Query 048713
Match_columns 324
No_of_seqs 278 out of 894
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 21:34:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048713.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048713hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 3.1E-29 1.1E-33 235.8 12.9 195 2-215 22-238 (280)
2 1qg8_A Protein (spore coat pol 86.0 2 6.7E-05 37.2 7.4 95 83-179 88-201 (255)
3 2c0n_A A197; thermophil protei 79.7 1.7 5.8E-05 38.4 4.3 110 81-193 51-176 (203)
4 4fix_A UDP-galactofuranosyl tr 75.3 2.3 7.7E-05 43.8 4.4 98 83-186 268-410 (657)
5 4hg6_A Cellulose synthase subu 73.3 5.3 0.00018 41.9 6.7 94 83-184 238-359 (802)
6 2z86_A Chondroitin synthase; G 70.0 5 0.00017 40.0 5.5 98 83-185 174-322 (625)
7 1xhb_A Polypeptide N-acetylgal 68.8 3 0.0001 40.1 3.4 97 83-184 114-249 (472)
8 3bcv_A Putative glycosyltransf 67.6 3.7 0.00013 34.9 3.4 97 83-183 84-215 (240)
9 2d7i_A Polypeptide N-acetylgal 64.4 3.4 0.00012 41.3 2.9 98 83-185 196-330 (570)
10 2ffu_A Ppgalnact-2, polypeptid 61.1 5.5 0.00019 38.8 3.6 47 135-186 236-283 (501)
11 2bo4_A Mannosylglycerate synth 38.6 75 0.0026 30.4 7.5 99 83-184 92-208 (397)
12 2p6w_A VP54, putative glycosyl 36.9 31 0.0011 30.3 4.0 46 72-118 62-110 (213)
13 2z86_A Chondroitin synthase; G 34.1 24 0.00082 35.0 3.3 91 83-179 454-559 (625)
14 3l7i_A Teichoic acid biosynthe 26.3 14 0.00048 37.9 0.0 91 83-179 83-191 (729)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.96 E-value=3.1e-29 Score=235.76 Aligned_cols=195 Identities=19% Similarity=0.225 Sum_probs=133.5
Q ss_pred cccchhhhhhhhhhccCCC-CcccEEEeccccccccccCCCCCCCCCeE----ecCCCCCc-ccccCchhHHHHHHHHHH
Q 048713 2 SAATWHDRTRYINLWWKPN-RTRGFVWLDEEPREKNRASSTIANTIPYR----VSDPGWTR-FRYSSSRSAVRIARIIWD 75 (324)
Q Consensus 2 ~~~~w~~r~~~~~~ww~~~-~~r~~v~~~~~~~~~~~~~~~~~~~lP~~----~~s~~~~~-f~~~g~~~a~r~~~iv~~ 75 (324)
+++.|+.|+++|+.||.+. ..+.|||.|.+... +|++ .+..+.+. ....++. .|+..++..
