BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048703
(361 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QHR|B Chain B, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|D Chain D, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|B Chain B, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|D Chain D, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 261
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 7 YQEDIHTYLREMEVKCKPKVGYMKR-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 65
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TYS+++VL+ME
Sbjct: 66 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEH 125
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 126 LVLKVLAFDLAAPTVNQFLTQYF 148
>pdb|4I3Z|B Chain B, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|D Chain D, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 257
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 4 YQEDIHTYLREMEVKCKPKVGYMKR-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 62
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TYS+++VL+ME
Sbjct: 63 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEH 122
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 123 LVLKVLAFDLAAPTVNQFLTQYF 145
>pdb|4II5|B Chain B, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|D Chain D, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 258
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 4 YQEDIHTYLREMEVKCKPKVGYMKR-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 62
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TYS+++VL+ME
Sbjct: 63 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEH 122
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 123 LVLKVLAFDLAAPTVNQFLTQYF 145
>pdb|3DOG|B Chain B, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|D Chain D, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 264
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLAFDLAAPTINQFLTQYF 149
>pdb|3DDQ|B Chain B, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|D Chain D, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
Length = 269
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLAFDLAAPTINQFLTQYF 149
>pdb|3DDP|B Chain B, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|D Chain D, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
Length = 268
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLAFDLAAPTINQFLTQYF 149
>pdb|3BHT|B Chain B, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|D Chain D, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|B Chain B, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|D Chain D, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|B Chain B, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|D Chain D, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|B Chain B, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|D Chain D, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|B Chain B, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|D Chain D, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
Length = 262
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLAFDLAAPTINQFLTQYF 149
>pdb|4BCQ|D Chain D, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 262
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLTFDLAAPTVNQFLTQYF 149
>pdb|2G9X|B Chain B, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|D Chain D, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
Length = 262
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLAFDLAAPTINQFLTQYF 149
>pdb|1VIN|A Chain A, Bovine Cyclin A3
Length = 268
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLAFDLAAPTINQFLTQYF 149
>pdb|4BCQ|B Chain B, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 262
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLTFDLAAPTVNQFLTQYF 149
>pdb|1VYW|B Chain B, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|D Chain D, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|B Chain B, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|D Chain D, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|B Chain B, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|D Chain D, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|B Chain B, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|D Chain D, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|B Chain B, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|D Chain D, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|B Chain B, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|D Chain D, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|B Chain B, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|D Chain D, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|B Chain B, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|D Chain D, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 265
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 11 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 69
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 70 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 129
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 130 LVLKVLTFDLAAPTVNQFLTQYF 152
>pdb|4BCO|B Chain B, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|D Chain D, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 262
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 8 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 66
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 67 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 126
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 127 LVLKVLTFDLAAPTVNQFLTQYF 149
>pdb|2X1N|B Chain B, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|D Chain D, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
Length = 261
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 7 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 65
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 66 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 125
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 126 LVLKVLTFDLAAPTVNQFLTQYF 148
>pdb|1FIN|B Chain B, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|D Chain D, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1JSU|B Chain B, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FVV|B Chain B, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|D Chain D, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1OKV|B Chain B, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|D Chain D, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|B Chain B, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|D Chain D, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|B Chain B, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|D Chain D, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|B Chain B, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|D Chain D, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1URC|B Chain B, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|D Chain D, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|2C5O|B Chain B, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|D Chain D, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2CCH|B Chain B, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|D Chain D, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2I40|B Chain B, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|D Chain D, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|3EID|B Chain B, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|D Chain D, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|B Chain B, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|D Chain D, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|B Chain B, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|D Chain D, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2WEV|B Chain B, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|D Chain D, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|B Chain B, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|D Chain D, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|B Chain B, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|D Chain D, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
