~~~~~~----------~~~~~vlvvDiGggTtdisv~~ 83 (539)
..+.+|+-.+=|.+++ ++.... .....++|+|+|||+|.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 4678887655544444 222110 1145689999999999999874
No 136
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=71.85 E-value=4.2 Score=28.92 Aligned_cols=34 Identities=21% Similarity=0.553 Sum_probs=27.5
Q ss_pred cCCCCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 307 NHKTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 307 ~~~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+......|..|+.. +..-.|..|+-.+|..|...
T Consensus 7 ~~~~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p 40 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG--GEIILCDTCPRAYHMVCLDP 40 (61)
T ss_dssp SSCCCSSCTTTSCC--SSEEECSSSSCEEEHHHHCT
T ss_pred cCCCCCCCccCCCC--CcEEECCCCChhhhhhccCC
Confidence 33456779999984 57799999999999999864
No 137
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.76 E-value=1.9 Score=44.57 Aligned_cols=31 Identities=26% Similarity=0.577 Sum_probs=26.9
Q ss_pred ccccccCCCCCCc---eeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGF---VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~---~Y~C~~C~f~lH~~C~~l 407 (539)
.+|+.|+.-..|. .|+|..|++..|..|...
T Consensus 221 t~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~ 254 (463)
T 3cxl_A 221 HWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKM 254 (463)
T ss_dssp CBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTT
T ss_pred CcchhhhhhhhhHHhcCeeccccCcccccccccc
Confidence 7899999877664 599999999999999854
No 138
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=70.31 E-value=9.3 Score=36.59 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=37.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHHhCC-----CcccccCCcchhhhchHHHHHHHHc
Q 048693 203 VDDVVIVGGSARIPKVQQLLQEFFNG-----KRLCKNINPDEAVAYGAAVQAAVLS 253 (539)
Q Consensus 203 i~~ViLvGG~s~~p~i~~~l~~~f~~-----~~v~~~~~p~~avA~GAal~a~~~~ 253 (539)
++.|+|.||.+..+.+.+.|++.+.. .++..+.-.+.+.++||+.++....
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~~ 293 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEE 293 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHHh
Confidence 57899999998877777888877732 2344455567899999998876543
No 139
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=69.93 E-value=33 Score=31.87 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=0.0
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHHc-CCceeeeechhH------------------HHHHHhccccccCCCceEEEE
Q 048693 10 PVSNAVVTVPAYFTNSQRQATKDAGAMA-GLNVLNIISEPT------------------AAAIACGLDRKAASEKNVLIF 70 (539)
Q Consensus 10 ~v~~vvitVP~~~~~~~r~~l~~aa~~A-Gl~~~~li~Ep~------------------AAa~~~~~~~~~~~~~~vlvv 70 (539)
+++.++|+.|. +.....++++++.. +.+.+.+ .... |++++....- +..++||
T Consensus 56 ~i~~i~IsSVv---p~~~~~~~~~~~~~~~~~p~~v-~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~----~~~~iVv 127 (249)
T 3bex_A 56 EIKGIGVASVV---PTQNTVIERFSQKYFHISPIWV-KAKNGCVKWNVKNPSEVGADRVANVVAFVKEY----GKNGIII 127 (249)
T ss_dssp GEEEEEEEESC---HHHHHHHHHHHHHHHSCCCEEC-CCCSSSSEECSSCGGGSCHHHHHHHHHHHHHT----CSCEEEE
T ss_pred cCCEEEEEcCc---HHHHHHHHHHHHHhcCCCeEEE-EccCCCceeccCChhhcCHHHHHHHHHHHHHc----CCCEEEE
Q ss_pred EeCCceeEEEEEEEecCeeeEEEecCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHcCCCC
Q 048693 71 DLGGGTFDVSLLAIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCERAKRTLSSTS 150 (539)
Q Consensus 71 DiGggTtdisv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~ls~~~ 150 (539)
|+|..|| +.++ -++...--.=..| .....+.+.+....-...
T Consensus 128 D~GTA~T-~d~v-~~g~~lGG~I~PG-------------i~l~~~aL~~~ta~Lp~v----------------------- 169 (249)
T 3bex_A 128 DMGTATT-VDLV-VNGSYEGGAILPG-------------FFMMVHSLFRGTAKLPLV----------------------- 169 (249)
T ss_dssp EESSEEE-EEEE-ETTEEEEEEEEEC-------------HHHHHHHHHHTCSSCCCC-----------------------
T ss_pred EcCCceE-EEEE-eCCeEeeEEECcc-------------HHHHHHHHHHhhhcCCCC-----------------------
Q ss_pred eEEEEEccccCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCCh
Q 048693 151 QTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARI 215 (539)
Q Consensus 151 ~~~~~i~~~~~~~~~~~~itr~e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~ 215 (539)
+...-...+-++..+.+-.-++......|+..+++..... .--.|+++||.+.+
T Consensus 170 ----------~~~~~~~~~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~-~~~~vi~TGG~a~~ 223 (249)
T 3bex_A 170 ----------EVKPADFVVGKDTEENIRLGVVNGSVYALEGIIGRIKEVY-GDLPVVLTGGQSKI 223 (249)
T ss_dssp ----------CCCCCCSSSBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEEESTTSGG
T ss_pred ----------cccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCChHH
No 140
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=68.67 E-value=6.3 Score=30.33 Aligned_cols=31 Identities=23% Similarity=0.499 Sum_probs=25.5
Q ss_pred CcccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 375 CNKHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
....|.+|++. |-...|..|+...|..|..-
T Consensus 24 n~~~C~vC~~~--g~LL~CD~C~~~fH~~Cl~P 54 (88)
T 1fp0_A 24 SATICRVCQKP--GDLVMCNQCEFCFHLDCHLP 54 (88)
T ss_dssp SSSCCSSSCSS--SCCEECTTSSCEECTTSSST
T ss_pred CCCcCcCcCCC--CCEEECCCCCCceecccCCC
Confidence 34789999986 45778999999999999753
No 141
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=68.65 E-value=7.4 Score=30.63 Aligned_cols=32 Identities=34% Similarity=0.667 Sum_probs=25.9
Q ss_pred CCcCCCCccCCC-CCCceecCCCCcccccccccC
Q 048693 310 TLSECNGCKRPA-FGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 310 ~~~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+...| .|+... .+.+-.|..|+--.|..|...
T Consensus 27 d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~ 59 (98)
T 2lv9_A 27 DVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGI 59 (98)
T ss_dssp CBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTC
T ss_pred CCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCC
Confidence 34568 688876 567799999999999999864
No 142
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=67.13 E-value=15 Score=35.39 Aligned_cols=48 Identities=27% Similarity=0.293 Sum_probs=33.0
Q ss_pred CCeEEEEcCCCC-hHHHHHHHHHHhC---------CCcccccCCcchhhhchHHHHHH
Q 048693 203 VDDVVIVGGSAR-IPKVQQLLQEFFN---------GKRLCKNINPDEAVAYGAAVQAA 250 (539)
Q Consensus 203 i~~ViLvGG~s~-~p~i~~~l~~~f~---------~~~v~~~~~p~~avA~GAal~a~ 250 (539)
++.|+|.||.+. .+.+.+.+++.+. ..++......+.+.++||+.++.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 468999999886 5777777766552 12344444566788999998764
No 143
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=66.78 E-value=2.1 Score=33.07 Aligned_cols=30 Identities=20% Similarity=0.443 Sum_probs=26.3
Q ss_pred ccccccCCCCCCceeecCC--CCcccCccccC
Q 048693 377 KHCHACGRPADGFVYHCEE--KGRNLHPCCFN 406 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~--C~f~lH~~C~~ 406 (539)
..|..|++...|-.-.|.. |.-.+|+.||.
T Consensus 18 l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 18 LTCYLCKQKGVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCBTTTTBCCSSCEEECSCTTTCCEEEHHHHH
T ss_pred CCCcCCCCCCCcEeEecCCCCCCCcCcHHHHH
Confidence 7899998876788899987 99999999985
No 144
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=66.71 E-value=8.1 Score=36.68 Aligned_cols=47 Identities=21% Similarity=0.212 Sum_probs=33.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHHhCCC------cccccCCcchhhhchHHHHH
Q 048693 203 VDDVVIVGGSARIPKVQQLLQEFFNGK------RLCKNINPDEAVAYGAAVQA 249 (539)
Q Consensus 203 i~~ViLvGG~s~~p~i~~~l~~~f~~~------~v~~~~~p~~avA~GAal~a 249 (539)
++.|+|.||.+..+.+.+.+++.+... ++......+.+.++||+.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 468999998876677888888776432 23334445678899999875
No 145
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=66.19 E-value=16 Score=28.12 Aligned_cols=31 Identities=26% Similarity=0.845 Sum_probs=25.7
Q ss_pred CCCcCCCCccCCCCCCceecCCCCccccccccc
Q 048693 309 KTLSECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
+....|..|+..+ ....|..|+-.+|..|..
T Consensus 23 ~n~~~C~vC~~~g--~LL~CD~C~~~fH~~Cl~ 53 (88)
T 1fp0_A 23 DSATICRVCQKPG--DLVMCNQCEFCFHLDCHL 53 (88)
T ss_dssp SSSSCCSSSCSSS--CCEECTTSSCEECTTSSS
T ss_pred CCCCcCcCcCCCC--CEEECCCCCCceecccCC
Confidence 3566799999764 578999999999999975
No 146
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=66.01 E-value=3.2 Score=33.82 Aligned_cols=82 Identities=12% Similarity=0.284 Sum_probs=43.7
Q ss_pred CCCCccCCCCCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccCC-----CCC
Q 048693 313 ECNGCKRPAFGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACGR-----PAD 387 (539)
Q Consensus 313 ~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~-----~~~ 387 (539)
.|.+|... .|..|++.+|..|...|.. .... ....-......... ..-..|..|+. +..
T Consensus 9 ~C~~C~~~------~C~~C~~c~~~~~~~~~~~--~~~~----c~~~~~~~~~~~~~----~~c~~c~~c~~c~~~~~~~ 72 (117)
T 4bbq_A 9 KCKACVQG------ECGVCHYCRDMKKFGGPGR--MKQS----CVLRQCLAPRLPHS----VTCSLCGEVDQNEETQDFE 72 (117)
T ss_dssp CSHHHHSC------CCSCSHHHHHSGGGTSCCC--SCCC----CGGGCCSSCBCCTT----CBCTTTCCBCCHHHHCCGG
T ss_pred cCcCcCCc------CCCCCCCCcCCcccCCCCc--cccc----hhheeecccccccc----ccccccCcccccccccccC
Confidence 47777664 3999999999998754211 1100 00000000000000 01133444443 122
Q ss_pred CceeecCCCCcccCccccCCCCc
Q 048693 388 GFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 388 g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
.....|..|+--+|..|..++..
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~ 95 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGE 95 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCC
T ss_pred cceEEeeecCCeEECCCCCCCcc
Confidence 33568999999999999988754
No 147
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=65.56 E-value=4.6 Score=31.28 Aligned_cols=35 Identities=20% Similarity=0.422 Sum_probs=28.6
Q ss_pred CcccccccCCCCCCceeecCCCC---cccCccccCCCCc
Q 048693 375 CNKHCHACGRPADGFVYHCEEKG---RNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~C~~lp~~ 410 (539)
...+| .|++...|..-.|..|+ --+|..|..|+..
T Consensus 25 ~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~ 62 (90)
T 2jmi_A 25 EEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQA 62 (90)
T ss_dssp CSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSC
T ss_pred CCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcC
Confidence 45789 89998778888999976 4689999998753
No 148
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=65.26 E-value=3 Score=29.88 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=28.4
Q ss_pred CcccccccCCCCCCceeecCCCC---cccCccccCCCCc
Q 048693 375 CNKHCHACGRPADGFVYHCEEKG---RNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~C~~lp~~ 410 (539)
...+| .|++...|..-.|..|+ --+|..|..|+..
T Consensus 10 e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~ 47 (62)
T 2g6q_A 10 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYK 47 (62)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSC
T ss_pred CCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCcC
Confidence 34789 89998778889999955 5689999998753
No 149
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=65.01 E-value=1.7 Score=30.72 Aligned_cols=39 Identities=21% Similarity=0.513 Sum_probs=28.6
Q ss_pred cCCCCccCCCCCC-ceecCCCCcccccccccCCCCCCCCCCCCCCc
Q 048693 312 SECNGCKRPAFGL-MYRCELCNFNLHIPCMFIYRKPTAKHEFFGNF 356 (539)
Q Consensus 312 ~~C~~C~~~~~g~-~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h 356 (539)
..|-+|..++... +|+|..|+.++...|-. .-|..+|..
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~------fiHe~Lh~C 55 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDV------FVHDSLHSC 55 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHH------TTTTTSCSS
T ss_pred CcccccCcccCCCccEECCccCcCcccchhH------HHHhhccCC
Confidence 3599999988443 59999999999999953 235555543
No 150
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=64.34 E-value=5.3 Score=28.76 Aligned_cols=34 Identities=18% Similarity=0.413 Sum_probs=28.1
Q ss_pred cccccccCCCC---CCceeecCCCCcccCccccCCCC
Q 048693 376 NKHCHACGRPA---DGFVYHCEEKGRNLHPCCFNLPR 409 (539)
Q Consensus 376 ~~~C~~C~~~~---~g~~Y~C~~C~f~lH~~C~~lp~ 409 (539)
...|.+|+... .+....|..|+-..|..|...|.
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l 42 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHI 42 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcc
Confidence 47899999863 37789999999999999987653
No 151
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=63.55 E-value=3.3 Score=29.25 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=28.7
Q ss_pred CcccccccCCCCCCceeecCC--CCc-ccCccccCCCCc
Q 048693 375 CNKHCHACGRPADGFVYHCEE--KGR-NLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~C~~lp~~ 410 (539)
...+| .|++...|..-.|.. |.. -.|..|..|+..
T Consensus 8 e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~ 45 (59)
T 3c6w_A 8 EPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTK 45 (59)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSC
T ss_pred CCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCcccC
Confidence 34789 899977788999999 664 799999998764
No 152
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=63.18 E-value=5.9 Score=29.14 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=28.6
Q ss_pred CcccccccCCCCCCceeecCC--CCc-ccCccccCCCCc
Q 048693 375 CNKHCHACGRPADGFVYHCEE--KGR-NLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~C~~lp~~ 410 (539)
...+| .|++...|..-.|.. |.. -+|..|..|+..
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~ 52 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTK 52 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSC
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcC
Confidence 34789 799987788999999 664 699999998653
No 153
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=62.79 E-value=3.5 Score=29.23 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=28.0
Q ss_pred CcccccccCCCCCCceeecCC--CC-cccCccccCCCCc
Q 048693 375 CNKHCHACGRPADGFVYHCEE--KG-RNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~--C~-f~lH~~C~~lp~~ 410 (539)
...+| .|++...|..-.|.. |. --+|..|..|+..
T Consensus 9 e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~ 46 (60)
T 2vnf_A 9 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTK 46 (60)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSC
T ss_pred CCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCcC
Confidence 34789 899977788999999 54 3599999998764
No 154
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=62.61 E-value=11 Score=27.22 Aligned_cols=29 Identities=28% Similarity=0.644 Sum_probs=24.0
Q ss_pred CcCCCCccCCCCCCceecCCCCccccccccc
Q 048693 311 LSECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 311 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
...|..|+.. +....|..|+-.+|..|..
T Consensus 12 ~~~C~vC~~~--~~ll~Cd~C~~~~H~~Cl~ 40 (66)
T 2lri_C 12 GARCGVCGDG--TDVLRCTHCAAAFHWRCHF 40 (66)
T ss_dssp TCCCTTTSCC--TTCEECSSSCCEECHHHHC
T ss_pred CCCcCCCCCC--CeEEECCCCCCceecccCC
Confidence 3469999864 4578999999999999985
No 155
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=62.13 E-value=3.8 Score=30.77 Aligned_cols=36 Identities=28% Similarity=0.517 Sum_probs=31.1
Q ss_pred CcccccccCCC-CCCceeecC--CCCcccCccccCCCCcc
Q 048693 375 CNKHCHACGRP-ADGFVYHCE--EKGRNLHPCCFNLPRKL 411 (539)
Q Consensus 375 ~~~~C~~C~~~-~~g~~Y~C~--~C~f~lH~~C~~lp~~i 411 (539)
...+| .|+.. ..|+.-.|. .|..=.|..|..|+...
