Query 048705
Match_columns 487
No_of_seqs 152 out of 1071
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 21:25:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ks8_A Endo-B-1,4-glucanase; c 100.0 1E-113 4E-118 902.3 30.1 428 4-484 2-431 (433)
2 2xfg_A Endoglucanase 1; hydrol 100.0 5E-113 2E-117 902.1 33.4 436 2-483 21-461 (466)
3 1ia6_A Cellulase CEL9M; cellul 100.0 6E-113 2E-117 898.1 33.3 423 3-483 2-428 (441)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 5E-112 2E-116 920.5 32.8 437 3-483 2-442 (605)
5 1g87_A Endocellulase 9G; endog 100.0 8E-110 3E-114 904.0 34.4 436 3-484 2-439 (614)
6 2yik_A Endoglucanase; hydrolas 100.0 1E-110 5E-115 910.4 24.9 429 3-483 36-514 (611)
7 1clc_A Endoglucanase CELD; EC: 100.0 6.7E-99 2E-103 823.2 30.3 412 2-486 124-566 (639)
8 3gzk_A Cellulase; fold from GH 100.0 1.6E-99 6E-104 813.1 24.9 410 2-484 83-534 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 1.1E-97 4E-102 810.9 29.5 445 2-484 96-607 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 1.1E-67 3.8E-72 564.9 21.6 392 2-479 91-562 (586)
11 3gt5_A N-acetylglucosamine 2-e 96.7 0.26 8.8E-06 50.3 22.9 146 61-250 48-203 (402)
12 2gz6_A N-acetyl-D-glucosamine 96.5 0.33 1.1E-05 48.8 21.7 149 61-250 49-202 (388)
13 3k7x_A LIN0763 protein; Q92DQ0 96.0 0.24 8.3E-06 49.7 17.4 71 153-250 49-122 (349)
14 2gz6_A N-acetyl-D-glucosamine 95.8 0.58 2E-05 47.0 19.6 118 100-250 21-145 (388)
15 3k7x_A LIN0763 protein; Q92DQ0 95.2 0.26 9E-06 49.4 14.2 123 88-250 109-243 (349)
16 3gt5_A N-acetylglucosamine 2-e 93.7 0.15 5.3E-06 52.0 8.5 128 92-250 11-142 (402)
17 1nc5_A Hypothetical protein YT 93.2 1.3 4.3E-05 44.7 14.2 64 176-250 107-173 (373)
18 3pmm_A Putative cytoplasmic pr 93.0 7.5 0.00026 39.2 19.6 113 90-250 25-140 (382)
19 3k11_A Putative glycosyl hydro 92.9 0.79 2.7E-05 47.5 12.3 97 67-191 268-364 (445)
20 1fp3_A N-acyl-D-glucosamine 2- 91.7 1.1 3.7E-05 45.4 11.5 129 92-250 15-152 (402)
21 2zzr_A Unsaturated glucuronyl 91.0 0.81 2.8E-05 46.7 9.6 128 89-250 132-276 (397)
22 1nc5_A Hypothetical protein YT 90.4 7.4 0.00025 38.9 16.1 74 153-252 44-119 (373)
23 2ahf_A Unsaturated glucuronyl 89.6 1.2 4E-05 45.2 9.3 128 90-250 107-251 (377)
24 3pmm_A Putative cytoplasmic pr 89.3 5.1 0.00017 40.5 13.9 29 222-250 69-98 (382)
25 1fp3_A N-acyl-D-glucosamine 2- 86.9 2.2 7.6E-05 43.0 9.5 83 153-249 250-343 (402)
26 3k11_A Putative glycosyl hydro 85.2 15 0.00051 37.9 14.7 64 176-249 165-233 (445)
27 2zbl_A Putative isomerase; N-a 83.1 3.1 0.00011 42.4 8.6 124 92-249 13-139 (421)
28 2p0v_A Hypothetical protein BT 78.3 22 0.00074 37.0 12.7 123 61-191 175-319 (489)
29 3e6u_A LANC-like protein 1; al 78.0 12 0.0004 38.1 10.8 117 88-249 248-364 (411)
30 1gxm_A Pectate lyase; mechanis 73.6 24 0.00081 34.8 11.0 84 90-192 93-182 (332)
31 2zbl_A Putative isomerase; N-a 70.1 13 0.00043 37.8 8.7 150 61-250 47-202 (421)
32 2ahf_A Unsaturated glucuronyl 65.1 56 0.0019 32.7 12.1 23 228-250 96-118 (377)
33 2zzr_A Unsaturated glucuronyl 59.5 80 0.0028 31.8 12.1 25 227-251 121-145 (397)
34 1r76_A Pectate lyase; A-helica 59.0 42 0.0014 34.0 9.8 86 89-192 170-258 (408)
35 2kmg_A KLCA; ARDB, spectroscop 42.8 16 0.00056 31.5 3.2 87 101-193 40-133 (142)
36 3p2c_A Putative glycosyl hydro 39.9 2.9E+02 0.0099 28.3 12.5 122 62-191 159-301 (463)
37 2v8i_A Pectate lyase; periplas 33.5 30 0.001 35.6 3.9 25 225-249 431-455 (543)
38 2wj9_A ARDB, intergenic-region 32.4 82 0.0028 28.1 6.1 85 101-193 79-172 (181)
39 2ri9_A Mannosyl-oligosaccharid 27.8 94 0.0032 32.1 6.6 31 221-251 371-401 (475)
40 1w6k_A Lanosterol synthase; cy 27.6 5.3E+02 0.018 28.0 13.0 88 94-192 481-571 (732)
41 3e6u_A LANC-like protein 1; al 27.2 2.1E+02 0.0072 28.6 9.1 66 169-250 40-105 (411)
42 1hcu_A Alpha-1,2-mannosidase; 21.2 1.4E+02 0.0047 31.1 6.4 30 222-251 391-420 (503)
No 1
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=1.1e-113 Score=902.34 Aligned_cols=428 Identities=40% Similarity=0.729 Sum_probs=384.9
Q ss_pred chhHHHHHHHHHhhhHhhcCCCCCCCCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHHhcc
Q 048705 4 SRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGS 83 (487)
Q Consensus 4 ~~~Y~~~l~~sl~fy~~QRsG~~p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e~~~ 83 (487)
..+|.++|++||+||++||||++|++++++||++||++||++.++||+|||||||||+||++|+++|+++|+|+++||++
T Consensus 2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~ 81 (433)
T 1ks8_A 2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA 81 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC--chHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHH
Q 048705 84 HMG--PEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAA 161 (487)
Q Consensus 84 ~~~--~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~ 161 (487)
.|+ +++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.|+.++|||++++++|||||+
T Consensus 82 ~~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~ 161 (433)
T 1ks8_A 82 GYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAA 161 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHH
Confidence 997 889999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred hhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchhH
Q 048705 162 SSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSY 241 (487)
Q Consensus 162 as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y 241 (487)
||||||++||+||++||++||++|+||++||+.|.+.++ ..++||++ ++| .||++|||+|||++||+++|
T Consensus 162 as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~-~~~~~Y~s-s~~--------~DE~~WAAa~Ly~aTgd~~Y 231 (433)
T 1ks8_A 162 ASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSIT-DARNFYAS-ADY--------RDELVWAAAWLYRATNDNTY 231 (433)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSG-GGGGTSCC-CCT--------HHHHHHHHHHHHHHHCCHHH
T ss_pred HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC-cCCCCCCC-CCc--------ccHHHHHHHHHHHHhCCHHH
Confidence 999999999999999999999999999999999876543 24688888 777 99999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCchhhhHHHHHHHHHHHHhCCCCCCCcccc
Q 048705 242 MKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVTY 321 (487)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~ 321 (487)
+++++++...++. ......|+|+++.++++++|++. .+. +.+++.++.++|.++. .+.+
T Consensus 232 l~~~~~~~~~~~~------------~~~~~~~~Wd~~~~g~~~lla~~-~~~---~~~~~~~~~~~~~~~~-----~~~~ 290 (433)
T 1ks8_A 232 LNTAESLYDEFGL------------QNWGGGLNWDSKVSGVQVLLAKL-TNK---QAYKDTVQSYVNYLIN-----NQQK 290 (433)
T ss_dssp HHHHHHHHHHTTG------------GGSCCCCCSSCCHHHHHHHHHHH-HCC---HHHHHHHHHHHHHHHH-----TSCB
T ss_pred HHHHHHHHHhcCc------------CcCcCCcCccchhhHHHHHHhhc-cCh---HHHHHHHHHHHHHHHh-----cCCc
Confidence 9999987754430 12346899999999999888762 332 3455555555555432 3456
Q ss_pred cCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCCCC
Q 048705 322 SSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFP 401 (487)
Q Consensus 322 t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p 401 (487)
||+|+.|...|+++++++|.+|+++++.++ .+++.+|+++|++|||||||+| ++|||||||+|+|
T Consensus 291 tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~-------------~~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p 355 (433)
T 1ks8_A 291 TPKGLLYIDMWGTLRHAANAAFIMLEAAEL-------------GLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPP 355 (433)
T ss_dssp CTTSCBCCCSTTHHHHHHHHHHHHHHHHHT-------------TSSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCC
T ss_pred CCCCceeecCCchhHHHHHHHHHHHHHHhc-------------CCCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCC
Confidence 899999988899999999999999999763 1357899999999999999997 7899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHHHHHHh
Q 048705 402 RRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYF 481 (487)
Q Consensus 402 ~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~~la~l 481 (487)
++||||+++||.. |..|..| +++++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|
T Consensus 356 ~~pHHR~s~~~~~-----~~~c~~~--~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l 428 (433)
T 1ks8_A 356 TRPHHRSSSCPPA-----PATCDWN--TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAAL 428 (433)
T ss_dssp SCCSCHHHHCCCT-----TSCCSHH--HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHH
T ss_pred CCCcchhhcCCCc-----ccccccc--ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHH
Confidence 9999999999874 3589766 57889999999999999999999999999999999999999999999999999
Q ss_pred hcC
Q 048705 482 KAY 484 (487)
Q Consensus 482 ~~~ 484 (487)
...
T Consensus 429 ~~~ 431 (433)
T 1ks8_A 429 VAL 431 (433)
T ss_dssp HHT
T ss_pred Hhc
Confidence 865
No 2
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=4.9e-113 Score=902.08 Aligned_cols=436 Identities=36% Similarity=0.608 Sum_probs=383.8
Q ss_pred CCchhHHHHHHHHHhhhHhhcCCCC-CCCCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHH
Q 048705 2 VASRDYGDALSKCVLFFEGQRSGKL-PSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILE 80 (487)
Q Consensus 2 i~~~~Y~~~l~~sl~fy~~QRsG~~-p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e 80 (487)
+++++|.++|++||+||++||||++ |+.+++.||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+++|
T Consensus 21 ~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~e 100 (466)
T 2xfg_A 21 TGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVYE 100 (466)
T ss_dssp CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHHHH
Confidence 4578999999999999999999997 999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCC--chHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHH
Q 048705 81 FGSHMG--PEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAA 158 (487)
Q Consensus 81 ~~~~~~--~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAa 158 (487)
|++.|+ +++||||||||||+|||||||+++|.||+|||++..||.+|++||+|+.+|++|.++.++|+|++++++|||
T Consensus 101 ~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAA 180 (466)
T 2xfg_A 101 YEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAA 180 (466)
T ss_dssp CHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHH
T ss_pred hHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHHH
Confidence 999997 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCc
Q 048705 159 LAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNR 238 (487)
Q Consensus 159 lA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~ 238 (487)
||+||||||++||+||++||++||++|+||++||+.|... ..++||+++++| .||++|||+|||++||+
T Consensus 181 lAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~---~~~~~Y~s~s~~--------~DEl~WAAawLy~ATgd 249 (466)
T 2xfg_A 181 LAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYT---AANGFYNSWSGF--------YDELSWAAVWLYLATND 249 (466)
T ss_dssp HHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCC---TTTTTSCCSSCS--------HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCC---ccccccCCCCCC--------chHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999988432 247899887777 99999999999999999
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCch-h-hhHHHHHHHHHHHHhCCCCCC
Q 048705 239 QSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTS-K-SDPFVRHADKFICSVLPESPT 316 (487)
Q Consensus 239 ~~Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~~-~-~~~~~~~ad~~~~~~~~~~~~ 316 (487)
++|+++++.+...++. ..+.. .......|+|+++..+++++|++. .+.. . ++.++..++.++| +.+.
T Consensus 250 ~~Yl~~a~~~~~~~~~--~~~~~----~~~~~~~~~Wd~~~~g~~~lla~~-~~~~~~~~~~~~~~~~~~~~----~~~~ 318 (466)
T 2xfg_A 250 SSYLDKAESYSDKWGY--EPQTN----IPKYKWAQCWDDVTYGTYLLLARI-KNDNGKYKEAIERHLDWWTT----GYNG 318 (466)
T ss_dssp HHHHHHHHHTTTTSCB--STTSS----SBCCSSCCBTTBCHHHHHHHHHHH-HCSSCHHHHHHHHHHHHHTT----CBTT
T ss_pred HHHHHHHHHHHHHhcc--ccccc----cccccCcCCcchhHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHh----ccCC
Confidence 9999999987654330 00000 001245799999999999988863 4433 3 4555555555443 2232
Q ss_pred CcccccCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeee
Q 048705 317 KLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGY 396 (487)
Q Consensus 317 ~~~~~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~ 396 (487)
.++++||+|+.|+..|++++|++|.+||+++|++++ .|+ ..++++|+++|++|||||||+| ++||||||
T Consensus 319 ~~~~~tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~-------~~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~ 387 (466)
T 2xfg_A 319 ERITYTPKGLAWLDQWGSLRYATTTAFLACVYSDWE-------NGD--KEKAKTYLEFARSQADYALGST--GRSFVVGF 387 (466)
T ss_dssp BCCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHTCT-------TSC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTS
T ss_pred CccccCCccccccCCCCchHHHHHHHHHHHHHHHhc-------CCC--cccHHHHHHHHHHhHHhhcCCC--CcceEecc
Confidence 478899999999999999999999999999998753 232 2347899999999999999999 99999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHH
Q 048705 397 GRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVG 476 (487)
Q Consensus 397 G~~~p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~ 476 (487)
|+|+|++||||+++||.. .+.+.+.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||+
T Consensus 388 G~~~p~~pHHR~ss~~~~-------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~ 454 (466)
T 2xfg_A 388 GENPPKRPHHRTAHGSWA-------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVG 454 (466)
T ss_dssp SSSCCSCCSCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHH
T ss_pred CCCCCCCCcCchhccCcc-------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHH
Confidence 999999999999998753 1245688999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 048705 477 VLSYFKA 483 (487)
Q Consensus 477 ~la~l~~ 483 (487)
+||+|..
