Query 048694
Match_columns 193
No_of_seqs 130 out of 1257
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 21:12:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048694.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048694hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hb9_A Similarities with proba 100.0 2.9E-31 9.8E-36 211.8 13.1 114 66-184 267-380 (412)
2 3rp8_A Flavoprotein monooxygen 100.0 1E-29 3.5E-34 203.4 16.4 177 1-186 172-368 (407)
3 2vou_A 2,6-dihydroxypyridine h 99.9 7.3E-27 2.5E-31 186.4 15.3 172 1-186 144-366 (397)
4 3c96_A Flavin-containing monoo 99.9 3.3E-26 1.1E-30 183.3 15.7 173 1-186 160-371 (410)
5 2xdo_A TETX2 protein; tetracyc 99.9 1.7E-26 5.8E-31 184.3 12.0 176 1-186 173-383 (398)
6 2qa2_A CABE, polyketide oxygen 99.9 4.3E-26 1.5E-30 186.8 14.6 180 1-186 157-348 (499)
7 2qa1_A PGAE, polyketide oxygen 99.9 3.3E-26 1.1E-30 187.6 13.8 180 1-186 156-347 (500)
8 3alj_A 2-methyl-3-hydroxypyrid 99.9 3.7E-27 1.3E-31 187.0 6.9 174 1-183 151-345 (379)
9 2x3n_A Probable FAD-dependent 99.9 6.9E-26 2.4E-30 180.7 12.1 176 1-186 157-357 (399)
10 1pn0_A Phenol 2-monooxygenase; 99.9 3E-26 1E-30 193.4 9.8 181 1-186 221-421 (665)
11 3c4a_A Probable tryptophan hyd 99.9 2.7E-25 9.4E-30 176.4 12.8 74 108-186 256-329 (381)
12 2r0c_A REBC; flavin adenine di 99.9 2.8E-25 9.5E-30 184.0 8.8 182 1-186 187-379 (549)
13 3fmw_A Oxygenase; mithramycin, 99.9 1.7E-24 5.8E-29 179.8 12.7 180 1-186 198-392 (570)
14 3ihg_A RDME; flavoenzyme, anth 99.9 1E-24 3.5E-29 180.1 11.2 183 1-186 174-371 (535)
15 2dkh_A 3-hydroxybenzoate hydro 99.9 3.9E-24 1.3E-28 179.9 10.2 178 1-184 202-410 (639)
16 3oz2_A Digeranylgeranylglycero 99.9 1E-23 3.4E-28 167.1 11.1 173 1-183 153-345 (397)
17 1k0i_A P-hydroxybenzoate hydro 99.9 9.8E-24 3.4E-28 167.9 10.1 74 108-184 273-346 (394)
18 3e1t_A Halogenase; flavoprotei 99.9 1.4E-22 4.7E-27 166.6 15.3 185 1-186 163-367 (512)
19 3atr_A Conserved archaeal prot 99.9 2.1E-23 7.2E-28 169.1 9.6 176 1-186 153-353 (453)
20 3cgv_A Geranylgeranyl reductas 99.9 3.7E-21 1.3E-25 152.8 14.9 175 1-186 153-348 (397)
21 3i3l_A Alkylhalidase CMLS; fla 99.8 2E-20 7E-25 155.8 14.9 179 1-185 179-378 (591)
22 3ihm_A Styrene monooxygenase A 99.8 1.6E-19 5.5E-24 145.4 13.6 110 69-185 258-375 (430)
23 2gmh_A Electron transfer flavo 99.8 5.4E-20 1.9E-24 153.3 10.3 80 107-186 340-423 (584)
24 3nix_A Flavoprotein/dehydrogen 99.8 1.4E-18 4.9E-23 139.1 16.2 178 1-186 157-357 (421)
25 2pyx_A Tryptophan halogenase; 99.8 5.8E-19 2E-23 145.5 12.4 170 1-186 224-413 (526)
26 2weu_A Tryptophan 5-halogenase 99.8 2.5E-18 8.5E-23 141.2 10.5 73 109-186 333-405 (511)
27 2aqj_A Tryptophan halogenase, 99.7 2.6E-18 8.9E-23 142.0 7.6 72 109-185 325-396 (538)
28 2e4g_A Tryptophan halogenase; 99.7 3E-17 1E-21 136.0 8.6 73 109-186 356-428 (550)
29 2bry_A NEDD9 interacting prote 99.2 2.9E-12 1E-16 104.9 2.2 66 105-177 384-451 (497)
30 1yvv_A Amine oxidase, flavin-c 98.1 3.6E-05 1.2E-09 59.1 10.7 35 113-153 294-328 (336)
31 3kkj_A Amine oxidase, flavin-c 97.5 6.8E-05 2.3E-09 55.0 4.0 37 112-154 293-329 (336)
32 2gag_B Heterotetrameric sarcos 93.3 0.55 1.9E-05 36.5 9.1 38 113-150 333-374 (405)
33 1ryi_A Glycine oxidase; flavop 92.8 0.58 2E-05 36.1 8.4 38 113-150 319-361 (382)
34 1y56_B Sarcosine oxidase; dehy 84.9 6.5 0.00022 30.1 9.0 24 127-150 331-354 (382)
35 3fpz_A Thiazole biosynthetic e 80.7 0.34 1.2E-05 36.8 0.1 40 113-152 283-324 (326)
36 3nyc_A D-arginine dehydrogenas 74.8 19 0.00065 27.3 8.6 38 113-150 315-357 (381)
37 2qcu_A Aerobic glycerol-3-phos 69.5 42 0.0014 26.9 10.8 40 113-152 332-373 (501)
38 3lov_A Protoporphyrinogen oxid 68.6 4.8 0.00016 32.0 4.0 34 114-153 433-466 (475)
39 3i6d_A Protoporphyrinogen oxid 66.9 4.8 0.00016 31.7 3.6 32 113-150 435-466 (470)
40 3itj_A Thioredoxin reductase 1 66.3 6.8 0.00023 29.2 4.2 37 113-153 299-335 (338)
41 4dgk_A Phytoene dehydrogenase; 65.7 4.3 0.00015 32.5 3.2 35 114-153 458-492 (501)
42 3d1c_A Flavin-containing putat 62.8 9.4 0.00032 28.9 4.5 53 113-168 300-352 (369)
43 4g6h_A Rotenone-insensitive NA 61.6 6.3 0.00022 31.9 3.4 36 113-151 364-399 (502)
44 3qj4_A Renalase; FAD/NAD(P)-bi 61.3 6.9 0.00023 29.5 3.4 32 113-150 309-340 (342)
45 3nks_A Protoporphyrinogen oxid 60.7 8 0.00027 30.6 3.9 32 113-150 441-472 (477)
46 3nrn_A Uncharacterized protein 60.7 7.1 0.00024 30.4 3.5 32 114-148 372-403 (421)
47 3f8d_A Thioredoxin reductase ( 58.2 11 0.00036 27.8 4.0 38 113-152 279-316 (323)
48 2yg5_A Putrescine oxidase; oxi 57.9 11 0.00037 29.6 4.2 36 113-151 415-450 (453)
49 1trb_A Thioredoxin reductase; 57.9 12 0.0004 27.7 4.2 37 113-153 278-314 (320)
50 3cty_A Thioredoxin reductase; 57.0 15 0.0005 27.3 4.6 37 113-153 280-316 (319)
51 2ywl_A Thioredoxin reductase r 56.8 13 0.00046 24.9 4.0 36 112-151 134-169 (180)
52 3dme_A Conserved exported prot 56.5 59 0.002 24.2 8.2 19 1-19 200-220 (369)
53 3fbs_A Oxidoreductase; structu 56.3 9.9 0.00034 27.6 3.5 35 113-152 257-291 (297)
54 2cul_A Glucose-inhibited divis 56.2 13 0.00043 26.5 3.9 34 112-151 197-230 (232)
55 2gqw_A Ferredoxin reductase; f 54.9 7.4 0.00025 30.4 2.7 38 113-150 265-307 (408)
56 1sez_A Protoporphyrinogen oxid 54.5 12 0.00041 29.9 3.9 35 113-153 460-494 (504)
57 3lzw_A Ferredoxin--NADP reduct 52.9 12 0.0004 27.8 3.5 39 113-153 277-315 (332)
58 2e1m_C L-glutamate oxidase; L- 51.1 18 0.0006 24.9 3.8 37 113-153 117-153 (181)
59 3sx6_A Sulfide-quinone reducta 50.5 23 0.00077 27.8 4.9 41 113-153 297-344 (437)
60 3kd9_A Coenzyme A disulfide re 50.3 13 0.00045 29.3 3.5 38 113-150 272-314 (449)
61 3fg2_P Putative rubredoxin red 49.6 7.8 0.00027 30.2 2.0 38 113-150 267-309 (404)
62 1vdc_A NTR, NADPH dependent th 49.5 17 0.00059 27.0 3.9 36 113-152 287-322 (333)
63 1q1r_A Putidaredoxin reductase 49.1 9.8 0.00034 30.0 2.6 38 113-150 276-318 (431)
64 3ka7_A Oxidoreductase; structu 48.9 12 0.00041 29.0 3.0 32 114-148 392-423 (425)
65 3h8l_A NADH oxidase; membrane 48.8 17 0.0006 28.1 4.0 37 113-152 299-335 (409)
66 3klj_A NAD(FAD)-dependent dehy 46.9 15 0.00051 28.5 3.2 37 113-150 257-293 (385)
67 3h28_A Sulfide-quinone reducta 46.8 26 0.0009 27.4 4.7 41 113-153 286-333 (430)
68 2ivd_A PPO, PPOX, protoporphyr 46.7 17 0.00058 28.8 3.6 34 113-152 440-473 (478)
69 2q7v_A Thioredoxin reductase; 46.7 25 0.00085 26.0 4.4 36 113-152 276-311 (325)
70 3ntd_A FAD-dependent pyridine 44.7 17 0.00057 29.6 3.4 38 113-150 295-337 (565)
71 1s3e_A Amine oxidase [flavin-c 44.5 25 0.00085 28.3 4.3 37 114-153 419-455 (520)
72 3r9u_A Thioredoxin reductase; 43.8 23 0.00078 25.9 3.8 36 113-152 276-311 (315)
73 3pvc_A TRNA 5-methylaminomethy 43.8 54 0.0018 27.6 6.4 25 126-150 624-648 (689)
74 4gcm_A TRXR, thioredoxin reduc 43.7 30 0.001 25.5 4.4 36 113-152 270-305 (312)
75 2jae_A L-amino acid oxidase; o 43.7 20 0.00067 28.5 3.6 35 113-151 450-484 (489)
76 2bc0_A NADH oxidase; flavoprot 43.0 18 0.0006 29.0 3.2 38 113-150 318-360 (490)
77 3ps9_A TRNA 5-methylaminomethy 42.8 56 0.0019 27.4 6.3 25 126-150 620-644 (676)
78 3lxd_A FAD-dependent pyridine 42.7 14 0.00048 28.8 2.5 38 113-150 277-320 (415)
79 4a9w_A Monooxygenase; baeyer-v 42.4 33 0.0011 25.5 4.5 37 113-153 314-352 (357)
80 2zbw_A Thioredoxin reductase; 42.3 22 0.00075 26.4 3.5 39 113-153 279-317 (335)
81 3iwa_A FAD-dependent pyridine 41.5 16 0.00056 29.0 2.8 38 113-150 286-328 (472)
82 2cdu_A NADPH oxidase; flavoenz 41.0 13 0.00043 29.5 2.0 38 113-150 274-316 (452)
83 1b37_A Protein (polyamine oxid 40.8 27 0.00093 27.6 4.0 35 114-151 423-457 (472)
84 4a5l_A Thioredoxin reductase; 39.6 38 0.0013 24.8 4.4 35 113-151 276-310 (314)
85 3ef6_A Toluene 1,2-dioxygenase 39.4 18 0.00063 28.1 2.7 37 113-150 267-308 (410)
86 4gut_A Lysine-specific histone 39.0 26 0.0009 30.2 3.8 35 113-150 741-775 (776)
87 2vvm_A Monoamine oxidase N; FA 38.5 34 0.0012 27.2 4.2 38 113-153 449-486 (495)
88 3ics_A Coenzyme A-disulfide re 37.1 27 0.00091 28.7 3.4 38 113-150 310-352 (588)
89 3cgb_A Pyridine nucleotide-dis 36.8 25 0.00086 28.0 3.2 38 113-150 310-352 (480)
90 3lxy_A 4-hydroxythreonine-4-ph 36.8 24 0.00083 27.0 2.9 34 113-151 204-237 (334)
91 1m6i_A Programmed cell death p 35.8 18 0.00062 29.0 2.2 37 114-150 311-351 (493)
92 3vrd_B FCCB subunit, flavocyto 35.5 39 0.0013 25.9 4.0 37 113-152 286-323 (401)
93 1rsg_A FMS1 protein; FAD bindi 35.3 33 0.0011 27.5 3.7 38 112-152 470-507 (516)
94 3hyw_A Sulfide-quinone reducta 35.0 46 0.0016 26.0 4.4 41 113-153 286-333 (430)
95 3ab1_A Ferredoxin--NADP reduct 32.3 39 0.0013 25.4 3.5 39 113-153 290-328 (360)
96 2q0l_A TRXR, thioredoxin reduc 32.2 46 0.0016 24.3 3.8 35 113-151 273-307 (311)
97 2a87_A TRXR, TR, thioredoxin r 30.6 43 0.0015 24.9 3.4 36 113-152 280-315 (335)
98 4eqs_A Coenzyme A disulfide re 30.4 34 0.0011 27.0 2.9 38 113-150 268-310 (437)
99 2iid_A L-amino-acid oxidase; f 29.5 53 0.0018 26.0 4.0 36 113-152 449-484 (498)
100 1fl2_A Alkyl hydroperoxide red 29.3 60 0.0021 23.6 4.0 35 113-151 269-303 (310)
101 3s5w_A L-ornithine 5-monooxyge 28.4 29 0.00099 27.3 2.2 38 114-151 410-447 (463)
102 1nhp_A NADH peroxidase; oxidor 28.3 22 0.00075 28.0 1.5 38 113-150 273-315 (447)
103 2l2d_A OTU domain-containing p 27.8 40 0.0014 18.9 2.0 17 156-172 43-59 (73)
104 2vdc_G Glutamate synthase [NAD 27.7 58 0.002 25.9 3.9 35 113-152 409-443 (456)
105 2z3y_A Lysine-specific histone 27.6 53 0.0018 27.5 3.8 37 114-153 623-659 (662)
106 1yxo_A 4-hydroxythreonine-4-ph 27.6 37 0.0013 26.0 2.5 36 112-152 198-233 (328)
107 3oc4_A Oxidoreductase, pyridin 27.4 14 0.00047 29.3 0.2 37 113-149 271-312 (452)
108 2hi1_A 4-hydroxythreonine-4-ph 27.4 39 0.0013 25.9 2.6 36 112-152 204-239 (330)
109 1ps9_A 2,4-dienoyl-COA reducta 25.0 51 0.0017 27.6 3.2 30 114-147 641-670 (671)
110 1y56_A Hypothetical protein PH 24.5 71 0.0024 25.5 3.9 34 113-152 343-376 (493)
111 3da1_A Glycerol-3-phosphate de 24.0 1.4E+02 0.0049 24.3 5.7 19 1-19 223-242 (561)
112 3tsn_A 4-hydroxythreonine-4-ph 23.8 47 0.0016 25.8 2.5 36 111-151 206-241 (367)
113 4fk1_A Putative thioredoxin re 23.5 52 0.0018 24.1 2.7 36 113-152 264-299 (304)
114 1xhc_A NADH oxidase /nitrite r 23.1 71 0.0024 24.4 3.5 37 113-150 260-296 (367)
115 3l8k_A Dihydrolipoyl dehydroge 23.0 86 0.003 24.7 4.1 33 113-150 300-332 (466)
116 3c4n_A Uncharacterized protein 22.6 48 0.0016 25.6 2.4 21 1-21 227-249 (405)
117 1hyu_A AHPF, alkyl hydroperoxi 21.8 83 0.0029 25.4 3.8 35 113-151 480-514 (521)
118 3urh_A Dihydrolipoyl dehydroge 21.4 94 0.0032 24.7 4.0 33 113-150 330-362 (491)
119 2qae_A Lipoamide, dihydrolipoy 20.4 1E+02 0.0035 24.3 4.0 34 113-150 306-339 (468)
120 3k30_A Histamine dehydrogenase 20.4 64 0.0022 27.1 2.9 35 113-153 641-675 (690)
121 2v3a_A Rubredoxin reductase; a 20.3 76 0.0026 24.2 3.1 37 113-150 269-305 (384)
122 4aty_A Terephthalate 1,2-CIS-d 20.1 63 0.0021 24.8 2.6 35 112-151 219-253 (349)
No 1
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.97 E-value=2.9e-31 Score=211.78 Aligned_cols=114 Identities=21% Similarity=0.292 Sum_probs=96.8
Q ss_pred hhHHHHHHhcCCChHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHH
Q 048694 66 IRSLTLETIKNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLA 145 (193)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La 145 (193)
..+.+.+.+..|.+.++++++..+...+..+..+..++. .+|..|||+|+|||||+|+|+.|||+|+||+||..|+
T Consensus 267 ~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~----~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La 342 (412)
T 4hb9_A 267 LCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHL----LPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLT 342 (412)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCC----CCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCChHHHHHHHhcccceeccchhcccccc----ccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHH
Confidence 345677778899999999998887666666666555443 3789999999999999999999999999999999999
Q ss_pred HHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 048694 146 RCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILL 184 (193)
Q Consensus 146 ~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~ 184 (193)
++|..+..+ ..+++.+|+.||++|++++.+++..|...
