Your job contains 1 sequence.
>048697
MAAKKTKGRQKIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVE
AVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGK
ETQPRMWETPVDEHNLQEQLQMDSAFMLGELDLLWKPQLSKYIIEPAI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048697
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175188 - symbol:AGL62 "AGAMOUS-like 62" speci... 260 2.1e-22 1
TAIR|locus:2047304 - symbol:AGL61 "AGAMOUS-like 61" speci... 249 3.0e-21 1
TAIR|locus:2025386 - symbol:AGL28 "AGAMOUS-like 28" speci... 227 6.5e-19 1
TAIR|locus:2102990 - symbol:AGL57 "AGAMOUS-like 57" speci... 226 8.3e-19 1
TAIR|locus:2115420 - symbol:AT4G36590 species:3702 "Arabi... 217 7.5e-18 1
TAIR|locus:2032537 - symbol:AGL59 "AGAMOUS-like 59" speci... 213 2.0e-17 1
TAIR|locus:2206320 - symbol:AGL23 "AGAMOUS-like 23" speci... 209 5.3e-17 1
TAIR|locus:4010713489 - symbol:AGL64 "AGAMOUS-like 64" sp... 203 2.3e-16 1
TAIR|locus:2040819 - symbol:AGL29 "AGAMOUS-like 29" speci... 186 1.4e-14 1
TAIR|locus:2032543 - symbol:AGL58 "AGAMOUS-like 58" speci... 179 7.9e-14 1
TAIR|locus:2103415 - symbol:AGL91 "AGAMOUS-like 91" speci... 165 2.4e-12 1
TAIR|locus:2199444 - symbol:AGL85 "AGAMOUS-like 85" speci... 155 2.8e-11 1
DICTYBASE|DDB_G0281387 - symbol:srfA "SRF-related protein... 147 1.3e-09 1
TAIR|locus:2195798 - symbol:AT1G17310 species:3702 "Arabi... 137 2.2e-09 1
DICTYBASE|DDB_G0282835 - symbol:srfB "putative MADS-box t... 122 3.3e-09 2
UNIPROTKB|Q0D4T4 - symbol:MADS18 "MADS-box transcription ... 119 8.3e-09 2
TAIR|locus:2202420 - symbol:AGL102 "AGAMOUS-like 102" spe... 131 9.7e-09 1
TAIR|locus:2193922 - symbol:AT1G72350 species:3702 "Arabi... 132 1.0e-08 1
TAIR|locus:2121070 - symbol:AGL21 "AT4G37940" species:370... 116 2.4e-08 2
TAIR|locus:2041233 - symbol:SVP "AT2G22540" species:3702 ... 129 3.1e-08 1
UNIPROTKB|Q9XJ66 - symbol:MADS22 "MADS-box transcription ... 126 5.6e-08 1
UNIPROTKB|Q5K4R0 - symbol:MADS47 "MADS-box transcription ... 125 9.5e-08 1
SGD|S000004646 - symbol:MCM1 "Transcription factor involv... 114 1.0e-07 2
TAIR|locus:2825756 - symbol:AGL97 "AGAMOUS-like 97" speci... 125 1.2e-07 1
UNIPROTKB|Q9ATF2 - symbol:FBP5 "MADS-box transcription fa... 124 1.2e-07 1
UNIPROTKB|Q9ATE3 - symbol:FBP28 "MADS-box transcription f... 109 1.7e-07 2
TAIR|locus:2043600 - symbol:AGL6 "AT2G45650" species:3702... 123 1.7e-07 1
WB|WBGene00006844 - symbol:unc-120 species:6239 "Caenorha... 124 2.5e-07 1
FB|FBgn0004101 - symbol:bs "blistered" species:7227 "Dros... 126 2.7e-07 1
TAIR|locus:2082618 - symbol:AGL16 "AGAMOUS-like 16" speci... 122 3.9e-07 1
TAIR|locus:2082613 - symbol:AGL18 "AGAMOUS-like 18" speci... 122 4.7e-07 1
POMBASE|SPAC11E3.06 - symbol:map1 "MADS-box transcription... 123 4.7e-07 1
TAIR|locus:2127213 - symbol:AGL19 "AGAMOUS-like 19" speci... 115 7.5e-07 2
TAIR|locus:2137070 - symbol:AGL14 "AGAMOUS-like 14" speci... 112 7.7e-07 2
TAIR|locus:2098826 - symbol:AGL13 "AGAMOUS-like 13" speci... 121 7.9e-07 1
TAIR|locus:2184427 - symbol:AGL99 "AGAMOUS-like 99" speci... 122 8.1e-07 1
TAIR|locus:2032372 - symbol:SEP3 "SEPALLATA3" species:370... 119 2.9e-06 1
TAIR|locus:2177125 - symbol:AGL15 "AGAMOUS-like 15" speci... 119 3.5e-06 1
UNIPROTKB|Q9ZS29 - symbol:GAGA2 "MADS-box protein, GAGA2"... 106 3.6e-06 2
UNIPROTKB|Q40882 - symbol:fbp11 "Fbp11 protein" species:4... 101 3.7e-06 2
TAIR|locus:2029411 - symbol:AGL67 "AGAMOUS-like 67" speci... 118 5.1e-06 1
UNIPROTKB|Q10CQ1 - symbol:MADS14 "MADS-box transcription ... 109 6.0e-06 2
UNIPROTKB|Q6EUV6 - symbol:grcd3 "MADS domain protein" spe... 117 7.0e-06 1
TAIR|locus:2033273 - symbol:AP1 "AT1G69120" species:3702 ... 117 7.7e-06 1
TAIR|locus:2066050 - symbol:AGL17 "AGAMOUS-like 17" speci... 110 7.9e-06 2
TAIR|locus:2158039 - symbol:AT5G49420 species:3702 "Arabi... 118 9.6e-06 1
UNIPROTKB|Q7XUN2 - symbol:MADS17 "MADS-box transcription ... 116 1.0e-05 1
UNIPROTKB|Q6EU39 - symbol:MADS6 "MADS-box transcription f... 116 1.0e-05 1
CGD|CAL0001975 - symbol:MCM1 species:5476 "Candida albica... 116 1.2e-05 1
UNIPROTKB|Q5AFP3 - symbol:MCM1 "Transcription factor of m... 116 1.2e-05 1
TAIR|locus:2029386 - symbol:AGL66 "AGAMOUS-like 66" speci... 117 1.4e-05 1
UNIPROTKB|O65874 - symbol:MTF1 "MADS-box transcription fa... 115 1.6e-05 1
TAIR|locus:2030621 - symbol:AGL104 "AGAMOUS-like 104" spe... 116 2.0e-05 1
TAIR|locus:2028830 - symbol:CAL "CAULIFLOWER" species:370... 114 2.4e-05 1
ZFIN|ZDB-GENE-040426-1294 - symbol:srfl "serum response f... 115 2.7e-05 1
UNIPROTKB|D2T2G0 - symbol:gsqua2 "GSQUA2 protein" species... 113 2.8e-05 1
TAIR|locus:2165386 - symbol:AGL72 "AGAMOUS-like 72" speci... 112 2.8e-05 1
UNIPROTKB|Q9ATE9 - symbol:FBP20 "MADS-box transcription f... 112 3.1e-05 1
TAIR|locus:2102871 - symbol:AGL79 "AGAMOUS-like 79" speci... 113 3.1e-05 1
TAIR|locus:2121924 - symbol:AGL24 "AT4G24540" species:370... 112 3.3e-05 1
UNIPROTKB|Q6Q9I2 - symbol:MADS15 "MADS-box transcription ... 102 3.3e-05 2
SGD|S000004645 - symbol:ARG80 "Transcription factor invol... 109 3.6e-05 1
UNIPROTKB|Q90718 - symbol:SRF "Serum response factor" spe... 115 3.8e-05 1
UNIPROTKB|Q40885 - symbol:AG1 "Floral homeotic protein AG... 112 4.3e-05 1
UNIPROTKB|Q9FST1 - symbol:grcd1 "MADS box protein" specie... 103 5.1e-05 2
TAIR|locus:505006709 - symbol:AGL42 "AGAMOUS-like 42" spe... 110 5.3e-05 1
TAIR|locus:2005522 - symbol:AGL20 "AT2G45660" species:370... 110 5.6e-05 1
MGI|MGI:106658 - symbol:Srf "serum response factor" speci... 115 6.0e-05 1
RGD|1559787 - symbol:Srf "serum response factor (c-fos se... 115 6.0e-05 1
UNIPROTKB|F1PH12 - symbol:SRF "Uncharacterized protein" s... 115 6.1e-05 1
UNIPROTKB|P11831 - symbol:SRF "Serum response factor" spe... 115 6.1e-05 1
UNIPROTKB|E1BJP4 - symbol:SRF "Uncharacterized protein" s... 115 6.1e-05 1
UNIPROTKB|F1RRM9 - symbol:SRF "Uncharacterized protein" s... 115 6.2e-05 1
ZFIN|ZDB-GENE-990714-29 - symbol:srf "serum response fact... 115 6.6e-05 1
TAIR|locus:2042182 - symbol:AGL44 "AGAMOUS-like 44" speci... 110 7.4e-05 1
UNIPROTKB|Q9ZS25 - symbol:gsqua1 "MADS-box protein, GSQUA... 107 0.00014 1
UNIPROTKB|D2T2F8 - symbol:grcd4 "GRCD4 protein" species:1... 101 0.00015 2
TAIR|locus:2173522 - symbol:AGL8 "AGAMOUS-like 8" species... 108 0.00016 1
UNIPROTKB|Q43616 - symbol:fbp7 "Floral binding protein nu... 107 0.00018 1
UNIPROTKB|Q03489 - symbol:FBP2 "Agamous-like MADS-box pro... 107 0.00021 1
TAIR|locus:2143261 - symbol:SEP1 "SEPALLATA1" species:370... 107 0.00026 1
UNIPROTKB|H0YM62 - symbol:MEF2A "Myocyte-specific enhance... 89 0.00039 1
UNIPROTKB|I3L7L3 - symbol:LOC100738718 "Uncharacterized p... 89 0.00039 1
UNIPROTKB|Q9ATF1 - symbol:FBP9 "MADS-box transcription fa... 105 0.00042 1
TAIR|locus:2140578 - symbol:STK "AT4G09960" species:3702 ... 105 0.00047 1
UNIPROTKB|H0YKY6 - symbol:MEF2A "Myocyte-specific enhance... 88 0.00050 1
UNIPROTKB|Q03378 - symbol:GLO "Floral homeotic protein GL... 103 0.00057 1
TAIR|locus:2159848 - symbol:AT5G38620 species:3702 "Arabi... 106 0.00064 1
UNIPROTKB|D6RG14 - symbol:MEF2C "Myocyte-specific enhance... 86 0.00087 1
UNIPROTKB|D6RJA7 - symbol:MEF2C "Myocyte-specific enhance... 86 0.00087 1
>TAIR|locus:2175188 [details] [associations]
symbol:AGL62 "AGAMOUS-like 62" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009960 "endosperm
development" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000238700 EMBL:AY141236 EMBL:EU493093 EMBL:AB011483
IPI:IPI00517886 IPI:IPI00520610 RefSeq:NP_200852.1 UniGene:At.29160
ProteinModelPortal:Q9FKK2 SMR:Q9FKK2 IntAct:Q9FKK2 STRING:Q9FKK2
EnsemblPlants:AT5G60440.1 GeneID:836165 KEGG:ath:AT5G60440
GeneFarm:3728 TAIR:At5g60440 eggNOG:NOG311592 InParanoid:Q9FKK2
OMA:NISEYEH PhylomeDB:Q9FKK2 ProtClustDB:CLSN2916398
Genevestigator:Q9FKK2 GO:GO:0009960 Uniprot:Q9FKK2
Length = 299
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 61/146 (41%), Positives = 87/146 (59%)
Query: 4 KKTKGRQKIEMI---------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KK+KGRQKIEM+ +TFSKRRS ++K ASEL TL G+E+AIVVFS K ++F
Sbjct: 3 KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62
Query: 55 GHPSVEAVANRFLGMNQLP--NDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKI 112
GHP+V++V +RF+ N LP N L R + +LN ++ QL+ EK++
Sbjct: 63 GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDE 122
Query: 113 LTQMRRGKETQPRMWETPVDEHNLQE 138
L ++R + WE PV+E L +
Sbjct: 123 LKKIREKTKALGNWWEDPVEELALSQ 148
>TAIR|locus:2047304 [details] [associations]
symbol:AGL61 "AGAMOUS-like 61" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009559 "embryo sac central cell
differentiation" evidence=IMP] [GO:0043078 "polar nucleus"
evidence=IDA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0019722 "calcium-mediated signaling"
evidence=RCA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC006585 EMBL:DQ056542
EMBL:EU836691 IPI:IPI00545091 PIR:B84641 RefSeq:NP_850058.1
UniGene:At.52900 ProteinModelPortal:Q4PSU4 SMR:Q4PSU4 IntAct:Q4PSU4
STRING:Q4PSU4 EnsemblPlants:AT2G24840.1 GeneID:817021
KEGG:ath:AT2G24840 GeneFarm:3717 TAIR:At2g24840 eggNOG:NOG244091
HOGENOM:HOG000238700 InParanoid:Q4PSU4 OMA:AASCELN PhylomeDB:Q4PSU4
ProtClustDB:CLSN2918089 ArrayExpress:Q4PSU4 Genevestigator:Q4PSU4
GO:GO:0043078 GO:GO:0009559 Uniprot:Q4PSU4
Length = 264
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 64/163 (39%), Positives = 96/163 (58%)
Query: 1 MAAKKTK-GRQKIEMI---------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGK 50
M+ KK GRQKI M+ +TFSKRR+ ++K ASEL TL G+EI I+VFS + K
Sbjct: 55 MSKKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKK 114
Query: 51 PYTFGHPSVEAVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQE 110
P++FGHPSVE+V +R++ N + L G ELN Q + +++EEK++
Sbjct: 115 PFSFGHPSVESVLDRYVSRNNMSLAQSQQLQ-GSPAASC-ELNMQLTHILSEVEEEKKKG 172
Query: 111 KILTQMRRG--KETQPRMWETPVDEHNLQEQLQMDSAFMLGEL 151
+ + +MR+ + + WE PV+E N+ QLQ + + L EL
Sbjct: 173 QAMEEMRKESVRRSMINWWEKPVEEMNMV-QLQ-EMKYALEEL 213
>TAIR|locus:2025386 [details] [associations]
symbol:AGL28 "AGAMOUS-like 28" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 EMBL:AC061957 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
ProtClustDB:CLSN2679619 EMBL:AY141231 EMBL:DQ446218 EMBL:AB493420
IPI:IPI00522692 PIR:H86145 RefSeq:NP_171660.1 UniGene:At.42643
ProteinModelPortal:Q9LMM8 SMR:Q9LMM8 IntAct:Q9LMM8 STRING:Q9LMM8
EnsemblPlants:AT1G01530.1 GeneID:837142 KEGG:ath:AT1G01530
TAIR:At1g01530 InParanoid:Q9LMM8 OMA:KMTNESN PhylomeDB:Q9LMM8
ArrayExpress:Q9LMM8 Genevestigator:Q9LMM8 Uniprot:Q9LMM8
Length = 247
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 53/149 (35%), Positives = 83/149 (55%)
Query: 3 AKKTKGRQKIEMI---------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYT 53
A+K GR+KIE++ +TFSKRRS ++K SEL TL +EIAI+VFS SGK Y+
Sbjct: 2 ARKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYS 61
Query: 54 FGHPSVEAVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKIL 113
FGHP+V + + LG ++ N + ++RI LN+ E+ + ++E+E ++ +
Sbjct: 62 FGHPNVNKLLDHSLG--RVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSI 119
Query: 114 TQMRRGKETQPRMWETPVDEHNLQEQLQM 142
Q R + + W E NL + M
Sbjct: 120 VQNERENKDAEKWWRNSPTELNLAQSTSM 148
>TAIR|locus:2102990 [details] [associations]
symbol:AGL57 "AGAMOUS-like 57" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831
HOGENOM:HOG000238700 EMBL:AC016829 EMBL:DQ056586 IPI:IPI00531240
RefSeq:NP_187060.1 UniGene:At.53175 ProteinModelPortal:Q9M8W6
SMR:Q9M8W6 IntAct:Q9M8W6 PRIDE:Q9M8W6 EnsemblPlants:AT3G04100.1
GeneID:819565 KEGG:ath:AT3G04100 TAIR:At3g04100 InParanoid:Q9M8W6
OMA:VEVAFLI PhylomeDB:Q9M8W6 ProtClustDB:CLSN2913500
ArrayExpress:Q9M8W6 Genevestigator:Q9M8W6 Uniprot:Q9M8W6
Length = 207
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 54/156 (34%), Positives = 89/156 (57%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
+KTKG+QKIEM +ITFSKR++ I+K +ELV + E+A ++FSQ KPYTF
Sbjct: 10 RKTKGKQKIEMKKVENYGDRMITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKPYTF 69
Query: 55 GHPSVEAVANRFLGMNQ---LPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEK 111
HPS++ VA+R ++ L D+ LV +++ R+++L ++ L +L + E+ K
Sbjct: 70 AHPSMKKVADRLKNPSRQEPLERDDTRPLVEAYKKRRLHDLVKKMEALEEELAMDLEKLK 129
Query: 112 ILTQMRRGKETQPRMWETPVDEHNLQEQLQMDSAFM 147
+L + R K+ W P + + +E Q A +
Sbjct: 130 LLKESRNEKKLDKMWWNFPSEGLSAKELQQRYQAML 165
>TAIR|locus:2115420 [details] [associations]
symbol:AT4G36590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS50066 SMART:SM00432 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AL161589 EMBL:Z99708 EMBL:AY086178
EMBL:AY141234 EMBL:DQ446902 IPI:IPI00520544 PIR:A85432
RefSeq:NP_195377.1 UniGene:At.31315 ProteinModelPortal:O23222
SMR:O23222 IntAct:O23222 STRING:O23222 PRIDE:O23222
EnsemblPlants:AT4G36590.1 GeneID:829811 KEGG:ath:AT4G36590
TAIR:At4g36590 InParanoid:O23222 OMA:DLDMNET PhylomeDB:O23222
ProtClustDB:CLSN2685561 Genevestigator:O23222 Uniprot:O23222
Length = 248
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 57/156 (36%), Positives = 88/156 (56%)
Query: 4 KKTKGRQKIEMI---------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
+ TKGRQKIEM +TFSKRR ++K ASEL TL+G+EI ++VFS GK ++F
Sbjct: 3 RSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSF 62
Query: 55 GHPSVEAVANRFLGMNQ----LPNDNIHSLVVGHRQVR-INELNQQHNELRRQLDEEKEQ 109
GHPSV+ + +RF N + + N + +V R R I LN E+ ++EK++
Sbjct: 63 GHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQK 122
Query: 110 EKILTQMRRGKETQPRMWETPVDEHNLQEQLQMDSA 145
+L ++ +E +E V + ++ E Q+ SA
Sbjct: 123 RMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISA 158
>TAIR|locus:2032537 [details] [associations]
symbol:AGL59 "AGAMOUS-like 59" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00522494 PIR:G86410
RefSeq:NP_174168.1 UniGene:At.51805 ProteinModelPortal:Q9SGP4
SMR:Q9SGP4 EnsemblPlants:AT1G28460.1 GeneID:839745
KEGG:ath:AT1G28460 TAIR:At1g28460 InParanoid:Q9SGP4 OMA:CEQAASR
PhylomeDB:Q9SGP4 Genevestigator:Q9SGP4 Uniprot:Q9SGP4
Length = 182
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 55/148 (37%), Positives = 83/148 (56%)
Query: 1 MAAKKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKP 51
M KKTKG+QKI + +TFSKR + IY SEL L G E+A + +S SGKP
Sbjct: 1 MNPKKTKGKQKINIKKIEKDEGRSVTFSKRLNGIYTKISELSILCGVEVAFIGYSCSGKP 60
Query: 52 YTFGHPSVEAVANRFLGMNQLPNDNIHSLVVG-HRQVRINELNQQHNELRRQLDEEKEQE 110
YTFG PS +AVA RFL + + SLV+ H+Q +I EL +++N L +L ++ +
Sbjct: 61 YTFGSPSFQAVAERFLN-GDASSSSSSSLVMNAHKQAKIQELCKKYNRLVEELKVDEVKV 119
Query: 111 KILTQMRRGKETQPRMWETPVDEHNLQE 138
K + + +W VD +++++
Sbjct: 120 KKAAALAETRVVNKDVW-WKVDPNDVKD 146
>TAIR|locus:2206320 [details] [associations]
symbol:AGL23 "AGAMOUS-like 23" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009553 "embryo
sac development" evidence=IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004512 GO:GO:0009658 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:Q02078 HOGENOM:HOG000238700 GO:GO:0009553
EMBL:AY141230 IPI:IPI00536845 PIR:T02359 RefSeq:NP_176715.1
UniGene:At.35891 ProteinModelPortal:O80807 SMR:O80807 IntAct:O80807
STRING:O80807 EnsemblPlants:AT1G65360.1 GeneID:842846
KEGG:ath:AT1G65360 TAIR:At1g65360 InParanoid:O80807 OMA:QNERENE
PhylomeDB:O80807 ProtClustDB:CLSN2679619 ArrayExpress:O80807
Genevestigator:O80807 Uniprot:O80807
Length = 226
