Query 048698
Match_columns 285
No_of_seqs 170 out of 1144
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 21:18:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048698.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048698hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 1.6E-61 5.4E-66 452.1 30.8 278 1-284 6-320 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 3.9E-60 1.3E-64 440.5 27.9 283 1-283 3-306 (421)
3 2xr7_A Malonyltransferase; xen 100.0 1.1E-56 3.7E-61 421.0 19.8 281 2-284 1-335 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 1.4E-55 4.8E-60 413.6 26.2 280 1-285 5-334 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 2E-46 6.9E-51 351.0 20.2 257 23-284 4-322 (451)
6 1q9j_A PAPA5, polyketide synth 98.8 1.8E-07 6E-12 85.3 18.2 226 22-272 6-289 (422)
7 1l5a_A Amide synthase, VIBH; n 98.4 1.8E-05 6.3E-10 72.3 17.4 199 55-277 33-281 (436)
8 2jgp_A Tyrocidine synthetase 3 98.4 4.5E-05 1.5E-09 71.6 20.3 229 21-278 94-378 (520)
9 4hvm_A Tlmii; PSI-biology, mid 98.2 2E-05 7E-10 73.4 13.5 234 22-280 12-305 (493)
10 2xhg_A Tyrocidine synthetase A 98.0 0.0013 4.5E-08 60.4 22.0 231 21-276 15-311 (466)
11 2vsq_A Surfactin synthetase su 97.7 0.0015 5.3E-08 68.1 19.1 202 55-276 47-303 (1304)
12 3fot_A 15-O-acetyltransferase; 97.6 0.00046 1.6E-08 65.0 11.5 131 146-276 177-362 (519)
13 3cla_A Type III chloramphenico 81.7 1.3 4.5E-05 36.3 4.0 45 131-175 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 80.9 1.5 5.1E-05 36.1 4.1 44 131-174 171-216 (217)
15 1q23_A Chloramphenicol acetylt 80.3 1.5 5.3E-05 36.0 4.0 44 132-175 168-213 (219)
16 3rqc_A Probable lipoamide acyl 78.2 2 6.8E-05 35.5 4.1 31 147-177 187-217 (224)
17 1dpb_A Dihydrolipoyl-transacet 78.2 1.9 6.7E-05 36.0 4.0 30 147-176 208-237 (243)
18 1scz_A E2, dihydrolipoamide su 78.1 2 6.8E-05 35.7 4.0 30 147-176 196-225 (233)
19 3b8k_A PDCE2;, dihydrolipoylly 77.8 1.8 6.1E-05 36.1 3.7 30 147-176 204-233 (239)
20 2ii3_A Lipoamide acyltransfera 77.0 2.2 7.4E-05 36.2 4.0 30 147-176 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 73.0 3.2 0.00011 35.0 4.0 31 147-177 210-240 (256)
22 3l60_A Branched-chain alpha-ke 71.8 3.5 0.00012 34.6 4.0 30 147-176 205-234 (250)
23 3dva_I Dihydrolipoyllysine-res 50.3 3.3 0.00011 37.6 0.0 30 147-176 391-420 (428)
24 2xl1_A Arginine attenuator pep 48.6 10 0.00034 19.1 1.6 18 220-237 7-24 (26)
25 2xt6_A 2-oxoglutarate decarbox 31.7 39 0.0013 34.6 4.3 30 147-176 192-221 (1113)
26 1x93_A Hypothetical protein HP 27.1 97 0.0033 18.7 3.8 37 196-239 3-39 (55)
27 2kl8_A OR15; structural genomi 24.3 83 0.0028 20.2 3.4 25 55-79 10-34 (85)
28 4hhu_A OR280; engineered prote 23.0 95 0.0033 22.5 3.9 24 56-79 93-116 (170)
29 1clv_I Protein (alpha-amylase 22.1 24 0.00083 18.5 0.4 8 264-271 24-31 (32)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=1.6e-61 Score=452.13 Aligned_cols=278 Identities=22% Similarity=0.326 Sum_probs=237.4
Q ss_pred CeEEEEeeeeeeCCCCCCCCCccccCCcCcCCCCCCCccEEEEecCCCCCCCccchHHHHHHHHHHhhccccCCCceec-
Q 048698 1 MEISIVSKEVVRPSSLDFHLLKPFKISLLDQLTPTTFSPLILFYPMRNTHLKGAQISTQLKESLSKTLDHLYPFAGRVR- 79 (285)
Q Consensus 1 ~~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~- 79 (285)
|+|+|.++++|+|+.|+|. +.++||+||+.+++.|++.+|||+.++. +....+++||+||+++|++||||||||+
T Consensus 6 ~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~--~~~~~~~~Lk~sLs~~L~~f~plAGRl~~ 81 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS--SNFFDAKVLKDALSRALVPFYPMAGRLKR 81 (439)
T ss_dssp CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC--TTTTCHHHHHHHHHHHTTTTGGGGCEEEE
T ss_pred eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC--ccccHHHHHHHHHHHHHhhccccceeeee
Confidence 6899999999999999875 5799999999988899999999997543 2335689999999999999999999997
Q ss_pred ---CceEEEeCCCCeeEEEEEEeeccccccCCCCcccccccCCCCCCCCCCCCCCCCeEEEEEeEEecCcEEEEeeeccc
Q 048698 80 ---DNLIINDYDEGVPYIETRVNTHLFEFLQNPPMELLDQCLPYPPLSYQPNSDQVPQAAVQLNIFDCGGIALGLCLSHK 156 (285)
Q Consensus 80 ---~~~~i~~~~~gv~f~~a~~~~~~~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~ 156 (285)
++++|+||++||.|+||++|.+++|+.+......+++|+|..++. .+..+.|++.+|||+|+|||++||+++||.