T Consensus 343 ~~L~~~~~~-~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~ 380 (412)
T 4hb9_A 343 QKLASVASG-HEELVKAISDYEQQMRAYANEIVGISLRS 380 (412)
T ss_dssp HHHHHHHTT-SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988763 46678999999999999999999988544
No 2
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=1e-29 Score=203.37 Aligned_cols=177 Identities=22% Similarity=0.314 Sum_probs=141.4
Q ss_pred CEEecCCcchHHHhhh-CCC-CCCcCceeEEEEEeeCCCCCCCccceeeEecCCceEEEeecCCcc--------------
Q 048694 1 ILIGCDGASSVVADFL-KLK-PKKAFASCAVRAFTDYPNGHGLPQEIVRMRNDHILCGTIPINDKL-------------- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-------------- 64 (193)
+||+|||.+|.||+.+ |.. .+.+.++..+++.++.+........+..+++++++++++|++++.
T Consensus 172 ~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 251 (407)
T 3rp8_A 172 LLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLA 251 (407)
T ss_dssp EEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCS
T ss_pred EEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCC
Confidence 5899999999999999 765 456677788888877654433345566677888888999988875
Q ss_pred ----chhHHHHHHhcCCChHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHH
Q 048694 65 ----LIRSLTLETIKNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIED 140 (193)
Q Consensus 65 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~d 140 (193)
...+.+.+.+..|.+.+.++++.........+..+...+. ++|..+||+|+|||||.++|+.|||+|+||+|
T Consensus 252 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~d 327 (407)
T 3rp8_A 252 EDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPF----SRLVRGRVALLGDAGHSTTPDIGQGGCAAMED 327 (407)
T ss_dssp CCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCC----SCCEETTEEECGGGTCCCCGGGSCHHHHHHHH
T ss_pred CCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCC----CceecCCEEEEEcccccCCcchhhhHHHHHHH
Confidence 2345677788889988888887765433333444443332 57889999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 141 AVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 141 a~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
|..|+++|... . +.+.+|+.|+++|++++..+++.+..+..
T Consensus 328 a~~La~~L~~~----~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~ 368 (407)
T 3rp8_A 328 AVVLGAVFRQT----R-DIAAALREYEAQRCDRVRDLVLKARKRCD 368 (407)
T ss_dssp HHHHHHHHHSC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999863 2 67899999999999999999999977765
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.95 E-value=7.3e-27 Score=186.39 Aligned_cols=172 Identities=17% Similarity=0.109 Sum_probs=117.0
Q ss_pred CEEecCCcchHHHhhhCCC-CCCcCceeEEEEEeeCCCCCCC-----ccceeeEecCCceEEEeecCCc------c----
Q 048694 1 ILIGCDGASSVVADFLKLK-PKKAFASCAVRAFTDYPNGHGL-----PQEIVRMRNDHILCGTIPINDK------L---- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~------~---- 64 (193)
+||+|||.+|.||++++ + .+.+.++..|++.+......+. ...+.++.+++.++.++|++++ .
T Consensus 144 ~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (397)
T 2vou_A 144 WVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQ 222 (397)
T ss_dssp EEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEE
T ss_pred EEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEE
Confidence 58999999999999998 4 3455566777777653221110 0123344455555555554431 1
Q ss_pred ----------------------------------chhHHHHHHh-cCCChHHHhccccCCCCCceeeeeeeecCcccccc
Q 048694 65 ----------------------------------LIRSLTLETI-KNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLG 109 (193)
Q Consensus 65 ----------------------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (193)
...+.+.+.+ ..|++ +.++++... ....++++.. .++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~-----~~~ 294 (397)
T 2vou_A 223 WYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNAS--SPFVTVVADA-----TVD 294 (397)
T ss_dssp EEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCS--SCEEEEEEEB-----CCS
T ss_pred EEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccC--Ccceeeeeee-----cCC
Confidence 0011122222 24555 666665543 2224444433 234
Q ss_pred cccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 110 RLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 110 ~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
+|..|||+|+|||||.|+|+.|||+|+||+||..|+++|.. ..+.+.+|+.|+++|++++..+++.+..+..
T Consensus 295 ~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~-----~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~ 366 (397)
T 2vou_A 295 RMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK-----NHDLRGSLQSWETRQLQQGHAYLNKVKKMAS 366 (397)
T ss_dssp CSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH-----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999976 3457899999999999999999999876655
No 4
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.94 E-value=3.3e-26 Score=183.33 Aligned_cols=173 Identities=24% Similarity=0.246 Sum_probs=116.5
Q ss_pred CEEecCCcchHHHhhhCCC--CCCcCceeEEEEEeeCCCCCCCccceeeEec--CCceEEEeecCC-----cc-------
Q 048694 1 ILIGCDGASSVVADFLKLK--PKKAFASCAVRAFTDYPNGHGLPQEIVRMRN--DHILCGTIPIND-----KL------- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~-----~~------- 64 (193)
+||||||.+|.||++++.. .+.+.+...+++....+... ......+++ ++.+++++|+.+ +.
T Consensus 160 ~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~ 237 (410)
T 3c96_A 160 VLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL--DGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVC 237 (410)
T ss_dssp EEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT--TSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEEEE
T ss_pred EEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc--CCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEEEE
Confidence 5899999999999999543 24455666677765543221 112223333 355666777753 11
Q ss_pred -------------------chhHHHHHHhcCCCh---HHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEeccc
Q 048694 65 -------------------LIRSLTLETIKNFPA---EKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDS 122 (193)
Q Consensus 65 -------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDA 122 (193)
...+.+.+.+..|.. .+.++++... .+..+++....+ +++|..+||+|+|||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~----~~~~~~grv~LvGDA 311 (410)
T 3c96_A 238 MVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDP----LPHWGRGRITLLGDA 311 (410)
T ss_dssp EEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCC----CSCCCBTTEEECTHH
T ss_pred EecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCC----ccccccCCEEEEecc
Confidence 112334444554432 2334444332 233344433322 347889999999999
Q ss_pred CCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHH-HHHH
Q 048694 123 MHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLI-LLVH 186 (193)
Q Consensus 123 Ah~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~-~~~~ 186 (193)
||.|+|++|||+|+||+||..|+++|... .+.+.+|+.|+++|++++..++..+. .+++
T Consensus 312 Ah~~~P~~GqG~n~ai~Da~~La~~L~~~-----~~~~~~L~~Ye~~r~~~~~~~~~~s~~~~~~ 371 (410)
T 3c96_A 312 AHLMYPMGANGASQAILDGIELAAALARN-----ADVAAALREYEEARRPTANKIILANREREKE 371 (410)
T ss_dssp HHCCCSSTTCTHHHHHHHHHHHHHHHHHC-----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCccchhHHHHHHHHHHHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 99999999999999999999999999873 35788999999999999999998886 3444
No 5
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.94 E-value=1.7e-26 Score=184.34 Aligned_cols=176 Identities=19% Similarity=0.153 Sum_probs=120.7
Q ss_pred CEEecCCcchHHHhhhCCCCCCcCceeEEEEEeeCCCC-CC-C----ccceeeEecCCceEEEeecCCcc----------
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAFASCAVRAFTDYPNG-HG-L----PQEIVRMRNDHILCGTIPINDKL---------- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~~~~~~~~~~~~~p~~~~~---------- 64 (193)
+||+|||.+|.||++++...+.+.+...+++.+..... .+ . ......+++++..++++|..++.
T Consensus 173 ~vV~AdG~~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 252 (398)
T 2xdo_A 173 LVILANGGMSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTP 252 (398)
T ss_dssp EEEECSCTTCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECC
T ss_pred EEEECCCcchhHHhhccCCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecC
Confidence 58999999999999997555566666677766542110 00 0 11122333444333333333321
Q ss_pred ---------------chhHHHHHHhcCCChHHHhccccCCCCCceeeeeeeecCcccccccccC-C--cEEEecccCCCC
Q 048694 65 ---------------LIRSLTLETIKNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQK-G--TVTVAGDSMHVM 126 (193)
Q Consensus 65 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~v~LiGDAAh~~ 126 (193)
...+.+.+.+..|.+.+.++++.. ..+..+..+..+.. .+|.. + ||+|+|||||.|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~rv~LiGDAAh~~ 326 (398)
T 2xdo_A 253 DEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTT--LSFVGLATRIFPLE----KPWKSKRPLPITMIGDAAHLM 326 (398)
T ss_dssp TTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHC--SCCEEEEEEECCCC----SCCCSCCSSCEEECTHHHHCC
T ss_pred cccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCc--ccceeeeeEeccCC----CCcccCCCccEEEEeehhccC
Confidence 123445566778888888888662 24445555444322 35654 5 999999999999
Q ss_pred CCCccchhhhhHHHHHHHHHHHHhccCCChhh-HHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 127 APFIGQGGSAGIEDAVVLARCLARNTMPQYEK-IGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 127 ~P~~g~G~~~al~da~~La~~l~~~~~~~~~~-~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
+|+.|||+|+||+||..|+++|... ..+ .+.+|+.|+++|++++..++..+.....
T Consensus 327 ~P~~GqG~n~ai~Da~~La~~L~~~----~~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~ 383 (398)
T 2xdo_A 327 PPFAGQGVNSGLVDALILSDNLADG----KFNSIEEAVKNYEQQMFIYGKEAQEESTQNEI 383 (398)
T ss_dssp CCTTSCSHHHHHHHHHHHHHHHHSC----CSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCccHHHHHHHHHHHHHHHHhc----cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999874 234 7889999999999999999998866554
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.94 E-value=4.3e-26 Score=186.85 Aligned_cols=180 Identities=21% Similarity=0.137 Sum_probs=116.9
Q ss_pred CEEecCCcchHHHhhhCCCCCCcC-ceeEEEEEeeCCCCCCCccceeeEecCCceEEEeecCCccc-h-----hHHHHHH
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAF-ASCAVRAFTDYPNGHGLPQEIVRMRNDHILCGTIPINDKLL-I-----RSLTLET 73 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~-----~~~~~~~ 73 (193)
+||||||.+|.||+++|.+.+... ....+.+.+..... +.....++.++++++++|++++.. . ...-.+.
T Consensus 157 ~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~ 233 (499)
T 2qa2_A 157 YVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEI---TPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRR 233 (499)
T ss_dssp EEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCC---CCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCC
T ss_pred EEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCC---CcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccc
Confidence 589999999999999987765432 23445555554422 122445567777888899887640 0 0000000
Q ss_pred hcCCC-hHHHhccccC---CCCC-ceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHH
Q 048694 74 IKNFP-AEKLRNGKDC---DLSS-LSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCL 148 (193)
Q Consensus 74 ~~~~~-~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l 148 (193)
..... +.+.+.++.. .... ...|...+ ......+++|..|||+|+|||||.|+|++|||+|+||+||..|+++|
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~L 312 (499)
T 2qa2_A 234 TGPPPYQEVAAAWQRLTGQDISHGEPVWVSAF-GDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKL 312 (499)
T ss_dssp SSSCCHHHHHHHHHHHHSCCCTTCEEEEEEEE-CCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhCCCCCccceeEEEEE-eCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHH
Confidence 00111 2222222211 1010 11121111 12234567889999999999999999999999999999999999999
Q ss_pred HhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 149 ARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 149 ~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
..++. +.+.+.+|+.|+++|++++..++..+..+..
T Consensus 313 a~~l~--g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~ 348 (499)
T 2qa2_A 313 AAVVS--GRAPAGLLDTYHEERHPVGRRLLMNTQAQGM 348 (499)
T ss_dssp HHHHT--TSSCTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 2345788999999999999999988855443
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.94 E-value=3.3e-26 Score=187.57 Aligned_cols=180 Identities=20% Similarity=0.107 Sum_probs=116.9
Q ss_pred CEEecCCcchHHHhhhCCCCCCcC-ceeEEEEEeeCCCCCCCccceeeEecCCceEEEeecCCcc-----ch-hHHHHHH
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAF-ASCAVRAFTDYPNGHGLPQEIVRMRNDHILCGTIPINDKL-----LI-RSLTLET 73 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~-~~~~~~~ 73 (193)
+||||||.+|.||+++|.+.+... ....+.+.+..... +.....++.++++++++|++++. .. ...-.+.