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~ 53 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKP 53 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTT
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEcccccc
Confidence 34789 79997 678999999 99999999999998754
No 156
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.90 E-value=8.5 Score=26.67 Aligned_cols=32 Identities=25% Similarity=0.679 Sum_probs=26.6
Q ss_pred CcccccccCCCCCCceeecCCCCcccCccccCCC
Q 048693 375 CNKHCHACGRPADGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
....|.+|++. |....|..|+-..|..|..-|
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~pp 39 (56)
T 2yql_A 8 HEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 39 (56)
T ss_dssp SCCSCSSSCCS--SCCEECSSSSCEECSSSSSSC
T ss_pred CCCCCccCCCC--CeEEEcCCCCcceECccCCCC
Confidence 34789999985 567889999999999998844
No 157
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=61.57 E-value=8.5 Score=27.43 Aligned_cols=35 Identities=23% Similarity=0.553 Sum_probs=28.9
Q ss_pred CCCcCCCCccCCC--CCCceecCCCCcccccccccCC
Q 048693 309 KTLSECNGCKRPA--FGLMYRCELCNFNLHIPCMFIY 343 (539)
Q Consensus 309 ~~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~p 343 (539)
+...+|..|+.+- .+.+-.|..|+--+|..|+.+.
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~ 40 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKIT 40 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCC
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcC
Confidence 4566799999886 4567899999999999999763
No 158
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=61.25 E-value=20 Score=28.57 Aligned_cols=73 Identities=18% Similarity=0.327 Sum_probs=46.9
Q ss_pred cccccccCCCCCCceeecC--CCCcccCccccCCCCcccCCCeeEEEecccccccccccccccccccccCCCCeEEeecC
Q 048693 376 NKHCHACGRPADGFVYHCE--EKGRNLHPCCFNLPRKLPIDSVEFELSDKQLSKKCIWRNSKRLQETVCDRWGWSYVSKC 453 (539)
Q Consensus 376 ~~~C~~C~~~~~g~~Y~C~--~C~f~lH~~C~~lp~~i~~~~h~~~l~~~~~~~~c~~c~~~c~~~~~~~~~~~~y~~~~ 453 (539)
..+|.+|+. .|-...|. .|..-.|..|..|...-. + .=.|.+|. |. .|++. ..|+|..
T Consensus 15 ~~~C~~C~~--~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~--g----------~W~Cp~c~--C~---~C~k~-~~~~C~~ 74 (107)
T 4gne_A 15 EDYCFQCGD--GGELVMCDKKDCPKAYHLLCLNLTQPPY--G----------KWECPWHQ--CD---ECSSA-AVSFCEF 74 (107)
T ss_dssp CSSCTTTCC--CSEEEECCSTTCCCEECTGGGTCSSCCS--S----------CCCCGGGB--CT---TTCSB-CCEECSS
T ss_pred CCCCCcCCC--CCcEeEECCCCCCcccccccCcCCcCCC--C----------CEECCCCC--CC---cCCCC-CCcCcCC
Confidence 478999995 46788999 899999999987533110 0 00243331 11 22222 2378888
Q ss_pred CCeeecccchhhhhH
Q 048693 454 KNYHCHAFCSTEMLL 468 (539)
Q Consensus 454 ~~~~~H~~C~~~~~~ 468 (539)
|...+|..|......
T Consensus 75 Cp~sfC~~c~~g~l~ 89 (107)
T 4gne_A 75 CPHSFCKDHEKGALV 89 (107)
T ss_dssp SSCEECTTTCTTSCE
T ss_pred CCcchhhhccCCcce
Confidence 899999999866643
No 159
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=61.08 E-value=16 Score=36.45 Aligned_cols=69 Identities=17% Similarity=0.109 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHH-HHHHHHHHhCCC---cccccCCcchhhhchHHHHH
Q 048693 178 NMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPK-VQQLLQEFFNGK---RLCKNINPDEAVAYGAAVQA 249 (539)
Q Consensus 178 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~-i~~~l~~~f~~~---~v~~~~~p~~avA~GAal~a 249 (539)
++.....+...|..++... ..+++.|+|.||.+.... +.+.|++.+... .+......+++.++||+..+
T Consensus 274 l~~~~~~la~~i~~l~~~l---~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 274 YRAMAYQIAKWIGKMAAVL---KGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 3334444444444444433 124789999999987544 778888777432 23333333468999998765
No 160
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=60.97 E-value=11 Score=27.35 Aligned_cols=34 Identities=32% Similarity=0.721 Sum_probs=28.1
Q ss_pred CCCCcCCCCccCCCCC-CceecCCCCcccccccccC
Q 048693 308 HKTLSECNGCKRPAFG-LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 308 ~~~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.....+| .|+.+-.+ .+-.|..|+--.|..|+.+
T Consensus 16 ~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi 50 (68)
T 3o70_A 16 FQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKI 50 (68)
T ss_dssp TTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTC
T ss_pred CCCceEe-ECCCcCCCCCEEECCCCCccccccccCc
Confidence 3456779 89988755 5799999999999999976
No 161
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=60.88 E-value=11 Score=38.53 Aligned_cols=44 Identities=20% Similarity=0.278 Sum_probs=27.2
Q ss_pred ceeeeechhHHHHHHh-----cccccc-CCCceEEEEEeCCceeEEEEEE
Q 048693 40 NVLNIISEPTAAAIAC-----GLDRKA-ASEKNVLIFDLGGGTFDVSLLA 83 (539)
Q Consensus 40 ~~~~li~Ep~AAa~~~-----~~~~~~-~~~~~vlvvDiGggTtdisv~~ 83 (539)
..+.+|+..+=+.+++ ++..-. .....+.++|+|||+|+++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 4578887654444433 222211 1235688999999999998764
No 162
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=60.34 E-value=17 Score=25.60 Aligned_cols=31 Identities=29% Similarity=0.718 Sum_probs=25.1
Q ss_pred CCCcCCCCccCCCCCCceecCCCCccccccccc
Q 048693 309 KTLSECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
.....|..|+.. |..-.|..|+-.+|..|..
T Consensus 7 ~~~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ 37 (61)
T 1mm2_A 7 HHMEFCRVCKDG--GELLCCDTCPSSYHIHCLN 37 (61)
T ss_dssp SSCSSCTTTCCC--SSCBCCSSSCCCBCSSSSS
T ss_pred CCCCcCCCCCCC--CCEEEcCCCCHHHcccccC
Confidence 345669999863 5678999999999999985
No 163
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=59.31 E-value=9.2 Score=27.54 Aligned_cols=31 Identities=26% Similarity=0.678 Sum_probs=26.1
Q ss_pred cccccccCCCCCCceeecCCCCcccCccccCCC
Q 048693 376 NKHCHACGRPADGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 376 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
...|.+|++. |....|..|+-..|..|...|
T Consensus 8 ~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~pp 38 (66)
T 1xwh_A 8 EDECAVCRDG--GELICCDGCPRAFHLACLSPP 38 (66)
T ss_dssp CCSBSSSSCC--SSCEECSSCCCEECTTTSSSC
T ss_pred CCCCccCCCC--CCEEEcCCCChhhcccccCCC
Confidence 4789999975 567889999999999998844
No 164
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=59.07 E-value=13 Score=26.62 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=28.3
Q ss_pred CCcCCCCccCCCCCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEec
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFL 361 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~ 361 (539)
....|..|++.+.-..|.| .|+ ..+|+. ..+|--|..++-+.
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg---~~FC~~------HR~~e~H~C~fDyk 55 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKC-KCG---STFCGS------HRYPEKHECSFDFK 55 (64)
T ss_dssp CSCSCTTTCCCCTTSCEEC-TTS---CEECSS------SCSSTTTTCCCCCS
T ss_pred cCCcChhhCCcccccCeEe-ecC---CEeccc------CCCccccCCCcchh
Confidence 3467999999875556999 798 456753 44555566665543
No 165
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=58.74 E-value=12 Score=25.30 Aligned_cols=29 Identities=24% Similarity=0.699 Sum_probs=24.5
Q ss_pred CCCCccCCC-CCCceecCCCCccccccccc
Q 048693 313 ECNGCKRPA-FGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 313 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
.|..|+... .+..-.|..|+-.+|..|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~ 31 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLR 31 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCC
Confidence 488898876 45678999999999999985
No 166
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.38 E-value=6.2 Score=29.65 Aligned_cols=35 Identities=20% Similarity=0.521 Sum_probs=29.4
Q ss_pred CcccccccCCCC--CCceeecCCCCcccCccccCCCCc
Q 048693 375 CNKHCHACGRPA--DGFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
...+| .|+++. .++.-.|..|+-=.|..|+.|+..
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~ 47 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEE 47 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHH
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccc
Confidence 45788 899975 678899999998899999998754
No 167
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=56.88 E-value=30 Score=34.24 Aligned_cols=49 Identities=18% Similarity=0.236 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCCh-HHHHHHHHHHhC-------CCcccccCCcchhhhchHHHHHH
Q 048693 202 SVDDVVIVGGSARI-PKVQQLLQEFFN-------GKRLCKNINPDEAVAYGAAVQAA 250 (539)
Q Consensus 202 ~i~~ViLvGG~s~~-p~i~~~l~~~f~-------~~~v~~~~~p~~avA~GAal~a~ 250 (539)
+++.|+|.||.+.. +.+.+.+++.+. ..++....-.+.+.++||+..+.
T Consensus 314 dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 314 GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 35789999998764 666666666542 12333344456789999998764
No 168
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=56.25 E-value=5 Score=29.87 Aligned_cols=35 Identities=20% Similarity=0.544 Sum_probs=29.1
Q ss_pred CcccccccCCCCC-CceeecCCCCcccCccccCCCCc
Q 048693 375 CNKHCHACGRPAD-GFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~-g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
...+| .|++... ++...|..|+-=.|..|+.|+..
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~ 50 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEA 50 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHH
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchh
Confidence 34789 8999765 58899999998899999998754
No 169
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=55.60 E-value=26 Score=33.43 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=41.5
Q ss_pred CCCCCcEEEEeCCCCCH----------------H-HHHHHHHHHHHcCCceeeeechhHHHHHHhccccccCCCceEEEE
Q 048693 8 GSPVSNAVVTVPAYFTN----------------S-QRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKAASEKNVLIF 70 (539)
Q Consensus 8 g~~v~~vvitVP~~~~~----------------~-~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvv 70 (539)
..++..+.|++|...+. . -++.+.+ ..|++ +.+.++..|+|++-.+.-.......++++
T Consensus 55 ~~~i~gigi~~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~---~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l 130 (302)
T 3vov_A 55 GVRGEAIGLGTPGPLDFRRGVIRFAPNIPGVQDFPIRRILEE---ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYL 130 (302)
T ss_dssp TCCCSSEEEEESSCEETTTTEEC---CCTTCTTCCHHHHHHH---HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred cCCceEEEEEecccEeCCCCEEEcCCCCCCcCCCChHHHHHH---hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEE
Confidence 45677777777754321 1 1233333 34664 68999999999886433222235677888
Q ss_pred EeCCceeEEEEE
Q 048693 71 DLGGGTFDVSLL 82 (539)
Q Consensus 71 DiGggTtdisv~ 82 (539)
-+|.| .-.+++
T Consensus 131 ~~GtG-iG~gii 141 (302)
T 3vov_A 131 TVSTG-IGGGVV 141 (302)
T ss_dssp EESSS-EEEEEE
T ss_pred EECCc-eeEEEE
Confidence 88877 334444
No 170
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=55.59 E-value=9.4 Score=27.03 Aligned_cols=31 Identities=26% Similarity=0.623 Sum_probs=25.9
Q ss_pred cccccccCCCCCCceeecCCCCcccCccccCCC
Q 048693 376 NKHCHACGRPADGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 376 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
..+|.+|++. |....|..|+-..|..|...|
T Consensus 9 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~pp 39 (61)
T 1mm2_A 9 MEFCRVCKDG--GELLCCDTCPSSYHIHCLNPP 39 (61)
T ss_dssp CSSCTTTCCC--SSCBCCSSSCCCBCSSSSSSC
T ss_pred CCcCCCCCCC--CCEEEcCCCCHHHcccccCCC
Confidence 4789999874 567889999999999998854
No 171
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=55.28 E-value=8.9 Score=26.99 Aligned_cols=31 Identities=26% Similarity=0.715 Sum_probs=26.1
Q ss_pred cccccccCCCCCCceeecCCCCcccCccccCCC
Q 048693 376 NKHCHACGRPADGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 376 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
...|.+|++. |..-.|..|+-..|..|..-|
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~pp 35 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 35 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECGGGSSSC
T ss_pred CCCCcCCCCC--CcEEEcCCCCcCEECCcCCCC
Confidence 3679999985 567889999999999998844
No 172
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=55.18 E-value=33 Score=32.91 Aligned_cols=51 Identities=24% Similarity=0.285 Sum_probs=35.0
Q ss_pred CCCeEEEEcCCCCh-----HHHHHHHHHHhC------CCcccccCCcchhhhchHHHHHHHH
Q 048693 202 SVDDVVIVGGSARI-----PKVQQLLQEFFN------GKRLCKNINPDEAVAYGAAVQAAVL 252 (539)
Q Consensus 202 ~i~~ViLvGG~s~~-----p~i~~~l~~~f~------~~~v~~~~~p~~avA~GAal~a~~~ 252 (539)
+++.|+|-||.+.. +.+++.+++.+. ..++..+.-.+.+.++|||.++...
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~ 300 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQR 300 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHH
Confidence 35789999988765 467777777652 1234444456788999999888544
No 173
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=54.88 E-value=6.5 Score=28.45 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=24.9
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
..|.+|++. +-...|..|+...|..|..-|
T Consensus 13 ~~C~vC~~~--~~ll~Cd~C~~~~H~~Cl~P~ 42 (66)
T 2lri_C 13 ARCGVCGDG--TDVLRCTHCAAAFHWRCHFPA 42 (66)
T ss_dssp CCCTTTSCC--TTCEECSSSCCEECHHHHCTT
T ss_pred CCcCCCCCC--CeEEECCCCCCceecccCCCc
Confidence 679999975 447889999999999997644
No 174
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=54.59 E-value=4.8 Score=28.61 Aligned_cols=32 Identities=22% Similarity=0.556 Sum_probs=27.3
Q ss_pred cccccccCCCCCCceeecCCCCcccCccccCCCC
Q 048693 376 NKHCHACGRPADGFVYHCEEKGRNLHPCCFNLPR 409 (539)
Q Consensus 376 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp~ 409 (539)
..+|.+|++. |....|..|+...|..|...|.
T Consensus 11 ~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~l 42 (61)
T 2l5u_A 11 QDYCEVCQQG--GEIILCDTCPRAYHMVCLDPDM 42 (61)
T ss_dssp CSSCTTTSCC--SSEEECSSSSCEEEHHHHCTTC
T ss_pred CCCCccCCCC--CcEEECCCCChhhhhhccCCCC
Confidence 4789999984 6788899999999999998763
No 175
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=54.09 E-value=16 Score=26.07 Aligned_cols=42 Identities=19% Similarity=0.341 Sum_probs=28.1
Q ss_pred CCcCCCCccCCCCCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEec
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFL 361 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~ 361 (539)
....|..|++.+.-..|+| .|+ ..+|+. ..+|--|+.++-+.
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg---~~FC~~------HRy~e~H~C~fDyk 55 (64)
T 1wfh_A 14 RPNRCTVCRKRVGLTGFMC-RCG---TTFCGS------HRYPEVHGCTFDFK 55 (64)
T ss_dssp SCCCCTTTCCCCCTTCEEC-SSS---CEECTT------TCSTTTTTCCCCCS
T ss_pred cCCcChhhCCccCccCEEe-ecC---CEeccc------cCCcccCCCCchhh
Confidence 4567999999875556999 598 456653 44555566665543
No 176
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=54.08 E-value=17 Score=26.72 Aligned_cols=43 Identities=14% Similarity=0.371 Sum_probs=29.2
Q ss_pred CCcCCCCccCCCCCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEecc
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLP 362 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~ 362 (539)
....|..|+..+.-..|.|. |+ ..+|+. .++|--|..+|-+..