T Consensus 455 ~la~l~~ 461 (466)
T 2xfg_A 455 LLAKMYK 461 (466)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999975
No 3
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=5.8e-113 Score=898.06 Aligned_cols=423 Identities=31% Similarity=0.535 Sum_probs=373.7
Q ss_pred CchhHHHHHHHHHhhhHhhcCCCCCC-CCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHHh
Q 048705 3 ASRDYGDALSKCVLFFEGQRSGKLPS-TQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEF 81 (487)
Q Consensus 3 ~~~~Y~~~l~~sl~fy~~QRsG~~p~-~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e~ 81 (487)
++++|.++|++||+||++||||++|+ .++++||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+++||
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~ 81 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF 81 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence 57899999999999999999999887 89999999999999999999999999999999999999999999999999999
Q ss_pred cccCC--chHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCcee-eecCCCCCCcHHHHHHHHH
Q 048705 82 GSHMG--PEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTS-YVVNTTNPGSEVSAEIAAA 158 (487)
Q Consensus 82 ~~~~~--~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~-~~~~~~~pgs~~~~~~aAa 158 (487)
++.|. +++||||||||||+|||||||+++|+||+|||++..||.+|++||+|+.+|++ |.++.++|+|++++++|||
T Consensus 82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAa 161 (441)
T 1ia6_A 82 KESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAA 161 (441)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHH
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHH
Confidence 99886 78999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCc
Q 048705 159 LAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNR 238 (487)
Q Consensus 159 lA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~ 238 (487)
||+||||||++||+||++||++||++|+||++||+.+. .++||++ ++| .||++|||+|||++||+
T Consensus 162 lAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~------~~~~Y~s-s~~--------~DE~~WAAa~Ly~aTgd 226 (441)
T 1ia6_A 162 LTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN------GQSFYQA-TSF--------GDDLAWAATWLYTATND 226 (441)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC------CTTTSCC-CCS--------HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC------CCCCCCC-CCc--------hhHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999998643 3678888 777 99999999999999999
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCchhhhHHHHHHHHHHHHhCCCCCCCc
Q 048705 239 QSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKL 318 (487)
Q Consensus 239 ~~Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~ 318 (487)
++|+++++++..... .++... ......|+|+++..|++++|++. .+.. .+++.++.+++.++ ..
T Consensus 227 ~~Yl~~a~~~~~~~~---~~~~~~----~~~~~~~~Wd~~~~g~~~lla~~-~~~~---~~~~~~~~~~~~~~-----~~ 290 (441)
T 1ia6_A 227 STYITDAEQFITLGN---TMNENK----MQDKWTMCWDDMYVPAALRLAQI-TGKQ---IYKDAIEFNFNYWK-----TQ 290 (441)
T ss_dssp THHHHHHHHHTTC---------CG----GGCSSCSSSSCCHHHHHHHHHHH-HCCH---HHHHHHHHHHHHHH-----HT
T ss_pred HHHHHHHHHHHhhhh---hccccc----ccCCCcCCccchHHHHHHHHHhc-cCcH---HHHHHHHHHHHHHH-----hh
Confidence 999999988653210 010000 01245799999999999888763 3332 33444444443332 25
Q ss_pred ccccCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCC
Q 048705 319 VTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGR 398 (487)
Q Consensus 319 ~~~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~ 398 (487)
+++||+|+.|+..|++++|++|++||+++|++++ ++++|+++|++|||||||+||+++|||||||.
T Consensus 291 ~~~tp~Gl~~~~~WGs~~~~~~~a~l~~~~~~~~--------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~ 356 (441)
T 1ia6_A 291 VTTTPGGLKWLSNWGVLRYAAAESMVMLVYCKQN--------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGS 356 (441)
T ss_dssp SCBCTTSCBCCCSTTHHHHHHHHHHHHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSS
T ss_pred cccCCCCceecCCcchHHHHHHHHHHHHHHHhhc--------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCC
Confidence 6789999999899999999999999999998742 36799999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHHHH
Q 048705 399 KFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVL 478 (487)
Q Consensus 399 ~~p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~~l 478 (487)
|+|++||||+++|+.. .++..+.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++|
T Consensus 357 ~~p~~pHHR~s~~~~~-------------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~l 423 (441)
T 1ia6_A 357 NWCIHPHHRAANGYTY-------------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVL 423 (441)
T ss_dssp SCCSCCBCHHHHCCCC-------------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHH
T ss_pred CCCCCCcChhhccCCc-------------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHH
Confidence 9999999999998752 135568899999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 048705 479 SYFKA 483 (487)
Q Consensus 479 a~l~~ 483 (487)
|+|..
T Consensus 424 a~l~~ 428 (441)
T 1ia6_A 424 AGAIK 428 (441)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=5.4e-112 Score=920.45 Aligned_cols=437 Identities=39% Similarity=0.668 Sum_probs=390.5
Q ss_pred CchhHHHHHHHHHhhhHhhcCCCCCCCCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHHhc
Q 048705 3 ASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFG 82 (487)
Q Consensus 3 ~~~~Y~~~l~~sl~fy~~QRsG~~p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e~~ 82 (487)
+.++|.++|++||+||++||||++|+.+|++||+++|+.||++.++||+|||||||||+||++|+|+|++||+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~ 81 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP 81 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccccCCCceeECCCCCEeccchHHHHHHHHHHHHHhH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCC--chHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHH
Q 048705 83 SHMG--PEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALA 160 (487)
Q Consensus 83 ~~~~--~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA 160 (487)
+.|+ +++||||||||||+|||||||++++.||.|||++..||.+|.+||+|+.+|++|.++.++|+|++++++|||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlA 161 (605)
T 1tf4_A 82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA 161 (605)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred HHHhhcCCcccHHHHHHHHHHHHHHhccCCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHH
Confidence 9996 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchh
Q 048705 161 ASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQS 240 (487)
Q Consensus 161 ~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~ 240 (487)
+||||||++||+||++||++||++|+||++||+.|...++ .++||+++++| .||++|||+|||+|||+++
T Consensus 162 aAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~--~~~~Y~s~s~~--------~DEl~WAAawLy~ATgd~~ 231 (605)
T 1tf4_A 162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP--AGAFYNSWSGY--------QDELVWGAYWLYKATGDDS 231 (605)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST--THHHHCCSSCS--------HHHHHHHHHHHHHHHCCHH
T ss_pred HHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC--ccccccCCCCC--------chHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999999999999999999887644 57889887777 9999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCchhhhHHHHHHHHHHHHhCCC-CCCCcc
Q 048705 241 YMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPE-SPTKLV 319 (487)
Q Consensus 241 Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~~~~~~~~~~ad~~~~~~~~~-~~~~~~ 319 (487)
|+++++.++..++. ..+.. .....+.|+|+++..|+.+||++ +.+ .+.+++.++.++|.++.+ +++ ++
T Consensus 232 Yl~~a~~~~~~~~~--~~~~~----~~~~~~~~~Wd~~~~g~~~lla~-~~~---~~~y~~~a~~~~~~~~~~~~~~-~~ 300 (605)
T 1tf4_A 232 YLAKAEYEYDFLST--EQQTD----LRSYRWTIAWDDKSYGTYVLLAK-ETG---KQKYIDDANRWLDYWTVGVNGQ-RV 300 (605)
T ss_dssp HHHHHHHHGGGSCB--CTTSS----CBCCSSCCSSSCCHHHHHHHHHH-HHC---CHHHHHHHHHHHHHTTTCBTTB-CC
T ss_pred HHHHHHHHHHhccc--ccccc----cccccccccccchHHHHHHHHHh-ccC---hHHHHHHHHHHHHHHhcccCCC-cc
Confidence 99999987754431 00000 00112579999999999988876 333 356888899998877643 343 78
Q ss_pred cccCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCC
Q 048705 320 TYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRK 399 (487)
Q Consensus 320 ~~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~ 399 (487)
++||+|+.|+..|++++|++|.+||+++|++++.. ..+.++|+++|++|||||||+||+++|||||||+|
T Consensus 301 ~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~a~~~~~----------~~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~ 370 (605)
T 1tf4_A 301 PYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNN 370 (605)
T ss_dssp CBCTTSCBCCCSSSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSS
T ss_pred ccCCCcceecCCccHHHHHHHHHHHHHHHHHhccc----------cccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCC
Confidence 89999999988999999999999999999987542 12368999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCC-CCCcccCCCccccccccccCchHHHHHH
Q 048705 400 FPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDI-NDQYNDTRINWSQSEPTTYINAPFVGVL 478 (487)
Q Consensus 400 ~p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~-~d~y~D~~~~~~~nEvaid~NA~lv~~l 478 (487)
+|++||||+++|+.. +.+..+.|||++|+|+||||||. .|+|.|+|.+|++|||||||||+||++|
T Consensus 371 ~p~~pHHR~ss~~~~-------------~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~l 437 (605)
T 1tf4_A 371 PPRNPHHRTAHGSWT-------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSAL 437 (605)
T ss_dssp CCSCCSCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHH
T ss_pred CCCCCcccccccCcc-------------ccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHHHH
Confidence 999999999987432 12445788999999999999998 9999999999999999999999999999
Q ss_pred HHhhc
Q 048705 479 SYFKA 483 (487)
Q Consensus 479 a~l~~ 483 (487)
|+|..
T Consensus 438 A~l~~ 442 (605)
T 1tf4_A 438 AMLVE 442 (605)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 5
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=7.9e-110 Score=903.99 Aligned_cols=436 Identities=34% Similarity=0.589 Sum_probs=383.8
Q ss_pred CchhHHHHHHHHHhhhHhhcCCCCCCCCCCCCCCCCCCCCCCCCccccccceeccCCCcccccchHHHHHHHHHHHHHhc
Q 048705 3 ASRDYGDALSKCVLFFEGQRSGKLPSTQRMTWRKDSALRDGADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFG 82 (487)
Q Consensus 3 ~~~~Y~~~l~~sl~fy~~QRsG~~p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~~a~~e~~ 82 (487)
+.++|.++|++||+||++||||++|+.+++.||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~~ 81 (614)
T 1g87_A 2 GTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDK 81 (614)
T ss_dssp -CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccccccCCCCeeeCCCCcEeccccHHHHHHHHHHHHHhH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCC--chHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHH
Q 048705 83 SHMG--PEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALA 160 (487)
Q Consensus 83 ~~~~--~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA 160 (487)
+.|+ +++||||||||||+|||||||+++|.||+|||++..||.+|.+||+|+.+|++|.++.++|||++++++|||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlA 161 (614)
T 1g87_A 82 DAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLA 161 (614)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHH
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHhccCCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHH
Confidence 9997 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchh
Q 048705 161 ASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQS 240 (487)
Q Consensus 161 ~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~ 240 (487)
+||||||++||+||++||++||++|+||++||+.+... ..++||++ ++| .||++|||+|||+|||+++
T Consensus 162 aAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~---~~~~~Y~s-s~~--------~DEl~WAAawLy~ATgd~~ 229 (614)
T 1g87_A 162 SAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYT---AASGYYSS-SSF--------YDDLSWAAVWLYLATNDST 229 (614)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCC---TTTTTSCC-SCS--------HHHHHHHHHHHHHHHCCHH
T ss_pred HHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCC---cCcCCcCC-CCc--------hhHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999999999986432 24788988 777 9999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHchhccCchhhhHHHHHHHHHHHHhCCCCCCCccc
Q 048705 241 YMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSKSDPFVRHADKFICSVLPESPTKLVT 320 (487)
Q Consensus 241 Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~ 320 (487)
|+++++.+...++. ..+.. .......|+|+++..|+++||++. .+. +.+++.++.+++.++.+.+..+++
T Consensus 230 Yl~~a~~~~~~~~~--~~~~~----~~~~~~~~~Wd~~~~g~~~lla~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 299 (614)
T 1g87_A 230 YLDKAESYVPNWGK--EQQTD----IIAYKWGQCWDDVHYGAELLLAKL-TNK---QLYKDSIEMNLDFWTTGVNGTRVS 299 (614)
T ss_dssp HHHHHHHTGGGSCB--CTTSS----SBCCSSCCBTTBCHHHHHHHHHHH-HCC---HHHHHHHHHHHHHHTTCBTTBCCE
T ss_pred HHHHHHHHHHhhcc--ccccc----cccccCCcCccchHHHHHHHHHhc-cCc---HHHHHHHHHHHHHhhhccCCCccc
Confidence 99999987654330 00000 001245799999999999988863 332 345566666665555444334788
Q ss_pred ccCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCCC
Q 048705 321 YSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKF 400 (487)
Q Consensus 321 ~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~ 400 (487)
+||+||.|+..|++++|++|++||+++|++++. |+ ..++++|+++|++|||||||+| ++|||||||+|+
T Consensus 300 ~tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~n--~~SyvvG~G~~~ 368 (614)
T 1g87_A 300 YTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEG-------CT--PSKVSVYKDFLKSQIDYALGST--GRSFVVGYGVNP 368 (614)
T ss_dssp ECTTSCEECCSSSHHHHHHHHHHHHHHHHHSTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSC
T ss_pred cCCCCceeccCCCcHHHHHHHHHHHHHHHHhhC-------CC--ccCHHHHHHHHHHHHHHhcCCC--CcceEeccCCCC
Confidence 999999999999999999999999999987531 32 2247899999999999999998 789999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHHHHHH
Q 048705 401 PRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSY 480 (487)
Q Consensus 401 p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~~la~ 480 (487)
|++||||+++||.. .+.+.+.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+
T Consensus 369 p~~pHHR~ss~~~~-------------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv~~lA~ 435 (614)
T 1g87_A 369 PQHPHHRTAHGSWT-------------DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAK 435 (614)
T ss_dssp CSCCBCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHHHHHHH
T ss_pred CCCCcchhhccCcc-------------ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHHHHHHH
Confidence 99999999998653 12456889999999999999999999999999999999999999999999999
Q ss_pred hhcC
Q 048705 481 FKAY 484 (487)
Q Consensus 481 l~~~ 484 (487)
|...