T Consensus 156 ~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~ 232 (500)
T 2qa1_A 156 YLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVEL---QPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRR 232 (500)
T ss_dssp EEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCC---CCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC---
T ss_pred EEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCC---CCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccc
Confidence 589999999999999987765433 33455555554422 12244556777788889988764 00 0000000
Q ss_pred hcCC-ChHHHhccccC---CCCC-ceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHH
Q 048694 74 IKNF-PAEKLRNGKDC---DLSS-LSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCL 148 (193)
Q Consensus 74 ~~~~-~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l 148 (193)
.... .+.+.+.++.. .... ...|...+ ......+++|..|||+|+|||||.++|++|||+|+||+||..|+++|
T Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~L 311 (500)
T 2qa1_A 233 ETPPSWHEVADAWKRLTGDDIAHAEPVWVSAF-GNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKL 311 (500)
T ss_dssp --CCCHHHHHHHHHHHHSCCCTTSEEEEEEEE-ECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCCCCccceeEEEEe-ccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHH
Confidence 0111 12222222211 1010 11121111 11234567888999999999999999999999999999999999999
Q ss_pred HhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 149 ARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 149 ~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
..+++ +.+.+.+|+.|+++|++++..++..+..+..
T Consensus 312 a~~~~--g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~ 347 (500)
T 2qa1_A 312 GAVVN--GTATEELLDSYHSERHAVGKRLLMNTQAQGL 347 (500)
T ss_dssp HHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 3346789999999999999999988855443
No 8
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.94 E-value=3.7e-27 Score=186.98 Aligned_cols=174 Identities=18% Similarity=0.122 Sum_probs=119.0
Q ss_pred CEEecCCcchHHHhhhCCC-CCCcCceeEEEEEeeCCC---CCCCcc-ceee--EecCCceEEEeecCCcc-------ch
Q 048694 1 ILIGCDGASSVVADFLKLK-PKKAFASCAVRAFTDYPN---GHGLPQ-EIVR--MRNDHILCGTIPINDKL-------LI 66 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~-~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~--~~~~~~~~~~~p~~~~~-------~~ 66 (193)
+||+|||.+|.+|+.++.. .+.+.++.++++.++... ...... .... +++++++++++|++++. ..
T Consensus 151 ~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 230 (379)
T 3alj_A 151 LIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPA 230 (379)
T ss_dssp EEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECT
T ss_pred EEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecC
Confidence 5899999999999999653 234556677777766531 111111 2222 56778888899998875 10
Q ss_pred ----hHHHHHHhcCCChHHH---hccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHH
Q 048694 67 ----RSLTLETIKNFPAEKL---RNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIE 139 (193)
Q Consensus 67 ----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~ 139 (193)
.+.+.+.+..|.+.+. ++++..++..+..++++... ..++|..+||+|+|||||.++|+.|||+|+||+
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~ 306 (379)
T 3alj_A 231 ADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETT----KLDSWTRGKVALVGDAAHAMCPALAQGAGCAMV 306 (379)
T ss_dssp TCTTTTCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEE----EESCSEETTEEECTHHHHCCCGGGSCHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCchhccHHHHHhhCCccceEEecccccC----CCCCcccCcEEEEEcccCCCCcchhhhHHHHHH
Confidence 1122222222222232 44443322233444544422 234788899999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHH
Q 048694 140 DAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLIL 183 (193)
Q Consensus 140 da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~ 183 (193)
||..|+++|.. ..+.+.+|+.|+++|++++..++..+..
T Consensus 307 da~~La~~L~~-----~~~~~~~l~~Y~~~r~~~~~~~~~~s~~ 345 (379)
T 3alj_A 307 NAFSLSQDLEE-----GSSVEDALVAWETRIRPITDRCQALSGD 345 (379)
T ss_dssp HHHHHHHHTTS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc-----ccCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999976 2356889999999999999999999843
No 9
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.93 E-value=6.9e-26 Score=180.70 Aligned_cols=176 Identities=20% Similarity=0.111 Sum_probs=123.0
Q ss_pred CEEecCCcchHHHhhhCCCC-CC--cCce--eEEEEEeeCCCCCCCccceeeEecC-CceEEEeecCCcc----------
Q 048694 1 ILIGCDGASSVVADFLKLKP-KK--AFAS--CAVRAFTDYPNGHGLPQEIVRMRND-HILCGTIPINDKL---------- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~-~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~---------- 64 (193)
+||+|||.+|.||+.+|... +. +.+. .++++.++...+ ... .++.+ +++++++|++++.
T Consensus 157 ~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 231 (399)
T 2x3n_A 157 VVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAE----RNR-LYVDSQGGLAYFYPIGFDRARLVVSFPRE 231 (399)
T ss_dssp EEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHH----CEE-EEECTTSCEEEEEEETTTEEEEEEECCHH
T ss_pred EEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCC----Ccc-EEEcCCCcEEEEEEcCCCEEEEEEEeCcc
Confidence 58999999999999997653 33 4455 666665443211 113 56677 7788888887743
Q ss_pred --------chhHHHHHHhcCCChHHH-hccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhh
Q 048694 65 --------LIRSLTLETIKNFPAEKL-RNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGS 135 (193)
Q Consensus 65 --------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~ 135 (193)
...+.+.+.+..|.+.+. ..++.........+++... ...++|..+||+|+|||||.++|++|||+|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~ 307 (399)
T 2x3n_A 232 EARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGY----LNLDRYWADNVAMLGDAIHNVHPITGQGMN 307 (399)
T ss_dssp HHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCC----EECSCSEETTEEECGGGTEECCGGGCCHHH
T ss_pred ccccccccCCHHHHHHHHhhcCCcchhhHHhcCCccceEEechhhc----ccccccccCcEEEEechhccCCCcccccHH
Confidence 012344455556655552 2233322112233343321 234578899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 136 AGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 136 ~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
+||+||..|+++|...... +.+++.+|+.|+++|++++..++..+..+..
T Consensus 308 ~al~da~~La~~L~~~~~~-~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~ 357 (399)
T 2x3n_A 308 LAIEDASALADALDLALRD-ACALEDALAGYQAERFPVNQAIVSYGHALAT 357 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcc-cchHHHHHHHHHHHhccHHHHHHHHHHHhhh
Confidence 9999999999999887542 2356889999999999999999999877665
No 10
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.93 E-value=3e-26 Score=193.35 Aligned_cols=181 Identities=17% Similarity=0.140 Sum_probs=112.9
Q ss_pred CEEecCCcchHHHhhhCCCCCCcCceeEEEEEeeCC--CCCCC-ccceeeEecCCceEEEeecCCcc-----chhHHH--
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAFASCAVRAFTDYP--NGHGL-PQEIVRMRNDHILCGTIPINDKL-----LIRSLT-- 70 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~-- 70 (193)
+||||||++|.||+++|.+.+.......| ++++.. ...+. ......+..+.++++++|+.++. ......
T Consensus 221 ~VVGADG~~S~VR~~lg~~~~g~~~~~~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~ 299 (665)
T 1pn0_A 221 YVIGCDGGHSWVRRTLGFEMIGEQTDYIW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEK 299 (665)
T ss_dssp EEEECCCTTCHHHHHHTCCCEEEEEEEEE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----
T ss_pred EEEeccCCCCHHHHhcCCCCCCCCccEEE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCcccc
Confidence 58999999999999998765543322222 333321 11111 11222223356777889988774 000000
Q ss_pred --HHHhcCCC-hHHHhcc----ccCCC--CCceeeeeeeecCccccccccc-CCcEEEecccCCCCCCCccchhhhhHHH
Q 048694 71 --LETIKNFP-AEKLRNG----KDCDL--SSLSFTHFRYRAPWDILLGRLQ-KGTVTVAGDSMHVMAPFIGQGGSAGIED 140 (193)
Q Consensus 71 --~~~~~~~~-~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~v~LiGDAAh~~~P~~g~G~~~al~d 140 (193)
........ +.+.+.+ ..... ..+.++..+. .....+++|. .+||+|+|||||.++|++|||+|+||+|
T Consensus 300 ~~~~~~~~~t~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~D 377 (665)
T 1pn0_A 300 GGRVDRTKFTPEVVIANAKKIFHPYTFDVQQLDWFTAYH--IGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMD 377 (665)
T ss_dssp ------CCCCHHHHHHHHHHHHTTSCCEEEEEEEEEEEE--EEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHH
T ss_pred ccccCcCCCCHHHHHHHHHHHhCcccCceeeEEEEEeee--ccceehhhcccCCCEEEEECccccCCCcccCCcchhHHH
Confidence 00011111 2222222 11110 1122222221 1133566888 7999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 141 AVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 141 a~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
|+.|++.|..++++ .+.+.+|+.|+++|++++..++..+..+..
T Consensus 378 A~nLawkLa~vl~g--~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~ 421 (665)
T 1pn0_A 378 TYNLGWKLGLVLTG--RAKRDILKTYEEERQPFAQALIDFDHQFSR 421 (665)
T ss_dssp HHHHHHHHHHHHTT--CBCGGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988763 345678999999999999999998866655
No 11
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.93 E-value=2.7e-25 Score=176.42 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=67.8
Q ss_pred cccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 108 LGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 108 ~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
+++|..+||+|+|||||+|+|+.|||+|+||+||..|+++|... .+.+.+|+.|+++|++++..++..+..+..
T Consensus 256 ~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~-----~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~ 329 (381)
T 3c4a_A 256 HDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE-----DGVPAALKRFEERALPLVQLFRGHADNSRV 329 (381)
T ss_dssp CSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS-----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 35788999999999999999999999999999999999999873 357889999999999999999999977765
No 12
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.92 E-value=2.8e-25 Score=184.02 Aligned_cols=182 Identities=18% Similarity=0.126 Sum_probs=109.5
Q ss_pred CEEecCCcchHHHhhhCCCCCCcC-ceeEEEEEeeCCCCC---CCcc-ceeeEecCC-ceEEEeecCCccchh----HHH
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAF-ASCAVRAFTDYPNGH---GLPQ-EIVRMRNDH-ILCGTIPINDKLLIR----SLT 70 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~-~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~-~~~~~~p~~~~~~~~----~~~ 70 (193)
+||||||.+|.||+++|.+.+... ....+...+..+... .... ....++.++ ..++++|++++.... ...
T Consensus 187 ~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~ 266 (549)
T 2r0c_A 187 YLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGLYRLTVGVDD 266 (549)
T ss_dssp EEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSEEEEEEECST
T ss_pred EEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcEEEEEecCCC
Confidence 489999999999999987655433 223344444443110 0011 223333555 667788886543100 000
Q ss_pred HH-HhcCCChHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHH
Q 048694 71 LE-TIKNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLA 149 (193)
Q Consensus 71 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~ 149 (193)
.. ..+.+.+.+++++.......+ .+...+. .....+++|..|||+|+|||||.++|++|||+|+||+||..|+++|.
T Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~-~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La 344 (549)
T 2r0c_A 267 ASKSTMDSFELVRRAVAFDTEIEV-LSDSEWH-LTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLA 344 (549)
T ss_dssp TCCSCCCHHHHHHHHBCSCCCCEE-EEEEEEE-ECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCCCceeE-EEEecch-hHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHH
Confidence 00 001111233333332110011 1111111 12345678889999999999999999999999999999999999998
Q ss_pred hccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 150 RNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 150 ~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
.+++ +.+.+.+|+.|+++|++++..+++.+.....
T Consensus 345 ~~l~--g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~ 379 (549)
T 2r0c_A 345 ATLR--GWAGPGLLATYEEERRPVAITSLEEANVNLR 379 (549)
T ss_dssp HHHH--TCSCTTTTHHHHHHHHHHHHHHHHC------
T ss_pred HHHc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8764 2334678999999999999999998865554
No 13
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.91 E-value=1.7e-24 Score=179.81 Aligned_cols=180 Identities=22% Similarity=0.132 Sum_probs=109.1
Q ss_pred CEEecCCcchHHHhhhCCCCCCcC-ceeEEEEEeeCCCCCCCccceeeEecCCceEEE-eecCCccc-hh------HHHH
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAF-ASCAVRAFTDYPNGHGLPQEIVRMRNDHILCGT-IPINDKLL-IR------SLTL 71 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~------~~~~ 71 (193)
+||+|||.+|.||+++|...+... ....+...+...... ..+.....+.+++++ +|++++.. .. ....
T Consensus 198 ~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~ 274 (570)
T 3fmw_A 198 YGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPA 274 (570)
T ss_dssp EEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEESCC--
T ss_pred EEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCcc
Confidence 589999999999999988765443 334444444333221 111112233344444 56665521 00 0000
Q ss_pred HHhcCC-ChHHHhccccCCCC-----CceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHH
Q 048694 72 ETIKNF-PAEKLRNGKDCDLS-----SLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLA 145 (193)
Q Consensus 72 ~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La 145 (193)
+..... .+.+.+.++..... ....|...+ +.....+++|..+||+|+|||||.++|++|||+|+||+||..|+
T Consensus 275 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La 353 (570)
T 3fmw_A 275 ADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRF-GDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLG 353 (570)
T ss_dssp ---CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEE-CCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHhhcccccceeeeeeEEe-ecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHH
Confidence 000111 12233333222111 111022222 22234567899999999999999999999999999999999999
Q ss_pred HHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 146 RCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 146 ~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
++|..++. +.+.+.+|+.|+++|++++..++..+..+..
T Consensus 354 ~~La~~~~--g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~ 392 (570)
T 3fmw_A 354 WKLAARVR--GWGSEELLDTYHDERHPVAERVLLNTRAQLA 392 (570)
T ss_dssp HHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988764 2346788999999999999999999876654
No 14
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.91 E-value=1e-24 Score=180.09 Aligned_cols=183 Identities=18% Similarity=0.098 Sum_probs=113.0
Q ss_pred CEEecCCcchHHHhhhCCCCCCcCcee-EEEEEeeCC--CCCCCccc-eeeEecCCceEEEeecCCccc------hhHHH
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAFASC-AVRAFTDYP--NGHGLPQE-IVRMRNDHILCGTIPINDKLL------IRSLT 70 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~~~~-~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~------~~~~~ 70 (193)
+||+|||.+|.||+++|.+.+...... .+...+... ........ ...+..++...+++|+.++.. .....
