BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048707
(114 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 192 bits (488), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 86/113 (76%), Positives = 100/113 (88%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASK 60
MFVSIPKAD +FMKWICH+WS+E C+K LKNCYEALP+NGKVIVAECILPV PD SLA+K
Sbjct: 252 MFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATK 311
Query: 61 QVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVVCSAFSTYIMEFLKK 113
V+HID IMLAH GG+E T+++F+ LAK AGFQGFKV C+AF+TYIMEFLKK
Sbjct: 312 GVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLKK 364
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 164 bits (416), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 92/112 (82%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASK 60
MF +PK D IF+KWICH+WS+E C+K+LKNCY ALP++GKVIVAE ILP PDPS+A+K
Sbjct: 255 MFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATK 314
Query: 61 QVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVVCSAFSTYIMEFLK 112
VIH D +MLA+ GG+E TE++F+ LA A+GF+GFKV AF+TY+MEFLK
Sbjct: 315 VVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 130 bits (328), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/112 (49%), Positives = 77/112 (68%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASK 60
MF +P D I MKWI H+WS++ C +LKNCY+ALP +GKV++ +CILPV P+ + +S+
Sbjct: 253 MFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQ 312
Query: 61 QVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVVCSAFSTYIMEFLK 112
V H+D IMLAH GGRE E++F+ LA+ AGF G K + + +EF K
Sbjct: 313 GVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 115 bits (288), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASK 60
MF S+P+ D + +K +CHNWS+E C++ L NC++AL NGKVI+ E ILP P+ S SK
Sbjct: 261 MFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESK 320
Query: 61 QVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVVCSAFSTY-IMEFLK 112
V +D +M T GGRE TE+ ++ L+K +GF F+V C AF++ +MEF K
Sbjct: 321 LVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 108 bits (270), Expect = 8e-25, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Query: 2 FVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASKQ 61
F S+P+ D +K +CHNWS+E C++ L NC++AL NGKVI+ E ILP P+ S SK
Sbjct: 262 FASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKL 321
Query: 62 VIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVVCSAFSTY-IMEFLK 112
V +D + T GGRE TE+ ++ L+K +GF F+V C AF++ + EF K
Sbjct: 322 VSTLDNLXFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVXEFYK 372
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASK 60
MF SIP AD + +K+I HNW+++ C++ILK C EA+ +GK I+ ++ D
Sbjct: 240 MFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKV-TIIDMVIDKKKDEN 298
Query: 61 QVIHIDCIMLAHTT--GGREMTEQDFKTLAKAAGFQGFKV 98
QV I +M + G+E E+++K L AGFQ +K+
Sbjct: 299 QVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKI 338
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPEN---GKVIVAECILPVLPDPSL 57
MF+S+PKAD + +K + H+W+++ C+KILK C EA+ + GKVIV + ++ D +
Sbjct: 245 MFISVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDEN- 303
Query: 58 ASKQVIHIDCIMLAHTT--GGREMTEQDFKTLAKAAGFQGFKV 98
Q+ I +M + G+E E+++K L AGFQ +K+
Sbjct: 304 ---QLTQIKLLMNVTISCVNGKERNEEEWKKLFIEAGFQDYKI 343
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALP---ENGKVIVAECILPVLPDPSL 57
MF SIP AD + +KW+ H+W++E +KILKN EA+ ++GKVI+ + + D
Sbjct: 245 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 304
Query: 58 ASKQVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVV-CSAFSTYI 107
++ + D +ML G+E T+Q+++ L AGF +K+ S F + I
Sbjct: 305 LTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKITPISGFKSLI 354
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 70.5 bits (171), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALP---ENGKVIVAECILPVLPDPSL 57
MF SIP AD + +KW+ H+W++E +KILKN EA+ ++GKVI+ + + D
Sbjct: 244 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 303
Query: 58 ASKQVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVV-CSAFSTYI 107
++ + D +ML G+E T+Q+++ L AGF +K+ S F + I
Sbjct: 304 LTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKITPISGFKSLI 353
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 70.5 bits (171), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 1 MFVSIPKADVIFMKWICHNWSEEACVKILKNCYEALP---ENGKVIVAECILPVLPDPSL 57
MF SIP AD + +KW+ H+W++E +KILKN EA+ ++GKVI+ + + D
Sbjct: 241 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 300
Query: 58 ASKQVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVV-CSAFSTYI 107
++ + D +ML G+E T+Q+++ L AGF +K+ S F + I
Sbjct: 301 LTELQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKITPISGFKSLI 350
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 67.0 bits (162), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 2 FVSIPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASKQ 61
F SIP AD + +K+I HNW+++ C++ILK C EA+ +GK I V+ D Q
Sbjct: 241 FTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVI-DKKKDENQ 299