T Consensus 22 ~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~-----------l~~~~~~~~~~~~~~~~~~~~~l~--~K~~~~~~~ 88 (280)
T 2j0a_A 22 TWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDER-----------LQERLGPHLVVTQCSAEHSHPALS--CKMAAEFDA 88 (280)
T ss_dssp CGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHH-----------HHHHHGGGEEECCC-------CCC--HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhccCCCceEEEcCCCccc-----------ccccccccceeccccccccccchH--HHHHHHHHH
Confidence 5677999999999999874 36788898875322 2221 11112111 0112332 366666664
Q ss_pred HHHhcCCCccEEEEEcCCeeeeHHHHHHHhhcCCCCCCEEEeecccccccc----------ccccccccccceeEEEcHH
Q 048713 76 SFKLNLPNVRWFVMGDDDTVFFTDNLLSVLTRYDHNQMWYIGCNSESVEQN----------VMHAYDMAFGGGGFAVSYP 145 (324)
Q Consensus 76 ~~~~~~p~~~Wfv~~DDDTf~~~~nL~~~Ls~yD~~~p~yIG~~se~~~~~----------~~~~~~fa~GGaGivLSr~ 145 (324)
.. .+++|||+++||||||+++||+++|++||+++++|||.+++..... ...++.||+||||||||++
T Consensus 89 ~l---~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~~y~~GGaG~vlSr~ 165 (280)
T 2j0a_A 89 FL---VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFATGGAGFCINRQ 165 (280)
T ss_dssp HH---HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------CCEECGGGCEEEEHH
T ss_pred Hh---CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCccccccccccCcccCCCEEEECHH
Confidence 33 3699999999999999999999999999999999999998654211 1124569999999999999
Q ss_pred HHHHHHHHhhhhhh--hh-ccCCcchHHHHHHHH-HhCCceecCCCCcccccC-CCCCC-CCCCCCCCCeeeeccc
Q 048713 146 LAEKLVNALDGCLE--RY-YYFYGSDQRIWACIS-EIGVSLTPERGFHQLDIR-GDPYG-LLGAHPIAPLVTLHHI 215 (324)
Q Consensus 146 ll~~L~~~~~~C~~--~~-~~~~~~D~~Lg~Cl~-~~GV~lt~~~gfhQ~d~~-gd~~g-~~~~~~~~P~iSlHH~ 215 (324)
||++|.+..+.|.- .. .....+|+.||+||+ ++||+++++++|||.... ++..+ .+.. +..+|+|.+
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~---~~~~s~~~~ 238 (280)
T 2j0a_A 166 LALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPE---QVTLSYGVF 238 (280)
T ss_dssp HHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGG---CSEEECEEE
T ss_pred HHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhcc---Ccceecccc
Confidence 99999987666611 00 013468999999999 899999999999997643 22222 2222 455899943
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=86.03 E-value=2 Score=37.19 Aligned_cols=95 Identities=14% Similarity=0.237 Sum_probs=56.1
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcC--CCCCCEEEeecc-----ccccc---------cccccccccccceeEEEcHHH
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRY--DHNQMWYIGCNS-----ESVEQ---------NVMHAYDMAFGGGGFAVSYPL 146 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~y--D~~~p~yIG~~s-----e~~~~---------~~~~~~~fa~GGaGivLSr~l 146 (324)
..+|++++|+|+++.++.|.+++..+ +++-.+..|... +.... ...........|+++++.+.+
T Consensus 88 ~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~ 167 (255)
T 1qg8_A 88 EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYSV 167 (255)
T ss_dssp CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETHH
T ss_pred CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhcCCCccceEEEEHHH
Confidence 67999999999999987777776655 334444444321 11000 000011133578899999999
Q ss_pred HHHHHHHhhhh---hhhhccCCcchHHHHHHHHHhC
Q 048713 147 AEKLVNALDGC---LERYYYFYGSDQRIWACISEIG 179 (324)
Q Consensus 147 l~~L~~~~~~C---~~~~~~~~~~D~~Lg~Cl~~~G 179 (324)
++++...+... ...+ ..++|..+...+...|
T Consensus 168 ~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g 201 (255)
T 1qg8_A 168 LEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY 201 (255)
T ss_dssp HHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC
T ss_pred HHhhcccccccccCCccc--chHHHHHHHHHHHHhC
Confidence 99986333100 0111 2468988877776655
No 3
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=79.72 E-value=1.7 Score=38.41 Aligned_cols=110 Identities=11% Similarity=0.051 Sum_probs=65.5
Q ss_pred CCCccEEEEEcCC---eeeeHHHHHHHhhcCCCCCCEEEeeccccc----------ccccccccccccccee-EEEcHHH
Q 048713 81 LPNVRWFVMGDDD---TVFFTDNLLSVLTRYDHNQMWYIGCNSESV----------EQNVMHAYDMAFGGGG-FAVSYPL 146 (324)
Q Consensus 81 ~p~~~Wfv~~DDD---Tf~~~~nL~~~Ls~yD~~~p~yIG~~se~~----------~~~~~~~~~fa~GGaG-ivLSr~l 146 (324)
..++++++++|.| .-|.++.+.++|.. ..++.+|...-.. ......+....+.|.| .+++|++
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR~V 127 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYLKTLRGYSVYRKDWEKEIFDGEVNGCGLGFTFIKREF 127 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBCTTSSSBSEESSSBCSSCCCEECSEECSSEEEEEHHH
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeeccCCCccchHHHHHHHhccCceeeeccccEEEEhHHH
Confidence 5689999999999 99999999999944 7788888863211 0001112234567788 4789999
Q ss_pred HHHHHHH-hhh-hhhhhccCCcchHHHHHHHHHhCCceecCCCCccccc
Q 048713 147 AEKLVNA-LDG-CLERYYYFYGSDQRIWACISEIGVSLTPERGFHQLDI 193 (324)
Q Consensus 147 l~~L~~~-~~~-C~~~~~~~~~~D~~Lg~Cl~~~GV~lt~~~gfhQ~d~ 193 (324)
+++|... +-. -.++-.+.+++|+..-.-++..|-.+.....+|-.|.