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 46/148 (31%), Positives = 85/148 (57%)
Query: 4 KKTKGRQKIEMI---------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT GR+K+E++ +TFSKR++ ++K ASE TL ++IA++VFS +GK ++F
Sbjct: 3 KKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSF 62
Query: 55 GHPSVEAVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILT 114
GHP+V+ + + F G + N +L + ++ + LN+ + E++ ++++E++ ++
Sbjct: 63 GHPNVDVLLDHFRGC--VVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRA 120
Query: 115 QMRRGKETQPRMWETPVDEHNLQEQLQM 142
Q R E W E NL + M
Sbjct: 121 QNERENENAEEWWSKSPLELNLSQSTCM 148
>TAIR|locus:4010713489 [details] [associations]
symbol:AGL64 "AGAMOUS-like 64" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:P11831 HOGENOM:HOG000238700 EMBL:AY141244 IPI:IPI00852269
RefSeq:NP_001077625.1 UniGene:At.40641 ProteinModelPortal:Q7XJK9
SMR:Q7XJK9 IntAct:Q7XJK9 STRING:Q7XJK9 EnsemblPlants:AT1G29962.1
GeneID:5007741 KEGG:ath:AT1G29962 TAIR:At1g29962 eggNOG:NOG321251
OMA:NEDAWWK PhylomeDB:Q7XJK9 ProtClustDB:CLSN2679626
Genevestigator:Q7XJK9 Uniprot:Q7XJK9
Length = 185
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 55/156 (35%), Positives = 85/156 (54%)
Query: 1 MAAKKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKP 51
M KKTKG+Q+I + ++T SKRR+ IY SEL L G+E+A + +S SGKP
Sbjct: 1 MKPKKTKGKQRINIKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKP 60
Query: 52 YTFGHPSVEAVANRFLG--MNQLPNDNIH-SLVVGHRQVRINELNQQHNELRRQLD-EEK 107
YTFG PS +AVA RFL + + ++ S++ H+Q +I EL + +N L ++ EE
Sbjct: 61 YTFGSPSFQAVAERFLNGEASSSSSSSLQRSVMNAHQQAKIQELCKVYNRLVEEITVEEV 120
Query: 108 EQEKILTQMRRGKETQPRMWET-PVDEHNLQEQLQM 142
+ +K + W+ P D + +E +M
Sbjct: 121 KLKKTAALAEMMPMNEDAWWKVDPNDVKDREEVKKM 156
>TAIR|locus:2040819 [details] [associations]
symbol:AGL29 "AGAMOUS-like 29" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC004077
EMBL:AC004481 EMBL:DQ446598 IPI:IPI00526479 PIR:T02331
RefSeq:NP_180991.1 UniGene:At.37804 ProteinModelPortal:O64703
SMR:O64703 EnsemblPlants:AT2G34440.1 GeneID:818007
KEGG:ath:AT2G34440 TAIR:At2g34440 InParanoid:O64703 OMA:QASSCLM
PhylomeDB:O64703 ProtClustDB:CLSN2683539 ArrayExpress:O64703
Genevestigator:O64703 Uniprot:O64703
Length = 172
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 54/160 (33%), Positives = 95/160 (59%)
Query: 8 GRQKI--EMI-------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS 58
GR+KI EM+ +TFSKRR+ ++K ASEL TL +E+ IVVFS GKP+++G P+
Sbjct: 2 GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61
Query: 59 VEAVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQ-EKILTQMR 117
+++VA RF+ +D+ G+ + ++ L+++ + L ++++ EKE+ EK ++
Sbjct: 62 LDSVAERFMREYD-DSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120
Query: 118 R-GKETQPRMWET-PVDEHN-LQEQLQMDSAFMLGELDLL 154
G E ET +DE N +++LQ + G+++ L
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHL 160
>TAIR|locus:2032543 [details] [associations]
symbol:AGL58 "AGAMOUS-like 58" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00519993 RefSeq:NP_174167.1
UniGene:At.51804 ProteinModelPortal:Q9SGP3 SMR:Q9SGP3 PRIDE:Q9SGP3
EnsemblPlants:AT1G28450.1 GeneID:839743 KEGG:ath:AT1G28450
TAIR:At1g28450 InParanoid:Q9SGP3 PhylomeDB:Q9SGP3
Genevestigator:Q9SGP3 Uniprot:Q9SGP3
Length = 185
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 48/139 (34%), Positives = 72/139 (51%)
Query: 1 MAAKKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKP 51
M KKTKG+QKI + +T SKR + IY EL L G E+A + +S SGKP
Sbjct: 1 MNPKKTKGKQKINIKKIEKDEDRSVTLSKRLNAIYTMIIELSILCGVEVAFIGYSCSGKP 60
Query: 52 YTFGHPSVEAVANRFLG--MNQLPNDNIH-SLVVGHRQVRINELNQQHNELRRQLDEEKE 108
YTFG PS +AV RFL + + ++ S+ H+Q +I EL +++N L +L ++
Sbjct: 61 YTFGSPSFQAVVERFLNGEASSSSSSSLQRSVKNAHKQAKIQELCKRYNRLVEELKVDEV 120
Query: 109 QEKILTQMRRGKETQPRMW 127
+ K + + W
Sbjct: 121 KVKKAAALAETRAVNKDAW 139
>TAIR|locus:2103415 [details] [associations]
symbol:AGL91 "AGAMOUS-like 91" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC036106 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 HOGENOM:HOG000238700
ProtClustDB:CLSN2683539 EMBL:DQ056634 IPI:IPI00548671
RefSeq:NP_187320.1 UniGene:At.64985 ProteinModelPortal:Q9C836
SMR:Q9C836 EnsemblPlants:AT3G66656.1 GeneID:819848
KEGG:ath:AT3G66656 TAIR:At3g66656 InParanoid:Q9C836 OMA:QEKKICK
PhylomeDB:Q9C836 Genevestigator:Q9C836 Uniprot:Q9C836
Length = 178
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 43/133 (32%), Positives = 70/133 (52%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TFSKRR ++K ASEL TL +E+ IVVFS KPY+FG P+ + +A RF + +
Sbjct: 19 VTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSFGKPNFDVIAERFKNEFEEEEE 78
Query: 76 NIHSLVVGHRQVRINELNQQHNELRR--QLDEEKEQEKILTQ-MRRGKETQPR-MWETPV 131
G+ R N Q+ +R + EE E EK + + + E+ + + P+
Sbjct: 79 GDSCETSGYS--RGNRARQEKKICKRLNSITEEAEAEKKHGEDLHKWLESAEQDKFNKPI 136
Query: 132 DEHNLQEQLQMDS 144
+E L+E + ++
Sbjct: 137 EELTLEELKEFEA 149
>TAIR|locus:2199444 [details] [associations]
symbol:AGL85 "AGAMOUS-like 85" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR002100 Pfam:PF00319 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC005388 SUPFAM:SSF55455
HOGENOM:HOG000238700 eggNOG:KOG0014 ProtClustDB:CLSN2679626
IPI:IPI00521245 PIR:F96589 RefSeq:NP_175874.1 UniGene:At.52205
ProteinModelPortal:Q9ZVL8 SMR:Q9ZVL8 EnsemblPlants:AT1G54760.1
GeneID:841917 KEGG:ath:AT1G54760 TAIR:At1g54760 PhylomeDB:Q9ZVL8
Genevestigator:Q9ZVL8 Uniprot:Q9ZVL8
Length = 161
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 38/97 (39%), Positives = 60/97 (61%)
Query: 29 ASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPNDNIH-SLVVGHRQV 87
++EL L G+E+A + +S SGKPYTFG PS +AVA RFL N+ + ++ S++ H+Q
Sbjct: 18 SNELSILCGAEVAFLGYSCSGKPYTFGSPSFQAVAERFL--NREASSSLQRSVMNAHQQA 75
Query: 88 RINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQP 124
+I EL + +N R ++E K +E + + ET P
Sbjct: 76 KIQELCKVYN---RMVEEAKTEEAKVKKAAALAETMP 109
>DICTYBASE|DDB_G0281387 [details] [associations]
symbol:srfA "SRF-related protein" species:44689
"Dictyostelium discoideum" [GO:0042244 "spore wall assembly"
evidence=IMP] [GO:0031289 "actin phosphorylation" evidence=IMP]
[GO:0031247 "actin rod assembly" evidence=IMP] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS;IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
dictyBase:DDB_G0281387 GO:GO:0005634 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0040011 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 EMBL:AAFI02000041 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:P11831 GO:GO:0031154 GO:GO:0042244 GO:GO:0031247 KO:K12412
GO:GO:0031289 EMBL:AJ224893 RefSeq:XP_640674.1
ProteinModelPortal:Q54TY7 SMR:Q54TY7 STRING:Q54TY7
EnsemblProtists:DDB0214892 GeneID:8623058 KEGG:ddi:DDB_G0281387
OMA:ASPNQFN ProtClustDB:CLSZ2430546 Uniprot:Q54TY7
Length = 418
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/160 (29%), Positives = 84/160 (52%)
Query: 5 KTKGRQKI--EMI-------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFG 55
K GR+KI E I ITFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 65 KKAGRRKIKIEFIDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGHVYTFA 124
Query: 56 HPSVEAVANRFLGMNQLPN-----DNIHSLVVGHRQVRINE--LNQQHNEL---RRQLDE 105
++ + R G N + + DN +S + ++ N L QQ + ++QL +
Sbjct: 125 TAKLQPLITRPEGKNLIQSCLNTPDNPNSPSMANQNSNNNSNLLQQQQQQQLQQQQQLQQ 184
Query: 106 EKEQEKILTQMRRGKETQPRMWETPVDEHNLQEQLQMDSA 145
+++Q++ Q ++ ++ Q + + V + Q+ Q +A
Sbjct: 185 QQQQQQQQQQQQQQQQQQQQAAQQAVQQQQQQQAAQQQAA 224
>TAIR|locus:2195798 [details] [associations]
symbol:AT1G17310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC026479
ProtClustDB:CLSN2679559 EMBL:AY141240 EMBL:DQ446258 EMBL:BT025284
EMBL:AB493462 IPI:IPI00524771 PIR:E86309 RefSeq:NP_173175.1
UniGene:At.41842 ProteinModelPortal:Q9LN16 SMR:Q9LN16
EnsemblPlants:AT1G17310.1 GeneID:838303 KEGG:ath:AT1G17310
TAIR:At1g17310 InParanoid:Q9LN16 OMA:IVAMGND PhylomeDB:Q9LN16
ArrayExpress:Q9LN16 Genevestigator:Q9LN16 Uniprot:Q9LN16
Length = 217
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 4 KKTKGRQKIEMI---------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
K T+GRQKIE+ +TFSKRR ++K ++EL LTG++IA++ FS+ + Y F
Sbjct: 44 KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103
Query: 55 GHPSVEAVANRFL 67
GH V+A+ +++L
Sbjct: 104 GH--VDALIDKYL 114
>DICTYBASE|DDB_G0282835 [details] [associations]
symbol:srfB "putative MADS-box transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0019933
"cAMP-mediated signaling" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 dictyBase:DDB_G0282835 GO:GO:0005634
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0019933
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11831 ProtClustDB:CLSZ2430546
RefSeq:XP_639351.1 ProteinModelPortal:Q54RY6 SMR:Q54RY6
PRIDE:Q54RY6 EnsemblProtists:DDB0220492 GeneID:8623792
KEGG:ddi:DDB_G0282835 OMA:WSTASSC Uniprot:Q54RY6
Length = 467
Score = 122 (48.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 4 KKTKGRQKI--EMI-------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
+K GR+KI E I ITFSKR+S I K A EL TLTG+++ ++V S++G YTF
Sbjct: 33 EKKSGRRKINIEFIGDKSRRHITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGHVYTF 92
Query: 55 GHPSVEAVANR 65
P ++ + +
Sbjct: 93 ATPKLQPLITK 103
Score = 49 (22.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 15/75 (20%), Positives = 37/75 (49%)
Query: 70 NQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQPRMWET 129
NQ N N ++L + ++ +L Q N + +Q + +Q + QM + + +++
Sbjct: 234 NQNNNQNNNNLT---QPIQNLQLPLQQNIIAQQQQQLNQQAALQQQMTQ--QIDQKLYNL 288
Query: 130 PVDEHNLQEQLQMDS 144
+ + +Q+Q Q+ +
Sbjct: 289 QLQQQQMQQQQQIQN 303
>UNIPROTKB|Q0D4T4 [details] [associations]
symbol:MADS18 "MADS-box transcription factor 18"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076 GO:GO:0010077
GO:GO:0010154 GO:GO:0009933 EMBL:AP008213 EMBL:AF091458
EMBL:AJ011675 EMBL:AP005175 RefSeq:NP_001060225.1 UniGene:Os.4573
ProteinModelPortal:Q0D4T4 IntAct:Q0D4T4
EnsemblPlants:LOC_Os07g41370.1 GeneID:4343851
KEGG:dosa:Os07t0605200-01 KEGG:osa:4343851 Gramene:Q0D4T4
OMA:PPWMLRT ProtClustDB:CLSN2696916 Uniprot:Q0D4T4
Length = 249
Score = 119 (46.9 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFG-HPSVEAVANRF 66
KI +TFSKRR+ + K A E+ L +++A++VFS GK Y F H S+E + R+
Sbjct: 14 KINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERY 70
Score = 47 (21.6 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 70 NQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKE 121
NQL ++I L Q + L Q+N L++ ++ EKE+ + R ++
Sbjct: 144 NQLLFESISEL-----QKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREEQ 190
>TAIR|locus:2202420 [details] [associations]
symbol:AGL102 "AGAMOUS-like 102" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 EMBL:AC012463 EMBL:AY141241
IPI:IPI00548327 RefSeq:NP_175207.1 UniGene:At.38560
ProteinModelPortal:Q9FZF2 SMR:Q9FZF2 IntAct:Q9FZF2 STRING:Q9FZF2
EnsemblPlants:AT1G47760.1 GeneID:841187 KEGG:ath:AT1G47760
TAIR:At1g47760 HOGENOM:HOG000152598 InParanoid:Q9FZF2 OMA:VVERIQN
PhylomeDB:Q9FZF2 ProtClustDB:CLSN2914527 Genevestigator:Q9FZF2
Uniprot:Q9FZF2
Length = 184
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 12 IEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQ 71
IE TFS+RR+ I+K A EL L EIA++V S + PYT+G+P V R N
Sbjct: 15 IERKATFSRRRNGIFKKADELAKLCNVEIAVLVISPTNIPYTYGYPCFNDVVERI--QNP 72
Query: 72 LPNDNIHSLVVGHRQVRINELNQQ-HNELRRQLDEEKEQEKI 112
+ + SL+ Q++ E + + +R L++ +E +
Sbjct: 73 SASSKLRSLMKELEQIK--EFQEDLRKKQQRNLEKSNMKENV 112
>TAIR|locus:2193922 [details] [associations]
symbol:AT1G72350 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC016529
EMBL:AY141235 EMBL:DQ446421 EMBL:BT025647 IPI:IPI00525774
PIR:D96747 RefSeq:NP_177379.1 UniGene:At.64898
ProteinModelPortal:Q9C9D4 SMR:Q9C9D4 EnsemblPlants:AT1G72350.1
GeneID:843567 KEGG:ath:AT1G72350 TAIR:At1g72350 InParanoid:Q9C9D4
OMA:NEMAMAD PhylomeDB:Q9C9D4 ProtClustDB:CLSN2679559
ArrayExpress:Q9C9D4 Genevestigator:Q9C9D4 Uniprot:Q9C9D4
Length = 224
Score = 132 (51.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 32/73 (43%), Positives = 49/73 (67%)
Query: 4 KKTKGRQKIE----MI-----ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
K TKGRQKIE M+ +TFSKRRS ++K A+EL L G++I I+ FS+ + Y+F
Sbjct: 39 KTTKGRQKIEIKEIMLETRRQVTFSKRRSGLFKKAAELSVLCGAQIGIITFSRCDRIYSF 98
Query: 55 GHPSVEAVANRFL 67
G+ V ++ +++L
Sbjct: 99 GN--VNSLIDKYL 109
>TAIR|locus:2121070 [details] [associations]
symbol:AGL21 "AT4G37940" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009556 "microsporogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2683748 EMBL:AF336979 EMBL:AL035538 IPI:IPI00531853
PIR:T05621 RefSeq:NP_195507.1 UniGene:At.28801
ProteinModelPortal:Q9SZJ6 SMR:Q9SZJ6 IntAct:Q9SZJ6 STRING:Q9SZJ6
EnsemblPlants:AT4G37940.1 GeneID:829950 KEGG:ath:AT4G37940
GeneFarm:3544 TAIR:At4g37940 InParanoid:Q9SZJ6 OMA:DDESHTQ
PhylomeDB:Q9SZJ6 ArrayExpress:Q9SZJ6 Genevestigator:Q9SZJ6
GermOnline:AT4G37940 Uniprot:Q9SZJ6
Length = 228
Score = 116 (45.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
+TFSKRR + K A EL L +E+ +++FS +GK Y F S+++V +R+
Sbjct: 19 VTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRY 69
Score = 48 (22.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 77 IHSLVVGHRQVR--------INELNQQHNELRRQLDEEK-EQEKILTQ 115
+H+L HRQ+ +NELN N++ L + +E++LTQ
Sbjct: 100 LHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQ 147
>TAIR|locus:2041233 [details] [associations]
symbol:SVP "AT2G22540" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;RCA] [GO:0009910 "negative regulation
of flower development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048438 "floral whorl development" evidence=IGI]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=IDA] [GO:0009266 "response to temperature stimulus"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010076 "maintenance of floral
meristem identity" evidence=IGI] [GO:0010582 "floral meristem
determinacy" evidence=IGI] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0045892
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
GO:GO:0009910 GO:GO:0010582 GO:GO:0048438 GO:GO:0010076
EMBL:AC006592 GO:GO:0009266 GO:GO:0000900 OMA:CSSSMKE EMBL:AF211171
EMBL:EU078686 IPI:IPI00536448 IPI:IPI00549063 IPI:IPI00938617
RefSeq:NP_001154528.1 RefSeq:NP_179840.2 UniGene:At.22081
ProteinModelPortal:Q9FVC1 SMR:Q9FVC1 DIP:DIP-33797N IntAct:Q9FVC1
STRING:Q9FVC1 PaxDb:Q9FVC1 PRIDE:Q9FVC1 EnsemblPlants:AT2G22540.1
GeneID:816787 KEGG:ath:AT2G22540 GeneFarm:3510 TAIR:At2g22540
InParanoid:Q9FVC1 PhylomeDB:Q9FVC1 ProtClustDB:CLSN2690861
Genevestigator:Q9FVC1 GermOnline:AT2G22540 Uniprot:Q9FVC1
Length = 240
Score = 129 (50.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 33/108 (30%), Positives = 61/108 (56%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TFSKRR ++K A EL L +++A+++FS +GK + F S++ V R + L +
Sbjct: 19 VTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLER----HNLQSK 74
Query: 76 NIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQ 123
N+ L ++++ E N H + +++ ++ + L QMR G+E Q
Sbjct: 75 NLEKLDQPSLELQLVE-NSDHARMSKEIADKSHR---LRQMR-GEELQ 117
>UNIPROTKB|Q9XJ66 [details] [associations]
symbol:MADS22 "MADS-box transcription factor 22"