T Consensus 174 ~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~ 253 (535)
T 3ihg_A 174 YLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDRHTLFVEYDPDE 253 (535)
T ss_dssp EEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTEEEEEEEECTTT
T ss_pred EEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCCCEEEEEEeeCccc
Confidence 589999999999999987654332211 111222221 11111112 233345666677778876430 00000
Q ss_pred HHHhcCCC-----hHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHH
Q 048694 71 LETIKNFP-----AEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLA 145 (193)
Q Consensus 71 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La 145 (193)
.+....+. +.+++.+..... .+........+.....+++|..|||+|+|||||.++|++|||+|+||+||..|+
T Consensus 254 ~~~~~~~~~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La 332 (535)
T 3ihg_A 254 GERPEDFTPQRCVELIGLALDAPEV-KPELVDIQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLA 332 (535)
T ss_dssp TCCGGGCCHHHHHHHHHHHHTCSSC-CCEEEEEEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHHHHhCCCCC-ceeEEEeeEeeeeEEEECccccCCEEEEecccccCCCccCCccccccccHHHHH
Confidence 00011111 123333322111 111111111111233466899999999999999999999999999999999999
Q ss_pred HHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 146 RCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 146 ~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
++|..+++ +.+.+.+|+.|+++|++++..++..|...+.
T Consensus 333 ~~La~~l~--g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~ 371 (535)
T 3ihg_A 333 WKLAAVLQ--GQAGAGLLDTYEDERKVAAELVVAEALAIYA 371 (535)
T ss_dssp HHHHHHHT--TSSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc--CCCcHHHHHhhHHHHHHHHHHHHHHHHHhhH
Confidence 99998875 3345678999999999999999999987765
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.90 E-value=3.9e-24 Score=179.94 Aligned_cols=178 Identities=18% Similarity=0.140 Sum_probs=107.7
Q ss_pred CEEecCCcchHHHhhhCCCCCCcCceeEEEEEeeC---CCCCCCccceeeEecCCceEEEeecCCc-c-----chhH---
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAFASCAVRAFTDY---PNGHGLPQEIVRMRNDHILCGTIPINDK-L-----LIRS--- 68 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~-----~~~~--- 68 (193)
+||||||.+|.||+++|...+.......| +.++. .............. ++++++++|+.++ . ....
T Consensus 202 ~vVgADG~~S~vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~-~~g~~~~~P~~~~~~~r~~~~~~~~~~ 279 (639)
T 2dkh_A 202 YVVGCDGARSNVRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQS-EQGNVLIIPREGGHLVRFYVEMDKLDA 279 (639)
T ss_dssp EEEECCCTTCHHHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEE-TTEEEEEEECTTSSCEEEEEECC----
T ss_pred EEEECCCcchHHHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEc-CCceEEEEEcCCCcEEEEEEECCCcCc
Confidence 48999999999999998765433322222 22211 11111111222222 6677888998877 2 1000
Q ss_pred HHHHHhcCCC-hHHHhccccC-CC-----CCceeeeeeeecCccccccccc------------CCcEEEecccCCCCCCC
Q 048694 69 LTLETIKNFP-AEKLRNGKDC-DL-----SSLSFTHFRYRAPWDILLGRLQ------------KGTVTVAGDSMHVMAPF 129 (193)
Q Consensus 69 ~~~~~~~~~~-~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~------------~~~v~LiGDAAh~~~P~ 129 (193)
.-........ +.+.+.++.. .+ ..+.++..+. .....+++|. .+||+|+|||||.++|+
T Consensus 280 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~ 357 (639)
T 2dkh_A 280 DERVASRNITVEQLIATAQRVLHPYKLEVKNVPWWSVYE--IGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPK 357 (639)
T ss_dssp -------CCCHHHHHHHHHHHHTTSCEEEEEEEEEEEEC--CCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGG
T ss_pred ccccccCCCCHHHHHHHHHHHhCcccCcceeeeEEEecc--cccchhhhhhccccccccccCccCcEEEEecccccCCCc
Confidence 0000011111 2222222111 11 1122222211 1123445666 89999999999999999
Q ss_pred ccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 048694 130 IGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILL 184 (193)
Q Consensus 130 ~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~ 184 (193)
+|||+|+||+||..|++.|..++++ .+.+.+|+.|+++|++++..+++.+..+
T Consensus 358 ~GqG~n~ai~DA~nLawkLa~vl~g--~a~~~lL~~Ye~eR~~~a~~~~~~s~~~ 410 (639)
T 2dkh_A 358 AGQGMNFSMQDSFNLGWKLAAVLRK--QCAPELLHTYSSERQVVAQQLIDFDREW 410 (639)
T ss_dssp GCCTTHHHHHHHHHHHHHHHHHHTT--SBCGGGGHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccchhhHHHHHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988763 3456789999999999999999987543
No 16
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.90 E-value=1e-23 Score=167.09 Aligned_cols=173 Identities=12% Similarity=0.048 Sum_probs=102.7
Q ss_pred CEEecCCcchHHHhhhCCCCCCcC--ceeEEEEEeeCCCCCCCccceeeEe---cCCceEEEeecCCcc-----------
Q 048694 1 ILIGCDGASSVVADFLKLKPKKAF--ASCAVRAFTDYPNGHGLPQEIVRMR---NDHILCGTIPINDKL----------- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~----------- 64 (193)
+||||||.+|.||+++|...+... ....... .........+.....++ .++++++++|.+++.
T Consensus 153 ~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~ 231 (397)
T 3oz2_A 153 MVIAADGFESEFGRWAGLKSVILARNDIISALQ-YRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINW 231 (397)
T ss_dssp EEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEE-EEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEeCCccccHHHHHcCCCcccccceeeeeeEE-EEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccch
Confidence 589999999999999976543222 2222111 11111111122233333 456777888887764
Q ss_pred -chhHHHHH---HhcCCChHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHH
Q 048694 65 -LIRSLTLE---TIKNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIED 140 (193)
Q Consensus 65 -~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~d 140 (193)
.......+ .+....+.+.+. . .+. ......+......+|..+||+|+|||||.++|++|||+|+||+|
T Consensus 232 ~~~~~~~~~~l~~~~~~~~~l~~~----~--~~~--~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~ 303 (397)
T 3oz2_A 232 IHNRFELKNYLDRFIENHPGLKKG----Q--DIQ--LVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVS 303 (397)
T ss_dssp SCSHHHHHHHHHHHHHTCHHHHTS----E--EEE--EEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHhCcccccc----c--eee--eeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHH
Confidence 11111111 111112222211 1 111 11111122222335678999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHH
Q 048694 141 AVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLIL 183 (193)
Q Consensus 141 a~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~ 183 (193)
|..||+.|.++++. .+..+.+|+.|++.++++..+.......
T Consensus 304 g~~~A~~i~~~l~~-~~~~~~~L~~Ye~~~~~~~~~~~~~~~~ 345 (397)
T 3oz2_A 304 GMYAAQVTKEAIES-NDYSPQMMQKYEKLIKERFERKHLRNWV 345 (397)
T ss_dssp HHHHHHHHHHHHHH-TCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887752 2334788999999988877665555433
No 17
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.90 E-value=9.8e-24 Score=167.92 Aligned_cols=74 Identities=24% Similarity=0.286 Sum_probs=64.3
Q ss_pred cccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 048694 108 LGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILL 184 (193)
Q Consensus 108 ~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~ 184 (193)
.++|..+||+|+|||||.|+|+.|||+|+||+||..|+++|..... .+.+.+|+.|+++|++++..+++.+..+
T Consensus 273 ~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~---~~~~~~L~~Y~~~r~~~~~~~~~~s~~~ 346 (394)
T 1k0i_A 273 VEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYR---EGRGELLERYSAICLRRIWKAERFSWWM 346 (394)
T ss_dssp EECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHH---HCCGGGGGGHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhc---cCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999999999999987542 1235689999999999999999887553
No 18
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.89 E-value=1.4e-22 Score=166.62 Aligned_cols=185 Identities=12% Similarity=0.129 Sum_probs=124.8
Q ss_pred CEEecCCcchHHHhhhCCCC-CCcCceeEEEEEeeCCCC--CCCccceeeEecCCceEEEeecCCcc-------------
Q 048694 1 ILIGCDGASSVVADFLKLKP-KKAFASCAVRAFTDYPNG--HGLPQEIVRMRNDHILCGTIPINDKL------------- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~------------- 64 (193)
+||+|||.+|.+|+++|... ..+....++.+++..... .+........+.++++++++|++++.
T Consensus 163 ~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~ 242 (512)
T 3e1t_A 163 FIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAE 242 (512)
T ss_dssp EEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHT
T ss_pred EEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhh
Confidence 58999999999999996542 233455666666653321 11222334445567788999999875
Q ss_pred ---chhHHHHHHhcCCChHHHhccccCCCC-CceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHH
Q 048694 65 ---LIRSLTLETIKNFPAEKLRNGKDCDLS-SLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIED 140 (193)
Q Consensus 65 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~d 140 (193)
...+...+.+..+.+.+.+++...... ......+..........++|..+||+|||||||+++|+.|||+|+|++|
T Consensus 243 ~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~d 322 (512)
T 3e1t_A 243 AIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYS 322 (512)
T ss_dssp TTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHH
Confidence 012223333334555566655443210 1111111111122223446778999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 141 AVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 141 a~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
|..|++.|...+.+ ..+.+.+|+.|++.|+++...+.+....+|+
T Consensus 323 A~~La~~L~~~l~~-~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~ 367 (512)
T 3e1t_A 323 ALLVARAINTCLAG-EMSEQRCFEEFERRYRREYGNFYQFLVAFYD 367 (512)
T ss_dssp HHHHHHHHHHHTTT-CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999987753 4567889999999999999999998877665
No 19
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.89 E-value=2.1e-23 Score=169.09 Aligned_cols=176 Identities=12% Similarity=0.017 Sum_probs=112.2
Q ss_pred CEEecCCcchHHHhhhCCCCC----Cc--CceeEEEEEeeCCCCCCCccceeeEec----CCceEEEeecCCccc-----
Q 048694 1 ILIGCDGASSVVADFLKLKPK----KA--FASCAVRAFTDYPNGHGLPQEIVRMRN----DHILCGTIPINDKLL----- 65 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~----- 65 (193)
+||+|||.+|.+|+.++...+ .+ ....+++..+..............+++ ++++++++|.+++..
T Consensus 153 ~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~ 232 (453)
T 3atr_A 153 VVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLG 232 (453)
T ss_dssp EEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEE
T ss_pred EEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEE
Confidence 589999999999999976532 11 234566665554432211222334443 567888999887640
Q ss_pred ---------hhHHHHHHhcCCChHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhh
Q 048694 66 ---------IRSLTLETIKNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSA 136 (193)
Q Consensus 66 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~ 136 (193)
..+.+.+.++.+.+ .+.... -+..+ ....|.....++|..+|++|+|||||+++|++|||+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~--~~~~~--~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~ 304 (453)
T 3atr_A 233 IQGGMGYPSIHEYYKKYLDKYAP----DVDKSK--LLVKG--GALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGS 304 (453)
T ss_dssp EESSSCCCCHHHHHHHHHHHHCT----TEEEEE--EEEEE--EEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHH
T ss_pred ecCCCCCCCHHHHHHHHHHhhhh----hcCCCe--EEecc--ceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHH
Confidence 11222222211111 111100 00011 11112233456788999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhccCCChhhH-HHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 137 GIEDAVVLARCLARNTMPQYEKI-GEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 137 al~da~~La~~l~~~~~~~~~~~-~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
||+||..|+++|.+++. ..+. +++|+.|+++|++++...+..+..+.+
T Consensus 305 Ai~da~~la~~l~~~l~--~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~ 353 (453)
T 3atr_A 305 AMISGYCAAKAILSAFE--TGDFSASGLWDMNICYVNEYGAKQASLDIFRR 353 (453)
T ss_dssp HHHHHHHHHHHHHHHHH--HTCCSTTTTTHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987653 1122 568999999999999999887765555
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.87 E-value=3.7e-21 Score=152.81 Aligned_cols=175 Identities=13% Similarity=0.061 Sum_probs=110.0
Q ss_pred CEEecCCcchHHHhhhCCCC-CCcC--ceeEEEEEeeCCCCCCCccceeeEe---cCCceEEEeecCCcc---------c
Q 048694 1 ILIGCDGASSVVADFLKLKP-KKAF--ASCAVRAFTDYPNGHGLPQEIVRMR---NDHILCGTIPINDKL---------L 65 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~---------~ 65 (193)
+||+|||.+|.+|+.+|... +... ....+...+...... +.....++ .++++++++|.+++. .
T Consensus 153 ~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~ 230 (397)
T 3cgv_A 153 MVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD--PDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSIN 230 (397)
T ss_dssp EEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC--TTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETT
T ss_pred EEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC--CCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccc
Confidence 58999999999999997665 3211 112233323222211 23334443 467788899988865 0
Q ss_pred h---hHHHHHHhc---CCChHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHH
Q 048694 66 I---RSLTLETIK---NFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIE 139 (193)
Q Consensus 66 ~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~ 139 (193)
. .....+.++ ...+.+. ... ....+ ....|.....++|..+|++|+|||||.++|++|+|+|+|++
T Consensus 231 ~~~~~~~~~~~l~~~~~~~~~~~----~~~--~~~~~--~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~ 302 (397)
T 3cgv_A 231 WIHNRFELKNYLDRFIENHPGLK----KGQ--DIQLV--TGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIV 302 (397)
T ss_dssp TCSCHHHHHHHHHHHHHTCHHHH----TSE--EEEEE--EEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHH
T ss_pred cccCCCCHHHHHHHHHHhCcCCC----CCe--EEeee--eeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHH
Confidence 0 011111111 1112111 111 01111 11122223355788899999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 140 DAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 140 da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
||..|++.|.+.+.. ....+.+|+.|+++|+++..+.+..+..+.+
T Consensus 303 ~a~~la~~l~~~~~~-~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 3cgv_A 303 SGMYAAQVTKEAIES-NDYSPQMMQKYEKLIKERFERKHLRNWVAKE 348 (397)
T ss_dssp HHHHHHHHHHHHHHH-TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999876531 2334678999999999999888888866555
No 21
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.85 E-value=2e-20 Score=155.79 Aligned_cols=179 Identities=15% Similarity=0.144 Sum_probs=119.6
Q ss_pred CEEecCCcchHHHhhhCCCCCCc-CceeEEEEEeeCCC--CCCCccceeeEecCCceEEEeecCCcc---------c---
Q 048694 1 ILIGCDGASSVVADFLKLKPKKA-FASCAVRAFTDYPN--GHGLPQEIVRMRNDHILCGTIPINDKL---------L--- 65 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~---------~--- 65 (193)
+||+|||.+|.+|+.++...... ....++...+.... ..+..........+.++++++|++++. .