T Consensus 128 ~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~~ 176 (203)
T 2c0n_A 128 LEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLKAYHFIDE 176 (203)
T ss_dssp HTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEEEEEEESSS
T ss_pred HHHHhhhhhhcCChhhhccccCCceEEEeccccccccccccccceeecc
Confidence 9998542 200 0111123467887665544545544543444555544
No 4
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=75.34 E-value=2.3 Score=43.79 Aligned_cols=98 Identities=18% Similarity=0.141 Sum_probs=59.8
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcCCC-CCCEEEeecc----ccc-cc-----------------c-------------
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRYDH-NQMWYIGCNS----ESV-EQ-----------------N------------- 126 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~yD~-~~p~yIG~~s----e~~-~~-----------------~------------- 126 (324)
+.+|++++|||+.+.++.|.++++.++. .+...+|... +.. .+ .
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 6899999999999998877777765432 2334555321 000 00 0
Q ss_pred -------cccc-cc-ccccceeEEEcHHHHHHHHHHhhhhhhhhccCCcchHHHHHHHHHhCCceecCC
Q 048713 127 -------VMHA-YD-MAFGGGGFAVSYPLAEKLVNALDGCLERYYYFYGSDQRIWACISEIGVSLTPER 186 (324)
Q Consensus 127 -------~~~~-~~-fa~GGaGivLSr~ll~~L~~~~~~C~~~~~~~~~~D~~Lg~Cl~~~GV~lt~~~ 186 (324)
.... .. ...+|+++++.+.+++++-.. + +.+ ...+|..++.=+.+.|.++...|
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgf-d---~~F--~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQP-L---PLF--IKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSC-C---SCS--SSSHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCCC-h---hHh--ccCcHHHHHHHHHHcCCeEEEEC
Confidence 0000 00 124789999999999987432 2 111 24589999888888887654443
No 5
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=73.26 E-value=5.3 Score=41.85 Aligned_cols=94 Identities=14% Similarity=-0.033 Sum_probs=60.8
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcC--CCCCCEEEeecccccc-------------cc---c----------ccccccc
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRY--DHNQMWYIGCNSESVE-------------QN---V----------MHAYDMA 134 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~y--D~~~p~yIG~~se~~~-------------~~---~----------~~~~~fa 134 (324)
+.+|++++|+|+.+.++.|.+++..+ |++-...-|....... +. . ..+. ..
T Consensus 238 ~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 316 (802)
T 4hg6_A 238 KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGG-AF 316 (802)
T ss_dssp CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTC-CC
T ss_pred CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCC-ce
Confidence 67999999999999998888888776 5554444443211000 00 0 0011 23
Q ss_pred ccceeEEEcHHHHHHHHHHhhhhhhhhccCCcchHHHHHHHHHhCCceec
Q 048713 135 FGGGGFAVSYPLAEKLVNALDGCLERYYYFYGSDQRIWACISEIGVSLTP 184 (324)
Q Consensus 135 ~GGaGivLSr~ll~~L~~~~~~C~~~~~~~~~~D~~Lg~Cl~~~GV~lt~ 184 (324)
..|++.++.+.+++++... +. ...++|..++.-+.+.|.++..