T Consensus 82 ~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~--~~~~~~pll~vQvT~f~cGG~~lg~~~~H~ 159 (439)
T 4g22_A 82 DEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYS--QGISSYALLVLQVTYFKCGGVSLGVGMRHH 159 (439)
T ss_dssp CTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTT--SCTTSSCSEEEEEEECTTSCEEEEEEECTT
T ss_pred CCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc--cccccCceeEEEEEEecCCCEEEEEEeeec
Confidence 379999999999999999999999997632334567888865432 224567999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHhcCCCCCccc-cC--------Cc-------c---------------ccC-CCccEEEEEeChH
Q 048698 157 IIDGATASGFLRSWAANSRGACHEAVT-YK--------NI-------W---------------FRE-ANSKTRRFVFDAK 204 (285)
Q Consensus 157 v~Dg~~~~~fl~~wa~~~rg~~~~~~P-~p--------~~-------~---------------~~~-~~~~~~~f~~~~~ 204 (285)
++||.|+.+|+++||++|||......| |+ ++ + ... .+...++|+|+++
T Consensus 160 v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~ 239 (439)
T 4g22_A 160 AADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTRE 239 (439)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHH
Confidence 999999999999999999997542223 11 00 0 001 4578999999999
Q ss_pred HHHHHHHhcccCC-CCCCChhhhhHHHHHHHHHHhhcCCCCCcEEEEEEecCcCcCCCCCCcCccccceeeccccccccc
Q 048698 205 AIASLRSECKGER-VSNPTRIEALSAFILKSAMLASRSTANSRFVLHQAVNLRRLTEPRLSTYTVGNLFLFASAAYNMEH 283 (285)
Q Consensus 205 ~l~~Lk~~~~~~~-~~~~St~dal~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~r~~p~lp~~Y~GN~~~~~~~~~~~~~ 283 (285)
+|++||+++..+. ..++||||+|+||+|+|+++||+.++++.+++.++||+|+|++||+|++|+||++.++.+.++++|
T Consensus 240 ~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~e 319 (439)
T 4g22_A 240 QISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGD 319 (439)
T ss_dssp HHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHH
T ss_pred HHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHH
Confidence 9999999998653 467999999999999999999988888999999999999999999999999999999999998877
Q ss_pred c
Q 048698 284 A 284 (285)
Q Consensus 284 ~ 284 (285)
+
T Consensus 320 l 320 (439)
T 4g22_A 320 L 320 (439)
T ss_dssp H
T ss_pred H
Confidence 5
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.9e-60 Score=440.52 Aligned_cols=283 Identities=38% Similarity=0.573 Sum_probs=236.6
Q ss_pred CeEEEEeeeeeeCCCCCCCCCccccCCcCcCCCCCCCccEEEEecCCCCCC-CccchHHHHHHHHHHhhccccCCCceec
Q 048698 1 MEISIVSKEVVRPSSLDFHLLKPFKISLLDQLTPTTFSPLILFYPMRNTHL-KGAQISTQLKESLSKTLDHLYPFAGRVR 79 (285)
Q Consensus 1 ~~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~-~~~~~~~~Lk~sL~~~L~~~p~laGrl~ 79 (285)
|+|+++++++|+|+.||+.+.++++||+||+..++.|++.+|||+.++... +.+..+++||+||+++|++||||||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 689999999999999988766789999999987789999999999754310 2446899999999999999999999999
Q ss_pred CceEEEeCCCCeeEEEEEEeeccccccCC-CCcccccccCCCCCCCCC-CCCCCCCeEEEEEeEEecCcEEEEeeecccc
Q 048698 80 DNLIINDYDEGVPYIETRVNTHLFEFLQN-PPMELLDQCLPYPPLSYQ-PNSDQVPQAAVQLNIFDCGGIALGLCLSHKI 157 (285)
Q Consensus 80 ~~~~i~~~~~gv~f~~a~~~~~~~~l~~~-p~~~~~~~l~p~~~~~~~-~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v 157 (285)
++++|+|+++||.|++|++|.+++|+.+. |+...++.|+|....... ....+.|++.+|||+|+|||++||+++||.+
T Consensus 83 ~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v 162 (421)
T 2bgh_A 83 VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKI 162 (421)
T ss_dssp TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEe
Confidence 88999999999999999999999999875 665567788876521100 0134689999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHhcCCCCCccc-cCC--------------ccccCCCccEEEEEeChHHHHHHHHhcccCCC-CCC
Q 048698 158 IDGATASGFLRSWAANSRGACHEAVT-YKN--------------IWFREANSKTRRFVFDAKAIASLRSECKGERV-SNP 221 (285)
Q Consensus 158 ~Dg~~~~~fl~~wa~~~rg~~~~~~P-~p~--------------~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~-~~~ 221 (285)
+||.|+.+|+++||++|||...+..| |+. ++....+...++|+|++++|++||+.+.++.. .++
T Consensus 163 ~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~ 242 (421)
T 2bgh_A 163 ADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNTPSPELVPDENVVMKRFVFDKEKIGALRAQASSASEEKNF 242 (421)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTCCCCCCCCCSSEEEEEEEECHHHHHHHHHHTC-----CCC
T ss_pred chHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccCCCCccCCccceEEEEEEECHHHHHHHHHHhhccCCCCCC
Confidence 99999999999999999997533233 221 11123467899999999999999999986543 689
Q ss_pred ChhhhhHHHHHHHHHHhhcCC--CCCcEEEEEEecCcCcCCCCCCcCccccceeeccccccccc
Q 048698 222 TRIEALSAFILKSAMLASRST--ANSRFVLHQAVNLRRLTEPRLSTYTVGNLFLFASAAYNMEH 283 (285)
Q Consensus 222 St~dal~A~iW~~~~~ar~~~--~~~~~~l~~~vd~R~r~~p~lp~~Y~GN~~~~~~~~~~~~~ 283 (285)
||||+|+|++|+|+++||+.. +++.+++.++||+|+|++||+|++|+||++..+.+.+++++
T Consensus 243 St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~ 306 (421)
T 2bgh_A 243 SRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW 306 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC
T ss_pred chhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc
Confidence 999999999999999998653 45789999999999999999999999999999998887754
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.1e-56 Score=420.99 Aligned_cols=281 Identities=20% Similarity=0.236 Sum_probs=228.9
Q ss_pred eEEEEeeeeeeCCCCCCCCCccccCCcCcCCCC-CCCccEEEEecCCCCCCC--ccchHHHHHHHHHHhhccccCCCcee
Q 048698 2 EISIVSKEVVRPSSLDFHLLKPFKISLLDQLTP-TTFSPLILFYPMRNTHLK--GAQISTQLKESLSKTLDHLYPFAGRV 78 (285)
Q Consensus 2 ~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~--~~~~~~~Lk~sL~~~L~~~p~laGrl 78 (285)
+|+|+++++|+|+.|+++ .+.++||+||+.+. ..|++.+|||+.++.. + .+..+++||+||+++|++||||||||
T Consensus 1 ~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 78 (453)
T 2xr7_A 1 MASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISR-PDFVQTIIPTLKDSLSLTLKYYLPLAGNV 78 (453)
T ss_dssp -CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCS-HHHHHTHHHHHHHHHHHHHTTSGGGGSCC
T ss_pred CeEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCC-chhHHHHHHHHHHHHHHHhhhccccCeeE
Confidence 489999999999987554 47899999999754 5699999999975421 1 34578999999999999999999999
Q ss_pred c------CceEEEeC-CCCeeEEEEEEeeccccccC-C-CCcccccccCCCCCCCCCC-CCCCCCeEEEEEeEEecCcEE
Q 048698 79 R------DNLIINDY-DEGVPYIETRVNTHLFEFLQ-N-PPMELLDQCLPYPPLSYQP-NSDQVPQAAVQLNIFDCGGIA 148 (285)
Q Consensus 79 ~------~~~~i~~~-~~gv~f~~a~~~~~~~~l~~-~-p~~~~~~~l~p~~~~~~~~-~~~~~Pll~vQvt~f~cGG~~ 148 (285)
+ ++++|+|+ ++||.|++|++|.+++++.+ . ++...++.|+|..+..... ...+.|++.+|||+|+|||++
T Consensus 79 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~ 158 (453)
T 2xr7_A 79 ACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGIS 158 (453)
T ss_dssp EEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEE
T ss_pred EccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEE
Confidence 4 26899999 59999999999999999875 2 2344567788865321000 011279999999999999999
Q ss_pred EEeeeccccccHHHHHHHHHHHHHHhc-CCCC----C-ccc-cC------Cc---------c-------c-----cCCCc
Q 048698 149 LGLCLSHKIIDGATASGFLRSWAANSR-GACH----E-AVT-YK------NI---------W-------F-----REANS 194 (285)
Q Consensus 149 l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~~----~-~~P-~p------~~---------~-------~-----~~~~~ 194 (285)
||+++||.++||.|+.+|+++||++|| |... + ..| ++ |+ + . ...+.