species:39947 "Oryza sativa Japonica Group" [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009908
"flower development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009908
GO:GO:0009910 GO:GO:0048510 GO:GO:0010582 GO:GO:0048438
GO:GO:0010076 GO:GO:0010077 GO:GO:0009266 GO:GO:0000900
EMBL:AB003322 EMBL:AB107957 EMBL:AP004159 RefSeq:NP_001048193.1
UniGene:Os.4171 ProteinModelPortal:Q9XJ66 IntAct:Q9XJ66
STRING:Q9XJ66 EnsemblPlants:LOC_Os02g52340.1 GeneID:4330805
KEGG:osa:4330805 Gramene:Q9XJ66 OMA:CSSSMKE ProtClustDB:CLSN2693232
Uniprot:Q9XJ66
Length = 228
Score = 126 (49.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 47/161 (29%), Positives = 78/161 (48%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF-LGMNQLPN 74
+TFSKRR ++K A EL L +++A++VFS +GK F S+ + +++ N L
Sbjct: 19 VTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYNTHSNNLGK 78
Query: 75 DNIHSLVVGHRQVRINELNQQHNE----LRRQLDEEKEQEKI--LTQMRRGKETQPRMWE 128
SL + + LN+Q E LR+ EE E I L Q+ + E
Sbjct: 79 AEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVM 138
Query: 129 TPVDEHNLQE--QLQMDSAFMLGELDLLWKPQLSKYIIEPA 167
D+ +++ +LQ S+ L E ++ + Q+S+ I PA
Sbjct: 139 LTKDQQFMEQISELQRKSS-QLAEENMQLRNQVSQ--ISPA 176
>UNIPROTKB|Q5K4R0 [details] [associations]
symbol:MADS47 "MADS-box transcription factor 47"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009742 "brassinosteroid mediated signaling
pathway" evidence=IMP] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0009742
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009910 GO:GO:0010582
GO:GO:0048438 GO:GO:0010076 GO:GO:0009266 GO:GO:0000900
EMBL:AY345221 EMBL:AY345222 EMBL:AJ536158 EMBL:AC125471
EMBL:AJ293816 RefSeq:NP_001049203.2 UniGene:Os.22281
ProteinModelPortal:Q5K4R0 IntAct:Q5K4R0 GeneID:4331872
KEGG:osa:4331872 Gramene:Q5K4R0 Uniprot:Q5K4R0
Length = 246
Score = 125 (49.1 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TFSKRR ++K A EL L +E+ +VVFS +GK + F S+E + +R+
Sbjct: 38 VTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRY--------- 88
Query: 76 NIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQ----PRMWETPV 131
N HS + + +L + + +L EE + + + RG+E ++ E
Sbjct: 89 NSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEK 148
Query: 132 D-EHNLQEQLQMDSAFMLGELDLLWKPQL 159
E L L+ S +L E+D L + ++
Sbjct: 149 SLESGLGSVLKTKSKKILDEIDGLERKRM 177
>SGD|S000004646 [details] [associations]
symbol:MCM1 "Transcription factor involved in both repression
and activation" species:4932 "Saccharomyces cerevisiae" [GO:0003688
"DNA replication origin binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006525 "arginine metabolic process" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IMP;IPI] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IMP;IDA]
[GO:0044377 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding, bending" evidence=IDA;IMP]
[GO:0090282 "positive regulation of transcription involved in
G2/M-phase of mitotic cell cycle" evidence=IMP] [GO:0006270 "DNA
replication initiation" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0001133 "sequence-specific
transcription regulatory region DNA binding RNA polymerase II
transcription factor recruiting transcription factor activity"
evidence=IDA;IPI] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IDA;IPI] [GO:0001198
"negative regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0001197 "positive regulation of mating-type
specific transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0031494 "regulation of mating type switching"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:1900465 "negative regulation of arginine
catabolic process by negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:1900466 "positive
regulation of arginine biosynthetic process by positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 SGD:S000004646 GO:GO:0001078
GO:GO:0003688 GO:GO:0001077 EMBL:BK006946 GO:GO:0000790
GO:GO:0006270 eggNOG:COG5068 SUPFAM:SSF55455 EMBL:Z48502
GO:GO:0006525 GeneTree:ENSGT00400000022158 OrthoDB:EOG4P2TC4
GO:GO:0001102 GO:GO:0001133 GO:GO:0090282 GO:GO:0001197 KO:K12412
EMBL:X52453 EMBL:X14187 EMBL:M17511 EMBL:AY557985 PIR:A34599
RefSeq:NP_013757.1 PDB:1MNM PDBsum:1MNM ProteinModelPortal:P11746
SMR:P11746 DIP:DIP-72N IntAct:P11746 MINT:MINT-478633 STRING:P11746
PaxDb:P11746 EnsemblFungi:YMR043W GeneID:855060 KEGG:sce:YMR043W
CYGD:YMR043w OMA:CLNAPDD EvolutionaryTrace:P11746 NextBio:978315
Genevestigator:P11746 GermOnline:YMR043W GO:GO:0044377
GO:GO:1900465 GO:GO:0001198 GO:GO:1900466 GO:GO:0031494
Uniprot:P11746
Length = 286
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMN 70
+TFSKR+ I K A EL LTG+++ ++V S++G YTF P E + + G N
Sbjct: 34 VTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQQEGRN 88
Score = 51 (23.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 19/83 (22%), Positives = 43/83 (51%)
Query: 60 EAVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRG 119
+ V ++ LG PN N S++ +Q + + N Q + ++Q +++ ++ ++Q R
Sbjct: 160 QEVKSQLLG-GANPNQN--SMI---QQQQHHTQNSQPQQQQQQQPQQQMSQQQMSQHPRP 213
Query: 120 KETQPRMWET-PVDEHNLQEQLQ 141
++ P ++ P + Q+QLQ
Sbjct: 214 QQGIPHPQQSQPQQQQQQQQQLQ 236
Score = 36 (17.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 102 QLDEEKEQEKILTQMRRGKETQP 124
Q ++++Q++ L Q ++ ++ QP
Sbjct: 224 QPQQQQQQQQQLQQQQQQQQQQP 246
>TAIR|locus:2825756 [details] [associations]
symbol:AGL97 "AGAMOUS-like 97" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
eggNOG:KOG0014 EMBL:AC083835 EMBL:AB493500 IPI:IPI00539277
PIR:E96511 RefSeq:NP_175144.1 UniGene:At.65984
ProteinModelPortal:Q9C633 SMR:Q9C633 IntAct:Q9C633 STRING:Q9C633
EnsemblPlants:AT1G46408.1 GeneID:841112 KEGG:ath:AT1G46408
TAIR:At1g46408 HOGENOM:HOG000033848 PhylomeDB:Q9C633
ProtClustDB:CLSN2681906 Genevestigator:Q9C633 Uniprot:Q9C633
Length = 266
Score = 125 (49.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/114 (36%), Positives = 58/114 (50%)
Query: 7 KGRQKIEMIITFSKRRSWIYKNASELVTLTGSEIAIV---VFSQSGKP-YTFGHPSVEAV 62
K + K ++FSKRR +Y ASEL L+ +EIAI+ V S S Y+FGH SV+ V
Sbjct: 12 KIQNKNPRAVSFSKRRKGLYSKASELCLLSDAEIAIIATPVSSNSNAAFYSFGHSSVDNV 71
Query: 63 ANRFLGMNQLPNDNI-----HSLVVGHRQVRINELNQQHNELRRQLDEEKEQEK 111
FL NQ P D SL+ + + EL + + + L + KE EK
Sbjct: 72 VAAFLA-NQRPCDERFWWEDESLL---KSENLEELREAMDSMSTMLRDLKELEK 121
>UNIPROTKB|Q9ATF2 [details] [associations]
symbol:FBP5 "MADS-box transcription factor FBP5"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335235 ProteinModelPortal:Q9ATF2 IntAct:Q9ATF2
Uniprot:Q9ATF2
Length = 246
Score = 124 (48.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/142 (29%), Positives = 68/142 (47%)
Query: 7 KGRQKIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
K KI +TF+KRR+ + K A EL L +E+A+++FS GK Y F S N
Sbjct: 10 KIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYEFSSTS-----NMV 64
Query: 67 LGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQPRM 126
+++ + +L V HR V+ N + + E + + + ++ Q+ G E P
Sbjct: 65 KTLDRYQKCSYGTLEVNHRSVKDNNEERIYREYLKLKAKYESLQRYQRQLL-GDELGP-- 121
Query: 127 WETPVDEHNLQEQLQMDSAFML 148
+DE E LQ+DS+ L
Sbjct: 122 --LNIDELEHLE-LQLDSSLKL 140
>UNIPROTKB|Q9ATE3 [details] [associations]
symbol:FBP28 "MADS-box transcription factor FBP28"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335244 ProteinModelPortal:Q9ATE3 IntAct:Q9ATE3
Uniprot:Q9ATE3
Length = 215
Score = 109 (43.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
+TFSKRR+ + K A EL L +E+++++FS GK Y F S++ + R+
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVSLIIFSTRGKLYEFSSSSMQEIIERY 69
Score = 52 (23.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 110 EKILTQMRRGKETQPRMWETPVDEHNLQEQLQMDSAFMLGELDLL 154
++I+ + RR E E P E N + L++D+A ++ ++++L
Sbjct: 63 QEIIERYRRHSEDV--QGEKPAVEQNNMQNLKLDAASLMKKIEIL 105
>TAIR|locus:2043600 [details] [associations]
symbol:AGL6 "AT2G45650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0048437 "floral organ development" evidence=IMP] [GO:0009911
"positive regulation of flower development" evidence=IMP]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009911 eggNOG:COG5068
GO:GO:0010228 SUPFAM:SSF55455 EMBL:M55554 EMBL:AC003680
IPI:IPI00531522 PIR:F39534 RefSeq:NP_182089.1 UniGene:At.512
ProteinModelPortal:P29386 SMR:P29386 IntAct:P29386 STRING:P29386
EnsemblPlants:AT2G45650.1 GeneID:819173 KEGG:ath:AT2G45650
GeneFarm:3546 TAIR:At2g45650 InParanoid:P29386 KO:K09264
OMA:KERQLGD PhylomeDB:P29386 ProtClustDB:CLSN2913049
Genevestigator:P29386 GO:GO:0048437 Uniprot:P29386
Length = 252
Score = 123 (48.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
KI +TFSKRR+ + K A EL L +E+A+++FS GK Y FG +E+ R+
Sbjct: 14 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERY 69
>WB|WBGene00006844 [details] [associations]
symbol:unc-120 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0030163 "protein catabolic process"
evidence=IMP] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006355 GO:GO:0003677 GO:GO:0040011
GO:GO:0000003 GO:GO:0006351 GO:GO:0030163 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11831 GeneTree:ENSGT00400000022158
EMBL:Z75710 PIR:T20313 RefSeq:NP_492296.1 ProteinModelPortal:Q18955
SMR:Q18955 DIP:DIP-26080N MINT:MINT-1058826 STRING:Q18955
PaxDb:Q18955 EnsemblMetazoa:D1081.2 GeneID:172636
KEGG:cel:CELE_D1081.2 UCSC:D1081.2 CTD:172636 WormBase:D1081.2
HOGENOM:HOG000019738 InParanoid:Q18955 OMA:NGGNGMR NextBio:876363
Uniprot:Q18955
Length = 327
Score = 124 (48.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKTKGR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YT+
Sbjct: 42 KKTKGRVKIKMEYINNKLRRYTTFSKRKTGIMKKAFELSTLTGTQVMLLVASETGHVYTY 101
Query: 55 GHPSVEAVANRFLG 68
P ++ + + G
Sbjct: 102 ATPKLQPMISSDTG 115
>FB|FBgn0004101 [details] [associations]
symbol:bs "blistered" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007424 "open tracheal
system development" evidence=IEP;NAS;TAS] [GO:0007430 "terminal
branching, open tracheal system" evidence=NAS;IMP;TAS] [GO:0007475
"apposition of dorsal and ventral imaginal disc-derived wing
surfaces" evidence=IMP] [GO:0035220 "wing disc development"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=NAS;IMP;TAS] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0035209 "pupal development"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0045165 "cell fate commitment" evidence=TAS] [GO:0035154
"terminal cell fate specification, open tracheal system"
evidence=TAS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0008586
"imaginal disc-derived wing vein morphogenesis" evidence=IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030431 "sleep"
evidence=IMP] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 EMBL:AE013599
GO:GO:0005634 GO:GO:0003677 GO:GO:0030431 GO:GO:0008586
GO:GO:0045944 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
GeneTree:ENSGT00400000022158 GO:GO:0007475 ChiTaRS:BLM
GO:GO:0002168 GO:GO:0007430 GO:GO:0035209 EMBL:X77532 EMBL:AY095071
PIR:S42825 RefSeq:NP_726438.1 UniGene:Dm.3381
ProteinModelPortal:Q24535 SMR:Q24535 STRING:Q24535 PaxDb:Q24535
EnsemblMetazoa:FBtr0072271 GeneID:37890 KEGG:dme:Dmel_CG3411
CTD:12213 FlyBase:FBgn0004101 InParanoid:Q24535 OrthoDB:EOG4T76KF
PhylomeDB:Q24535 GenomeRNAi:37890 NextBio:805887 Bgee:Q24535
GermOnline:CG3411 GO:GO:0035154 Uniprot:Q24535
Length = 449
Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/122 (33%), Positives = 64/122 (52%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKTKGR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 162 KKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTF 221
Query: 55 G----HPSVEAVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQL-DEEKEQ 109
P + + A + L L + + S VG R++ + EL + DE+ +
Sbjct: 222 ATRKLQPMITSEAGKQLIQTCLNSPDPPS--VGGGDQRMSATGFEETELSYNIADEDSKD 279
Query: 110 EK 111
++
Sbjct: 280 DR 281
>TAIR|locus:2082618 [details] [associations]
symbol:AGL16 "AGAMOUS-like 16" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010440 "stomatal lineage progression" evidence=IMP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0042803 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
EMBL:AY141209 EMBL:BT030046 EMBL:AF312662 IPI:IPI00522001
IPI:IPI01027879 RefSeq:NP_191282.2 UniGene:At.21102 HSSP:Q02078
ProteinModelPortal:A2RVQ5 SMR:A2RVQ5 IntAct:A2RVQ5 STRING:A2RVQ5
PRIDE:A2RVQ5 EnsemblPlants:AT3G57230.1 GeneID:824890
KEGG:ath:AT3G57230 GeneFarm:3515 TAIR:At3g57230 InParanoid:A2RVQ5
OMA:ASEIQFW PhylomeDB:A2RVQ5 ProtClustDB:CLSN2680436
ArrayExpress:A2RVQ5 Genevestigator:A2RVQ5 GO:GO:0010440
Uniprot:A2RVQ5
Length = 240
Score = 122 (48.0 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFL---GMNQL 72
+TFSKRR+ + K A EL L +E+ +++FS +G+ Y F S+++V R+ G
Sbjct: 19 VTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSS 78
Query: 73 PNDNIHSLVVGHRQVRINELNQQHN--ELRRQLDEEK 107
ND + ++ I + Q HN E RQ+ E+
Sbjct: 79 ENDPASEIQFWQKEAAILK-RQLHNLQENHRQMMGEE 114
>TAIR|locus:2082613 [details] [associations]
symbol:AGL18 "AGAMOUS-like 18" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0048577 "negative regulation of
short-day photoperiodism, flowering" evidence=IMP] [GO:0009555
"pollen development" evidence=IMP] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0043481 "anthocyanin accumulation in
tissues in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL137080 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910
GO:GO:0048577 HSSP:Q02078 EMBL:AF312663 EMBL:AK220679 EMBL:AK222220
EMBL:BT025774 EMBL:AY087639 IPI:IPI00519883 IPI:IPI00530471
IPI:IPI01027882 PIR:T45817 RefSeq:NP_191298.1 RefSeq:NP_974450.1
UniGene:At.24026 ProteinModelPortal:Q9M2K8 SMR:Q9M2K8 PRIDE:Q9M2K8
EnsemblPlants:AT3G57390.1 GeneID:824906 KEGG:ath:AT3G57390
GeneFarm:3514 TAIR:At3g57390 InParanoid:Q9M2K8 OMA:TASTEHK
PhylomeDB:Q9M2K8 ProtClustDB:CLSN2684553 Genevestigator:Q9M2K8
Uniprot:Q9M2K8
Length = 256
Score = 122 (48.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 10 QKIEMI----ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANR 65
+KIE I +TFSKRR+ + K A EL L +E+A+++FS +GK Y F +E + +R
Sbjct: 9 KKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVCMEQILSR 68
Query: 66 FLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRR--GKETQ 123
+ G + H H Q+ I + LR + E E++ + R GKE +
Sbjct: 69 Y-GYTTASTE--HKQQREH-QLLICASHGNEAVLRNDDSMKGELERLQLAIERLKGKELE 124
Query: 124 PRMWETPVD-EHNLQEQL 140
+ + E+ L E L
Sbjct: 125 GMSFPDLISLENQLNESL 142
>POMBASE|SPAC11E3.06 [details] [associations]
symbol:map1 "MADS-box transcription factor Map1"
species:4896 "Schizosaccharomyces pombe" [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=NAS] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0001197 "positive regulation of
mating-type specific transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IC;IDA] [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IMP] [GO:0010514
"induction of conjugation with cellular fusion" evidence=IMP]
[GO:0036003 "positive regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IMP]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0075296 "positive regulation of ascospore formation"
evidence=IMP] [GO:0090028 "positive regulation of
pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
PomBase:SPAC11E3.06 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000978 GO:GO:0000982