T Consensus 317 ~~G~~~~~Rr~al~~vGgf-~~------~~~~ED~~l~~rl~~~G~ri~~ 359 (802)
T 4hg6_A 317 FCGSAAVLRRRALDEAGGF-AG------ETITEDAETALEIHSRGWKSLY 359 (802)
T ss_dssp CCSSSEEEEHHHHHHHTTC-CC------SSSSHHHHHHHHHHTTTCCEEE
T ss_pred ecccchhhhHHHHHHcCCc-CC------CCcchHHHHHHHHHHcCCeEEE
Confidence 4688899999999987422 11 1356999999999888865443
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=70.00 E-value=5 Score=40.02 Aligned_cols=98 Identities=13% Similarity=0.058 Sum_probs=59.4
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcCCC-CCCEEEeecccccccc-----------------------------------
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRYDH-NQMWYIGCNSESVEQN----------------------------------- 126 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~yD~-~~p~yIG~~se~~~~~----------------------------------- 126 (324)
..+|++++|+|+.+..+.|.+++..+.. .....+|.........
T Consensus 174 ~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (625)
T 2z86_A 174 KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSV 253 (625)
T ss_dssp CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CC
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCcc
Confidence 6799999999999998777777766542 2334445431000000
Q ss_pred -------------cccccc-ccccceeEEEcHHHHHHHHHHhhhhhhhhccCC-cchHHHHHHHHHhCCceecC
Q 048713 127 -------------VMHAYD-MAFGGGGFAVSYPLAEKLVNALDGCLERYYYFY-GSDQRIWACISEIGVSLTPE 185 (324)
Q Consensus 127 -------------~~~~~~-fa~GGaGivLSr~ll~~L~~~~~~C~~~~~~~~-~~D~~Lg~Cl~~~GV~lt~~ 185 (324)
...... ....|+++++++.+++++.. +++-.. .+ ++|..++.=+.+.|..+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGg-fde~~~----~~g~ED~dl~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 254 DWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGW-FDEEFT----HWGGEDNEFGYRLYREGCYFRSV 322 (625)
T ss_dssp CTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCC-CCTTCS----SCCCHHHHHHHHHHHTTCEEEEC
T ss_pred ccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCC-Cccccc----cCCcchhhhhhhHHhCCceEEEc
Confidence 000000 12578899999999998742 222111 22 58999888888888665443
No 7
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=68.81 E-value=3 Score=40.14 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=55.2
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcCCCCCCEEEe-ecc---ccccc--------------cccc---------------
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRYDHNQMWYIG-CNS---ESVEQ--------------NVMH--------------- 129 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~yD~~~p~yIG-~~s---e~~~~--------------~~~~--------------- 129 (324)
..+|++++|+|+.+.++-|..+|+.+.......++ ... +...+ ...+
T Consensus 114 ~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (472)
T 1xhb_A 114 RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKG 193 (472)
T ss_dssp CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTT
T ss_pred cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccC
Confidence 47999999999999987666666554322222222 110 00000 0000
Q ss_pred ----c-ccccccceeEEEcHHHHHHHHHHhhhhhhhhccCC-cchHHHHHHHHHhCCceec
Q 048713 130 ----A-YDMAFGGGGFAVSYPLAEKLVNALDGCLERYYYFY-GSDQRIWACISEIGVSLTP 184 (324)
Q Consensus 130 ----~-~~fa~GGaGivLSr~ll~~L~~~~~~C~~~~~~~~-~~D~~Lg~Cl~~~GV~lt~ 184 (324)
. ......|+.+++++.+++++-. +++-.. .+ ++|..+..=+.+.|.++..