T Consensus 179 lVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~ 258 (591)
T 3i3l_A 179 FVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSA 258 (591)
T ss_dssp EEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHH
T ss_pred EEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHh
Confidence 58999999999999997653221 11223333333221 122223344445677788899998775 1
Q ss_pred -----hhHHHHHHhcCCChHHHhccccCCC-CCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHH
Q 048694 66 -----IRSLTLETIKNFPAEKLRNGKDCDL-SSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIE 139 (193)
Q Consensus 66 -----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~ 139 (193)
..+.+.+.+....+.+.+.+..... ......+. +.....+|..+|++|+|||||.++|+.|||+|+|++
T Consensus 259 ~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~ 333 (591)
T 3i3l_A 259 EVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQD-----WSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQ 333 (591)
T ss_dssp HHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEE-----EEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHH
T ss_pred hhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEecc-----cccchhhcccCCEEEEccccccCCCcccccHHHHHH
Confidence 1122333333445555555544321 11111111 112234677899999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 048694 140 DAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLV 185 (193)
Q Consensus 140 da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~ 185 (193)
||..|+++|...+.. ....+.+++.|++.++++...+++....+|
T Consensus 334 dA~~LA~~L~~~l~~-~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 334 SAVSAAAAIDRITRH-GDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887642 455678899999999999999999998877
No 22
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.82 E-value=1.6e-19 Score=145.42 Aligned_cols=110 Identities=16% Similarity=0.145 Sum_probs=79.9
Q ss_pred HHHHHhcCCChHHHhccccCC------CCCceeeeeeeecCcccccccccCCcEEE-ecccCCCCCCCccchhhhhHHHH
Q 048694 69 LTLETIKNFPAEKLRNGKDCD------LSSLSFTHFRYRAPWDILLGRLQKGTVTV-AGDSMHVMAPFIGQGGSAGIEDA 141 (193)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~L-iGDAAh~~~P~~g~G~~~al~da 141 (193)
.+.+.+..+.+.+.+++.... +..+.. ....+.......+|..+|++| +|||||.++|+.|||+|+||+||
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da 335 (430)
T 3ihm_A 258 LMLEKLGKHHPSVAERIDPAEFDLANSSLDILQ--GGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAA 335 (430)
T ss_dssp HHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEE--ECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHhCccHHHHHhhchhccccCccceee--cceeecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHH
Confidence 566667777888888877655 222111 011111122345788999998 99999999999999999999999
Q ss_pred HHHHHHHHhccCCChhhHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Q 048694 142 VVLARCLARNTMPQYEKIGEALDEYVKERR-TRLLDWLLKLILLV 185 (193)
Q Consensus 142 ~~La~~l~~~~~~~~~~~~~~l~~y~~~r~-~~~~~~~~~s~~~~ 185 (193)
..|+++|... .+.+++|..|+.+|+ +++....+.+..+.
T Consensus 336 ~~l~~~l~~~-----~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 375 (430)
T 3ihm_A 336 WILGEEILAH-----SVYDLRFSEHLERRRQDRVLCATRWTNFTL 375 (430)
T ss_dssp HHHHHHHHHC-----SCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999884 346789999999988 77777666555443
No 23
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.81 E-value=5.4e-20 Score=153.27 Aligned_cols=80 Identities=11% Similarity=0.053 Sum_probs=63.6
Q ss_pred ccccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHH---HHHHHHHHHHh-HHHHHHHHH
Q 048694 107 LLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEA---LDEYVKERRTR-LLDWLLKLI 182 (193)
Q Consensus 107 ~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~---l~~y~~~r~~~-~~~~~~~s~ 182 (193)
.+++|..+|++|+|||||.++|+.|||+|+||+||..||+.|..++..+....+.+ |+.|+++|+++ +.+.+..+.
T Consensus 340 ~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r 419 (584)
T 2gmh_A 340 SIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVR 419 (584)
T ss_dssp GCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTT
T ss_pred cCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHHHHh
Confidence 34678899999999999999999999999999999999999988764211022443 89999999988 677776665
Q ss_pred HHHH
Q 048694 183 LLVH 186 (193)
Q Consensus 183 ~~~~ 186 (193)
.+..
T Consensus 420 ~~~~ 423 (584)
T 2gmh_A 420 NIRP 423 (584)
T ss_dssp TTTG
T ss_pred ChhH
Confidence 4443
No 24
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.80 E-value=1.4e-18 Score=139.07 Aligned_cols=178 Identities=8% Similarity=0.029 Sum_probs=107.4
Q ss_pred CEEecCCcchHHHhhhCCCCCC-cCceeEEEEEeeCCCCC-CC-ccceeeEe---cCCceEEEeecCCcc----------
Q 048694 1 ILIGCDGASSVVADFLKLKPKK-AFASCAVRAFTDYPNGH-GL-PQEIVRMR---NDHILCGTIPINDKL---------- 64 (193)
Q Consensus 1 lvVgADG~~S~vR~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~~~~~p~~~~~---------- 64 (193)
+||+|||.+|.+|+.+|...+. ......+...+...... .. ......++ .+.++++++|.+++.
T Consensus 157 ~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~ 236 (421)
T 3nix_A 157 FIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPS 236 (421)
T ss_dssp EEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHH
T ss_pred EEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHH
Confidence 5899999999999999765433 22334444444332211 11 12222222 356788899998875
Q ss_pred ------chhHHHHHHhcCCChHHHhccccCCCC-CceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhh
Q 048694 65 ------LIRSLTLETIKNFPAEKLRNGKDCDLS-SLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAG 137 (193)
Q Consensus 65 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~a 137 (193)
...+.+.+.+....+.+.+.+...... ....++. ......+|..+|++|+|||||.++|+.|+|+|+|
T Consensus 237 ~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A 311 (421)
T 3nix_A 237 YFDEYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEG-----YAISASKLYGDGFVLTGNATEFLDPIFSSGATFA 311 (421)
T ss_dssp HHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEEC-----CCBEESCSEETTEEECGGGTCBCCSTTCCHHHHH
T ss_pred HhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecc-----cceeeeeeccCCEEEecccccccCCcccccHHHH
Confidence 112222333333334444444443321 1222222 2222346778999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 138 IEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 138 l~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
++||..|++.|.+.+.+... ..++.|++.++............++.
T Consensus 312 ~~~a~~la~~l~~~~~~~~~---~~~~~y~~~~~~~~~~~~~~~~~~~~ 357 (421)
T 3nix_A 312 MESGSKGGKLAVQFLKGEEV---NWEKDFVEHMMQGIDTFRSFVTGWYD 357 (421)
T ss_dssp HHHHHHHHHHHHHHHTTCCC---CHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCch---hHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999887653221 24667888877666655554444433
No 25
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.79 E-value=5.8e-19 Score=145.53 Aligned_cols=170 Identities=11% Similarity=0.012 Sum_probs=104.5
Q ss_pred CEEecCCcchHH-HhhhCCCCCCcC----ceeEEEEEeeCCCC-CCCccceeeEecCCceEEEeecCCcc----------
Q 048694 1 ILIGCDGASSVV-ADFLKLKPKKAF----ASCAVRAFTDYPNG-HGLPQEIVRMRNDHILCGTIPINDKL---------- 64 (193)
Q Consensus 1 lvVgADG~~S~v-R~~~g~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~---------- 64 (193)
+||+|||.+|.+ |+.+|.+...+. ....+......... .+..........+.+.++.+|+.++.
T Consensus 224 ~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~~~~v~~~~~ 303 (526)
T 2pyx_A 224 LFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKGVGYVYSSSH 303 (526)
T ss_dssp EEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEEEEEEECTTT
T ss_pred EEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceEEEEEecCCC
Confidence 589999999999 666776532221 11222222232211 11122222234455677788887643
Q ss_pred ----chhHHHHHHhcCCChHHHhccccCCCCCceeeeeeeecCcccccccccCCcEEEecccCCCCCCCccchhhhhHHH
Q 048694 65 ----LIRSLTLETIKNFPAEKLRNGKDCDLSSLSFTHFRYRAPWDILLGRLQKGTVTVAGDSMHVMAPFIGQGGSAGIED 140 (193)
Q Consensus 65 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~d 140 (193)
...+.+.+.+..+.+.+. ... ...++... ...++|..+||+|+|||||+++|+.|||+|+|++|
T Consensus 304 ~~~~~~~~~l~~~l~~~~~~l~----~~~---~~~~~~~~-----~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~d 371 (526)
T 2pyx_A 304 TNDIDAQKTLFNYLGVDGAAAD----KLE---PRQLAINP-----GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWT 371 (526)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHH----HCC---CEEEECCC-----EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhcCcccc----cCC---ceEEeccc-----CccccccCCCEEEEEhhhcccCccccccHHHHHHH
Confidence 112233334433322221 111 11222211 12345668999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 141 AVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 141 a~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
|..|+++|... ....+.+++.|+++|+++..++++.....++
T Consensus 372 a~~La~~L~~~----~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 413 (526)
T 2pyx_A 372 ASTLAQQLPPN----RMVMDTISARVNERYQQHWQQIIDFLKLHYV 413 (526)
T ss_dssp HHHHHHTCCSC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhc----CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988631 3556789999999999999998876655543
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.76 E-value=2.5e-18 Score=141.19 Aligned_cols=73 Identities=12% Similarity=-0.033 Sum_probs=62.2
Q ss_pred ccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 109 GRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 109 ~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
++|..+|++|+|||||.++|+.|+|+|+|++||..|+++|.. ....+.+++.|+++|+++..++.+.....++
T Consensus 333 ~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~-----~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 405 (511)
T 2weu_A 333 ERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG-----ERWDPVLISAYNERMAHMVDGVKEFLVLHYK 405 (511)
T ss_dssp SCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC-----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455679999999999999999999999999999999999864 2345678999999999999888877655554
No 27
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.74 E-value=2.6e-18 Score=141.97 Aligned_cols=72 Identities=13% Similarity=-0.069 Sum_probs=61.0
Q ss_pred ccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 048694 109 GRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLV 185 (193)
Q Consensus 109 ~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~ 185 (193)
++|..+||+|+|||||+++|+.|||+|+|++||..|+++|.. ....+.+++.|+++|+++..++.+.....+
T Consensus 325 ~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~-----~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y 396 (538)
T 2aqj_A 325 KRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD-----TSFDPRLSDAFNAEIVHMFDDCRDFVQAHY 396 (538)
T ss_dssp SCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB-----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456789999999999999999999999999999999988863 334567899999999999888877554444
No 28
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.70 E-value=3e-17 Score=135.99 Aligned_cols=73 Identities=14% Similarity=-0.013 Sum_probs=62.7
Q ss_pred ccccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 048694 109 GRLQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDWLLKLILLVH 186 (193)
Q Consensus 109 ~~~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 186 (193)
+++..+|++|||||||+++|+.|||+|+|++||..|+++|.. ....+.+++.|+++|+++...+.+.....+.
T Consensus 356 ~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~-----~~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~ 428 (550)
T 2e4g_A 356 RRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD-----KSLNPVLTARFNREIETMFDDTRDFIQAHFY 428 (550)
T ss_dssp SCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC-----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345679999999999999999999999999999999998864 3446788999999999999988887765554
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.21 E-value=2.9e-12 Score=104.86 Aligned_cols=66 Identities=20% Similarity=0.147 Sum_probs=51.0
Q ss_pred ccccccccCCc-EEEecccCCC-CCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHHhHHHH
Q 048694 105 DILLGRLQKGT-VTVAGDSMHV-MAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVKERRTRLLDW 177 (193)
Q Consensus 105 ~~~~~~~~~~~-v~LiGDAAh~-~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~~r~~~~~~~ 177 (193)
...+++|..|| ++|+|||||. +.| .|||+|+||+||..|++.|...+.+ ......| .+|++....+
T Consensus 384 ~r~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l~~~l~~~~~g--~~~~~~l----~~r~~~~~~l 451 (497)
T 2bry_A 384 ARVQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDAAWMVKRWAEG--AGPLEVL----AERESLYQLL 451 (497)
T ss_dssp EEEEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHHHHHHHHHHTT--CCHHHHH----HHHHHHHTTG
T ss_pred hHHHHhcCCcccceEeccccccCcCc-cccchhhHHHHHHHHHHHHHHHhCC--CCccchh----hhHHHHhhhh
Confidence 45667888998 9999999994 555 9999999999999999999988652 3344455 6677655443
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.07 E-value=3.6e-05 Score=59.14 Aligned_cols=35 Identities=17% Similarity=-0.007 Sum_probs=31.3
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.+|++|+|||+|. .|++.|+.++..||+.|.+.++
T Consensus 294 ~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 294 DLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 4899999999964 4999999999999999988765
No 31
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.52 E-value=6.8e-05 Score=54.99 Aligned_cols=37 Identities=16% Similarity=-0.016 Sum_probs=32.7
Q ss_pred cCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCC
Q 048694 112 QKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMP 154 (193)
Q Consensus 112 ~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~ 154 (193)
..+||+|+|||++ |.|++.||.+|..+|+.|.+.++.
T Consensus 293 ~~~~v~l~GDa~~------g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecccC------CcCHHHHHHHHHHHHHHHHHHhhc
Confidence 4689999999964 779999999999999999998863
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=93.33 E-value=0.55 Score=36.49 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=24.8
Q ss_pred CCcEEEecccC----CCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSM----HVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAA----h~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++..++|++. +...-++|.|+..|..-|..|++.|..
T Consensus 333 ~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 333 MDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp TTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred CCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 46777888864 122334566777777777777777754
No 33
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=92.78 E-value=0.58 Score=36.08 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=29.6
Q ss_pred CCcEEEecccC-----CCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSM-----HVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAA-----h~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++..++|++. ....+++|.|+.+|...|..+++.+..
T Consensus 319 ~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 319 KDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp SSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 45566777753 335678999999999999999999865
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=84.93 E-value=6.5 Score=30.06 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=20.3
Q ss_pred CCCccchhhhhHHHHHHHHHHHHh
Q 048694 127 APFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 127 ~P~~g~G~~~al~da~~La~~l~~ 150 (193)
..++|.|+.+|..-|..+++.+..
T Consensus 331 ~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 331 AGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred EecCcchHhhhHHHHHHHHHHHhC
Confidence 457788999999999999998865
No 35
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=80.65 E-value=0.34 Score=36.79 Aligned_cols=40 Identities=13% Similarity=0.035 Sum_probs=30.8
Q ss_pred CCcEEEecccCCCCCCCccchhhh--hHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSA--GIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~--al~da~~La~~l~~~~ 152 (193)
.++|+.+|||+...++...+|.+. +|.++...|+.+.+++
T Consensus 283 vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp SBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 579999999998888777776432 4678888888887643
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=74.85 E-value=19 Score=27.25 Aligned_cols=38 Identities=18% Similarity=0.029 Sum_probs=25.5
Q ss_pred CCcEEEecccC-----CCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSM-----HVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAA-----h~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++.-+||... ....-++|.|+.+|-.-|..+++.|..