T Consensus 436 l~~~ 439 (614)
T 1g87_A 436 MYKH 439 (614)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9763
No 6
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=1.4e-110 Score=910.39 Aligned_cols=429 Identities=29% Similarity=0.500 Sum_probs=375.5
Q ss_pred CchhHHHHHHHHHhhhHhhcCCCCCC-CCCCCCCCCCCCCCC--------------------------CCCcccccccee
Q 048705 3 ASRDYGDALSKCVLFFEGQRSGKLPS-TQRMTWRKDSALRDG--------------------------ADVGVDLVGGYY 55 (487)
Q Consensus 3 ~~~~Y~~~l~~sl~fy~~QRsG~~p~-~~~~~w~~~s~~~Dg--------------------------~~~~~dlsGGW~ 55 (487)
++++|.++|++||+||++||||++|+ .+++.||++||++|+ .+.++||+||||
T Consensus 36 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p~~~~~~~~~~~~~~~y~~~~~~~~~~~~DlsGGwy 115 (611)
T 2yik_A 36 GEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSNRSVLDPDGDGKVDVSGGFH 115 (611)
T ss_dssp --CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEECSTTTBSSCHHHHHHHHHHHCTTCSSEECCCCSBC
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCcccccccccccccccccccccccccccccCCCCcccCCCCce
Confidence 46899999999999999999999887 899999999999998 678899999999
Q ss_pred ccCCCcccccchHHHHHHHHHHHHHhcccCC--chHHHHHHHHHHHHHHHHhc-----cCCCceeeEEeCCCCCCCCCCC
Q 048705 56 DAGDNIKFSFPMAFTTTMLAWSILEFGSHMG--PEQKNAQEALKWGTDYFLKA-----TSVPGKVIAQVGEPNADHNCWE 128 (487)
Q Consensus 56 DAGD~~Ky~~~~a~t~~~L~~a~~e~~~~~~--~~~pdiLde~kwg~d~llkm-----~~~~g~~y~~vg~~~~dh~~w~ 128 (487)
|||||+||++|+++|+++|+|+++||++.|+ +++||||||||||+|||||| |+.+|.||+|||++..||.+|+
T Consensus 116 DAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~~w~ 195 (611)
T 2yik_A 116 DAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWG 195 (611)
T ss_dssp CSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCEEEEEEEESCHHHHTTCCS
T ss_pred eCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCCCcEEEEeCCCCccccCCC
Confidence 9999999999999999999999999999886 78999999999999999999 6789999999999999999999
Q ss_pred CCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCcc
Q 048705 129 RPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYC 208 (487)
Q Consensus 129 ~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~ 208 (487)
+||+|+.+|++|.++.++|||++++++|||||+||||||++||+||++||++||++|+||++||+.|..+.. ..++||+
T Consensus 196 ~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~-~~~~~Y~ 274 (611)
T 2yik_A 196 APENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGED-GPKGYYG 274 (611)
T ss_dssp CGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGG-TTTTTSC
T ss_pred ChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCc-ccCcCCC
Confidence 999999999999999889999999999999999999999999999999999999999999999999965532 2477888
Q ss_pred CCCCccccCCcccchHHHHHHHHHHHHcCchhHHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHch
Q 048705 209 DFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISR 288 (487)
Q Consensus 209 s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla~ 288 (487)
+ ++| .||++|||+|||++||+++|+++++++...++ ...+.|+|+++..|++++|++
T Consensus 275 s-s~~--------~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~--------------~~~~~~~Wd~~~~g~~~lLa~ 331 (611)
T 2yik_A 275 S-SKW--------QDDYCWAAAWLYLATQNEHYLDEAFKYYDYYA--------------PPGWIHCWNDVWSGTACILAE 331 (611)
T ss_dssp C-CCS--------HHHHHHHHHHHHHHHCCHHHHHHHHHHCCTTS--------------TTTSCSBTTBCHHHHHHHHHH
T ss_pred C-CCc--------ccHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc--------------cCCccCccccchHHHHHHHHh
Confidence 7 777 99999999999999999999999998754322 234579999999999988876
Q ss_pred hccC----chh-hhHHHHHHHHH----------HHHhCC-CCCCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHh
Q 048705 289 LVMN----TSK-SDPFVRHADKF----------ICSVLP-ESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYL 352 (487)
Q Consensus 289 ~~~~----~~~-~~~~~~~ad~~----------~~~~~~-~~~~~~~~~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l 352 (487)
.... ... .+.+++.++.. +|+.++ .+++ ++++||+|+.|+..|++++|++|++||+++|++++
T Consensus 332 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~tp~Gl~~~~~WGs~~~~~~~afl~~~ya~~~ 410 (611)
T 2yik_A 332 INDLYDKDSQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGG-GITVTPGGYVFLNQWGSARYNTAAQLIALVYDKHH 410 (611)
T ss_dssp HHHHHSTTSSHHHHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTT-SSCBCTTSCBCSCSTTHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-eeccCCccccccCCCchHHHHHHHHHHHHHHHHhc
Confidence 3211 001 23444444432 122111 1223 67889999999889999999999999999998753
Q ss_pred hhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccccC
Q 048705 353 TRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKS 432 (487)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~ 432 (487)
. ...++|+++|++|||||||+||+++|||||||+|+|++||||+++||.. ...
T Consensus 411 ~------------~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~~---------------~~~ 463 (611)
T 2yik_A 411 G------------DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLKD---------------AND 463 (611)
T ss_dssp T------------SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCSC---------------TTC
T ss_pred C------------ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCccc---------------ccC
Confidence 2 2357999999999999999999999999999999999999999988742 345
Q ss_pred CCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHHHHHHhhc
Q 048705 433 KYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKA 483 (487)
Q Consensus 433 ~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~~la~l~~ 483 (487)
+.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|..
T Consensus 464 p~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~ 514 (611)
T 2yik_A 464 SSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYR 514 (611)
T ss_dssp CSCCSSCCTTCBCSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCceeecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999999976
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=6.7e-99 Score=823.22 Aligned_cols=412 Identities=19% Similarity=0.237 Sum_probs=350.6
Q ss_pred CCchhHHHHHHHHHhhhHhhcCC-CCCCCCCCC-CCCCCCCCCC--------CCCccccccceeccCCCcccccchHHHH
Q 048705 2 VASRDYGDALSKCVLFFEGQRSG-KLPSTQRMT-WRKDSALRDG--------ADVGVDLVGGYYDAGDNIKFSFPMAFTT 71 (487)
Q Consensus 2 i~~~~Y~~~l~~sl~fy~~QRsG-~~p~~~~~~-w~~~s~~~Dg--------~~~~~dlsGGW~DAGD~~Ky~~~~a~t~ 71 (487)
|++++|.++|++||+||++|||| .+|+.+++. ||++++|.|+ ++.++||+|||||||||+||++|+++++
T Consensus 124 I~~~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t~ 203 (639)
T 1clc_A 124 IAMNVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGITV 203 (639)
T ss_dssp ECTTTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHHH
T ss_pred echhhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHHH
Confidence 78999999999999999999999 699999998 9999888776 6789999999999999999999999999
Q ss_pred HHHHHHHHHhcccCC----------chHHHHHHHHHHHHHHHHhccC-CC-ceeeEEeCCCCCCCCCCCCCCCCCCCcee
Q 048705 72 TMLAWSILEFGSHMG----------PEQKNAQEALKWGTDYFLKATS-VP-GKVIAQVGEPNADHNCWERPEDMDTPRTS 139 (487)
Q Consensus 72 ~~L~~a~~e~~~~~~----------~~~pdiLde~kwg~d~llkm~~-~~-g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~ 139 (487)
++|+|+++||++.|. +++||||||||||+|||||||. ++ |.+|+|||++.++|. .+||+|+.+|++
T Consensus 204 ~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~--~~Pe~~~~~R~~ 281 (639)
T 1clc_A 204 GSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGF--IMPENEHDERFF 281 (639)
T ss_dssp HHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCS--CCGGGCCSCCEE
T ss_pred HHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCC--CCchhcCCCceE
Confidence 999999999988663 5689999999999999999986 45 999999999888885 999999999998
Q ss_pred eecCCCCCCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCC-CCCCCCCCCCCccCCCCccccCC
Q 048705 140 YVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSY-NTSVGSGVCPYYCDFDGYMNFMD 218 (487)
Q Consensus 140 ~~~~~~~pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~-~~~~~~~~~~~Y~s~~~y~~~~d 218 (487)
+. |+|++++++|||||+||||||++||+||++||++||++|+||++||+.+ ..+ ....++||++ ++|
T Consensus 282 ~~-----~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~-~~~~~g~Y~s-s~~----- 349 (639)
T 1clc_A 282 VP-----WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQ-SGFSTGEYAT-VSD----- 349 (639)
T ss_dssp EE-----ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCC-TTCCSCCCCC-SCS-----
T ss_pred ec-----CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCC-ccccccccCC-CCc-----
Confidence 86 4689999999999999999999999999999999999999999999995 443 2235678877 667
Q ss_pred cccchHHHHHHHHHHHHcCchhHHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHHHHc---hhccCc--
Q 048705 219 SAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLIS---RLVMNT-- 293 (487)
Q Consensus 219 ~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~lla---~~~~~~-- 293 (487)
.||++|||+|||++||+++|++++++++..++ ......|+|+++..+..++|+ +..+..
T Consensus 350 ---~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~-------------~~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~~ 413 (639)
T 1clc_A 350 ---ADDRLWAAAEMWETLGDEEYLRDFENRAAQFS-------------KKIEADFDWDNVANLGMFTYLLSERPGKNPAL 413 (639)
T ss_dssp ---HHHHHHHHHHHHHHHCCHHHHHHHHHHHHTCS-------------SSCCSSCCTTCCHHHHHHHHHHCCCSCCCHHH
T ss_pred ---chHHHHHHHHHHHHhCCHHHHHHHHHHHHhhc-------------cccCCCCCchhhHHHHHHHHHhhhhhccChHH
Confidence 99999999999999999999999998764332 011234599999888777665 222221
Q ss_pred -hh-hhHHHHHHHHHHHHhCCCCCCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHH
Q 048705 294 -SK-SDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRL 371 (487)
Q Consensus 294 -~~-~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y 371 (487)
+. ++.+++.++.+++.. +.+|+ +++++ .++ .|+++++++|.+|+++++.+ +. ++++|
T Consensus 414 ~~~~~~~~~~~a~~~~~~~-~~~~~-g~~~~-~~~----~WGsn~~~~~~a~~~~~a~~-l~-------------~~~~~ 472 (639)
T 1clc_A 414 VQSIKDSLLSTADSIVRTS-QNHGY-GRTLG-TTY----YWGCNGTVVRQTMILQVANK-IS-------------PNNDY 472 (639)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTSTT-CCTTT-TCC----CTTHHHHHHHTHHHHHHHHH-HS-------------CCHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-cCCCC-CcccC-CCC----CCchHHHHHHHHHHHHHHHh-cC-------------CHHHH
Confidence 23 677888889988654 66776 45544 333 36777888888988887753 32 46899
Q ss_pred HHHHHHhchhhcCCCCCCCceEeeeCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCC-
Q 048705 372 IQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDI- 450 (487)
Q Consensus 372 ~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~- 450 (487)
+++|++|||||||+||+++|||||||.|+|++||||.++++. .|++++|+||||||.
T Consensus 473 ~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~----------------------~~~~~~GalVGGP~~~ 530 (639)
T 1clc_A 473 VNAALDAISHVFGRNYYNRSYVTGLGINPPMNPHDRRSGADG----------------------IWEPWPGYLVGGGWPG 530 (639)
T ss_dssp HHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSSCBCHHHHHSS----------------------CSSCCSSCBCCCCCSS
T ss_pred HHHHHHHHhhccCCCCCCceEEEecCCCCCCCCcchhhccCC----------------------CCCCCCeeeecCCCcc
Confidence 999999999999999999999999999999999999654321 125689999999999
Q ss_pred CCCcccCCCccccccccccCchHHHHHHHHhhcCCC
Q 048705 451 NDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAYPH 486 (487)
Q Consensus 451 ~d~y~D~~~~~~~nEvaid~NA~lv~~la~l~~~~~ 486 (487)
.|+|.|+|.+|++|||+|||||+|+++++++...+.
T Consensus 531 ~d~y~D~r~~y~~nE~~~~~nA~~v~~la~~~~~~~ 566 (639)
T 1clc_A 531 PKDWVDIQDSYQTNEIAINWNAALIYALAGFVNYNS 566 (639)
T ss_dssp TTCCCCCTTCTTTSBCCHHHHHHHHHHHHTTTTCC-
T ss_pred ccccccCcccceeccccccchHHHHHHHHHhhhccc
Confidence 999999999999999999999999999999987643
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=1.6e-99 Score=813.13 Aligned_cols=410 Identities=22% Similarity=0.345 Sum_probs=345.3
Q ss_pred CCchhHHHHHHHHHhhhHhhcCCC-CCCCCCCCCCCCCCCCC-----CCCCccccccceeccCCCcccccchHHHHHHHH
Q 048705 2 VASRDYGDALSKCVLFFEGQRSGK-LPSTQRMTWRKDSALRD-----GADVGVDLVGGYYDAGDNIKFSFPMAFTTTMLA 75 (487)
Q Consensus 2 i~~~~Y~~~l~~sl~fy~~QRsG~-~p~~~~~~w~~~s~~~D-----g~~~~~dlsGGW~DAGD~~Ky~~~~a~t~~~L~ 75 (487)
|++++|.++|+++|+||++||||+ +|+.++++||++++|.| |.+.++||+|||||||||+||++|+++|+++|+
T Consensus 83 I~~~~Y~~~l~~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L~ 162 (537)
T 3gzk_A 83 IHRRAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADLL 162 (537)
T ss_dssp EETTTTHHHHHHHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHHH
T ss_pred eCcchHHHHHHHHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHHH
Confidence 789999999999999999999998 99999999998876643 456889999999999999999999999999999
Q ss_pred HHHHHhcccCC---------ch--HHHHHHHHHHHHHHHHhccC-CCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecC
Q 048705 76 WSILEFGSHMG---------PE--QKNAQEALKWGTDYFLKATS-VPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVN 143 (487)
Q Consensus 76 ~a~~e~~~~~~---------~~--~pdiLde~kwg~d~llkm~~-~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~ 143 (487)
|++++|++.|. ++ +||||||||||+|||||||+ ++|.+|+|||+..+ ...|.+||+|+.+|+++.++
T Consensus 163 ~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w-~g~~~~Pe~~~~~R~~~~~~ 241 (537)
T 3gzk_A 163 LAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSF-PPLDTRPEDDDAPLVLSPIS 241 (537)
T ss_dssp HHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSC-CCTTCCGGGCCSCEEECCBC
T ss_pred HHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCc-CCCCcCcccCCCcceEeecC
Confidence 99999987662 56 99999999999999999998 56999999998532 12248999999999998764
Q ss_pred CCCCCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccch
Q 048705 144 TTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQD 223 (487)
Q Consensus 144 ~~~pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~D 223 (487)
+.+++++|||||+||||||++||+||++||++||++|+||++||+.+..+......++|++ ++| .|
T Consensus 242 -----t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~-~~~--------~D 307 (537)
T 3gzk_A 242 -----YAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGD-AEL--------RD 307 (537)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCC-SCC--------HH
T ss_pred -----CcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCC-Ccc--------ch
Confidence 5678999999999999999999999999999999999999999998643322224677777 666 99
Q ss_pred HHHHHHHHHHHHcCchhHHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcchhhHHHHH--HHchhcc-Cc---hh-h
Q 048705 224 ELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDAKHAGINV--LISRLVM-NT---SK-S 296 (487)
Q Consensus 224 e~~wAA~~Ly~aTg~~~Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~~~~g~~~--lla~~~~-~~---~~-~ 296 (487)
|++|||+|||++||+.+|+++++++... .....|+|+++.+++++ |+++... +. ++ +
T Consensus 308 el~wAA~~Ly~aTgd~~Yl~~a~~~~~~----------------~~~~~~~Wd~~~~~~~~~ll~~~~~~~~~~~~~~~~ 371 (537)
T 3gzk_A 308 ELLWASCALLRMTGDSAWARVCEPLLDL----------------DLPWELGWADVALYGVMDYLRTPRAAVSDDVRNKVK 371 (537)
T ss_dssp HHHHHHHHHHHHHCCGGGHHHHHHHHHS----------------CCCCCCSSSCCHHHHHHHHHTSCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHhhhc----------------cCCCccchHHhHHHHHHHHHhCccccCCHHHHHHHH
Confidence 9999999999999999999999886531 11258999999887653 4454321 21 22 6
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHH-
Q 048705 297 DPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVA- 375 (487)
Q Consensus 297 ~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~~~n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a- 375 (487)
+.+++.++.++ ..++.+|+ ++.+++++|.| +++++++|.+++++++.+ ++ ++.+|+++|
T Consensus 372 ~~~~~~ad~~~-~~~~~~~~-g~~~~~~~~~W----Gsn~~~~n~a~~l~~a~~-~~-------------~~~~y~~~aa 431 (537)
T 3gzk_A 372 SRLLRELDALA-AMAESHPF-GIPMRDDDFIW----GSNMVLLNRAMAFLLAEG-VG-------------VLHPAAHTVA 431 (537)
T ss_dssp HHHHHHHHHHH-HHHHHSTT-CCSCCGGGCCT----THHHHHHHHHHHHHHHGG-GT-------------CCCTTHHHHH
T ss_pred HHHHHHHHHHH-HhccCCCC-ceeecCCCCcc----cchHHHHHHHHHHHHHhh-cc-------------CCHHHHHHHH
Confidence 77788888886 44466776 77788888875 556678888888877654 22 356799999
Q ss_pred HHhchhhcCCCCCCCceEeeeCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccccCCCCCCCCccceeecCCCCC----
Q 048705 376 KTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDIN---- 451 (487)
Q Consensus 376 ~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR~a~~~~~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~---- 451 (487)
++|||||||+||+++|||||||+|+|++||||.++|++ ++++++|+||||||..