T Consensus 24 ~~nRC~~CrKkvgL~gf~Cr-Cg---~~FCs~------HRy~e~H~C~fDyk~ 66 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCR-CG---NLFCGL------HRYSDKHNCPYDYKA 66 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECT-TS---CEECSS------SCSTTTTTCCCCGGG
T ss_pred cCCcChhhCCcccccCeecC-CC---CEechh------cCCCccCCCcchhhh
Confidence 45579999998654569999 98 566764 345545666665543
No 177
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=53.23 E-value=8.9 Score=29.47 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=26.6
Q ss_pred ccccccCCCC---CCceeecCCCCcccCccccCCC
Q 048693 377 KHCHACGRPA---DGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 377 ~~C~~C~~~~---~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
..|.+|++.. .+....|..|+...|..|..-|
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ 51 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc
Confidence 6899999864 3678889999999999997644
No 178
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=52.19 E-value=11 Score=29.27 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=28.5
Q ss_pred CcccccccCCCCCCceeecCC--CCc-ccCccccCCCCc
Q 048693 375 CNKHCHACGRPADGFVYHCEE--KGR-NLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~C~~lp~~ 410 (539)
...+| .|++...|..-.|.. |.+ -+|..|..|+..
T Consensus 35 e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~ 72 (91)
T 1weu_A 35 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTK 72 (91)
T ss_dssp CCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSC
T ss_pred CCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCcC
Confidence 34789 999987788899999 654 599999998763
No 179
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.06 E-value=7.4 Score=28.87 Aligned_cols=33 Identities=27% Similarity=0.691 Sum_probs=27.2
Q ss_pred CCCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+....|..|.+.+. ...+|..|+-.+|..|...
T Consensus 13 ~~i~~C~IC~~~i~-~g~~C~~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 13 DAVKICNICHSLLI-QGQSCETCGIRMHLPCVAK 45 (74)
T ss_dssp SSSCBCSSSCCBCS-SSEECSSSCCEECHHHHHH
T ss_pred CCCCcCcchhhHcc-cCCccCCCCchhhHHHHHH
Confidence 45667999999885 3479999999999999854
No 180
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=51.45 E-value=12 Score=29.39 Aligned_cols=32 Identities=28% Similarity=0.707 Sum_probs=27.0
Q ss_pred ccccccCCCC-CCceeecCCCCcccCccccCCCC
Q 048693 377 KHCHACGRPA-DGFVYHCEEKGRNLHPCCFNLPR 409 (539)
Q Consensus 377 ~~C~~C~~~~-~g~~Y~C~~C~f~lH~~C~~lp~ 409 (539)
..| .|+... .|....|..|+--.|..|..+|.
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~ 61 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDR 61 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCT
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCc
Confidence 568 798864 67889999999999999998764
No 181
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=51.20 E-value=11 Score=28.48 Aligned_cols=33 Identities=18% Similarity=0.453 Sum_probs=28.7
Q ss_pred CCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.+..|..|.---.+..|.|..|.=..|..|...
T Consensus 14 ~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r 46 (89)
T 1wil_A 14 NDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRR 46 (89)
T ss_dssp CSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHH
T ss_pred CCcccCccccccccceeccccccccccHhhccc
Confidence 456799999877888899999999999999865
No 182
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=50.71 E-value=6.7 Score=37.46 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=38.6
Q ss_pred CCCCcEEEEeCCCCCHHHHHHHHHHHHH-cCC-ceeeeechhHHHHHHhccccccCCCceEEEEEeCCcee
Q 048693 9 SPVSNAVVTVPAYFTNSQRQATKDAGAM-AGL-NVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTF 77 (539)
Q Consensus 9 ~~v~~vvitVP~~~~~~~r~~l~~aa~~-AGl-~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTt 77 (539)
.++..+.|++|..- ......+++..+. .++ .++.+.++..||+++-. . ....+++=+|-|.-
T Consensus 58 ~~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g---~~~~v~v~~GTGig 121 (291)
T 1zbs_A 58 SSIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---G---DSEGIACILGTGSN 121 (291)
T ss_dssp TTCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---T---TSCEEEEEESSSEE
T ss_pred ccccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---C---CCCcEEEEecCChh
Confidence 35778999999875 2222345444443 454 47899999999998752 1 23344444676653
No 183
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=50.27 E-value=8.2 Score=37.07 Aligned_cols=57 Identities=11% Similarity=0.144 Sum_probs=35.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcC-CceeeeechhHHHHHHhccccccCCCceEEEEEeCCcee
Q 048693 12 SNAVVTVPAYFTNSQRQATKDAGAMAG-LNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTF 77 (539)
Q Consensus 12 ~~vvitVP~~~~~~~r~~l~~aa~~AG-l~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTt 77 (539)
..+.|++|..-+......+.+ ... -.++.+.++..||+++.. . ....+++-+|.|..
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~pv~v~NDa~aaa~ge~---~---~~~~v~v~~GTGig 134 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFARLSLATDGYTTLLGAH---G---GQPGIIVALGTGSI 134 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCSEEEEECHHHHHHHHHT---T---TSSEEEEEESSSEE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCceEEEECCHHHHHHhhc---C---CCCeEEEEecCCeE
Confidence 468999999876554333322 121 135788999999988752 1 23456677787763
No 184
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=49.28 E-value=10 Score=30.27 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=28.7
Q ss_pred ccccccCCC--CCCceeecC-CCCcccCccccCCCC
Q 048693 377 KHCHACGRP--ADGFVYHCE-EKGRNLHPCCFNLPR 409 (539)
Q Consensus 377 ~~C~~C~~~--~~g~~Y~C~-~C~f~lH~~C~~lp~ 409 (539)
..|..|+++ ..+....|. .|+-=+|..|..|+.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~ 39 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTE 39 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCH
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCH
Confidence 679999997 467788998 999889999999875
No 185
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=49.19 E-value=12 Score=27.38 Aligned_cols=35 Identities=26% Similarity=0.608 Sum_probs=28.7
Q ss_pred CcccccccCCCC-CC-ceeecCCCCcccCccccCCCCc
Q 048693 375 CNKHCHACGRPA-DG-FVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~-~g-~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
...+| .|++.. .| +.-.|..|+-=.|..|+.++..
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~ 51 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNA 51 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTT
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcc
Confidence 45789 699874 45 7889999998899999998763
No 186
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=49.09 E-value=43 Score=33.37 Aligned_cols=50 Identities=8% Similarity=0.093 Sum_probs=32.6
Q ss_pred CCeEEEEcCCCC-hHHHHHHHHHHhC---------CCcccccCCcchhhhchHHHHHHHH
Q 048693 203 VDDVVIVGGSAR-IPKVQQLLQEFFN---------GKRLCKNINPDEAVAYGAAVQAAVL 252 (539)
Q Consensus 203 i~~ViLvGG~s~-~p~i~~~l~~~f~---------~~~v~~~~~p~~avA~GAal~a~~~ 252 (539)
++.|+|.||.+. .+.+.+.+++.+. ..++....-.+++.++||++....+
T Consensus 335 P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~~ 394 (406)
T 1z6r_A 335 PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDAM 394 (406)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHHT
T ss_pred CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHHH
Confidence 568999998876 3666666655441 2344445456778999998765443
No 187
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.07 E-value=20 Score=24.73 Aligned_cols=31 Identities=23% Similarity=0.658 Sum_probs=25.6
Q ss_pred CCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
....|..|+.. +..-.|..|+-.+|..|...
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~p 38 (56)
T 2yql_A 8 HEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDP 38 (56)
T ss_dssp SCCSCSSSCCS--SCCEECSSSSCEECSSSSSS
T ss_pred CCCCCccCCCC--CeEEEcCCCCcceECccCCC
Confidence 45669999985 56789999999999999863
No 188
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=48.98 E-value=7.1 Score=29.81 Aligned_cols=30 Identities=27% Similarity=0.722 Sum_probs=23.8
Q ss_pred cccccccCCCC----CC-ceeecCCCCcccCcccc
Q 048693 376 NKHCHACGRPA----DG-FVYHCEEKGRNLHPCCF 405 (539)
Q Consensus 376 ~~~C~~C~~~~----~g-~~Y~C~~C~f~lH~~C~ 405 (539)
.-.|.+||+.+ +| .+--|..|+|.+..-|-
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCy 50 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCY 50 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHH
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHH
Confidence 36899999864 44 56789999999988774
No 189
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.81 E-value=8.3 Score=28.26 Aligned_cols=34 Identities=21% Similarity=0.507 Sum_probs=28.1
Q ss_pred CcccccccCCCCCCceeecCCCC---cccCccccCCCC
Q 048693 375 CNKHCHACGRPADGFVYHCEEKG---RNLHPCCFNLPR 409 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~C~~lp~ 409 (539)
...+|- |++...|+.-.|..|+ --+|..|..|+.
T Consensus 5 ~~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~ 41 (70)
T 1x4i_A 5 SSGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLTE 41 (70)
T ss_dssp CCCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCSS
T ss_pred CCeEEE-cCCCCCCCEeEeCCCCCCccCCcccccccCc
Confidence 447885 9988888999999986 468999999876
No 190
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=48.62 E-value=14 Score=27.91 Aligned_cols=28 Identities=32% Similarity=0.726 Sum_probs=19.2
Q ss_pred cCCCCccCCC--CCCceecCCCC--ccccccc
Q 048693 312 SECNGCKRPA--FGLMYRCELCN--FNLHIPC 339 (539)
Q Consensus 312 ~~C~~C~~~~--~g~~Y~C~~C~--f~lH~~C 339 (539)
..|-.|..++ .+..|+|..|+ |.....|
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~~~~afC 34 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDFSLQALC 34 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEEEEEEEC
T ss_pred CCCCCCCCccccCCCceECccccccCCCcccC
Confidence 4688888776 44567899994 5555555
No 191
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=48.59 E-value=16 Score=26.90 Aligned_cols=42 Identities=19% Similarity=0.375 Sum_probs=28.1
Q ss_pred CCcCCCCccCCCCCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEec
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFL 361 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~ 361 (539)
....|..|++.+.-..|.| .|+ ..+|+. ..+|--|..++.+.
T Consensus 24 ~~~RC~~C~kkvgL~~f~C-rCg---~~FCs~------HRy~e~H~C~fDyk 65 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKC-RCG---STFCGT------HRYPESHECQFDFK 65 (74)
T ss_dssp CCCBCSSSCCBCTTTCEEC-TTS---CEECTT------TCSTTTSCCCSCTT
T ss_pred cCccchhhcCcccccceEe-ccC---CEeccc------cCCCcCCCCcCchh
Confidence 4567999999876567999 698 455653 34555555655543
No 192
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=46.56 E-value=19 Score=25.70 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=27.3
Q ss_pred CCCcCCCCccCCC---CCCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPA---FGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.....|..|+..- .+..-.|..|+-.+|..|...
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p 40 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTP 40 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSS
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCC
Confidence 3456799999863 367799999999999999853
No 193
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=45.97 E-value=18 Score=27.75 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=27.0
Q ss_pred CCcCCCCccCCCC---CCceecCCCCcccccccccC
Q 048693 310 TLSECNGCKRPAF---GLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 310 ~~~~C~~C~~~~~---g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
....|..|+.... +..-.|..|+-.+|..|...
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~P 50 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKP 50 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSS
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCC
Confidence 3567999998753 66799999999999999753
No 194
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=45.91 E-value=73 Score=30.76 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=28.8
Q ss_pred cCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEE
Q 048693 37 AGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLL 82 (539)
Q Consensus 37 AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~ 82 (539)
.|++ +.+.++..|+|++-.+.-.......++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3665 6889999999988643222223466788888887 344444
No 195
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=45.64 E-value=18 Score=27.92 Aligned_cols=34 Identities=21% Similarity=0.441 Sum_probs=27.1
Q ss_pred CCCCcCCCCccCCCCCCceecCCCC---cccccccccC
Q 048693 308 HKTLSECNGCKRPAFGLMYRCELCN---FNLHIPCMFI 342 (539)
Q Consensus 308 ~~~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~ 342 (539)
.+...+| .|..+-.|.+-.|+.|+ --+|..|..+
T Consensus 23 ~~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl 59 (90)
T 2jmi_A 23 NQEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGL 59 (90)
T ss_dssp -CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSC
T ss_pred CCCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCC
Confidence 3456778 89988778888999976 6799999976
No 196
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=45.06 E-value=33 Score=32.76 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=28.6
Q ss_pred cCCceeeeechhHHHHHHhccccccCCCceEEEEEeCCceeEEEEE
Q 048693 37 AGLNVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGTFDVSLL 82 (539)
Q Consensus 37 AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggTtdisv~ 82 (539)
.|++ +.+.++..|+|++-.+.-..+..+.++++-+|.|- -.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGi-G~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGI-GAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCce-EEEEE
Confidence 3775 78999999999986433222235667888888663 33444
No 197
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=44.98 E-value=18 Score=26.49 Aligned_cols=33 Identities=27% Similarity=0.544 Sum_probs=26.8
Q ss_pred CCCcCCCCccCCC-CC-CceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPA-FG-LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~-~g-~~Y~C~~C~f~lH~~Ca~~ 342 (539)
....+| .|+.+- .| .+-.|..|+--.|..|+.+
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~ 48 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGI 48 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTC
T ss_pred CcceEe-eCCCccCCCCcEEECCCCCCccCCeeecc
Confidence 456679 599885 45 5789999999999999976
No 198
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=44.96 E-value=8.3 Score=26.04 Aligned_cols=31 Identities=23% Similarity=0.657 Sum_probs=25.3
Q ss_pred cccccCCCC-CCceeecCCCCcccCccccCCC
Q 048693 378 HCHACGRPA-DGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 378 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
.|.+|++.. .+..-.|..|+--.|..|...|
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~ 33 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPA 33 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTT
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCC
Confidence 489998764 4667899999999999998643
No 199
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=44.52 E-value=36 Score=27.36 Aligned_cols=25 Identities=20% Similarity=0.444 Sum_probs=17.4
Q ss_pred cCCCCccCCC--C------CCceecCCCCcccc
Q 048693 312 SECNGCKRPA--F------GLMYRCELCNFNLH 336 (539)
Q Consensus 312 ~~C~~C~~~~--~------g~~Y~C~~C~f~lH 336 (539)
.+|.-|+..+ . ..+|.|..|+|...
T Consensus 5 ~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~~ 37 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKVDRVLRLACRNCDYSEI 37 (113)
T ss_dssp CCCSSSCCCCEECCCTTTCCCCEECSSSCCEEC
T ss_pred eeCcCCCCEeeEcccCCCCeeEEECCCCCCeEE
Confidence 4578887764 1 13699999998654
No 200
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.07 E-value=35 Score=25.38 Aligned_cols=29 Identities=28% Similarity=0.661 Sum_probs=24.3
Q ss_pred CCCCccCCC-CCCceecCCCCccccccccc
Q 048693 313 ECNGCKRPA-FGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 313 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
.|..|+... .+..-.|..|+-.+|..|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~ 57 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLN 57 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSS
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccC
Confidence 678888765 55678999999999999985
No 201
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=43.93 E-value=7.9 Score=31.97 Aligned_cols=34 Identities=15% Similarity=0.319 Sum_probs=26.6
Q ss_pred CCCcCCCCccCCCC--CCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPAF--GLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~--g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.....|..|..+.. .-+++|..|+-.+...|...
T Consensus 67 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 67 NEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 34557999998753 34599999999999999753
No 202
>3nis_A E3 ubiquitin-protein ligase UBR1; E3 ubiquitin ligase, UBR BOX, zinc-binding protein, N-END RU ligase, metal binding protein; 1.68A {Saccharomyces cerevisiae} PDB: 3nii_A 3nij_A 3nih_A 3nik_A 3nim_A 3nin_A 3nil_A 3nit_A
Probab=43.82 E-value=29 Score=26.24 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=27.4
Q ss_pred ccCCC--CCCceeecCCCCcc-cCccccCCCCcccCCCeeEEEecc
Q 048693 381 ACGRP--ADGFVYHCEEKGRN-LHPCCFNLPRKLPIDSVEFELSDK 423 (539)
Q Consensus 381 ~C~~~--~~g~~Y~C~~C~f~-lH~~C~~lp~~i~~~~h~~~l~~~ 423 (539)
+|++. .....|+|..|.++ .+.-|..--..=.|.+|...++..