T Consensus 159 lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (453)
T 2xr7_A 159 IGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDK 238 (453)
T ss_dssp EEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSC
T ss_pred EEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCCc
Confidence 999999999999999999999999999 7621 1 123 11 11 1 0 12345
Q ss_pred cEEEEEeChHHHHHHHHhcccCCC--CCCChhhhhHHHHHHHHHHhhcC-----CCCCcEEEEEEecCcCcCCCCCCcCc
Q 048698 195 KTRRFVFDAKAIASLRSECKGERV--SNPTRIEALSAFILKSAMLASRS-----TANSRFVLHQAVNLRRLTEPRLSTYT 267 (285)
Q Consensus 195 ~~~~f~~~~~~l~~Lk~~~~~~~~--~~~St~dal~A~iW~~~~~ar~~-----~~~~~~~l~~~vd~R~r~~p~lp~~Y 267 (285)
..++|+|++++|++||+.+.++.. .++||||+|+|++|+|+++||+. ++++.+++.++||+|+|++||+|++|
T Consensus 239 ~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y 318 (453)
T 2xr7_A 239 VRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSY 318 (453)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTB
T ss_pred eEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCccc
Confidence 689999999999999999976432 68999999999999999999976 56789999999999999999999999
Q ss_pred cccceeecccccccccc
Q 048698 268 VGNLFLFASAAYNMEHA 284 (285)
Q Consensus 268 ~GN~~~~~~~~~~~~~~ 284 (285)
+||++..+.+.++++|+
T Consensus 319 ~GN~~~~~~~~~~~~el 335 (453)
T 2xr7_A 319 FGNALVGYVARTRQVDL 335 (453)
T ss_dssp CSCCCCEEEEEEEHHHH
T ss_pred ccceeeeeeeeeeHHHh
Confidence 99999999998888765
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.4e-55 Score=413.56 Aligned_cols=280 Identities=20% Similarity=0.281 Sum_probs=229.0
Q ss_pred CeEEEEeeeeeeCCCCCCCCCccccCCcCcCCCC-CCCccEEEEecCCCCCCC--ccchHHHHHHHHHHhhccccCCCce
Q 048698 1 MEISIVSKEVVRPSSLDFHLLKPFKISLLDQLTP-TTFSPLILFYPMRNTHLK--GAQISTQLKESLSKTLDHLYPFAGR 77 (285)
Q Consensus 1 ~~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~--~~~~~~~Lk~sL~~~L~~~p~laGr 77 (285)
.+|+|+++++|+|+.|+++ .+.++||+||+.+. ..|++.+|||+.++.. + .+..+++||+||+++|++|||||||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~Lk~sLs~~L~~~~plAGR 82 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITR-SQFTETVVPNIKHSLSITLKHFYPFVGK 82 (454)
T ss_dssp -CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCH-HHHHHTHHHHHHHHHHHHHTTCGGGGSE
T ss_pred ceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCc-chhhHHHHHHHHHHHHHHhhhcccccee
Confidence 3699999999999987554 47899999999855 5699999999965421 1 3457899999999999999999999
Q ss_pred ec--C----ceEEEeC-CCCeeEEEEEEeeccccccCC-C-CcccccccCCCCCCCCC-CCCCCCCeEEEEEeEEecCcE
Q 048698 78 VR--D----NLIINDY-DEGVPYIETRVNTHLFEFLQN-P-PMELLDQCLPYPPLSYQ-PNSDQVPQAAVQLNIFDCGGI 147 (285)
Q Consensus 78 l~--~----~~~i~~~-~~gv~f~~a~~~~~~~~l~~~-p-~~~~~~~l~p~~~~~~~-~~~~~~Pll~vQvt~f~cGG~ 147 (285)
|+ . +++|+|+ ++||.|++|+++.+++++.+. + +...++.|+|..+.... .+..+.|++.+|||+|+|||+
T Consensus 83 l~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~ 162 (454)
T 2e1v_A 83 LVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGI 162 (454)
T ss_dssp EEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEE
T ss_pred eeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcE
Confidence 97 2 6899999 599999999999999999753 2 33456778887542110 112345999999999999999
Q ss_pred EEEeeeccccccHHHHHHHHHHHHHHhc-CCC-C-----Cccc-cC-----Cc--------c-----------c---cCC
Q 048698 148 ALGLCLSHKIIDGATASGFLRSWAANSR-GAC-H-----EAVT-YK-----NI--------W-----------F---REA 192 (285)
Q Consensus 148 ~l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~-~-----~~~P-~p-----~~--------~-----------~---~~~ 192 (285)
+||+++||.++||.|+.+|+++||++|| |.. . ...| ++ |+ + . ...
T Consensus 163 ~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (454)
T 2e1v_A 163 AIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDRIIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPS 242 (454)
T ss_dssp EEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCCCCCCHHHHHHHHHHTTCTTHHHHCCCCCCCCCC
T ss_pred EEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccccCCCCCcchHHHHhhhccccccccCcccCCCCC
Confidence 9999999999999999999999999999 763 1 1123 11 00 0 0 123
Q ss_pred CccEEEEEeChHHHHHHHHhcccCCC--CCCChhhhhHHHHHHHHHHhhcCCCCCcEEEEEEecCcCcCCCCCCcCcccc
Q 048698 193 NSKTRRFVFDAKAIASLRSECKGERV--SNPTRIEALSAFILKSAMLASRSTANSRFVLHQAVNLRRLTEPRLSTYTVGN 270 (285)
Q Consensus 193 ~~~~~~f~~~~~~l~~Lk~~~~~~~~--~~~St~dal~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~r~~p~lp~~Y~GN 270 (285)
+...++|+|++++|++||+++.++.. .++||||+|+||+|+|+++|| +++.+++.++||+|+|++||+|++|+||
T Consensus 243 ~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~vd~R~rl~pplP~~Y~GN 319 (454)
T 2e1v_A 243 DKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPIDRRARMKPPIPTAYFGN 319 (454)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEEECGGGSSSCCCTTBCSC
T ss_pred CceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEEecchhccCCCCCcccccc
Confidence 56789999999999999999975432 579999999999999999998 5689999999999999999999999999
Q ss_pred ceeeccccccccccC
Q 048698 271 LFLFASAAYNMEHAA 285 (285)
Q Consensus 271 ~~~~~~~~~~~~~~~ 285 (285)
++..+.+.++++|++
T Consensus 320 ~~~~~~~~~~~~el~ 334 (454)
T 2e1v_A 320 CVGGCAAIAKTNLLI 334 (454)
T ss_dssp CEEEEEEEEEGGGTS
T ss_pred eeeeEEeecchhhcc
Confidence 999999999988763
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2e-46 Score=351.04 Aligned_cols=257 Identities=19% Similarity=0.241 Sum_probs=198.6
Q ss_pred cccCCcCcCCC--CCCCccEEEEecCCCCCCCccchHHHHHHHHHHhhccccCCCceecC---------ceEEEeCCCCe
Q 048698 23 PFKISLLDQLT--PTTFSPLILFYPMRNTHLKGAQISTQLKESLSKTLDHLYPFAGRVRD---------NLIINDYDEGV 91 (285)
Q Consensus 23 ~~~LS~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~---------~~~i~~~~~gv 91 (285)
.++||.|||++ ++.|++.+|||+.++.. +.+..+++||+||+++|++||||||||+. +++|+|++.++
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~-~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~ 82 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSS-QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVP 82 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGG-GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSC
T ss_pred cccCChhhcCccccccceeEEEEEECCCCC-CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCC
Confidence 37999999997 58999999999964321 24567899999999999999999999862 47888877666