T Consensus 194 ~~~~~~~~~~~~g~~~~irr~~~~~iGg-fde~~~----~~g~ED~dl~~R~~~~G~~i~~ 249 (472)
T 1xhb_A 194 DRTLPVRTPTMAGGLFSIDRDYFQEIGT-YDAGMD----IWGGENLEISFRIWQCGGTLEI 249 (472)
T ss_dssp CTTSCEECSBCCSSSEEEEHHHHHHTTS-CCTTSC----TTCCCCSHHHHHHHHTTCEEEE
T ss_pred CCCCcccCccccceeEEEEHHHHHHcCC-CCCccc----ccCchhHHHHHHHHhcCCeEEE
Confidence 0 0012457789999999988753 232121 12 5898888888888865543
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=67.64 E-value=3.7 Score=34.92 Aligned_cols=97 Identities=7% Similarity=-0.089 Sum_probs=52.8
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcCCC-CCCEEEeecc---ccc-----cc-----ccccc----------c-------
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRYDH-NQMWYIGCNS---ESV-----EQ-----NVMHA----------Y------- 131 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~yD~-~~p~yIG~~s---e~~-----~~-----~~~~~----------~------- 131 (324)
..+|++++|+|.++.++.|.+++..+.. ...+.+|... +.. .. ..... .
T Consensus 84 ~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (240)
T 3bcv_A 84 TGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYA 163 (240)
T ss_dssp CSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHH
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhh
Confidence 5699999999999998777766655432 3345544421 000 00 00000 0
Q ss_pred ----cccccceeEEEcHHHHHHHHHHhhhhhhhhccCCcchHHHHHHHHHhCCcee
Q 048713 132 ----DMAFGGGGFAVSYPLAEKLVNALDGCLERYYYFYGSDQRIWACISEIGVSLT 183 (324)
Q Consensus 132 ----~fa~GGaGivLSr~ll~~L~~~~~~C~~~~~~~~~~D~~Lg~Cl~~~GV~lt 183 (324)
.+...|++.++.+.+++++.-.+++-.. ..++|..+..=+...|.++.
T Consensus 164 ~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~----~~~eD~~~~~r~~~~g~~i~ 215 (240)
T 3bcv_A 164 REERAIQVSAKVVLYRRNLIEKKHLRFVSERI----LPSEDLIFNVDVLANSNIVC 215 (240)
T ss_dssp HHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTT----CTTHHHHHHHHHHTTCSCEE
T ss_pred ccccccccchhheeeeHHHHHHcCCccCCCCC----ccCCCHHHHHHHHHhCCEEE
Confidence 0112467889999998885312222110 13589888776666665543
No 9
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=64.43 E-value=3.4 Score=41.34 Aligned_cols=98 Identities=17% Similarity=0.088 Sum_probs=56.6
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcCCCCCCEEEeecc---------------cccccccc---------------c---
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRYDHNQMWYIGCNS---------------ESVEQNVM---------------H--- 129 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~yD~~~p~yIG~~s---------------e~~~~~~~---------------~--- 129 (324)
..+|++++|+|+.+.++-|..+|+.+.......+|... +....... .
T Consensus 196 ~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (570)
T 2d7i_A 196 TGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADP 275 (570)
T ss_dssp CSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSST
T ss_pred CCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCC
Confidence 46999999999999876555555544223333443210 00000000 0
Q ss_pred c---ccccccceeEEEcHHHHHHHHHHhhhhhhhhccCC-cchHHHHHHHHHhCCceecC
Q 048713 130 A---YDMAFGGGGFAVSYPLAEKLVNALDGCLERYYYFY-GSDQRIWACISEIGVSLTPE 185 (324)
Q Consensus 130 ~---~~fa~GGaGivLSr~ll~~L~~~~~~C~~~~~~~~-~~D~~Lg~Cl~~~GV~lt~~ 185 (324)
. ......|+.+++++.+++++-. +++-.. .+ ++|..|..-+.+.|.++...