T Consensus 10 ~Cg~vf~~ge~~Y~C~~C~~d~tcvlC~~CF~~s~H~gH~~~~~~s 55 (82)
T 3nis_A 10 NCGRKFKIGEPLYRCHECGCDDTCVLCIHCFNPKDHVNHHVCTDIC 55 (82)
T ss_dssp CCCCBCCTTCEEEEETTTBSSTTCCBCTTTCCGGGGTTSCEEEEEC
T ss_pred CCCCcccCCCEEEEeeccCCCCCceEchhhCCCCCcCCceEEEEEe
Confidence 45553 35678999999864 334454444555577888777543
No 203
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=43.73 E-value=9.8 Score=33.70 Aligned_cols=33 Identities=24% Similarity=0.531 Sum_probs=26.9
Q ss_pred ccccccCCCC-----CCceeecCCCCcccCccccCCCC
Q 048693 377 KHCHACGRPA-----DGFVYHCEEKGRNLHPCCFNLPR 409 (539)
Q Consensus 377 ~~C~~C~~~~-----~g~~Y~C~~C~f~lH~~C~~lp~ 409 (539)
.+|.+|++.. .++.-.|..|+.=+|..|.++..
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~ 40 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSD 40 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCH
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCH
Confidence 5799999853 23478999999999999998754
No 204
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=43.64 E-value=66 Score=33.10 Aligned_cols=24 Identities=29% Similarity=0.534 Sum_probs=21.0
Q ss_pred CceEEEEEeCCceeEEEEEEEecC
Q 048693 64 EKNVLIFDLGGGTFDVSLLAIEKG 87 (539)
Q Consensus 64 ~~~vlvvDiGggTtdisv~~~~~~ 87 (539)
...++.+|+||.++-+.++++.+.
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESS
T ss_pred ceEEEEEEecCCeEEEEEEEECCC
Confidence 357899999999999999999764
No 205
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=43.49 E-value=27 Score=25.02 Aligned_cols=30 Identities=27% Similarity=0.724 Sum_probs=25.1
Q ss_pred CCcCCCCccCCCCCCceecCCCCccccccccc
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
....|..|+.. |..-.|..|+-.+|..|..
T Consensus 7 ~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~ 36 (66)
T 1xwh_A 7 NEDECAVCRDG--GELICCDGCPRAFHLACLS 36 (66)
T ss_dssp CCCSBSSSSCC--SSCEECSSCCCEECTTTSS
T ss_pred CCCCCccCCCC--CCEEEcCCCChhhcccccC
Confidence 45679999875 5679999999999999985
No 206
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=43.42 E-value=23 Score=31.95 Aligned_cols=30 Identities=23% Similarity=0.555 Sum_probs=24.1
Q ss_pred CCcCCCCccCCCCCCceecCCCCccccccccc
Q 048693 310 TLSECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 310 ~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
....|..|+..+ ..-.|..|+-..|..|..
T Consensus 6 ~~~~C~~C~~~g--~ll~Cd~C~~~~H~~Cl~ 35 (207)
T 3u5n_A 6 NEDWCAVCQNGG--DLLCCEKCPKVFHLTCHV 35 (207)
T ss_dssp SCSSBTTTCCCE--EEEECSSSSCEECTTTSS
T ss_pred CCCCCCCCCCCC--ceEEcCCCCCccCCccCC
Confidence 345699998654 478899999999999975
No 207
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=42.97 E-value=12 Score=31.58 Aligned_cols=20 Identities=20% Similarity=0.464 Sum_probs=13.6
Q ss_pred ccccCCCCCCceeecCCCCc
Q 048693 379 CHACGRPADGFVYHCEEKGR 398 (539)
Q Consensus 379 C~~C~~~~~g~~Y~C~~C~f 398 (539)
|..|+.....-+|||..|+.
T Consensus 104 CgiCR~G~~~~ffHC~~C~~ 123 (143)
T 2dkt_A 104 CGICRIGPKEDFFHCLKCNL 123 (143)
T ss_dssp TTEEEESCGGGEEEETTTTE
T ss_pred CCceeccCCcCcEECCcCCe
Confidence 55554454556899999985
No 208
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=42.60 E-value=8.6 Score=29.57 Aligned_cols=34 Identities=18% Similarity=0.558 Sum_probs=27.9
Q ss_pred cccccccCCCC---CCceeecCCCCcccCccccCCCC
Q 048693 376 NKHCHACGRPA---DGFVYHCEEKGRNLHPCCFNLPR 409 (539)
Q Consensus 376 ~~~C~~C~~~~---~g~~Y~C~~C~f~lH~~C~~lp~ 409 (539)
...|.+|+... .+....|..|+.-+|..|..+|.
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~ 61 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY 61 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc
Confidence 37899999753 34678999999999999998773
No 209
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=42.47 E-value=15 Score=24.96 Aligned_cols=33 Identities=21% Similarity=0.493 Sum_probs=26.9
Q ss_pred ccccccCCCCC-CceeecCCCCcccCccccCCCCc
Q 048693 377 KHCHACGRPAD-GFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 377 ~~C~~C~~~~~-g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
.+| .|+++.. ++.-.|..|+-=.|..|+.++..
T Consensus 5 ~~C-~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~ 38 (52)
T 3o7a_A 5 VTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKS 38 (52)
T ss_dssp BCS-TTCCBCTTCCEEECTTTCCEEETTTTTCCGG
T ss_pred eEE-EeCCcCCCCCEEEcCCCCccccccccCCCcc
Confidence 456 5887654 48899999999999999998874
No 210
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=42.20 E-value=9.5 Score=28.50 Aligned_cols=11 Identities=36% Similarity=0.830 Sum_probs=8.7
Q ss_pred cccccccCCCC
Q 048693 376 NKHCHACGRPA 386 (539)
Q Consensus 376 ~~~C~~C~~~~ 386 (539)
.|+|+.||+.+
T Consensus 10 ~F~C~~Cgd~l 20 (79)
T 1wjv_A 10 FFTCNACGESV 20 (79)
T ss_dssp EEEESSSCCEE
T ss_pred EEEcCCCCCee
Confidence 48999999743
No 211
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.18 E-value=28 Score=24.91 Aligned_cols=13 Identities=38% Similarity=0.889 Sum_probs=9.5
Q ss_pred CcCCCCccCCCCC
Q 048693 311 LSECNGCKRPAFG 323 (539)
Q Consensus 311 ~~~C~~C~~~~~g 323 (539)
...|.+|.++|.+
T Consensus 5 ~~~C~~C~~~I~~ 17 (72)
T 1x61_A 5 SSGCGGCGEDVVG 17 (72)
T ss_dssp CCCCSSSCSCCCS
T ss_pred CCCCccCCCccCC
Confidence 3568888888864
No 212
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=41.50 E-value=20 Score=27.07 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=26.3
Q ss_pred CcccccccCCCCCCc--eeecCCCCcccCccccCC
Q 048693 375 CNKHCHACGRPADGF--VYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~--~Y~C~~C~f~lH~~C~~l 407 (539)
....|..|+....-+ .+||..|+..+.-.|...
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred CCCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 347899999976433 599999999999999754
No 213
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=40.75 E-value=97 Score=31.10 Aligned_cols=69 Identities=19% Similarity=0.257 Sum_probs=50.4
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHH-HHHHhcccccc------CCC--------------ceEEE
Q 048693 11 VSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTA-AAIACGLDRKA------ASE--------------KNVLI 69 (539)
Q Consensus 11 v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~A-Aa~~~~~~~~~------~~~--------------~~vlv 69 (539)
+.++|+..|..-+ -.+.-||..+|++.++-+--..| ||++||...-. .++ ...+=
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~Vg 229 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAA 229 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCE
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccc
Confidence 5689999998333 34788999999999999999888 67888854322 111 11234
Q ss_pred EEeCCceeEEEEEE
Q 048693 70 FDLGGGTFDVSLLA 83 (539)
Q Consensus 70 vDiGggTtdisv~~ 83 (539)
+|+=+|-+++-|+-
T Consensus 230 IDm~AGPSEilViA 243 (434)
T 1kae_A 230 IDMPAGPSEVLVIA 243 (434)
T ss_dssp ESCCCCCCEEEEEE
T ss_pred cCCCCCCceEEEEe
Confidence 88888988888876
No 214
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=40.10 E-value=36 Score=33.52 Aligned_cols=18 Identities=11% Similarity=0.052 Sum_probs=15.0
Q ss_pred cCCceeeeechhHHHHHH
Q 048693 37 AGLNVLNIISEPTAAAIA 54 (539)
Q Consensus 37 AGl~~~~li~Ep~AAa~~ 54 (539)
.++..+.+.++..|+|++
T Consensus 127 ~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 127 FPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp SCTTSEEEEEHHHHHHHH
T ss_pred cCCCCEEEEccHhHHhcc
Confidence 355568999999999998
No 215
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=39.74 E-value=7.2 Score=34.15 Aligned_cols=35 Identities=20% Similarity=0.491 Sum_probs=29.1
Q ss_pred CcccccccCCCC--CCceeecCCCCcccCccccCCCCc
Q 048693 375 CNKHCHACGRPA--DGFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 375 ~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
...+| .|+++. .++.-.|..|.--.|..|..++..
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~ 43 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQS 43 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchh
Confidence 34889 999864 577899999999999999988653
No 216
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=39.72 E-value=15 Score=30.69 Aligned_cols=42 Identities=10% Similarity=0.293 Sum_probs=18.8
Q ss_pred CCCceeEeccCCCCCCCCcCcCCcccccccCCCC--------CCceeecCCCCccc
Q 048693 353 FGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPA--------DGFVYHCEEKGRNL 400 (539)
Q Consensus 353 ~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~--------~g~~Y~C~~C~f~l 400 (539)
||.|.--|++...... ...+|.-|+.-. ....|.|..|+|..
T Consensus 7 ~~~~~~~~~~~~~~~~------~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~~ 56 (133)
T 3qt1_I 7 HHHHSSGLVPRGSHMT------TFRFCRDCNNMLYPREDKENNRLLFECRTCSYVE 56 (133)
T ss_dssp ---------------C------CCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCBC
T ss_pred ccccccccccCCcccc------CCeeCCCCCCEeeECccCCCceeEEECCCCCCcE
Confidence 4456666666544322 237899998521 24579999999854
No 217
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=38.95 E-value=32 Score=25.13 Aligned_cols=33 Identities=24% Similarity=0.704 Sum_probs=26.7
Q ss_pred CCCcCCCCccCCCCCCceecCC--CCc-ccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCEL--CNF-NLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~~ 342 (539)
....+| .|+.+-.|.+-.|.. |.. -+|..|..+
T Consensus 14 ~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl 49 (71)
T 1wen_A 14 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGL 49 (71)
T ss_dssp TSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTC
T ss_pred CCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCc
Confidence 456678 699987788899999 764 899999875
No 218
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.95 E-value=22 Score=25.91 Aligned_cols=33 Identities=21% Similarity=0.494 Sum_probs=26.7
Q ss_pred CCCcCCCCccCCCCCCceecCCCC---cccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCELCN---FNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~ 342 (539)
..+.+|. |..+-.|.+-.|+.|| --+|..|..+
T Consensus 4 ~~~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl 39 (70)
T 1x4i_A 4 GSSGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGL 39 (70)
T ss_dssp SCCCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTC
T ss_pred CCCeEEE-cCCCCCCCEeEeCCCCCCccCCccccccc
Confidence 4566786 8888788889999986 6799999976
No 219
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=38.44 E-value=11 Score=34.92 Aligned_cols=33 Identities=27% Similarity=0.697 Sum_probs=27.7
Q ss_pred CCCcCCCCccCCCCCCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+....|..|.+.+.- ..+|..|+..+|..|...
T Consensus 178 ~~i~~C~iC~~iv~~-g~~C~~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 178 DAVKICNICHSLLIQ-GQSCETCGIRMHLPCVAK 210 (238)
T ss_dssp TTCCBCTTTCSBCSS-CEECSSSCCEECHHHHHH
T ss_pred CCCCcCcchhhHHhC-CcccCccChHHHHHHHHH
Confidence 357779999999863 499999999999999854
No 220
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=37.90 E-value=9.6 Score=29.60 Aligned_cols=44 Identities=18% Similarity=0.381 Sum_probs=19.8
Q ss_pred CCCceeEeccCCCCCCCCcCcCCcccccccCCCC--CCceeecCCCC--cccCccc
Q 048693 353 FGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPA--DGFVYHCEEKG--RNLHPCC 404 (539)
Q Consensus 353 ~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~--~g~~Y~C~~C~--f~lH~~C 404 (539)
||.|.--|+++.... ...|-.|+... .|-.|+|..|+ |...+.|
T Consensus 17 ~~~~~~~~~~~~~~M--------~~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~C 64 (101)
T 2jne_A 17 HHHHSSGLVPRGSHM--------ELHCPQCQHVLDQDNGHARCRSCGEFIEMKALC 64 (101)
T ss_dssp --------------C--------CCBCSSSCSBEEEETTEEEETTTCCEEEEEEEC
T ss_pred ccccccccccCcccc--------cccCccCCCcceecCCEEECccccchhhccccC
Confidence 445666676664421 16899998754 44478899998 5444333
No 221
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=37.81 E-value=24 Score=27.42 Aligned_cols=83 Identities=12% Similarity=0.149 Sum_probs=49.2
Q ss_pred CcCCCCccCC-CCCCceecCCCCcccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccCCC-CCC
Q 048693 311 LSECNGCKRP-AFGLMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACGRP-ADG 388 (539)
Q Consensus 311 ~~~C~~C~~~-~~g~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~-~~g 388 (539)
...|+.|.+. .....-.|..|+..+...|....-. ..+....|.++....... .....| ... ...
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~---~~~~~~~h~l~~~~~~~~-------~~~~~C---~~H~~e~ 69 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP---NKKPFTGHRLIEPIPDSH-------IRGLMC---LEHEDEK 69 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC---SCSSSTTCCBSSCCCSCC-------SSCCCC---SSCSSSC
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc---cCCccCCCeeeccccccC-------ccCCcC---cCcCCCc
Confidence 3579999974 4556688999999999999753100 011122454432111000 012344 444 244
Q ss_pred ceeecCCCCcccCccccC
Q 048693 389 FVYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 389 ~~Y~C~~C~f~lH~~C~~ 406 (539)
..|.|..|+--+...|..
T Consensus 70 l~~fC~~~~~~iC~~C~~ 87 (101)
T 2jun_A 70 VNMYCVTDDQLICALCKL 87 (101)
T ss_dssp CCEEETTTTEEECHHHHH
T ss_pred ceEECCCCCCccchhcCC
Confidence 678899999888888864
No 222
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=37.77 E-value=39 Score=29.63 Aligned_cols=29 Identities=28% Similarity=0.655 Sum_probs=23.9
Q ss_pred CcCCCCccCCCCCCceecCCCCccccccccc
Q 048693 311 LSECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 311 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
...|..|+.. |..-.|..|+-..|..|..
T Consensus 4 ~~~C~~C~~~--g~ll~Cd~C~~~~H~~C~~ 32 (184)
T 3o36_A 4 EDWCAVCQNG--GELLCCEKCPKVFHLSCHV 32 (184)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECTTTSS
T ss_pred CCccccCCCC--CeeeecCCCCcccCccccC
Confidence 4569999865 4578999999999999974
No 223
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=37.74 E-value=33 Score=23.91 Aligned_cols=29 Identities=24% Similarity=0.737 Sum_probs=24.7
Q ss_pred CcCCCCccCCCCCCceecCCCCccccccccc
Q 048693 311 LSECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 311 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
...|..|+.. |..-.|..|+-.+|..|..