Length = 260
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 6 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 64
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 65 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 124
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 125 LVLKVLTFDLAAPTVNQFLTQYF 147
>pdb|3F5X|B Chain B, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|D Chain D, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
Length = 256
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 2 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 60
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 61 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 120
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 121 LVLKVLTFDLAAPTVNQFLTQYF 143
>pdb|1QMZ|B Chain B, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|D Chain D, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1H24|B Chain B, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|D Chain D, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|B Chain B, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|D Chain D, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|B Chain B, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|D Chain D, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|B Chain B, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|D Chain D, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|B Chain B, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|D Chain D, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2C5N|B Chain B, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|D Chain D, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|B Chain B, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|D Chain D, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|B Chain B, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|D Chain D, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2UUE|B Chain B, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|D Chain D, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|B Chain B, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|D Chain D, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2WMA|B Chain B, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|D Chain D, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|B Chain B, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|D Chain D, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 259
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 5 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 63
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 64 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 123
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 124 LVLKVLTFDLAAPTVNQFLTQYF 146
>pdb|1JST|B Chain B, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|D Chain D, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1GY3|B Chain B, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|D Chain D, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1H1P|B Chain B, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|D Chain D, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|B Chain B, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|D Chain D, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|B Chain B, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|D Chain D, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|B Chain B, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|D Chain D, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1P5E|B Chain B, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|D Chain D, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1PKD|B Chain B, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|D Chain D, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|2C6T|B Chain B, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|D Chain D, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|B Chain B, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|D Chain D, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CCI|B Chain B, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|D Chain D, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2UZB|B Chain B, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|D Chain D, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|B Chain B, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|D Chain D, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|B Chain B, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|D Chain D, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|B Chain B, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|D Chain D, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4EOI|B Chain B, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|D Chain D, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOJ|B Chain B, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|D Chain D, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOK|B Chain B, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|D Chain D, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|B Chain B, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|D Chain D, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOM|B Chain B, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|D Chain D, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EON|B Chain B, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|D Chain D, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOO|B Chain B, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|D Chain D, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOP|B Chain B, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|D Chain D, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOQ|B Chain B, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|D Chain D, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOR|B Chain B, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|D Chain D, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOS|B Chain B, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|D Chain D, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 258
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 4 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 62
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 63 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 122
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 123 LVLKVLTFDLAAPTVNQFLTQYF 145
>pdb|1E9H|B Chain B, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|D Chain D, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
Length = 261
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 4 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 62
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 63 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 122
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 123 LVLKVLTFDLAAPTVNQFLTQYF 145
>pdb|1OGU|B Chain B, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|D Chain D, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|B Chain B, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|D Chain D, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|B Chain B, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|D Chain D, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|B Chain B, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|D Chain D, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|2IW6|B Chain B, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|D Chain D, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW8|B Chain B, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|D Chain D, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW9|B Chain B, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|D Chain D, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 260