eggNOG:COG5068 SUPFAM:SSF55455 OrthoDB:EOG4P2TC4 GO:GO:0010514
GO:GO:0090028 GO:GO:0036003 EMBL:D78483 EMBL:L77973 PIR:T43225
PIR:T43415 RefSeq:NP_594931.1 ProteinModelPortal:P78926
EnsemblFungi:SPAC11E3.06.1 GeneID:2541765 KEGG:spo:SPAC11E3.06
NextBio:20802856 GO:GO:0075296 GO:GO:0001197 Uniprot:P78926
Length = 398
Score = 123 (48.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 9 RQKIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLG 68
RQK + TF+KR++ I+K A+EL LTGSE+ ++V S++G +TF P +E V G
Sbjct: 31 RQKRQN--TFTKRKAGIFKKANELALLTGSEVMVLVVSETGLVHTFSTPKLENVVKSPEG 88
Query: 69 MNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQP 124
+L +++ + + + ++ Q +L D E +MR +E P
Sbjct: 89 Q-KLITESLINATTDQNESQASQAKQSSAQLS---DSESGYPLDHEEMRISEENGP 140
>TAIR|locus:2127213 [details] [associations]
symbol:AGL19 "AGAMOUS-like 19" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010048 "vernalization response" evidence=RCA;IMP] [GO:0048510
"regulation of timing of transition from vegetative to reproductive
phase" evidence=IMP] [GO:0043481 "anthocyanin accumulation in
tissues in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2685538 GO:GO:0009908 EMBL:AF312664 EMBL:AL031018
EMBL:AL161558 EMBL:AY142523 IPI:IPI00538138 PIR:T05126
RefSeq:NP_194026.1 UniGene:At.2376 ProteinModelPortal:O82743
SMR:O82743 IntAct:O82743 STRING:O82743 EnsemblPlants:AT4G22950.1
GeneID:828394 KEGG:ath:AT4G22950 GeneFarm:3503 TAIR:At4g22950
InParanoid:O82743 OMA:SSEVNID PhylomeDB:O82743
Genevestigator:O82743 GermOnline:AT4G22950 GO:GO:0048510
GO:GO:0010048 Uniprot:O82743
Length = 219
Score = 115 (45.5 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF------LGM 69
+TFSKRR+ + K A EL L +E+A+V+FS K Y F S+ A R+ +G
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGN 78
Query: 70 NQLPNDN 76
N NDN
Sbjct: 79 NHKRNDN 85
Score = 35 (17.4 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 89 INELNQQHNELRRQL 103
I EL Q N+L R L
Sbjct: 120 IEELQQLENQLDRSL 134
>TAIR|locus:2137070 [details] [associations]
symbol:AGL14 "AGAMOUS-like 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 EMBL:AL078606 EMBL:AL161532 EMBL:U20184
IPI:IPI00525134 PIR:T09347 RefSeq:NP_192925.1 UniGene:At.42992
ProteinModelPortal:Q38838 SMR:Q38838 IntAct:Q38838 STRING:Q38838
EnsemblPlants:AT4G11880.1 GeneID:826795 KEGG:ath:AT4G11880
GeneFarm:3502 TAIR:At4g11880 InParanoid:Q38838 OMA:RTYTREN
PhylomeDB:Q38838 ProtClustDB:CLSN2685538 Genevestigator:Q38838
GermOnline:AT4G11880 Uniprot:Q38838
Length = 221
Score = 112 (44.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS-----VEAVANRF--LG 68
+TFSKRR+ + K A EL L +E+A+++FS GK Y F S VE R LG
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLG 78
Query: 69 MNQLPNDN 76
N NDN
Sbjct: 79 SNHKRNDN 86
Score = 41 (19.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 89 INELNQQHNELRRQLDE--EKEQEKILTQMRRGKETQPRMWETPVDEHNLQEQLQMDSAF 146
I EL Q N+L R L + K+ + + + + KE + + + L E+ +M
Sbjct: 121 IEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLI---AENKMLMEKCEMQGRG 177
Query: 147 MLGEL 151
++G +
Sbjct: 178 IIGRI 182
>TAIR|locus:2098826 [details] [associations]
symbol:AGL13 "AGAMOUS-like 13" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL137898
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:U20183
IPI:IPI00520452 PIR:T47904 RefSeq:NP_191671.1 UniGene:At.968
ProteinModelPortal:Q38837 SMR:Q38837 IntAct:Q38837 STRING:Q38837
PRIDE:Q38837 EnsemblPlants:AT3G61120.1 GeneID:825284
KEGG:ath:AT3G61120 GeneFarm:3547 TAIR:At3g61120 InParanoid:Q38837
OMA:KLETEDH PhylomeDB:Q38837 ProtClustDB:CLSN2915737
Genevestigator:Q38837 GermOnline:AT3G61120 Uniprot:Q38837
Length = 244
Score = 121 (47.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGM- 69
KI +TFSKR+S + K A EL L +E+++++FS GK Y F + V R+
Sbjct: 14 KITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYRCK 73
Query: 70 -NQLPNDNIHSLVVGHRQVRINELNQQHNELRR 101
N L ND + G RQ + +L ++ L R
Sbjct: 74 DNLLDNDTLED-TQGLRQ-EVTKLKCKYESLLR 104
>TAIR|locus:2184427 [details] [associations]
symbol:AGL99 "AGAMOUS-like 99" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000033848 ProtClustDB:CLSN2681906 EMBL:AL162875
EMBL:DQ056669 IPI:IPI00538160 PIR:T48460 RefSeq:NP_196084.1
UniGene:At.54720 ProteinModelPortal:Q9LZ61 SMR:Q9LZ61 IntAct:Q9LZ61
STRING:Q9LZ61 EnsemblPlants:AT5G04640.1 GeneID:830341
KEGG:ath:AT5G04640 TAIR:At5g04640 eggNOG:NOG275504 OMA:RDAMDSM
PhylomeDB:Q9LZ61 Genevestigator:Q9LZ61 Uniprot:Q9LZ61
Length = 322
Score = 122 (48.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 10 QKIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKP----YTFGHPSVEAVANR 65
+K + FSKR +Y AS+L L+ ++IAI+ S K YTFGH SV+ V
Sbjct: 15 KKDSRAVAFSKRSRGLYSKASDLCLLSDAQIAIIATPVSSKSNVSFYTFGHSSVDNVVAA 74
Query: 66 FLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQ 123
FL NQ P + + L R+++ ++ ELR +D + K L ++ ++ +
Sbjct: 75 FL-TNQRPREGL-GLDYWWEDERLSK-SEDLEELRDAMDSMSKMLKDLKDLQNQRDCE 129
>TAIR|locus:2032372 [details] [associations]
symbol:SEP3 "SEPALLATA3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=RCA;IMP] [GO:0010093 "specification of floral organ
identity" evidence=RCA;IMP] [GO:0009908 "flower development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048481 "ovule development" evidence=RCA;IMP] [GO:0048833
"specification of floral organ number" evidence=IMP] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0001708 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0010093 GO:GO:0048481 GO:GO:0048833
EMBL:AC002396 EMBL:AF015552 EMBL:AY088272 EMBL:AK118696
IPI:IPI00516255 IPI:IPI00534499 PIR:T00656 RefSeq:NP_564214.2
RefSeq:NP_850953.1 UniGene:At.24086 ProteinModelPortal:O22456
SMR:O22456 IntAct:O22456 STRING:O22456 PaxDb:O22456 PRIDE:O22456
EnsemblPlants:AT1G24260.2 GeneID:839040 KEGG:ath:AT1G24260
GeneFarm:3497 TAIR:At1g24260 InParanoid:O22456 OMA:PLECEPI
PhylomeDB:O22456 ProtClustDB:CLSN2690422 Genevestigator:O22456
GermOnline:AT1G24260 Uniprot:O22456
Length = 251
Score = 119 (46.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 45/156 (28%), Positives = 78/156 (50%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF-GHPSVEAVANRFLGM 69
KI +TF+KRR+ + K A EL L +E+A+++FS GK Y F S+ R+
Sbjct: 14 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKC 73
Query: 70 NQ-LPNDNIHSLVVGHRQVRINELN--QQHNELRRQLDE-EKEQEKILTQMRRGKETQP- 124
N P N+ S R+ EL+ Q++ +L+ + D ++ Q +L + T+
Sbjct: 74 NYGAPEPNVPS-----REALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKEL 128
Query: 125 RMWETPVDEHNLQEQLQMDSAFMLGEL-DLLWKPQL 159
E +D +L++ + + FML +L DL K ++
Sbjct: 129 ESLERQLDS-SLKQIRALRTQFMLDQLNDLQSKERM 163
>TAIR|locus:2177125 [details] [associations]
symbol:AGL15 "AGAMOUS-like 15" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA;TAS]
[GO:0060862 "negative regulation of floral organ abscission"
evidence=IMP] [GO:0010047 "fruit dehiscence" evidence=IMP]
[GO:0060867 "fruit abscission" evidence=IMP] [GO:2000692 "negative
regulation of seed maturation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;IDA]
[GO:0071365 "cellular response to auxin stimulus" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048577
"negative regulation of short-day photoperiodism, flowering"
evidence=IMP] [GO:0010262 "somatic embryogenesis" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IDA;TAS] [GO:0045487 "gibberellin catabolic
process" evidence=TAS] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0009556 "microsporogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0052543 "callose
deposition in cell wall" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0045893 GO:GO:0042803 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0010047 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:U22528 EMBL:AB011484
EMBL:AB005230 EMBL:U20185 IPI:IPI00536362 PIR:S71200
RefSeq:NP_196883.1 UniGene:At.28675 ProteinModelPortal:Q38847
SMR:Q38847 IntAct:Q38847 STRING:Q38847 EnsemblPlants:AT5G13790.1
GeneID:831224 KEGG:ath:AT5G13790 GeneFarm:3513 TAIR:At5g13790
InParanoid:Q38847 OMA:LYHALIT PhylomeDB:Q38847
ProtClustDB:CLSN2916614 Genevestigator:Q38847 GermOnline:AT5G13790
GO:GO:0071365 GO:GO:0009908 GO:GO:0060867 GO:GO:0045487
GO:GO:0060862 GO:GO:0009910 GO:GO:2000692 GO:GO:0048577
GO:GO:0010262 Uniprot:Q38847
Length = 268
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 39/161 (24%), Positives = 85/161 (52%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TFSKRRS + K A EL L +E+A++VFS+SGK + + ++ +R+ G +Q +
Sbjct: 19 VTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRY-GNHQSSSA 77
Query: 76 NIHSLVVGHRQV---RINELNQQHNELR-RQLDEE--KEQEKILTQMRRG----KETQPR 125
+ + ++++L ++H +L+ + L+ KE + + Q+ +E + R
Sbjct: 78 SKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKER 137
Query: 126 MWETPVDEHNLQEQ-LQMDSAFMLGELDLL--WKPQLSKYI 163
+ ++E L+EQ ++++ + ++ L + P + Y+
Sbjct: 138 LLTNQLEESRLKEQRAELENETLRRQVQELRSFLPSFTHYV 178
>UNIPROTKB|Q9ZS29 [details] [associations]
symbol:GAGA2 "MADS-box protein, GAGA2" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009723 ProteinModelPortal:Q9ZS29 IntAct:Q9ZS29
Uniprot:Q9ZS29
Length = 246
Score = 106 (42.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 1 MAAKKTKGRQKIEMI---------ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKP 51
M+ ++ GR KIE+ +TF KRR+ + K A EL L +E+A++VFS G+
Sbjct: 10 MSPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRL 69
Query: 52 YTFGHPSVEAVANRF 66
Y + + SV+ +R+
Sbjct: 70 YEYANNSVKGTIDRY 84
Score = 47 (21.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 19/91 (20%), Positives = 42/91 (46%)
Query: 58 SVEAVANRFLGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMR 117
++E+ + +G + + I + + Q R NEL+ + LR ++ E + ++ ++ M
Sbjct: 145 NLESKLEKGIGKIRSKKNEILFAEIEYMQKRENELHNSNQFLRSKIAENERAQQHMSLMP 204
Query: 118 RGKETQPRMWETPVDEHN-LQ-EQLQMDSAF 146
+ + P D N LQ LQ ++ +
Sbjct: 205 GSSDYELVAPHQPFDGRNYLQVNDLQPNNNY 235
>UNIPROTKB|Q40882 [details] [associations]
symbol:fbp11 "Fbp11 protein" species:4102 "Petunia x
hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:X81852
ProteinModelPortal:Q40882 IntAct:Q40882 Uniprot:Q40882
Length = 228
Score = 101 (40.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
+TF KRR+ + K A EL L +EIA++VFS G+ Y + + +++ R+
Sbjct: 19 VTFCKRRNGLLKKAYELSVLCDAEIALIVFSTRGRVYEYANNNIKGTIERY 69
Score = 53 (23.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 72 LPNDNIHSLVVGHRQVRINELNQQHNELRRQLDE--EKEQEKILTQ 115
L N N H + G + + EL Q N L R + K+ E IL +
Sbjct: 104 LQNTNRHLVGEGLSALNVRELKQLENRLERGITRIRSKKHEMILAE 149
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/77 (19%), Positives = 34/77 (44%)
Query: 74 NDNIHSLVVGHRQVRINELNQ-QHNELRRQLDEEKEQEKILTQMRRGKETQPRMWETPVD 132
N+NI + +++ N EL Q ++ E +K+ Q++ + T + +
Sbjct: 59 NNNIKGTIERYKKATAETSNACTTQELNAQFYQQ-ESKKLRQQIQLLQNTNRHLVGEGLS 117
Query: 133 EHNLQEQLQMDSAFMLG 149
N++E Q+++ G
Sbjct: 118 ALNVRELKQLENRLERG 134
Score = 36 (17.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 86 QVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKE 121
Q R +L Q++ LR ++ E + +++ G+E
Sbjct: 154 QKREIQLEQENTFLRSKIAENERLQELSMMPATGQE 189
>TAIR|locus:2029411 [details] [associations]
symbol:AGL67 "AGAMOUS-like 67" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009686
"gibberellin biosynthetic process" evidence=RCA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 EMBL:CP002684 GO:GO:0005829
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 IPI:IPI00544332 RefSeq:NP_001117616.1
RefSeq:NP_177918.2 UniGene:At.34362 UniGene:At.52553
ProteinModelPortal:F4I8L6 SMR:F4I8L6 EnsemblPlants:AT1G77950.1
EnsemblPlants:AT1G77950.2 GeneID:844130 KEGG:ath:AT1G77950
OMA:CEANLIN ArrayExpress:F4I8L6 Uniprot:F4I8L6
Length = 252
Score = 118 (46.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 38/130 (29%), Positives = 68/130 (52%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF-GHPSVEAVANRFLGMNQLPN 74
ITFSKR+ + K A EL TL ++A+++FS S + F G +E V R++ +
Sbjct: 19 ITFSKRKKGLIKKAYELSTLCDIDLALLMFSPSDRLCLFSGQTRIEDVLARYINLPDQER 78
Query: 75 DNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMR--RGKETQPRMWETPVD 132
+N ++V + R N+++ L R L++ K ++ + Q+ R + T + E +
Sbjct: 79 EN--AIVFPDQSKRQGIQNKEY--LLRTLEKLKIEDDMALQINEPRPEATNSNVEELEQE 134
Query: 133 EHNLQEQLQM 142
LQ+QLQ+
Sbjct: 135 VCRLQQQLQI 144
>UNIPROTKB|Q10CQ1 [details] [associations]
symbol:MADS14 "MADS-box transcription factor 14"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:DP000009 EMBL:AP008209 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 KO:K09264 EMBL:AF377947 EMBL:AC135225 EMBL:AC092556
EMBL:AF058697 EMBL:AB041020 EMBL:AY332478 EMBL:AY551916
RefSeq:NP_001051300.1 UniGene:Os.2348 ProteinModelPortal:Q10CQ1
IntAct:Q10CQ1 EnsemblPlants:LOC_Os03g54160.2 GeneID:4334140
KEGG:osa:4334140 Gramene:Q10CQ1 ProtClustDB:CLSN2694303
Uniprot:Q10CQ1
Length = 246
Score = 109 (43.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS-VEAVANRF 66
KI +TFSKRRS + K A+E+ L +E+A+++FS GK Y + S ++ + R+
Sbjct: 14 KINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERY 70
Score = 40 (19.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 89 INELNQQHNELRRQLDEEKEQEKILTQMRRGKETQPRMWETPVDEHNLQEQLQMDSAFML 148
INEL ++ L+ +E K +K L + ++ ++ Q + W D+ Q S+FM+
Sbjct: 151 INELQRKEKSLQ---EENKVLQKELVEKQKVQKQQVQ-W----DQTQPQTS-SSSSSFMM 201
Query: 149 GE 150
E
Sbjct: 202 RE 203
>UNIPROTKB|Q6EUV6 [details] [associations]
symbol:grcd3 "MADS domain protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AJ784157
ProteinModelPortal:Q6EUV6 IntAct:Q6EUV6 Uniprot:Q6EUV6
Length = 247
Score = 117 (46.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMN 70
KI +TFSKRR+ + K A EL L +E+ +++FS K Y FG V R+
Sbjct: 14 KINRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSSRDKLYEFGSVGVMKTLERYQRCC 73
Query: 71 QLPNDNIHSLVVGHRQVRINELNQQHNELRRQ----LDEE------KEQEKILTQMRRGK 120
P DN + +++L + L+R L E+ KE + Q+ G
Sbjct: 74 FNPQDNNNERETQSWYQEVSKLKAKFESLQRTQRHLLGEDLGPLSVKELHNLEKQLE-GA 132
Query: 121 ETQPRMWETPVDEHNLQEQLQMDSAFMLGELDLLWKPQLS 160
TQ R +T + ++E + + LG+++ K ++S
Sbjct: 133 LTQARQRKTQIMVEQMEELRRKERE--LGDMNKHLKIKVS 170
>TAIR|locus:2033273 [details] [associations]
symbol:AP1 "AT1G69120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0009908 "flower development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0010076 "maintenance
of floral meristem identity" evidence=IGI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0009556 "microsporogenesis" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010093
"specification of floral organ identity" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0052543 "callose deposition in cell
wall" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008262 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076
UniGene:At.10200 KO:K09264 GO:GO:0048830 GO:GO:0010093 EMBL:Z16421
EMBL:BT004113 EMBL:BT004951 EMBL:AK175933 EMBL:AY087956
EMBL:AF466771 EMBL:AF466772 EMBL:AF466773 EMBL:AF466774
EMBL:AF466775 EMBL:AF466776 EMBL:AF466777 EMBL:AF466778
EMBL:AF466779 EMBL:AF466780 EMBL:AF466781 EMBL:AF466782
EMBL:AF466783 EMBL:AF466784 EMBL:AF466785 IPI:IPI00543034
PIR:S27109 RefSeq:NP_177074.1 UniGene:At.24302
ProteinModelPortal:P35631 SMR:P35631 IntAct:P35631 STRING:P35631