T Consensus 276 ~~~~~~~~~~g~~~~irr~~~~~iGg-fDe~~~----~~g~ED~dl~~Rl~~~G~~i~~~ 330 (570)
T 2d7i_A 276 SDPFESPVMAGGLFAVDRKWFWELGG-YDPGLE----IWGGEQYEISFKVWMCGGRMEDI 330 (570)
T ss_dssp TSCEECSSCCSSSEEEEHHHHHHTTS-SCTTCC----SSSSHHHHHHHHHHHTTCEEEEE
T ss_pred CcceecccccceEEEEEHHHHHhcCC-CCCccc----ccCcchHHHHHHHHhCCCeEEEc
Confidence 0 0012358889999999998743 333121 22 68999988888888665443
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=61.08 E-value=5.5 Score=38.81 Aligned_cols=47 Identities=23% Similarity=0.251 Sum_probs=31.5
Q ss_pred ccceeEEEcHHHHHHHHHHhhhhhhhhccCC-cchHHHHHHHHHhCCceecCC
Q 048713 135 FGGGGFAVSYPLAEKLVNALDGCLERYYYFY-GSDQRIWACISEIGVSLTPER 186 (324)
Q Consensus 135 ~GGaGivLSr~ll~~L~~~~~~C~~~~~~~~-~~D~~Lg~Cl~~~GV~lt~~~ 186 (324)
..|+.+++++.+++++.. +++-.. .+ ++|..|..=+.+.|.++...|
T Consensus 236 ~~g~~~~irr~~~~~iGg-fde~~~----~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 236 IAGGLFVMDKFYFEELGK-YDMMMD----VWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp CCSSSEEEEHHHHHHTTC-CCTTCC----SSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccceEEEEEHHHHHHhCC-CCcccc----ccCcchHHHHHHHHhcCCeEEEcc
Confidence 468889999999988752 232111 23 689888887777886554433
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=38.62 E-value=75 Score=30.36 Aligned_cols=99 Identities=16% Similarity=0.048 Sum_probs=58.9
Q ss_pred CccEEEEEcCCee-eeHHHHHHHhhcCCCCCCEEEeecccccccc-c--cc-------ccccc-------ccceeEEEcH
Q 048713 83 NVRWFVMGDDDTV-FFTDNLLSVLTRYDHNQMWYIGCNSESVEQN-V--MH-------AYDMA-------FGGGGFAVSY 144 (324)
Q Consensus 83 ~~~Wfv~~DDDTf-~~~~nL~~~Ls~yD~~~p~yIG~~se~~~~~-~--~~-------~~~fa-------~GGaGivLSr 144 (324)
+.+|++++|.|.- .+++-+.+++...+..-.+.+|......... . .. .+... ..+|-+++++
T Consensus 92 ~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~~~~i~dp~sG~~a~~R 171 (397)
T 2bo4_A 92 QWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQPLGGELLMRR 171 (397)
T ss_dssp CCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSCTTCCCEEEEH
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhhccccccCCcccEEEeH
Confidence 6799999999995 7877777777655444567888632110000 0 00 01110 0245579999
Q ss_pred HHHHHHHHHhhhhhhhhccCCcchHHHHHHHHHhCCceec
Q 048713 145 PLAEKLVNALDGCLERYYYFYGSDQRIWACISEIGVSLTP 184 (324)
Q Consensus 145 ~ll~~L~~~~~~C~~~~~~~~~~D~~Lg~Cl~~~GV~lt~ 184 (324)
.+++.+... +.-.....++-|..|-..+.+.|.++..