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ 33 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLD 33 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECGGGSS
T ss_pred CCCCcCCCCC--CcEEEcCCCCcCEECCcCC
Confidence 4569999985 5678999999999999986
No 224
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=37.31 E-value=37 Score=24.64 Aligned_cols=29 Identities=24% Similarity=0.612 Sum_probs=22.9
Q ss_pred CCCCccCCC-CCCceecCCCCccccccccc
Q 048693 313 ECNGCKRPA-FGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 313 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
.|..|+... .+..-.|..|+-.+|..|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~ 49 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLD 49 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCC
Confidence 456777664 45668999999999999985
No 225
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=37.14 E-value=1.5e+02 Score=28.85 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=44.7
Q ss_pred CCceEEEEEeCCceeEEEEEEEe-cCeeeEEEe-cCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 048693 63 SEKNVLIFDLGGGTFDVSLLAIE-KGIFKVKAT-AGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAAQRLRKNCE 140 (539)
Q Consensus 63 ~~~~vlvvDiGggTtdisv~~~~-~~~~~v~~~-~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e 140 (539)
....+.+||+|..++-+.|+++. ++.++++.. .....+|-. ++.. -..++..+.|+.+..+
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g-~~~~----------------g~ls~eai~r~~~aL~ 76 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQD-VDKT----------------HRFADEALERAYVAAR 76 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTT-HHHH----------------SSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCC-cccc----------------CCcCHHHHHHHHHHHH
Confidence 35678999999999999999998 455665543 233455533 3311 0235666777777777
Q ss_pred HHHHHcCC
Q 048693 141 RAKRTLSS 148 (539)
Q Consensus 141 ~~K~~ls~ 148 (539)
..|..+..
T Consensus 77 ~f~~~~~~ 84 (343)
T 3cer_A 77 EFAGVIAE 84 (343)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 77776644
No 226
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=36.93 E-value=17 Score=25.46 Aligned_cols=33 Identities=24% Similarity=0.693 Sum_probs=26.2
Q ss_pred CCCcCCCCccCCCCCCceecCC--CCc-ccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCEL--CNF-NLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~~ 342 (539)
.....| .|+.+-.|.+-.|+. |.. -+|..|..+
T Consensus 7 ~e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl 42 (59)
T 3c6w_A 7 NEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDL 42 (59)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred CCCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCc
Confidence 456678 799887788889999 664 899999976
No 227
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=36.66 E-value=84 Score=31.53 Aligned_cols=48 Identities=8% Similarity=0.061 Sum_probs=29.9
Q ss_pred CCeEEEEcCCCC-hHHHHHHHHHHhC---------CCcccccCCcchhhhchHHHHHHH
Q 048693 203 VDDVVIVGGSAR-IPKVQQLLQEFFN---------GKRLCKNINPDEAVAYGAAVQAAV 251 (539)
Q Consensus 203 i~~ViLvGG~s~-~p~i~~~l~~~f~---------~~~v~~~~~p~~avA~GAal~a~~ 251 (539)
++.|+|.||.+. .+.+.+.|++.+. ..++....-.+. .++||+..+..
T Consensus 358 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~~ 415 (429)
T 1z05_A 358 PEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIKQ 415 (429)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHHH
Confidence 568999998876 3555555554431 233444444455 88999987743
No 228
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=36.64 E-value=23 Score=28.18 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=27.2
Q ss_pred CcCCCCccCCC--CCCceecC-CCCcccccccccC
Q 048693 311 LSECNGCKRPA--FGLMYRCE-LCNFNLHIPCMFI 342 (539)
Q Consensus 311 ~~~C~~C~~~~--~g~~Y~C~-~C~f~lH~~Ca~~ 342 (539)
.+.|..|..+. .+.+-.|. .|+--+|..|..+
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVgl 37 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGM 37 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTC
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCc
Confidence 46799999994 56678998 9999999999976
No 229
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=36.48 E-value=21 Score=26.66 Aligned_cols=33 Identities=30% Similarity=0.568 Sum_probs=27.3
Q ss_pred CCCcCCCCccCCC--CCCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPA--FGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
....+| .|+.+- .+.+-.|+.|+--+|..|+.+
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl 44 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGI 44 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTC
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCc
Confidence 456678 788876 567789999999999999976
No 230
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=36.28 E-value=17 Score=25.85 Aligned_cols=33 Identities=21% Similarity=0.534 Sum_probs=26.0
Q ss_pred CCCcCCCCccCCCCCCceecCCCC---cccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCELCN---FNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~ 342 (539)
....+| .|+.+-.|.+-.|..|+ --+|..|..+
T Consensus 9 ~e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl 44 (62)
T 2g6q_A 9 NEPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSL 44 (62)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred CCCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCc
Confidence 356678 79998778788999955 6899999976
No 231
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=36.10 E-value=10 Score=29.39 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=22.9
Q ss_pred ccccccccCC--CCcCCCCccCCC--CCCceecCCC--Cccccccc
Q 048693 300 AHYLQLKNHK--TLSECNGCKRPA--FGLMYRCELC--NFNLHIPC 339 (539)
Q Consensus 300 ~H~L~l~~~~--~~~~C~~C~~~~--~g~~Y~C~~C--~f~lH~~C 339 (539)
.|.--|.... ..-.|-.|..++ .|..|+|+.| +|.+...|
T Consensus 19 ~~~~~~~~~~~~M~~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~C 64 (101)
T 2jne_A 19 HHSSGLVPRGSHMELHCPQCQHVLDQDNGHARCRSCGEFIEMKALC 64 (101)
T ss_dssp ------------CCCBCSSSCSBEEEETTEEEETTTCCEEEEEEEC
T ss_pred ccccccccCcccccccCccCCCcceecCCEEECccccchhhccccC
Confidence 3555554432 346799999876 4556889999 57777777
No 232
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=35.70 E-value=6.2 Score=37.71 Aligned_cols=60 Identities=17% Similarity=0.037 Sum_probs=34.2
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHH-cCC-ceeeeechhHHHHHHhccccccCCCceEEEEEeCCce
Q 048693 10 PVSNAVVTVPAYFTNSQRQATKDAGAM-AGL-NVLNIISEPTAAAIACGLDRKAASEKNVLIFDLGGGT 76 (539)
Q Consensus 10 ~v~~vvitVP~~~~~~~r~~l~~aa~~-AGl-~~~~li~Ep~AAa~~~~~~~~~~~~~~vlvvDiGggT 76 (539)
++..+.|++|..- ......+++..+. .++ .++.+.++..+|+++-. . ....+++=+|.|.
T Consensus 57 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g---~~~~v~v~~GTGi 118 (291)
T 1zxo_A 57 KFNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---G---QKAGIACILGTGS 118 (291)
T ss_dssp ----CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---T---TSCBEEEEESSSE
T ss_pred cccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---C---CCCcEEEEeCCCh
Confidence 4667899999864 2222244444443 454 46899999999998753 1 2223444477766
No 233
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.68 E-value=34 Score=24.51 Aligned_cols=13 Identities=46% Similarity=1.014 Sum_probs=9.9
Q ss_pred CcCCCCccCCCCC
Q 048693 311 LSECNGCKRPAFG 323 (539)
Q Consensus 311 ~~~C~~C~~~~~g 323 (539)
...|.+|+++|.+
T Consensus 5 ~~~C~~C~~~I~~ 17 (72)
T 1x4l_A 5 SSGCAGCTNPISG 17 (72)
T ss_dssp SCSBTTTTBCCCC
T ss_pred CCCCcCCCccccC
Confidence 4568888888875
No 234
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=35.39 E-value=12 Score=28.36 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=28.2
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCCCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNLPR 409 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp~ 409 (539)
..|.+|..-..+--|.|..|+-..|..|..=+.
T Consensus 16 ~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~g 48 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMG 48 (89)
T ss_dssp CCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHT
T ss_pred cccCccccccccceeccccccccccHhhccccc
Confidence 679999987788899999999999999975433
No 235
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=35.19 E-value=17 Score=38.82 Aligned_cols=23 Identities=35% Similarity=0.765 Sum_probs=21.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHHh
Q 048693 204 DDVVIVGGSARIPKVQQLLQEFF 226 (539)
Q Consensus 204 ~~ViLvGG~s~~p~i~~~l~~~f 226 (539)
+.|++|||+|.+|++.-.|.+.+
T Consensus 502 ~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 502 SNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp TCEEEESTTCCCTTHHHHHHHHH
T ss_pred hcEEEEcCcccCccHHHHHHHHH
Confidence 78999999999999999998887
No 236
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=34.63 E-value=19 Score=25.38 Aligned_cols=33 Identities=21% Similarity=0.521 Sum_probs=25.4
Q ss_pred CCCcCCCCccCCCCCCceecCCCC---cccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCELCN---FNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~ 342 (539)
.....| .|+.+-.|.+-.|..|| --+|..|..+
T Consensus 8 ~e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl 43 (60)
T 2vnf_A 8 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGL 43 (60)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred CCCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCC
Confidence 345668 79888778888999944 5799999976
No 237
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=34.54 E-value=27 Score=26.49 Aligned_cols=40 Identities=13% Similarity=0.311 Sum_probs=26.0
Q ss_pred CCcCCCCccCCCCC-CceecCCCCcccccccccCCCCCCCCCCCCCCceeE
Q 048693 310 TLSECNGCKRPAFG-LMYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFK 359 (539)
Q Consensus 310 ~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~ 359 (539)
....|..|++.+.- ..|+|. |+ ..+|.. ..+|--|..++-
T Consensus 24 ~~~rC~~C~kkvgl~~~f~Cr-Cg---~~FC~~------HRy~e~H~C~fD 64 (85)
T 1wff_A 24 IMKHCFLCGKKTGLATSFECR-CG---NNFCAS------HRYAEAHGCNYD 64 (85)
T ss_dssp CCCBCSSSCCBCSSSSCEECT-TC---CEECTT------TCSTGGGTCCSC
T ss_pred cCccchhhCCeecccCCeEcC-CC---CEeccc------CCCccCCCCcch
Confidence 35679999998644 369996 98 456753 334444555553
No 238
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=34.52 E-value=15 Score=27.26 Aligned_cols=43 Identities=14% Similarity=0.285 Sum_probs=24.5
Q ss_pred ccCCC--CCCceeecCCCCcc-cCccccCCCCcccCCCeeEEEecc
Q 048693 381 ACGRP--ADGFVYHCEEKGRN-LHPCCFNLPRKLPIDSVEFELSDK 423 (539)
Q Consensus 381 ~C~~~--~~g~~Y~C~~C~f~-lH~~C~~lp~~i~~~~h~~~l~~~ 423 (539)
+||+. .....|+|..|.++ .+.-|..=-..=.|.+|...+...
T Consensus 6 ~Cg~vf~~ge~~Y~C~~C~~d~tc~lC~~CF~~~~H~gH~~~~~~s 51 (75)
T 3ny3_A 6 LCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTS 51 (75)
T ss_dssp CCCCBCCTTCEEEEETTTBSSTTCCBCHHHHHTSGGGGSCEEEEEC
T ss_pred ccCCcccCCCEEEECccCCCCCCeeEChHHCCCCCcCCceEEEEEc
Confidence 45653 35678999999864 223333222333466777777543
No 239
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.22 E-value=19 Score=27.85 Aligned_cols=32 Identities=28% Similarity=0.615 Sum_probs=26.7
Q ss_pred ccccccCCCC-CCceeecCCCCcccCccccCCC
Q 048693 377 KHCHACGRPA-DGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 377 ~~C~~C~~~~-~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
..|.+|++.. .+..-.|..|+--.|..|...|
T Consensus 17 ~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Pp 49 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPP 49 (92)
T ss_dssp CCCSSSCCSGGGGGCEECTTTCCEECSSSSSSC
T ss_pred CCCccCCCcCCCCCEEEcCCCCchhccccCCCC
Confidence 6799999865 3567899999999999998744
No 240
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=33.82 E-value=30 Score=25.70 Aligned_cols=35 Identities=23% Similarity=0.568 Sum_probs=28.9
Q ss_pred CCCcCCCCccCC-CCCCceecC--CCCcccccccccCCC
Q 048693 309 KTLSECNGCKRP-AFGLMYRCE--LCNFNLHIPCMFIYR 344 (539)
Q Consensus 309 ~~~~~C~~C~~~-~~g~~Y~C~--~C~f~lH~~Ca~~p~ 344 (539)
....+| .|+.+ -.|.+-.|. .|+.-.|..|..++.
T Consensus 14 ~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~ 51 (78)
T 1wew_A 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPD 51 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCC
T ss_pred CCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEcccc
Confidence 456779 69998 467789999 999999999998743
No 241
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=33.69 E-value=31 Score=24.83 Aligned_cols=34 Identities=24% Similarity=0.513 Sum_probs=27.9
Q ss_pred cccccccCCC-CCCceeecC--CCCcccCccccCCCCc
Q 048693 376 NKHCHACGRP-ADGFVYHCE--EKGRNLHPCCFNLPRK 410 (539)
Q Consensus 376 ~~~C~~C~~~-~~g~~Y~C~--~C~f~lH~~C~~lp~~ 410 (539)
..+| .||.. ..|+.-.|. .|+.=.|..|..++..
T Consensus 10 ~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~ 46 (68)
T 2rsd_A 10 KVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDK 46 (68)
T ss_dssp EECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSS
T ss_pred CEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcc
Confidence 4778 79886 468899998 5999999999998654
No 242
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.30 E-value=29 Score=25.84 Aligned_cols=31 Identities=29% Similarity=0.691 Sum_probs=24.9
Q ss_pred cccccCCCC-CCceeecCCCCcccCccccCCC
Q 048693 378 HCHACGRPA-DGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 378 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
.|.+|++.. .+....|..|+-..|..|..-|
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPP 59 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCC
Confidence 688898753 5667889999999999998743
No 243
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=33.23 E-value=1.6e+02 Score=29.93 Aligned_cols=26 Identities=23% Similarity=0.475 Sum_probs=21.9
Q ss_pred CCceEEEEEeCCceeEEEEEEEecCe
Q 048693 63 SEKNVLIFDLGGGTFDVSLLAIEKGI 88 (539)
Q Consensus 63 ~~~~vlvvDiGggTtdisv~~~~~~~ 88 (539)
+...++.+|+||.++-+.++...+..
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 45568999999999999999987654
No 244
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=33.10 E-value=32 Score=28.13 Aligned_cols=26 Identities=19% Similarity=0.752 Sum_probs=18.8
Q ss_pred CcCCCCccCCCC--------CCceecCCCCcccc
Q 048693 311 LSECNGCKRPAF--------GLMYRCELCNFNLH 336 (539)
Q Consensus 311 ~~~C~~C~~~~~--------g~~Y~C~~C~f~lH 336 (539)
..+|.-|+..+. ...|.|..|+|...
T Consensus 4 ~~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 4 FRFCRDCNNMLYPREDKENNRLLFECRTCSYVEE 37 (122)
T ss_dssp CCBCSSSCCBCEEEEETTTTEEEEECSSSSCEEE
T ss_pred CCcccccCccCcccccCcCCCCEEECCcCCCeee
Confidence 346888877663 24699999998654
No 245
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=32.59 E-value=14 Score=28.51 Aligned_cols=62 Identities=23% Similarity=0.434 Sum_probs=36.6
Q ss_pred ceecCCCC---cccccccccCCCCCCCCCCCCCCceeEeccCCCCCCCCcCcCCcccccccCCCC---CCce-eecCCCC
Q 048693 325 MYRCELCN---FNLHIPCMFIYRKPTAKHEFFGNFTFKFLPSLGACSTKDCIDCNKHCHACGRPA---DGFV-YHCEEKG 397 (539)
Q Consensus 325 ~Y~C~~C~---f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~~~~~~~~~~~~~~~~~~C~~C~~~~---~g~~-Y~C~~C~ 397 (539)
.|+|.+|+ |..++.|.. ++|++.-...... .|.|. |+... ..++ =+|..|+
T Consensus 15 av~C~~C~yt~~~~~~~C~~------------~~H~l~~~~a~KR---------FFkC~-C~~Rt~sl~r~P~~~C~~Cg 72 (92)
T 2kwq_A 15 VVTCKTCKYTHFKPKETCVS------------ENHDFHWHNGVKR---------FFKCP-CGNRTISLDRLPKKHCSTCG 72 (92)
T ss_dssp EEEETTTCCEESSCCHHHHH------------TTCCEEEEEEECE---------EEECT-TSCEEEESSSSCCSCCTTTC
T ss_pred EEEccCCcceecCcchhHHh------------cCCceEEEeeeEE---------EEECC-CCCceeEeeeCCCCCCCCCC
Confidence 49999997 445556642 2367776554322 37796 98753 3333 4788887
Q ss_pred cccCccccCCC
Q 048693 398 RNLHPCCFNLP 408 (539)
Q Consensus 398 f~lH~~C~~lp 408 (539)
-.-=..++.++
T Consensus 73 ~~~wer~~M~~ 83 (92)
T 2kwq_A 73 LFKWERVGMLK 83 (92)
T ss_dssp SCCCEEECCCS
T ss_pred CCceEEeeccc
Confidence 54444454443
No 246
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=32.30 E-value=48 Score=23.77 Aligned_cols=33 Identities=27% Similarity=0.602 Sum_probs=26.0
Q ss_pred CCcCCCCccCCC-CCCceecC--CCCcccccccccCC
Q 048693 310 TLSECNGCKRPA-FGLMYRCE--LCNFNLHIPCMFIY 343 (539)
Q Consensus 310 ~~~~C~~C~~~~-~g~~Y~C~--~C~f~lH~~Ca~~p 343 (539)
...+| .|+.+. .|.+-.|. .|+.-.|..|..++
T Consensus 9 ~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~ 44 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIP 44 (68)
T ss_dssp CEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCC
T ss_pred CCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCC
Confidence 45668 588875 57779998 59999999999763
No 247
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=31.85 E-value=16 Score=26.25 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=28.4
Q ss_pred cccccccCCCC--CCceeecC-CCCcccCccccCCCCc
Q 048693 376 NKHCHACGRPA--DGFVYHCE-EKGRNLHPCCFNLPRK 410 (539)
Q Consensus 376 ~~~C~~C~~~~--~g~~Y~C~-~C~f~lH~~C~~lp~~ 410 (539)
...|-.|+++. ..+.-.|. .|+-=+|..|..|...