T Consensus 315 ~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~g 357 (381)
T 3nyc_A 315 ADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRH 357 (381)
T ss_dssp TTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHTT
T ss_pred CCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHhC
Confidence 34555566542 223446788999998888888888855
No 37
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=69.51 E-value=42 Score=26.91 Aligned_cols=40 Identities=8% Similarity=-0.127 Sum_probs=28.2
Q ss_pred CCcEEE--ecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTV--AGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~L--iGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.+.++. .++..|.+....|.|+..+-.=|..+++.+.+.+
T Consensus 332 ~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 332 RDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp CCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGGS
T ss_pred CceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHhh
Confidence 456666 6777777777778788887666777777776553
No 38
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=68.65 E-value=4.8 Score=31.97 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=28.2
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
+++.++||+.+ |.|++-|+.+|..+|+.|...+.
T Consensus 433 ~~l~~aG~~~~------g~g~~~a~~sG~~aA~~i~~~l~ 466 (475)
T 3lov_A 433 PGIYLAGLAYD------GVGLPDCVASAKTMIESIELEQS 466 (475)
T ss_dssp TTEEECSTTTS------CSSHHHHHHHHHHHHHHHHHTC-
T ss_pred CCEEEEccCCC------CCCHHHHHHHHHHHHHHHHHHhh
Confidence 68999999643 56899999999999999987654
No 39
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=66.85 E-value=4.8 Score=31.74 Aligned_cols=32 Identities=19% Similarity=0.117 Sum_probs=26.8
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.+|+.++||+. .|.|++.|+.+|..+|+.|..
T Consensus 435 ~~~l~~aG~~~------~g~gv~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 435 YPGVYMTGASF------EGVGIPDCIDQGKAAVSDALT 466 (470)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecC------CCCCHHHHHHHHHHHHHHHHH
Confidence 37899999963 367899999999999988865
No 40
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=66.29 E-value=6.8 Score=29.20 Aligned_cols=37 Identities=11% Similarity=-0.031 Sum_probs=28.3
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||++.... ..+..|+.+|..+|..+.+.+.
T Consensus 299 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 299 VPGFFAAGDVQDSKY----RQAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp STTEEECGGGGCSSC----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeeccCCCCc----cceeeehhhhHHHHHHHHHHHh
Confidence 479999999998422 2357789999999988877554
No 41
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=65.70 E-value=4.3 Score=32.46 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=25.2
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
+|+.|+||..|. |.|+..++.++...|+.|.+-+.
T Consensus 458 ~gLyl~G~~t~p-----G~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 458 TNLYLVGAGTHP-----GAGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp TTEEECCCH-----------HHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCC-----cccHHHHHHHHHHHHHHHHHHhc
Confidence 689999998763 77999999999999998876544
No 42
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=62.75 E-value=9.4 Score=28.91 Aligned_cols=53 Identities=15% Similarity=0.032 Sum_probs=32.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccCCChhhHHHHHHHHHH
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTMPQYEKIGEALDEYVK 168 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~~~~~~~~~~l~~y~~ 168 (193)
.++|+.+||++....+..+ .+..+-+.+..+++.|...... ...+..++.|+.
T Consensus 300 ~~~v~a~GD~~~~~~~~~~-~~~~~~~~a~~~a~~l~~~~~~--p~~~~~~~~~~~ 352 (369)
T 3d1c_A 300 YPNIFMIGATVENDNAKLC-YIYKFRARFAVLAHLLTQREGL--PAKQEVIENYQK 352 (369)
T ss_dssp STTEEECSTTCCCSSCCCC-SHHHHGGGHHHHHHHHHHHTTC--CCCHHHHHHHHH
T ss_pred CCCeEEeccccccCCeeEE-EEehhhHHHHHHHHHHhcccCC--CCcchHHHHHHh
Confidence 4799999999887555433 3344556677788877654431 112345667765
No 43
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=61.60 E-value=6.3 Score=31.93 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=29.6
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.++|+-+||+|....|-+|| .|.+.|..+|+.|...
T Consensus 364 ~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 364 SNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKM 399 (502)
T ss_dssp CSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHH
Confidence 47999999999887776665 5889999999988654
No 44
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=61.34 E-value=6.9 Score=29.55 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=27.1
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.+++.|+||+.+ |-|++-|+.+|..+|+.|..
T Consensus 309 ~~~l~laGd~~~------g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 309 KPFLACGGDGFT------QSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp TTEEEECSGGGS------CSSHHHHHHHHHHHHHHHTT
T ss_pred CccEEEEccccC------CCCccHHHHHHHHHHHHHHh
Confidence 478999999974 45999999999999988865
No 45
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=60.71 E-value=8 Score=30.61 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=27.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.+++.|+||. +.|.|++.|+.+|..+|+.|..
T Consensus 441 ~~~l~l~G~~------~~G~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 441 RLPLTLAGAS------YEGVAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TCSEEECSTT------TSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccC------CCCCcHHHHHHHHHHHHHHHHh
Confidence 3689999998 4688999999999999998865
No 46
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=60.69 E-value=7.1 Score=30.43 Aligned_cols=32 Identities=22% Similarity=0.107 Sum_probs=27.1
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHH
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCL 148 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l 148 (193)
+++.|+||..+ |..|-.+.-|+.+|..+|+.|
T Consensus 372 ~gl~laGd~~~---~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 372 NEVLVVGDGYR---PPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp SSEEECSTTCC---CTTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCccc---CCCceeeehHHHHHHHHHHHh
Confidence 89999999986 434556699999999999998
No 47
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=58.24 E-value=11 Score=27.83 Aligned_cols=38 Identities=18% Similarity=0.062 Sum_probs=28.0
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++... .....+..|+.+|..++..+...+
T Consensus 279 ~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l 316 (323)
T 3f8d_A 279 VPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYV 316 (323)
T ss_dssp STTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHH
Confidence 47899999998763 122346778888888888886643
No 48
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=57.91 E-value=11 Score=29.64 Aligned_cols=36 Identities=6% Similarity=-0.021 Sum_probs=28.6
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.+|+.|+||+.+...| | ++.-|++++...|+.|.+.
T Consensus 415 ~~~l~~aG~~~~~~~~--g-~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGY--Q-HVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp BTTEEECCGGGCSTTT--T-SHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEeecccccccc--c-chHHHHHHHHHHHHHHHHH
Confidence 3799999999865444 4 6888999999999888653
No 49
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=57.90 E-value=12 Score=27.73 Aligned_cols=37 Identities=19% Similarity=0.061 Sum_probs=29.0
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||++.... .....|+.++..+|..+.+.+.
T Consensus 278 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~ 314 (320)
T 1trb_A 278 IPGVFAAGDVMDHIY----RQAITSAGTGCMAALDAERYLD 314 (320)
T ss_dssp STTEEECGGGGCSSS----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEcccccCCcc----hhhhhhhccHHHHHHHHHHHHH
Confidence 479999999987532 2357789999999998887665
No 50
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=57.02 E-value=15 Score=27.27 Aligned_cols=37 Identities=19% Similarity=0.101 Sum_probs=28.2
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||++.... .....|+.++..++..+...+.
T Consensus 280 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 280 VPGVYAAGDVTSGNF----AQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp STTEEECSTTBTTCC----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeecccCcch----hhHHHHHHHHHHHHHHHHHHhh
Confidence 468999999997521 2466789999999988876543
No 51
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=56.77 E-value=13 Score=24.86 Aligned_cols=36 Identities=17% Similarity=0.068 Sum_probs=27.2
Q ss_pred cCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 112 QKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 112 ~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
..++|+.+||++....| -...|+.++..++..+...
T Consensus 134 ~~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 134 SYPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp SSTTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHH
Confidence 35799999999987554 3467888888888877653
No 52
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=56.47 E-value=59 Score=24.19 Aligned_cols=19 Identities=21% Similarity=0.340 Sum_probs=14.8
Q ss_pred CEEecCCcch-HHHhhh-CCC
Q 048694 1 ILIGCDGASS-VVADFL-KLK 19 (193)
Q Consensus 1 lvVgADG~~S-~vR~~~-g~~ 19 (193)
.||.|+|.+| .+.+.+ |.+
T Consensus 200 ~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 200 VLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EEEECCGGGHHHHHHTEETSC
T ss_pred EEEECCCcchHHHHHHhcCCC
Confidence 3899999999 567777 764
No 53
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=56.31 E-value=9.9 Score=27.63 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=27.1
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++.. | ..+..|+.++..+|..+.+.+
T Consensus 257 ~~~vya~GD~~~~--~---~~~~~A~~~g~~aa~~i~~~l 291 (297)
T 3fbs_A 257 ARGIFACGDVARP--A---GSVALAVGDGAMAGAAAHRSI 291 (297)
T ss_dssp STTEEECSGGGCT--T---CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCc--h---HHHHHHHHhHHHHHHHHHHHH
Confidence 3789999999986 2 245778888988888886644
No 54
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=56.23 E-value=13 Score=26.47 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=25.5
Q ss_pred cCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 112 QKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 112 ~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
..++|..+||+| . .. -...+++++..+|+.|...
T Consensus 197 ~~p~iya~G~~a-~-~g----~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 197 RLEGLYAVGLCV-R-EG----DYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp TSBSEEECGGGT-S-CC----CHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeecc-c-Cc----cHHHHHHHHHHHHHHHHhh
Confidence 468999999999 3 22 2235689999999988664
No 55
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=54.90 E-value=7.4 Score=30.41 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=30.9
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...+|..|. -...|..+|..++..|..
T Consensus 265 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 265 CPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp STTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 47999999999987776663 356899999999998864
No 56
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=54.54 E-value=12 Score=29.92 Aligned_cols=35 Identities=11% Similarity=0.017 Sum_probs=28.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.+++.++||+.+ |.|++-|+..|...|+.|...+.
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 379999999965 45899999999999988876543
No 57
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=52.93 E-value=12 Score=27.76 Aligned_cols=39 Identities=13% Similarity=-0.123 Sum_probs=28.3
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||++... ..-.-+..|+.+|..++..+...+.
T Consensus 277 ~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~ 315 (332)
T 3lzw_A 277 IEGFFAAGDICTYE--GKVNLIASGFGEAPTAVNNAKAYMD 315 (332)
T ss_dssp STTEEECGGGEECT--TCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCEEEccceecCC--CCcceEeeehhhHHHHHHHHHHhhC
Confidence 47899999998642 1223456788888988888877654
No 58
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=51.06 E-value=18 Score=24.89 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=29.2
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.+||+++||+.+. .+ .-+.-|++.+...++.|.+.+.
T Consensus 117 ~grl~FAGe~ts~-~~---g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 117 EGPVYFAGEHVSL-KH---AWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp BTTEEECSGGGTT-ST---TSHHHHHHHHHHHHHHHHTCCC
T ss_pred CCcEEEEEHHHcC-Cc---cCHHHHHHHHHHHHHHHHHHhc
Confidence 4799999999873 22 3477799999999998887664
No 59
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=50.55 E-value=23 Score=27.85 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=30.3
Q ss_pred CCcEEEecccCCCCCCC-------ccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPF-------IGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~-------~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||+++..+|. .-.-...|+..|..+|+.|...+.
T Consensus 297 ~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~ 344 (437)
T 3sx6_A 297 YANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE 344 (437)
T ss_dssp CTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 57999999999976531 122345788999999988876654
No 60
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=50.29 E-value=13 Score=29.31 Aligned_cols=38 Identities=24% Similarity=0.190 Sum_probs=30.3
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..|. -...|+.++..++..+..
T Consensus 272 ~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 272 VENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp STTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 46899999999887776653 456889999999988854
No 61
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=49.64 E-value=7.8 Score=30.16 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=30.8
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...+|..|. -...|...|..+|..|..
T Consensus 267 ~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 267 DPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp STTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 47999999999988887664 257888999998888754
No 62
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=49.55 E-value=17 Score=27.00 Aligned_cols=36 Identities=14% Similarity=-0.025 Sum_probs=27.2
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++.... .....|+.++..+|..+.+.+
T Consensus 287 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l 322 (333)
T 1vdc_A 287 VPGVFAAGDVQDKKY----RQAITAAGTGCMAALDAEHYL 322 (333)
T ss_dssp STTEEECGGGGCSSC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeeccCCCc----hhHHHHHHhHHHHHHHHHHHH
Confidence 479999999987532 235678888888888887644
No 63
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=49.14 E-value=9.8 Score=29.98 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=30.7
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...+|..|. -...|..+|..++..|..
T Consensus 276 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 318 (431)
T 1q1r_A 276 DPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCG 318 (431)
T ss_dssp STTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcC
Confidence 47999999999987776653 356799999999988854
No 64
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=48.89 E-value=12 Score=29.02 Aligned_cols=32 Identities=13% Similarity=0.009 Sum_probs=26.8
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHH
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCL 148 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l 148 (193)
+++.|+||..+ |-+|.|++-++.+|...++.|
T Consensus 392 ~gL~laG~~~~---~~gg~gv~~~~~s~~~~~~~i 423 (425)
T 3ka7_A 392 SGLYVVGDGAK---GKGGIEVEGVALGVMSVMEKV 423 (425)
T ss_dssp BTEEECSTTSC---CTTCCHHHHHHHHHHHHHHC-
T ss_pred CCeEEeCCccC---CCCCCccHHHHHHHHHHHHHh
Confidence 58999999954 678899999999999888765
No 65
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=48.84 E-value=17 Score=28.10 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=28.1
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||+++...|-. ...|..+|..++..|...+
T Consensus 299 ~~~vfa~GD~~~~~~~~~---~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 299 YDNVYAVGDANSMTVPKL---GYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CTTEEECGGGBTTCCSCC---HHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeehhccCCCCcH---HHHHHHHHHHHHHHHHHHh
Confidence 479999999998644432 3568888888888887765
No 66
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=46.92 E-value=15 Score=28.53 Aligned_cols=37 Identities=11% Similarity=-0.009 Sum_probs=29.0
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..+. ...|+..|..+|..|..
T Consensus 257 ~~~IyA~GD~a~~~~~~~~~-~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 257 IKDIYACGDVAEFYGKNPGL-INIANKQGEVAGLNACG 293 (385)
T ss_dssp STTEEECGGGEEETTBCCCC-HHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEeeEecCCCcccH-HHHHHHHHHHHHHHhcC
Confidence 57999999999876554443 57899999999988864
No 67
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=46.80 E-value=26 Score=27.37 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=29.9
Q ss_pred CCcEEEecccCCCCCCC-------ccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPF-------IGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~-------~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||++...+|. .-.-...|+..|..+|+.|...+.