T Consensus 172 ~vl~~l~~~---~~~~~~~~fg~eiel~~~a~~~G~rI~E 208 (397)
T 2bo4_A 172 EVAAMLYED---ERVRRRSDWGIDTLYTFVTVQQGVSIYE 208 (397)
T ss_dssp HHHHHHHHC---HHHHTCCSTTHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHhhh---cccCcCCCcchHHHHHHHHHHcCCEEEE
Confidence 999988541 1100123467788888777777876654
No 12
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=36.89 E-value=31 Score=30.30 Aligned_cols=46 Identities=22% Similarity=0.381 Sum_probs=33.9
Q ss_pred HHHHHHHhcCCCccEEEEEcCCeeeeHHHHHHHhhcC---CCCCCEEEee
Q 048713 72 IIWDSFKLNLPNVRWFVMGDDDTVFFTDNLLSVLTRY---DHNQMWYIGC 118 (324)
Q Consensus 72 iv~~~~~~~~p~~~Wfv~~DDDTf~~~~nL~~~Ls~y---D~~~p~yIG~ 118 (324)
+++++-.. .|+++||.-.|-|++|--.+...-|.+| +...-++-|-
T Consensus 62 ~IR~AM~k-hPeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw 110 (213)
T 2p6w_A 62 IIQQAAEK-FPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTF 110 (213)
T ss_dssp HHHHHHHH-CTTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEE
T ss_pred HHHHHHHH-CCCceEEEEecCCceeecCCCCCcHHHccccccCceeeccc
Confidence 67777755 8999999999999999976766667777 3333355454
No 13
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=34.08 E-value=24 Score=35.03 Aligned_cols=91 Identities=11% Similarity=-0.005 Sum_probs=50.8
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcC--CCCCCEEEeecc---ccc-cccc-----ccc----ccccccceeEEEcHHHH
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRY--DHNQMWYIGCNS---ESV-EQNV-----MHA----YDMAFGGGGFAVSYPLA 147 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~y--D~~~p~yIG~~s---e~~-~~~~-----~~~----~~fa~GGaGivLSr~ll 147 (324)
..+|++++|+|.++.++.|.+++..+ ++.-.+..|... +.. .... ... ..-...|++.++.+.++
T Consensus 454 ~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 533 (625)
T 2z86_A 454 RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAW 533 (625)
T ss_dssp CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHH
T ss_pred CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHH
Confidence 56999999999999988888777655 344333333211 100 0000 000 00123567788888876
Q ss_pred HHHHHHhhhhhhhhccCCcchHHHHHHHHHhC
Q 048713 148 EKLVNALDGCLERYYYFYGSDQRIWACISEIG 179 (324)
Q Consensus 148 ~~L~~~~~~C~~~~~~~~~~D~~Lg~Cl~~~G 179 (324)
+++.. +++ .+ ..++|..+..-+.+.|
T Consensus 534 ~~~gg-fd~---~~--~~~eD~dl~~r~~~~g 559 (625)
T 2z86_A 534 NLTEG-FNE---SI--SNAVDYDMYLKLSEVG 559 (625)
T ss_dssp TTTTC-CCS---SC--SSCHHHHHHHHHTTTS
T ss_pred HHhCC-CCC---cc--CChHHHHHHHHHHHhC
Confidence 65432 221 11 2458888876666666
No 14
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=26.27 E-value=14 Score=37.86 Aligned_cols=91 Identities=10% Similarity=-0.021 Sum_probs=0.0
Q ss_pred CccEEEEEcCCeeeeHHHHHHHhhcCCCCCCEEEeeccccccc--------c---------ccc-cccccccceeEEEcH
Q 048713 83 NVRWFVMGDDDTVFFTDNLLSVLTRYDHNQMWYIGCNSESVEQ--------N---------VMH-AYDMAFGGGGFAVSY 144 (324)
Q Consensus 83 ~~~Wfv~~DDDTf~~~~nL~~~Ls~yD~~~p~yIG~~se~~~~--------~---------~~~-~~~fa~GGaGivLSr 144 (324)
.-+|++++|+|.++.++.|.+++..++ +..+.+|........ . ... .......|++.++.+
T Consensus 83 ~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr 161 (729)
T 3l7i_A 83 ETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAKENINSFLRKQSACNIIFRT 161 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEeeEEeecCCCccccccceeeeeecchhhHHHHhhccchhheeeeH
Confidence 568999999999999888888888777 445555543110000 0 000 000123566788888
Q ss_pred HHHHHHHHHhhhhhhhhccCCcchHHHHHHHHHhC
Q 048713 145 PLAEKLVNALDGCLERYYYFYGSDQRIWACISEIG 179 (324)
Q Consensus 145 ~ll~~L~~~~~~C~~~~~~~~~~D~~Lg~Cl~~~G 179 (324)
.+++++.-.+++-. ..++|..+..-+...|
T Consensus 162 ~~l~~~gl~fde~~-----~~~ED~d~~~rl~~~g 191 (729)
T 3l7i_A 162 AIVRAHHIRFNENL-----NTYVDWSFVLEYMKYV 191 (729)
T ss_dssp -----------------------------------
T ss_pred HHHHHcCCCcCCCC-----CcccCHHHHHHHHHhc
Confidence 88887542233211 1357776665555444
Done!