T Consensus 8 ~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~ 45 (65)
T 2vpb_A 8 VYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTET 45 (65)
T ss_dssp -CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHH
T ss_pred cCcCccCCCccCCCCCeEecccCccccCchhccCCCHH
Confidence 37899999975 45667999 9998899999998753
No 248
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=30.91 E-value=15 Score=27.13 Aligned_cols=34 Identities=21% Similarity=0.546 Sum_probs=27.9
Q ss_pred cccccccCCCC--CCceeecCCCCcccCccccCCCCc
Q 048693 376 NKHCHACGRPA--DGFVYHCEEKGRNLHPCCFNLPRK 410 (539)
Q Consensus 376 ~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~C~~lp~~ 410 (539)
..+| .|+.+. .++...|..|+-=.|..|+.++..
T Consensus 10 ~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~ 45 (75)
T 3kqi_A 10 PVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEE 45 (75)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTT
T ss_pred eeEE-ECCCcCCCCCCEEEcCCCCCCEeccccccccc
Confidence 3667 788853 578899999999999999998754
No 249
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=30.50 E-value=46 Score=30.36 Aligned_cols=30 Identities=23% Similarity=0.593 Sum_probs=22.2
Q ss_pred cCCCCccCCC-CCCceecCCCCccccccccc
Q 048693 312 SECNGCKRPA-FGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 312 ~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
..|..|+... .+..-.|..|+-..|..|..
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~ 205 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLD 205 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCC
Confidence 3588898865 45668999999999999985
No 250
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=30.44 E-value=23 Score=27.14 Aligned_cols=34 Identities=21% Similarity=0.579 Sum_probs=27.2
Q ss_pred CCCcCCCCccCCC---CCCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPA---FGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+....|..|+... .+..-.|..|+-.+|..|...
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p 59 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGV 59 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTC
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCC
Confidence 4566799999875 235689999999999999864
No 251
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.35 E-value=29 Score=26.74 Aligned_cols=32 Identities=28% Similarity=0.573 Sum_probs=26.5
Q ss_pred CCcCCCCccCCC-CCCceecCCCCccccccccc
Q 048693 310 TLSECNGCKRPA-FGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 310 ~~~~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
....|..|+... .+..-.|..|+-..|..|..
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~ 47 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLL 47 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTCCEECSSSSS
T ss_pred CCCCCccCCCcCCCCCEEEcCCCCchhccccCC
Confidence 455699999876 35679999999999999985
No 252
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=30.07 E-value=33 Score=34.44 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCC-ChHHHHHHHHHHhC
Q 048693 177 LNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSA-RIPKVQQLLQEFFN 227 (539)
Q Consensus 177 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f~ 227 (539)
+++-+..+|...|-...... ..+|.|+++||.+ +.+.+++.+.+.+.
T Consensus 309 A~d~f~yri~k~IGa~aa~L----ggvDaIVFTgGIGEns~~vR~~i~~~l~ 356 (415)
T 2e1z_A 309 AIKTFVHRIARHIAGHAASL----HRLDGIIFTGGIGENSVLIRQLVIEHLG 356 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----SSCCEEEEEHHHHHHCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCCEEEECccccccCHHHHHHHHhhHh
Confidence 33444556666666554432 4599999999999 99999999998763
No 253
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=30.00 E-value=94 Score=29.83 Aligned_cols=70 Identities=20% Similarity=0.312 Sum_probs=43.8
Q ss_pred CCCCcEEEEeCCC------------CCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhcccc---------c-cCCCce
Q 048693 9 SPVSNAVVTVPAY------------FTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDR---------K-AASEKN 66 (539)
Q Consensus 9 ~~v~~vvitVP~~------------~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~---------~-~~~~~~ 66 (539)
.++..+.|++|.. |. ..++.+. +..|++.+.+.++..|+|++-.... . ......
T Consensus 65 ~~i~gigi~~pG~vd~~~~~~~nl~w~-~~~~~l~---~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~ 140 (332)
T 1sz2_A 65 VEVKDGCIAIACPITGDWVAMTNHTWA-FSIAEMK---KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKP 140 (332)
T ss_dssp CCCCEEEEEESSCCCSSEECCSSSCCC-EEHHHHH---HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCC
T ss_pred CCccEEEEEEeCceeCCEEeeeCCCCc-CCHHHHH---HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCc
Confidence 4567778888764 44 1233333 3458887899999999999864321 0 123466
Q ss_pred EEEEEeCCceeEEEEEE
Q 048693 67 VLIFDLGGGTFDVSLLA 83 (539)
Q Consensus 67 vlvvDiGggTtdisv~~ 83 (539)
++++-+|.|- -..++.
T Consensus 141 ~~~v~~GTGi-G~giv~ 156 (332)
T 1sz2_A 141 IAVYGAGTGL-GVAHLV 156 (332)
T ss_dssp EEEEEESSSE-EEEEEE
T ss_pred EEEEEcCccc-eEEEEe
Confidence 8888888874 344443
No 254
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=29.83 E-value=26 Score=25.49 Aligned_cols=30 Identities=27% Similarity=0.625 Sum_probs=24.1
Q ss_pred cccccCCCC-CCceeecCCCCcccCccccCC
Q 048693 378 HCHACGRPA-DGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 378 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~C~~l 407 (539)
.|.+|++.. .+....|..|+-..|..|..-
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~P 50 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 50 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCC
Confidence 566788753 567789999999999999873
No 255
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.65 E-value=47 Score=23.63 Aligned_cols=12 Identities=25% Similarity=0.703 Sum_probs=8.8
Q ss_pred cCCCCccCCCCC
Q 048693 312 SECNGCKRPAFG 323 (539)
Q Consensus 312 ~~C~~C~~~~~g 323 (539)
..|..|.++|..
T Consensus 6 ~~C~~C~~~I~~ 17 (72)
T 1wyh_A 6 SGCSACGETVMP 17 (72)
T ss_dssp CBCSSSCCBCCS
T ss_pred CCCccCCCcccc
Confidence 468888888763
No 256
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=29.35 E-value=48 Score=24.61 Aligned_cols=29 Identities=24% Similarity=0.612 Sum_probs=22.9
Q ss_pred CCCCccCCC-CCCceecCCCCccccccccc
Q 048693 313 ECNGCKRPA-FGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 313 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
.|..|++.. .+..-.|..|+-..|..|..
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~ 57 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLD 57 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSS
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCC
Confidence 477777765 34568999999999999975
No 257
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=29.27 E-value=66 Score=32.19 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=50.2
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHH-HHHHhcccccc------CCCc-----------eEEEEEe
Q 048693 11 VSNAVVTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTA-AAIACGLDRKA------ASEK-----------NVLIFDL 72 (539)
Q Consensus 11 v~~vvitVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~A-Aa~~~~~~~~~------~~~~-----------~vlvvDi 72 (539)
+.++|++.|.. +..---.+.-||..+|++.++-+--..| ||++||...-. .++. ..+=+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 56899999973 1112245788999999999999999888 57888764332 1110 1245788
Q ss_pred CCceeEEEEEE
Q 048693 73 GGGTFDVSLLA 83 (539)
Q Consensus 73 GggTtdisv~~ 83 (539)
=+|-+++.|+.
T Consensus 239 ~AGPSEilViA 249 (423)
T 4gic_A 239 VAGPSEILVIS 249 (423)
T ss_dssp CCCCCEEEEEE
T ss_pred ccccceEEEEe
Confidence 88888888775
No 258
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=29.17 E-value=49 Score=22.51 Aligned_cols=14 Identities=21% Similarity=0.892 Sum_probs=11.1
Q ss_pred ceecCCCCcccccc
Q 048693 325 MYRCELCNFNLHIP 338 (539)
Q Consensus 325 ~Y~C~~C~f~lH~~ 338 (539)
.|+|..|+|...+.
T Consensus 3 ~y~C~~CGyvYd~~ 16 (52)
T 1e8j_A 3 IYVCTVCGYEYDPA 16 (52)
T ss_dssp CEECSSSCCCCCTT
T ss_pred cEEeCCCCeEEcCC
Confidence 59999999887643
No 259
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=28.77 E-value=50 Score=29.20 Aligned_cols=28 Identities=29% Similarity=0.925 Sum_probs=23.1
Q ss_pred cCCCCccCCCCCCceecCCCCccccccccc
Q 048693 312 SECNGCKRPAFGLMYRCELCNFNLHIPCMF 341 (539)
Q Consensus 312 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca~ 341 (539)
..|..|+..+ ..-.|..|+-..|..|..
T Consensus 3 ~~C~~C~~~g--~ll~Cd~C~~~~H~~Cl~ 30 (189)
T 2ro1_A 3 TICRVCQKPG--DLVMCNQCEFCFHLDCHL 30 (189)
T ss_dssp CCBTTTCCCS--SCCCCTTTCCBCCSTTST
T ss_pred CcCccCCCCC--ceeECCCCCchhccccCC
Confidence 4689998664 467899999999999975
No 260
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=28.35 E-value=25 Score=36.03 Aligned_cols=60 Identities=22% Similarity=0.468 Sum_probs=0.0
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCCCCcccCC---CeeEEEecccccccccccccccccccccCCCCeEEeecC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNLPRKLPID---SVEFELSDKQLSKKCIWRNSKRLQETVCDRWGWSYVSKC 453 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~lp~~i~~~---~h~~~l~~~~~~~~c~~c~~~c~~~~~~~~~~~~y~~~~ 453 (539)
..|..|......-.|.|..|+ |..|-....-..|. +|+.-+... .+|.||-.|
T Consensus 49 ~~C~~c~~~~~~~~~~cl~cg---~~~c~~~~h~~~H~~~~~h~~~~~~~---------------------~~~~~c~~~ 104 (476)
T 3mhs_A 49 MKCGTCHEINSGATFMCLQCG---FCGCWNHSHFLSHSKQIGHIFGINSN---------------------NGLLFCFKC 104 (476)
T ss_dssp SBCTTTCCBCSSSEEEESSSS---CEEETTTTHHHHHHHHHCCCEEEETT---------------------TCCEEETTT
T ss_pred CCcccccCCCCCCceEeCCCC---CCccCCchHHHHHhcccCCcEEEECC---------------------CCcEEeCCC
Q ss_pred CCeeecc
Q 048693 454 KNYHCHA 460 (539)
Q Consensus 454 ~~~~~H~ 460 (539)
.+|..+.
T Consensus 105 ~~~v~d~ 111 (476)
T 3mhs_A 105 EDYIGNI 111 (476)
T ss_dssp TEEECSC
T ss_pred CCCcccH
No 261
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.12 E-value=57 Score=23.50 Aligned_cols=12 Identities=33% Similarity=0.872 Sum_probs=9.6
Q ss_pred cCCCCccCCCCC
Q 048693 312 SECNGCKRPAFG 323 (539)
Q Consensus 312 ~~C~~C~~~~~g 323 (539)
..|.+|+++|.+
T Consensus 6 ~~C~~C~~~I~~ 17 (73)
T 1wig_A 6 SGCDSCEKYITG 17 (73)
T ss_dssp CSCSSSCCCCSS
T ss_pred CCcccCCCEecC
Confidence 468899988875
No 262
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=27.89 E-value=1.8e+02 Score=27.74 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=25.1
Q ss_pred CceEEEEEeCCceeEEEEEEEecCeeeEEEe
Q 048693 64 EKNVLIFDLGGGTFDVSLLAIEKGIFKVKAT 94 (539)
Q Consensus 64 ~~~vlvvDiGggTtdisv~~~~~~~~~v~~~ 94 (539)
...+.+||+|..++-+.|+++.++.++.+..
T Consensus 11 ~m~~a~IDiGSns~rl~I~~~~~~~~~~i~~ 41 (315)
T 1t6c_A 11 IMRVASIDIGSYSVRLTIAQIKDGKLSIILE 41 (315)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEECcCcEEEEEEEEcCCcEEEEee
Confidence 3578999999999999999998776655533
No 263
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=27.82 E-value=35 Score=25.11 Aligned_cols=32 Identities=28% Similarity=0.587 Sum_probs=26.3
Q ss_pred CCcCCCCccCCCCC-CceecCCCCcccccccccC
Q 048693 310 TLSECNGCKRPAFG-LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 310 ~~~~C~~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~ 342 (539)
...+| .|+.+-.+ .+-.|..|+--+|..|+.+
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl 47 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGI 47 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSC
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEcc
Confidence 34668 79988754 6789999999999999976
No 264
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.65 E-value=51 Score=24.78 Aligned_cols=36 Identities=17% Similarity=0.474 Sum_probs=27.9
Q ss_pred cCCCCcCCCCccCCC--CCCceecCCCCcccccccccC
Q 048693 307 NHKTLSECNGCKRPA--FGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 307 ~~~~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+......|..|..+. ..-+.+|..|+-.+...|...
T Consensus 10 pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp SCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred cCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 334566799999986 334599999999999999753
No 265
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.58 E-value=22 Score=26.89 Aligned_cols=32 Identities=16% Similarity=0.410 Sum_probs=25.6
Q ss_pred CcccccccCCCCCCc--eeecCCCCcccCccccC
Q 048693 375 CNKHCHACGRPADGF--VYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~--~Y~C~~C~f~lH~~C~~ 406 (539)
....|..|+....-+ ..||..|+..+.-.|..
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~ 46 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCS 46 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSC
T ss_pred CCCcCcCcCCccccchhhhhhcCCCcEEChhhcC
Confidence 446899999986433 49999999999988864
No 266
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.51 E-value=67 Score=23.52 Aligned_cols=14 Identities=14% Similarity=0.147 Sum_probs=10.1
Q ss_pred CCcCCCCccCCCCC
Q 048693 310 TLSECNGCKRPAFG 323 (539)
Q Consensus 310 ~~~~C~~C~~~~~g 323 (539)
....|..|.++|.+
T Consensus 14 ~~~~C~~C~~~I~~ 27 (79)
T 2cor_A 14 GKYICQKCHAIIDE 27 (79)
T ss_dssp CCCBCTTTCCBCCS
T ss_pred CCCCCccCCCEecc
Confidence 44568888888764
No 267
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=27.39 E-value=39 Score=29.67 Aligned_cols=29 Identities=24% Similarity=0.552 Sum_probs=24.3
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
-+|.+|++. |-...|..|....|..|..-
T Consensus 5 ~~C~~C~~~--g~ll~Cd~C~~~~H~~C~~p 33 (184)
T 3o36_A 5 DWCAVCQNG--GELLCCEKCPKVFHLSCHVP 33 (184)
T ss_dssp SSCTTTCCC--SSCEECSSSSCEECTTTSSS
T ss_pred CccccCCCC--CeeeecCCCCcccCccccCC
Confidence 679999976 44788999999999999653
No 268
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=27.10 E-value=42 Score=25.15 Aligned_cols=36 Identities=14% Similarity=0.345 Sum_probs=28.0
Q ss_pred cCCCCcCCCCccCCCC--CCceecCCCCcccccccccC
Q 048693 307 NHKTLSECNGCKRPAF--GLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 307 ~~~~~~~C~~C~~~~~--g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
+......|..|..+.. .-+++|..|+-.+...|...