EnsemblPlants:AT1G69120.1 GeneID:843244 KEGG:ath:AT1G69120
GeneFarm:3482 TAIR:At1g69120 InParanoid:P35631 OMA:LMYESIN
PhylomeDB:P35631 ProtClustDB:CLSN2682513 Genevestigator:P35631
GermOnline:AT1G69120 GO:GO:0009933 Uniprot:P35631
Length = 256
Score = 117 (46.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS-VEAVANRFLGM 69
KI +TFSKRR+ + K A E+ L +E+A+VVFS GK + + S +E + R+
Sbjct: 14 KINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERY 73
Query: 70 NQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDE-EKEQEKILTQMRRGKETQPRMWE 128
+ L+ V N + ++N L+ +++ E+ Q L G++ Q
Sbjct: 74 SYAERQ----LIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYL-----GEDLQAM--- 120
Query: 129 TPVDEHNLQEQL 140
+P + NL++QL
Sbjct: 121 SPKELQNLEQQL 132
>TAIR|locus:2066050 [details] [associations]
symbol:AGL17 "AGAMOUS-like 17" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048578 "positive regulation of long-day
photoperiodism, flowering" evidence=IMP] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AC006340
EMBL:U20186 IPI:IPI00531185 PIR:H84614 RefSeq:NP_179848.1
UniGene:At.39413 ProteinModelPortal:Q38840 SMR:Q38840 IntAct:Q38840
STRING:Q38840 PRIDE:Q38840 EnsemblPlants:AT2G22630.1 GeneID:816794
KEGG:ath:AT2G22630 GeneFarm:3517 TAIR:At2g22630 InParanoid:Q38840
OMA:GHHELVD PhylomeDB:Q38840 ProtClustDB:CLSN2683748
ArrayExpress:Q38840 Genevestigator:Q38840 GermOnline:AT2G22630
GO:GO:0048578 Uniprot:Q38840
Length = 227
Score = 110 (43.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
+TFSKRR + K A EL L +E+ +++FS + K Y F SV++ RF
Sbjct: 19 VTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERF 69
Score = 35 (17.4 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 77 IHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRR 118
+HSL +RQ+ ELN + + ++ + E +M+R
Sbjct: 100 LHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKR 141
>TAIR|locus:2158039 [details] [associations]
symbol:AT5G49420 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AY141239 EMBL:DQ447056
IPI:IPI00521941 RefSeq:NP_199753.3 UniGene:At.64280
ProteinModelPortal:Q7X9H5 SMR:Q7X9H5 IntAct:Q7X9H5 STRING:Q7X9H5
PRIDE:Q7X9H5 EnsemblPlants:AT5G49420.1 GeneID:835002
KEGG:ath:AT5G49420 TAIR:At5g49420 PhylomeDB:Q7X9H5
ProtClustDB:CLSN2687118 Genevestigator:Q7X9H5 Uniprot:Q7X9H5
Length = 334
Score = 118 (46.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 10 QKIEMI-ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKP----YTFGHPSVEAVAN 64
QK + + +T +KRR +Y AS+L L+ ++IAI+ S + Y+FGH SV+AV +
Sbjct: 17 QKRDSLRVTCTKRREGLYSKASQLCLLSDAQIAILATPPSSESNVSFYSFGHSSVDAVVS 76
Query: 65 RFL-GMNQLPNDN 76
FL G +P DN
Sbjct: 77 AFLSGQRPVPKDN 89
>UNIPROTKB|Q7XUN2 [details] [associations]
symbol:MADS17 "MADS-box transcription factor 17"
species:39947 "Oryza sativa Japonica Group" [GO:0010093
"specification of floral organ identity" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 GO:GO:0010228 SUPFAM:SSF55455
GO:GO:0010093 EMBL:AF109153 EMBL:AY551918 EMBL:AL606688
EMBL:AF095646 ProteinModelPortal:Q7XUN2 IntAct:Q7XUN2
KEGG:dosa:Os04t0580700-01 Gramene:Q7XUN2 Uniprot:Q7XUN2
Length = 249
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMN 70
KI +TFSKRR+ + K A EL L +E+A+++FS GK Y FG + ++
Sbjct: 14 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCC 73
Query: 71 QLPNDNIHSLVVGHRQVRINELNQQHNEL 99
+ +L G Q E+++ +L
Sbjct: 74 YNAQGSNSALAGGEHQSWYQEMSRLKTKL 102
>UNIPROTKB|Q6EU39 [details] [associations]
symbol:MADS6 "MADS-box transcription factor 6"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] [GO:0010022 "meristem determinacy"
evidence=IMP] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0045893 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 GO:GO:0010228
SUPFAM:SSF55455 KO:K09264 GO:GO:0010093 EMBL:AP008208 EMBL:CM000139
GO:GO:0010022 EMBL:U78782 EMBL:FJ666318 EMBL:AP004178 EMBL:AK069103
PIR:T04167 RefSeq:NP_001047749.1 UniGene:Os.7271
ProteinModelPortal:Q6EU39 IntAct:Q6EU39
EnsemblPlants:LOC_Os02g45770.1 GeneID:4330328 KEGG:osa:4330328
Gramene:Q6EU39 OMA:SAGITKT ProtClustDB:CLSN2693070 Uniprot:Q6EU39
Length = 250
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
KI +TFSKRR+ + K A EL L +E+A+++FS GK Y FG + R+
Sbjct: 14 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERY 69
>CGD|CAL0001975 [details] [associations]
symbol:MCM1 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:1900461 "positive regulation of pseudohyphal
growth by positive regulation of transcription from RNA polymerase
II promoter" evidence=IGI;IMP] [GO:2000220 "regulation of
pseudohyphal growth" evidence=IGI;IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001197 "positive regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031494 "regulation of mating type switching" evidence=IEA]
[GO:0090282 "positive regulation of transcription involved in
G2/M-phase of mitotic cell cycle" evidence=IEA] [GO:0006270 "DNA
replication initiation" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900466 "positive
regulation of arginine biosynthetic process by positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:1900465 "negative regulation of arginine catabolic process by
negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0044377 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding, bending" evidence=IEA] [GO:0001133 "sequence-specific
transcription regulatory region DNA binding RNA polymerase II
transcription factor recruiting transcription factor activity"
evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
CGD:CAL0001975 GO:GO:0009405 GO:GO:0003677 GO:GO:0007155
GO:GO:0003700 GO:GO:0006351 GO:GO:0000790 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:AACQ01000024 GO:GO:1900461 GO:GO:0044182
RefSeq:XP_720319.1 RefSeq:XP_888720.1 ProteinModelPortal:Q5AFP3
SMR:Q5AFP3 STRING:Q5AFP3 GeneID:3638050 GeneID:3704001
KEGG:cal:CaO19.7025 KEGG:cal:CaO19_7025 KO:K12412 Uniprot:Q5AFP3
Length = 262
Score = 116 (45.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 9 RQKIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLG 68
++K ITFSKR++ I K A EL LTG+++ ++V S++G YTF P ++ + + G
Sbjct: 69 QEKSRRHITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKSEG 128
Query: 69 MN 70
N
Sbjct: 129 KN 130
>UNIPROTKB|Q5AFP3 [details] [associations]
symbol:MCM1 "Transcription factor of morphogenesis MCM1"
species:237561 "Candida albicans SC5314" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900461 "positive regulation of pseudohyphal
growth by positive regulation of transcription from RNA polymerase
II promoter" evidence=IGI] [GO:2000220 "regulation of pseudohyphal
growth" evidence=IGI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 CGD:CAL0001975
GO:GO:0009405 GO:GO:0003677 GO:GO:0007155 GO:GO:0003700
GO:GO:0006351 GO:GO:0000790 eggNOG:COG5068 SUPFAM:SSF55455
EMBL:AACQ01000024 GO:GO:1900461 GO:GO:0044182 RefSeq:XP_720319.1
RefSeq:XP_888720.1 ProteinModelPortal:Q5AFP3 SMR:Q5AFP3
STRING:Q5AFP3 GeneID:3638050 GeneID:3704001 KEGG:cal:CaO19.7025
KEGG:cal:CaO19_7025 KO:K12412 Uniprot:Q5AFP3
Length = 262
Score = 116 (45.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 9 RQKIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLG 68
++K ITFSKR++ I K A EL LTG+++ ++V S++G YTF P ++ + + G
Sbjct: 69 QEKSRRHITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKSEG 128
Query: 69 MN 70
N
Sbjct: 129 KN 130
>TAIR|locus:2029386 [details] [associations]
symbol:AGL66 "AGAMOUS-like 66" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0010584 "pollen exine
formation" evidence=RCA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:DQ446441
IPI:IPI00529104 RefSeq:NP_177921.2 UniGene:At.34354
ProteinModelPortal:Q1PFC2 SMR:Q1PFC2 STRING:Q1PFC2
EnsemblPlants:AT1G77980.1 GeneID:844133 KEGG:ath:AT1G77980
TAIR:At1g77980 InParanoid:Q1PFC2 OMA:TMEEYET PhylomeDB:Q1PFC2
ProtClustDB:CLSN2679793 ArrayExpress:Q1PFC2 Genevestigator:Q1PFC2
Uniprot:Q1PFC2
Length = 332
Score = 117 (46.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF-GHPSVEAVANRFLGMNQLPN 74
+TFSKRR+ + K A EL L +IA+++FS S + F G +E V +R++ ++
Sbjct: 19 VTFSKRRNGLIKKAYELSILCDIDIALLMFSPSDRLSLFSGKTRIEDVFSRYINLSDQER 78
Query: 75 DNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQPRMWETPVDEH 134
+N +LV + R + ++++ L R L + K + I Q+ + E + +
Sbjct: 79 EN--ALVFPDQSRRPDFQSKEY--LLRTLQQLKAENDIALQLTNPTAINSDVEELEHEVY 134
Query: 135 NLQEQLQM 142
LQ+QL M
Sbjct: 135 KLQQQLLM 142
>UNIPROTKB|O65874 [details] [associations]
symbol:MTF1 "MADS-box transcription factor 1" species:3888
"Pisum sativum" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0009888 "tissue development"
evidence=NAS] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 GO:GO:0009888
EMBL:AJ223318 PIR:T06543 ProteinModelPortal:O65874 Uniprot:O65874
Length = 247
Score = 115 (45.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 49/157 (31%), Positives = 71/157 (45%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF-GHPSVEAVANRFLGM 69
KI +TF+KRR+ + K A EL L +E+A++VFS GK Y F S+ R+
Sbjct: 14 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKC 73
Query: 70 NQ-LPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMRRGKETQP-RMW 127
N P N+ S ++ + EL+ Q L+ + E Q M G++ P
Sbjct: 74 NYGAPEGNVTS-----KEALVLELSSQQEYLKLKARYESLQRSQRNLM--GEDLGPLSSK 126
Query: 128 ETPVDEHNLQEQL-QMDSA---FMLGEL-DLLWKPQL 159
+ E L L Q+ S FML +L DL K L
Sbjct: 127 DLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHL 163
>TAIR|locus:2030621 [details] [associations]
symbol:AGL104 "AGAMOUS-like 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009555 "pollen development" evidence=IGI] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0010584 "pollen exine
formation" evidence=RCA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AC069252 ProtClustDB:CLSN2679793 EMBL:DQ056457
IPI:IPI00546953 PIR:A86354 RefSeq:NP_173632.1 UniGene:At.41619
ProteinModelPortal:Q9LM46 SMR:Q9LM46 STRING:Q9LM46
EnsemblPlants:AT1G22130.1 GeneID:838818 KEGG:ath:AT1G22130
TAIR:At1g22130 HOGENOM:HOG000242882 InParanoid:Q9LM46 OMA:ERESALY
PhylomeDB:Q9LM46 Genevestigator:Q9LM46 Uniprot:Q9LM46
Length = 335
Score = 116 (45.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF-GHPSVEAVANRFLGMNQLPN 74
+TFSKRR+ + K A EL L +IA+++FS S + F G +E V +RF+ LP
Sbjct: 19 VTFSKRRNGLIKKAYELSILCDIDIALIMFSPSDRLSLFSGKTRIEDVFSRFIN---LPK 75
Query: 75 DNIHSLVVGHRQVRINELNQQHNE-LRRQLDEEKEQEKILTQMRRGKETQPRMWETPVDE 133
S + Q R ++ Q+ E L R L + K + I Q+ + E +
Sbjct: 76 QERESALYFPDQNRRPDI--QNKECLLRILQQLKTENDIALQVTNPAAINSDVEELEHEV 133
Query: 134 HNLQEQLQM 142
LQ+QLQM
Sbjct: 134 CRLQQQLQM 142
>TAIR|locus:2028830 [details] [associations]
symbol:CAL "CAULIFLOWER" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009911 "positive regulation of flower
development" evidence=TAS] [GO:0010582 "floral meristem
determinacy" evidence=IEP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0010582 KO:K09264
GO:GO:0048830 GO:GO:0010093 ProtClustDB:CLSN2682513 EMBL:L36925
EMBL:AB493477 EMBL:AF061401 EMBL:AF061402 EMBL:AF061403
EMBL:AF061404 EMBL:AF061405 EMBL:AF061406 EMBL:AF061407
EMBL:AF061408 EMBL:AF061409 EMBL:AF061410 EMBL:AF061411
EMBL:AF061412 EMBL:AF061413 EMBL:AF061414 EMBL:AF061415
IPI:IPI00538144 PIR:E86389 RefSeq:NP_564243.1 UniGene:At.41269
ProteinModelPortal:Q39081 SMR:Q39081 IntAct:Q39081 STRING:Q39081
EnsemblPlants:AT1G26310.1 GeneID:839172 KEGG:ath:AT1G26310
GeneFarm:3483 TAIR:At1g26310 InParanoid:Q39081 OMA:ESEGNWC
PhylomeDB:Q39081 Genevestigator:Q39081 GermOnline:AT1G26310
Uniprot:Q39081
Length = 255
Score = 114 (45.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS-VEAVANRFLGM 69
KI +TFSKRR+ + K A E+ L +E++++VFS GK + + S +E V R+
Sbjct: 14 KINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERY 73
Query: 70 NQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDE-EKEQEKILTQMRRGKETQPRMWE 128
+ I H + N + +++ L+ +++ E+ Q L G+E +P +
Sbjct: 74 SYAERQLIAP--DSHVNAQTN-WSMEYSRLKAKIELLERNQRHYL-----GEELEPMSLK 125
Query: 129 TPVDEHNLQEQLQ 141
D NL++QL+
Sbjct: 126 ---DLQNLEQQLE 135
>ZFIN|ZDB-GENE-040426-1294 [details] [associations]
symbol:srfl "serum response factor like"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 ZFIN:ZDB-GENE-040426-1294
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 HSSP:P11831 OrthoDB:EOG48KRCZ
EMBL:BC057414 IPI:IPI00498001 RefSeq:NP_956925.1 UniGene:Dr.88333
ProteinModelPortal:Q6PFU5 SMR:Q6PFU5 PRIDE:Q6PFU5 GeneID:393604
KEGG:dre:393604 CTD:393604 NextBio:20814621 Uniprot:Q6PFU5
Length = 314
Score = 115 (45.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 153 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 212
>UNIPROTKB|D2T2G0 [details] [associations]
symbol:gsqua2 "GSQUA2 protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN298387 IntAct:D2T2G0
Uniprot:D2T2G0
Length = 238
Score = 113 (44.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFG-HPSVEAVANRF 66
KI +TFSKRR+ + K A E+ L +++A++VFS GK + + H S++A+ R+
Sbjct: 14 KISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYSTHSSMDAILERY 70
>TAIR|locus:2165386 [details] [associations]
symbol:AGL72 "AGAMOUS-like 72" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 EMBL:AB010074 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0009909 EMBL:AB025623 EMBL:AY141221
IPI:IPI00532403 RefSeq:NP_199999.1 UniGene:At.29656
ProteinModelPortal:Q9FLH5 SMR:Q9FLH5 IntAct:Q9FLH5
EnsemblPlants:AT5G51860.1 GeneID:835261 KEGG:ath:AT5G51860
TAIR:At5g51860 InParanoid:Q9FLH5 OMA:YEFASSD PhylomeDB:Q9FLH5
ProtClustDB:CLSN2687435 ArrayExpress:Q9FLH5 Genevestigator:Q9FLH5
Uniprot:Q9FLH5
Length = 211
Score = 112 (44.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 10 QKIEMI----ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANR 65
+KIE + +TFSKRRS ++K A EL L +++A ++FSQ G+ Y F + R
Sbjct: 9 KKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAMIFSQKGRLYEFASSDIRNTIKR 68
Query: 66 FLGMNQ----LPNDNIHSLVVGHRQVRIN-----ELNQQHNE--LRRQLDE--EKEQEKI 112
+ + I V G ++ + E+ + HN + + LD KE +I
Sbjct: 69 YAEYKREYFVAETHPIEQYVQGLKKEMVTMVKKIEVLEVHNRKMMGQSLDSCSVKELSEI 128
Query: 113 LTQMRRGKETQPRMWETPVDEHNLQE 138
TQ+ + R+ + + E LQ+
Sbjct: 129 ATQIEKSLH-MVRLRKAKLYEDELQK 153
>UNIPROTKB|Q9ATE9 [details] [associations]
symbol:FBP20 "MADS-box transcription factor FBP20"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AF335238
ProteinModelPortal:Q9ATE9 IntAct:Q9ATE9 Uniprot:Q9ATE9
Length = 216
Score = 112 (44.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLG 68
+TFSKRR+ + K A EL L +++ +V+FS GK Y F S++ + R+ G
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAQVGLVIFSPRGKQYEFSSSSMQEIIERYKG 71
>TAIR|locus:2102871 [details] [associations]
symbol:AGL79 "AGAMOUS-like 79" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0048830 GO:GO:0010093 OMA:PPWMLRT EMBL:AY141238
IPI:IPI00517180 RefSeq:NP_189645.2 UniGene:At.36813
ProteinModelPortal:Q7X9H6 SMR:Q7X9H6 IntAct:Q7X9H6
EnsemblPlants:AT3G30260.1 GeneID:822726 KEGG:ath:AT3G30260
TAIR:At3g30260 InParanoid:Q7X9H6 PhylomeDB:Q7X9H6
ProtClustDB:CLSN2918545 ArrayExpress:Q7X9H6 Genevestigator:Q7X9H6
Uniprot:Q7X9H6
Length = 249
Score = 113 (44.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 44/165 (26%), Positives = 81/165 (49%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGH-PSVEAVANRF--- 66