T Consensus 286 ~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~ 333 (430)
T 3h28_A 286 YKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp STTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 57999999999876431 112346788899999988876654
No 68
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=46.74 E-value=17 Score=28.76 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=26.9
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.+|+.++||+. .|.|+.-|+..|..+|+.|...+
T Consensus 440 ~~~l~~aG~~~------~g~gv~gA~~SG~~aA~~i~~~l 473 (478)
T 2ivd_A 440 LPGLHLIGNAY------KGVGLNDCIRNAAQLADALVAGN 473 (478)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHCC--
T ss_pred CCCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHhh
Confidence 37999999984 25689999999999999886543
No 69
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=46.69 E-value=25 Score=26.04 Aligned_cols=36 Identities=14% Similarity=0.062 Sum_probs=27.0
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++.... .-...|+.++..++..+...+
T Consensus 276 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l 311 (325)
T 2q7v_A 276 IPMLFAAGDVSDYIY----RQLATSVGAGTRAAMMTERQL 311 (325)
T ss_dssp STTEEECSTTTCSSC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCccH----HHHHHHHHHHHHHHHHHHHHH
Confidence 468999999987632 235678888888888886644
No 70
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=44.68 E-value=17 Score=29.62 Aligned_cols=38 Identities=13% Similarity=0.147 Sum_probs=30.0
Q ss_pred CCcEEEecccCCCCCCCccch-----hhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQG-----GSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G-----~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..|.- ...|..++..+++.|..
T Consensus 295 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 295 DPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp STTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 478999999998776655542 56789999999988864
No 71
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=44.51 E-value=25 Score=28.27 Aligned_cols=37 Identities=16% Similarity=0.079 Sum_probs=29.8
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
+|+.|+||+.+.-.| | ++.-|+++|...|+.|.+.+.
T Consensus 419 ~~L~fAG~~t~~~~~--g-~v~GAi~SG~~aA~~i~~~l~ 455 (520)
T 1s3e_A 419 DRIYFAGTETATHWS--G-YMEGAVEAGERAAREILHAMG 455 (520)
T ss_dssp TTEEECSGGGCSSST--T-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeehhhcCcCc--E-EhHHHHHHHHHHHHHHHHHHh
Confidence 799999999865433 3 789999999999998876553
No 72
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=43.75 E-value=23 Score=25.89 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=26.8
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||+++.. | ..+..|+.++..++..+.+.+
T Consensus 276 ~~~v~a~GD~~~~~-~---~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 276 VAGLFAAGDLRKDA-P---KQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp STTEEECGGGBTTC-C---CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCCc-h---hhhhhHHhhHHHHHHHHHHHH
Confidence 47899999998642 2 345678888888888887643
No 73
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=43.75 E-value=54 Score=27.57 Aligned_cols=25 Identities=16% Similarity=0.029 Sum_probs=20.8
Q ss_pred CCCCccchhhhhHHHHHHHHHHHHh
Q 048694 126 MAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 126 ~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
...++|.|+.+|-.-|..|++.|..
T Consensus 624 a~G~g~~Gl~~ap~~ae~lA~~i~g 648 (689)
T 3pvc_A 624 VGGLGSRGLCSAPLVAEILAAQMFG 648 (689)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHTT
T ss_pred hhcccccHHHHHHHHHHHHHHHHcC
Confidence 4567888999999999999988854
No 74
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=43.73 E-value=30 Score=25.48 Aligned_cols=36 Identities=17% Similarity=0.036 Sum_probs=25.8
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++..... -+..|+.++..+|..+.+++
T Consensus 270 ~pgIyA~GDv~~~~~~----~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 270 VPGIFAAGDVRDKGLR----QIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp STTEEECSTTBSCSCC----SHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCCcch----HHHHHHHHHHHHHHHHHHHH
Confidence 4789999999753221 24578888888888886654
No 75
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=43.66 E-value=20 Score=28.53 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=28.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.+|+.++|++.+. .+.|+.-|++.|...|+.|...
T Consensus 450 ~~~l~faG~~~~~----~~~~v~gAi~sg~~aA~~i~~~ 484 (489)
T 2jae_A 450 VDKIYFAGDHLSN----AIAWQHGALTSARDVVTHIHER 484 (489)
T ss_dssp BTTEEECSGGGBS----STTSHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeEHHhcc----CccHHHHHHHHHHHHHHHHHHH
Confidence 4799999998752 5778999999999999888653
No 76
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=42.97 E-value=18 Score=29.05 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=29.9
Q ss_pred CCcEEEecccCCCCCCCcc-----chhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIG-----QGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g-----~G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..| +-...|..++..++..|..
T Consensus 318 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 318 IPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp STTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 4689999999987665554 3467899999999988864
No 77
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=42.80 E-value=56 Score=27.37 Aligned_cols=25 Identities=20% Similarity=0.130 Sum_probs=20.6
Q ss_pred CCCCccchhhhhHHHHHHHHHHHHh
Q 048694 126 MAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 126 ~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
...++|.|+.+|-.-|..|++.|..
T Consensus 620 a~G~g~~Gl~~Ap~~ae~lA~~i~g 644 (676)
T 3ps9_A 620 FAALGSRGLCSAPLCAEILAAQMSD 644 (676)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHTT
T ss_pred eecccccHHHHHHHHHHHHHHHHcC
Confidence 4567888999999999999988854
No 78
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=42.67 E-value=14 Score=28.75 Aligned_cols=38 Identities=18% Similarity=0.145 Sum_probs=30.6
Q ss_pred CCcEEEecccCCCCCCCc-cc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFI-GQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~-g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...+|.. |. -...|...|..+|..|..
T Consensus 277 ~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 277 LTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp STTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcC
Confidence 479999999999887765 42 357899999999988864
No 79
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=42.42 E-value=33 Score=25.46 Aligned_cols=37 Identities=16% Similarity=-0.078 Sum_probs=26.9
Q ss_pred CCcEEEec--ccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAG--DSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiG--DAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+| |++.. .|- .+..|+.+|..+|..|...+.
T Consensus 314 ~~~vya~Gd~d~~~~-~~~---~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 314 VPSVWLLGYGDWNGM-ASA---TLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp CTTEEECSSCGGGST-TCS---STTTHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEecccccccc-chh---hhhhhHHHHHHHHHHHHHHHH
Confidence 47899999 66652 222 234489999999999988765
No 80
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=42.32 E-value=22 Score=26.40 Aligned_cols=39 Identities=18% Similarity=0.004 Sum_probs=27.0
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||++.... .-.-+..|+.++..++..+...+.
T Consensus 279 ~~~vya~GD~~~~~~--~~~~~~~A~~~g~~aa~~i~~~l~ 317 (335)
T 2zbw_A 279 IPGVYACGDIVTYPG--KLPLIVLGFGEAAIAANHAAAYAN 317 (335)
T ss_dssp STTEEECSTTEECTT--CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEeccccccCc--chhhhhhhHHHHHHHHHHHHHHhh
Confidence 478999999987532 112345678888888888766543
No 81
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=41.53 E-value=16 Score=28.98 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=29.6
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..|. -...|..++..+++.|..
T Consensus 286 ~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 286 DPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp STTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred CCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 47899999999776665553 346789999999988863
No 82
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=40.96 E-value=13 Score=29.46 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=30.1
Q ss_pred CCcEEEecccCCCCCCCcc-----chhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIG-----QGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g-----~G~~~al~da~~La~~l~~ 150 (193)
.++|..+||++...++..| +-...|..++..++..|..
T Consensus 274 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 274 NRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp STTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 4689999999987766555 3467899999999988753
No 83
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=40.81 E-value=27 Score=27.63 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=28.1
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
+|+.|+||+.|. ..+.++.-|++.+...|+.|.+.
T Consensus 423 ~~l~fAG~~t~~---~~~g~v~GA~~SG~~aA~~i~~~ 457 (472)
T 1b37_A 423 GRVYFTGEHTSE---HYNGYVHGAYLSGIDSAEILINC 457 (472)
T ss_dssp TTEEECSGGGCT---TTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccCC---CCCCchhHHHHHHHHHHHHHHHH
Confidence 699999999775 33457888999999998888664
No 84
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=39.58 E-value=38 Score=24.77 Aligned_cols=35 Identities=11% Similarity=0.016 Sum_probs=23.1
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.++|+.+||+++...- =...|+.++..+|..+.+.
T Consensus 276 ~pgIyA~GDv~~~~~~----~~~~A~~~G~~AA~~~~~y 310 (314)
T 4a5l_A 276 VDGVFACGDVCDRVYR----QAIVAAGSGCMAALSCEKW 310 (314)
T ss_dssp STTEEECSTTTCSSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeccCCcch----HHHHHHHHHHHHHHHHHHH
Confidence 3689999999875321 1345777777777666554
No 85
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=39.38 E-value=18 Score=28.12 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=29.7
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...+|. |. -...|...|..+|..|..
T Consensus 267 ~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 267 AKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp STTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcC
Confidence 47999999999887775 43 257899999999988864
No 86
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=39.02 E-value=26 Score=30.15 Aligned_cols=35 Identities=26% Similarity=0.225 Sum_probs=27.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.||+.++||+.+...|-. +.-|++.|...|+.|..
T Consensus 741 ~grL~FAGE~Ts~~~~gt---veGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 741 QGTVFFAGEATNRHFPQT---VTGAYLSGVREASKIAA 775 (776)
T ss_dssp TTTEEECSGGGCSSSCSS---HHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEehhhcCCCCcC---HHHHHHHHHHHHHHHHh
Confidence 589999999998766633 66688889888887753
No 87
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=38.48 E-value=34 Score=27.19 Aligned_cols=38 Identities=18% Similarity=0.083 Sum_probs=29.0
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.+|+.++||+.+.-.| ..+.-|++.+...|+.|.+.+.
T Consensus 449 ~~~l~fAGe~t~~~~~---g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 449 HGGVVFANSDWALGWR---SFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp BTTEEECCGGGCSSST---TSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEechhhhcCCc---eEEEhHHHHHHHHHHHHHHHhc
Confidence 4799999999764333 3478899999999988876554
No 88
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=37.09 E-value=27 Score=28.69 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=29.4
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..|. -...|...|..+++.|..
T Consensus 310 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 310 DPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp STTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 47899999999876665553 346788999999988864
No 89
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=36.84 E-value=25 Score=28.02 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=30.0
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..|. -...|..++..++..|..
T Consensus 310 ~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 310 VQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp STTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 46899999999876665543 367899999999988854
No 90
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=36.79 E-value=24 Score=27.03 Aligned_cols=34 Identities=26% Similarity=0.496 Sum_probs=30.5
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
++||.++| ++|+.|+|...+-|+...+...|.+.
T Consensus 204 ~PrIAV~g-----LNPHAGE~G~~G~EE~~iI~PAi~~l 237 (334)
T 3lxy_A 204 QPQIYVCG-----LNPHAGEGGHMGHEEIDTIIPALNTL 237 (334)
T ss_dssp SCCEEEEC-----SSGGGGGGGTTCSHHHHTHHHHHHHH
T ss_pred CCCEEEEe-----cCCCCCCCCCCCchhHHHHHHHHHHH
Confidence 68999988 99999999999999999988888664
No 91
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=35.79 E-value=18 Score=29.04 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=28.7
Q ss_pred CcEEEecccCCCCCCCccc----hhhhhHHHHHHHHHHHHh
Q 048694 114 GTVTVAGDSMHVMAPFIGQ----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~----G~~~al~da~~La~~l~~ 150 (193)
++|+.+||++...+|..|. -...|+..+..++..+..
T Consensus 311 ~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g 351 (493)
T 1m6i_A 311 SNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTG 351 (493)
T ss_dssp TTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTS
T ss_pred CCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcC
Confidence 5899999999887776553 234789999999988753
No 92
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=35.49 E-value=39 Score=25.94 Aligned_cols=37 Identities=19% Similarity=0.171 Sum_probs=26.1
Q ss_pred CCcEEEecccCCCC-CCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVM-APFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~-~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+-+||+|... .|-+ ...|...|..+|+.|...+
T Consensus 286 ~p~VfAiGDva~~~~~pk~---a~~A~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 286 QPGIHVIGDACNAAPMPKS---AYSANSQAKVAAAAVVALL 323 (401)
T ss_dssp STTEEECGGGBCCTTSCBS---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEecccccCCCCCch---HHHHHHHHHHHHHHHHHHh
Confidence 37999999998643 2323 3567888888888776544
No 93
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=35.27 E-value=33 Score=27.54 Aligned_cols=38 Identities=13% Similarity=0.022 Sum_probs=27.7
Q ss_pred cCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 112 QKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 112 ~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
..+||.++|++.+...|- =+.-|++++...|+.|.+.+
T Consensus 470 ~~~rl~FAGe~ts~~~~g---~v~GA~~SG~raA~~i~~~~ 507 (516)
T 1rsg_A 470 QDSRIRFAGEHTIMDGAG---CAYGAWESGRREATRISDLL 507 (516)
T ss_dssp SSSSEEECSTTSCSTTBT---SHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEeccccccCCCc---cchhHHHHHHHHHHHHHHHh
Confidence 358999999998765553 34557888888887776543
No 94
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=35.03 E-value=46 Score=26.01 Aligned_cols=41 Identities=10% Similarity=-0.049 Sum_probs=27.9
Q ss_pred CCcEEEecccCCCCCCCc-------cchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFI-------GQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~-------g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+-+||+|...++.. -.-...|.+.|..+|+-|...+.
T Consensus 286 ~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~ 333 (430)
T 3hyw_A 286 YKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp STTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 368999999998653211 12234688888899888865544
No 95
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=32.30 E-value=39 Score=25.44 Aligned_cols=39 Identities=15% Similarity=0.031 Sum_probs=27.8
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|+.+||++..... -.-+..|+.++..++..+...+.
T Consensus 290 ~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~ 328 (360)
T 3ab1_A 290 VDGLYAAGDIAYYPGK--LKIIQTGLSEATMAVRHSLSYIK 328 (360)
T ss_dssp STTEEECSTTEECTTC--CCSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEecCccCCCCc--cceeehhHHHHHHHHHHHHhhcC
Confidence 4799999999874321 12356688888888888876654
No 96
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=32.21 E-value=46 Score=24.26 Aligned_cols=35 Identities=14% Similarity=0.041 Sum_probs=26.3
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.++|+.+||++.... .-...|+.++..++..+...