T Consensus 432 ~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~s~~~~----------------------~~~p~~GalVGGPn~~~~D~ 489 (537)
T 3gzk_A 432 QRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVADD----------------------VDHPVPGMVVGGPNRHLQDE 489 (537)
T ss_dssp HHHHHHHBTCSTTCCBCBBTCSSSCBCSCBCHHHHHHC----------------------TTSCCTTCBCCCCCTTCCSH
T ss_pred HHhHHHhcCCCCCCceeEecCCCCCCCCCcchhhhcCC----------------------CCCCCCCCCccCCCcccccc
Confidence 99999999999999999999999999999999876532 1356899999999976
Q ss_pred ------------CCcccCCCccccccccccCchHHHHHHHHhhcC
Q 048705 452 ------------DQYNDTRINWSQSEPTTYINAPFVGVLSYFKAY 484 (487)
Q Consensus 452 ------------d~y~D~~~~~~~nEvaid~NA~lv~~la~l~~~ 484 (487)
|+|.|+|.+|++||||||||||||++||+|.+.
T Consensus 490 ~~~~~~~~~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~ 534 (537)
T 3gzk_A 490 IARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEA 534 (537)
T ss_dssp HHHHHCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHSC
T ss_pred hhhhcccCCCcccCcCCCCccccccccchHHHHHHHHHHHHHHHh
Confidence 799999999999999999999999999999864
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.1e-97 Score=810.94 Aligned_cols=445 Identities=21% Similarity=0.313 Sum_probs=362.9
Q ss_pred CCchhHHHHHHHHHhhhHhhcCCC---CCCCCCCCCCCCCCCCC-----------------------CCCCcccccccee
Q 048705 2 VASRDYGDALSKCVLFFEGQRSGK---LPSTQRMTWRKDSALRD-----------------------GADVGVDLVGGYY 55 (487)
Q Consensus 2 i~~~~Y~~~l~~sl~fy~~QRsG~---~p~~~~~~w~~~s~~~D-----------------------g~~~~~dlsGGW~ 55 (487)
|++++|.++|+++|+||++||||. +|...++.|+|+++|.| |.+.++||+||||
T Consensus 96 I~~~~Y~~~l~~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGwy 175 (609)
T 1ut9_A 96 IRKDIYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWY 175 (609)
T ss_dssp ECTTTTTTHHHHHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSBC
T ss_pred eCHHHHHHHHHHHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCee
Confidence 788999999999999999999995 56666778988766554 3467899999999
Q ss_pred ccCCCcccccchHHHHHHHHHHHHHhcc-------cCC----------chHHHHHHHHHHHHHHHHhccCCCc---eeeE
Q 048705 56 DAGDNIKFSFPMAFTTTMLAWSILEFGS-------HMG----------PEQKNAQEALKWGTDYFLKATSVPG---KVIA 115 (487)
Q Consensus 56 DAGD~~Ky~~~~a~t~~~L~~a~~e~~~-------~~~----------~~~pdiLde~kwg~d~llkm~~~~g---~~y~ 115 (487)
|||||+||++|+++++++|++.|+.++. .|. +++||||||||||+|||||||..+| .+|.
T Consensus 176 DAGD~~K~~~p~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~g~~~~~~g 255 (609)
T 1ut9_A 176 DAGDHGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTEKEDPSIAG 255 (609)
T ss_dssp CSSSSCEEHHHHHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCTTTCGGGTT
T ss_pred eCCCCCeecCchHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence 9999999999999999888877877642 231 5689999999999999999999877 7889
Q ss_pred EeCCCCCCCCCC---CCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHcc
Q 048705 116 QVGEPNADHNCW---ERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQ 192 (487)
Q Consensus 116 ~vg~~~~dh~~w---~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p 192 (487)
||+++..||..| .+||+|+.+|++. +|+|++++++|||||+||||||++||+||++||++||++|+||++||
T Consensus 256 ~v~~~~~D~~w~g~~~~Pe~~~~~R~~~-----~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~ 330 (609)
T 1ut9_A 256 MVHHKIHDFRWTALGMLPHEDPQPRYLR-----PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHP 330 (609)
T ss_dssp CEECEEEESSCCCSSCCGGGCCSBEEEC-----CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred EecCCCCCcccCCCCCChhhCCCceeec-----CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 999888899766 5899999999873 47899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC---CCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchhHHHHHHHhhhhhhhhhhhh-----hhhhh
Q 048705 193 GSYNTSVG---SGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQ-----SKEAL 264 (487)
Q Consensus 193 ~~~~~~~~---~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~~~~~~~~~~-----~~~~~ 264 (487)
+.|.+.++ ...++||++ ++| .||++|||+|||+||||++|+++++++...+..+.... ..+
T Consensus 331 ~~y~~~~~~~~~~~~~~Y~s-s~~--------~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~-- 399 (609)
T 1ut9_A 331 DIYAEYTPGSGGPGGGPYND-DYV--------GDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGE-- 399 (609)
T ss_dssp TCCBCCCCSSSSCBSCCCCB-SCC--------HHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGG--
T ss_pred ccccccccccCccCCCCCCC-CCc--------ccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccc--
Confidence 99976532 234678887 667 99999999999999999999999988653221000000 000
Q ss_pred hcCCCccccCcchhhHHHHHHHch--hccCc---hh-hhHHHHHHHHHHHHhCCCC---CCCcccccCCCceecCCCCch
Q 048705 265 FVGGSFAEFGWDAKHAGINVLISR--LVMNT---SK-SDPFVRHADKFICSVLPES---PTKLVTYSSGGLLFKPGGSNS 335 (487)
Q Consensus 265 f~~~~~~~~~W~~~~~g~~~lla~--~~~~~---~~-~~~~~~~ad~~~~~~~~~~---~~~~~~~t~~g~~w~~~~~n~ 335 (487)
.......|+||++.++++++|+. ..+.. .. ++.++..++.++|....+. ++....+||+||. |+++
T Consensus 400 -~~~~~~~f~Wd~~~~~~~~lla~~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~~----WGs~ 474 (609)
T 1ut9_A 400 -DNGLWGCFTWGTTQGLGTITLALVENGLPATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGYP----WGSN 474 (609)
T ss_dssp -GTTCBSSCCSSCCHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSCC----TTHH
T ss_pred -cccCccccchhhhHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCcc----cccC
Confidence 01234579999999999888873 22332 23 6778899999998764432 3333456788986 4788
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCCCCCCCCCCCCCCCCCC
Q 048705 336 QHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSID 415 (487)
Q Consensus 336 ~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR~a~~~~~~ 415 (487)
+|++|.+|+++++.+ ++ ++.+|+++|++|||||||+||+++|||||||+|+|++||||+++.+...
T Consensus 475 ~~~~n~a~~~~~a~~-~~-------------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~ 540 (609)
T 1ut9_A 475 SFILNQMIVMGYAYD-FT-------------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSK 540 (609)
T ss_dssp HHHHHHHHHHHHHHH-HH-------------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCT
T ss_pred HHHHHHHHHHHHHHH-hc-------------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccc
Confidence 999999999887754 32 4679999999999999999999999999999999999999987765433
Q ss_pred CCC-CccccCCCcccccCCCCCCCCccceeecCCCCCCCcccCCCccccccccccCchHHHHHHHHhhcC
Q 048705 416 THP-KHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDINDQYNDTRINWSQSEPTTYINAPFVGVLSYFKAY 484 (487)
Q Consensus 416 ~~p-~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~d~y~D~~~~~~~nEvaid~NA~lv~~la~l~~~ 484 (487)
..| .+.+|..|. .++..|||++ .|+|||||+..|+|.|+|.+|++|||||||||+||++||+|..+
T Consensus 541 ~~~~~~~G~l~Gg--p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 541 RFPAPPPGIISGG--PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp TSCCCCSSCBCCC--CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCC--CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 333 346888774 4455677777 89999999999999999999999999999999999999999764
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.1e-67 Score=564.93 Aligned_cols=392 Identities=21% Similarity=0.308 Sum_probs=278.1
Q ss_pred CCchhH-HHHHHHHHhhhHhhcCCCC--CCCCCCCCCCCCCCCCCCCCccccccceecc-CCCcccccchHHHH------
Q 048705 2 VASRDY-GDALSKCVLFFEGQRSGKL--PSTQRMTWRKDSALRDGADVGVDLVGGYYDA-GDNIKFSFPMAFTT------ 71 (487)
Q Consensus 2 i~~~~Y-~~~l~~sl~fy~~QRsG~~--p~~~~~~w~~~s~~~Dg~~~~~dlsGGW~DA-GD~~Ky~~~~a~t~------ 71 (487)
|++++| .++++++|+||++||||.+ +.+.+++|+++ +.++||+|||||| |||+||++|+|||+
T Consensus 91 I~~~vy~~~~l~~sl~ff~~QRsG~~~~~~d~~~~~~~~-------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npqQ 163 (586)
T 3h7l_A 91 VGEHILLNQTLSDVIHYFKSQRCGGVFDQQDRQVPVLNA-------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQQ 163 (586)
T ss_dssp EETTHHHHHHHHHHHHHHHHTBCCHHHHHHTTSEEETTT-------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCCC
T ss_pred EccchhhHHHHHHHHHHHHHhcCCCCCCCCCceeeecCC-------CceeecccccccCCCCcceeccchhhhhhcccch
Confidence 788997 8999999999999999974 55678888863 6789999999999 99999999999887
Q ss_pred -HHHHHHHHH----hcccCC-ch--HHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCcee--ee
Q 048705 72 -TMLAWSILE----FGSHMG-PE--QKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTS--YV 141 (487)
Q Consensus 72 -~~L~~a~~e----~~~~~~-~~--~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~--~~ 141 (487)
++|+|++++ +++.+. ++ +||||||||||+|||||||+++|.||+|||++ |..+ +++|.+ +.
T Consensus 164 ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~g~~y~qVgd~------W~~d---~~~R~~~~~~ 234 (586)
T 3h7l_A 164 TPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEKGFFYMTVFDK------WSKD---TAQREICAYE 234 (586)
T ss_dssp HHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTTSCBBCEEECT------TCCC---GGGCEEEEEE
T ss_pred hhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCCCeEEEEecCC------CCCC---CCcccccccc
Confidence 467777665 454444 34 89999999999999999999999999999984 6532 556765 32
Q ss_pred cCCCCC-------CcHHHHHHHHHHHHhhhhhccccHHH-HHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCc
Q 048705 142 VNTTNP-------GSEVSAEIAAALAASSIVFKSANSQY-SKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGY 213 (487)
Q Consensus 142 ~~~~~p-------gs~~~~~~aAalA~as~vf~~~D~~~-A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y 213 (487)
+..+.+ .+..++++|||||+|||||+ |++| +++||++|+++|+|+++||+.|... .+ ++|
T Consensus 235 ~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~--d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~---------g~-~~~ 302 (586)
T 3h7l_A 235 TQLGHKFDDYQAGFRQGGGVAIAALAAASRLGV--HGEYDQQKYRNAAENGYWHLKEHNTQYLND---------GE-ENI 302 (586)
T ss_dssp TTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSS--CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT---------SC-CCH
T ss_pred CCCCCCCcceecCCCCcHHHHHHHHHHHhcccC--CCCcChHHHHHHHHHHHHHHHhcCccccCC---------CC-ccc
Confidence 221111 12456789999999999998 7889 8999999999999999998876432 01 445
Q ss_pred cccCCcccchHH--HHHHHHHHHHcCchhHHHHHHHhhhhhhhhhhhhhhhhhhcCCCccccCcch-----------hhH
Q 048705 214 MNFMDSAFQDEL--IWAAAWLFKATNRQSYMKYVVDNIHYLENSTMRQSKEALFVGGSFAEFGWDA-----------KHA 280 (487)
Q Consensus 214 ~~~~d~~~~De~--~wAA~~Ly~aTg~~~Y~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~W~~-----------~~~ 280 (487)
.||+ +|||+|||++||+.+||++++.+...+. ..|.......+.|.. ..+
T Consensus 303 --------~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~---------~~~~~~~~~g~~w~~~d~~~r~~~d~a~~ 365 (586)
T 3h7l_A 303 --------IDEYCALLASVELFKATKETRYLEESRLWAQRLV---------ARQMSDEQIQHFWSANQDGSRPYFHAAEA 365 (586)
T ss_dssp --------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH---------TTEECCSSCSSEEBSSSSSSSBCCCTTTT
T ss_pred --------hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH---------HhccCCccCCCcCCCcccCCccccccccc
Confidence 8999 9999999999999999999998765443 112222334577763 223
Q ss_pred HHH-HHHch--hccCch----h-hhHHHHHHHHHHHHh-CCCCCCC-----------------cccccC-CCceecCCCC
Q 048705 281 GIN-VLISR--LVMNTS----K-SDPFVRHADKFICSV-LPESPTK-----------------LVTYSS-GGLLFKPGGS 333 (487)
Q Consensus 281 g~~-~lla~--~~~~~~----~-~~~~~~~ad~~~~~~-~~~~~~~-----------------~~~~t~-~g~~w~~~~~ 333 (487)
++. +.|++ ..+++. + ++.++..++..+... -..+||+ ++++.+ .||.| +|+
T Consensus 366 gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~W--qGs 443 (586)
T 3h7l_A 366 GLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWW--QGE 443 (586)
T ss_dssp THHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCC--CCC
T ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCee--eCh
Confidence 222 22221 233322 2 555666666433211 1123321 233332 45554 455
Q ss_pred chHHHHHHHHHHHHHHHHhhhcccccccCCCcCChHHHHHHHHHhchhhcCCCCCCCceEeeeCCCCCCCCCCCCCCCCC
Q 048705 334 NSQHVTAMSFLLLVYSRYLTRFHRSLECGNIAVTPSRLIQVAKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPS 413 (487)
Q Consensus 334 n~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR~a~~~~ 413 (487)
|. +++|.|++++++.+.+... ....+|+++|++|||||||+||+++|||||||+|+|+ ||.+.