Q ss_pred eEEEEEEee-----ccccccC--CCCccccc--ccCCCCCCCCC--C-CCCCCCeEEEEEeEEecCcEEEEeeecccccc
Q 048698 92 PYIETRVNT-----HLFEFLQ--NPPMELLD--QCLPYPPLSYQ--P-NSDQVPQAAVQLNIFDCGGIALGLCLSHKIID 159 (285)
Q Consensus 92 ~f~~a~~~~-----~~~~l~~--~p~~~~~~--~l~p~~~~~~~--~-~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~D 159 (285)
.|++++++. +++++.+ .|. ..++ .|.|....+.. . ...+.|++.+|||+| |||++||+++||.++|
T Consensus 83 ~~~va~~~~d~~~p~~~~l~~~~~p~-~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~D 160 (451)
T 2rkv_A 83 RVVVKDLRDDPSAPTIEGMRKAGYPM-AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAMD 160 (451)
T ss_dssp EEEEEECTTCTTSCBHHHHHHHTSCG-GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTCC
T ss_pred eEEEEeCCCCCCCCCHHHHHHcCCCh-hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhcccc
Confidence 699988764 5666653 232 1111 23333211100 1 133589999999955 7999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCc-------------cc-c---CC-cc----------------ccCCCccEEEEEeChHH
Q 048698 160 GATASGFLRSWAANSRGACHEA-------------VT-Y---KN-IW----------------FREANSKTRRFVFDAKA 205 (285)
Q Consensus 160 g~~~~~fl~~wa~~~rg~~~~~-------------~P-~---p~-~~----------------~~~~~~~~~~f~~~~~~ 205 (285)
|.|+.+|+++||++|||...+. .| + +| +. ....+...++|+|++++
T Consensus 161 g~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~ 240 (451)
T 2rkv_A 161 MVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKA 240 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHH
Confidence 9999999999999999965211 11 1 01 00 01234678999999999
Q ss_pred HHHHHHhcccCC---CCCCChhhhhHHHHHHHHHHhh-c-CCCCCcEEEEEEecCcCcCCCCCCcCccccceeecccccc
Q 048698 206 IASLRSECKGER---VSNPTRIEALSAFILKSAMLAS-R-STANSRFVLHQAVNLRRLTEPRLSTYTVGNLFLFASAAYN 280 (285)
Q Consensus 206 l~~Lk~~~~~~~---~~~~St~dal~A~iW~~~~~ar-~-~~~~~~~~l~~~vd~R~r~~p~lp~~Y~GN~~~~~~~~~~ 280 (285)
|++||+++.++. ..++||||+|+||+|+|+++|| . .++++.+++.++||+|+|++ +|.+|+||++..+.+.++
T Consensus 241 i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~ 318 (451)
T 2rkv_A 241 MSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNST 318 (451)
T ss_dssp HHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEEE
T ss_pred HHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecccCc
Confidence 999999998653 3679999999999999999998 3 56678999999999999997 899999999999999888
Q ss_pred cccc
Q 048698 281 MEHA 284 (285)
Q Consensus 281 ~~~~ 284 (285)
++|+
T Consensus 319 ~~el 322 (451)
T 2rkv_A 319 IGEI 322 (451)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.84 E-value=1.8e-07 Score=85.34 Aligned_cols=226 Identities=14% Similarity=0.106 Sum_probs=136.2
Q ss_pred ccccCCcCcCCCC-C-CCccEEEEecCCCCCCCccchHHHHHHHHHHhhccccCCCceecCceEEEeCCCC-eeEEEEEE
Q 048698 22 KPFKISLLDQLTP-T-TFSPLILFYPMRNTHLKGAQISTQLKESLSKTLDHLYPFAGRVRDNLIINDYDEG-VPYIETRV 98 (285)
Q Consensus 22 ~~~~LS~lD~~~~-~-~y~~~~~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~~~~i~~~~~g-v~f~~a~~ 98 (285)
..++||++.+.+. . .++...+-++.+ .+.++|++++.+++..+|.|-.++.. .+.+ ...+....
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~-------ld~~~l~~A~~~lv~rh~~LRt~f~~------~~~~~~q~v~~~~ 72 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGV-------IDVDALSDAFDALLETHPVLASHLEQ------SSDGGWNLVADDL 72 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESC-------CCHHHHHHHHHHHHHHCGGGSEEEEE------CTTSSEEEEECCS
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecC-------CCHHHHHHHHHHHHHhCccceEEEEe------cCCcceeeeccCC
Confidence 4688888876443 2 233344444432 45899999999999999999877741 1111 11111111
Q ss_pred ee---ccccccCCCCcccccccCCCCCCCCCCCCCCCCeEEEEEeEEecCcEEEEeeeccccccHHHHHHHHHHHHHHhc
Q 048698 99 NT---HLFEFLQNPPMELLDQCLPYPPLSYQPNSDQVPQAAVQLNIFDCGGIALGLCLSHKIIDGATASGFLRSWAANSR 175 (285)
Q Consensus 99 ~~---~~~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 175 (285)
+. ...++........... . ..+ -+ ...|++.+.+.. ..++..|.+.+||.++||.|+..|++.|.+.++
T Consensus 73 ~~~~~~~~d~~~~~~~~~~~~-~-~~~----~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 73 LHSGICVIDGTAATNGSPSGN-A-ELR----LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp SSCCCEEEC-------------C-CCC----CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCCcchhhhc-c-cCc----cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 10 1112211111001100 0 011 12 467889888777 668899999999999999999999999999886
Q ss_pred -----CCCCCc--cccC-------------------------Cccc----------------cCCCccEEEEEeChHHHH
Q 048698 176 -----GACHEA--VTYK-------------------------NIWF----------------REANSKTRRFVFDAKAIA 207 (285)
Q Consensus 176 -----g~~~~~--~P~p-------------------------~~~~----------------~~~~~~~~~f~~~~~~l~ 207 (285)
|...+. .+|. ..|. .........+.++.+..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~ 224 (422)
T 1q9j_A 145 DAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTS 224 (422)
T ss_dssp HHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHH
T ss_pred HhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHH
Confidence 332211 1221 0010 001124567789999999
Q ss_pred HHHHhcccCCCCCCChhhhhHHHHHHHHHHhhcCCCCCcEEEEEEecCcCcCCCCCC----cCccccce
Q 048698 208 SLRSECKGERVSNPTRIEALSAFILKSAMLASRSTANSRFVLHQAVNLRRLTEPRLS----TYTVGNLF 272 (285)
Q Consensus 208 ~Lk~~~~~~~~~~~St~dal~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~r~~p~lp----~~Y~GN~~ 272 (285)
+|++.+.. ..+|.++++.|.+-..+.+.+. .......+..++++|....|+++ .+.+|.++
T Consensus 225 ~l~~~a~~---~~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~ 289 (422)
T 1q9j_A 225 DLMAFGRE---HRLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAAS 289 (422)
T ss_dssp HHHHHHTT---TTCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEE
T ss_pred HHHHHHHH---hCCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCCChhhhhhhheeee
Confidence 99999874 4689999999987766665522 23467889999999998765432 33455444
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.36 E-value=1.8e-05 Score=72.30 Aligned_cols=199 Identities=14% Similarity=0.042 Sum_probs=123.2
Q ss_pred chHHHHHHHHHHhhccccCCCceecCceEEEeCCCCeeEEEEEEeeccccccCCCCc-cccc----cc--CCCCCCCCCC
Q 048698 55 QISTQLKESLSKTLDHLYPFAGRVRDNLIINDYDEGVPYIETRVNTHLFEFLQNPPM-ELLD----QC--LPYPPLSYQP 127 (285)
Q Consensus 55 ~~~~~Lk~sL~~~L~~~p~laGrl~~~~~i~~~~~gv~f~~a~~~~~~~~l~~~p~~-~~~~----~l--~p~~~~~~~~ 127 (285)
.+.++|++++.+++..++.|--++...-.+......+.+ .+.++...++. .... .. -|..