KI +TFSKRR+ + K A E+ L +E+A++VFS GK + + S+E + +R+
Sbjct: 14 KIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAGSSMERILDRYERS 73
Query: 67 -LGMNQLPNDNIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEKILTQMR--RGKETQ 123
+P N+ S G ++L + + L+R L + +E +R +G E Q
Sbjct: 74 AYAGQDIPTPNLDSQ--GECSTECSKLLRMIDVLQRSLRHLRGEEVDGLSIRDLQGVEMQ 131
Query: 124 PRMWETPVDE-HNLQEQLQMDSAFMLGELDLLWKPQLSKYIIEPA 167
+T + + + + QL ++S L + + K +L K + + A
Sbjct: 132 ---LDTALKKTRSRKNQLMVESIAQLQKKEKELK-ELKKQLTKKA 172
>TAIR|locus:2121924 [details] [associations]
symbol:AGL24 "AT4G24540" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010220 "positive regulation of
vernalization response" evidence=IEP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0000060 "protein import into nucleus,
translocation" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0010077 "maintenance of inflorescence meristem identity"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048438 "floral whorl development" evidence=IGI] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0010076 "maintenance of floral meristem identity" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 GO:GO:0000060 EMBL:AL035356 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 HSSP:Q02078 GO:GO:0048510
EMBL:AF005158 EMBL:AF005159 EMBL:AL161561 EMBL:BT025171
EMBL:AB493697 IPI:IPI00544128 PIR:T05580 PIR:T51827
RefSeq:NP_194185.1 UniGene:At.4507 ProteinModelPortal:O82794
SMR:O82794 IntAct:O82794 STRING:O82794 EnsemblPlants:AT4G24540.1
GeneID:828556 KEGG:ath:AT4G24540 GeneFarm:3509 TAIR:At4g24540
InParanoid:O82794 OMA:LHASNIN PhylomeDB:O82794
ProtClustDB:CLSN2915842 GO:GO:0010582 GO:GO:0048438 GO:GO:0010076
GO:GO:0010077 GO:GO:0010220 Uniprot:O82794
Length = 220
Score = 112 (44.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 33/114 (28%), Positives = 62/114 (54%)
Query: 1 MAAKKTKGRQKIEMI----ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGH 56
MA +K + + KI+ I +TFSKRR I+K A EL L +++A+++FS +GK + F
Sbjct: 1 MAREKIRIK-KIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSS 59
Query: 57 PSVEAVANRFLGMNQLPNDNIHSLV-VGHRQVRINELNQQHNELRRQLDEEKEQ 109
+ + R+ L NI+ L+ +R+ N + L ++++++ +Q
Sbjct: 60 SRMRDILGRY----SLHASNINKLMDPPSTHLRLENCNL--SRLSKEVEDKTKQ 107
>UNIPROTKB|Q6Q9I2 [details] [associations]
symbol:MADS15 "MADS-box transcription factor 15"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AP003759 EMBL:AP004342
ProtClustDB:CLSN2694303 EMBL:AF058698 EMBL:AB003325 EMBL:AF345911
EMBL:AY551920 RefSeq:NP_001058720.1 UniGene:Os.12750
ProteinModelPortal:Q6Q9I2 IntAct:Q6Q9I2
EnsemblPlants:LOC_Os07g01820.3 GeneID:4342214
KEGG:dosa:Os07t0108900-01 KEGG:osa:4342214 Gramene:Q6Q9I2
Uniprot:Q6Q9I2
Length = 267
Score = 102 (41.0 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS-VEAVANRF 66
KI +TFSKRR+ + K A E+ L +E+A +VFS GK Y + S ++ + R+
Sbjct: 14 KINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERY 70
Score = 45 (20.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 89 INELNQQHNELRRQLDEEKEQEKILTQMRRGKETQPRM--WE-TPVD-EHNLQEQLQMDS 144
I+EL ++ L+ +E K +K L + ++ Q ++ W+ T V + Q Q Q S
Sbjct: 151 ISELQKKERSLQ---EENKALQKELVERQKNVRGQQQVGQWDQTQVQAQAQAQPQAQTSS 207
Query: 145 AF--MLGELDLLWKPQ 158
+ ML + L PQ
Sbjct: 208 SSSSMLRDQQALLPPQ 223
>SGD|S000004645 [details] [associations]
symbol:ARG80 "Transcription factor involved in regulating
arginine-responsive genes" species:4932 "Saccharomyces cerevisiae"
[GO:0000987 "core promoter proximal region sequence-specific DNA
binding" evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006525 "arginine
metabolic process" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IC;ISA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:1900081 "regulation of arginine
catabolic process" evidence=IMP] [GO:1900079 "regulation of
arginine biosynthetic process" evidence=IMP] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 SGD:S000004645 GO:GO:0005634 GO:GO:0045944
EMBL:BK006946 GO:GO:0000987 GO:GO:0000982 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:Z48502 GO:GO:0006525 EMBL:X05327 EMBL:AY692845
PIR:S05822 RefSeq:NP_013756.1 ProteinModelPortal:P07249 SMR:P07249
DIP:DIP-2404N IntAct:P07249 MINT:MINT-543861 STRING:P07249
EnsemblFungi:YMR042W GeneID:855059 KEGG:sce:YMR042W CYGD:YMR042w
GeneTree:ENSGT00400000022158 KO:K09265 OrthoDB:EOG4P2TC4
NextBio:978312 Genevestigator:P07249 GermOnline:YMR042W
GO:GO:1900079 GO:GO:1900081 Uniprot:P07249
Length = 177
Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAV 62
+TFSKRR I K A EL LTG+ I +++ + SG YTF P +E V
Sbjct: 96 VTFSKRRHGIMKKAYELSVLTGANILLLILANSGLVYTFTTPKLEPV 142
>UNIPROTKB|Q90718 [details] [associations]
symbol:SRF "Serum response factor" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455 EMBL:U50596
IPI:IPI00594362 UniGene:Gga.2013 ProteinModelPortal:Q90718
SMR:Q90718 STRING:Q90718 HOGENOM:HOG000012380 HOVERGEN:HBG014968
InParanoid:Q90718 OrthoDB:EOG48KRCZ Uniprot:Q90718
Length = 375
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 5 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 64
>UNIPROTKB|Q40885 [details] [associations]
symbol:AG1 "Floral homeotic protein AGAMOUS" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:X72912 EMBL:AB076051 PIR:JQ2212
ProteinModelPortal:Q40885 IntAct:Q40885 Uniprot:Q40885
Length = 242
Score = 112 (44.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 29/96 (30%), Positives = 50/96 (52%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TF KRR+ + K A EL L +E+A++VFS G+ Y + + SV+A R+ +
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACS-DSS 93
Query: 76 NIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQEK 111
N S+ + Q Q+ ++LR Q+ + Q +
Sbjct: 94 NTGSIAEANAQY----YQQEASKLRAQIGNLQNQNR 125
>UNIPROTKB|Q9FST1 [details] [associations]
symbol:grcd1 "MADS box protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AJ400623 ProteinModelPortal:Q9FST1
IntAct:Q9FST1 Uniprot:Q9FST1
Length = 242
Score = 103 (41.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS 58
KI +TF+KRR+ + K A EL L +E+A++VFS GK Y F S
Sbjct: 14 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSTRGKLYEFSSTS 61
Score = 40 (19.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 90 NELNQQHNELRRQLDEEKEQEKI 112
++L + + LR +LDEE + E +
Sbjct: 162 HQLYESNKTLRLRLDEEGQAEAL 184
>TAIR|locus:505006709 [details] [associations]
symbol:AGL42 "AGAMOUS-like 42" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0009838 "abscission" evidence=IMP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0080187 "floral organ
senescence" evidence=IMP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 HOGENOM:HOG000155301 SUPFAM:SSF55455 HSSP:Q02078
GO:GO:0009909 EMBL:AB016880 GO:GO:0080187 EMBL:AY054220
EMBL:AY065206 EMBL:AY066035 EMBL:AY096509 EMBL:AY141213
IPI:IPI00526027 RefSeq:NP_001032123.1 RefSeq:NP_568952.1
RefSeq:NP_851247.1 UniGene:At.26394 ProteinModelPortal:Q9FIS1
SMR:Q9FIS1 IntAct:Q9FIS1 STRING:Q9FIS1 EnsemblPlants:AT5G62165.1
EnsemblPlants:AT5G62165.2 EnsemblPlants:AT5G62165.3 GeneID:836337
KEGG:ath:AT5G62165 TAIR:At5g62165 InParanoid:Q9FIS1 OMA:EASHMIT
PhylomeDB:Q9FIS1 ProtClustDB:CLSN2690064 ArrayExpress:Q9FIS1
Genevestigator:Q9FIS1 GO:GO:0009838 Uniprot:Q9FIS1
Length = 210
Score = 110 (43.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TFSKRR+ + K A EL L +++++++FSQ G+ Y F ++ R+ + D
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSSDMQKTIERY---RKYTKD 75
Query: 76 NIHSLVVGHRQVRINELNQQHNELRRQLDE-EKEQEKILTQ 115
H Q+ + +L Q+ + + +++ E + K+L Q
Sbjct: 76 --HETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQ 114
>TAIR|locus:2005522 [details] [associations]
symbol:AGL20 "AT2G45660" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0009908 "flower development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0009409 "response to cold" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:0010077
"maintenance of inflorescence meristem identity" evidence=IGI]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 GO:GO:0000060 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908
GO:GO:0010077 EMBL:AC003680 EMBL:AY007726 EMBL:AF385731
EMBL:AY093967 IPI:IPI00527426 PIR:T00879 RefSeq:NP_182090.1
UniGene:At.25546 ProteinModelPortal:O64645 SMR:O64645 IntAct:O64645
STRING:O64645 EnsemblPlants:AT2G45660.1 GeneID:819174
KEGG:ath:AT2G45660 GeneFarm:3500 TAIR:At2g45660 InParanoid:O64645
OMA:YEFASSN PhylomeDB:O64645 ProtClustDB:CLSN2683366
Genevestigator:O64645 GermOnline:AT2G45660 Uniprot:O64645
Length = 214
Score = 110 (43.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 26/99 (26%), Positives = 54/99 (54%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TFSKRR+ + K A EL L +E+++++FS GK Y F +++ +R+L + D
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTK---D 75
Query: 76 NIHSLVVGHRQVRINELNQQHNELRRQLDE-EKEQEKIL 113
+ + V ++ L + + +++++ E + K+L
Sbjct: 76 RVSTKPVSEENMQ--HLKYEAANMMKKIEQLEASKRKLL 112
>MGI|MGI:106658 [details] [associations]
symbol:Srf "serum response factor" species:10090 "Mus
musculus" [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IDA] [GO:0001076 "RNA polymerase II
transcription factor binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO;IDA]
[GO:0001228 "RNA polymerase II transcription regulatory region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001569 "patterning of blood vessels" evidence=IMP] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001707
"mesoderm formation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0001829 "trophectodermal cell differentiation"
evidence=ISO] [GO:0001947 "heart looping" evidence=IMP] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IMP] [GO:0002042
"cell migration involved in sprouting angiogenesis"
evidence=ISO;IMP] [GO:0002521 "leukocyte differentiation"
evidence=IMP] [GO:0003257 "positive regulation of transcription
from RNA polymerase II promoter involved in myocardial precursor
cell differentiation" evidence=ISO;IMP] [GO:0003677 "DNA binding"
evidence=IGI;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IC;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007015 "actin filament
organization" evidence=IMP] [GO:0007160 "cell-matrix adhesion"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IMP] [GO:0007507
"heart development" evidence=IMP] [GO:0007616 "long-term memory"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009725 "response to hormone stimulus"
evidence=ISO] [GO:0010669 "epithelial structure maintenance"
evidence=IMP] [GO:0010735 "positive regulation of transcription via
serum response element binding" evidence=ISO] [GO:0010736 "serum
response element binding" evidence=ISO;IDA] [GO:0016337 "cell-cell
adhesion" evidence=IMP] [GO:0021766 "hippocampus development"
evidence=IMP] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0030036 "actin cytoskeleton organization" evidence=IMP]
[GO:0030038 "contractile actin filament bundle assembly"
evidence=IMP] [GO:0030155 "regulation of cell adhesion"
evidence=IMP] [GO:0030168 "platelet activation" evidence=IMP]
[GO:0030220 "platelet formation" evidence=IMP] [GO:0030336
"negative regulation of cell migration" evidence=ISO] [GO:0031175
"neuron projection development" evidence=IMP] [GO:0031490
"chromatin DNA binding" evidence=IDA] [GO:0033561 "regulation of
water loss via skin" evidence=IMP] [GO:0034097 "response to
cytokine stimulus" evidence=ISO] [GO:0035855 "megakaryocyte
development" evidence=IMP] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IMP] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043149 "stress fiber assembly"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043589 "skin morphogenesis" evidence=IMP]
[GO:0045059 "positive thymic T cell selection" evidence=IMP]
[GO:0045214 "sarcomere organization" evidence=IMP] [GO:0045597
"positive regulation of cell differentiation" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP;IDA]
[GO:0045987 "positive regulation of smooth muscle contraction"
evidence=ISO] [GO:0046016 "positive regulation of transcription by
glucose" evidence=ISO] [GO:0046716 "muscle cell homeostasis"
evidence=IMP] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048821 "erythrocyte development" evidence=IMP] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IMP] [GO:0055003 "cardiac myofibril
assembly" evidence=IMP] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IMP] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0060292 "long term synaptic depression"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IMP]
[GO:0060947 "cardiac vascular smooth muscle cell differentiation"
evidence=IMP] [GO:0061029 "eyelid development in camera-type eye"
evidence=IMP] [GO:0070830 "tight junction assembly" evidence=IMP]
[GO:0090009 "primitive streak formation" evidence=IMP] [GO:0090136
"epithelial cell-cell adhesion" evidence=IMP] [GO:0090398 "cellular
senescence" evidence=ISO] [GO:1900222 "negative regulation of
beta-amyloid clearance" evidence=ISO] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 MGI:MGI:106658 GO:GO:0005783 GO:GO:0005737
GO:GO:0021766 GO:GO:0001764 GO:GO:0008285 GO:GO:0030168
GO:GO:0030155 GO:GO:0001701 GO:GO:0034097 GO:GO:0045597
GO:GO:0007616 GO:GO:0003705 GO:GO:0000978 GO:GO:0001077
GO:GO:0030336 GO:GO:0060292 GO:GO:0035855 GO:GO:0000790
GO:GO:0060218 GO:GO:0008306 GO:GO:0046716 GO:GO:0045987
GO:GO:0009725 GO:GO:0055003 GO:GO:0045214 GO:GO:0001707
GO:GO:0001569 GO:GO:0007160 GO:GO:0001829 GO:GO:0048589
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0051491 GO:GO:0001947
GO:GO:0031175 GO:GO:0048821 GO:GO:0061029 GO:GO:0000983
GO:GO:0070830 GO:GO:0031490 GeneTree:ENSGT00400000022158
GO:GO:0042789 GO:GO:0043149 GO:GO:0001076 GO:GO:0060347
GO:GO:0090398 GO:GO:0003257 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 HOGENOM:HOG000012380 HOVERGEN:HBG014968
OrthoDB:EOG48KRCZ CTD:6722 KO:K04378 OMA:MITSDTG EMBL:AB038376
EMBL:BC051950 IPI:IPI00124827 RefSeq:NP_065239.1 UniGene:Mm.45044
ProteinModelPortal:Q9JM73 SMR:Q9JM73 IntAct:Q9JM73 STRING:Q9JM73
PhosphoSite:Q9JM73 PRIDE:Q9JM73 Ensembl:ENSMUST00000015749
GeneID:20807 KEGG:mmu:20807 UCSC:uc008ctg.1 InParanoid:Q9JM73
NextBio:299523 Bgee:Q9JM73 CleanEx:MM_SRF Genevestigator:Q9JM73
GermOnline:ENSMUSG00000015605 Uniprot:Q9JM73
Length = 504
Score = 115 (45.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 134 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 193
>RGD|1559787 [details] [associations]
symbol:Srf "serum response factor (c-fos serum response
element-binding transcription factor)" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=ISO] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001228 "RNA polymerase II
transcription regulatory region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001569 "patterning of blood
vessels" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001707 "mesoderm formation" evidence=ISO]
[GO:0001764 "neuron migration" evidence=ISO] [GO:0001829
"trophectodermal cell differentiation" evidence=ISO] [GO:0001947
"heart looping" evidence=ISO] [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=ISO] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=ISO] [GO:0002521
"leukocyte differentiation" evidence=ISO] [GO:0003257 "positive