T Consensus 15 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 15 KDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred cCccCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 3445667999999863 34599999999999999754
No 269
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=27.07 E-value=51 Score=24.78 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=28.5
Q ss_pred ccCCCCcCCCCccCCC--CCCceecCCCCcccccccccC
Q 048693 306 KNHKTLSECNGCKRPA--FGLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 306 ~~~~~~~~C~~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.+......|..|..+. ..-+++|..|+-.+...|...
T Consensus 16 ~pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 16 QEDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp CCTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred ccCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 3445567899999985 334599999999999999753
No 270
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=26.84 E-value=14 Score=23.78 Aligned_cols=12 Identities=33% Similarity=0.988 Sum_probs=9.9
Q ss_pred CcccccccCCCC
Q 048693 375 CNKHCHACGRPA 386 (539)
Q Consensus 375 ~~~~C~~C~~~~ 386 (539)
..+.|+.||+++
T Consensus 16 ~YRvC~~CgkPi 27 (44)
T 2lo3_A 16 QYRVCEKCGKPL 27 (44)
T ss_dssp CEEECTTTCCEE
T ss_pred cchhhcccCCcc
Confidence 358999999975
No 271
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.79 E-value=43 Score=24.32 Aligned_cols=12 Identities=42% Similarity=1.002 Sum_probs=9.6
Q ss_pred cCCCCccCCCCC
Q 048693 312 SECNGCKRPAFG 323 (539)
Q Consensus 312 ~~C~~C~~~~~g 323 (539)
..|..|.++|.+
T Consensus 6 ~~C~~C~~~I~~ 17 (76)
T 1x68_A 6 SGCVACSKPISG 17 (76)
T ss_dssp CCCTTTCCCCCT
T ss_pred CCCccCCCcccC
Confidence 468999998875
No 272
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=26.63 E-value=54 Score=24.65 Aligned_cols=16 Identities=19% Similarity=0.576 Sum_probs=12.1
Q ss_pred CCCcCCCCccCCCCCC
Q 048693 309 KTLSECNGCKRPAFGL 324 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~ 324 (539)
.....|..|.++|.+.
T Consensus 23 ~~~~~C~~C~~~I~~~ 38 (89)
T 1x64_A 23 QRMPLCDKCGSGIVGA 38 (89)
T ss_dssp CSCCBCTTTCCBCCSC
T ss_pred CcCCCcccCCCEeccc
Confidence 3456799999998763
No 273
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=26.51 E-value=37 Score=24.66 Aligned_cols=12 Identities=50% Similarity=1.257 Sum_probs=8.5
Q ss_pred cCCCCccCCCCC
Q 048693 312 SECNGCKRPAFG 323 (539)
Q Consensus 312 ~~C~~C~~~~~g 323 (539)
..|.+|.++|.+
T Consensus 16 ~~C~~C~~~I~~ 27 (77)
T 2egq_A 16 KKCAGCKNPITG 27 (77)
T ss_dssp CCCSSSCCCCCC
T ss_pred ccCcccCCcccC
Confidence 457888777764
No 274
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=26.20 E-value=43 Score=25.61 Aligned_cols=31 Identities=23% Similarity=0.431 Sum_probs=25.3
Q ss_pred cccccccCCCCCCc--eeecCCCCcccCccccC
Q 048693 376 NKHCHACGRPADGF--VYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 376 ~~~C~~C~~~~~g~--~Y~C~~C~f~lH~~C~~ 406 (539)
...|..|+....-+ .+||..|+..+...|..
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~ 52 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVCCN 52 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcccC
Confidence 46799999876433 59999999999999975
No 275
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=26.07 E-value=46 Score=25.46 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=26.8
Q ss_pred CCCcCCCCccCCCC--CCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPAF--GLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~--g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.....|..|..+.. .-+++|..|+..+...|...
T Consensus 18 ~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 18 SEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred ccCCcCcCCCCcccchhhCccccCCCCEECCcccCC
Confidence 44567999998763 34599999999999999753
No 276
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=25.79 E-value=58 Score=25.04 Aligned_cols=33 Identities=24% Similarity=0.655 Sum_probs=26.6
Q ss_pred CCCcCCCCccCCCCCCceecCC--CC-cccccccccC
Q 048693 309 KTLSECNGCKRPAFGLMYRCEL--CN-FNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~~Y~C~~--C~-f~lH~~Ca~~ 342 (539)
....+| .|+.+-.|.+-.|.. |. --+|..|..+
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl 69 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGL 69 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTC
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCc
Confidence 456778 899987788889999 65 4699999876
No 277
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=25.69 E-value=1.5e+02 Score=30.18 Aligned_cols=25 Identities=36% Similarity=0.656 Sum_probs=21.1
Q ss_pred CCceEEEEEeCCceeEEEEEEEecC
Q 048693 63 SEKNVLIFDLGGGTFDVSLLAIEKG 87 (539)
Q Consensus 63 ~~~~vlvvDiGggTtdisv~~~~~~ 87 (539)
+...++.+|+||.++-+..+++.++
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 3457999999999999999999754
No 278
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.65 E-value=49 Score=23.53 Aligned_cols=12 Identities=33% Similarity=0.819 Sum_probs=8.8
Q ss_pred cCCCCccCCCCC
Q 048693 312 SECNGCKRPAFG 323 (539)
Q Consensus 312 ~~C~~C~~~~~g 323 (539)
..|..|.++|..
T Consensus 6 ~~C~~C~~~I~~ 17 (72)
T 1x4k_A 6 SGCQECKKTIMP 17 (72)
T ss_dssp CCBSSSCCCCCS
T ss_pred CCCccCCCcccC
Confidence 468888888763
No 279
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=25.27 E-value=16 Score=25.66 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=21.7
Q ss_pred ccccccCCCC-CCceeecCCCC--------cccCcccc
Q 048693 377 KHCHACGRPA-DGFVYHCEEKG--------RNLHPCCF 405 (539)
Q Consensus 377 ~~C~~C~~~~-~g~~Y~C~~C~--------f~lH~~C~ 405 (539)
..|.+|+... ....|.|..|+ |..|..|.
T Consensus 12 ~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~Hk~Cs 49 (59)
T 1x4s_A 12 GPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGTCA 49 (59)
T ss_dssp EEECSSCTTCCEEECEECTTTCCEESSHHHHHHHCCGG
T ss_pred CcCcCCCCCcCCCccccCcCCCCCccChHHHHHHhHhC
Confidence 6899998643 44679999998 45677775
No 280
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.20 E-value=43 Score=22.55 Aligned_cols=24 Identities=33% Similarity=0.703 Sum_probs=17.5
Q ss_pred cccccccCCCC----CCceeecCCCCcc
Q 048693 376 NKHCHACGRPA----DGFVYHCEEKGRN 399 (539)
Q Consensus 376 ~~~C~~C~~~~----~g~~Y~C~~C~f~ 399 (539)
...|..||..+ ..-.++|..|+|.
T Consensus 19 ~k~CP~CG~~~fm~~~~~R~~C~kCG~t 46 (50)
T 3j20_Y 19 NKFCPRCGPGVFMADHGDRWACGKCGYT 46 (50)
T ss_dssp SEECSSSCSSCEEEECSSEEECSSSCCE
T ss_pred cccCCCCCCceEEecCCCeEECCCCCCE
Confidence 46799998743 3346899999974
No 281
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=25.16 E-value=32 Score=24.62 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=26.0
Q ss_pred CCCcCCCCccCCCCC--CceecC-CCCcccccccccC
Q 048693 309 KTLSECNGCKRPAFG--LMYRCE-LCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g--~~Y~C~-~C~f~lH~~Ca~~ 342 (539)
+....|..|+.+... ..=.|+ .|+--+|..|..+
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvgl 42 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGM 42 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTC
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCC
Confidence 456679999999743 446899 9999999999976
No 282
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=24.85 E-value=52 Score=24.62 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=25.7
Q ss_pred CcccccccCCCCCCc--eeecCCCCcccCccccC
Q 048693 375 CNKHCHACGRPADGF--VYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 375 ~~~~C~~C~~~~~g~--~Y~C~~C~f~lH~~C~~ 406 (539)
....|..|+....-+ .+||..||..+.-.|..
T Consensus 18 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~ 51 (82)
T 2yw8_A 18 EATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSS 51 (82)
T ss_dssp CCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGC
T ss_pred cCCcccCcCCcccCccccccCCCCCCEEChHHhC
Confidence 346799999976433 49999999999999975
No 283
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=24.80 E-value=40 Score=23.87 Aligned_cols=14 Identities=21% Similarity=0.358 Sum_probs=9.8
Q ss_pred CcCCCCccCCCCCC
Q 048693 311 LSECNGCKRPAFGL 324 (539)
Q Consensus 311 ~~~C~~C~~~~~g~ 324 (539)
...|..|++++.+.
T Consensus 11 ~~~C~~C~~~i~~~ 24 (72)
T 3f6q_B 11 SATCERCKGGFAPA 24 (72)
T ss_dssp TCBCTTTCCBCCTT
T ss_pred CccchhcCccccCC
Confidence 44688888887643
No 284
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.76 E-value=29 Score=25.05 Aligned_cols=43 Identities=21% Similarity=0.427 Sum_probs=27.0
Q ss_pred CCCcCCCCccCCCCCC---ceecCCCCcccccccccCCCCCCCCCCCCCCceeEec
Q 048693 309 KTLSECNGCKRPAFGL---MYRCELCNFNLHIPCMFIYRKPTAKHEFFGNFTFKFL 361 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g~---~Y~C~~C~f~lH~~Ca~~p~~~~~~h~~~~~h~l~l~ 361 (539)
.....|..|++.+.-. -|+| .|+ ..+|+. ..+|--|..++-+.
T Consensus 13 ~~~~rC~~C~kk~gL~~~egf~C-rCg---~~FC~~------HRy~e~H~C~fDyk 58 (67)
T 1x4w_A 13 KSRRRCFQCQTKLELVQQELGSC-RCG---YVFCML------HRLPEQHDCTFDHM 58 (67)
T ss_dssp SCTTBCSSSCCBCCHHHHHHHCC-SSS---CCCCTT------TCSTGGGTCSSCSS
T ss_pred ccCCcchhhCCeecccccCceEe-cCC---CEehhc------cCCccccCCccccc
Confidence 3456799999987543 2999 898 455653 34444555555543
No 285
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=24.67 E-value=46 Score=25.37 Aligned_cols=33 Identities=27% Similarity=0.531 Sum_probs=26.4
Q ss_pred CCcCCCCccCCC----CC-CceecCCCCcccccccccC
Q 048693 310 TLSECNGCKRPA----FG-LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 310 ~~~~C~~C~~~~----~g-~~Y~C~~C~f~lH~~Ca~~ 342 (539)
....|..|+..+ .| .|--|..|.|-++..|...
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY 52 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY 52 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHH
Confidence 456799999985 23 5688999999999999654
No 286
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=24.34 E-value=35 Score=27.64 Aligned_cols=21 Identities=24% Similarity=0.607 Sum_probs=12.7
Q ss_pred ccccccCCCC--CCcee-ecCCCC
Q 048693 377 KHCHACGRPA--DGFVY-HCEEKG 397 (539)
Q Consensus 377 ~~C~~C~~~~--~g~~Y-~C~~C~ 397 (539)
+.|..||... ....+ .|..|+
T Consensus 74 ~~C~~CG~~~e~~~~~~~~CP~Cg 97 (119)
T 2kdx_A 74 LECKDCSHVFKPNALDYGVCEKCH 97 (119)
T ss_dssp EECSSSSCEECSCCSTTCCCSSSS
T ss_pred EEcCCCCCEEeCCCCCCCcCcccc
Confidence 7899998753 33344 455543
No 287
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=24.22 E-value=29 Score=21.55 Aligned_cols=15 Identities=40% Similarity=1.030 Sum_probs=11.6
Q ss_pred CCceecCCCCccccc
Q 048693 323 GLMYRCELCNFNLHI 337 (539)
Q Consensus 323 g~~Y~C~~C~f~lH~ 337 (539)
..+|+|+.|+..+-.
T Consensus 4 ~~fY~C~~CGnivev 18 (36)
T 1dxg_A 4 GDVYKCELCGQVVKV 18 (36)
T ss_dssp TCEEECTTTCCEEEE
T ss_pred ccEEEcCCCCcEEEE
Confidence 457999999877654
No 288
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.13 E-value=40 Score=24.41 Aligned_cols=13 Identities=23% Similarity=0.473 Sum_probs=9.4
Q ss_pred CCcCCCCccCCCC
Q 048693 310 TLSECNGCKRPAF 322 (539)
Q Consensus 310 ~~~~C~~C~~~~~ 322 (539)
....|.+|++++.
T Consensus 10 ~~~~C~~C~~~I~ 22 (77)
T 1g47_A 10 ASATCERCKGGFA 22 (77)
T ss_dssp CCCBCSSSCCBCC
T ss_pred CCCCchhcCCccC
Confidence 3456888888885
No 289
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=24.10 E-value=16 Score=36.92 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=0.0
Q ss_pred CCCcCCCCccCCCC--CCceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPAF--GLMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~--g~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.....|..|..+.. ..+++|..|+-.++..|...
T Consensus 373 ~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~ 408 (434)
T 3mpx_A 373 THVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRN 408 (434)
T ss_dssp ------------------------------------
T ss_pred ccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCC
Confidence 34567999998763 23499999999999999743
No 290
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=23.99 E-value=45 Score=27.13 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=25.3
Q ss_pred CCCcCCCCccCCCCC--CceecCCCCcccccccccC
Q 048693 309 KTLSECNGCKRPAFG--LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 309 ~~~~~C~~C~~~~~g--~~Y~C~~C~f~lH~~Ca~~ 342 (539)
.....|..|..+..- -+.+|..|+..+...|...
T Consensus 17 ~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~ 52 (120)
T 1y02_A 17 GLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQ 52 (120)
T ss_dssp ---CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC
T ss_pred cccCcccCcCCccccccccccCCCCCCeeCHHHhCC
Confidence 344579999998632 3499999999999999754
No 291
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=23.68 E-value=49 Score=27.11 Aligned_cols=31 Identities=26% Similarity=0.518 Sum_probs=24.9
Q ss_pred cccccccCCCCCCc--eeecCCCCcccCccccC
Q 048693 376 NKHCHACGRPADGF--VYHCEEKGRNLHPCCFN 406 (539)
Q Consensus 376 ~~~C~~C~~~~~g~--~Y~C~~C~f~lH~~C~~ 406 (539)
...|..|+....-+ .+||..||..+...|..
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~ 101 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 101 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHHhC
Confidence 36799999876433 49999999999998965
No 292
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=23.56 E-value=57 Score=21.92 Aligned_cols=33 Identities=18% Similarity=0.445 Sum_probs=25.8
Q ss_pred cccccCCCC--CCceeecC-CCCcccCccccCCCCc
Q 048693 378 HCHACGRPA--DGFVYHCE-EKGRNLHPCCFNLPRK 410 (539)
Q Consensus 378 ~C~~C~~~~--~g~~Y~C~-~C~f~lH~~C~~lp~~ 410 (539)
.|-.|+++. .++...|. .|+-=.|..|+.|...
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~ 39 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPE 39 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHH
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCcc
Confidence 366778765 45678999 8998899999998754
No 293
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=23.40 E-value=39 Score=30.32 Aligned_cols=30 Identities=23% Similarity=0.531 Sum_probs=24.8
Q ss_pred cccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 376 NKHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 376 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
.-+|.+|++. |-...|..|+-..|..|..-
T Consensus 7 ~~~C~~C~~~--g~ll~Cd~C~~~~H~~Cl~p 36 (207)
T 3u5n_A 7 EDWCAVCQNG--GDLLCCEKCPKVFHLTCHVP 36 (207)
T ss_dssp CSSBTTTCCC--EEEEECSSSSCEECTTTSSS
T ss_pred CCCCCCCCCC--CceEEcCCCCCccCCccCCC
Confidence 3679999975 45788999999999999753
No 294
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=23.24 E-value=84 Score=31.35 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCC-ChHHHHHHHHHHhC
Q 048693 177 LNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSA-RIPKVQQLLQEFFN 227 (539)
Q Consensus 177 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f~ 227 (539)
+++-+..+|...|-......+ .+|.|+++||.+ +.+.+++.+.+.+.