T Consensus 33 ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~v~~~~~~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~fd------ 99 (436)
T 1l5a_A 33 LDTTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPPI-------DYQDLSIHLEAEPLAWRQIEQDLQRSST------ 99 (436)
T ss_dssp CCHHHHHHHHHHHHHTCGGGGEEECTTCCEEECSSCCCC-------EEEECTTCTTHHHHHHHHHHHHHTSCCC------
T ss_pred CCHHHHHHHHHHHHHHhheeEEEEEecCCeECCCcCCCc-------cEEeCCCCCCHHHHHHHHHHHHhcCCCC------
Confidence 458999999999999999997776421001111111111 11122221111 0011 11 1211
Q ss_pred CCCCCCeEEEEEeEEecCcEEEEeeeccccccHHHHHHHHHHHHHHhc----CCCCCc--cccC-----------C----
Q 048698 128 NSDQVPQAAVQLNIFDCGGIALGLCLSHKIIDGATASGFLRSWAANSR----GACHEA--VTYK-----------N---- 186 (285)
Q Consensus 128 ~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~--~P~p-----------~---- 186 (285)
....|++.+.+-....+...|.+.+||.++||.|+..|++.+.+.++ |...+. .+|. .
T Consensus 100 -l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (436)
T 1l5a_A 100 -LIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYW 178 (436)
T ss_dssp -CBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHH
T ss_pred -cCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHH
Confidence 23558888877766667899999999999999999999999999887 443221 1110 0
Q ss_pred ----cc------------cc------CCCccEEEEEeChHHHHHHHHhcccCCCCCCChhhhhHHHHHHHHHHhhcCCCC
Q 048698 187 ----IW------------FR------EANSKTRRFVFDAKAIASLRSECKGERVSNPTRIEALSAFILKSAMLASRSTAN 244 (285)
Q Consensus 187 ----~~------------~~------~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~St~dal~A~iW~~~~~ar~~~~~ 244 (285)
.| .+ ........+.++.+..++|++.+.. ..+|.+.++.|.+-..+.+.. .
T Consensus 179 ~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~L~~~~---g- 251 (436)
T 1l5a_A 179 QDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA---NQIGWPDALVALCALYLESAE---P- 251 (436)
T ss_dssp HHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHS---T-
T ss_pred HHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHhh---C-
Confidence 01 00 1123466788999999999998875 458899999887655555542 2
Q ss_pred CcEEEEEEecCcCcCCCCCCcCccccceeeccc
Q 048698 245 SRFVLHQAVNLRRLTEPRLSTYTVGNLFLFASA 277 (285)
Q Consensus 245 ~~~~l~~~vd~R~r~~p~lp~~Y~GN~~~~~~~ 277 (285)
+...+..++++|..- --.+-+|+++...-.
T Consensus 252 ~dv~ig~~~~~R~~~---~~~~~vG~f~n~lpl 281 (436)
T 1l5a_A 252 DAPWLWLPFMNRWGS---VAANVPGLMVNSLPL 281 (436)
T ss_dssp TCCEEEEEECCCTTS---GGGGSCSCCCEEEEE
T ss_pred CceEEeeecccCCCh---HHhcCcceEEEEEEE
Confidence 567899999999752 234556666554433
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.36 E-value=4.5e-05 Score=71.57 Aligned_cols=229 Identities=13% Similarity=0.099 Sum_probs=136.5
Q ss_pred CccccCCcCcC-------CCC--CCC-ccEEEEecCCCCCCCccchHHHHHHHHHHhhccccCCCceecC---ce-EEEe
Q 048698 21 LKPFKISLLDQ-------LTP--TTF-SPLILFYPMRNTHLKGAQISTQLKESLSKTLDHLYPFAGRVRD---NL-IIND 86 (285)
Q Consensus 21 ~~~~~LS~lD~-------~~~--~~y-~~~~~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~---~~-~i~~ 86 (285)
...++||+.-+ ..+ ..| +...+-++.. .+.++|++++.+++..++.|--++.. .+ .+..
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~-------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~ 166 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK-------LERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIH 166 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC-------CCHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC-------CCHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEEC
Confidence 35688886543 112 123 4444445432 45899999999999999999777641 11 1111
Q ss_pred CCCCeeEEEEEEeeccccccCCCCcccccccCCCCCCCCCCCCCCCCeEEEEEeEEecCcEEEEeeeccccccHHHHHHH
Q 048698 87 YDEGVPYIETRVNTHLFEFLQNPPMELLDQCLPYPPLSYQPNSDQVPQAAVQLNIFDCGGIALGLCLSHKIIDGATASGF 166 (285)
Q Consensus 87 ~~~gv~f~~a~~~~~~~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~~~~~f 166 (285)
.+..+.+...+ .+-+++.. .....-. ++ +....|++.+.+-....+...|-+.+||.++||.|+..|
T Consensus 167 ~~~~~~~~~~~--~~~~~~~~------~~~~~~~-~f----dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l 233 (520)
T 2jgp_A 167 EDVPFALAYSE--VTEEEARE------LVSSLVQ-PF----DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGIL 233 (520)
T ss_dssp SCCCCCCEEEE--CCHHHHHH------HHHHTCC-CC----CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHH
T ss_pred CCCCCceEEEe--CCHHHHHH------HHHHhcC-CC----CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHH
Confidence 11111111111 11001100 1011100 11 123568888877776657789999999999999999999
Q ss_pred HHHHHHHhcCCCCCccc--cC----------C---------cc-------------c---c-----CCCccEEEEEeChH
Q 048698 167 LRSWAANSRGACHEAVT--YK----------N---------IW-------------F---R-----EANSKTRRFVFDAK 204 (285)
Q Consensus 167 l~~wa~~~rg~~~~~~P--~p----------~---------~~-------------~---~-----~~~~~~~~f~~~~~ 204 (285)
++.+.+.+++...+..| |. . .| + . ........+.++.+
T Consensus 234 ~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~ 313 (520)
T 2jgp_A 234 LAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKA 313 (520)
T ss_dssp HHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHH
T ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHH
Confidence 99999999886422211 10 0 01 0 0 01124567788999
Q ss_pred HHHHHHHhcccCCCCCCChhhhhHHHHHHHHHHhhcCCCCCcEEEEEEecCcCcCCCCCCcCccccceeecccc
Q 048698 205 AIASLRSECKGERVSNPTRIEALSAFILKSAMLASRSTANSRFVLHQAVNLRRLTEPRLSTYTVGNLFLFASAA 278 (285)
Q Consensus 205 ~l~~Lk~~~~~~~~~~~St~dal~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~r~~p~lp~~Y~GN~~~~~~~~ 278 (285)
..++|++.+.. ..+|.+.++.|.+-..+.+..+ .+...+..++++|..-+ -.+-+|+++...-.+
T Consensus 314 ~~~~l~~~a~~---~~~T~~~~l~aa~a~~L~~~~~---~~dv~~g~~~~gR~~~~---~~~~vG~f~n~lplr 378 (520)
T 2jgp_A 314 LTEGLHQLAQA---TGTTLYMVLLAAYNVLLAKYAG---QEDIIVGTPITGRSHAD---LEPIVGMFVNTLAMR 378 (520)
T ss_dssp HHHHHHHHHHH---HTCCHHHHHHHHHHHHHHHHHT---CSCEEEEEEECCCCSGG---GTTCCSCCCEEEEEE
T ss_pred HHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC---CCCeEEEeccCCCCchh---hhccEEeeeeeeeEE