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 219 YAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTV 278
Y DI++ L+ E+ +P +M+ Q DIT +MR ILVDWLVEV EEYKL +TL++ V
Sbjct: 6 YHEDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 64
Query: 279 YLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMES 338
ID FL + R +LQL+G ML+ASK+EEI P EF +ITD+TY++++VL+ME
Sbjct: 65 NYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEH 124
Query: 339 QVLKCLGFQLFVPTTKTFL-RYF 360
VLK L F L PT FL +YF
Sbjct: 125 LVLKVLTFDLAAPTVNQFLTQYF 147
>pdb|2B9R|A Chain A, Crystal Structure Of Human Cyclin B1
pdb|2B9R|B Chain B, Crystal Structure Of Human Cyclin B1
Length = 269
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 2/144 (1%)
Query: 215 LCSLYAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTL 274
L S Y DIY+ L+ E + P ++ + R++T MR IL+DWLV+V +++L+ +T+
Sbjct: 2 LSSEYVKDIYAYLRQLEAAQAVRPKYL--LGREVTGNMRAILIDWLVQVQMKFRLLQETM 59
Query: 275 YMTVYLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVL 334
YMTV +ID F+ N + ++ LQL+G+T M IASKYEE+ P +F F+TDNTY++ ++
Sbjct: 60 YMTVSIIDRFMQNNSVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIR 119
Query: 335 KMESQVLKCLGFQLFVPTTKTFLR 358
+ME ++L+ L F L P FLR
Sbjct: 120 QMEMKILRALNFGLGRPLPLHFLR 143
>pdb|2JGZ|B Chain B, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 260
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 216 CSLYAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLY 275
CS Y DIY+ L+ E + P ++ + R++T MR IL+DWLV+V +++L+ +T+Y
Sbjct: 1 CSEYVKDIYAYLRQLEEEQAVRPKYL--LGREVTGNMRAILIDWLVQVQMKFRLLQETMY 58
Query: 276 MTVYLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLK 335
MTV +ID F+ N + ++ LQL+G+T M IASKYEE+ P +F F+TDNTY++ ++ +
Sbjct: 59 MTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQ 118
Query: 336 MESQVLKCLGFQLFVPTTKTFLR 358
ME ++L+ L F L P FLR
Sbjct: 119 MEMKILRALNFGLGRPLPLHFLR 141
>pdb|1W98|B Chain B, The Structural Basis Of Cdk2 Activation By Cyclin E
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 239 NFMETVQRDITQA-MRGILVDWLVEVSEEYKLVPDTLYMTVYLIDWFLC-QNYIERQRLQ 296
+F+E Q + Q MR IL+DWL+EV E YKL +T Y+ D ++ Q + + LQ
Sbjct: 37 HFLE--QHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQ 94
Query: 297 LLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMESQVLKCLGFQLFVPTTKTF 356
L+GI+ + IA+K EEI P+ +F ++TD S +E+L ME ++K L ++L T ++
Sbjct: 95 LIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSW 154
Query: 357 LRYF 360
L +
Sbjct: 155 LNVY 158
>pdb|2W9Z|A Chain A, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 257
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%)
Query: 236 PFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTVYLIDWFLCQNYIERQRL 295
P ++ + VQ+++ +MR I+ W++EV EE K + + + +D FL +++ RL
Sbjct: 26 PSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRL 85
Query: 296 QLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMESQVLKCLGFQLFVPTTKT 355
QLLG TCM +ASK +E AE+ C TDN+ EE+L+ME ++ L + L T
Sbjct: 86 QLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHD 145
Query: 356 FLRYF 360
F+ +F
Sbjct: 146 FIEHF 150
>pdb|2W96|A Chain A, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W99|A Chain A, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9F|A Chain A, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%)
Query: 236 PFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTVYLIDWFLCQNYIERQRL 295
P ++ + VQ+++ +MR I+ W++EV EE K + + + +D FL +++ RL
Sbjct: 40 PSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRL 99
Query: 296 QLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMESQVLKCLGFQLFVPTTKT 355
QLLG TCM +ASK +E AE+ C TDN+ EE+L+ME ++ L + L T
Sbjct: 100 QLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHD 159
Query: 356 FLRYF 360
F+ +F
Sbjct: 160 FIEHF 164
>pdb|3G33|B Chain B, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|D Chain D, Crystal Structure Of Cdk4CYCLIN D3
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 236 PFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTVYLIDWFLCQNYIERQRL 295
P ++ + VQR+I MR +L W++EV EE + + + + +D +L + +L
Sbjct: 54 PRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQL 113
Query: 296 QLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMESQVLKCLGFQLFVPTTKT 355
QLLG CML+ASK E E+ C TD+ S ++ E VL L + L
Sbjct: 114 QLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHD 173
Query: 356 FLRYF 360
FL +
Sbjct: 174 FLAFI 178
>pdb|1G3N|C Chain C, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|G Chain G, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 257
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 212 DPQLCSLYAADIYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVP 271
DP LC I+ N+ E + T Q+ +T MR +L W+ V +EY L P
Sbjct: 13 DPTLCE---DRIFYNILEIEPRFLTSDSVFGTFQQSLTSHMRKLLGTWMFSVCQEYNLEP 69
Query: 272 DTLYMTVYLIDWFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSRE 331
+ + + + L+D L + ++ Q G C+L+ASK + C+ +++SR+
Sbjct: 70 NVVALALNLLDRLLLIKQVSKEHFQKTGSACLLVASKLRSLTPISTSSLCYAAADSFSRQ 129
Query: 332 EVLKMESQVLKCLGFQ 347
E++ E ++L+ L ++
Sbjct: 130 ELIDQEKELLEKLAWR 145
>pdb|1JOW|A Chain A, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|A Chain A, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|A Chain A, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|A Chain A, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 254
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 223 IYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTVYLID 282
+ +NL++ EL F + E +Q ++T R IL+ W+ + E ++L ++V ++D
Sbjct: 23 VLNNLKLRELLLPKFTSLWE-IQTEVTVDNRTILLTWMHLLCESFELDKSVFPLSVSILD 81
Query: 283 WFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMESQVLK 342
+LC+ ++ LQ +G C+LI SK + + +++ + ++ E++ E +L+
Sbjct: 82 RYLCKKQGTKKTLQKIGAACVLIGSKIRTVKPMTVSKLTYLSCDCFTNLELINQEKDILE 141
Query: 343 CLGF 346
L +
Sbjct: 142 ALKW 145
>pdb|1BU2|A Chain A, X-Ray Structure Of A Viral Cyclin From Herpesvirus Saimiri
Length = 229
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 223 IYSNLQVAELNRRPFPNFMETVQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTVYLID 282
+ +NL++ EL F + E +Q ++T R IL+ W+ + E ++L ++V ++D
Sbjct: 2 VLNNLKLRELLLPKFTSLWE-IQTEVTVDNRTILLTWMHLLCESFELDKSVFPLSVSILD 60
Query: 283 WFLCQNYIERQRLQLLGITCMLIASKYEEICAPRAEEFCFITDNTYSREEVLKMESQVLK 342
+LC+ ++ LQ +G C+LI SK + + +++ + ++ E++ E +L+
Sbjct: 61 RYLCKKQGTKKTLQKIGAACVLIGSKIRTVKPMTVSKLTYLSCDCFTNLELINQEKDILE 120
Query: 343 CLGF 346
L +
Sbjct: 121 ALKW 124
>pdb|1F5Q|B Chain B, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|D Chain D, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
Length = 252
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/103 (19%), Positives = 43/103 (41%)
Query: 244 VQRDITQAMRGILVDWLVEVSEEYKLVPDTLYMTVYLIDWFLCQNYIERQRLQLLGITCM 303
V + T R +L W+ V ++ + + + V L+D I+R+ Q +
Sbjct: 40 VDQHFTSQYRKVLTTWMFCVCKDLRQDNNVFPLAVALLDELFLSTRIDRENYQSTAAVAL 99
Query: 304 LIASKYEEICAPRAEEFCFITDNTYSREEVLKMESQVLKCLGF 346
IA K +A + ++ + +++L +E + L L +
Sbjct: 100 HIAGKVRAYMPIKATQLAYLCGGATTADKLLTLEVKSLDTLSW 142
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,509,650
Number of Sequences: 62578
Number of extensions: 358362
Number of successful extensions: 868
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 837
Number of HSP's gapped (non-prelim): 33
length of query: 361
length of database: 14,973,337
effective HSP length: 100
effective length of query: 261
effective length of database: 8,715,537
effective search space: 2274755157
effective search space used: 2274755157
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)