T Consensus 444 N~-~~an~a~~~~~a~~~~~~~----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~--- 506 (586)
T 3h7l_A 444 NA-RLGSLATMAYLAQPHIASQ----------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQY--- 506 (586)
T ss_dssp HH-HHHHHHHHHHHSGGGCCCH----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGG---
T ss_pred HH-HHHHHHHHHHHHHHhcCCc----------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCccc---
Confidence 55 5667777777665432210 0138999999999999999999999999999999876 78531
Q ss_pred CCCCCCccccCCCcccccCCCCCCCCccceeecCCCCC--C----------CcccCCCccccccccccCchHHHHHHH
Q 048705 414 IDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDIN--D----------QYNDTRINWSQSEPTTYINAPFVGVLS 479 (487)
Q Consensus 414 ~~~~p~~~~c~~g~~~~~~~~p~~~~~~GalvGGPn~~--d----------~y~D~~~~~~~nEvaid~NA~lv~~la 479 (487)
+ .| + +||.|+|||+.. | +..|...+|..+|--|=--|=|..+++
T Consensus 507 ------------~-------~~--~-~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~ 562 (586)
T 3h7l_A 507 ------------G-------FF--N-AKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIM 562 (586)
T ss_dssp ------------T-------BC--C-CTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHH
T ss_pred ------------C-------CC--C-CCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHH
Confidence 1 12 2 689999999753 2 233566799999988866555544444
No 11
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.73 E-value=0.26 Score=50.34 Aligned_cols=146 Identities=15% Similarity=0.150 Sum_probs=81.0
Q ss_pred cccccchHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHh-ccCCC-ceeeEEeCCCCCCCCCCCCCCCCCCCce
Q 048705 61 IKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLK-ATSVP-GKVIAQVGEPNADHNCWERPEDMDTPRT 138 (487)
Q Consensus 61 ~Ky~~~~a~t~~~L~~a~~e~~~~~~~~~pdiLde~kwg~d~llk-m~~~~-g~~y~~vg~~~~dh~~w~~Pe~~~~~R~ 138 (487)
.|.+.-.+--+..++.++..+ +.|+.|+.++-+++||++ |.+++ |++|..+-++ .|.+ ..+.
T Consensus 48 ~k~l~~n~r~i~~~a~a~~~~------g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG--------~~~~--~~~~ 111 (402)
T 3gt5_A 48 HRHLVSSTRFVFNYAMAYLQF------GTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD--------RVED--DTNH 111 (402)
T ss_dssp EEEHHHHHHHHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT--------EEEE--CCEE
T ss_pred chhHHHHHHHHHHHHHHHHhh------CChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC--------CCCc--CCcc
Confidence 466554454455555444443 347899999999999988 44555 8888777321 1110 1122
Q ss_pred eeecCCCCCCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHcc-----CCCCCCCCCCCCCCccCCCCc
Q 048705 139 SYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQ-----GSYNTSVGSGVCPYYCDFDGY 213 (487)
Q Consensus 139 ~~~~~~~~pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p-----~~~~~~~~~~~~~~Y~s~~~y 213 (487)
+| ..+-+++|++. ..+.-|+ ++|+.|+++++...++- |.|.+... ..+
T Consensus 112 ly------------d~Af~i~al~~-~~~tgd~----~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~----------~~~ 164 (402)
T 3gt5_A 112 CY------------GLAFVMLAYSC-GLKVGIK----QAREWMDETWCLLERHFWDAEYGLYKDEAD----------AQW 164 (402)
T ss_dssp HH------------HHHHHHHHHHH-HHHTTCT----THHHHHHHHHHHHHHHTEETTTTEECCEEC----------TTC
T ss_pred hH------------HHHHHHHHHHH-HHHhCCh----hHHHHHHHHHHHHHHHhcCCcCCCchhhhC----------CCC
Confidence 22 12223333333 2233355 57888999999988861 22221100 000
Q ss_pred cccCC-cccchH--HHHHHHHHHHHcCchhHHHHHHHhhh
Q 048705 214 MNFMD-SAFQDE--LIWAAAWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 214 ~~~~d-~~~~De--~~wAA~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
. -.+ ....+- ++-|.+.||++||+++|++.+.+...
T Consensus 165 ~-~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~ 203 (402)
T 3gt5_A 165 N-FTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLAD 203 (402)
T ss_dssp C-BCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 0 000 001122 45689999999999999999877554
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.49 E-value=0.33 Score=48.84 Aligned_cols=149 Identities=10% Similarity=0.013 Sum_probs=85.1
Q ss_pred cccccchHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHhc-cCCCceeeEEeCCCCCCCCCCCCCCCCCCCcee
Q 048705 61 IKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKA-TSVPGKVIAQVGEPNADHNCWERPEDMDTPRTS 139 (487)
Q Consensus 61 ~Ky~~~~a~t~~~L~~a~~e~~~~~~~~~pdiLde~kwg~d~llkm-~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~ 139 (487)
-|...-.|-.+..++.++... + +-|+.++.++-+++||++- ++++|++|+.+.. |. .|.+. .+.+
T Consensus 49 eK~l~~nar~i~~~a~a~~~~---~--~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~---dg----~~~~~--~~~~ 114 (388)
T 2gz6_A 49 DKFIWLQNRQVWTFSMLCNQL---E--KRENWLKIARNGAKFLAQHGRDDEGNWYFALTR---GG----EPLVQ--PYNI 114 (388)
T ss_dssp CEEHHHHHHHHHHHHHHHHHT---C--CCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECT---TS----CBCCC--CCCH
T ss_pred chhHHHHHHHHHHHHHHHHHh---c--CCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC---CC----CcccC--Ccch
Confidence 466544444444444333331 1 2367899999999999986 5668999887731 11 11111 1111
Q ss_pred eecCCCCCCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHcc----CCCCCCCCCCCCCCccCCCCccc
Q 048705 140 YVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQ----GSYNTSVGSGVCPYYCDFDGYMN 215 (487)
Q Consensus 140 ~~~~~~~pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p----~~~~~~~~~~~~~~Y~s~~~y~~ 215 (487)
..-+-++.+|+.++++.. |+ ++|+.|++++++..++- +.+.... .....+
T Consensus 115 ----------~~~af~i~al~~~y~~tg--~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~--------~~~~~~-- 168 (388)
T 2gz6_A 115 ----------FSDCFAAMAFSQYALASG--EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTY--------PGTRPM-- 168 (388)
T ss_dssp ----------HHHHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHTC----------------------CCCC--
T ss_pred ----------HHHHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHHHhcCCCcccCccc--------CCCCCC--
Confidence 223556777777777765 45 56888888888888752 1111110 000000
Q ss_pred cCCcccchHHHHHHHHHHHHcCchhHHHHHHHhhh
Q 048705 216 FMDSAFQDELIWAAAWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 216 ~~d~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
...+..--++.|.+.||++|++++|++.+.+...
T Consensus 169 -~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~ 202 (388)
T 2gz6_A 169 -KALAVPMILANLTLEMEWLLPQETLENVLAATVQ 202 (388)
T ss_dssp -EETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 0000011356788999999999999998877654
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.01 E-value=0.24 Score=49.71 Aligned_cols=71 Identities=20% Similarity=0.297 Sum_probs=49.3
Q ss_pred HHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHH---HH
Q 048705 153 AEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIW---AA 229 (487)
Q Consensus 153 ~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~w---AA 229 (487)
+.+..+|.-++++.. |+ ++++.|+++..+.......+. . .+| .||..| |.
T Consensus 49 a~~~~~l~d~~~~tg--d~----~y~~~a~~~~~~~~~~~~~~~-----------~--~~~--------~DD~a~~~la~ 101 (349)
T 3k7x_A 49 AHLVEVRLDAYLRTK--KQ----ADLEVAEKTYLHNKNRNGGTL-----------I--HDF--------YDDMLWNALAA 101 (349)
T ss_dssp HHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHHHTTSSS-----------C--CSB--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHhcCCCCC-----------C--ccC--------ccHHHHHHHHH
Confidence 344588888888876 45 567777887777765321110 0 234 566544 89
Q ss_pred HHHHHHcCchhHHHHHHHhhh
Q 048705 230 AWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 230 ~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
+.+|++|++++||+.++....
T Consensus 102 ~~aye~t~~~~yL~~A~~l~~ 122 (349)
T 3k7x_A 102 YRLYKATGKSIYLEDAQLVWQ 122 (349)
T ss_dssp HHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHCCchHHHHHHHHHH
Confidence 999999999999999887654
No 14
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.84 E-value=0.58 Score=47.02 Aligned_cols=118 Identities=8% Similarity=-0.029 Sum_probs=72.2
Q ss_pred HHHH-HhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhh-hccccHHHHHHH
Q 048705 100 TDYF-LKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIV-FKSANSQYSKIL 177 (487)
Q Consensus 100 ~d~l-lkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~v-f~~~D~~~A~~~ 177 (487)
+.|. .++++..|+||+.+.. |.. ..|. .+ .....+.++.++|.|+++ ++ +| .+
T Consensus 21 l~fw~~~~~D~~GGf~~~~~~---d~~--~~~~----eK----------~l~~nar~i~~~a~a~~~~~~--~~----~~ 75 (388)
T 2gz6_A 21 LPFWENHSLDSEGGYFTCLDR---QGK--VYDT----DK----------FIWLQNRQVWTFSMLCNQLEK--RE----NW 75 (388)
T ss_dssp HHHHHHHCBCTTSSBCCEEBT---TSC--EEEC----CE----------EHHHHHHHHHHHHHHHHHTCC--CH----HH
T ss_pred HHHHHhcCCCCCCCEEeEECC---CCC--cCCc----ch----------hHHHHHHHHHHHHHHHHHhcC--CH----HH
Confidence 3444 5677777788888864 211 1111 11 223458899999999998 55 45 67
Q ss_pred HHHHHHHHHHHHHc-cCCCCCCCCCCCCCCccCCCCcc-ccC-CcccchH--HHHHHHHHHHHcCchhHHHHHHHhhh
Q 048705 178 LQRASQVFQFADQY-QGSYNTSVGSGVCPYYCDFDGYM-NFM-DSAFQDE--LIWAAAWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 178 l~~A~~~y~~a~~~-p~~~~~~~~~~~~~~Y~s~~~y~-~~~-d~~~~De--~~wAA~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
++.|++..+|..++ ... ..+||.+...-| +-. .....|. +++|.+++|++||+++|++.+++...
T Consensus 76 ~~~A~~~~~~l~~~~~~~--------~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~~~ 145 (388)
T 2gz6_A 76 LKIARNGAKFLAQHGRDD--------EGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAKDVAMQAYN 145 (388)
T ss_dssp HHHHHHHHHHHHHHSBCT--------TSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC--------CCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 88999999999987 211 123332211000 001 1111222 46788999999999999999887654
No 15
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=95.22 E-value=0.26 Score=49.43 Aligned_cols=123 Identities=14% Similarity=0.088 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHHHHHH-HhccCC--CceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhh
Q 048705 88 EQKNAQEALKWGTDYF-LKATSV--PGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSI 164 (487)
Q Consensus 88 ~~pdiLde~kwg~d~l-lkm~~~--~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~ 164 (487)
+-+..|+.++-..++| .+-.++ .|+++-++. +..|+. +-..+.++.++|..++
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------------~~~~kn------aisN~~~~~~la~l~~ 164 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------------QMYYKN------TPVNAPFIILSCWLYN 164 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------------EEEEEE------HHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------------Cccccc------hhhHHHHHHHHHHHHH
Confidence 3467888888888888 444333 355543321 122331 2234566777777777
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHHc---c-CCCCCCCCCCCCCCccCCCCccccCCc--ccc---hHHHHHHHHHHHH
Q 048705 165 VFKSANSQYSKILLQRASQVFQFADQY---Q-GSYNTSVGSGVCPYYCDFDGYMNFMDS--AFQ---DELIWAAAWLFKA 235 (487)
Q Consensus 165 vf~~~D~~~A~~~l~~A~~~y~~a~~~---p-~~~~~~~~~~~~~~Y~s~~~y~~~~d~--~~~---De~~wAA~~Ly~a 235 (487)
++. |+ ++|+.|+++|+|.+++ + +.+.+.+.... .+. .+. .+. --++.|+++||++
T Consensus 165 ~tg--d~----~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~-------~g~---~~~~~~~tYnqg~~l~g~~~LY~~ 228 (349)
T 3k7x_A 165 ELN--ET----KYLEWAMKTYEWQTKVLVREDGFVEDGINRLE-------DGT---IDYEWKFTYNQGVYIGANLELYRI 228 (349)
T ss_dssp HHC--CH----HHHHHHHHHHHHHHHHHBCTTSCBCCEECTTS-------SSC---BCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HhC--CH----HHHHHHHHHHHHHHhcCCCCCCeEecCCccCC-------CCc---cCCcCeeeHHHHHHHHHHHHHHHh
Confidence 775 44 6899999999999885 1 11222110000 000 000 111 1378999999999
Q ss_pred cCchhHHHHHHHhhh
Q 048705 236 TNRQSYMKYVVDNIH 250 (487)
Q Consensus 236 Tg~~~Y~~~~~~~~~ 250 (487)
||+++|++.+++...