Confidence 99999998874 3588899998876655555532 36789999999997621 245566665544333
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.18 E-value=2e-05 Score=73.40 Aligned_cols=234 Identities=13% Similarity=0.059 Sum_probs=133.7
Q ss_pred ccccCCcCcC-------CCCCCCccEEEEecCCCCCCCccchHHHHHHHHHHhhccccCCCceecC---ceEEEeCCCCe
Q 048698 22 KPFKISLLDQ-------LTPTTFSPLILFYPMRNTHLKGAQISTQLKESLSKTLDHLYPFAGRVRD---NLIINDYDEGV 91 (285)
Q Consensus 22 ~~~~LS~lD~-------~~~~~y~~~~~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~---~~~i~~~~~gv 91 (285)
..++||+.-+ ..+.......+.|+.... .+.++|++++.+++..++.|--++.. ...+..... +
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~~-~ 85 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR-----IDDDRLAAAADEVLDAFPLLRVNFVDDDGLWMRTRENA-D 85 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS-----CCHHHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSCC-C
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC-----CCHHHHHHHHHHHHHhchhceeEEEccCCEEEEecCCC-C
Confidence 4678887543 222111233344444332 46899999999999999999777642 111111111 2
Q ss_pred eEEEEEEeeccccccCCCCc-cccc----ccCCCCCCCCCCCCCCCCeEEEEEeEEecCcEEEEeeeccccccHHHHHHH
Q 048698 92 PYIETRVNTHLFEFLQNPPM-ELLD----QCLPYPPLSYQPNSDQVPQAAVQLNIFDCGGIALGLCLSHKIIDGATASGF 166 (285)
Q Consensus 92 ~f~~a~~~~~~~~l~~~p~~-~~~~----~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~~~~~f 166 (285)
.+.+. ++...++. .... ...-. ++ +....|++.+.+-....+...|.+.+||.++||.|+..+
T Consensus 86 ~~~~~-------d~~~~~~~~~~~~~~~~~~~~~-~f----dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l 153 (493)
T 4hvm_A 86 ALVRS-------DLRGHPDPQARCVELLRADRDR-PT----DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMV 153 (493)
T ss_dssp CEEEE-------ECTTSSSHHHHHHHHHHHHHSS-CC----CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHH
T ss_pred CceEE-------ECCCCCchHHHHHHHHHHHhcC-CC----CCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHH
Confidence 22221 22221111 1111 11100 01 123558888877766656689999999999999999999
Q ss_pred HHHHHHHhcCCCCCccccC-------C--------------ccc---c-----------CCCccEEEEEeChHHHHHHHH
Q 048698 167 LRSWAANSRGACHEAVTYK-------N--------------IWF---R-----------EANSKTRRFVFDAKAIASLRS 211 (285)
Q Consensus 167 l~~wa~~~rg~~~~~~P~p-------~--------------~~~---~-----------~~~~~~~~f~~~~~~l~~Lk~ 211 (285)
++.+.+.+.|...+ .+|. . .|. . ........+.++.+..++|++
T Consensus 154 ~~~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~l~~ 232 (493)
T 4hvm_A 154 LGAVWQAYYGRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRGGDGGPVGPPETSRLRVPGSRWQALTE 232 (493)
T ss_dssp HHHHHHHHTTCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC-------CCEEEEEEEEHHHHHHHHC
T ss_pred HHHHHHHhCCCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCCCCCCCCCCCeeEEEEcCHHHHHHHHH
Confidence 99999999776532 2211 0 010 0 011345678899999999998
Q ss_pred hcccCCCCCCC--hhhhhHHHHHHHHHHhhcC--------CCCCcEEEEEEecCcCcCCCCCCcCccccceeecccccc
Q 048698 212 ECKGERVSNPT--RIEALSAFILKSAMLASRS--------TANSRFVLHQAVNLRRLTEPRLSTYTVGNLFLFASAAYN 280 (285)
Q Consensus 212 ~~~~~~~~~~S--t~dal~A~iW~~~~~ar~~--------~~~~~~~l~~~vd~R~r~~p~lp~~Y~GN~~~~~~~~~~ 280 (285)
.+.. ..+| .+.++.|.+-..+.+-+.. ...+...+..++++|..- --.+.+|+++...-....
T Consensus 233 ~a~~---~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~ 305 (493)
T 4hvm_A 233 PGGP---LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---QLGSVVGPLTDRVVFGVD 305 (493)
T ss_dssp C---------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---TCCSBCSCCEEEEEEEEE
T ss_pred HHHH---cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---chhcCeEeeeceeEEEEe
Confidence 8874 4578 8999888766555544110 223678999999999762 245667777655444433
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.01 E-value=0.0013 Score=60.39 Aligned_cols=231 Identities=13% Similarity=0.083 Sum_probs=132.7
Q ss_pred CccccCCcCcC-----CCC-CCCccEEEEecCCCCCCCccchHHHHHHHHHHhhccccCCCceecC---ce-EEEeC--C
Q 048698 21 LKPFKISLLDQ-----LTP-TTFSPLILFYPMRNTHLKGAQISTQLKESLSKTLDHLYPFAGRVRD---NL-IINDY--D 88 (285)
Q Consensus 21 ~~~~~LS~lD~-----~~~-~~y~~~~~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~laGrl~~---~~-~i~~~--~ 88 (285)
...++||+..+ ..+ .......+.|+.... .+.+.|+++|.+++..++.|--++.. .+ .+... .
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~ 89 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG-----FDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGG 89 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC-----CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSS
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC-----CCHHHHHHHHHHHHHhChHhheEEecCCCceeeecccccc
Confidence 35678887543 222 122233344444332 46899999999999999999777652 11 11111 1
Q ss_pred CCeeEEEEEEeeccccccCCCCcc-cc----ccc-CCCCCCCCCCCCCCCCeEEEEEeEEecCcEEEEeeeccccccHHH
Q 048698 89 EGVPYIETRVNTHLFEFLQNPPME-LL----DQC-LPYPPLSYQPNSDQVPQAAVQLNIFDCGGIALGLCLSHKIIDGAT 162 (285)
Q Consensus 89 ~gv~f~~a~~~~~~~~l~~~p~~~-~~----~~l-~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~~ 162 (285)
..+.+.+. |+....+.. .. +.+ -|.. ....|++.+.+-... ++-.|-+.+||.++||.|
T Consensus 90 ~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~fd-------l~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S 154 (466)
T 2xhg_A 90 QLYDFFSY-------NLTAQPDVQQAIEAETQRLHSSMN-------LQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGIS 154 (466)
T ss_dssp CCCEEEEE-------ECTTCSCHHHHHHHHHHHHHTTCC-------TTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHH
T ss_pred ccceeEEE-------ecCCcccHHHHHHHHHHHHHhccC-------CCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhh
Confidence 11222111 121111100 00 011 1211 235688888777666 444467999999999999
Q ss_pred HHHHHHHHHHHhc----CCCCC--cc--ccC-----------C--------cc-----------c----c-----CCCcc
Q 048698 163 ASGFLRSWAANSR----GACHE--AV--TYK-----------N--------IW-----------F----R-----EANSK 195 (285)
Q Consensus 163 ~~~fl~~wa~~~r----g~~~~--~~--P~p-----------~--------~~-----------~----~-----~~~~~ 195 (285)
+..|++.+.+.++ |.... .. +|. . .| . . .....