T Consensus 273 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~ 307 (311)
T 2q0l_A 273 VQGLFAAGDIRIFAP----KQVVCAASDGATAALSVISY 307 (311)
T ss_dssp STTEEECSTTBTTCC----CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEcccccCcch----HHHHHHHHhHHHHHHHHHHH
Confidence 468999999998532 23567888888888877653
No 97
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=30.61 E-value=43 Score=24.92 Aligned_cols=36 Identities=17% Similarity=0.004 Sum_probs=26.6
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++.... .-...|+.++..+|..+...+
T Consensus 280 ~~~iya~GD~~~~~~----~~~~~A~~~g~~aA~~i~~~l 315 (335)
T 2a87_A 280 LPGVFAAGDLVDRTY----RQAVTAAGSGCAAAIDAERWL 315 (335)
T ss_dssp STTEEECGGGTCCSC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeecCCccH----HHHHHHHHhHHHHHHHHHHHh
Confidence 478999999987532 235677888888888887654
No 98
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=30.43 E-value=34 Score=26.97 Aligned_cols=38 Identities=13% Similarity=0.045 Sum_probs=29.3
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~~ 150 (193)
.++|+-+||++...++..|. -...|.+.+..+++.|..
T Consensus 268 ~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 268 VPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp STTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 47999999999876655443 356788899999988864
No 99
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=29.51 E-value=53 Score=26.03 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=28.1
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.+|+.++|++.+. ++ | ++.-|++.|...|+.|.+.+
T Consensus 449 ~~~l~fAGe~t~~--~~-g-~~~GAi~SG~raA~~i~~~l 484 (498)
T 2iid_A 449 QGRIYFAGEYTAQ--AH-G-WIDSTIKSGLRAARDVNLAS 484 (498)
T ss_dssp BTTEEECSGGGSS--SS-S-CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccccc--CC-c-CHHHHHHHHHHHHHHHHHHh
Confidence 4799999999853 22 3 68889999999998886643
No 100
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=29.34 E-value=60 Score=23.60 Aligned_cols=35 Identities=14% Similarity=-0.037 Sum_probs=26.0
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.++|+.+||++.... .-...|+.++..+|..+...
T Consensus 269 ~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~ 303 (310)
T 1fl2_A 269 VKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDY 303 (310)
T ss_dssp STTEEECSTTBSCSS----CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCCcc----hhhhhhHhhHHHHHHHHHHH
Confidence 468999999987642 23467888888888877664
No 101
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=28.45 E-value=29 Score=27.29 Aligned_cols=38 Identities=5% Similarity=-0.188 Sum_probs=26.7
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
++|+.+||++|.......+-...|.+.+..++..+...
T Consensus 410 ~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~~~ 447 (463)
T 3s5w_A 410 VAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQHL 447 (463)
T ss_dssp SEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHHH
T ss_pred CeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHhhc
Confidence 46999999998655444445566777777777777654
No 102
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=28.27 E-value=22 Score=28.01 Aligned_cols=38 Identities=11% Similarity=0.047 Sum_probs=28.7
Q ss_pred CCcEEEecccCCCCCCCcc-----chhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIG-----QGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g-----~G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++...++..| +-...|+.++..++..+..
T Consensus 273 ~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 273 EPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp STTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcC
Confidence 4689999999986554444 2467889999999887753
No 103
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=27.80 E-value=40 Score=18.89 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=13.9
Q ss_pred hhhHHHHHHHHHHHHHH
Q 048694 156 YEKIGEALDEYVKERRT 172 (193)
Q Consensus 156 ~~~~~~~l~~y~~~r~~ 172 (193)
.=++.++|..||+.|+.
T Consensus 43 nWDl~AAL~D~eqLrqv 59 (73)
T 2l2d_A 43 NWDLTAALSDYEQLRQV 59 (73)
T ss_dssp TTCHHHHHHHHHHHHHC
T ss_pred CccHhHHhhhHHHHHHH
Confidence 34688999999999864
No 104
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=27.69 E-value=58 Score=25.88 Aligned_cols=35 Identities=20% Similarity=0.034 Sum_probs=27.2
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++.. | .-...|+.++..+|..|...+
T Consensus 409 ~~~VfA~GD~~~g--~---~~v~~A~~~G~~aA~~i~~~L 443 (456)
T 2vdc_G 409 MDGVFAAGDIVRG--A---SLVVWAIRDGRDAAEGIHAYA 443 (456)
T ss_dssp STTEEECGGGGSS--C---CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeccccCC--c---hHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999864 2 236789999999998887644
No 105
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=27.57 E-value=53 Score=27.51 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=28.7
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
+|+.++|++.+...+ .-+.-|++.|...|+.|.+.+.
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHcc
Confidence 799999999886544 3567789999988888876543
No 106
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=27.56 E-value=37 Score=25.98 Aligned_cols=36 Identities=33% Similarity=0.651 Sum_probs=31.7
Q ss_pred cCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 112 QKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 112 ~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++||..+| +||+.|+|..++-|+-..+.-.|.+.-
T Consensus 198 ~~PrIaV~G-----LNPHAGE~G~~G~EE~~iI~Pai~~~r 233 (328)
T 1yxo_A 198 AHPRILVCG-----LNPHAGEGGHLGREEIEVIEPCLERLR 233 (328)
T ss_dssp SSCEEEEEC-----SSGGGGTTTTTCSHHHHTHHHHHHHHH
T ss_pred CCCCEEEEe-----cCCCCCCCCCCCHhHHHHHHHHHHHHH
Confidence 368998887 999999999999999999998887754
No 107
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=27.42 E-value=14 Score=29.25 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=27.6
Q ss_pred CCcEEEecccCCCCCCCccc-----hhhhhHHHHHHHHHHHH
Q 048694 113 KGTVTVAGDSMHVMAPFIGQ-----GGSAGIEDAVVLARCLA 149 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~-----G~~~al~da~~La~~l~ 149 (193)
.++|..+||++...++..|. -...|+.++..++..|.
T Consensus 271 ~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 271 VPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp STTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred CCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 47899999999876554443 45678888888887664
No 108
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=27.41 E-value=39 Score=25.88 Aligned_cols=36 Identities=28% Similarity=0.487 Sum_probs=31.7
Q ss_pred cCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 112 QKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 112 ~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++||..+| ++|+.|+|..++-|+-..+.-.|.+.-
T Consensus 204 ~~PrIaV~G-----LNPHAGE~G~~G~EE~~iI~PAi~~~r 239 (330)
T 2hi1_A 204 VKPRIAVAG-----VNPHAGENGLFGDEETRILTPAITDAR 239 (330)
T ss_dssp SSCEEEEEC-----SSGGGSSTTSCCHHHHHTHHHHHHHHH
T ss_pred CCCCEEEEe-----cCCCCCCCCCCCHhHHHHHHHHHHHHH
Confidence 368998887 999999999999999999998887754
No 109
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=25.02 E-value=51 Score=27.63 Aligned_cols=30 Identities=23% Similarity=0.161 Sum_probs=23.1
Q ss_pred CcEEEecccCCCCCCCccchhhhhHHHHHHHHHH
Q 048694 114 GTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARC 147 (193)
Q Consensus 114 ~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~ 147 (193)
.+|..+|||+..-.+ -+..|+.+|..+|..
T Consensus 641 ~~v~aiGD~~~~~~~----~~~~A~~~g~~aA~~ 670 (671)
T 1ps9_A 641 KTVHLIGGCDVAMEL----DARRAIAQGTRLALE 670 (671)
T ss_dssp CCEEECGGGTCCSSC----CHHHHHHHHHHHHHH
T ss_pred CCEEEECCcCccCch----hHHHHHHHHHHHHHh
Confidence 589999999886544 256788888888764
No 110
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=24.47 E-value=71 Score=25.53 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=27.2
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+.+||++.. .....|+.++..++..+...+
T Consensus 343 ~~~vya~GD~~~~------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 343 KDGIYVAGSAVSI------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp ETTEEECSTTTCC------CCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeccCCc------cCHHHHHHHHHHHHHHHHHHc
Confidence 4689999999974 146789999999999887654
No 111
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=24.01 E-value=1.4e+02 Score=24.28 Aligned_cols=19 Identities=11% Similarity=0.114 Sum_probs=15.2
Q ss_pred CEEecCCcch-HHHhhhCCC
Q 048694 1 ILIGCDGASS-VVADFLKLK 19 (193)
Q Consensus 1 lvVgADG~~S-~vR~~~g~~ 19 (193)
.||.|+|.+| .+++.+|..
T Consensus 223 ~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 223 KVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp EEEECCGGGHHHHHHTTTCC
T ss_pred EEEECCCcchHHHHHhcCCC
Confidence 3899999999 678877654
No 112
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=23.80 E-value=47 Score=25.82 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=30.9
Q ss_pred ccCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 111 LQKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 111 ~~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
..++||.++| ++|+.|+|...+-|+-..+...|.+.
T Consensus 206 l~~PrIaV~G-----LNPHAGE~G~~G~EE~~iI~PAI~~~ 241 (367)
T 3tsn_A 206 THFKKMGLLG-----FNPHAGDYGVIGGEEEKIMEKAIAFV 241 (367)
T ss_dssp HCCSSBEEBC-----SSGGGGTTTTSCCHHHHHHHHHHHHH
T ss_pred cCCCcEEEEe-----cCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 3478998887 99999999999999999988888663
No 113
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=23.51 E-value=52 Score=24.10 Aligned_cols=36 Identities=8% Similarity=0.054 Sum_probs=24.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhcc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNT 152 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~ 152 (193)
.++|+-+||++..... -+..|+.++...|..+.+.+
T Consensus 264 ~p~IyA~GDv~~~~~~----~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 264 EKNIYLAGETTTQGPS----SLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp STTEEECSHHHHTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCcch----HHHHHHHHHHHHHHHHHHHH
Confidence 4789999999743111 14568888888887776643
No 114
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.12 E-value=71 Score=24.36 Aligned_cols=37 Identities=30% Similarity=0.303 Sum_probs=26.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++....+..+ -...|+.++..++..+..
T Consensus 260 ~~~IyA~GD~a~~~~~~~~-~~~~A~~qg~~aa~~i~g 296 (367)
T 1xhc_A 260 AKDVYAIGDCAEYSGIIAG-TAKAAMEQARVLADILKG 296 (367)
T ss_dssp STTEEECGGGEEBTTBCCC-SHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeEeeeecCCCCcc-HHHHHHHHHHHHHHHhcC
Confidence 4799999999865332111 346789999999988854
No 115
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=23.00 E-value=86 Score=24.72 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=25.9
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++|..+||++.. | .-...|+.++..++..|..
T Consensus 300 ~~~Iya~GD~~~~--~---~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 300 IPNVFATGDANGL--A---PYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp STTEEECGGGTCS--C---CSHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEecCCC--C---ccHhHHHHHHHHHHHHHhC
Confidence 4789999999976 2 2346789999999988864
No 116
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=22.59 E-value=48 Score=25.62 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=16.5
Q ss_pred CEEecCCcch-HHHh-hhCCCCC
Q 048694 1 ILIGCDGASS-VVAD-FLKLKPK 21 (193)
Q Consensus 1 lvVgADG~~S-~vR~-~~g~~~~ 21 (193)
.||.|+|.+| .+++ .+|...+
T Consensus 227 ~VV~A~G~~s~~l~~~~~g~~~~ 249 (405)
T 3c4n_A 227 VIIVAAGAAGPALVEQGLGLHTR 249 (405)
T ss_dssp EEEECCGGGHHHHHHHHHCCCCC
T ss_pred EEEECCCccHHHHHHHhcCCCCC
Confidence 4899999999 6887 7776543
No 117
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=21.81 E-value=83 Score=25.36 Aligned_cols=35 Identities=14% Similarity=-0.037 Sum_probs=25.9
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.++|+.+||++.... .-+..|+.++..+|..+...
T Consensus 480 ~p~VfA~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~ 514 (521)
T 1hyu_A 480 VKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDY 514 (521)
T ss_dssp STTEEECSTTBCCSS----CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCCCc----ceeeehHHhHHHHHHHHHHH
Confidence 378999999987532 23567888888888777654
No 118
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=21.44 E-value=94 Score=24.69 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=25.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++|+.+||++.. | .-...|+.++..+++.|..
T Consensus 330 ~~~IyA~GD~~~~--~---~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 330 IAGVYAIGDVVRG--P---MLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp STTEEECGGGSSS--C---CCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEecCCC--c---cchhHHHHHHHHHHHHHcC
Confidence 3789999999854 2 3456788999999988864
No 119
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=20.41 E-value=1e+02 Score=24.27 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=25.5
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++|..+||++.. .| .-...|+.+|..++..+..
T Consensus 306 ~~~IyA~GD~~~~-~~---~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 306 IPDVYAIGDVVDK-GP---MLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp STTEEECGGGBSS-SC---SCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeccCCC-CC---ccHhHHHHHHHHHHHHHcC
Confidence 4689999999973 12 1345789999999988864
No 120
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=20.40 E-value=64 Score=27.15 Aligned_cols=35 Identities=17% Similarity=0.025 Sum_probs=27.6
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhccC
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARNTM 153 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~~~ 153 (193)
.++|..+||++.. + .+..|+.+|..++..|...+.
T Consensus 641 ~~~VyaiGD~~~~-----~-~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 641 IASVRGIGDAWAP-----G-TIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp CSEEEECGGGTSC-----B-CHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEeCCCch-----h-hHHHHHHHHHHHHHHHHhhcc
Confidence 3689999999863 1 345599999999999987654
No 121
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=20.30 E-value=76 Score=24.21 Aligned_cols=37 Identities=22% Similarity=0.061 Sum_probs=24.7
Q ss_pred CCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHh
Q 048694 113 KGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLAR 150 (193)
Q Consensus 113 ~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~ 150 (193)
.++|..+||++....+... -...|..+|..+++.|..
T Consensus 269 ~~~IyA~GD~~~~~~~~~~-~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 269 HANIYALGDCAEVDGLNLL-YVMPLMACARALAQTLAG 305 (384)
T ss_dssp STTEEECGGGEEETTBCCC-SHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeeECCCCcc-hHHHHHHHHHHHHHHhcC
Confidence 4689999999854222111 134578888888888753
No 122
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=20.10 E-value=63 Score=24.85 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=30.1
Q ss_pred cCCcEEEecccCCCCCCCccchhhhhHHHHHHHHHHHHhc
Q 048694 112 QKGTVTVAGDSMHVMAPFIGQGGSAGIEDAVVLARCLARN 151 (193)
Q Consensus 112 ~~~~v~LiGDAAh~~~P~~g~G~~~al~da~~La~~l~~~ 151 (193)
.++|+.++| ++|+.|++...+=|+-....-.+.+.
T Consensus 219 ~~PrIaV~G-----LNPHaGE~G~~G~EE~~iI~Pai~~l 253 (349)
T 4aty_A 219 AHPVVGLMG-----INPHAGEGGLFGRDDIDITEPVARKL 253 (349)
T ss_dssp CCCCEEEEC-----SSGGGGTTTTTCSHHHHTHHHHHHHH
T ss_pred CCCceEEEe-----cCCCCCccccccchHHHHHHHHHHHH
Confidence 368999888 99999999999999998888777654
Done!