T Consensus 229 T~d~~yl~~a~~l~~ 243 (349)
T 3k7x_A 229 TKEAIYLDTANKTAA 243 (349)
T ss_dssp HCCHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHH
Confidence 999999999987653
No 16
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=93.72 E-value=0.15 Score=52.00 Aligned_cols=128 Identities=9% Similarity=0.025 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHH-hccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhcccc
Q 048705 92 AQEALKWGTDYFL-KATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSAN 170 (487)
Q Consensus 92 iLde~kwg~d~ll-km~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~D 170 (487)
+..|+.=-+.|.+ ++.++.|+||..++. |. .|... ..| ..-..+.++.++|.|+++++ +
T Consensus 11 l~~~~~~~l~fw~~~~~D~~GGf~~~l~~---dg----~~~~~-~~k----------~l~~n~r~i~~~a~a~~~~g--~ 70 (402)
T 3gt5_A 11 LRTHISDTMAFYHPRCIDSAGGFFHYFRD---DG----SIYNA-THR----------HLVSSTRFVFNYAMAYLQFG--T 70 (402)
T ss_dssp HHHHHHHHHHHHTTTTBCTTSSBCCEECT---TS----CEEES-SEE----------EHHHHHHHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHHHHhcCCCCCcCeeeEECC---CC----CCCCC-Cch----------hHHHHHHHHHHHHHHHHhhC--C
Confidence 5667777788765 677777889877754 11 11111 112 22355899999999999986 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCcccc-CCcccchH--HHHHHHHHHHHcCchhHHHHHHH
Q 048705 171 SQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNF-MDSAFQDE--LIWAAAWLFKATNRQSYMKYVVD 247 (487)
Q Consensus 171 ~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~-~d~~~~De--~~wAA~~Ly~aTg~~~Y~~~~~~ 247 (487)
| .+++.|+++.+|..++ .+.+. ..++|-+...--+- ......|. +++|.++ |.+||++.|++.+++
T Consensus 71 ~----~~l~~A~~~~~fl~~~--~~d~~----~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~ 139 (402)
T 3gt5_A 71 A----EYLDAVHHGLSYVRDV--HRNPA----TGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAREWMDE 139 (402)
T ss_dssp H----HHHHHHHHHHHHHHHT--TBCTT----TSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHHHHHHH
T ss_pred h----HHHHHHHHHHHHHHHh--CccCC----CCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhHHHHHHH
Confidence 4 6789999999999885 11111 12333221000000 00111233 3578899 888999999999987
Q ss_pred hhh
Q 048705 248 NIH 250 (487)
Q Consensus 248 ~~~ 250 (487)
...
T Consensus 140 l~~ 142 (402)
T 3gt5_A 140 TWC 142 (402)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 17
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=93.23 E-value=1.3 Score=44.72 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHH---HHHHHHcCchhHHHHHHHhhh
Q 048705 176 ILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAA---AWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 176 ~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA---~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
++++.|+++.+++.++|.. . ..+|+.. ..+ ....+.|.++.+. ++|++.||+++|++.+.+...
T Consensus 107 ~yl~~a~~la~~l~~~~r~---~----~G~fw~~-~~~---~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~ 173 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGTLNRT---S----EGGFWHK-DGY---PYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQES 173 (373)
T ss_dssp HHHHHHHHHHGGGGTSCBC---T----TSCBCSC-TTS---TTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC---C----CCCeecc-CCC---CCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 5788888888888666511 1 1234322 222 3455678876655 688899999999999887543
No 18
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=92.98 E-value=7.5 Score=39.21 Aligned_cols=113 Identities=9% Similarity=0.059 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCceeeEEeCCCCC-CCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhcc
Q 048705 90 KNAQEALKWGTDYFLKATSVPGKVIAQVGEPNA-DHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKS 168 (487)
Q Consensus 90 pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~-dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~ 168 (487)
++|.+.|+-.++-|+++...+|.|-.+.-++.. |. ....++-+ ..|-+..+|..++++.+
T Consensus 25 ~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~--------k~~~~W~W----------t~G~~~~gl~~~ye~Tg- 85 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDT--------KGWAGWEW----------THGVGLYGIYQYYQQTG- 85 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECS--------SSTTSCSH----------HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhccCccccccccCCccccccC--------CCCcCccc----------cHHHHHHHHHHHHHHHC-
Confidence 456666677777888888777777666543211 11 11122222 12567788888888886
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchH--HHHHHHHHHHHcCchhHHHHHH
Q 048705 169 ANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDE--LIWAAAWLFKATNRQSYMKYVV 246 (487)
Q Consensus 169 ~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De--~~wAA~~Ly~aTg~~~Y~~~~~ 246 (487)
|+ ++++.|++.++......+... + .|+ .+.+.++||+.||+++|++.+.
T Consensus 86 -d~----~y~~~a~~~~~~~~~~~~~~~-n-----------------------~D~~~~~~~l~~lY~~Tgd~~Yl~~a~ 136 (382)
T 3pmm_A 86 -DI----EMRDIIDRWFADRFAEGATTK-N-----------------------VNTMAPFLTLAYRFEETGRMAYLPWLE 136 (382)
T ss_dssp -CH----HHHHHHHHHHHHHHHHCCCCC-C-----------------------TTTTTTHHHHHHHHHHHCCGGGHHHHH
T ss_pred -CH----HHHHHHHHHHHHHHcCCCCcC-c-----------------------ccchHHHHHHHHHHHHhCCHHHHHHHH
Confidence 45 455555554443332211100 0 111 2346799999999999999988
Q ss_pred Hhhh
Q 048705 247 DNIH 250 (487)
Q Consensus 247 ~~~~ 250 (487)
....
T Consensus 137 ~~ad 140 (382)
T 3pmm_A 137 SWAE 140 (382)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 19
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.92 E-value=0.79 Score=47.52 Aligned_cols=97 Identities=9% Similarity=-0.018 Sum_probs=67.8
Q ss_pred hHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCC
Q 048705 67 MAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTN 146 (487)
Q Consensus 67 ~a~t~~~L~~a~~e~~~~~~~~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~ 146 (487)
.++.+.-|+-.+...|... ++.+++++.++=-++.|++.|+++| ++++|=+. |+ . |.
T Consensus 268 nGW~~~gl~~~l~~lp~~~-~~r~~l~~~~~~~a~~l~~~Q~~~G-~W~~vld~---------~~---~----y~----- 324 (445)
T 3k11_A 268 NGWALLTACELLDVLPEDY-PQRPKVMDYFRAHVRGVTALQSGEG-FWHQLLDC---------ND---S----YL----- 324 (445)
T ss_dssp HHHHHHHHHHHHHHSCTTC-TTHHHHHHHHHHHHHHHHTTCCTTS-CEESBTTC---------TT---S----CE-----
T ss_pred chHHHHHHHHHHHhccccc-ccHHHHHHHHHHHHHHHHHhCCCCC-chhhccCC---------CC---C----CC-----
Confidence 4444444444444455433 5678899999999999999998766 77776441 11 1 11
Q ss_pred CCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHc
Q 048705 147 PGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQY 191 (487)
Q Consensus 147 pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~ 191 (487)
-|++++.+|.+|+.+.+. .-.|+ ++++..|+++|+.+.++
T Consensus 325 -EsSaTAmfaygllkgvr~-G~Ld~---~~Y~~~A~ka~~~L~~~ 364 (445)
T 3k11_A 325 -ETSATAIYVYCLAHAINK-GWIDA---IAYGPVAQLGWHAVAGK 364 (445)
T ss_dssp -EHHHHHHHHHHHHHHHHH-TSSCH---HHHHHHHHHHHHHHHTT
T ss_pred -CccHHHHHHHHHHHHHHc-CCCCH---HHHHHHHHHHHHHHHHh
Confidence 257889999999998874 22353 47999999999999875
No 20
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=91.73 E-value=1.1 Score=45.41 Aligned_cols=129 Identities=13% Similarity=0.031 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHH-hccCC-CceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhh--c
Q 048705 92 AQEALKWGTDYFL-KATSV-PGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVF--K 167 (487)
Q Consensus 92 iLde~kwg~d~ll-km~~~-~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf--~ 167 (487)
+..|+.=.+.+++ ++.+. .|+|+..+.. |. .|-. .++. .-..+.++.++|.|++++ .
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~---dg----~~~~--~~k~----------l~~nar~l~~~a~a~~~~~~~ 75 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREHGGFFTCLGR---DG----RVYD--DLKY----------VWLQGRQVWMYCRLYRKLERF 75 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTTSSBCCCBCT---TS----CBSC--CCEE----------HHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhhccCCCCCCCCEeeEECC---CC----CCCC--Cccc----------hhhhHHHHHHHHHHHHHhccc
Confidence 4445555677777 67764 5778777753 21 1211 1121 234578899999999988 2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCC-CCccCCCCcc-c-cCCcccch--HHHHHHHHHHHHcCchhHH
Q 048705 168 SANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVC-PYYCDFDGYM-N-FMDSAFQD--ELIWAAAWLFKATNRQSYM 242 (487)
Q Consensus 168 ~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~-~~Y~s~~~y~-~-~~d~~~~D--e~~wAA~~Ly~aTg~~~Y~ 242 (487)
. +| ++++.|++..+|..++= +... .. +||.+...-+ + -......| -++||.++||++||+..|+
T Consensus 76 ~-~~----~~l~~A~~~~~fl~~~~--~d~~----gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~ 144 (402)
T 1fp3_A 76 H-RP----ELLDAAKAGGEFLLRHA--RVAP----PEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQ 144 (402)
T ss_dssp C-CH----HHHHHHHHHHHHHHHHT--BSST----TSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred C-CH----HHHHHHHHHHHHHHHhc--cCcC----CCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHH
Confidence 2 34 68999999999999861 2111 11 3443311100 0 00111223 3578999999999999999
Q ss_pred HHHHHhhh
Q 048705 243 KYVVDNIH 250 (487)
Q Consensus 243 ~~~~~~~~ 250 (487)
+.+.+...
T Consensus 145 ~~A~~l~~ 152 (402)
T 1fp3_A 145 SEAVDMMD 152 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877653
No 21
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=91.03 E-value=0.81 Score=46.72 Aligned_cols=128 Identities=16% Similarity=0.117 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhcc
Q 048705 89 QKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKS 168 (487)
Q Consensus 89 ~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~ 168 (487)
-++.++.+.=.+++|+.--.+.+++....+.. +.| .+.++ .|+ +.....+|+-|++++.
T Consensus 132 ~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~-------~~~----~~~~~-iID--------~~mni~~L~~A~~~~g- 190 (397)
T 2zzr_A 132 DVKALEATIKAADKLMERYQEKGGFIQAWGEL-------GYK----EHYRL-IID--------CLLNIQLLFFAYEQTG- 190 (397)
T ss_dssp CHHHHHHHHHHHHHHHTTEETTTTEECCSSST-------TCG----GGCEE-ETT--------HHHHTHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHHhCcCCCEEEecccC-------CCC----CCCce-eec--------hHhHHHHHHHHHHHhC-
Confidence 36688888888899876544444433222210 111 12222 343 2456889999999997
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHc--c--CC-CCCCC--CCCCCCCc-cCCCCccccCCcccchH---------HHHHHHH
Q 048705 169 ANSQYSKILLQRASQVFQFADQY--Q--GS-YNTSV--GSGVCPYY-CDFDGYMNFMDSAFQDE---------LIWAAAW 231 (487)
Q Consensus 169 ~D~~~A~~~l~~A~~~y~~a~~~--p--~~-~~~~~--~~~~~~~Y-~s~~~y~~~~d~~~~De---------~~wAA~~ 231 (487)
||+|.+ .|++..++..++ + +. |+... +....+.. ...-+| .|| +++|.++
T Consensus 191 -d~~y~~----~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy--------~dds~WaRGqAw~i~gl~~ 257 (397)
T 2zzr_A 191 -DEKYRQ----VAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGY--------SDESSWARGQAWGIYGIPL 257 (397)
T ss_dssp -CHHHHH----HHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSS--------STTSCBHHHHHHHHHHHHH
T ss_pred -CHHHHH----HHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCccccc--------CcchhhHHHHHHHHHHHHH
Confidence 576554 555544554544 1 11 11100 00000000 001233 444 4678899
Q ss_pred HHHHcCchhHHHHHHHhhh
Q 048705 232 LFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 232 Ly~aTg~~~Y~~~~~~~~~ 250 (487)
||++|++.+||+.+++...
T Consensus 258 lY~~T~d~~yL~~A~~la~ 276 (397)
T 2zzr_A 258 SYRKMKDYQQIILFKGMTN 276 (397)
T ss_dssp HHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHH
Confidence 9999999999999987654
No 22
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=90.35 E-value=7.4 Score=38.94 Aligned_cols=74 Identities=11% Similarity=0.033 Sum_probs=48.4
Q ss_pred HHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchH--HHHHHH
Q 048705 153 AEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDE--LIWAAA 230 (487)
Q Consensus 153 ~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De--~~wAA~ 230 (487)
|.+..+|+.++++.+ |+ ++++.|++..++.....+. .. |.. + . .|+ +.++.+
T Consensus 44 G~~~~gl~~~y~~tg--d~----~y~~~a~~~~~~~~~~~g~--------l~--~~~-~------~---lDd~~~g~~ll 97 (373)
T 1nc5_A 44 GVFLCGVLRLWEATG--EK----RYFEYAKAYADLLIDDNGN--------LL--FRR-D------E---LDAIQAGLILF 97 (373)
T ss_dssp HHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHBCTTCC--------BC--CCT-T------C---GGGTGGGGGHH
T ss_pred HHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHhCCCCc--------cc--CCC-C------C---cchHHHHHHHH
Confidence 667788999999886 45 5666677766664321111 00 111 1 0 122 467899
Q ss_pred HHHHHcCchhHHHHHHHhhhhh
Q 048705 231 WLFKATNRQSYMKYVVDNIHYL 252 (487)
Q Consensus 231 ~Ly~aTg~~~Y~~~~~~~~~~~ 252 (487)
+||++||+++|++.+......+
T Consensus 98 ~lY~~Tgd~~yl~~a~~la~~l 119 (373)
T 1nc5_A 98 PLYEQTKDERYVKAAKRLRSLY 119 (373)
T ss_dssp HHHHHHCCHHHHHHHHHHHGGG
T ss_pred HHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999998876543
No 23
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=89.58 E-value=1.2 Score=45.23 Aligned_cols=128 Identities=12% Similarity=0.088 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhccc
Q 048705 90 KNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSA 169 (487)
Q Consensus 90 pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~ 169 (487)
++.++.+.=.+++|+.--.+.+++... |+.-.+.....+ ..|++ .....+|+-|++++.
T Consensus 107 ~~~~~~~~~aA~~L~~r~~~~~g~i~s----------w~~~~~~~~~~~-~iID~--------mmni~~L~~A~~~~g-- 165 (377)
T 2ahf_A 107 ESARKLALDAADVLMRRWRADAGIIQA----------WGPKGDPENGGR-IIIDC--------LLNLPLLLWAGEQTG-- 165 (377)
T ss_dssp HHHHHHHHHHHHHHHTTEETTTTEECC----------BSSTTCTTTTTE-EEGGG--------GGGHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEe----------ccCCCCCCCCce-EEech--------HHHHHHHHHHHHHhC--
Confidence 567777888888888765554333222 331111111222 34542 455889999999997
Q ss_pred cHHHHHHHHHHHHHHHHHHHHc--c--CC-CCCCC--CCCCCCCc-cCCCCccccCCcccchH---------HHHHHHHH
Q 048705 170 NSQYSKILLQRASQVFQFADQY--Q--GS-YNTSV--GSGVCPYY-CDFDGYMNFMDSAFQDE---------LIWAAAWL 232 (487)
Q Consensus 170 D~~~A~~~l~~A~~~y~~a~~~--p--~~-~~~~~--~~~~~~~Y-~s~~~y~~~~d~~~~De---------~~wAA~~L 232 (487)
||+| ++.|++..++..++ + +. ++... +....++. ...-+| .|| ++++.++|
T Consensus 166 d~~y----~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~--------~dds~WaRGqAw~i~gl~~l 233 (377)
T 2ahf_A 166 DPEY----RRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGN--------TDGSTWTRGQAWGIYGFALN 233 (377)
T ss_dssp CTHH----HHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSS--------STTSCBHHHHHHHHHHHHHH
T ss_pred CHHH----HHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCc--------CCcchhHHHHHHHHHHHHHH
Confidence 5654 55555555555554 1 11 11100 00000000 000233 444 46788999
Q ss_pred HHHcCchhHHHHHHHhhh
Q 048705 233 FKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 233 y~aTg~~~Y~~~~~~~~~ 250 (487)
|++|++.+||+.+++...