T Consensus 155 ~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~ 234 (466)
T 2xhg_A 155 WRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVR 234 (466)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccccccccccccce
Confidence 9999999998875 33211 11 110 0 01 0 0 01123
Q ss_pred EEEEEeChHHHHHHHHhcccCCCCCCChhhhhHHHHHHHHHHhhcCCCCCcEEEEEEecCcCcCCC-CCCcCccccceee
Q 048698 196 TRRFVFDAKAIASLRSECKGERVSNPTRIEALSAFILKSAMLASRSTANSRFVLHQAVNLRRLTEP-RLSTYTVGNLFLF 274 (285)
Q Consensus 196 ~~~f~~~~~~l~~Lk~~~~~~~~~~~St~dal~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~r~~p-~lp~~Y~GN~~~~ 274 (285)
...+.++++..++|++.+... ..+|.++++.|.+-..+.+..+ .+...+..++++|....+ +--.+-+|+++..
T Consensus 235 ~~~~~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~---~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~ 309 (466)
T 2xhg_A 235 NMRIRLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWSK---LAQIVIHLEGHGREDIIEQANVARTVGWFTSQ 309 (466)
T ss_dssp EEEEECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC---CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEE
T ss_pred EEEEEcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC---CCceEEEecCCCCCccccCCCccccccceeee
Confidence 567889999999998877532 3578899998877666665532 356889999999986421 1234556665544
Q ss_pred cc
Q 048698 275 AS 276 (285)
Q Consensus 275 ~~ 276 (285)
.-
T Consensus 310 lp 311 (466)
T 2xhg_A 310 YP 311 (466)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.72 E-value=0.0015 Score=68.07 Aligned_cols=202 Identities=13% Similarity=0.032 Sum_probs=123.0
Q ss_pred chHHHHHHHHHHhhccccCCCceecCceEEEeCCC--CeeEEEEEEee--ccccccCCCCc---cccccc------CCCC
Q 048698 55 QISTQLKESLSKTLDHLYPFAGRVRDNLIINDYDE--GVPYIETRVNT--HLFEFLQNPPM---ELLDQC------LPYP 121 (285)
Q Consensus 55 ~~~~~Lk~sL~~~L~~~p~laGrl~~~~~i~~~~~--gv~f~~a~~~~--~~~~l~~~p~~---~~~~~l------~p~~ 121 (285)
.+.+.|++++.+++..++.|--++.. .+. .+..+....+. .+-|+...+.. ..+..+ -|..
T Consensus 47 ld~~~l~~A~~~lv~rH~~LRt~f~~------~~~~~p~Q~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fd 120 (1304)
T 2vsq_A 47 LNIKCLEESMNVIMDRYDVFRTVFIH------EKVKRPVQVVLKKRQFHIEEIDLTHLTGSEQTAKINEYKEQDKIRGFD 120 (1304)
T ss_dssp CCHHHHHHHHHHHHHHCGGGGEEEEC------SSCSSCEEEEESCCCCCEEEEECTTSCHHHHHHHHHHHHHHHHHHCCC
T ss_pred cCHHHHHHHHHHHHHhhhhceEEEEE------cCCCeEEEEECCCCCCceEEEECCCCCchhHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999999666541 111 11111111111 11222221110 011111 1221
Q ss_pred CCCCCCCCCCCCeEEEEEeEEecCcEEEEeeeccccccHHHHHHHHHHHHHHhcC----CCCC--cc-ccC---------
Q 048698 122 PLSYQPNSDQVPQAAVQLNIFDCGGIALGLCLSHKIIDGATASGFLRSWAANSRG----ACHE--AV-TYK--------- 185 (285)
Q Consensus 122 ~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~--~~-P~p--------- 185 (285)
....|++++.+-....+...|-+.+||.++||.|+..+++.+++.+++ .... .. +|.
T Consensus 121 -------l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~ 193 (1304)
T 2vsq_A 121 -------LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQ 193 (1304)
T ss_dssp -------TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTS
T ss_pred -------CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcc
Confidence 235688988887777678899999999999999999999999988763 2211 11 111
Q ss_pred -----------------Cc-cc---c-----CCCccEEEEEeChHHHHHHHHhcccCCCCCCChhhhhHHHHHHHHHHhh
Q 048698 186 -----------------NI-WF---R-----EANSKTRRFVFDAKAIASLRSECKGERVSNPTRIEALSAFILKSAMLAS 239 (285)
Q Consensus 186 -----------------~~-~~---~-----~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~St~dal~A~iW~~~~~ar 239 (285)
++ .. . ........|.++++..++||+.+.. ..+|.+.++.|.+-..+.|--
T Consensus 194 ~~~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~---~~~T~~~vllaa~a~~L~r~t 270 (1304)
T 2vsq_A 194 DKQASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKS---QHTTLSTALQAVWSVLISRYQ 270 (1304)
T ss_dssp CHHHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhc
Confidence 00 00 0 0112345677899999999999875 358889998886655555443
Q ss_pred cCCCCCcEEEEEEecCcCcCCCCCCcCccccceeecc
Q 048698 240 RSTANSRFVLHQAVNLRRLTEPRLSTYTVGNLFLFAS 276 (285)
Q Consensus 240 ~~~~~~~~~l~~~vd~R~r~~p~lp~~Y~GN~~~~~~ 276 (285)
+ .+...+..++++|..-.+.+ ++-+|+.+...-
T Consensus 271 g---~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlp 303 (1304)
T 2vsq_A 271 Q---SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVP 303 (1304)
T ss_dssp T---CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEE
T ss_pred C---CCCEEEEEEeCCCCccchhh-hcccccceeEEE
Confidence 2 36789999999997632222 445566554443
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.58 E-value=0.00046 Score=64.99 Aligned_cols=131 Identities=11% Similarity=0.005 Sum_probs=87.1
Q ss_pred cEEEEeeeccccccHHHHHHHHHHHHHHhcCCC-------CCc---------c-c-------cC---C-c----------
Q 048698 146 GIALGLCLSHKIIDGATASGFLRSWAANSRGAC-------HEA---------V-T-------YK---N-I---------- 187 (285)
Q Consensus 146 G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~-------~~~---------~-P-------~p---~-~---------- 187 (285)
-.-|.+.+||.++||.|...|++.+=+...... .+. + | +| + +
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~ 256 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYT 256 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 356677889999999999999998766544110 000 1 1 11 0 0
Q ss_pred ---------cc---cC--CCccEEEEEeChHHHHHHHHhcccCCCCCCChhhhhHHHHHHHHHHhhc---CCCCCcEEEE
Q 048698 188 ---------WF---RE--ANSKTRRFVFDAKAIASLRSECKGERVSNPTRIEALSAFILKSAMLASR---STANSRFVLH 250 (285)
Q Consensus 188 ---------~~---~~--~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~St~dal~A~iW~~~~~ar~---~~~~~~~~l~ 250 (285)
+. .. .......+.|+++..++|++.|....++.+|-..+|.|.+-.++.+... ..........
T Consensus 257 ~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~ 336 (519)
T 3fot_A 257 SALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISP 336 (519)
T ss_dssp HHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEE
T ss_pred HHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEE
Confidence 00 01 1223456789999999999999875555789999997777666655321 1123468899
Q ss_pred EEecCcCcCCCCCCcCccccceeecc
Q 048698 251 QAVNLRRLTEPRLSTYTVGNLFLFAS 276 (285)
Q Consensus 251 ~~vd~R~r~~p~lp~~Y~GN~~~~~~ 276 (285)
++||+|+++.++.-.+|+|.+.....