regulation of transcription from RNA polymerase II promoter
involved in myocardial precursor cell differentiation"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007015 "actin filament
organization" evidence=ISO] [GO:0007160 "cell-matrix adhesion"
evidence=ISO] [GO:0007369 "gastrulation" evidence=ISO] [GO:0007507
"heart development" evidence=ISO] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009725 "response to hormone stimulus"
evidence=ISO] [GO:0010669 "epithelial structure maintenance"
evidence=ISO] [GO:0010735 "positive regulation of transcription via
serum response element binding" evidence=ISO] [GO:0010736 "serum
response element binding" evidence=ISO] [GO:0016337 "cell-cell
adhesion" evidence=ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=ISO]
[GO:0030036 "actin cytoskeleton organization" evidence=ISO]
[GO:0030038 "contractile actin filament bundle assembly"
evidence=ISO] [GO:0030155 "regulation of cell adhesion"
evidence=ISO] [GO:0030168 "platelet activation" evidence=ISO]
[GO:0030220 "platelet formation" evidence=ISO] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=ISO] [GO:0033561 "regulation of
water loss via skin" evidence=ISO] [GO:0034097 "response to
cytokine stimulus" evidence=ISO] [GO:0035855 "megakaryocyte
development" evidence=ISO] [GO:0035912 "dorsal aorta morphogenesis"
evidence=ISO] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0043589 "skin morphogenesis" evidence=ISO]
[GO:0045059 "positive thymic T cell selection" evidence=ISO]
[GO:0045214 "sarcomere organization" evidence=ISO] [GO:0045597
"positive regulation of cell differentiation" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045987
"positive regulation of smooth muscle contraction" evidence=ISO]
[GO:0046016 "positive regulation of transcription by glucose"
evidence=IMP] [GO:0046716 "muscle cell homeostasis" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0048589 "developmental growth" evidence=ISO] [GO:0048821
"erythrocyte development" evidence=ISO] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:0055003 "cardiac myofibril
assembly" evidence=ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=ISO] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0060292 "long term synaptic depression"
evidence=ISO] [GO:0060347 "heart trabecula formation" evidence=ISO]
[GO:0060947 "cardiac vascular smooth muscle cell differentiation"
evidence=ISO] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISO] [GO:0070830 "tight junction assembly" evidence=ISO]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0090009 "primitive streak formation" evidence=ISO] [GO:0090136
"epithelial cell-cell adhesion" evidence=ISO] [GO:0090398 "cellular
senescence" evidence=ISO] [GO:1900222 "negative regulation of
beta-amyloid clearance" evidence=ISO] [GO:0000983 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity" evidence=ISO] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
RGD:1559787 GO:GO:0005783 GO:GO:0005634 GO:GO:0021766 GO:GO:0001764
GO:GO:0008285 GO:GO:0030168 GO:GO:0030155 GO:GO:0071333
GO:GO:0043565 GO:GO:0034097 GO:GO:0045597 GO:GO:0007616
GO:GO:0003705 GO:GO:0001077 GO:GO:0030336 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0060218 GO:GO:0008306
GO:GO:0046716 GO:GO:0045987 GO:GO:0009725 GO:GO:0055003
GO:GO:0045214 GO:GO:0001707 GO:GO:0001569 GO:GO:0007160
GO:GO:0001829 GO:GO:0048589 SUPFAM:SSF55455 GO:GO:0051491
GO:GO:0001947 GO:GO:0031175 GO:GO:0048821 GO:GO:0061029
GO:GO:0000983 GO:GO:0070830 GO:GO:0031490
GeneTree:ENSGT00400000022158 GO:GO:0043149 GO:GO:0001076
GO:GO:0060347 GO:GO:0090398 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 OrthoDB:EOG48KRCZ OMA:MITSDTG
IPI:IPI00565301 PhosphoSite:D3ZHH8 Ensembl:ENSRNOT00000061430
UCSC:RGD:1559787 GO:GO:0046016 Uniprot:D3ZHH8
Length = 504
Score = 115 (45.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 134 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 193
>UNIPROTKB|F1PH12 [details] [associations]
symbol:SRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 GeneTree:ENSGT00400000022158 CTD:6722
KO:K04378 OMA:MITSDTG EMBL:AAEX03008333 RefSeq:XP_852302.1
Ensembl:ENSCAFT00000002887 GeneID:612861 KEGG:cfa:612861
Uniprot:F1PH12
Length = 508
Score = 115 (45.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 138 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 197
>UNIPROTKB|P11831 [details] [associations]
symbol:SRF "Serum response factor" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001076
"RNA polymerase II transcription factor binding transcription
factor activity" evidence=IEA] [GO:0001569 "patterning of blood
vessels" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0010669 "epithelial
structure maintenance" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0030038 "contractile actin filament bundle assembly"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030168 "platelet activation" evidence=IEA]
[GO:0030220 "platelet formation" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0033561 "regulation of water loss via
skin" evidence=IEA] [GO:0035855 "megakaryocyte development"
evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0043589 "skin morphogenesis" evidence=IEA] [GO:0045059
"positive thymic T cell selection" evidence=IEA] [GO:0045214
"sarcomere organization" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048821 "erythrocyte development"
evidence=IEA] [GO:0051491 "positive regulation of filopodium
assembly" evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IEA] [GO:0060292 "long term synaptic depression"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0060947 "cardiac vascular smooth muscle cell differentiation"
evidence=IEA] [GO:0061029 "eyelid development in camera-type eye"
evidence=IEA] [GO:0070830 "tight junction assembly" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0090136
"epithelial cell-cell adhesion" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0001829 "trophectodermal cell differentiation"
evidence=IDA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010735 "positive regulation of transcription via serum
response element binding" evidence=IDA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IDA] [GO:0009636 "response to toxic substance"
evidence=TAS] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0034097 "response to cytokine stimulus" evidence=NAS;IMP]
[GO:0060055 "angiogenesis involved in wound healing" evidence=TAS]
[GO:0090398 "cellular senescence" evidence=IMP] [GO:0048666 "neuron
development" evidence=TAS] [GO:0045987 "positive regulation of
smooth muscle contraction" evidence=IDA] [GO:0051150 "regulation of
smooth muscle cell differentiation" evidence=TAS] [GO:0001947
"heart looping" evidence=ISS] [GO:0007507 "heart development"
evidence=ISS] [GO:0046716 "muscle cell homeostasis" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0010736 "serum response element binding"
evidence=IDA] [GO:0009725 "response to hormone stimulus"
evidence=IDA] [GO:0003257 "positive regulation of transcription
from RNA polymerase II promoter involved in myocardial precursor
cell differentiation" evidence=IGI] [GO:0042789 "mRNA transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=ISS] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISS] [GO:1900222 "negative regulation of beta-amyloid
clearance" evidence=IMP] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001666 "response to hypoxia" evidence=IEP]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:p38_mk2pathway
Pathway_Interaction_DB:hdac_classii_pathway GO:GO:0021766
GO:GO:0001764 GO:GO:0008285 GO:GO:0030168 GO:GO:0051091
EMBL:CH471081 GO:GO:0030155 GO:GO:0009636 GO:GO:0034097
GO:GO:0001666 GO:GO:0045597 GO:GO:0007616 GO:GO:0003705
GO:GO:0000978 GO:GO:0001077 GO:GO:0030336 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0048666 GO:GO:0060218
GO:GO:0008306 GO:GO:0046716 GO:GO:0045987 GO:GO:0009725
GO:GO:0055003 GO:GO:0045214 GO:GO:0001707 GO:GO:0001569
GO:GO:0007160 GO:GO:0001829 GO:GO:0048589 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0051491 GO:GO:0001947
Pathway_Interaction_DB:ar_pathway GO:GO:0031175 GO:GO:1900222
GO:GO:0048821 GO:GO:0061029 GO:GO:0070830 GO:GO:0031490
GO:GO:0042789 GO:GO:0043149 GO:GO:0001076 GO:GO:0060347
GO:GO:0090398 GO:GO:0060055 GO:GO:0051150 GO:GO:0003257
GO:GO:0090009 Pathway_Interaction_DB:mapktrkpathway GO:GO:0033561
GO:GO:0090136 Pathway_Interaction_DB:pdgfrapathway GO:GO:0045059
GO:GO:0043589 EMBL:AL355385 EMBL:AL133375 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 PDB:1HBX PDB:1K6O
PDBsum:1HBX PDBsum:1K6O GO:GO:0030220 GO:GO:0060947 GO:GO:0060261
GO:GO:0022028 GO:GO:0030038 GO:GO:0010736 GO:GO:0010735
HOGENOM:HOG000012380 HOVERGEN:HBG014968 OrthoDB:EOG48KRCZ
EMBL:J03161 EMBL:BC048211 EMBL:BC052572 IPI:IPI00007879 PIR:A31637
RefSeq:NP_003122.1 UniGene:Hs.520140 PDB:1SRS PDBsum:1SRS
ProteinModelPortal:P11831 SMR:P11831 DIP:DIP-49N IntAct:P11831
STRING:P11831 GlycoSuiteDB:P11831 PhosphoSite:P11831 DMDM:134876
PRIDE:P11831 Ensembl:ENST00000265354 GeneID:6722 KEGG:hsa:6722
UCSC:uc003oui.3 CTD:6722 GeneCards:GC06P043138 HGNC:HGNC:11291
HPA:CAB005416 HPA:HPA001819 MIM:600589 neXtProt:NX_P11831
PharmGKB:PA36116 InParanoid:P11831 KO:K04378 OMA:MITSDTG
PhylomeDB:P11831 EvolutionaryTrace:P11831 GenomeRNAi:6722
NextBio:26222 PMAP-CutDB:P11831 ArrayExpress:P11831 Bgee:P11831
CleanEx:HS_SRF Genevestigator:P11831 GermOnline:ENSG00000112658
Uniprot:P11831
Length = 508
Score = 115 (45.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 138 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 197
>UNIPROTKB|E1BJP4 [details] [associations]
symbol:SRF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:1900222 "negative regulation of beta-amyloid clearance"
evidence=IEA] [GO:0090398 "cellular senescence" evidence=IEA]
[GO:0090136 "epithelial cell-cell adhesion" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0070830
"tight junction assembly" evidence=IEA] [GO:0061029 "eyelid
development in camera-type eye" evidence=IEA] [GO:0060947 "cardiac
vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060292
"long term synaptic depression" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA] [GO:0055003 "cardiac myofibril
assembly" evidence=IEA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048821 "erythrocyte development" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0046716
"muscle cell homeostasis" evidence=IEA] [GO:0045987 "positive
regulation of smooth muscle contraction" evidence=IEA] [GO:0045597
"positive regulation of cell differentiation" evidence=IEA]
[GO:0045214 "sarcomere organization" evidence=IEA] [GO:0045059
"positive thymic T cell selection" evidence=IEA] [GO:0043589 "skin
morphogenesis" evidence=IEA] [GO:0043149 "stress fiber assembly"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0035855 "megakaryocyte development" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0033561 "regulation of water loss via skin" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030168 "platelet activation"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030038 "contractile actin filament bundle
assembly" evidence=IEA] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0010736
"serum response element binding" evidence=IEA] [GO:0010735
"positive regulation of transcription via serum response element
binding" evidence=IEA] [GO:0010669 "epithelial structure
maintenance" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0008306 "associative learning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003257 "positive regulation of
transcription from RNA polymerase II promoter involved in
myocardial precursor cell differentiation" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=IEA] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005783 GO:GO:0021766
GO:GO:0001764 GO:GO:0030168 GO:GO:0030155 GO:GO:0034097
GO:GO:0045597 GO:GO:0003705 GO:GO:0001077 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0060218 GO:GO:0008306
GO:GO:0046716 GO:GO:0045987 GO:GO:0009725 GO:GO:0055003
GO:GO:0045214 GO:GO:0001707 GO:GO:0001569 GO:GO:0007160
GO:GO:0001829 GO:GO:0048589 SUPFAM:SSF55455 GO:GO:0051491
GO:GO:0001947 GO:GO:0031175 GO:GO:0048821 GO:GO:0061029
GO:GO:0000983 GO:GO:0070830 GO:GO:0031490
GeneTree:ENSGT00400000022158 GO:GO:0043149 GO:GO:0001076
GO:GO:0060347 GO:GO:0090398 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 CTD:6722 KO:K04378 OMA:MITSDTG
EMBL:DAAA02055086 IPI:IPI00700101 RefSeq:NP_001192945.1
UniGene:Bt.51656 Ensembl:ENSBTAT00000016981 GeneID:533039
KEGG:bta:533039 NextBio:20875885 Uniprot:E1BJP4
Length = 509
Score = 115 (45.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 139 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 198
>UNIPROTKB|F1RRM9 [details] [associations]
symbol:SRF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900222 "negative regulation of beta-amyloid clearance"
evidence=IEA] [GO:0090398 "cellular senescence" evidence=IEA]
[GO:0090136 "epithelial cell-cell adhesion" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0070830
"tight junction assembly" evidence=IEA] [GO:0061029 "eyelid
development in camera-type eye" evidence=IEA] [GO:0060947 "cardiac
vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060292
"long term synaptic depression" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA] [GO:0055003 "cardiac myofibril
assembly" evidence=IEA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048821 "erythrocyte development" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0046716
"muscle cell homeostasis" evidence=IEA] [GO:0045987 "positive
regulation of smooth muscle contraction" evidence=IEA] [GO:0045597
"positive regulation of cell differentiation" evidence=IEA]
[GO:0045214 "sarcomere organization" evidence=IEA] [GO:0045059
"positive thymic T cell selection" evidence=IEA] [GO:0043589 "skin
morphogenesis" evidence=IEA] [GO:0043149 "stress fiber assembly"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0035855 "megakaryocyte development" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0033561 "regulation of water loss via skin" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030168 "platelet activation"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030038 "contractile actin filament bundle
assembly" evidence=IEA] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0010736
"serum response element binding" evidence=IEA] [GO:0010735
"positive regulation of transcription via serum response element
binding" evidence=IEA] [GO:0010669 "epithelial structure
maintenance" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0008306 "associative learning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003257 "positive regulation of
transcription from RNA polymerase II promoter involved in
myocardial precursor cell differentiation" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=IEA] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005783 GO:GO:0021766
GO:GO:0001764 GO:GO:0030168 GO:GO:0030155 GO:GO:0034097
GO:GO:0045597 GO:GO:0003705 GO:GO:0001077 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0060218 GO:GO:0008306