T Consensus 234 y~~T~d~~yL~~A~~la~ 251 (377)
T 2ahf_A 234 SRYLGNADLLETAKRMAR 251 (377)
T ss_dssp HHHHTCHHHHHHHHHHHH
T ss_pred HHHHCChHHHHHHHHHHH
Confidence 999999999999987654
No 24
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=89.34 E-value=5.1 Score=40.47 Aligned_cols=29 Identities=3% Similarity=0.058 Sum_probs=22.6
Q ss_pred chHH-HHHHHHHHHHcCchhHHHHHHHhhh
Q 048705 222 QDEL-IWAAAWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 222 ~De~-~wAA~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
..-+ .-+...+|+.||+++|++.++++..
T Consensus 69 t~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~ 98 (382)
T 3pmm_A 69 THGVGLYGIYQYYQQTGDIEMRDIIDRWFA 98 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 3344 4477789999999999999988664
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=86.94 E-value=2.2 Score=42.99 Aligned_cols=83 Identities=10% Similarity=-0.041 Sum_probs=49.8
Q ss_pred HHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHH-HHc---c---CCCCCCCCCCCCCCccCCCCccccCCcc----c
Q 048705 153 AEIAAALAASSIVFKSANSQYSKILLQRASQVFQFA-DQY---Q---GSYNTSVGSGVCPYYCDFDGYMNFMDSA----F 221 (487)
Q Consensus 153 ~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a-~~~---p---~~~~~~~~~~~~~~Y~s~~~y~~~~d~~----~ 221 (487)
.+.+-.|+.+++++. |+ ++++.|+++++++ .++ + +.+...... ..+ -.+ ..|.. .
T Consensus 250 ie~~wlL~~a~~~~~--~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~-g~~-----~~~--l~d~~~~~W~ 315 (402)
T 1fp3_A 250 LEAGWFLLRHSSRSG--DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDAD-GLC-----PTQ--LEWAMKLWWP 315 (402)
T ss_dssp HHHHHHHHHHHHHTT--CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETT-SCC-----CSS--TTTTCEEHHH
T ss_pred HHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCC-CCc-----ccc--CcCCCcCcHH
Confidence 345556888888885 45 5778888888888 554 1 121110000 000 000 00100 0
Q ss_pred chHHHHHHHHHHHHcCchhHHHHHHHhh
Q 048705 222 QDELIWAAAWLFKATNRQSYMKYVVDNI 249 (487)
Q Consensus 222 ~De~~wAA~~Ly~aTg~~~Y~~~~~~~~ 249 (487)
.-|.+.|++.||++||+.+|++.+++..
T Consensus 316 qaea~~a~l~ly~~tgd~~yl~~a~~~~ 343 (402)
T 1fp3_A 316 HSEAMIAFLMGYSESGDPALLRLFYQVA 343 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 1277999999999999999999887754
No 26
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=85.19 E-value=15 Score=37.89 Aligned_cols=64 Identities=9% Similarity=0.104 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHH---HHHHHHHcCchh--HHHHHHHhh
Q 048705 176 ILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWA---AAWLFKATNRQS--YMKYVVDNI 249 (487)
Q Consensus 176 ~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wA---A~~Ly~aTg~~~--Y~~~~~~~~ 249 (487)
++++.|+++.+++...--+.. ..+|+.. . +|.+.-|.|.++-+ -+++.+.||+++ |++.+....
T Consensus 165 ~yl~~a~~~ad~L~~~~pRt~------~Ggf~h~-~---~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~ 233 (445)
T 3k11_A 165 PVDGLIQNYFDFIINKEYRLA------DGTFARN-R---PQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQF 233 (445)
T ss_dssp CCHHHHHHHHHHHHHTSCBCT------TCCBCBC-S---SSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCC------CCceeec-C---CCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHH
Confidence 778888888888887521111 1233322 1 22455667876444 467788899999 999988754
No 27
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=83.14 E-value=3.1 Score=42.40 Aligned_cols=124 Identities=7% Similarity=-0.064 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhccccH
Q 048705 92 AQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSANS 171 (487)
Q Consensus 92 iLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~D~ 171 (487)
+.+++.=-++|.+++.+.. +| +.+.. + |. |... .+|. .-+.+.++.++|.|++ ++ +|
T Consensus 13 l~~~~~~ll~f~~~~~d~~-GF-~~ld~---~---g~-~~~~-~~k~----------~~~nar~i~~~a~a~~-~g--~~ 69 (421)
T 2zbl_A 13 LEQETDRIFNFGKNAVVPT-GF-GWLGN---K---GQ-IKEE-MGTH----------LWITARMLHVYSVAAS-MG--RP 69 (421)
T ss_dssp HHHHHHHHHHHHGGGEETT-EE-CCBCT---T---SC-BCGG-GCEE----------HHHHHHHHHHHHHHHH-TT--CT
T ss_pred HHHHHHHHHHHHHhCcCCC-Cc-ceECC---C---CC-CCCC-chhh----------HHHHHHHHHHHHHHHH-cC--Ch
Confidence 5667777777888887666 44 23322 1 22 1111 1122 2355899999999987 65 34
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCcc-ccCCcccch--HHHHHHHHHHHHcCchhHHHHHHHh
Q 048705 172 QYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYM-NFMDSAFQD--ELIWAAAWLFKATNRQSYMKYVVDN 248 (487)
Q Consensus 172 ~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~-~~~d~~~~D--e~~wAA~~Ly~aTg~~~Y~~~~~~~ 248 (487)
++++.|++..+|..++ .+... ..+||-+...-+ +-.+....| .+++|.++ |++||++.|++.+++.
T Consensus 70 ----~~l~~A~~~~~fl~~~--~~D~~----~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~~ 138 (421)
T 2zbl_A 70 ----GAYDLVDHGIKAMNGA--LRDKK----YGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKLLDYT 138 (421)
T ss_dssp ----THHHHHHHHHHHHTTT--TBCTT----TSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHh--ccCcC----CCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHHHHHH
Confidence 5788999999999886 33321 134553321100 000111122 46789999 9999999999988765
Q ss_pred h
Q 048705 249 I 249 (487)
Q Consensus 249 ~ 249 (487)
.
T Consensus 139 ~ 139 (421)
T 2zbl_A 139 I 139 (421)
T ss_dssp H
T ss_pred H
Confidence 4
No 28
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=78.25 E-value=22 Score=36.98 Aligned_cols=123 Identities=14% Similarity=0.068 Sum_probs=72.3
Q ss_pred cccccchHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHhccCCCc--eeeEE---------------eCCCC-C
Q 048705 61 IKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPG--KVIAQ---------------VGEPN-A 122 (487)
Q Consensus 61 ~Ky~~~~a~t~~~L~~a~~e~~~~~~~~~pdiLde~kwg~d~llkm~~~~g--~~y~~---------------vg~~~-~ 122 (487)
.||-.-..-..-.|+|.|.+......---+..++-++--+++|..+|..++ +.|.- .|.+. .
T Consensus 175 ~KyElDSla~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~ 254 (489)
T 2p0v_A 175 RKWEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKP 254 (489)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCC
T ss_pred ccchhhhhHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCC
Confidence 344433333333466666654332221112566788888999999887664 33332 11111 0
Q ss_pred CCCCCC--CCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhccc--cHHHHHHHHHHHHHHHHHHHHc
Q 048705 123 DHNCWE--RPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSA--NSQYSKILLQRASQVFQFADQY 191 (487)
Q Consensus 123 dh~~w~--~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~--D~~~A~~~l~~A~~~y~~a~~~ 191 (487)
-...|. ||.+|..... |.+. ..+.++++|-.++.+.+.+ |+++|++|.+.|+++-+-.+++
T Consensus 255 tGLi~S~fRPSDDa~~yg-~~ip-------SN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 255 VGLIASAFRPSDDATTFQ-FLVP-------SNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp SSCCCCSBCTTSCBCSSS-EEHH-------HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeCCCCCCCcchhcC-cchH-------HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 123343 5665553332 3331 2356788888888887654 6789999999999998887775
No 29
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=78.04 E-value=12 Score=38.10 Aligned_cols=117 Identities=17% Similarity=0.201 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhc
Q 048705 88 EQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFK 167 (487)
Q Consensus 88 ~~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~ 167 (487)
+.+.+++.|+=.++|+++.+.++|. |-.......++.+... -|+ .-++-++..+++++.
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~~g~--------------wp~~~~~~~~~~~~wC----hG~---~Gi~~~l~~~~~~~~ 306 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFPSGN--------------YPPCIGDNRDLLVHWC----HGA---PGVIYMLIQAYKVFR 306 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCTTSC--------------CCSBTTCCCCCCCSSS----SSH---HHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHHHhhccCCC--------------CCCCCCcccCcccccc----CCc---HHHHHHHHHHHHHcC
Confidence 3567888899999999998764442 2110011112222222 132 345666777888886
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchhHHHHHHH
Q 048705 168 SANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVD 247 (487)
Q Consensus 168 ~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~ 247 (487)
|+++-+.+.++++..|+.. ....+ + ..| .| .-=.+..-..||+.|++++|++.+..
T Consensus 307 --~~~~~~~a~~~~~~~~~~g-----~~~~~-~-~lC------hG---------~aG~~~~ll~~~~~t~~~~~~~~A~~ 362 (411)
T 3e6u_A 307 --EEKYLCDAYQCADVIWQYG-----LLKKG-Y-GLC------HG---------SAGNAYAFLTLYNLTQDMKYLYRACK 362 (411)
T ss_dssp --CHHHHHHHHHHHHHHHHHC-----SBTTC-S-CST------TS---------HHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhcC-----ccCCC-C-cee------cC---------hHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 6777777777777776642 11111 0 011 11 12246788999999999999998876
Q ss_pred hh
Q 048705 248 NI 249 (487)
Q Consensus 248 ~~ 249 (487)
..
T Consensus 363 ~~ 364 (411)
T 3e6u_A 363 FA 364 (411)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 30
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=73.64 E-value=24 Score=34.85 Aligned_cols=84 Identities=8% Similarity=0.064 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhh---h
Q 048705 90 KNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIV---F 166 (487)
Q Consensus 90 pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~v---f 166 (487)
+...+-++=|++|||.||-++|+.= .+| |+.......+-.. =|+++.+.-+|+....- |
T Consensus 93 ~~y~~Ai~Rgl~wlL~mQ~~nGGWp------qFd------pd~~~Yl~~IpFn------DDvtarvLelL~~~~~~~~~~ 154 (332)
T 1gxm_A 93 TKYRDAVRKAANFLVNSQYSTGALP------QFY------PLKGGYSDHATFN------DNGMAYALTVLDFAANKRAPF 154 (332)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSCCB------SEE------SCCSGGGGSEECG------GGHHHHHHHHHHHHHTTCTTS
T ss_pred hHHHHHHHHHHHHHHhccCCCCCcc------ccC------CCcccccccCCcc------hHHHHHHHHHHHHHHhccCCc
Confidence 6788999999999999999887531 111 1111111112121 27899999998887541 2
Q ss_pred c---cccHHHHHHHHHHHHHHHHHHHHcc
Q 048705 167 K---SANSQYSKILLQRASQVFQFADQYQ 192 (487)
Q Consensus 167 ~---~~D~~~A~~~l~~A~~~y~~a~~~p 192 (487)
. -.|++. .+...+.+++-+|+.+.+
T Consensus 155 ~~~~~~~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 155 DTDVFSDNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp CSTTSCHHHH-HHHHHHHHHHHHHHHHHS
T ss_pred cccccccchh-hhhHHHHHHHHHHHHHhh
Confidence 1 125566 788889999999999874
No 31
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=70.14 E-value=13 Score=37.83 Aligned_cols=150 Identities=9% Similarity=0.024 Sum_probs=80.5
Q ss_pred cccccchHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHhcc-CCC-ceeeEEeCCCCCCCCCCCCCCCCCCCce
Q 048705 61 IKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKAT-SVP-GKVIAQVGEPNADHNCWERPEDMDTPRT 138 (487)
Q Consensus 61 ~Ky~~~~a~t~~~L~~a~~e~~~~~~~~~pdiLde~kwg~d~llkm~-~~~-g~~y~~vg~~~~dh~~w~~Pe~~~~~R~ 138 (487)
-|.+...+--+..++.++. + +.|+.++-++-+++||++-. +.. |++|..|.. + |..|. ...
T Consensus 47 ~k~~~~nar~i~~~a~a~~-~------g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~---d---g~~~~----~k~ 109 (421)
T 2zbl_A 47 GTHLWITARMLHVYSVAAS-M------GRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND---Q---GVVDA----SKQ 109 (421)
T ss_dssp CEEHHHHHHHHHHHHHHHH-T------TCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET---T---EEEEC----CEE
T ss_pred hhhHHHHHHHHHHHHHHHH-c------CChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC---C---CCcCC----chh
Confidence 4665444444444443332 2 33678999999999998764 433 778866621 1 22222 111
Q ss_pred eeecCCCCCCcHHHHHHHHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCC-c-ccc
Q 048705 139 SYVVNTTNPGSEVSAEIAAALAASSIVFKSANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDG-Y-MNF 216 (487)
Q Consensus 139 ~~~~~~~~pgs~~~~~~aAalA~as~vf~~~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~-y-~~~ 216 (487)
+| .-+.++.+++. +++.. ++ +.++.|+++.++.+++- ..+. ..+||.+... . +.-
T Consensus 110 ly----------d~Af~i~al~~-~~~tg--~~----~~l~~a~~~~~~l~~~~--~d~~----~Ggf~~~~d~d~~~~~ 166 (421)
T 2zbl_A 110 GY----------QHFFALLGAAS-AVTTG--HP----EARKLLDYTIEVIEKYF--WSEE----EQMCLESWDEAFSQTE 166 (421)
T ss_dssp HH----------HHHHHHHHHHH-HHTTT--CT----THHHHHHHHHHHHHHHT--EETT----TTEECCEECTTSCSBC
T ss_pred HH----------HHHHHHHHHHH-HHHhC--Cc----cHHHHHHHHHHHHHHHh--ccCC----CCCeeeeecCCCCccc
Confidence 11 12445556665 55544 34 56788888888888851 1110 1223322000 0 000
Q ss_pred CCcccchH--HHHHHHHHHHHcCchhHHHHHHHhhh
Q 048705 217 MDSAFQDE--LIWAAAWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 217 ~d~~~~De--~~wAA~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
+-..+... ++-|.+.|+++||+.+|++.+++...