T Consensus 301 A~d~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 301 VLEIYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 334455566666665555433 489999999999 99999999998773
No 295
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=23.10 E-value=2.3e+02 Score=28.60 Aligned_cols=30 Identities=30% Similarity=0.635 Sum_probs=24.0
Q ss_pred CCceEEEEEeCCceeEEEEEEEecCeeeEEE
Q 048693 63 SEKNVLIFDLGGGTFDVSLLAIEKGIFKVKA 93 (539)
Q Consensus 63 ~~~~vlvvDiGggTtdisv~~~~~~~~~v~~ 93 (539)
+...++.+|+||.++-+.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 3457899999999999999999765 44443
No 296
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=23.07 E-value=1.1e+02 Score=28.77 Aligned_cols=56 Identities=16% Similarity=0.295 Sum_probs=35.9
Q ss_pred EEeCCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhcccccc----------------CCCceEEEEEeCCcee
Q 048693 16 VTVPAYFTNSQRQATKDAGAMAGLNVLNIISEPTAAAIACGLDRKA----------------ASEKNVLIFDLGGGTF 77 (539)
Q Consensus 16 itVP~~~~~~~r~~l~~aa~~AGl~~~~li~Ep~AAa~~~~~~~~~----------------~~~~~vlvvDiGggTt 77 (539)
|+.|+-|+... -++++.+|++.+ ++..+.+++ .++..... ..+...+++|++.|+.
T Consensus 19 i~~~tayDa~s----A~l~e~aG~d~i-lvGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy 90 (275)
T 1o66_A 19 IAMLTAYESSF----AALMDDAGVEML-LVGDSLGMA-VQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAY 90 (275)
T ss_dssp EEEEECCSHHH----HHHHHHTTCCEE-EECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSS
T ss_pred EEEEeCcCHHH----HHHHHHcCCCEE-EECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCc
Confidence 67888899763 455667899987 566666643 33333221 1344578899998764
No 297
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=22.93 E-value=94 Score=29.10 Aligned_cols=59 Identities=20% Similarity=0.337 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHHHHH
Q 048693 185 CIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQA 249 (539)
Q Consensus 185 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAal~a 249 (539)
..+.+++.++.. ...++|.|+| |.+.+|++.+.|++.++ .++ ..+||-+++|+-+.-+-
T Consensus 163 ~~~~l~~~l~~l--~~~g~D~iVL--GCTh~pll~~~i~~~~~-~~v-~vIDs~~~~a~~~~~~l 221 (269)
T 3ist_A 163 AKKVVAESLLPL--KSTKIDTVIL--GCTHYPLLKPIIENFMG-DGV-AVINSGEETASEVSALL 221 (269)
T ss_dssp HHHHHHHHHGGG--GGSCCCEEEE--CSTTGGGGHHHHHHHHC-TTS-EEECTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HhCCCCEEEE--CCCCHHHHHHHHHHHcC-CCC-eEECcHHHHHHHHHHHH
Confidence 344455555432 2346889988 99999999999999994 333 23588888776655443
No 298
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=22.76 E-value=1.5e+02 Score=28.40 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=25.1
Q ss_pred CceEEEEEeCCceeEEEEEEEecCeeeEEEe
Q 048693 64 EKNVLIFDLGGGTFDVSLLAIEKGIFKVKAT 94 (539)
Q Consensus 64 ~~~vlvvDiGggTtdisv~~~~~~~~~v~~~ 94 (539)
...+.+||+|..++-+.|+++.++.++++..
T Consensus 3 ~~~~A~IDiGSNsirL~I~~~~~~~~~~i~~ 33 (315)
T 3mdq_A 3 SQRIGVIDMGTNTFHLLITDIVNDRPHTLVN 33 (315)
T ss_dssp -CEEEEEEECSSEEEEEEEEEETTEEEEEEE
T ss_pred CceEEEEEecCCcEEEEEEEEcCCceEEeee
Confidence 4568999999999999999998776666543
No 299
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=22.61 E-value=57 Score=24.81 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=26.0
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 048693 13 NAVVTVPAYFTNSQRQATKDAGAMAGLNV 41 (539)
Q Consensus 13 ~vvitVP~~~~~~~r~~l~~aa~~AGl~~ 41 (539)
.-.++-|+.++..+|..+-+.|+..||..
T Consensus 33 ~~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 33 KMQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp CSEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred CcEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 35789999999999999999999999964
No 300
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=22.53 E-value=48 Score=29.29 Aligned_cols=29 Identities=21% Similarity=0.465 Sum_probs=23.7
Q ss_pred ccccccCCCCCCceeecCCCCcccCccccCC
Q 048693 377 KHCHACGRPADGFVYHCEEKGRNLHPCCFNL 407 (539)
Q Consensus 377 ~~C~~C~~~~~g~~Y~C~~C~f~lH~~C~~l 407 (539)
-.|.+|++.. -...|..|+-..|..|..-
T Consensus 3 ~~C~~C~~~g--~ll~Cd~C~~~~H~~Cl~p 31 (189)
T 2ro1_A 3 TICRVCQKPG--DLVMCNQCEFCFHLDCHLP 31 (189)
T ss_dssp CCBTTTCCCS--SCCCCTTTCCBCCSTTSTT
T ss_pred CcCccCCCCC--ceeECCCCCchhccccCCC
Confidence 5699999763 4677999999999999753
No 301
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=22.50 E-value=40 Score=23.12 Aligned_cols=24 Identities=13% Similarity=0.260 Sum_probs=15.7
Q ss_pred cccccccCCCC-----------CCceeecCCCCcc
Q 048693 376 NKHCHACGRPA-----------DGFVYHCEEKGRN 399 (539)
Q Consensus 376 ~~~C~~C~~~~-----------~g~~Y~C~~C~f~ 399 (539)
.+.|+.||+.. ..-.|.|..|+..
T Consensus 14 ~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~ 48 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTE 48 (62)
T ss_dssp EEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCB
T ss_pred CccCCCCCchhccHHHhHhhcCCCCCEECCCCCCc
Confidence 37788888731 2346888888743
No 302
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=22.23 E-value=24 Score=24.62 Aligned_cols=26 Identities=23% Similarity=0.320 Sum_probs=15.9
Q ss_pred CCCcCCCCccCCCC-------------C-CceecCCCCcc
Q 048693 309 KTLSECNGCKRPAF-------------G-LMYRCELCNFN 334 (539)
Q Consensus 309 ~~~~~C~~C~~~~~-------------g-~~Y~C~~C~f~ 334 (539)
+.+|.|+.|+.... | ..|.|..|+-.
T Consensus 2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~ 41 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKC 41 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCE
T ss_pred CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCC
Confidence 35677877776532 1 13888888643
No 303
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=22.00 E-value=1e+02 Score=29.26 Aligned_cols=48 Identities=17% Similarity=0.103 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhC
Q 048693 177 LNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFN 227 (539)
Q Consensus 177 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~ 227 (539)
+++...+.+.+.++++|++++++.++|+.|+.-|++.+ +-+.+.+.|+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~lg 259 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLR---IISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHH---HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHcC
Confidence 44445667888999999999999999999998887655 3467888883
No 304
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=21.99 E-value=79 Score=31.62 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCC-ChHHHHHHHHHHh
Q 048693 177 LNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSA-RIPKVQQLLQEFF 226 (539)
Q Consensus 177 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f 226 (539)
+++-+..+|...|-...... ..+|.|+++||.+ +.+.+++.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34445566666666665544 3589999999999 9999999999766
No 305
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=21.98 E-value=1.4e+02 Score=27.06 Aligned_cols=46 Identities=20% Similarity=0.192 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHH
Q 048693 173 RFEELNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQ 223 (539)
Q Consensus 173 e~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~ 223 (539)
+-+++.+.+.+.|.+.+++.+++.+ .-.+.|.||++-.+..+.+++
T Consensus 9 ~~~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~LsgGstp~~~y~~L~~ 54 (226)
T 3lwd_A 9 GRQRLAERLADTVAQALEADLAKRE-----RALLVVSGGSTPKPFFTSLAA 54 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSS-----CEEEEECCSSTTHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHh
Confidence 3445555556666666777765432 247889999999888877764
No 306
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=21.51 E-value=85 Score=25.24 Aligned_cols=11 Identities=18% Similarity=0.579 Sum_probs=8.3
Q ss_pred CCCCccCCCCC
Q 048693 313 ECNGCKRPAFG 323 (539)
Q Consensus 313 ~C~~C~~~~~g 323 (539)
.|..|.+++..
T Consensus 10 ~C~~C~~~I~~ 20 (123)
T 2l3k_A 10 LCASCDKRIRA 20 (123)
T ss_dssp CCSSSSCCCCT
T ss_pred cccCCCCeecC
Confidence 68888888753
No 307
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=21.16 E-value=71 Score=31.81 Aligned_cols=46 Identities=11% Similarity=0.083 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCC-ChHHHHHHHHHHh
Q 048693 177 LNMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSA-RIPKVQQLLQEFF 226 (539)
Q Consensus 177 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f 226 (539)
+++-+..++...|-...... .++|.|+++||-+ +.+.+++.|.+.+
T Consensus 302 a~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 302 AYDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHH
Confidence 34445555555555544432 3589999999998 5688999998876
No 308
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=20.90 E-value=3e+02 Score=27.77 Aligned_cols=23 Identities=35% Similarity=0.593 Sum_probs=20.6
Q ss_pred CceEEEEEeCCceeEEEEEEEec
Q 048693 64 EKNVLIFDLGGGTFDVSLLAIEK 86 (539)
Q Consensus 64 ~~~vlvvDiGggTtdisv~~~~~ 86 (539)
...++.+|+||.++-+.++++.+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 46689999999999999999976
No 309
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.80 E-value=1e+02 Score=22.61 Aligned_cols=13 Identities=15% Similarity=0.368 Sum_probs=10.0
Q ss_pred CCcCCCCccCCCC
Q 048693 310 TLSECNGCKRPAF 322 (539)
Q Consensus 310 ~~~~C~~C~~~~~ 322 (539)
....|..|+++|.
T Consensus 14 ~~~~C~~C~~~I~ 26 (82)
T 2co8_A 14 AGDLCALCGEHLY 26 (82)
T ss_dssp SSCBCSSSCCBCC
T ss_pred CCCCCcccCCCcc
Confidence 4567999999885
No 310
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=20.77 E-value=1e+02 Score=28.97 Aligned_cols=53 Identities=11% Similarity=0.257 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEEcCCCChHHHHHHHHHHhCCCcccccCCcchhhhchHH
Q 048693 186 IKHVDMCLRTGKTDKSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAA 246 (539)
Q Consensus 186 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~i~~~l~~~f~~~~v~~~~~p~~avA~GAa 246 (539)
.+.+++.++... .+|.|+| |.+.+|++.+.+++.++ .++. .+||-+++|+-+.
T Consensus 184 ~~~~~~~l~~l~----g~D~iIL--GCTh~PlL~~~i~~~~~-~~v~-lIDs~~~~A~~~~ 236 (274)
T 3uhf_A 184 QSAMEYYFKNIT----TPDALIL--ACTHFPLLGRSLSKYFG-DKTK-LIHSGDAIVEFLK 236 (274)
T ss_dssp HHHHHHHHTTCC----CCSEEEE--CSTTGGGGHHHHHHHHC-TTCE-EEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhc----CCCEEEE--CCCChHHHHHHHHHHcC-CCCE-EEcCHHHHHHHHH
Confidence 445555555432 5889998 99999999999999994 2332 2467666665443
No 311
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=20.73 E-value=98 Score=30.59 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEcCCC-ChHHHHHHHHHHhC
Q 048693 178 NMDLFRKCIKHVDMCLRTGKTDKSSVDDVVIVGGSA-RIPKVQQLLQEFFN 227 (539)
Q Consensus 178 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~i~~~l~~~f~ 227 (539)
++-+..++...|-...... ..+|.|+++||.+ +.+.+++.+.+.+.
T Consensus 293 ~d~f~yri~k~IGa~aa~L----~gvDaIVFTgGIgEns~~iR~~i~~~l~ 339 (384)
T 3khy_A 293 IEIFSHRVAKFVASYMIYF----NKLDALVFTGGIGENAANIRKNIISKLA 339 (384)
T ss_dssp HHHHHHHHHHHHHHHGGGC----SSCCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhcc
Confidence 3444556666665554432 2599999999998 77889999988763
No 312
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=20.65 E-value=50 Score=24.49 Aligned_cols=31 Identities=29% Similarity=0.686 Sum_probs=24.3
Q ss_pred cccccCCCC-CCceeecCCCCcccCccccCCC
Q 048693 378 HCHACGRPA-DGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 378 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
.|.+|++.. .+....|..|+-..|..|..-|
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 59 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSC
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCc
Confidence 577787754 3567889999999999998744
No 313
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=20.64 E-value=14 Score=32.74 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=17.8
Q ss_pred CcCCCCccCCCCCCceecCCCCcccccccc
Q 048693 311 LSECNGCKRPAFGLMYRCELCNFNLHIPCM 340 (539)
Q Consensus 311 ~~~C~~C~~~~~g~~Y~C~~C~f~lH~~Ca 340 (539)
...|.+|+++|.+. |.-..-+-..|..|.
T Consensus 5 ~~~C~~C~~~I~~~-~~~~a~~~~wH~~CF 33 (188)
T 1rut_X 5 WKRCAGCGGKIADR-FLLYAMDSYWHSRCL 33 (188)
T ss_dssp CCBBTTTCCBCCCS-EEEEETTEEECGGGC
T ss_pred CCcCccCCCEeCCc-eeEEecCcEecccCc
Confidence 45699999999764 222233445566554
No 314
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=20.56 E-value=45 Score=23.76 Aligned_cols=23 Identities=30% Similarity=0.593 Sum_probs=14.3
Q ss_pred ccccccCCCC---CCceeecCCCCcc
Q 048693 377 KHCHACGRPA---DGFVYHCEEKGRN 399 (539)
Q Consensus 377 ~~C~~C~~~~---~g~~Y~C~~C~f~ 399 (539)
+.|..||... .+-..+|..|++.
T Consensus 22 Y~C~~Cg~~~~l~~~~~iRC~~CG~R 47 (63)
T 3h0g_L 22 YLCADCGARNTIQAKEVIRCRECGHR 47 (63)
T ss_dssp CBCSSSCCBCCCCSSSCCCCSSSCCC
T ss_pred EECCCCCCeeecCCCCceECCCCCcE
Confidence 6677777643 2345677777754
No 315
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=20.52 E-value=52 Score=30.01 Aligned_cols=31 Identities=29% Similarity=0.686 Sum_probs=22.6
Q ss_pred cccccCCCC-CCceeecCCCCcccCccccCCC
Q 048693 378 HCHACGRPA-DGFVYHCEEKGRNLHPCCFNLP 408 (539)
Q Consensus 378 ~C~~C~~~~-~g~~Y~C~~C~f~lH~~C~~lp 408 (539)
.|..|++.. .+..-.|..|+-..|..|..-|
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PP 207 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 207 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC--CC
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccCCCC
Confidence 699998754 4567899999999999998743
No 316
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=20.24 E-value=53 Score=28.93 Aligned_cols=31 Identities=23% Similarity=0.450 Sum_probs=24.5
Q ss_pred cCCCCccCCCCC-----CceecCCCCcccccccccC
Q 048693 312 SECNGCKRPAFG-----LMYRCELCNFNLHIPCMFI 342 (539)
Q Consensus 312 ~~C~~C~~~~~g-----~~Y~C~~C~f~lH~~Ca~~ 342 (539)
..|..|+.+-.. .+-.|..|+.-+|..|..+
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi 38 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENL 38 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhcccc
Confidence 358899887422 3679999999999999865
Done!