T Consensus 337 ~pvnlR~~l~~~~~~n~~~~~~~~~~ 362 (519)
T 3fot_A 337 TSVDGRRWLREDIASNFYAMCQTAAV 362 (519)
T ss_dssp EEEECGGGBCHHHHTSCCSCCEEEEE
T ss_pred eeeeccccCCCcccccccceeeeeee
Confidence 99999999976555677887776443
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=81.65 E-value=1.3 Score=36.26 Aligned_cols=45 Identities=13% Similarity=0.206 Sum_probs=33.0
Q ss_pred CCCeEEEEEeEEecCc--EEEEeeeccccccHHHHHHHHHHHHHHhc
Q 048698 131 QVPQAAVQLNIFDCGG--IALGLCLSHKIIDGATASGFLRSWAANSR 175 (285)
Q Consensus 131 ~~Pll~vQvt~f~cGG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 175 (285)
..|++.+---.-+.|. +-|++++||.++||.-...|++.+.+...
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 4588864211112233 67899999999999999999999988754
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=80.89 E-value=1.5 Score=36.05 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=31.5
Q ss_pred CCCeEEEEEeEEecCc--EEEEeeeccccccHHHHHHHHHHHHHHh
Q 048698 131 QVPQAAVQLNIFDCGG--IALGLCLSHKIIDGATASGFLRSWAANS 174 (285)
Q Consensus 131 ~~Pll~vQvt~f~cGG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 174 (285)
..|++.+=--.-+.|. +-|++++||.++||.-...|++.+.+..
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 4588754111112233 5789999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=80.33 E-value=1.5 Score=36.01 Aligned_cols=44 Identities=14% Similarity=0.192 Sum_probs=32.5
Q ss_pred CCeEEEEEeEEecCc--EEEEeeeccccccHHHHHHHHHHHHHHhc
Q 048698 132 VPQAAVQLNIFDCGG--IALGLCLSHKIIDGATASGFLRSWAANSR 175 (285)
Q Consensus 132 ~Pll~vQvt~f~cGG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 175 (285)
.|++.+---.-+.|. +-|++++||.+.||.-...|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 587765222222233 67899999999999999999999988754
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=78.23 E-value=2 Score=35.49 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=27.7
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcCC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRGA 177 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~ 177 (285)
+-|+++++|.+.||.-...|++.+.+.....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~p 217 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIEDP 217 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTCT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhCH
Confidence 5589999999999999999999999987653
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=78.15 E-value=1.9 Score=36.01 Aligned_cols=30 Identities=23% Similarity=0.412 Sum_probs=27.1
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRG 176 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 176 (285)
+-|+++++|.++||.-...|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999987654
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=78.07 E-value=2 Score=35.72 Aligned_cols=30 Identities=30% Similarity=0.511 Sum_probs=27.2
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRG 176 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 176 (285)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999988754
No 19
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=77.81 E-value=1.8 Score=36.11 Aligned_cols=30 Identities=20% Similarity=0.470 Sum_probs=27.2
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRG 176 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 176 (285)
+-|+++++|.++||.-...|++.+.+....
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999987653
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=77.04 E-value=2.2 Score=36.18 Aligned_cols=30 Identities=33% Similarity=0.585 Sum_probs=26.8
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRG 176 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 176 (285)
+-|+++++|.++||.-...|++.+.+....
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999987653
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=72.96 E-value=3.2 Score=34.99 Aligned_cols=31 Identities=35% Similarity=0.574 Sum_probs=27.8
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcCC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRGA 177 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~ 177 (285)
+-|+++++|.+.||.-...|++.+.+.....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P 240 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEKI 240 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhCh
Confidence 4589999999999999999999999987653
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=71.82 E-value=3.5 Score=34.58 Aligned_cols=30 Identities=20% Similarity=0.423 Sum_probs=27.1
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRG 176 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 176 (285)
+-|+++++|.+.||.-...|++.|.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999988764
No 23
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=50.31 E-value=3.3 Score=37.65 Aligned_cols=30 Identities=37% Similarity=0.478 Sum_probs=0.0
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRG 176 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 176 (285)
+-|+++++|.++||.-...|++.+.+....
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 358999999999999999999999887654
No 24
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=48.62 E-value=10 Score=19.06 Aligned_cols=18 Identities=17% Similarity=0.039 Sum_probs=14.9
Q ss_pred CCChhhhhHHHHHHHHHH
Q 048698 220 NPTRIEALSAFILKSAML 237 (285)
Q Consensus 220 ~~St~dal~A~iW~~~~~ 237 (285)
-.++.|-|+-++|++++.
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 467789999999999863
No 25
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=31.70 E-value=39 Score=34.60 Aligned_cols=30 Identities=33% Similarity=0.453 Sum_probs=26.4
Q ss_pred EEEEeeeccccccHHHHHHHHHHHHHHhcC
Q 048698 147 IALGLCLSHKIIDGATASGFLRSWAANSRG 176 (285)
Q Consensus 147 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 176 (285)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 678999999999999999999988776653
No 26
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=27.11 E-value=97 Score=18.67 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=27.9
Q ss_pred EEEEEeChHHHHHHHHhcccCCCCCCChhhhhHHHHHHHHHHhh
Q 048698 196 TRRFVFDAKAIASLRSECKGERVSNPTRIEALSAFILKSAMLAS 239 (285)
Q Consensus 196 ~~~f~~~~~~l~~Lk~~~~~~~~~~~St~dal~A~iW~~~~~ar 239 (285)
...|+|++++-+.|++.+.++ .|.+..+|=|.+.++.
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEE-------EESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHT-------TSCTTHHHHHHHHHHH
T ss_pred eEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 457999999999999998864 3445566777777664
No 27
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=24.32 E-value=83 Score=20.18 Aligned_cols=25 Identities=20% Similarity=0.321 Sum_probs=21.8
Q ss_pred chHHHHHHHHHHhhccccCCCceec
Q 048698 55 QISTQLKESLSKTLDHLYPFAGRVR 79 (285)
Q Consensus 55 ~~~~~Lk~sL~~~L~~~p~laGrl~ 79 (285)
++.+.++++|...+.+-..+||.+.
T Consensus 10 ddleafekalkemirqarkfagtvt 34 (85)
T 2kl8_A 10 DDLEAFEKALKEMIRQARKFAGTVT 34 (85)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCEEE
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEE
Confidence 3578899999999999999999986
No 28
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=23.00 E-value=95 Score=22.55 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHhhccccCCCceec
Q 048698 56 ISTQLKESLSKTLDHLYPFAGRVR 79 (285)
Q Consensus 56 ~~~~Lk~sL~~~L~~~p~laGrl~ 79 (285)
+.+.|+++|...+.+-..+||.+.
T Consensus 93 dlea~ekalkemirqarkfagtvt 116 (170)
T 4hhu_A 93 DLEALEKALKEMIRQARKFAGTVT 116 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEE
Confidence 488999999999999999999885
No 29
>1clv_I Protein (alpha-amylase inhibitor); insect alpha-amylase inhibitor, amaranthus hypochondriacus, yellow MEAL WORM, knottin, hydrolase; 2.00A {Tenebrio molitor} SCOP: g.3.2.1 PDB: 1htx_A 1qfd_A
Probab=22.09 E-value=24 Score=18.53 Aligned_cols=8 Identities=25% Similarity=0.256 Sum_probs=6.2
Q ss_pred CcCccccc
Q 048698 264 STYTVGNL 271 (285)
Q Consensus 264 p~~Y~GN~ 271 (285)
.++|+||+
T Consensus 24 tsdyygnc 31 (32)
T 1clv_I 24 TSDYYGNC 31 (32)
T ss_dssp SCSSSEEB
T ss_pred cccccccC
Confidence 46788986
Done!