T Consensus 167 ~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~ 202 (421)
T 2zbl_A 167 DYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIAS 202 (421)
T ss_dssp SCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 00111232 36788899999999999988776554
No 32
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=65.11 E-value=56 Score=32.74 Aligned_cols=23 Identities=17% Similarity=0.133 Sum_probs=20.0
Q ss_pred HHHHHHHHcCchhHHHHHHHhhh
Q 048705 228 AAAWLFKATNRQSYMKYVVDNIH 250 (487)
Q Consensus 228 AA~~Ly~aTg~~~Y~~~~~~~~~ 250 (487)
..+.+|+.||+++|++.+.....
T Consensus 96 s~~~~y~ltg~~~~~~~~~~aA~ 118 (377)
T 2ahf_A 96 SAKAQWIVEKDESARKLALDAAD 118 (377)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHH
Confidence 78889999999999998887654
No 33
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=59.45 E-value=80 Score=31.82 Aligned_cols=25 Identities=0% Similarity=-0.032 Sum_probs=20.5
Q ss_pred HHHHHHHHHcCchhHHHHHHHhhhh
Q 048705 227 WAAAWLFKATNRQSYMKYVVDNIHY 251 (487)
Q Consensus 227 wAA~~Ly~aTg~~~Y~~~~~~~~~~ 251 (487)
...+.+|+.||+++|++.+......
T Consensus 121 ~s~~~~y~ltg~~~~~~~~~~aA~~ 145 (397)
T 2zzr_A 121 PSCTAEYRINGDVKALEATIKAADK 145 (397)
T ss_dssp TTHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4678899999999999988776543
No 34
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=59.01 E-value=42 Score=34.01 Aligned_cols=86 Identities=14% Similarity=0.100 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCCCCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhh---
Q 048705 89 QKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIV--- 165 (487)
Q Consensus 89 ~pdiLde~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~v--- 165 (487)
-+...+-++=|++|||.||-++|+. +.+| |+.......+-.. =|+++.+.-+|+....-
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~nGGW------pqFd------pdn~~y~~~IpFn------DDvt~rvle~L~~~~~~~~~ 231 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFPNGGW------PQVW------PLEGGYHDAITYN------DDALVHVAELLSDIAAGRDG 231 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTTSCC------BSBS------SCCCGGGGSEECG------GGHHHHHHHHHHHHHHTCTT
T ss_pred cHHHHHHHHHHHHHHHHccCCCCCC------cCcC------ccccccccCCCcC------cHHHHHHHHHHHHHHhccCc
Confidence 3678899999999999999988753 1111 1121111112121 27888888888887652
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHHcc
Q 048705 166 FKSANSQYSKILLQRASQVFQFADQYQ 192 (487)
Q Consensus 166 f~~~D~~~A~~~l~~A~~~y~~a~~~p 192 (487)
|.-+|+++..+...+.+++-+|+.+.+
T Consensus 232 ~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 232 FGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 333488888999999999999999875
No 35
>2kmg_A KLCA; ARDB, spectroscopy, anti-restriction, plasmid, gene regulation; NMR {Bordetella pertussis}
Probab=42.78 E-value=16 Score=31.45 Aligned_cols=87 Identities=14% Similarity=0.181 Sum_probs=52.0
Q ss_pred HHHHhccCC-Ccee--eEEeCCCCCCCCCCCCCCCCCCCceeeecCCC----CCCcHHHHHHHHHHHHhhhhhccccHHH
Q 048705 101 DYFLKATSV-PGKV--IAQVGEPNADHNCWERPEDMDTPRTSYVVNTT----NPGSEVSAEIAAALAASSIVFKSANSQY 173 (487)
Q Consensus 101 d~llkm~~~-~g~~--y~~vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~----~pgs~~~~~~aAalA~as~vf~~~D~~~ 173 (487)
.|+-|+-++ +|++ |.++.++ ..+..|+. ..|....++.+ .-+++++|-++..++...+.++.-+.+-
T Consensus 40 ~~~~rl~~dY~GG~W~f~~lsnG----g~ym~P~~--~~~~~l~~~~N~f~~evSAdAaGIi~tL~~ls~~a~~~~~~~~ 113 (142)
T 2kmg_A 40 AWMRRLCERYNGAYWHYYALSDG----GFYMAPDL--AGRLEIEVNGNGFRGELSADAAGIVATLFALGQLAAEIADTDA 113 (142)
T ss_dssp HHHHHHCTTCCCCCCEEEEETTS----CEEEECCC--CSCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCccCCCCeeEEEEecCC----eeEecCCC--CCcEEEEecCCCCCceECHHHHHHHHHHHHHHHHHHhcccccc
Confidence 466677654 6665 4466654 33455654 23443332211 1246888888888888888887653112
Q ss_pred HHHHHHHHHHHHHHHHHccC
Q 048705 174 SKILLQRASQVFQFADQYQG 193 (487)
Q Consensus 174 A~~~l~~A~~~y~~a~~~p~ 193 (487)
.+.+.++--++.+||.+||.
T Consensus 114 ~d~l~~~y~~Lrdya~~HpE 133 (142)
T 2kmg_A 114 ADALIDRYHFLRGFAAGHPE 133 (142)
T ss_dssp TTTTHHHHHHHHHHGGGSTT
T ss_pred cHHHHHHHHHHHHHHHhCcc
Confidence 23444455799999999984
No 36
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=39.93 E-value=2.9e+02 Score=28.33 Aligned_cols=122 Identities=15% Similarity=0.082 Sum_probs=67.1
Q ss_pred ccccchHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHhccCCCc-eee--EEeCCCC--------------CCC
Q 048705 62 KFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPG-KVI--AQVGEPN--------------ADH 124 (487)
Q Consensus 62 Ky~~~~a~t~~~L~~a~~e~~~~~~~~~pdiLde~kwg~d~llkm~~~~g-~~y--~~vg~~~--------------~dh 124 (487)
||-+-+--.--.|++.|.+....-.---++.++-++=-++=+..+|..+| .-| .+..+.. .-.
T Consensus 159 KyElDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tG 238 (463)
T 3p2c_A 159 KWEIDSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVG 238 (463)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSS
T ss_pred ecHhhhhhHHHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCC
Confidence 56555444445666666655332110011444444444555556665443 111 1111110 122
Q ss_pred CCCC--CCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhccc--cHHHHHHHHHHHHHHHHHHHHc
Q 048705 125 NCWE--RPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSA--NSQYSKILLQRASQVFQFADQY 191 (487)
Q Consensus 125 ~~w~--~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~--D~~~A~~~l~~A~~~y~~a~~~ 191 (487)
..|. ||.+|...=. |.|. .-..++.+|-.++.+++.+ |.++|++|.+.|+++-+..++|
T Consensus 239 li~S~FRPSDDa~~~~-~~iP-------sN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI~k~ 301 (463)
T 3p2c_A 239 LIVSSFRPSDDATTLQ-FLVP-------SNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQEVETALKKY 301 (463)
T ss_dssp CCBCSBCTTSCBCSSS-EEHH-------HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCCCCcccccC-CCcH-------HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 3343 5665533322 4442 2356778888888887754 7889999999999999988886
No 37
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=33.54 E-value=30 Score=35.63 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCchhHHHHHHHhh
Q 048705 225 LIWAAAWLFKATNRQSYMKYVVDNI 249 (487)
Q Consensus 225 ~~wAA~~Ly~aTg~~~Y~~~~~~~~ 249 (487)
++.|.+|||++|++++|++.+....
T Consensus 431 lL~allEL~~atq~~~~l~lA~~~g 455 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEKIG 455 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5789999999999999999887654
No 38
>2wj9_A ARDB, intergenic-region protein; antirestriction, hydrolase inhibitor; 1.62A {Escherichia coli}
Probab=32.45 E-value=82 Score=28.14 Aligned_cols=85 Identities=11% Similarity=0.063 Sum_probs=45.8
Q ss_pred HHHHhccCC-CceeeE--EeCCCCCCCCCCCCCCCC--CCCceeeecCCC----CCCcHHHHHHHHHHHHhhhhhccccH
Q 048705 101 DYFLKATSV-PGKVIA--QVGEPNADHNCWERPEDM--DTPRTSYVVNTT----NPGSEVSAEIAAALAASSIVFKSANS 171 (487)
Q Consensus 101 d~llkm~~~-~g~~y~--~vg~~~~dh~~w~~Pe~~--~~~R~~~~~~~~----~pgs~~~~~~aAalA~as~vf~~~D~ 171 (487)
.|+-|+-++ +|+++. ++.++ ..+..|+.+ ...|+...+..+ .-+++++|-++..+|.....++.-..
T Consensus 79 ~~m~rlc~dY~GG~WeF~~LSNG----G~ymaP~~~~~~~e~~~l~n~~Ngf~~evSAdAAGIiaTL~alshla~~~e~d 154 (181)
T 2wj9_A 79 GWMDRLCENYCGGIWNLYTLNNG----GAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECY 154 (181)
T ss_dssp HHHHHHC---C--CEEEEEETTS----CEEEEEC------CCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHhccccCCCeeEEEEecCC----eeEEecCCCCCCCceEEEEecCCCCCceECHHHHHHHHHHHHHHHHHcccchH
Confidence 466666543 666544 66553 334556532 244654433221 12457888777777777766654333
Q ss_pred HHHHHHHHHHHHHHHHHHHccC
Q 048705 172 QYSKILLQRASQVFQFADQYQG 193 (487)
Q Consensus 172 ~~A~~~l~~A~~~y~~a~~~p~ 193 (487)
.+.++--++-+||.+||.
T Consensus 155 ----~l~e~y~~LRdYA~~HpE 172 (181)
T 2wj9_A 155 ----AMTVHYYRLRDYALQHPE 172 (181)
T ss_dssp ----HHHHHHHHHHHHHHHSTT
T ss_pred ----HHHHHHHHHHHHHHhCcc
Confidence 444444578899999985
No 39
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=27.76 E-value=94 Score=32.14 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=24.2
Q ss_pred cchHHHHHHHHHHHHcCchhHHHHHHHhhhh
Q 048705 221 FQDELIWAAAWLFKATNRQSYMKYVVDNIHY 251 (487)
Q Consensus 221 ~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~~ 251 (487)
.+-|.+=.---|||+|||++|++..-+..+.
T Consensus 371 LRPE~iES~fylyR~TgD~~yr~~gw~~f~a 401 (475)
T 2ri9_A 371 LRPEVIESFYYAHRVTGKEIYRDWVWNAFVA 401 (475)
T ss_dssp SCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3557777778899999999999987665543
No 40
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=27.63 E-value=5.3e+02 Score=27.96 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhccCCCceeeEEeCCCCCCCCCC---CCCCCCCCCceeeecCCCCCCcHHHHHHHHHHHHhhhhhcccc
Q 048705 94 EALKWGTDYFLKATSVPGKVIAQVGEPNADHNCW---ERPEDMDTPRTSYVVNTTNPGSEVSAEIAAALAASSIVFKSAN 170 (487)
Q Consensus 94 de~kwg~d~llkm~~~~g~~y~~vg~~~~dh~~w---~~Pe~~~~~R~~~~~~~~~pgs~~~~~~aAalA~as~vf~~~D 170 (487)
+.++=+++||++||.++|++-.--.+ . ...| ..|.+.- .+. .++ .+..+.|+.+..+|+.....+..+.
T Consensus 481 ~~i~~av~wLls~Q~~DGgw~a~~~~--~-~~~~l~~i~~~e~f-g~~--~~d--~s~v~~Ta~vL~aL~~~~~~~~~~~ 552 (732)
T 1w6k_A 481 ERLCDAVAVLLNMRNPDGGFATYETK--R-GGHLLELLNPSEVF-GDI--MID--YTYVECTSAVMQALKYFHKRFPEHR 552 (732)
T ss_dssp HHHHHHHHHHHTTCCTTSCBCSSSCC--C-SCGGGGGGCCCSSC-SSC--SSC--CCBHHHHHHHHHHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHHhcCCCCCEEeecCC--C-chHHHhhCcchhcc-ccc--ccC--CCcchHHHHHHHHHHHhcccccccc
Confidence 34566789999999999977211000 0 0111 1222110 011 111 1234566666666766554443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcc
Q 048705 171 SQYSKILLQRASQVFQFADQYQ 192 (487)
Q Consensus 171 ~~~A~~~l~~A~~~y~~a~~~p 192 (487)
. .+.....+++-+|+.+++
T Consensus 553 ~---~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 553 A---AEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp H---HHHHHHHHHHHHHHHHHS
T ss_pred c---hhhHHHHHHHHHHHHhhc
Confidence 1 122344566778888875
No 41
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=27.18 E-value=2.1e+02 Score=28.56 Aligned_cols=66 Identities=12% Similarity=0.195 Sum_probs=47.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCccCCCCccccCCcccchHHHHHHHHHHHHcCchhHHHHHHHh
Q 048705 169 ANSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMNFMDSAFQDELIWAAAWLFKATNRQSYMKYVVDN 248 (487)
Q Consensus 169 ~D~~~A~~~l~~A~~~y~~a~~~p~~~~~~~~~~~~~~Y~s~~~y~~~~d~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~ 248 (487)
+.++|+.++.++.+++-+..+++-... .. ...+.|.+.++ .++.-+.|++.|++++|++.+.+.
T Consensus 40 ~~~~~~~~~~~~~~~ll~~~~~~~~~~-~~---~~~~lY~G~~G------------ia~~l~~l~~~t~d~~yl~~a~~~ 103 (411)
T 3e6u_A 40 LTPEFSQRLTNKIRELLQQMERGLKSA-DP---RDGTGYTGWAG------------IAVLYLHLYDVFGDPAYLQLAHGY 103 (411)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHTTTS-CT---TCCCSSSSHHH------------HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcccC-CC---CCCCeeeChHH------------HHHHHHHHHHhcCCHHHHHHHHHH
Confidence 358999999999999988887753221 11 12456655343 478888999999999999998776
Q ss_pred hh
Q 048705 249 IH 250 (487)
Q Consensus 249 ~~ 250 (487)
..
T Consensus 104 l~ 105 (411)
T 3e6u_A 104 VK 105 (411)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 42
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=21.21 E-value=1.4e+02 Score=31.14 Aligned_cols=30 Identities=7% Similarity=0.190 Sum_probs=23.4
Q ss_pred chHHHHHHHHHHHHcCchhHHHHHHHhhhh
Q 048705 222 QDELIWAAAWLFKATNRQSYMKYVVDNIHY 251 (487)
Q Consensus 222 ~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~~ 251 (487)
+=|.+=.---|||+|||++|++..-+..+.
T Consensus 391 RPE~iES~fylyR~TgD~~yre~gw~if~a 420 (503)
T 1hcu_A 391 RPETLESLYYAYRVTGDSKWQDLAWEALSA 420 (503)
T ss_dssp CCHHHHHHHHHHHHHCBHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 447766777899999999999987665443
Done!