GO:GO:0046716 GO:GO:0045987 GO:GO:0009725 GO:GO:0055003
GO:GO:0045214 GO:GO:0001707 GO:GO:0001569 GO:GO:0007160
GO:GO:0001829 GO:GO:0048589 SUPFAM:SSF55455 GO:GO:0051491
GO:GO:0001947 GO:GO:0031175 GO:GO:0048821 GO:GO:0061029
GO:GO:0000983 GO:GO:0070830 GO:GO:0031490
GeneTree:ENSGT00400000022158 GO:GO:0043149 GO:GO:0001076
GO:GO:0060347 GO:GO:0090398 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 CTD:6722 KO:K04378 OMA:MITSDTG
EMBL:CR974479 RefSeq:XP_001929300.1 Ensembl:ENSSSCT00000001852
GeneID:100155958 KEGG:ssc:100155958 Uniprot:F1RRM9
Length = 512
Score = 115 (45.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 142 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 201
>ZFIN|ZDB-GENE-990714-29 [details] [associations]
symbol:srf "serum response factor" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
ZFIN:ZDB-GENE-990714-29 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
GeneTree:ENSGT00400000022158 HOGENOM:HOG000012380
HOVERGEN:HBG014968 OrthoDB:EOG48KRCZ CTD:6722 KO:K04378
EMBL:CR925810 IPI:IPI00833860 RefSeq:NP_001103996.1 UniGene:Dr.8167
SMR:A8HAM3 Ensembl:ENSDART00000076040 GeneID:30431 KEGG:dre:30431
OMA:CLTHERE NextBio:20806833 Uniprot:A8HAM3
Length = 539
Score = 115 (45.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 KKTKGRQKIEM---------IITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KKT+GR KI+M TFSKR++ I K A EL TLTG+++ ++V S++G YTF
Sbjct: 117 KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF 176
>TAIR|locus:2042182 [details] [associations]
symbol:AGL44 "AGAMOUS-like 44" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IMP]
[GO:0048527 "lateral root development" evidence=RCA;IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0071249 "cellular response to nitrate" evidence=IEP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0010638 "positive regulation
of organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0052543 "callose deposition in cell wall" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0010167
"response to nitrate" evidence=IMP] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0007584 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
GO:GO:0071249 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 KO:K09264 EMBL:Z97057 EMBL:AC007210 EMBL:BT005861
EMBL:AK228244 IPI:IPI00529627 PIR:A84515 PIR:T52100
RefSeq:NP_179033.1 UniGene:At.126 ProteinModelPortal:Q9SI38
SMR:Q9SI38 IntAct:Q9SI38 STRING:Q9SI38 EnsemblPlants:AT2G14210.1
GeneID:815907 KEGG:ath:AT2G14210 GeneFarm:3545 TAIR:At2g14210
InParanoid:Q9SI38 OMA:YLQECHR PhylomeDB:Q9SI38
Genevestigator:Q9SI38 Uniprot:Q9SI38
Length = 234
Score = 110 (43.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFG-HPSVEAVANRFLGMNQLPN 74
+TFSKRRS + K A EL L +E+ +++FS +GK Y + + S++ + R+ + + +
Sbjct: 19 VTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASNSSMKTIIERYNRVKEEQH 78
Query: 75 DNI-HSLVVGHRQVRINELNQQ 95
+ H+ + Q + L QQ
Sbjct: 79 QLLNHASEIKFWQREVASLQQQ 100
>UNIPROTKB|Q9ZS25 [details] [associations]
symbol:gsqua1 "MADS-box protein, GSQUA1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009727 ProteinModelPortal:Q9ZS25 IntAct:Q9ZS25
Uniprot:Q9ZS25
Length = 210
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS-VEAVANRFLGM 69
KI +TFSKRR + K A E+ L +E+A++VFS GK + + S +E + +R+
Sbjct: 14 KINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMENILDRY--- 70
Query: 70 NQLPN-DNIHSLVVGHRQVR----INELNQQHNELRRQL 103
Q N D H V +R N+L + L+R L
Sbjct: 71 EQYSNIDRQHVAVDTDSPIRWTQECNKLKSRAELLQRNL 109
>UNIPROTKB|D2T2F8 [details] [associations]
symbol:grcd4 "GRCD4 protein" species:18101 "Gerbera hybrid
cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN297860 IntAct:D2T2F8
Uniprot:D2T2F8
Length = 249
Score = 101 (40.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF 54
KI +TF+KRR+ + K A EL L +E+A+++FS GK Y F
Sbjct: 14 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 92 LNQQHNELRRQLDEEKEQEKILTQMRRGKETQP 124
L + + LR++L+E ++ + G +T P
Sbjct: 160 LAETNKALRKKLEESAQEYPVRQMWEGGAQTIP 192
>TAIR|locus:2173522 [details] [associations]
symbol:AGL8 "AGAMOUS-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009911 "positive regulation of flower development"
evidence=TAS] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IGI] [GO:0031540 "regulation of anthocyanin
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0010154 "fruit development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010077
KO:K09264 EMBL:U33473 EMBL:AB008269 EMBL:AF386929 EMBL:AY072463
IPI:IPI00522952 PIR:S71208 RefSeq:NP_568929.1 UniGene:At.5426
ProteinModelPortal:Q38876 SMR:Q38876 IntAct:Q38876 STRING:Q38876
EnsemblPlants:AT5G60910.1 GeneID:836212 KEGG:ath:AT5G60910
GeneFarm:3484 TAIR:At5g60910 InParanoid:Q38876 OMA:DSCMERI
PhylomeDB:Q38876 ProtClustDB:CLSN2690058 Genevestigator:Q38876
GermOnline:AT5G60910 GO:GO:0048830 GO:GO:0010154 GO:GO:0010093
Uniprot:Q38876
Length = 242
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPS-VEAVANRF 66
KI +TFSKRRS + K A E+ L +E+A++VFS GK + + S +E + R+
Sbjct: 14 KINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERY 70
>UNIPROTKB|Q43616 [details] [associations]
symbol:fbp7 "Floral binding protein number 7" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 UniProt:Q43616 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:X81651
ProteinModelPortal:Q43616 IntAct:Q43616
Length = 225
Score = 107 (42.7 bits), Expect = 0.00018, P = 0.00018
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRF 66
+TF KRR+ + K A EL L +EIA++VFS G+ Y + + ++ A+ +R+
Sbjct: 19 VTFCKRRNGLLKKAYELSVLCEAEIALIVFSTRGRVYEYSNNNIRAIIDRY 69
>UNIPROTKB|Q03489 [details] [associations]
symbol:FBP2 "Agamous-like MADS-box protein AGL9 homolog"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:M91666 PIR:JQ1690
ProteinModelPortal:Q03489 IntAct:Q03489 Uniprot:Q03489
Length = 241
Score = 107 (42.7 bits), Expect = 0.00021, P = 0.00021
Identities = 31/96 (32%), Positives = 50/96 (52%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF-GHPSVEAVANRFLGM 69
KI +TF+KRR+ + K A EL L +E+A+++FS GK Y F S+ R+
Sbjct: 14 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKC 73
Query: 70 NQ-LPNDNI---HSLVVGHRQVRINELNQQHNELRR 101
N P NI +L + +Q + +L ++ L+R
Sbjct: 74 NYGAPETNISTREALEISSQQEYL-KLKARYEALQR 108
>TAIR|locus:2143261 [details] [associations]
symbol:SEP1 "SEPALLATA1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0009886 "post-embryonic morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0010093 "specification of floral organ identity" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048507 "meristem development"
evidence=RCA] [GO:0009908 "flower development" evidence=IDA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 KO:K09264 GO:GO:0048481
IPI:IPI00891534 RefSeq:NP_001119230.1 UniGene:At.10163
UniGene:At.49025 ProteinModelPortal:F4KB90 SMR:F4KB90 PRIDE:F4KB90
EnsemblPlants:AT5G15800.2 GeneID:831436 KEGG:ath:AT5G15800
OMA:CSEQITA Uniprot:F4KB90
Length = 262
Score = 107 (42.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/155 (26%), Positives = 75/155 (48%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMN 70
KI +TF+KRR+ + K A EL L +E+A+++FS GK Y F S N ++
Sbjct: 14 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-----NMLKTLD 68
Query: 71 QLPNDNIHSLVVGHRQVRINELNQQHNE---LRRQLDEEKEQEKILTQMRRG--KETQPR 125
+ + S+ V ++ + EL + E L+ + + + Q++ L G +
Sbjct: 69 RYQKCSYGSIEVNNKPAK--ELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELE 126
Query: 126 MWETPVDEHNLQEQLQMDSAFMLGEL-DLLWKPQL 159
E +D +L++ + + +ML +L DL K Q+
Sbjct: 127 QLERQLDG-SLKQVRSIKTQYMLDQLSDLQNKEQM 160
>UNIPROTKB|H0YM62 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000560493 Bgee:H0YM62 Uniprot:H0YM62
Length = 85
Score = 89 (36.4 bits), Expect = 0.00039, P = 0.00039
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TF+KR+ + K A EL L EIA+++F+ S K + + ++ V ++ N+ P++
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE-PHE 77
Query: 76 N 76
+
Sbjct: 78 S 78
>UNIPROTKB|I3L7L3 [details] [associations]
symbol:LOC100738718 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 GeneTree:ENSGT00390000011828
EMBL:CU618336 Ensembl:ENSSSCT00000024093 OMA:SMGRKKI Uniprot:I3L7L3
Length = 94
Score = 89 (36.4 bits), Expect = 0.00039, P = 0.00039
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TF+KR+ + K A EL L EIA+++F+ S K + + ++ V ++ N+ P++
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE-PHE 77
Query: 76 N 76
+
Sbjct: 78 S 78
>UNIPROTKB|Q9ATF1 [details] [associations]
symbol:FBP9 "MADS-box transcription factor FBP9"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335236 ProteinModelPortal:Q9ATF1 IntAct:Q9ATF1
Uniprot:Q9ATF1
Length = 245
Score = 105 (42.0 bits), Expect = 0.00042, P = 0.00042
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 11 KIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF-GHPSVEAVANRF--- 66
KI +TF+KRR+ + K A EL L +E+A+++FS GK Y F S+ ++
Sbjct: 14 KINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSTSSMMKTLEKYQQC 73
Query: 67 ----LGMNQLPND---NIHSLVVGHRQVRINELNQ-QHNELRRQLDE--EKEQEKILTQM 116
L Q ND N H + + R+ L + Q N L L KE E++ Q+
Sbjct: 74 SYASLDPMQSANDTQNNYHEYL--RLKARVELLQRSQRNLLGEDLGSLNSKELEQLEHQL 131
Query: 117 RRG-KETQPRMWETPVDE-HNLQEQLQM 142
K+ + + + +D+ +LQ++ QM
Sbjct: 132 DSSLKQIRSKKTQHMLDQLADLQQKEQM 159
>TAIR|locus:2140578 [details] [associations]
symbol:STK "AT4G09960" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048440 "carpel development" evidence=IMP]
[GO:0048481 "ovule development" evidence=IGI;RCA;IMP] [GO:0048316
"seed development" evidence=IGI] [GO:0080155 "regulation of double
fertilization forming a zygote and endosperm" evidence=IGI]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0048441 "petal
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048316 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048481 GO:GO:0080155 EMBL:AL161516
OMA:NENIYLR GO:GO:0048283 IPI:IPI00846258 RefSeq:NP_001078364.1
UniGene:At.2918 ProteinModelPortal:A8MQL9 SMR:A8MQL9 STRING:A8MQL9
EnsemblPlants:AT4G09960.3 GeneID:826586 KEGG:ath:AT4G09960
ProtClustDB:CLSN2685652 Genevestigator:A8MQL9 Uniprot:A8MQL9
Length = 256
Score = 105 (42.0 bits), Expect = 0.00047, P = 0.00047
Identities = 24/88 (27%), Positives = 50/88 (56%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TF KRR+ + K A EL L +E+A++VFS G+ Y + + ++ + R+ + +D
Sbjct: 45 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERY---KKACSD 101
Query: 76 NIHSLVVGHRQVRINELNQQHNELRRQL 103
+ ++ V +++ Q+ +LR+Q+
Sbjct: 102 STNTSTV--QEINAAYYQQESAKLRQQI 127
>UNIPROTKB|H0YKY6 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000559903 Bgee:H0YKY6 Uniprot:H0YKY6
Length = 77
Score = 88 (36.0 bits), Expect = 0.00050, P = 0.00050
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TF+KR+ + K A EL L EIA+++F+ S K + + ++ V ++ N+ P++
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNE-PHE 77
>UNIPROTKB|Q03378 [details] [associations]
symbol:GLO "Floral homeotic protein GLOBOSA" species:4151
"Antirrhinum majus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:X68831 PIR:S28062
ProteinModelPortal:Q03378 IntAct:Q03378 Uniprot:Q03378
Length = 215
Score = 103 (41.3 bits), Expect = 0.00057, P = 0.00057
Identities = 24/95 (25%), Positives = 50/95 (52%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+T+SKRR+ I K A E+ L + +++++F+ SGK + F PS V + ++L
Sbjct: 19 VTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLV-DMLDHYHKLSGK 77
Query: 76 NIHSLVVGHRQVRINELNQQHNELRRQLDEEKEQE 110
+ H IN + ++++ ++ +L K ++
Sbjct: 78 RLWDPKHEHLDNEINRVKKENDSMQIELRHLKGED 112
>TAIR|locus:2159848 [details] [associations]
symbol:AT5G38620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:AB005231 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
eggNOG:KOG0014 HOGENOM:HOG000033848 ProtClustDB:CLSN2687118
EMBL:AY141237 IPI:IPI00535170 RefSeq:NP_198678.1 UniGene:At.64261
ProteinModelPortal:Q9FFV9 SMR:Q9FFV9 IntAct:Q9FFV9 STRING:Q9FFV9
EnsemblPlants:AT5G38620.1 GeneID:833852 KEGG:ath:AT5G38620
TAIR:At5g38620 PhylomeDB:Q9FFV9 Genevestigator:Q9FFV9
Uniprot:Q9FFV9
Length = 349
Score = 106 (42.4 bits), Expect = 0.00064, P = 0.00064
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 10 QKIEMI-ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKP----YTFGHPSVEAVAN 64
QK + + +T +KRR +Y AS+L L+ ++IAI+ S + Y+FGH SV+AV +
Sbjct: 15 QKRDSLRVTCTKRRKGLYSKASQLCLLSDAQIAILATPPSSESDVSFYSFGHSSVDAVVS 74
Query: 65 RFL-GMNQL--PNDN 76
FL G + P DN
Sbjct: 75 AFLSGKRPVSAPKDN 89
>UNIPROTKB|D6RG14 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000987 "core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001782 "B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0007521 "muscle cell
fate determination" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0010694 "positive regulation of alkaline
phosphatase activity" evidence=IEA] [GO:0014033 "neural crest cell
differentiation" evidence=IEA] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 GO:GO:0003211 GO:GO:0035984 GO:GO:2001013
GO:GO:0072102 GO:GO:0072160 GO:GO:0014033 GO:GO:0003138
GO:GO:0060297 GO:GO:0003185 GO:GO:0055012 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00967981
ProteinModelPortal:D6RG14 SMR:D6RG14 Ensembl:ENST00000503075
ArrayExpress:D6RG14 Bgee:D6RG14 Uniprot:D6RG14
Length = 87
Score = 86 (35.3 bits), Expect = 0.00087, P = 0.00087
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TF+KR+ + K A EL L EIA+++F+ + K + + ++ V ++ N+ P++
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNE-PHE 77
Query: 76 N 76
+
Sbjct: 78 S 78
>UNIPROTKB|D6RJA7 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007521
"muscle cell fate determination" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0010629 "negative regulation
of gene expression" evidence=IEA] [GO:0010694 "positive regulation
of alkaline phosphatase activity" evidence=IEA] [GO:0014033 "neural
crest cell differentiation" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0000165 "MAPK cascade"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001782
"B cell homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 HOGENOM:HOG000230620 GO:GO:0003211 GO:GO:0035984
GO:GO:2001013 GO:GO:0072102 GO:GO:0072160 GO:GO:0014033
GO:GO:0003138 GO:GO:0060297 GO:GO:0003185 GO:GO:0055012
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964921 ProteinModelPortal:D6RJA7 SMR:D6RJA7
Ensembl:ENST00000502831 ArrayExpress:D6RJA7 Bgee:D6RJA7
Uniprot:D6RJA7
Length = 98
Score = 86 (35.3 bits), Expect = 0.00087, P = 0.00087
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 16 ITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTFGHPSVEAVANRFLGMNQLPND 75
+TF+KR+ + K A EL L EIA+++F+ + K + + ++ V ++ N+ P++
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNE-PHE 77
Query: 76 N 76
+
Sbjct: 78 S 78
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 11 22 0.40 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 90
No. of states in DFA: 580 (62 KB)
Total size of DFA: 152 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.88u 0.15s 23.03t Elapsed: 00:00:01
Total cpu time: 22.88u 0.15s 23.03t Elapsed: 00:00:01
Start: Sat May 11 15:11:11 2013 End: Sat May 11 15:11:12 2013