Query: 62 VIHIDCIMLAHTT--GGREMTEQDFKTLAKAAGFQGFKV 98
V I + + G+E E+++K L AGFQ +K+
Sbjct: 300 VTQIKLLXDVNXACLNGKERNEEEWKKLFIEAGFQHYKI 338
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 5 IPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASKQVIH 64
+P ADV +K I HNW +E V+IL NC P +G+V+V + ++P D + Q
Sbjct: 245 VPHADVHVLKRILHNWGDEDSVRILTNCRRVXPAHGRVLVIDAVVPEGND----AHQSKE 300
Query: 65 IDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVV 99
D LA T G+E T + + L AAG + +VV
Sbjct: 301 XDFXXLAART-GQERTAAELEPLFTAAGLRLDRVV 334
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 5 IPKADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASKQVIH 64
+P+AD+ + + H+W++ C +L+ Y G ++V E +L D +
Sbjct: 242 LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL----DEDRRGPLLTQ 297
Query: 65 IDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFK 97
+ + + T G+E T + L +AGF+ F+
Sbjct: 298 LYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 2 FVSIP-KADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASK 60
F +P KAD I + ++ NW + V+IL C EAL G++++ E L + S ++
Sbjct: 243 FEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHE--RDDLHENSF-NE 299
Query: 61 QVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGF 93
Q +D ML GG T + + LA +AG
Sbjct: 300 QFTELDLRMLVF-LGGALRTREKWDGLAASAGL 331
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 2 FVSIP-KADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAE 46
F +P ADV+ + ++ NWS+E + IL+ C AL G+++V +
Sbjct: 242 FKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 2 FVSIP-KADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAE 46
F +P ADV+ + ++ NWS+E + IL+ C AL G+++V +
Sbjct: 242 FKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 2 FVSIPK-ADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASK 60
F +IP ADV +K + H+W ++ V+IL+ A + +++V + ++ P S
Sbjct: 262 FETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDSRLLVIDNLIDERPAASTLFV 321
Query: 61 QVIHIDCIMLAHTTGGREMTEQDFKTLAKAAGFQGFKVV-CSAFSTYIME 109
+ +L GG E +E +F L + +G + + + C A I+E
Sbjct: 322 DL------LLLVLVGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVE 365
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 1 MFVSIP-KADVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAE 46
M +P D+ + I + E A +++L NC EA+ +G+V+V E
Sbjct: 226 MLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 16 ICHNWSEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASKQVIHIDCIMLAHTTG 75
+ H+W + + V IL+ C EA G V+V E V D + +D ML + G
Sbjct: 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA---VAGDEHAGTG----MDLRMLTY-FG 295
Query: 76 GREMTEQDFKTLAKAAGF 93
G+E + + LA AG
Sbjct: 296 GKERSLAELGELAAQAGL 313
>pdb|3BWH|A Chain A, Atomic Resolution Structure Of Cucurmosin, A Novel Type
1 Rip From The Sarcocarp Of Cucurbita Moschata
Length = 245
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 29 LKNCYEALPENGKVIVAECILPVLPDPSLASKQVIHIDCI 68
+KN EALP++GKV +PVL + S++ I ID +
Sbjct: 18 IKNLREALPKDGKV----YDIPVLLSTVMDSRRFILIDLV 53
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 9 DVIFMKWICHNWSEEACVKILKNCYEALPENGKVIV------AECILPVLPDPSLASKQV 62
D++ + H++ C ++L+ AL GKVIV ++ I P PD + S
Sbjct: 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP--PDAAAFS--- 288
Query: 63 IHIDCIMLAHTTGGREMTEQDFKTLAKAAGF 93
+ LA T G T ++++ AGF
Sbjct: 289 ----LVXLATTPNGDAYTFAEYESXFSNAGF 315
>pdb|2EX4|A Chain A, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
pdb|2EX4|B Chain B, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
Length = 241
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 9/38 (23%), Positives = 24/38 (63%)
Query: 9 DVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAE 46
DVI+++W+ + +++ + L+ C +L NG +++ +
Sbjct: 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185
>pdb|1XTP|A Chain A, Structural Analysis Of Leishmania Major Lmaj004091aaa, A
Sam-dependent Methyltransferase Of The Duf858/pfam05891
Family
Length = 254
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 9 DVIFMKWICHNWSEEACVKILKNCYEALPENGKVIVAE 46
D+I ++W ++ VK K+C +AL NG + E
Sbjct: 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197
>pdb|3BPN|C Chain C, Crystal Structure Of The Il4-Il4r-Il13ra Ternary Complex
pdb|3BPO|C Chain C, Crystal Structure Of The Il13-Il4r-Il13ra Ternary Complex
Length = 314
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 21 SEEACVKILKNCYEALPENGKVIVAECILPVLPDPSLASKQVIHIDCI 68
+E C+++ C E ++V +CI P DP A V + CI
Sbjct: 63 NERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESA---VTELQCI 107
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,582,002
Number of Sequences: 62578
Number of extensions: 129083
Number of successful extensions: 379
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 348
Number of HSP's gapped (non-prelim): 25
length of query: 114
length of database: 14,973,337
effective HSP length: 77
effective length of query: 37
effective length of database: 10,154,831
effective search space: 375728747
effective search space used: 375728747
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)